Query psy11784
Match_columns 284
No_of_seqs 277 out of 1834
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 18:53:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 100.0 2.9E-59 9.9E-64 438.3 29.4 264 1-267 135-454 (456)
2 4e3q_A Pyruvate transaminase; 100.0 1.3E-57 4.6E-62 428.6 28.6 266 1-270 138-470 (473)
3 4ao9_A Beta-phenylalanine amin 100.0 2.7E-51 9.3E-56 383.2 26.4 237 1-268 153-446 (454)
4 3i5t_A Aminotransferase; pyrid 100.0 2E-46 6.9E-51 353.9 31.3 266 1-271 124-457 (476)
5 4a0g_A Adenosylmethionine-8-am 100.0 3.4E-47 1.2E-51 378.9 21.4 264 1-268 452-828 (831)
6 3hmu_A Aminotransferase, class 100.0 3.8E-46 1.3E-50 351.7 26.7 264 1-270 126-454 (472)
7 4ffc_A 4-aminobutyrate aminotr 100.0 3.2E-45 1.1E-49 343.6 28.5 266 1-269 135-450 (453)
8 3oks_A 4-aminobutyrate transam 100.0 8.2E-45 2.8E-49 340.5 26.8 265 1-266 132-449 (451)
9 3gju_A Putative aminotransfera 100.0 3E-43 1E-47 330.4 29.9 267 1-269 122-457 (460)
10 3n5m_A Adenosylmethionine-8-am 100.0 7.9E-43 2.7E-47 326.6 28.5 265 1-267 117-451 (452)
11 4a6r_A Omega transaminase; tra 100.0 8.3E-43 2.8E-47 327.4 27.7 265 1-270 121-451 (459)
12 3dod_A Adenosylmethionine-8-am 100.0 3E-42 1E-46 322.5 28.2 264 1-269 114-444 (448)
13 3tfu_A Adenosylmethionine-8-am 100.0 2.2E-42 7.4E-47 324.8 25.7 253 1-268 145-453 (457)
14 1zod_A DGD, 2,2-dialkylglycine 100.0 4.4E-39 1.5E-43 299.1 27.6 267 1-268 112-432 (433)
15 1z7d_A Ornithine aminotransfer 100.0 1.3E-38 4.3E-43 297.0 26.7 247 1-269 132-430 (433)
16 2oat_A Ornithine aminotransfer 100.0 2.5E-38 8.5E-43 295.6 26.0 245 1-267 143-438 (439)
17 3l44_A Glutamate-1-semialdehyd 100.0 1.2E-38 4.3E-43 296.3 23.0 255 1-270 121-432 (434)
18 3i4j_A Aminotransferase, class 100.0 5.7E-38 2E-42 291.5 26.3 258 1-268 99-428 (430)
19 3dxv_A Alpha-amino-epsilon-cap 100.0 5.1E-38 1.8E-42 292.6 25.2 262 1-270 114-427 (439)
20 4e77_A Glutamate-1-semialdehyd 100.0 3E-38 1E-42 293.4 23.1 252 1-267 119-428 (429)
21 1ohv_A 4-aminobutyrate aminotr 100.0 3.9E-38 1.3E-42 297.0 23.4 256 1-268 137-471 (472)
22 2cjg_A L-lysine-epsilon aminot 100.0 1.4E-37 4.7E-42 291.3 25.2 256 1-268 129-448 (449)
23 3k28_A Glutamate-1-semialdehyd 100.0 3.9E-38 1.3E-42 292.8 20.1 252 1-268 119-427 (429)
24 3nx3_A Acoat, acetylornithine 100.0 4.9E-37 1.7E-41 281.9 25.5 243 1-267 103-394 (395)
25 3fq8_A Glutamate-1-semialdehyd 100.0 1.2E-37 4.1E-42 289.1 21.6 252 1-267 118-426 (427)
26 2yky_A Beta-transaminase; tran 100.0 1.3E-40 4.5E-45 312.5 0.0 237 1-268 166-460 (465)
27 2pb2_A Acetylornithine/succiny 100.0 2E-36 6.8E-41 280.9 25.9 245 1-268 124-418 (420)
28 2epj_A Glutamate-1-semialdehyd 100.0 9.9E-37 3.4E-41 283.6 21.6 250 1-269 122-432 (434)
29 3a8u_X Omega-amino acid--pyruv 100.0 6.4E-36 2.2E-40 279.3 25.9 264 1-268 120-447 (449)
30 2eo5_A 419AA long hypothetical 100.0 4.9E-35 1.7E-39 271.3 26.2 261 1-268 114-418 (419)
31 2e7u_A Glutamate-1-semialdehyd 100.0 2E-35 7E-40 274.0 19.9 244 1-264 118-423 (424)
32 1s0a_A Adenosylmethionine-8-am 100.0 9.2E-34 3.1E-38 263.1 25.9 256 1-268 113-424 (429)
33 2cy8_A D-phgat, D-phenylglycin 100.0 4.9E-34 1.7E-38 267.0 20.6 249 1-270 123-437 (453)
34 1sff_A 4-aminobutyrate aminotr 100.0 8.2E-33 2.8E-37 255.8 28.4 260 1-268 112-424 (426)
35 3ruy_A Ornithine aminotransfer 100.0 1.5E-32 5.1E-37 251.6 26.0 239 1-265 103-391 (392)
36 4adb_A Succinylornithine trans 100.0 1.5E-32 5.3E-37 252.2 26.2 247 1-270 106-402 (406)
37 2ord_A Acoat, acetylornithine 100.0 5.7E-30 2E-34 234.9 22.8 242 1-267 107-396 (397)
38 1vef_A Acetylornithine/acetyl- 100.0 1.4E-28 4.7E-33 225.4 24.5 239 1-265 114-394 (395)
39 2eh6_A Acoat, acetylornithine 100.0 3E-28 1E-32 221.3 23.7 238 1-264 96-374 (375)
40 3l8a_A METC, putative aminotra 99.9 8.2E-25 2.8E-29 202.4 18.7 239 1-266 129-420 (421)
41 2w8t_A SPT, serine palmitoyltr 99.9 3E-23 1E-27 192.4 23.9 230 2-270 135-417 (427)
42 3kki_A CAI-1 autoinducer synth 99.9 1.8E-22 6E-27 185.8 22.7 180 77-267 175-403 (409)
43 3tqx_A 2-amino-3-ketobutyrate 99.9 3.5E-22 1.2E-26 182.4 22.6 184 77-268 159-396 (399)
44 3piu_A 1-aminocyclopropane-1-c 99.9 2.5E-21 8.7E-26 179.6 25.3 245 1-269 121-433 (435)
45 3dzz_A Putative pyridoxal 5'-p 99.9 5.1E-21 1.7E-25 174.2 22.3 241 1-268 95-389 (391)
46 1iay_A ACC synthase 2, 1-amino 99.9 2E-20 6.9E-25 173.0 26.2 243 1-267 118-426 (428)
47 3op7_A Aminotransferase class 99.9 3.2E-21 1.1E-25 175.0 19.6 238 1-269 91-372 (375)
48 1fc4_A 2-amino-3-ketobutyrate 99.9 9.8E-21 3.3E-25 173.3 22.9 184 77-268 161-397 (401)
49 3aow_A Putative uncharacterize 99.9 1.5E-20 5.1E-25 175.7 24.3 240 1-269 150-446 (448)
50 1yiz_A Kynurenine aminotransfe 99.9 4.6E-21 1.6E-25 177.3 20.0 239 1-266 111-427 (429)
51 3nra_A Aspartate aminotransfer 99.9 1.4E-20 4.7E-25 172.4 22.2 186 77-268 169-405 (407)
52 2zc0_A Alanine glyoxylate tran 99.9 2.7E-20 9.4E-25 170.7 22.8 240 1-269 108-405 (407)
53 1bs0_A Protein (8-amino-7-oxon 99.9 3.6E-20 1.2E-24 168.6 22.9 225 1-264 109-383 (384)
54 3a2b_A Serine palmitoyltransfe 99.9 4.5E-20 1.6E-24 168.9 23.7 182 77-268 159-392 (398)
55 1v2d_A Glutamine aminotransfer 99.9 6.8E-21 2.3E-25 173.4 18.0 238 1-275 88-378 (381)
56 1j32_A Aspartate aminotransfer 99.9 2.7E-20 9.1E-25 169.7 21.7 239 1-268 100-387 (388)
57 4dq6_A Putative pyridoxal phos 99.9 2.2E-20 7.7E-25 169.9 19.5 237 1-265 100-390 (391)
58 1vp4_A Aminotransferase, putat 99.9 2.9E-20 9.9E-25 172.0 20.4 242 1-271 119-421 (425)
59 3kax_A Aminotransferase, class 99.9 5.9E-20 2E-24 166.7 21.7 237 1-265 92-382 (383)
60 2dou_A Probable N-succinyldiam 99.9 1.7E-20 5.9E-25 170.4 17.8 233 1-265 97-375 (376)
61 1gd9_A Aspartate aminotransfer 99.9 4.7E-20 1.6E-24 168.1 20.7 239 1-268 97-386 (389)
62 1c7n_A Cystalysin; transferase 99.8 8E-20 2.7E-24 167.1 21.5 242 1-269 99-394 (399)
63 2zyj_A Alpha-aminodipate amino 99.8 1.1E-19 3.6E-24 166.5 22.2 238 1-269 101-394 (397)
64 2x5d_A Probable aminotransfera 99.8 3.8E-20 1.3E-24 170.4 19.1 239 1-269 109-399 (412)
65 3fvs_A Kynurenine--oxoglutarat 99.8 6.9E-20 2.3E-24 168.8 20.8 240 1-267 101-421 (422)
66 3fdb_A Beta C-S lyase, putativ 99.8 3.7E-20 1.3E-24 167.8 18.0 233 1-267 91-375 (377)
67 3h14_A Aminotransferase, class 99.8 9.3E-20 3.2E-24 166.4 20.4 237 2-270 102-384 (391)
68 3dyd_A Tyrosine aminotransfera 99.8 9.8E-20 3.4E-24 168.7 20.6 240 1-269 128-425 (427)
69 2o0r_A RV0858C (N-succinyldiam 99.8 4E-20 1.4E-24 170.1 17.4 242 1-270 96-398 (411)
70 3b46_A Aminotransferase BNA3; 99.8 6.9E-20 2.4E-24 170.8 18.8 236 1-263 128-442 (447)
71 1u08_A Hypothetical aminotrans 99.8 1.2E-19 3.9E-24 165.5 19.8 232 1-263 101-385 (386)
72 2o1b_A Aminotransferase, class 99.8 4E-20 1.4E-24 170.1 16.6 236 1-267 119-402 (404)
73 3ezs_A Aminotransferase ASPB; 99.8 4.8E-20 1.6E-24 167.2 16.6 232 1-267 92-374 (376)
74 3ele_A Amino transferase; RER0 99.8 3.9E-19 1.3E-23 162.5 22.8 237 2-269 110-397 (398)
75 2gb3_A Aspartate aminotransfer 99.8 2E-19 6.7E-24 165.5 20.7 234 1-270 112-404 (409)
76 2z61_A Probable aspartate amin 99.8 1.9E-19 6.3E-24 163.2 20.1 221 1-266 99-369 (370)
77 1o4s_A Aspartate aminotransfer 99.8 3.5E-19 1.2E-23 162.8 21.9 233 1-266 111-387 (389)
78 3euc_A Histidinol-phosphate am 99.8 5.8E-19 2E-23 159.6 22.8 228 2-265 96-365 (367)
79 1xi9_A Putative transaminase; 99.8 1.2E-19 4.1E-24 166.7 18.5 238 1-268 111-403 (406)
80 3jtx_A Aminotransferase; NP_28 99.8 1.2E-19 4.2E-24 165.6 18.2 235 1-265 101-395 (396)
81 2r2n_A Kynurenine/alpha-aminoa 99.8 6.7E-19 2.3E-23 162.9 23.2 189 77-268 168-424 (425)
82 1lc5_A COBD, L-threonine-O-3-p 99.8 2.9E-19 9.9E-24 161.7 20.3 231 1-268 86-360 (364)
83 3cq5_A Histidinol-phosphate am 99.8 7E-19 2.4E-23 159.6 22.8 226 2-266 103-366 (369)
84 3ffh_A Histidinol-phosphate am 99.8 6.1E-19 2.1E-23 159.3 22.2 226 1-264 94-362 (363)
85 3kgw_A Alanine-glyoxylate amin 99.8 3.2E-19 1.1E-23 162.1 20.3 232 1-269 84-389 (393)
86 1d2f_A MALY protein; aminotran 99.8 6E-19 2.1E-23 161.0 21.9 238 2-268 98-389 (390)
87 2bwn_A 5-aminolevulinate synth 99.8 1.3E-18 4.6E-23 159.2 24.2 181 77-267 164-399 (401)
88 3f9t_A TDC, L-tyrosine decarbo 99.8 1E-18 3.5E-23 158.6 22.7 231 1-266 96-396 (397)
89 3ftb_A Histidinol-phosphate am 99.8 1.2E-18 4E-23 157.0 21.0 225 2-266 89-359 (361)
90 3zrp_A Serine-pyruvate aminotr 99.8 1.9E-18 6.6E-23 156.4 21.4 230 2-270 65-365 (384)
91 3e2y_A Kynurenine-oxoglutarate 99.8 1.2E-18 4.2E-23 159.6 20.3 236 1-263 95-408 (410)
92 1fg7_A Histidinol phosphate am 99.8 2.2E-18 7.4E-23 155.9 21.6 225 1-263 85-353 (356)
93 1ajs_A Aspartate aminotransfer 99.8 4.6E-19 1.6E-23 162.8 17.3 234 1-268 109-411 (412)
94 3nnk_A Ureidoglycine-glyoxylat 99.8 1.7E-18 6E-23 158.4 20.2 232 1-269 74-391 (411)
95 3f0h_A Aminotransferase; RER07 99.8 1.1E-18 3.8E-23 158.0 18.8 229 1-266 81-372 (376)
96 2dr1_A PH1308 protein, 386AA l 99.8 1.1E-17 3.8E-22 151.6 25.1 233 1-269 81-380 (386)
97 2x5f_A Aspartate_tyrosine_phen 99.8 2.9E-18 1E-22 158.6 21.6 237 1-268 123-429 (430)
98 1ax4_A Tryptophanase; tryptoph 99.8 3.5E-18 1.2E-22 159.6 21.8 248 1-269 101-442 (467)
99 3ke3_A Putative serine-pyruvat 99.8 6.9E-19 2.3E-23 160.6 16.5 239 1-269 61-377 (379)
100 3mad_A Sphingosine-1-phosphate 99.8 2.5E-18 8.6E-23 163.0 19.3 237 1-270 170-471 (514)
101 2ay1_A Aroat, aromatic amino a 99.8 1.4E-18 4.6E-23 158.7 16.1 230 1-264 101-392 (394)
102 2dkj_A Serine hydroxymethyltra 99.8 2.8E-18 9.7E-23 157.0 18.1 232 1-267 95-387 (407)
103 1vjo_A Alanine--glyoxylate ami 99.8 8.2E-18 2.8E-22 153.3 20.9 228 1-265 95-392 (393)
104 3ly1_A Putative histidinol-pho 99.8 1.4E-17 4.8E-22 149.6 22.2 231 2-267 79-351 (354)
105 3qgu_A LL-diaminopimelate amin 99.8 3.7E-18 1.3E-22 158.7 19.0 174 89-267 208-439 (449)
106 3rq1_A Aminotransferase class 99.8 1.5E-17 5.2E-22 153.1 22.3 183 77-268 164-415 (418)
107 3g0t_A Putative aminotransfera 99.8 1.1E-17 3.9E-22 154.6 20.9 238 1-267 115-436 (437)
108 2q7w_A Aspartate aminotransfer 99.8 2E-18 7E-23 157.5 15.6 229 1-264 104-395 (396)
109 1bw0_A TAT, protein (tyrosine 99.8 2E-17 6.9E-22 152.1 21.3 239 1-269 114-414 (416)
110 3b1d_A Betac-S lyase; HET: PLP 99.6 1.4E-20 4.9E-25 172.1 0.0 185 77-266 153-391 (392)
111 1elu_A L-cysteine/L-cystine C- 99.8 4.1E-18 1.4E-22 154.7 16.3 227 1-263 86-387 (390)
112 1kmj_A Selenocysteine lyase; p 99.8 1.8E-17 6E-22 151.2 20.0 230 1-268 95-405 (406)
113 3lvm_A Cysteine desulfurase; s 99.8 1.3E-17 4.4E-22 153.5 19.0 231 1-271 95-402 (423)
114 1cs1_A CGS, protein (cystathio 99.8 6.9E-17 2.4E-21 147.5 22.7 220 1-264 77-383 (386)
115 3if2_A Aminotransferase; YP_26 99.8 2.4E-17 8.1E-22 153.0 19.9 190 77-270 193-442 (444)
116 3g7q_A Valine-pyruvate aminotr 99.8 1.3E-17 4.3E-22 153.2 17.4 178 89-270 179-415 (417)
117 3ez1_A Aminotransferase MOCR f 99.8 3E-17 1E-21 151.3 19.9 189 77-270 160-417 (423)
118 2oqx_A Tryptophanase; lyase, p 99.8 2.3E-17 7.9E-22 154.0 19.1 250 1-269 99-443 (467)
119 1t3i_A Probable cysteine desul 99.8 7.8E-17 2.7E-21 147.7 21.6 231 1-269 100-414 (420)
120 3t18_A Aminotransferase class 99.8 8.1E-17 2.8E-21 148.0 21.4 181 77-269 163-411 (413)
121 3isl_A Purine catabolism prote 99.8 3.8E-17 1.3E-21 149.7 19.1 231 2-269 73-391 (416)
122 3ppl_A Aspartate aminotransfer 99.8 4.4E-17 1.5E-21 150.6 19.7 187 77-269 169-421 (427)
123 3asa_A LL-diaminopimelate amin 99.8 9.8E-18 3.4E-22 153.7 14.8 177 89-269 162-394 (400)
124 2yrr_A Aminotransferase, class 99.8 3.9E-17 1.3E-21 146.0 18.2 177 77-266 113-351 (353)
125 3ecd_A Serine hydroxymethyltra 99.7 4.8E-17 1.6E-21 149.5 18.8 233 1-268 104-397 (425)
126 1m32_A 2-aminoethylphosphonate 99.7 1.2E-16 4.2E-21 143.4 20.7 231 1-267 66-364 (366)
127 3hdo_A Histidinol-phosphate am 99.7 6.4E-17 2.2E-21 146.0 18.3 165 92-266 151-353 (360)
128 3get_A Histidinol-phosphate am 99.7 7.6E-17 2.6E-21 145.6 18.5 179 77-265 143-364 (365)
129 2e7j_A SEP-tRNA:Cys-tRNA synth 99.7 1.7E-17 5.9E-22 149.7 14.1 231 1-268 79-370 (371)
130 2vi8_A Serine hydroxymethyltra 99.7 1.2E-16 4.1E-21 146.0 19.0 180 77-269 152-388 (405)
131 1svv_A Threonine aldolase; str 99.7 4.8E-17 1.6E-21 145.9 15.8 231 1-268 76-358 (359)
132 2ez2_A Beta-tyrosinase, tyrosi 99.7 3.2E-16 1.1E-20 145.9 21.4 244 1-269 100-432 (456)
133 4f4e_A Aromatic-amino-acid ami 99.7 1.5E-16 5.1E-21 146.8 19.0 231 1-265 127-419 (420)
134 3qhx_A Cystathionine gamma-syn 99.7 2.2E-16 7.7E-21 144.8 19.8 221 1-261 91-391 (392)
135 3d6k_A Putative aminotransfera 99.7 2.4E-16 8.1E-21 145.6 19.9 187 77-269 167-419 (422)
136 2z9v_A Aspartate aminotransfer 99.7 5.5E-16 1.9E-20 141.0 22.0 233 1-269 69-372 (392)
137 1qz9_A Kynureninase; kynurenin 99.7 1.9E-16 6.4E-21 145.3 19.0 226 1-269 98-403 (416)
138 1eg5_A Aminotransferase; PLP-d 99.7 2.2E-16 7.6E-21 142.8 18.2 231 1-270 71-378 (384)
139 2huf_A Alanine glyoxylate amin 99.7 4.3E-16 1.5E-20 141.7 20.0 233 1-270 80-385 (393)
140 3fsl_A Aromatic-amino-acid ami 99.7 4.6E-16 1.6E-20 141.9 19.3 230 1-264 105-396 (397)
141 1v72_A Aldolase; PLP-dependent 99.7 1.2E-16 4E-21 143.4 14.9 178 77-268 123-353 (356)
142 1wyu_B Glycine dehydrogenase s 99.7 4.1E-16 1.4E-20 146.6 19.2 230 1-267 133-440 (474)
143 3gbx_A Serine hydroxymethyltra 99.7 3E-16 1E-20 143.9 17.8 179 77-269 158-397 (420)
144 3ei9_A LL-diaminopimelate amin 99.7 5.9E-16 2E-20 143.1 19.6 171 89-265 197-425 (432)
145 2ch1_A 3-hydroxykynurenine tra 99.7 7.9E-16 2.7E-20 140.1 20.1 233 1-270 79-385 (396)
146 2rfv_A Methionine gamma-lyase; 99.7 5.1E-16 1.7E-20 142.3 18.9 220 2-264 90-396 (398)
147 1b5p_A Protein (aspartate amin 99.7 9.3E-16 3.2E-20 139.8 19.9 183 77-266 154-383 (385)
148 1yaa_A Aspartate aminotransfer 99.7 3.3E-16 1.1E-20 143.9 17.0 232 1-267 108-410 (412)
149 3e9k_A Kynureninase; kynurenin 99.7 2.2E-16 7.5E-21 147.6 15.8 235 2-268 139-461 (465)
150 2qma_A Diaminobutyrate-pyruvat 99.7 2.4E-15 8.2E-20 142.0 22.3 186 77-268 242-496 (497)
151 1iug_A Putative aspartate amin 99.7 8.8E-16 3E-20 137.4 18.4 227 1-268 61-348 (352)
152 3n0l_A Serine hydroxymethyltra 99.7 2.9E-15 9.8E-20 137.3 20.3 233 1-268 97-389 (417)
153 3h7f_A Serine hydroxymethyltra 99.7 5.1E-16 1.7E-20 144.7 15.1 180 77-270 174-416 (447)
154 1gc0_A Methionine gamma-lyase; 99.7 6.2E-15 2.1E-19 135.2 21.9 223 1-264 90-397 (398)
155 3pj0_A LMO0305 protein; struct 99.7 7.3E-16 2.5E-20 138.7 15.4 180 77-264 128-358 (359)
156 3mc6_A Sphingosine-1-phosphate 99.7 3.5E-16 1.2E-20 147.4 12.3 234 1-270 136-439 (497)
157 2oga_A Transaminase; PLP-depen 99.7 4.5E-15 1.6E-19 136.0 18.6 226 1-268 88-396 (399)
158 4eu1_A Mitochondrial aspartate 99.7 3.3E-15 1.1E-19 137.1 17.7 229 2-265 115-408 (409)
159 2bkw_A Alanine-glyoxylate amin 99.7 6.8E-15 2.3E-19 133.2 19.5 175 77-267 126-383 (385)
160 3ndn_A O-succinylhomoserine su 99.7 2.4E-15 8.3E-20 139.1 16.5 173 77-265 156-413 (414)
161 3uwc_A Nucleotide-sugar aminot 99.6 4.3E-15 1.5E-19 134.3 17.1 225 1-267 63-370 (374)
162 1jg8_A L-ALLO-threonine aldola 99.6 9.1E-15 3.1E-19 130.8 18.0 184 77-268 116-346 (347)
163 3acz_A Methionine gamma-lyase; 99.6 9.8E-15 3.4E-19 133.6 18.5 139 2-183 85-231 (389)
164 3p1t_A Putative histidinol-pho 99.6 1.6E-14 5.5E-19 128.6 19.2 162 90-265 135-334 (337)
165 3cai_A Possible aminotransfera 99.6 1.4E-14 4.7E-19 132.4 18.9 223 2-263 97-404 (406)
166 3fkd_A L-threonine-O-3-phospha 99.6 2.3E-14 7.9E-19 128.6 19.7 169 90-267 129-341 (350)
167 3lws_A Aromatic amino acid bet 99.6 1.4E-14 4.8E-19 130.3 18.1 177 77-265 127-356 (357)
168 1uu1_A Histidinol-phosphate am 99.6 1E-14 3.6E-19 130.3 17.1 159 90-264 138-334 (335)
169 2cb1_A O-acetyl homoserine sul 99.6 2.8E-14 9.7E-19 131.5 20.5 169 77-263 130-411 (412)
170 3tcm_A Alanine aminotransferas 99.6 4.1E-14 1.4E-18 133.8 21.8 192 77-271 221-497 (500)
171 1pff_A Methionine gamma-lyase; 99.6 1.2E-14 4E-19 129.6 16.6 217 1-264 23-330 (331)
172 4hvk_A Probable cysteine desul 99.6 1.5E-14 5.1E-19 130.3 17.2 233 1-270 70-375 (382)
173 2jis_A Cysteine sulfinic acid 99.6 1E-13 3.5E-18 131.5 23.1 186 77-267 243-514 (515)
174 3f6t_A Aspartate aminotransfer 99.6 1.5E-14 5.3E-19 137.8 17.2 187 77-270 234-527 (533)
175 1mdo_A ARNB aminotransferase; 99.6 2.4E-14 8.1E-19 130.3 17.8 228 1-269 64-387 (393)
176 2ctz_A O-acetyl-L-homoserine s 99.6 1.1E-14 3.6E-19 134.9 15.4 135 1-174 83-221 (421)
177 3nmy_A Xometc, cystathionine g 99.6 1.1E-14 3.9E-19 134.0 14.6 174 77-266 142-397 (400)
178 3meb_A Aspartate aminotransfer 99.6 9.9E-14 3.4E-18 129.2 21.1 236 1-268 129-444 (448)
179 2okj_A Glutamate decarboxylase 99.6 3.7E-13 1.3E-17 127.2 23.6 187 77-268 229-502 (504)
180 1ibj_A CBL, cystathionine beta 99.6 6E-14 2.1E-18 131.6 17.8 172 77-267 207-461 (464)
181 2po3_A 4-dehydrase; external a 99.6 1.5E-13 5.2E-18 126.8 20.1 226 1-269 77-387 (424)
182 2fnu_A Aminotransferase; prote 99.6 1.1E-13 3.9E-18 124.8 18.2 228 1-268 57-372 (375)
183 3vax_A Putative uncharacterize 99.6 5.9E-15 2E-19 134.5 9.4 228 1-267 90-399 (400)
184 1o69_A Aminotransferase; struc 99.6 5.5E-13 1.9E-17 121.9 22.0 231 1-267 57-386 (394)
185 4eb5_A Probable cysteine desul 99.6 1.8E-13 6.2E-18 123.6 18.4 233 1-270 70-375 (382)
186 3ihj_A Alanine aminotransferas 99.6 6.2E-13 2.1E-17 125.7 22.8 192 77-271 220-496 (498)
187 1qgn_A Protein (cystathionine 99.5 3.3E-13 1.1E-17 125.8 19.9 173 77-267 189-444 (445)
188 3dr4_A Putative perosamine syn 99.5 6.8E-14 2.3E-18 127.5 14.9 223 1-265 81-390 (391)
189 7aat_A Aspartate aminotransfer 99.5 3.3E-13 1.1E-17 123.3 18.7 231 1-265 106-400 (401)
190 3frk_A QDTB; aminotransferase, 99.5 8.9E-14 3E-18 125.9 14.2 224 1-267 61-367 (373)
191 1e5e_A MGL, methionine gamma-l 99.5 9.8E-13 3.3E-17 121.0 21.4 173 77-270 137-397 (404)
192 1n8p_A Cystathionine gamma-lya 99.5 7.7E-13 2.6E-17 121.3 20.0 173 78-264 129-391 (393)
193 2zy4_A L-aspartate beta-decarb 99.5 3.2E-13 1.1E-17 129.1 16.4 188 77-270 235-524 (546)
194 1b9h_A AHBA synthase, protein 99.5 1.2E-12 4.3E-17 118.9 19.7 227 1-267 63-387 (388)
195 3a9z_A Selenocysteine lyase; P 99.5 3.1E-13 1E-17 124.7 15.8 241 1-269 88-429 (432)
196 2aeu_A Hypothetical protein MJ 99.5 3.2E-13 1.1E-17 123.0 15.0 226 1-269 86-372 (374)
197 3nyt_A Aminotransferase WBPE; 99.5 1.9E-13 6.6E-18 123.6 13.4 218 1-263 60-359 (367)
198 3cog_A Cystathionine gamma-lya 99.5 2E-12 7E-17 118.9 20.4 93 77-183 141-239 (403)
199 2x3l_A ORN/Lys/Arg decarboxyla 99.5 1E-13 3.5E-18 129.3 10.4 167 89-268 145-353 (446)
200 2c81_A Glutamine-2-deoxy-scyll 99.5 3E-12 1E-16 117.7 19.7 227 1-268 67-414 (418)
201 4e1o_A HDC, histidine decarbox 99.4 9.1E-12 3.1E-16 117.1 20.0 188 77-269 225-479 (481)
202 3ffr_A Phosphoserine aminotran 99.4 7.7E-12 2.6E-16 111.9 17.5 163 88-265 128-361 (362)
203 3ht4_A Aluminum resistance pro 99.4 1.2E-11 4.2E-16 114.8 19.4 143 77-227 155-344 (431)
204 3k7y_A Aspartate aminotransfer 99.4 1.1E-11 3.7E-16 114.3 16.1 176 77-267 161-404 (405)
205 2z67_A O-phosphoseryl-tRNA(SEC 99.4 3E-11 1E-15 112.8 18.6 182 77-265 216-455 (456)
206 4h51_A Aspartate aminotransfer 99.4 2.1E-11 7.2E-16 112.8 16.6 180 77-270 177-419 (420)
207 3ri6_A O-acetylhomoserine sulf 99.3 1.9E-11 6.6E-16 113.4 16.3 85 77-173 157-242 (430)
208 3k40_A Aromatic-L-amino-acid d 99.3 8E-11 2.7E-15 110.5 19.7 189 77-270 218-473 (475)
209 1rv3_A Serine hydroxymethyltra 99.3 5.4E-11 1.8E-15 111.9 18.5 178 77-267 182-430 (483)
210 3vp6_A Glutamate decarboxylase 99.3 4.4E-10 1.5E-14 106.4 23.7 187 77-268 232-505 (511)
211 3b8x_A WBDK, pyridoxamine 5-ph 99.3 1.4E-10 4.9E-15 105.4 19.2 223 1-261 59-389 (390)
212 2dgk_A GAD-beta, GADB, glutama 99.3 3.3E-10 1.1E-14 105.4 21.1 185 77-270 177-436 (452)
213 1js3_A DDC;, DOPA decarboxylas 99.3 6.5E-10 2.2E-14 104.3 22.3 190 77-271 219-477 (486)
214 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.3 8.2E-11 2.8E-15 108.9 15.6 227 1-266 87-434 (437)
215 3hbx_A GAD 1, glutamate decarb 99.3 6.8E-10 2.3E-14 104.9 21.6 186 77-271 192-447 (502)
216 2fq6_A Cystathionine beta-lyas 99.2 5.4E-11 1.8E-15 109.9 13.2 173 77-263 157-413 (415)
217 1w23_A Phosphoserine aminotran 99.2 4.4E-10 1.5E-14 100.6 15.5 160 89-267 140-359 (360)
218 2fyf_A PSAT, phosphoserine ami 99.2 3.7E-10 1.3E-14 103.0 14.3 163 89-267 164-397 (398)
219 2a7v_A Serine hydroxymethyltra 99.1 2.3E-09 8E-14 100.9 18.8 178 77-268 192-441 (490)
220 3jzl_A Putative cystathionine 99.1 8.2E-09 2.8E-13 95.1 18.5 93 77-182 149-251 (409)
221 1wyu_A Glycine dehydrogenase ( 99.0 1.5E-08 5.2E-13 93.6 16.6 164 89-265 195-437 (438)
222 3ju7_A Putative PLP-dependent 99.0 2.3E-08 8E-13 90.9 17.1 176 77-267 116-374 (377)
223 1c4k_A Protein (ornithine deca 99.0 1.5E-08 5.2E-13 99.6 16.4 52 216-269 516-567 (730)
224 3hvy_A Cystathionine beta-lyas 98.9 1.1E-07 3.6E-12 88.1 19.4 169 77-264 164-355 (427)
225 3i16_A Aluminum resistance pro 98.9 2E-07 6.7E-12 86.3 20.3 95 77-182 164-268 (427)
226 3hl2_A O-phosphoseryl-tRNA(SEC 98.9 5.9E-08 2E-12 89.7 16.4 188 77-271 202-464 (501)
227 3bc8_A O-phosphoseryl-tRNA(SEC 98.8 2.4E-07 8.2E-12 85.9 18.6 190 77-271 184-446 (450)
228 2c0r_A PSAT, phosphoserine ami 98.8 6.3E-08 2.1E-12 86.8 14.4 158 89-267 141-360 (362)
229 2vyc_A Biodegradative arginine 98.7 1.7E-07 6E-12 92.6 16.1 50 218-269 557-606 (755)
230 3bwn_A AT1G70560, L-tryptophan 98.7 7.7E-08 2.6E-12 87.7 11.3 159 90-267 157-386 (391)
231 3n75_A LDC, lysine decarboxyla 98.4 1.4E-05 4.7E-10 78.3 17.3 180 77-268 282-560 (715)
232 3e77_A Phosphoserine aminotran 98.3 4.1E-06 1.4E-10 76.2 12.4 163 89-267 151-374 (377)
233 3m5u_A Phosphoserine aminotran 98.2 3.6E-05 1.2E-09 69.5 16.2 159 89-267 139-359 (361)
234 3qm2_A Phosphoserine aminotran 98.2 1.5E-05 5.1E-10 72.6 13.2 161 89-267 165-384 (386)
235 2hox_A ALLIIN lyase 1; cystein 98.2 1.8E-05 6.2E-10 72.8 12.8 155 90-266 196-423 (427)
236 3ou5_A Serine hydroxymethyltra 97.8 0.0015 5.2E-08 60.2 17.3 177 77-266 192-439 (490)
237 3bh0_A DNAB-like replicative h 51.6 29 0.001 29.7 6.3 40 90-129 179-226 (315)
238 4a1f_A DNAB helicase, replicat 50.4 22 0.00074 31.2 5.3 41 90-130 156-202 (338)
239 1k7c_A Rhamnogalacturonan acet 49.1 37 0.0013 27.4 6.3 52 77-128 111-167 (233)
240 3mio_A DHBP synthase, 3,4-dihy 47.9 35 0.0012 27.6 5.7 38 88-129 156-194 (206)
241 1g57_A DHBP synthase, 3,4-dihy 43.7 27 0.00093 28.5 4.5 36 89-129 166-201 (217)
242 2fqm_A Phosphoprotein, P prote 42.3 43 0.0015 21.9 4.3 31 238-268 17-47 (75)
243 3p8k_A Hydrolase, carbon-nitro 42.3 60 0.002 27.1 6.7 53 77-129 39-100 (281)
244 4gqr_A Pancreatic alpha-amylas 41.7 43 0.0015 30.1 6.1 47 88-134 34-100 (496)
245 1tks_A 3,4-dihydroxy-2-butanon 41.3 52 0.0018 26.5 5.7 38 88-129 157-194 (204)
246 3o63_A Probable thiamine-phosp 39.9 21 0.00073 29.6 3.4 51 77-131 46-103 (243)
247 1q57_A DNA primase/helicase; d 38.9 66 0.0023 29.4 7.0 40 90-129 354-399 (503)
248 3nl6_A Thiamine biosynthetic b 36.7 52 0.0018 30.7 5.8 48 77-131 28-76 (540)
249 3bww_A Protein of unknown func 36.2 21 0.00073 30.8 2.8 39 94-132 57-96 (307)
250 3bgw_A DNAB-like replicative h 36.0 80 0.0027 28.5 6.9 40 90-129 308-355 (444)
251 1snn_A DHBP synthase, 3,4-dihy 35.2 61 0.0021 26.6 5.3 37 88-129 176-212 (227)
252 3vup_A Beta-1,4-mannanase; TIM 33.5 30 0.001 28.9 3.4 22 112-133 91-112 (351)
253 3edf_A FSPCMD, cyclomaltodextr 33.1 1.2E+02 0.0042 28.3 8.0 52 89-140 160-228 (601)
254 3pzt_A Endoglucanase; alpha/be 32.5 31 0.0011 29.7 3.4 51 78-131 72-125 (327)
255 1vhx_A Putative holliday junct 31.8 66 0.0023 24.4 4.8 56 77-134 44-101 (150)
256 2zod_A Selenide, water dikinas 31.7 51 0.0017 28.6 4.7 55 110-165 120-184 (345)
257 3bzy_B ESCU; auto cleavage pro 31.6 28 0.00097 23.7 2.4 23 112-134 28-50 (83)
258 2o8n_A APOA-I binding protein; 31.5 68 0.0023 26.9 5.2 60 93-159 152-213 (265)
259 7a3h_A Endoglucanase; hydrolas 30.9 35 0.0012 28.9 3.4 23 110-132 79-101 (303)
260 1lwj_A 4-alpha-glucanotransfer 30.8 38 0.0013 30.4 3.8 51 89-139 35-98 (441)
261 1v5w_A DMC1, meiotic recombina 30.4 93 0.0032 26.8 6.2 53 77-129 206-269 (343)
262 1k4i_A 3,4-dihydroxy-2-butanon 29.8 91 0.0031 25.7 5.5 38 88-129 165-212 (233)
263 4dzi_A Putative TIM-barrel met 29.7 66 0.0023 28.9 5.2 51 77-130 178-230 (423)
264 3rjt_A Lipolytic protein G-D-S 29.4 78 0.0027 24.2 5.1 54 75-128 114-172 (216)
265 3ivz_A Nitrilase; alpha-beta s 29.0 67 0.0023 26.4 4.8 37 94-130 37-86 (262)
266 3p94_A GDSL-like lipase; serin 28.7 1.5E+02 0.0052 22.3 6.8 19 110-128 141-159 (204)
267 3v7e_A Ribosome-associated pro 28.7 46 0.0016 22.4 3.0 26 109-134 38-63 (82)
268 1tvn_A Cellulase, endoglucanas 28.5 41 0.0014 28.2 3.4 21 111-131 79-99 (293)
269 2e11_A Hydrolase; dimethylarse 28.2 1.1E+02 0.0036 25.1 5.9 52 77-129 22-81 (266)
270 1bqc_A Protein (beta-mannanase 28.0 46 0.0016 28.0 3.6 24 109-133 63-86 (302)
271 2dvt_A Thermophilic reversible 27.9 1.2E+02 0.004 25.4 6.3 52 77-130 110-164 (327)
272 1qwg_A PSL synthase;, (2R)-pho 27.6 37 0.0013 28.4 2.8 49 77-130 25-74 (251)
273 1qnr_A Endo-1,4-B-D-mannanase; 27.3 43 0.0015 28.5 3.4 22 110-131 89-110 (344)
274 4hty_A Cellulase; (alpha/beta) 26.8 44 0.0015 29.1 3.4 22 110-131 120-141 (359)
275 3t7y_A YOP proteins translocat 26.8 38 0.0013 23.9 2.4 24 111-134 42-65 (97)
276 3lwf_A LIN1550 protein, putati 26.7 85 0.0029 24.0 4.7 9 216-224 94-102 (159)
277 2q6t_A DNAB replication FORK h 26.7 1.2E+02 0.0042 27.1 6.4 40 90-129 310-358 (444)
278 1egz_A Endoglucanase Z, EGZ, C 26.6 46 0.0016 27.8 3.4 21 111-131 77-97 (291)
279 3zs7_A Pyridoxal kinase; trans 26.4 26 0.0009 29.9 1.8 9 125-133 112-120 (300)
280 4ggi_A UDP-2,3-diacylglucosami 26.3 1E+02 0.0036 25.9 5.6 41 78-128 235-275 (283)
281 2vt1_B Surface presentation of 26.0 40 0.0014 23.6 2.4 24 111-134 27-50 (93)
282 4aie_A Glucan 1,6-alpha-glucos 25.8 51 0.0017 30.2 3.8 46 90-135 45-104 (549)
283 4hf7_A Putative acylhydrolase; 25.7 1.7E+02 0.0058 22.6 6.5 52 77-128 104-164 (209)
284 1wza_A Alpha-amylase A; hydrol 25.6 56 0.0019 29.7 4.0 50 89-138 47-109 (488)
285 3mag_A VP39; methylated adenin 25.2 1.2E+02 0.0042 25.9 5.6 54 77-130 75-138 (307)
286 2whl_A Beta-mannanase, baman5; 25.2 51 0.0017 27.6 3.4 22 109-130 62-83 (294)
287 3c01_E Surface presentation of 25.1 42 0.0014 23.7 2.4 24 111-134 27-50 (98)
288 2qen_A Walker-type ATPase; unk 25.0 48 0.0017 27.9 3.3 25 110-134 114-139 (350)
289 1xp8_A RECA protein, recombina 24.7 1.2E+02 0.0041 26.6 5.9 50 78-129 142-206 (366)
290 3t8r_A Staphylococcus aureus C 24.5 98 0.0033 23.0 4.6 14 218-231 46-59 (143)
291 2cks_A Endoglucanase E-5; carb 24.5 49 0.0017 27.9 3.2 21 111-131 80-100 (306)
292 2f6k_A Metal-dependent hydrola 24.3 1.4E+02 0.0049 24.6 6.1 49 76-129 105-153 (307)
293 2yyd_A Selenide, water dikinas 24.1 73 0.0025 27.7 4.3 55 110-165 120-184 (345)
294 2z1k_A (NEO)pullulanase; hydro 23.6 64 0.0022 29.1 4.0 49 90-138 63-124 (475)
295 2c0h_A Mannan endo-1,4-beta-ma 23.6 55 0.0019 27.9 3.4 20 111-130 91-110 (353)
296 2dr3_A UPF0273 protein PH0284; 23.5 1.6E+02 0.0055 23.1 6.1 51 77-129 117-168 (247)
297 2dh2_A 4F2 cell-surface antige 23.4 84 0.0029 28.1 4.7 49 89-137 48-108 (424)
298 2r6a_A DNAB helicase, replicat 23.4 82 0.0028 28.3 4.6 41 90-130 313-360 (454)
299 3n9k_A Glucan 1,3-beta-glucosi 23.1 56 0.0019 29.1 3.4 23 109-131 111-133 (399)
300 1g01_A Endoglucanase; alpha/be 23.1 57 0.0019 28.4 3.4 23 111-133 90-112 (364)
301 1ivn_A Thioesterase I; hydrola 22.9 79 0.0027 24.0 3.9 19 110-128 119-137 (190)
302 2prs_A High-affinity zinc upta 22.7 82 0.0028 26.4 4.2 30 105-134 204-233 (284)
303 2r2a_A Uncharacterized protein 22.7 24 0.00082 28.2 0.8 17 120-136 84-100 (199)
304 1h1n_A Endo type cellulase ENG 22.7 60 0.0021 27.4 3.4 22 111-132 72-93 (305)
305 1agx_A Glutaminase-asparaginas 22.7 1.2E+02 0.0043 26.1 5.5 44 79-129 231-274 (331)
306 2i1q_A DNA repair and recombin 22.6 1.1E+02 0.0036 26.0 5.0 52 77-129 192-254 (322)
307 3ghf_A Septum site-determining 22.5 1.5E+02 0.005 21.5 5.1 46 77-128 31-78 (120)
308 3lda_A DNA repair protein RAD5 22.2 2.6E+02 0.0087 24.8 7.6 43 90-132 273-327 (400)
309 1uta_A FTSN, MSGA, cell divisi 22.2 1.4E+02 0.0049 19.4 4.7 50 213-263 19-68 (81)
310 2wm1_A 2-amino-3-carboxymucona 22.1 1.8E+02 0.006 24.6 6.4 48 77-129 126-173 (336)
311 3jug_A Beta-mannanase; TIM-bar 22.0 58 0.002 28.4 3.2 24 109-132 85-108 (345)
312 2wc7_A Alpha amylase, catalyti 22.0 57 0.0019 29.7 3.3 49 90-138 69-130 (488)
313 1h4p_A Glucan 1,3-beta-glucosi 21.8 62 0.0021 28.8 3.4 24 109-132 112-135 (408)
314 3dc7_A Putative uncharacterize 21.5 1.8E+02 0.006 22.7 5.9 19 110-128 160-178 (232)
315 4aio_A Limit dextrinase; hydro 21.5 70 0.0024 31.3 4.0 50 91-140 359-408 (884)
316 1rh9_A Endo-beta-mannanase; en 21.5 64 0.0022 27.9 3.4 20 111-130 85-104 (373)
317 3hp4_A GDSL-esterase; psychrot 21.4 1.5E+02 0.005 22.1 5.2 19 110-128 123-141 (185)
318 1p1j_A Inositol-3-phosphate sy 21.3 45 0.0015 30.9 2.3 57 77-135 261-324 (533)
319 1f89_A 32.5 kDa protein YLR351 21.3 1.5E+02 0.005 24.6 5.5 38 92-129 46-96 (291)
320 3gi1_A LBP, laminin-binding pr 21.2 98 0.0034 26.0 4.4 30 105-134 209-238 (286)
321 1ece_A Endocellulase E1; glyco 21.1 66 0.0023 27.6 3.4 24 110-133 94-117 (358)
322 2lbw_A H/ACA ribonucleoprotein 21.1 70 0.0024 23.2 3.0 25 108-132 47-71 (121)
323 2o14_A Hypothetical protein YX 21.0 2.3E+02 0.0078 24.7 7.0 54 75-128 253-313 (375)
324 1toa_A Tromp-1, protein (perip 20.6 95 0.0033 26.6 4.2 35 100-134 222-256 (313)
325 3mcq_A Thiamine-monophosphate 20.4 1.3E+02 0.0043 25.7 5.0 54 110-164 98-160 (319)
326 1ceo_A Cellulase CELC; glycosy 20.3 71 0.0024 27.2 3.4 23 111-133 69-91 (343)
327 1jzt_A Hypothetical 27.5 kDa p 20.2 2.2E+02 0.0074 23.4 6.3 63 92-159 133-199 (246)
328 1uuq_A Mannosyl-oligosaccharid 20.2 69 0.0024 28.7 3.4 20 111-130 111-130 (440)
329 3qr3_A Endoglucanase EG-II; TI 20.2 72 0.0025 27.7 3.4 56 77-134 45-107 (340)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=2.9e-59 Score=438.28 Aligned_cols=264 Identities=27% Similarity=0.423 Sum_probs=222.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc--cc-CCCCCceEEccCCCCcCCCCCCCc-hHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM--LS-SEKKPWVHVIPFPDTYRGEFSADD-PQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 76 (284)
|||||+|||+||+||+|++||+|++||||+|++++++++.... .. ..+...+.++|.|+.++....+.. .+.....
T Consensus 135 sEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 214 (456)
T 4atq_A 135 AEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRA 214 (456)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHH
Confidence 6999999999999999999999999999999999987754321 11 333445666788877665544322 2233333
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+ .++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||||+ +|+++++|+.|||+
T Consensus 215 ~~~~e~~~--~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~-~~a~e~~gv~PDiv 291 (456)
T 4atq_A 215 ITMIEKQI--GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE-WFAVDHEGVVPDII 291 (456)
T ss_dssp HHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTCCCSEE
T ss_pred HHHHHHhh--cCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc-cccccccCCCCchh
Confidence 33333322 2446999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred EecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|+||+++||+|+|++++++++++.+.. ++++++++++++++|+++
T Consensus 292 t~gK~lggg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 371 (456)
T 4atq_A 292 TMAKGIAGGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSA 371 (456)
T ss_dssp EECGGGGTTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hhhhcccCcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998754 458889999999998875
Q ss_pred -----------cCceeEEEEe------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 -----------LHIFWCLILL------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 -----------~G~~~~i~~~------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|+|++++++ ++.+.+.++++.|+++|+++.++++.+++|||.|||++|++|||+++++|+++
T Consensus 372 ~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~a 451 (456)
T 4atq_A 372 GGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAA 451 (456)
T ss_dssp ----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 6899999996 23456788999999999999998888899999999999999999999999999
Q ss_pred HHH
Q psy11784 265 FTS 267 (284)
Q Consensus 265 l~~ 267 (284)
++.
T Consensus 452 l~a 454 (456)
T 4atq_A 452 IKA 454 (456)
T ss_dssp HHH
T ss_pred HHh
Confidence 975
No 2
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=1.3e-57 Score=428.55 Aligned_cols=266 Identities=21% Similarity=0.356 Sum_probs=227.4
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCccccc-CCCCCceEEccCCCCcCCCCC-CCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS-SEKKPWVHVIPFPDTYRGEFS-ADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 72 (284)
|||||+|||+||+| ++|++||+|+++|||+|.+++++++..++.. ........++|.|+.+++... ..+++.
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 69999999999987 5788999999999999999999887654432 222334445788887765443 334455
Q ss_pred HHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+.+++++.+.+.. +++||||+|||||++|+++||++||++|+++|++||++||+|||||||||||+ +|+++++|+
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~gv 296 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGN-TWGCVTYDF 296 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSS-SCHHHHTTC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccc-hhHHHhcCC
Confidence 6677888888887544 45999999999999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhchh------------------------------------hhhHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLNC------------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~------------------------------------l~~~~~~~~~l 194 (284)
.|||+|++|+++|| +|+|++++++++++.+.. ++++++++++|
T Consensus 297 ~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l 376 (473)
T 4e3q_A 297 TPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRF 376 (473)
T ss_dssp CCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred CCChHHhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHH
Confidence 99999999999999 799999999999987632 45899999999
Q ss_pred HHHHHhc-----------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
+++|+++ .|+|++++++.+ ......+.+.|+++||++.+. ++++||.||+++|++|
T Consensus 377 ~~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g~~i~l~PPL~it~~e 453 (473)
T 4e3q_A 377 EERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL---GQSVVLCPPFILTEAQ 453 (473)
T ss_dssp HHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE---TTEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec---CCEEEEeCCCCCCHHH
Confidence 9999987 799999998621 234678999999999999864 5899999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy11784 254 VLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 254 id~~~~~l~~~l~~~~~ 270 (284)
+|+++++|+++++++..
T Consensus 454 id~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 454 MDEMFDKLEKALDKVFA 470 (473)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998754
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=2.7e-51 Score=383.20 Aligned_cols=237 Identities=22% Similarity=0.289 Sum_probs=202.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|||||+|||+||+||||++||+|+++|||+|.++++.+... ..+......| +++ ++.+
T Consensus 153 sEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~-----~~~~~~~~~p--------~nd---------~~~l 210 (454)
T 4ao9_A 153 TEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPT-----TVPFDFLVLP--------YND---------AQTA 210 (454)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTT-----SCCSEEEEEC--------TTC---------HHHH
T ss_pred HHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCc-----cCCCCcccCC--------Cch---------HHHH
Confidence 69999999999999999999999999999998877654321 1111122222 343 7889
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecc
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK 160 (284)
++.++++++++||||+|||||++|+++|+++||++|+++|++||++||+||||| ||+|. +|+++++|+.||++|+||
T Consensus 211 ~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~-~~a~e~~gv~PDi~t~gK 287 (454)
T 4ao9_A 211 RAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAP-HGLANKLGIRSDLTTLGK 287 (454)
T ss_dssp HHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGST-TCHHHHHTCCCSEEEEEG
T ss_pred HHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCcc-ccchhccCCCCcEEEecc
Confidence 999988778899999999999999999999999999999999999999999999 49998 889999999999999999
Q ss_pred cccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 161 PMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 161 ~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
++|||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 288 ~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~ 367 (454)
T 4ao9_A 288 YIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGV 367 (454)
T ss_dssp GGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred ccCCCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998743 458899999999999886
Q ss_pred ------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+|+++++.. +......++..|+++||++.|.+ ++.+++.+|++|||+++++|++
T Consensus 368 ~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~ 441 (454)
T 4ao9_A 368 AMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGS 441 (454)
T ss_dssp SCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHH
T ss_pred CEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHH
Confidence 79999999861 12345678889999999998632 3567888999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 442 ~l~~~ 446 (454)
T 4ao9_A 442 FIGGH 446 (454)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 99874
No 4
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=2e-46 Score=353.89 Aligned_cols=266 Identities=22% Similarity=0.389 Sum_probs=226.8
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
||||+.|+|+||++ ++|.+||+++++|||.+.+++++++..... . ......+.+++.|..++. ++++.++.
T Consensus 124 seA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~ 202 (476)
T 3i5t_A 124 STAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAF 202 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHH
Confidence 58999999999999 899999999999999999988887643221 1 223344566788888877 66666666
Q ss_pred HHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc-ccC
Q psy11784 73 AQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ-TQG 150 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~-~~g 150 (284)
...++++|++++++.. +++++||+||+++++|+++++++||++|+++|++||++||+||||+||||+|+ +|+++ +++
T Consensus 203 ~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~-~~~~~~~~~ 281 (476)
T 3i5t_A 203 LDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE-WFASEKVFG 281 (476)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC-ceeeecccC
Confidence 7777899999997544 46999999999999999999999999999999999999999999999999998 78888 999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch---------h---------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN---------C---------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~---------~---------------------------l~~~~~~~~~ 193 (284)
+.||++|+||++++| +|+|++++++++++.+. . ++++++++++
T Consensus 282 v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~ 361 (476)
T 3i5t_A 282 VVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADY 361 (476)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999 89999999999998763 1 3478888999
Q ss_pred HHHHHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
+++.|+++ .|+|+++++..+. .....+++.|+++||++.+.+ +++||+||+++|++
T Consensus 362 l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRi~p~l~~t~e 438 (476)
T 3i5t_A 362 FAAALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG---DLCVISPPLIISRA 438 (476)
T ss_dssp HHHHHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET---TEEEECCCTTCCHH
T ss_pred HHHHHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC---CEEEEECCCCCCHH
Confidence 99999875 5888899886321 136788999999999999753 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy11784 253 NVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~~~ 271 (284)
++++++++|+++++++.++
T Consensus 439 ~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 439 QIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
No 5
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=100.00 E-value=3.4e-47 Score=378.89 Aligned_cols=264 Identities=19% Similarity=0.295 Sum_probs=203.2
Q ss_pred CcHHHHHHHHH-HHcc--------------CCccEEEEcCCCcccchhhhcCCCCccccc---CCC----------C---
Q psy11784 1 SEANDLALQLA-RAYT--------------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS---SEK----------K--- 49 (284)
Q Consensus 1 seA~e~AlklA-r~~~--------------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~---~~~----------~--- 49 (284)
|||||+|||+| |+|+ +|.+||+|+++|||+|.+++++++...... ... +
T Consensus 452 SeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~ 531 (831)
T 4a0g_A 452 STAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVF 531 (831)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEE
T ss_pred hHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCcccc
Confidence 69999999999 6674 478999999999999999999886421110 000 0
Q ss_pred --CceEEccCCCCcCCCC------CC---------CchHHHHHHHHHHHHHHHh-----cCCCeeEEEEcce-ecCCCcc
Q psy11784 50 --PWVHVIPFPDTYRGEF------SA---------DDPQAAQKYAQAARNIMEA-----HRDNIATLICEPV-FVVHGAV 106 (284)
Q Consensus 50 --~~~~~~~~~~~~~~~~------~~---------~~~~~~~~~~~~l~~~i~~-----~~~~vaavi~Epv-~~~~G~~ 106 (284)
+.+.++|.|+.++... ++ +..+....|+++|++.|+. ..+++||||+||| ||+||++
T Consensus 532 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~ 611 (831)
T 4a0g_A 532 LSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMH 611 (831)
T ss_dssp EETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSE
T ss_pred ccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCc
Confidence 1223455666555432 11 0112345677888888863 2455999999997 9999999
Q ss_pred cCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecccccCC-cceeEEEecHHHHHhchh--
Q psy11784 107 VPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-- 183 (284)
Q Consensus 107 ~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-- 183 (284)
++|++||++|+++|++||++||+|||||||||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.+..
T Consensus 612 ~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~ 690 (831)
T 4a0g_A 612 MVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV-ETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDS 690 (831)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB-SSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC-chhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhccc
Confidence 99999999999999999999999999999999998 78999999999999999999999 699999999999987732
Q ss_pred ------------------------h---------hhHHHHHHH--------HHHHHHhc--------cCceeEEEEecc-
Q psy11784 184 ------------------------L---------DDNRPSGKY--------LVRPLGIN--------LHIFWCLILLSI- 213 (284)
Q Consensus 184 ------------------------l---------~~~~~~~~~--------l~~~L~~~--------~G~~~~i~~~~~- 213 (284)
+ +++.+++++ +.+.+.+. .|+|+++++..+
T Consensus 691 ~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~ 770 (831)
T 4a0g_A 691 KLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADA 770 (831)
T ss_dssp GGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---
T ss_pred ccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCc
Confidence 1 122222222 23333332 799999999632
Q ss_pred ------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 214 ------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 214 ------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
...+..+++.|+++||++.|. +++|||.||+++|++|||+++++|+++++++
T Consensus 771 ~~~~~~~~~a~~~~~~l~e~Gv~v~p~---g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 771 SNSGYASLYAKSLLIMLREDGIFTRPL---GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp ------CHHHHHHHHHHHHTTEECCCB---TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cccccchHHHHHHHHHHHHCCcEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 235678999999999999864 5899999999999999999999999988654
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=3.8e-46 Score=351.67 Aligned_cols=264 Identities=24% Similarity=0.374 Sum_probs=220.6
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcC-CCCCCCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYR-GEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ 71 (284)
|||||+|+|+||.| ++|.+||+|+++|||.+.+++++++... +.. . ....+.++|.|..++ .++ .+.++
T Consensus 126 seA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~-~~~~~ 203 (472)
T 3hmu_A 126 SEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNWWAEGGD-MDPEE 203 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCccccCCcc-cCHHH
Confidence 58999999999998 4789999999999999999888775432 111 2 334455677776555 222 34455
Q ss_pred HHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++|++++++.. +++++||+||+++++|+++++++||++|+++|++||++||+||||+||||+|+ +|++++++
T Consensus 204 ~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~a~~~~~ 282 (472)
T 3hmu_A 204 FGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN-WFGTQTMG 282 (472)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc-cchhHHhC
Confidence 56667889999987544 45999999999999999999999999999999999999999999999999997 78999999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-------------------------------hhhHH-HHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-------------------------------LDDNR-PSGKYLVRP 197 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-------------------------------l~~~~-~~~~~l~~~ 197 (284)
+.||++||||+++|| +|+|++++++++++.+.. +++++ ++++++++.
T Consensus 283 v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~ 362 (472)
T 3hmu_A 283 IRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEK 362 (472)
T ss_dssp CCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHH
T ss_pred CCCceeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999988 799999999999987721 34677 888999999
Q ss_pred HHhc-----------cCceeEEEEecc-----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 198 LGIN-----------LHIFWCLILLSI-----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 198 L~~~-----------~G~~~~i~~~~~-----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
|+++ .|+|+++++..+ ...+..+++.|+++||++.+++ +++||+||+++|+++++
T Consensus 363 L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRi~p~~~~t~e~i~ 439 (472)
T 3hmu_A 363 WEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG---DRMIISPPLVITPAEID 439 (472)
T ss_dssp HHGGGGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET---TEEEECCCTTCCHHHHH
T ss_pred HHHHhcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC---CEEEEECCCCCCHHHHH
Confidence 9775 588899998632 2236789999999999999864 89999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy11784 256 FIVSTLNRIFTSLQM 270 (284)
Q Consensus 256 ~~~~~l~~~l~~~~~ 270 (284)
+++++|+++++++..
T Consensus 440 ~~l~~l~~~l~~~~~ 454 (472)
T 3hmu_A 440 EMFVRIRKSLDEAQA 454 (472)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 7
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=3.2e-45 Score=343.55 Aligned_cols=266 Identities=25% Similarity=0.415 Sum_probs=222.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
||||++|+|+||.++||.+||+|+++|||++.+++++++.. +... ......+.++|.|..++.+++.+.++....++
T Consensus 135 seA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (453)
T 4ffc_A 135 AEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAI 214 (453)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHH
Confidence 58999999999999999999999999999999988876432 2211 22334456678887777665554444444445
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+.|++.+. ++.+++||+||+++++|+++++++||++|+++|++||++||+||||+||||+|. +++++++++.||++|
T Consensus 215 ~~l~~~i~--~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~a~~~~~~~pdi~t 291 (453)
T 4ffc_A 215 SRIETQIG--AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-WFASEHEGIVPDIVT 291 (453)
T ss_dssp HHHHHHTC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSEEE
T ss_pred HHHHHhcC--CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-cchhhhcCCCcchHh
Confidence 66665542 345999999999999999999999999999999999999999999999999998 788999999999999
Q ss_pred ecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 158 VGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 158 ~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
|||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 292 ~sK~~~~G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 371 (453)
T 4ffc_A 292 MAKGIAGGMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDII 371 (453)
T ss_dssp ECGGGGTTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred hhhhhcCCcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99999999999999999999987753 346778888888888764
Q ss_pred -----cCceeEEEEe------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -----LHIFWCLILL------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -----~G~~~~i~~~------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|+|+++++. ++......+++.|+++||++.+++.+++++||+||+++|++++++++++|+++++++.
T Consensus 372 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 372 GEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp EEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5889999885 2334678899999999999999887789999999999999999999999999998764
No 8
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=8.2e-45 Score=340.53 Aligned_cols=265 Identities=26% Similarity=0.411 Sum_probs=217.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCC-CCCchHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEF-SADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 76 (284)
||||++|+|+||.++||.+||+++++|||++.+++++++.. +... ......+.++|.|+.++.++ +.+.+.....+
T Consensus 132 seA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 211 (451)
T 3oks_A 132 SEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELA 211 (451)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHH
Confidence 58999999999999999999999999999999988876532 2211 22333455677775554322 11211222334
Q ss_pred HHHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
++.+++.+++ .++++++||+||+++++|+++++++||++|+++|++||++||+||||+||||+|+ +++++++++.||
T Consensus 212 ~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~pd 290 (451)
T 3oks_A 212 AKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA-MFACEHEGIDPD 290 (451)
T ss_dssp HHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTCCCS
T ss_pred HHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc-chhhhhcCCCCC
Confidence 5566666653 2345999999999999999999999999999999999999999999999999998 789999999999
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
++||||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 291 i~t~sK~l~~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 370 (451)
T 3oks_A 291 LIVTAKGIAGGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAED 370 (451)
T ss_dssp EEEECGGGGTTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeehhhhhCCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999987753 346778888888888764
Q ss_pred --------cCceeEEEEe------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILL------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --------~G~~~~i~~~------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++. ++......+++.|+++||++.+++.+++++||+||+++|++++++++++|+++++
T Consensus 371 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 371 DRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp TTEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 5889999885 2344677899999999999999887789999999999999999999999999875
No 9
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=3e-43 Score=330.44 Aligned_cols=267 Identities=22% Similarity=0.345 Sum_probs=220.0
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCC-CCCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEF-SADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 71 (284)
||||++|+|++|.| ++|.+||+++++|||.+.+++++++..... . ......+.++|.|..+++.. +.+.++
T Consensus 122 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 201 (460)
T 3gju_A 122 SDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQ 201 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhH
Confidence 58999999999998 689999999999999999988876543221 1 22233455678777666542 233445
Q ss_pred HHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++|++++++.. +.+++||+||+++++|.++++++||++|+++|++||++||+||||+||||+|+ ++++++++
T Consensus 202 ~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~ 280 (460)
T 3gju_A 202 FSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT-MFGSDHYG 280 (460)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcC
Confidence 55666889999887443 45999999999999999999999999999999999999999999999999997 78889999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch------h------------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN------C------------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~------~------------------------------l~~~~~~~~~ 193 (284)
+.||++||||++++| +|+|++++++++++.+. . ++++++++++
T Consensus 281 ~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 360 (460)
T 3gju_A 281 IKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAY 360 (460)
T ss_dssp CCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999 79999999999988773 1 3467778888
Q ss_pred HHHHHHhc------------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCH
Q psy11784 194 LVRPLGIN------------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTT 251 (284)
Q Consensus 194 l~~~L~~~------------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 251 (284)
+++.|.+. .|+++++++..+ ...+..+++.|+++||++.+++ .++++||+||+++|+
T Consensus 361 ~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~iRi~~~~~~t~ 439 (460)
T 3gju_A 361 FRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP-QGDILGFAPPLCLTR 439 (460)
T ss_dssp HHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS-SSCEEEECCCTTCCH
T ss_pred HHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC-CCCEEEEECCCCCCH
Confidence 88888543 588888888622 1236789999999999999865 458999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy11784 252 ENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~~ 269 (284)
+++++++++|+++++++.
T Consensus 440 e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 440 EQADIVVSKTADAVKSVF 457 (460)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 10
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=7.9e-43 Score=326.56 Aligned_cols=265 Identities=23% Similarity=0.404 Sum_probs=221.9
Q ss_pred CcHHHHHHHHHHHc---c---CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY---T---GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~---~---~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||++.|+|++++| + ++.+||+++++|||.+.+++++++...... ........++|.|+.++++++++.++.
T Consensus 117 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (452)
T 3n5m_A 117 SEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIY 196 (452)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGG
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhH
Confidence 58999999999988 6 889999999999999998888775432211 122234556788999999988765555
Q ss_pred HHHHHHHHHHHHH-hcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 73 AQKYAQAARNIME-AHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 73 ~~~~~~~l~~~i~-~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
...++++|++.++ .+++++++||+||+ ++ +|.++++++||++|+++|++||++||+||||+||||+|+ ++++++++
T Consensus 197 ~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~~~~~~~ 274 (452)
T 3n5m_A 197 DVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK-AFGFMNYD 274 (452)
T ss_dssp GCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc-cchhhhcC
Confidence 5666889999887 44456999999999 89 999999999999999999999999999999999999998 78899999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch-----h------------------------------hhhHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN-----C------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~-----~------------------------------l~~~~~~~~~l 194 (284)
+.||++|+||++++| +|+|++++++++++.+. . +++++++++++
T Consensus 275 ~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l 354 (452)
T 3n5m_A 275 VKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLL 354 (452)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCEEeecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999 89999999999998872 1 34677888888
Q ss_pred HHHHHhc------------cCceeEEEEecc--------cHHHHHHHHHHHHCCcEEeecCC----CCCEEEEEcCCCCC
Q psy11784 195 VRPLGIN------------LHIFWCLILLSI--------TYYLYRYTRRMKEAKIIVANEGE----YGNVLLFLPAMCLT 250 (284)
Q Consensus 195 ~~~L~~~------------~G~~~~i~~~~~--------~~~~~~~~~~l~~~Gv~~~~~~~----~~~~lr~~p~l~~t 250 (284)
++.|+++ .|+++++++..+ ......+++.|+++||++.+++. .++++||.||+++|
T Consensus 355 ~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t 434 (452)
T 3n5m_A 355 LEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVIS 434 (452)
T ss_dssp HHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCC
T ss_pred HHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCC
Confidence 8888764 578888888521 12356789999999999998753 25899999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIFTS 267 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~ 267 (284)
++++++++++|++++++
T Consensus 435 ~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 435 SEEIAFVIGTLKTAMER 451 (452)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988753
No 11
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=8.3e-43 Score=327.40 Aligned_cols=265 Identities=21% Similarity=0.336 Sum_probs=217.9
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcC-CCCCCCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYR-GEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ 71 (284)
|||++.|+|+++.+ +++.+||+++++|||.+.+++++++..... . ........++|.|..++ ..+ .+.+.
T Consensus 121 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~ 199 (459)
T 4a6r_A 121 SESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDE 199 (459)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHH
Confidence 58999999999998 478999999999999999888776543211 1 22223455677776555 222 34455
Q ss_pred HHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++|++.++... +.+++||+||+++++|.++++++||++|+++|++||++||+||||+||||+|+ ++++++++
T Consensus 200 ~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~-~~~~~~~~ 278 (459)
T 4a6r_A 200 FGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE-WFGHQHFG 278 (459)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcC
Confidence 55666889999987543 45999999999999999999999999999999999999999999999999997 78889999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch---h-----------------------------hhhHH-HHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN---C-----------------------------LDDNR-PSGKYLVR 196 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~---~-----------------------------l~~~~-~~~~~l~~ 196 (284)
+.||++||||++++| +|+|++++++++++.+. . +++++ ++++++++
T Consensus 279 ~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~ 358 (459)
T 4a6r_A 279 FQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQK 358 (459)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHH
T ss_pred CCCCeeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 999999999999988 79999999999988775 1 33677 78888888
Q ss_pred HH-Hhc-----------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHH
Q psy11784 197 PL-GIN-----------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENV 254 (284)
Q Consensus 197 ~L-~~~-----------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~i 254 (284)
.| +.+ .|+|+++++..+ ......+++.|+++||++.+++ +++||+||+++|++++
T Consensus 359 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRi~~~~~~t~e~i 435 (459)
T 4a6r_A 359 RWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG---DHIVSAPPLVMTRAEV 435 (459)
T ss_dssp HHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET---TEEEECCCTTCCHHHH
T ss_pred HHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC---CEEEEECCCCCCHHHH
Confidence 88 443 678888888622 1236789999999999999864 8999999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy11784 255 LFIVSTLNRIFTSLQM 270 (284)
Q Consensus 255 d~~~~~l~~~l~~~~~ 270 (284)
++++++|+++++++..
T Consensus 436 ~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 436 DEMLAVAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 12
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=3e-42 Score=322.50 Aligned_cols=264 Identities=23% Similarity=0.394 Sum_probs=203.5
Q ss_pred CcHHHHHHHHHHHc---cC---CccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY---TG---RQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~---~~---r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||++.|+|++|.+ +| |.+||+++++|||.+.+++++++..... . ......+.++|.|+.++++ +.+.++.
T Consensus 114 seA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 192 (448)
T 3dod_A 114 AEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSE-SGDPDEC 192 (448)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSS-SCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCC-ccchhhh
Confidence 58999999999998 88 8999999999999998888776532111 1 1112234457888888877 5444445
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEccee-cCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVF-VVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~-~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...++++|+++++...+++++||+||++ +++|.++++++||++|+++|++||++||+||||+||||+|+ +++++++++
T Consensus 193 ~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~-~~a~~~~~~ 271 (448)
T 3dod_A 193 RDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK-MFACEHENV 271 (448)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGTC
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-hhhhhhcCC
Confidence 5566888999987555679999999998 99999999999999999999999999999999999999998 778899999
Q ss_pred CCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~l 194 (284)
.||++|+||++++|+ |+|++++++++++.+. . +++++++++++
T Consensus 272 ~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~ 351 (448)
T 3dod_A 272 QPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKL 351 (448)
T ss_dssp CCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 999999999999995 9999999999998763 1 33677788888
Q ss_pred HHHHHhc-----------cCceeEEEEecccH----------HHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSITY----------YLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~~~----------~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
++.|+++ .|+++++++..+.. .+..+++.|+++||++.|+ ++++||+||+++|+++
T Consensus 352 ~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~iRi~~~~~~t~e~ 428 (448)
T 3dod_A 352 HFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL---GDVIAFLPPLASTAEE 428 (448)
T ss_dssp HHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE---TTEEEECCCTTCCHHH
T ss_pred HHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc---CCEEEEECCCCCCHHH
Confidence 8888763 58888988852211 1478999999999999875 4899999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
+++++++|+++++++.
T Consensus 429 i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 429 LSEMVAIMKQAIHEVT 444 (448)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 13
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=2.2e-42 Score=324.78 Aligned_cols=253 Identities=20% Similarity=0.279 Sum_probs=208.3
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCC-c-cccc-CCCCCceEEccCCCCcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPR-A-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
|||||.|+|++|.| +||.+||+++++|||.+.++++++.. . +... ........+.|.|... +.
T Consensus 145 seA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~----- 216 (457)
T 3tfu_A 145 SVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRD---YD----- 216 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSS---CC-----
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcc---cC-----
Confidence 58999999999998 89999999999999999998887531 1 1111 1122223345554321 11
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
..++++|++.++++++++++||+|| +++++|.++++++||++|+++|++||++||+||||+||||+|+ +|++++++
T Consensus 217 --~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~-~~a~~~~~ 293 (457)
T 3tfu_A 217 --PAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA-LFAADHAG 293 (457)
T ss_dssp --HHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT
T ss_pred --HHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc-hhHhHhcC
Confidence 1137888888876556799999999 9999999999999999999999999999999999999999998 78999999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch-------h---------------------------hhhHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN-------C---------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~-------~---------------------------l~~~~~~~~~l~ 195 (284)
+.||++||||+++|| +|+|++++++++++.+. . ++++++++++++
T Consensus 294 ~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~ 373 (457)
T 3tfu_A 294 VSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLT 373 (457)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCceEEEEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999 59999999999988773 1 347788899999
Q ss_pred HHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+.|+++ .|+|+++++. ....+.++++.|+++||++.+. ++++||.||+++|++|+++++++|+++
T Consensus 374 ~~L~~l~~~~~v~~vr~~G~~~~i~l~-~~~~~~~~~~~l~~~Gv~v~~~---~~~lRi~p~~~~t~eei~~~l~~L~~~ 449 (457)
T 3tfu_A 374 AGLDTARALPAVTDVRVCGAIGVIECD-RPVDLAVATPAALDRGVWLRPF---RNLVYAMPPYICTPAEITQITSAMVEV 449 (457)
T ss_dssp HHHGGGGGSTTEEEEEECSSCEEEEES-SCCCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeeeeecCCeEEEEEEC-CcccHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 999875 6888888885 3234678999999999999863 589999999999999999999999999
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 450 l~~~ 453 (457)
T 3tfu_A 450 ARLV 453 (457)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9865
No 14
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=4.4e-39 Score=299.08 Aligned_cols=267 Identities=24% Similarity=0.344 Sum_probs=215.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||++.|+|+++.++++.+||+++.+|||.+..+++.++...... ......+..++.|..++.+++++.++....++++
T Consensus 112 ~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~ 191 (433)
T 1zod_A 112 AESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY 191 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence 589999999999888988999999999999998887664332211 1223345567777776666654222222334788
Q ss_pred HHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 80 ARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 80 l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
|++.+++.. +++++|++||+++++|.++++++|+++|+++|++||++||+||||+||||+|. +++++++++.||++++
T Consensus 192 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~-~~~~~~~~~~~di~s~ 270 (433)
T 1zod_A 192 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT-MFACQRDGVTPDILTL 270 (433)
T ss_dssp HHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSEEEE
T ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch-HhHHhhcCCCCCEEEe
Confidence 888887433 46999999999999999999999999999999999999999999999999997 6777888999999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
||++++|+|+|++++++++++.+.. .++++++++++++.|+++
T Consensus 271 sK~~~~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~ 350 (433)
T 1zod_A 271 SKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDC 350 (433)
T ss_dssp CHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cccccCCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999998765532 236777888888888763
Q ss_pred ------cCceeEEEEecc-------cHHHHHHHHHHHHCCcEEeecCCCC--CEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI-------TYYLYRYTRRMKEAKIIVANEGEYG--NVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ------~G~~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~~~~~~~~--~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|.++++++... .....++++.|+++||++.+++.++ +++||+|++.+|++++++++++|+++++
T Consensus 351 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 351 IGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp EEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 477888887421 1346789999999999999887655 8999999999999999999999999987
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
++
T Consensus 431 ~~ 432 (433)
T 1zod_A 431 RA 432 (433)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 15
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=1.3e-38 Score=297.01 Aligned_cols=247 Identities=21% Similarity=0.369 Sum_probs=189.1
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCccc-cc-CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAFM-LS-SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||++.|+|+||+| +||.+||+++++|||.+..++++++.... .. .+....+..+|. ++
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~--------~d--- 200 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY--------DD--- 200 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT--------TC---
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC--------CC---
Confidence 58999999999975 36789999999999998877666542111 00 011112222332 22
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
+++|++.++ .+++++||+||+++++|.++++++++++|+++|++||++||+||||+||||+|. ++++++++
T Consensus 201 ------~~~le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~-~~~~~~~~ 271 (433)
T 1z7d_A 201 ------LEALEEELK--DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK-LLCVHHYN 271 (433)
T ss_dssp ------HHHHHHHHT--STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred ------HHHHHHHhC--CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc-chhhHhcC
Confidence 688888885 356999999999999999999999999999999999999999999999999997 78888999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++|+||++++| +|+|++++++++++.+.. .++++++++++++.|++
T Consensus 272 ~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 351 (433)
T 1z7d_A 272 VKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKR 351 (433)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECccccCCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 899999999999887643 34677888899988876
Q ss_pred c------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 201 N------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 201 ~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+ .|.++++++........++++.|+++||++.+++ .+++|++||+++|++|+++++++|+++++++
T Consensus 352 l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 352 ELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp HHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 3 4778888874221246789999999999999753 5899999999999999999999999998876
Q ss_pred h
Q psy11784 269 Q 269 (284)
Q Consensus 269 ~ 269 (284)
.
T Consensus 430 ~ 430 (433)
T 1z7d_A 430 D 430 (433)
T ss_dssp C
T ss_pred H
Confidence 3
No 16
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=2.5e-38 Score=295.61 Aligned_cols=245 Identities=22% Similarity=0.391 Sum_probs=199.7
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
+||++.|+|++|+| +||.+||+++++|||.+..+.+.++... ... .+....+..+|. ++
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~--------~d--- 211 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY--------ND--- 211 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS--------SC---
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC--------CC---
Confidence 58999999999975 2678999999999999987777654221 110 111122233332 22
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
+++|++.++ .+++++|++||+++++|.++++++++++|+++|++||++||+||||+||||+|+ ++++++++
T Consensus 212 ------~~~le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~-~~~~~~~~ 282 (439)
T 2oat_A 212 ------LPALERALQ--DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR-WLAVDYEN 282 (439)
T ss_dssp ------HHHHHHHTT--STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred ------HHHHHHHhC--CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc-chhHHHhC
Confidence 678888875 346999999999999999999999999999999999999999999999999997 78889999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++| +|+|++++++++++.+.. .++++++++++++.|++
T Consensus 283 ~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 362 (439)
T 2oat_A 283 VRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMK 362 (439)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEecccccCCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 899999999999887643 34778889999999987
Q ss_pred c----------cCceeEEEEeccc-HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSIT-YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+ .|+++++++.... ....++++.|+++||++.+.+ ++++|+.||+.+|++|+++++++|++++++
T Consensus 363 l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 363 LPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp SCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBSS--SSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecCC--CCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 4 5678888874221 236789999999999999743 589999999999999999999999988764
No 17
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-38 Score=296.31 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=200.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccC-CCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSS-EKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||++.|+|++|.++++.+||+++++|||.+..+++.++....... .....+.....++....++++ +++
T Consensus 121 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 191 (434)
T 3l44_A 121 TEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNN---------VET 191 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTC---------HHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCccc---------HHH
Confidence 5899999999999999999999999999999888776543211100 000000000011222233333 688
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
|+++++++++++++||+||+++++|.++++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||++|+|
T Consensus 192 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~-~~~~~~~~~~~di~t~s 269 (434)
T 3l44_A 192 LKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY-GGAQDLLGVTPDLTALG 269 (434)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS-SCHHHHHTCCCSEEEEE
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc-cHHHHHcCCCCCeeehh
Confidence 888887655679999999999999999999999999999999999999999999999 9997 77888999999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 270 K~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 349 (434)
T 3l44_A 270 KVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNI 349 (434)
T ss_dssp GGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999887642 336778888888888764
Q ss_pred ------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|.++++++.. +......+++.|+++||++.+++ .+.+|+ ++++|++|+++++++|++
T Consensus 350 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~rl--~~~~t~e~i~~~l~~l~~ 425 (434)
T 3l44_A 350 DITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK--YEAWFL--TTEHTKEDIEYTIEAVGR 425 (434)
T ss_dssp CEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST--TCCEEC--CTTCCHHHHHHHHHHHHH
T ss_pred CEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC--CCcEEE--ecccCHHHHHHHHHHHHH
Confidence 57788888731 22345778999999999999764 356776 689999999999999999
Q ss_pred HHHHHhh
Q psy11784 264 IFTSLQM 270 (284)
Q Consensus 264 ~l~~~~~ 270 (284)
+++++.+
T Consensus 426 ~l~~~~~ 432 (434)
T 3l44_A 426 AFAALAD 432 (434)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988753
No 18
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=5.7e-38 Score=291.52 Aligned_cols=258 Identities=26% Similarity=0.378 Sum_probs=191.0
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCC--ceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKP--WVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~ 70 (284)
+||++.|+|+++.+ +++.+||+++.+|||.+..+.+++....... ..... .+.++|.++.+++
T Consensus 99 ~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 171 (430)
T 3i4j_A 99 SEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARN------- 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSC-------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccch-------
Confidence 58999999999998 7899999999999999987776654321110 11111 2333555544332
Q ss_pred HHHHHHHHHHHHHHHhcC-CCeeEEEEcceec-CCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc
Q psy11784 71 QAAQKYAQAARNIMEAHR-DNIATLICEPVFV-VHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT 148 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~ 148 (284)
...++++|++.+++.. +.+++|++||+++ ++|.++++++|+++|+++|++||++||+||||+||||+|+ ++++++
T Consensus 172 --~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~ 248 (430)
T 3i4j_A 172 --GAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSR 248 (430)
T ss_dssp --HHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGG
T ss_pred --hhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhh
Confidence 1223678888887543 4599999999999 9999999999999999999999999999999999999997 788899
Q ss_pred c-CCCCcEEEecccccCC-cceeEEEecHHHHHhchh---------------------------------hhhHHHHHHH
Q psy11784 149 Q-GAVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKY 193 (284)
Q Consensus 149 ~-g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~ 193 (284)
+ ++.||++||||++++| +|+|++++++++++.+.. ++++++++++
T Consensus 249 ~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 328 (430)
T 3i4j_A 249 WSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ 328 (430)
T ss_dssp TTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred hcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 9 9999999999999999 999999999999876641 3367777888
Q ss_pred HHHHHHhc------------cCceeEEEEecc--------cHHHHHHHHHHHHCCcEEeec-----CCCCCEEEEEcCCC
Q psy11784 194 LVRPLGIN------------LHIFWCLILLSI--------TYYLYRYTRRMKEAKIIVANE-----GEYGNVLLFLPAMC 248 (284)
Q Consensus 194 l~~~L~~~------------~G~~~~i~~~~~--------~~~~~~~~~~l~~~Gv~~~~~-----~~~~~~lr~~p~l~ 248 (284)
+++.|+++ .|.++++++... ...+.++++.|+++||++.++ +..++++|++|+++
T Consensus 329 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~ 408 (430)
T 3i4j_A 329 LLAGLQALQARFPQMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLS 408 (430)
T ss_dssp HHHHHHHHHHHCTTEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTT
T ss_pred HHHHHHHHHHhCCCeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCC
Confidence 88888764 577888887411 122467999999999999986 22367999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~ 268 (284)
+|++++++++++|+++++++
T Consensus 409 ~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 409 ITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998865
No 19
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=5.1e-38 Score=292.56 Aligned_cols=262 Identities=24% Similarity=0.367 Sum_probs=208.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcc---ccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF---MLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
+||++.|+|++|.++++.+||.++++|||.+..+..+++... +.. ......+.++|.++.+... .. +.+
T Consensus 114 sea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~d 186 (439)
T 3dxv_A 114 SDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDP---TG----DAI 186 (439)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBT---TS----HHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccc---cH----HHH
Confidence 589999999999999999999999999999998887764321 110 0000111223433322111 00 113
Q ss_pred HHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++|++.++ ...+++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+||||+|. +++++++++.||+
T Consensus 187 ~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~-~~~~~~~~~~~di 265 (439)
T 3dxv_A 187 LTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR-LHCFEHEGFVPDI 265 (439)
T ss_dssp HHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS-SSGGGGTTCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhcCCCCCE
Confidence 788888884 33456999999999999999999999999999999999999999999999999997 7788999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
+++||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 266 ~s~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 345 (439)
T 3dxv_A 266 LVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPL 345 (439)
T ss_dssp EEECGGGGTTSCCEEEEEEHHHHTSCSSSSCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEcchhcCCcceEEEEECHHHHhhhcCCCcCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999876542 336777788888888764
Q ss_pred ------cCceeEEEEe-------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILL-------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ------~G~~~~i~~~-------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++++. +.......+++.|+++||++.+++.+++++|++|++.+|++++++++++|+++++++
T Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 346 IGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp EEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred eEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5778888874 234457789999999999999987667999999999999999999999999999887
Q ss_pred hh
Q psy11784 269 QM 270 (284)
Q Consensus 269 ~~ 270 (284)
.+
T Consensus 426 ~~ 427 (439)
T 3dxv_A 426 SA 427 (439)
T ss_dssp GG
T ss_pred hc
Confidence 54
No 20
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=100.00 E-value=3e-38 Score=293.44 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=191.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc-cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML-SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||++.|+|+||.+++|.+||+++++|||.+..++..+...... .......+.....++....++++ +++
T Consensus 119 sea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 189 (429)
T 4e77_A 119 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYND---------LAS 189 (429)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTC---------HHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCC---------HHH
Confidence 58999999999999999999999999999998665443221100 00000000000111222333443 788
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
|+++++++++++++|++||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||++|+|
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~-~~~~~~~~~~pdi~t~s 267 (429)
T 4e77_A 190 VRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL-AGAQDYYHVIPDLTCLG 267 (429)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT-TCHHHHTTCCCSEEEEE
T ss_pred HHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc-chHHHhcCCCCCeeeec
Confidence 899998666679999999999999999999999999999999999999999999999 9997 78889999999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 268 K~~~~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 347 (429)
T 4e77_A 268 KIIGGGMPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENI 347 (429)
T ss_dssp GGGGTTSCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCCCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999987652 346778888888888764
Q ss_pred ------cCceeEEEEecc-------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI-------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 202 ------~G~~~~i~~~~~-------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
.|+|+++++... ......+++.|+++||++.+++. ..+ .+++.+|++|+++++++|+
T Consensus 348 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~--~~~~~~t~e~i~~~l~~l~ 423 (429)
T 4e77_A 348 PLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF--EAG--FMSLAHSNEDIQKTVNAAR 423 (429)
T ss_dssp CCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT--SCE--ECCTTCCHHHHHHHHHHHH
T ss_pred ceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC--CCE--EEeccCCHHHHHHHHHHHH
Confidence 578888887522 13457899999999999997642 344 4589999999999999999
Q ss_pred HHHHH
Q psy11784 263 RIFTS 267 (284)
Q Consensus 263 ~~l~~ 267 (284)
+++++
T Consensus 424 ~~l~~ 428 (429)
T 4e77_A 424 RCFAK 428 (429)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88753
No 21
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=100.00 E-value=3.9e-38 Score=296.98 Aligned_cols=256 Identities=18% Similarity=0.286 Sum_probs=193.8
Q ss_pred CcHHHHHHHHHHHcc------------------------C--CccEEEEcCCCcccchhhhcCCCCccc-c-cCCCCCce
Q psy11784 1 SEANDLALQLARAYT------------------------G--RQNIVVVDAAYHGTVNLLLDISPRAFM-L-SSEKKPWV 52 (284)
Q Consensus 1 seA~e~AlklAr~~~------------------------~--r~~il~~~~~yHG~t~~~~~~~~~~~~-~-~~~~~~~~ 52 (284)
|||||+|+|+||+|+ | |.+||+|+++|||++.+++++++.... . .....++
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~- 215 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW- 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC-
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC-
Confidence 589999999998652 5 689999999999999999887754321 1 1111111
Q ss_pred EEccCCCCcCCCCCCCc---hHHHHHHHHHHHHHHHhcCC---CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCE
Q psy11784 53 HVIPFPDTYRGEFSADD---PQAAQKYAQAARNIMEAHRD---NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGV 126 (284)
Q Consensus 53 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~i~~~~~---~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~l 126 (284)
.++|+|. ++++..... +.....++++|+++++.+.+ ++++||+||+++++|.++++++||++|+++|++||++
T Consensus 216 ~~~~~p~-~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 294 (472)
T 1ohv_A 216 PIAPFPR-LKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA 294 (472)
T ss_dssp CEECCCC-CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred cccCCCc-ccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence 2234442 232211110 11223357889988874322 6999999999999999999999999999999999999
Q ss_pred EEEecccccCccccCccccccccCCC--CcEEEeccc-ccCCcceeEEEecHHHHHhchh--------------------
Q psy11784 127 VIADEIQCGMGRSGSHFWAFQTQGAV--PDIITVGKP-MGNGMPIGAVITSRKIAESLNC-------------------- 183 (284)
Q Consensus 127 lI~DEv~tG~gr~G~~~~a~~~~g~~--pDiv~~sK~-l~~G~p~gav~~~~~i~~~~~~-------------------- 183 (284)
||+||||+||||+|. +|+++++|+. ||++||||+ ++||+++ ++++.. +..
T Consensus 295 li~DEv~~g~g~~g~-~~~~~~~gv~~~~Di~t~sK~~l~GG~~~-----~~~~~~-~~~~~~~~T~~~~~~~~aaa~aa 367 (472)
T 1ohv_A 295 FLVDEVQTGGGSTGK-FWAHEHWGLDDPADVMTFSKKMMTGGFFH-----KEEFRP-NAPYRIFNTWLGDPSKNLLLAEV 367 (472)
T ss_dssp EEEECTTTTTTTTSS-SSGGGGGCCSSCCSEEEECGGGSSEEEEE-----CGGGSC-SSSSSSCCSSSSCHHHHHHHHHH
T ss_pred EEEeCcccCCCCCCC-chhccccCCCCCCCEEEEccccccCCccC-----chhhcc-cccccccCccCccHHHHHHHHHH
Confidence 999999999999997 7889999987 999999999 7876543 444421 111
Q ss_pred ---------hhhHHHHHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEE
Q psy11784 184 ---------LDDNRPSGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVL 241 (284)
Q Consensus 184 ---------l~~~~~~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~l 241 (284)
.+++++++++|+++|+++ .|+|+++++. .......+++.|+++||++.+++ .++|
T Consensus 368 l~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~Gv~~~~~g--~~~i 444 (472)
T 1ohv_A 368 INIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTP-DESIRNKLISIARNKGVMLGGCG--DKSI 444 (472)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECS-SHHHHHHHHHHHHHTTEECEEET--TTEE
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeC-ChhHHHHHHHHHHHCCeEEecCC--CCEE
Confidence 347788888998888763 3667777663 33456789999999999999854 5799
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 242 LFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 242 r~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
||+||+++|++||++++++|+++++++
T Consensus 445 Ri~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 445 RFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999988653
No 22
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=100.00 E-value=1.4e-37 Score=291.27 Aligned_cols=256 Identities=20% Similarity=0.306 Sum_probs=201.9
Q ss_pred CcHHHHHHHHHHHccC------------CccEEEEcCCCcccchhhhcCCCC--ccccc-CCCCCceEEccCCC--CcCC
Q psy11784 1 SEANDLALQLARAYTG------------RQNIVVVDAAYHGTVNLLLDISPR--AFMLS-SEKKPWVHVIPFPD--TYRG 63 (284)
Q Consensus 1 seA~e~AlklAr~~~~------------r~~il~~~~~yHG~t~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~--~~~~ 63 (284)
|||++.|+|+||.|++ +.+||+++++|||.+.+++++++. ..... ..+...+.++|.++ ...+
T Consensus 129 seA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 208 (449)
T 2cjg_A 129 ALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEP 208 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcc
Confidence 5899999999998876 789999999999999988887754 11111 11222233344333 1100
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcc
Q psy11784 64 EFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHF 143 (284)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~ 143 (284)
. .......++++|++.++.+.+++++|++||+++++|.++++++|+++|+++|++||++||+||||+||||+|. +
T Consensus 209 ~----~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~ 283 (449)
T 2cjg_A 209 A----MAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-A 283 (449)
T ss_dssp H----HHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-S
T ss_pred c----cchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc-c
Confidence 0 0111234567788888755567999999999999999999999999999999999999999999999999997 7
Q ss_pred ccccccCCCCcEEEecccccCCcceeEEEecHHHHHh-----chh-----------------------------hhhHHH
Q psy11784 144 WAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAES-----LNC-----------------------------LDDNRP 189 (284)
Q Consensus 144 ~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~-----~~~-----------------------------l~~~~~ 189 (284)
|+++++++.||++|+||++ |+|++++++++++. +.. .+++++
T Consensus 284 ~~~~~~~~~~di~t~sK~l----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~ 359 (449)
T 2cjg_A 284 WAYQQLDVAPDIVAFGKKT----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQ 359 (449)
T ss_dssp STHHHHTCCCSEEEECGGG----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred eeecccCCCceEEEecCcc----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 7888889999999999999 89999999999875 211 336778
Q ss_pred HHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHH
Q psy11784 190 SGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 190 ~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~ 256 (284)
+++++++.|+++ .|.|+++++. .......+++.|+++||++.+++ .+++|++||+++|+++|++
T Consensus 360 ~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~Gv~v~~~g--~~~iRi~~~~~~t~e~i~~ 436 (449)
T 2cjg_A 360 HGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLP-TTADRDELIRQLWQRAVIVLPAG--ADTVRFRPPLTVSTAEIDA 436 (449)
T ss_dssp HHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECS-SHHHHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEEC-ChHHHHHHHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHH
Confidence 888999888753 4667777763 33356789999999999999864 5899999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTSL 268 (284)
Q Consensus 257 ~~~~l~~~l~~~ 268 (284)
++++|+++++++
T Consensus 437 ~l~~l~~~l~~~ 448 (449)
T 2cjg_A 437 AIAAVRSALPVV 448 (449)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 23
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=100.00 E-value=3.9e-38 Score=292.83 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=199.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||++.|+|++|.++++.+||.++++|||.+.+++..++...... +.... ......++....++++ ++
T Consensus 119 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d---------~~ 188 (429)
T 3k28_A 119 TEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPG-VPEGVAKNTITVAYND---------LE 188 (429)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTT-CCHHHHTTEEEEETTC---------HH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCC-CCCcccCceeecCCCC---------HH
Confidence 589999999999999999999999999999988876654321110 00000 0000001112223333 67
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
+|+++++++++++++||+||+++++|.++++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||++|+
T Consensus 189 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~~~~di~t~ 266 (429)
T 3k28_A 189 SVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY-NCGQGYYGVTPDLTCL 266 (429)
T ss_dssp HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST-THHHHHHTCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chHHHHhCCCCceehh
Confidence 8888887655679999999999999999999999999999999999999999999999 9997 7788899999999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 267 sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 346 (429)
T 3k28_A 267 GKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEKHGI 346 (429)
T ss_dssp CGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999987632 336778888888888774
Q ss_pred ------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|.++++++.. +......+++.|+++||++.+++ .+.+|+ ++++|++++++++++|++
T Consensus 347 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~r~--~~~~t~e~i~~~l~~l~~ 422 (429)
T 3k28_A 347 PHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ--FEGLFL--STVHSDADIEATIAAAEI 422 (429)
T ss_dssp CCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST--TSCBCC--CTTCCHHHHHHHHHHHHH
T ss_pred CEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC--CCCEEE--ECCCCHHHHHHHHHHHHH
Confidence 57788888741 22345788999999999999754 356666 789999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 423 ~l~~~ 427 (429)
T 3k28_A 423 AMSKL 427 (429)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 98764
No 24
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.9e-37 Score=281.88 Aligned_cols=243 Identities=24% Similarity=0.388 Sum_probs=200.3
Q ss_pred CcHHHHHHHHHHHc-----cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAY-----TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~-----~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
+||++.|+++++.+ +++.+||+++.+|||.+..+.+.+.... ... ......+..+|.+ +
T Consensus 103 ~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d------ 168 (395)
T 3nx3_A 103 TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN--------D------ 168 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT--------C------
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC--------C------
Confidence 58999999999998 7889999999999999988887765321 111 1111222233322 2
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
+++|++.++ +++++|++||+++++|.++++++++++|+++|++||++||+||||+||||+|. +++++++++.|
T Consensus 169 ---~~~l~~~l~---~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~~~~ 241 (395)
T 3nx3_A 169 ---ISSVEKLVN---EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK-FFAYEHAQILP 241 (395)
T ss_dssp ---HHHHHTTCC---TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCC
T ss_pred ---HHHHHHhcc---CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc-chhHHhcCCCC
Confidence 677777664 56999999999999999999999999999999999999999999999999997 78889999999
Q ss_pred cEEEecccccCCcceeEEEecHHH-HHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKI-AESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i-~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
|++|+||++++|+|+|++++++++ ++.+.. +++++++++++++.|+++
T Consensus 242 d~~t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 321 (395)
T 3nx3_A 242 DIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELIN 321 (395)
T ss_dssp SEEEECGGGTTTSCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEecccccCCCceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 777643 235667777888877664
Q ss_pred ----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++++++. .......+++.|+++||++.+++ .+++||+|++.+|++++++++++|++++++
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 322 EFDFCKKRKGLGFMQGLSLD-KSVKVAKVIQKCQENALLLISCG--ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp HCTTEEEEEEETTEEEEEEC-TTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hCCCeEEEEeEEEEEEEEeC-CcchHHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4778888884 32356789999999999999864 689999999999999999999999998763
No 25
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=100.00 E-value=1.2e-37 Score=289.12 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=199.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc-cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML-SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||++.|+|+||.++++.+||+++++|||.+..+...+...... .......+.....++....++++ +++
T Consensus 118 sea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 188 (427)
T 3fq8_A 118 TEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYND---------LEA 188 (427)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTC---------HHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCC---------HHH
Confidence 58999999999999999999999999999998877665432110 00000000000001122223333 788
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
|+++++.+++++++|++||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|. +++.+++++.||++++|
T Consensus 189 le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~~~~di~t~s 266 (427)
T 3fq8_A 189 VKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY-GGVQEKFGVTPDLTTLG 266 (427)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT-THHHHHTTCCCSEEEEC
T ss_pred HHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chhhHhcCCCCChhhhh
Confidence 999998766679999999999999999999999999999999999999999999999 9997 67888999999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 267 K~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (427)
T 3fq8_A 267 KIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGH 346 (427)
T ss_dssp GGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999987652 346778888888888764
Q ss_pred ------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+++++++.. +......+++.|+++||++.+++. . |+.+++.+|++|+++++++|++
T Consensus 347 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~--~--r~~~~~~~t~e~i~~~l~~l~~ 422 (427)
T 3fq8_A 347 AACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF--E--AGFTSLAHTEEDIDATLAAART 422 (427)
T ss_dssp CCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--S--CEECCTTCCHHHHHHHHHHHHH
T ss_pred CeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC--C--CEEeeCcCCHHHHHHHHHHHHH
Confidence 57788888742 112356789999999999997542 2 6778999999999999999999
Q ss_pred HHHH
Q psy11784 264 IFTS 267 (284)
Q Consensus 264 ~l~~ 267 (284)
++++
T Consensus 423 ~l~~ 426 (427)
T 3fq8_A 423 VMSA 426 (427)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 26
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=100.00 E-value=1.3e-40 Score=312.51 Aligned_cols=237 Identities=22% Similarity=0.268 Sum_probs=194.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|||||+|+|+||.+|||.+||+|+++|||++.+++ ++ ... .+.+. +.+..+|++ +++|
T Consensus 166 seA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~--sg-~~~--~g~~~--------~~~~~~~~d---------~~~l 223 (465)
T 2yky_A 166 TEANLMALATATAITGRKTVLAFDGGYHGGLLNFA--SG-HAP--TNAPY--------HVVLGVYND---------VEGT 223 (465)
Confidence 69999999999999999999999999999998877 22 000 11111 222233443 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecc
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK 160 (284)
+++++++++++++||+||+++++|.++++++|+++|+++|++||++||+||||+ | |+|. +++++++|+.||++||||
T Consensus 224 ~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~-~~a~~~~gv~pDi~t~sK 300 (465)
T 2yky_A 224 ADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSG-GGAQEMLGISADLTTLGK 300 (465)
Confidence 888875545799999999999999999999999999999999999999999999 7 9997 789999999999999999
Q ss_pred cccCCcceeEEEecHHHHHhchh----------------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 161 PMGNGMPIGAVITSRKIAESLNC----------------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 161 ~l~~G~p~gav~~~~~i~~~~~~----------------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
++++|+|+|++++++++++.+.. .+++++++++++++|+++
T Consensus 301 ~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 380 (465)
T 2yky_A 301 YIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQ 380 (465)
Confidence 99999999999999999875421 347788888888888775
Q ss_pred -------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 202 -------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
.|+|+++++.. +......+++.|+++||++.|++. .. ||+++|++|||+++++|+
T Consensus 381 ~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~-~~-----~s~~~t~edid~~l~~l~ 454 (465)
T 2yky_A 381 APLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGM-YA-----LSLEIADAGRDAFAEALA 454 (465)
Confidence 57888888752 112356789999999999998652 22 889999999999999999
Q ss_pred HHHHHH
Q psy11784 263 RIFTSL 268 (284)
Q Consensus 263 ~~l~~~ 268 (284)
++++++
T Consensus 455 ~~l~~~ 460 (465)
T 2yky_A 455 DFIGEQ 460 (465)
Confidence 998775
No 27
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=2e-36 Score=280.94 Aligned_cols=245 Identities=24% Similarity=0.438 Sum_probs=198.4
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
+||++.|+|+++.+ +|+.+||+++.+|||.+..+.+.++... ... .+....+..+|. ++
T Consensus 124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~--------~d----- 190 (420)
T 2pb2_A 124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF--------ND----- 190 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT--------TC-----
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC--------CC-----
Confidence 58999999999987 6888999999999999987766554321 110 111122223332 22
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
+++|++.+. +++++|++||+++.+|.++++++++++|+++|++||++||+||+|+||||+|+ +++++.+++.
T Consensus 191 ----~~~le~~i~---~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~-~~~~~~~~~~ 262 (420)
T 2pb2_A 191 ----LHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD-LFAYMHYGVT 262 (420)
T ss_dssp ----HHHHHHHCC---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHTCC
T ss_pred ----HHHHHHHhc---cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc-HHHHHhcCCC
Confidence 677887775 46999999999999998899999999999999999999999999999999997 6777888999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
||++++||++++|+|+|++++++++++.+.. .++++++++++.+.|+++
T Consensus 263 ~diit~sK~l~~G~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 342 (420)
T 2pb2_A 263 PDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDE 342 (420)
T ss_dssp CSEEEECGGGGTTSCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecccccCCCceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999887643 336778888888888763
Q ss_pred ----------cCceeEEEEeccc-HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ----------LHIFWCLILLSIT-YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ----------~G~~~~i~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++++.... ....++++.|+++||++.+++ .+++|++||+.+|++|+++++++|+++++++
T Consensus 343 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~--~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 343 QFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5778888874211 146789999999999999864 5899999999999999999999999998765
No 28
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=100.00 E-value=9.9e-37 Score=283.64 Aligned_cols=250 Identities=25% Similarity=0.314 Sum_probs=195.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc-----ccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM-----LSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|||+++|+|+||.++++.+||+++++|||.+.++++.++.... ...+.+.. ..++.+..++++
T Consensus 122 seA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~----~~~~~~~~~~~d-------- 189 (434)
T 2epj_A 122 TEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEA----VARLTLVTPYND-------- 189 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHH----HHTTEEEEETTC--------
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCc----ccCceEecCCCC--------
Confidence 5899999999999999999999999999999877755432100 00111100 000111112222
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++|++.+++.++++++||+||+++++|.++++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||+
T Consensus 190 -~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di 266 (434)
T 2epj_A 190 -VEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFNIEGDI 266 (434)
T ss_dssp -HHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHTCCCSE
T ss_pred -HHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhCCCCCe
Confidence 678888887544569999999999999999999999999999999999999999999999 8887 6788889999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+++||++++|+|+|++++++++++.+.. .++++++++++++.|+++
T Consensus 267 ~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 346 (434)
T 2epj_A 267 IVLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLD 346 (434)
T ss_dssp EEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999876532 236778888888888763
Q ss_pred ----------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 202 ----------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 202 ----------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.|.++++++... .....++++.|+++||++.+++. . |+.+++.+|++|++++++
T Consensus 347 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~--~~~~~~~~t~e~i~~~l~ 422 (434)
T 2epj_A 347 RTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL--E--AVFTGLPHQGEALEIAVE 422 (434)
T ss_dssp HHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--S--CEECCTTCSHHHHHHHHH
T ss_pred hCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC--C--cEEEeccCCHHHHHHHHH
Confidence 567888887421 23467899999999999997642 3 356789999999999999
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
+|+++++++.
T Consensus 423 ~l~~~l~~~~ 432 (434)
T 2epj_A 423 GLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 29
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=6.4e-36 Score=279.32 Aligned_cols=264 Identities=20% Similarity=0.298 Sum_probs=205.6
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCC-CCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFS-ADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 71 (284)
|||++.|+|+++.|+ ++.+||+++.+|||.+..++..++... +.. ......+..++.|..++..+. .|.++
T Consensus 120 sea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~ 199 (449)
T 3a8u_X 120 SECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKE 199 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHH
Confidence 589999999999876 678999999999999887666554221 110 111223445666654443221 12122
Q ss_pred HHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++|++.+++.+ +++++|++||+++++|.++++++|+++|+++|++||++||+||||+||||+|. ++++++++
T Consensus 200 ~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~ 278 (449)
T 3a8u_X 200 GGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFG 278 (449)
T ss_dssp SHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcC
Confidence 33345788888887543 46999999999999999999999999999999999999999999999999997 67888889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch-----------h---------------------------hhhHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN-----------C---------------------------LDDNRPSG 191 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~-----------~---------------------------l~~~~~~~ 191 (284)
+.||++++||++++| +|+|++++++++++.+. . .+++++++
T Consensus 279 ~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~ 358 (449)
T 3a8u_X 279 VTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVA 358 (449)
T ss_dssp CCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred CCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999 89999999998877541 1 23677888
Q ss_pred HHHHHHHHhc-----------cCceeEEEEeccc--H--HHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHH
Q psy11784 192 KYLVRPLGIN-----------LHIFWCLILLSIT--Y--YLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 192 ~~l~~~L~~~-----------~G~~~~i~~~~~~--~--~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~ 256 (284)
+++++.|+++ .|.++++++.... . ....+.+.|+++||++.+++ +++|++||+.+|++++++
T Consensus 359 ~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRis~~~~~t~~~i~~ 435 (449)
T 3a8u_X 359 PHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG---DTLQFGPTFNSKPQDLDR 435 (449)
T ss_dssp HHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET---TEEEECCCTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC---CEEEEECCCcCCHHHHHH
Confidence 8898888763 4677788875221 1 23468899999999999863 899999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTSL 268 (284)
Q Consensus 257 ~~~~l~~~l~~~ 268 (284)
++++|+++++++
T Consensus 436 ~l~~l~~~l~~~ 447 (449)
T 3a8u_X 436 LFDAVGEVLNKL 447 (449)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 30
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.9e-35 Score=271.27 Aligned_cols=261 Identities=20% Similarity=0.366 Sum_probs=204.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCC----c-hHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSAD----D-PQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~-~~~ 72 (284)
+||++.|+++++.++ +.+||+++.+|||.+..+.++++.. ++.. ......+..+|.++.++.+++.+ + ++.
T Consensus 114 ~ea~~~ai~~~~~~~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~ 192 (419)
T 2eo5_A 114 TEAIEASIKVVKNTG-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELV 192 (419)
T ss_dssp HHHHHHHHHHHHTTS-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHH
T ss_pred HHHHHHHHHHHHHhh-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhH
Confidence 589999999999887 6789999999999998877665432 1111 11222345567666555443321 0 111
Q ss_pred HHHHHHHHH-HHHHhcC--CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc
Q psy11784 73 AQKYAQAAR-NIMEAHR--DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ 149 (284)
Q Consensus 73 ~~~~~~~l~-~~i~~~~--~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~ 149 (284)
. .++++|+ +.++... +++++|++||+++++|.++++++++++|+++|++||++||+||||+||||+|. +++++++
T Consensus 193 ~-~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~-~~~~~~~ 270 (419)
T 2eo5_A 193 N-RVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK-LFAIENF 270 (419)
T ss_dssp H-HHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGG
T ss_pred H-HHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc-hhhHHhc
Confidence 1 3467888 8887432 35899999999999999999999999999999999999999999999999997 6777888
Q ss_pred CCCCcEEEecccccCC-cceeEEEecHHHHHhchh--------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 150 GAVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC--------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 150 g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~--------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
++.||++|+||++++| +|+|+++++++++ .+.. .++++++++++.+.|+++
T Consensus 271 ~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~~ 349 (419)
T 2eo5_A 271 NTVPDVITLAKALGGGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGLA 349 (419)
T ss_dssp TCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCCCEEEecccccCCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999 9999999999876 5531 236777888888888763
Q ss_pred -----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++++.+...... +++.|+++||++.+++ .+++||+|++.+|++++++++++|+++++++
T Consensus 350 ~~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~--~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 350 DDVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG--RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp SEEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred hheEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 57888888742223356 8899999999999865 5799999999999999999999999988653
No 31
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=2e-35 Score=273.98 Aligned_cols=244 Identities=25% Similarity=0.305 Sum_probs=189.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc-----cCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML-----SSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
+||++.|+|+||.++++.+||+++++|||.+..+++.++..... ..+.+. ...++.+..++++
T Consensus 118 ~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~----~~~~~~~~~~~~d-------- 185 (424)
T 2e7u_A 118 TEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPE----EYAKLTLVLEYND-------- 185 (424)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCH----HHHTTEEEECTTC--------
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCC----ccCCceEeCCCCC--------
Confidence 58999999999999999999999999999998776544221000 011100 0001111222332
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++|++.+++.++++++||+||+++++|.++++++|+++|+++ ++||++||+||||+|| |+|. +++++++++.||+
T Consensus 186 -~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di 261 (424)
T 2e7u_A 186 -PEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF-GGATELLGLKPDL 261 (424)
T ss_dssp -HHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST-THHHHHHTCCCSE
T ss_pred -HHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch-hHHHHHhCCCcch
Confidence 6788888874445699999999999999999999999999999 9999999999999999 8886 6788889999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
+++||++++|+|+|++++++++++.+.. .++++++++++++.|+++
T Consensus 262 ~s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 341 (424)
T 2e7u_A 262 VTLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVL 341 (424)
T ss_dssp EEECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhCCcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999886532 225667788888888763
Q ss_pred -----------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 202 -----------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 202 -----------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
.|.++++++... .....++++.|+++||++.+++. . |+.+++++|++++++++
T Consensus 342 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~--~~~~~~~~t~~~i~~~l 417 (424)
T 2e7u_A 342 KEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF--E--AAFLSVAHREEDVEKTL 417 (424)
T ss_dssp HHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS--S--CEECCTTCCHHHHHHHH
T ss_pred HhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC--C--ceEeeccCCHHHHHHHH
Confidence 567778877421 23466899999999999997642 2 35568999999999999
Q ss_pred HHHHHH
Q psy11784 259 STLNRI 264 (284)
Q Consensus 259 ~~l~~~ 264 (284)
++|+++
T Consensus 418 ~~l~~~ 423 (424)
T 2e7u_A 418 EALRKA 423 (424)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
No 32
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=9.2e-34 Score=263.09 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=197.7
Q ss_pred CcHHHHHHHHHHHccC-----CccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcC-CCCCCCchH
Q psy11784 1 SEANDLALQLARAYTG-----RQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYR-GEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~~-----r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~ 71 (284)
+||++.|+++++.+++ +.+||+++.+|||.+..+.++++.. .... .........+|.|.... ..+.. .
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 189 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDE--R- 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCG--G-
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchH--H-
Confidence 5899999999988765 7789999999999988777665421 1111 11112233455543211 01110 0
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.+++|++.+++..+++++|++||+ ++.+|.++++++++++|+++|++||++||+||+|+||||+|. ++++++++
T Consensus 190 ----d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~-~~~~~~~~ 264 (429)
T 1s0a_A 190 ----DMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK-LFACEHAE 264 (429)
T ss_dssp ----GGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred ----HHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch-HHHhhhcC
Confidence 157788888754456999999999 999999999999999999999999999999999999999997 66778889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh----------------------------------hhhHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC----------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~----------------------------------l~~~~~~~~~l~ 195 (284)
+.||++++||++++| +|+|++++++++++.+.. .+++++++++++
T Consensus 265 ~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~ 344 (429)
T 1s0a_A 265 IAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLR 344 (429)
T ss_dssp CCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999 899999999988764311 236777888898
Q ss_pred HHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+.|+++ .|.++++++. .......+.+.|+++||++.+. ++++|++||+.+|++|+++++++|+++
T Consensus 345 ~~L~~l~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~l~~~Gi~v~~~---~~~iRis~~~~~t~e~i~~~~~~l~~~ 420 (429)
T 1s0a_A 345 EQLAPARDAEMVADVRVLGAIGVVETT-HPVNMAALQKFFVEQGVWIRPF---GKLIYLMPPYIILPQQLQRLTAAVNRA 420 (429)
T ss_dssp HHHGGGGGCTTEEEEEEETTEEEEEES-SCBCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeeEEEEEEEC-CcccHHHHHHHHHHCCCEEecc---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 888763 3566677763 2224567889999999999863 479999999999999999999999988
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 421 ~~~~ 424 (429)
T 1s0a_A 421 VQDE 424 (429)
T ss_dssp TSSG
T ss_pred HHhh
Confidence 7654
No 33
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=100.00 E-value=4.9e-34 Score=267.00 Aligned_cols=249 Identities=20% Similarity=0.243 Sum_probs=179.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
+||++.|+++||.++++.+||.++++|||.+..+...++..+..+ .+.+. ...++.+..++++ ++
T Consensus 123 ~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~d---------~~ 189 (453)
T 2cy8_A 123 TETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLP----ETTANTLLIRPDD---------IE 189 (453)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECC--------------------------------CGGGEEEECTTC---------HH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCc----cccCceeecCCCC---------HH
Confidence 589999999999999999999999999999987765442211000 01100 0001111222332 67
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
+|++.++++++++++|++||+++++|.++++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||++++
T Consensus 190 ~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~di~s~ 267 (453)
T 2cy8_A 190 GMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPDLTCL 267 (453)
T ss_dssp HHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCSEEEE
T ss_pred HHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCcEEEE
Confidence 8888887544569999999999998999999999999999999999999999999999 8887 6788888999999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-------------------------hh---------hHHHHHHHHHHHHHhc---
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-------------------------LD---------DNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-------------------------l~---------~~~~~~~~l~~~L~~~--- 201 (284)
||++++|+|+|++++++++++.+.. ++ +++++++++++.|+++
T Consensus 268 sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 347 (453)
T 2cy8_A 268 AKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFAR 347 (453)
T ss_dssp EGGGGTTSSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998875421 22 3455677777777653
Q ss_pred ---------cCceeEEEEec-----c-------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHH
Q psy11784 202 ---------LHIFWCLILLS-----I-------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENV 254 (284)
Q Consensus 202 ---------~G~~~~i~~~~-----~-------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~i 254 (284)
.|.++++++.. . .....++++.|+++||++.+ + +.+ .+++.+|++++
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~---~-~~~--~l~~~~t~~~i 421 (453)
T 2cy8_A 348 KGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGG---R-GSV--FLSAQHEREHV 421 (453)
T ss_dssp TTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBT---T-TEE--ECCTTCCHHHH
T ss_pred CCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeC---C-CCE--EeeccCCHHHH
Confidence 56788888842 1 12367799999999999954 2 234 45899999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy11784 255 LFIVSTLNRIFTSLQM 270 (284)
Q Consensus 255 d~~~~~l~~~l~~~~~ 270 (284)
++++++|+++++++..
T Consensus 422 ~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 422 EHLVTTFDRVLDRLAD 437 (453)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=8.2e-33 Score=255.78 Aligned_cols=260 Identities=23% Similarity=0.372 Sum_probs=202.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
+||++.|+++||.++++.+|+.++.+|||.+..+...++.. ++.. ......+..+|.+..++. .+ ....+
T Consensus 112 ~~a~~~~~~~a~~~~~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~---~~----~~~d~ 184 (426)
T 1sff_A 112 SEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG---IS----EDDAI 184 (426)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGT---BC----HHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccc---cc----hHHHH
Confidence 58999999999988887799999999999987655544321 1110 111112334555432111 00 11126
Q ss_pred HHHHHHHHhc--CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~~--~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
++|++.++.. ++++++|++||+++++|...+|++++++|.++|++||++||+||+|+||+++|. +++++.+++.||+
T Consensus 185 ~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~di 263 (426)
T 1sff_A 185 ASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT-LFAMEQMGVAPDL 263 (426)
T ss_dssp HHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTTSCCSE
T ss_pred HHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc-hhhhhhcCCCCCE
Confidence 7788888632 245899999999999888999999999999999999999999999999999997 6677888899999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+++||++++|+|+|++++++++++.+.. .++++++++++++.|+++
T Consensus 264 ~s~sK~~~~GlriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 343 (426)
T 1sff_A 264 TTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP 343 (426)
T ss_dssp EEECGGGGTSSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEEcccccCCCceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999887652 236677788888888663
Q ss_pred -------cCceeEEEEec-------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS-------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++++++.. ......++++.|+++||++.++..+.+++|++|++.+|++++++++++|++++++
T Consensus 344 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 344 EIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp TEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 46777888741 2245678999999999999987766789999999999999999999999999876
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 424 ~ 424 (426)
T 1sff_A 424 A 424 (426)
T ss_dssp H
T ss_pred H
Confidence 5
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.5e-32 Score=251.61 Aligned_cols=239 Identities=24% Similarity=0.411 Sum_probs=195.2
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
+||++.|+++++.+ +++.+|++++.+|||.+..+.+++...... . .......... ++++
T Consensus 103 t~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d--- 171 (392)
T 3ruy_A 103 AEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI--------PYGD--- 171 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE--------CTTC---
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee--------Cccc---
Confidence 58999999999987 678899999999999998887765432111 0 1111111112 2222
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.++|++.++ +++++|++||+++..|.+.++++|+++|.++|++||++||+||+|+|||++|. +++.+.++
T Consensus 172 ------~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~ 241 (392)
T 3ruy_A 172 ------LEALKAAIT---PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK-VFACDWDN 241 (392)
T ss_dssp ------HHHHHHHCC---TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred ------HHHHHHHhc---cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc-chhhhccC
Confidence 677888775 57999999999999999999999999999999999999999999999999997 67888889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||+++|| +|+|++++++++++.+.. .++++++++++.+.|++
T Consensus 242 ~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 242 VTPDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp CCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEchhhhCChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 899999999999887653 23677788888888877
Q ss_pred c----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|.++.+.+. . ...++++.|+++||++.+++ .+.+|++|++.+|++++++++++|++++
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~~-~--~~~~l~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 322 IDNPMITEVRGKGLFIGIELN-E--PARPYCEQLKAAGLLCKETH--ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCCTTEEEEEEETTEEEEEES-S--CSHHHHHHHHTTTEECCCBT--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hcCCCceEEEeeeeEEEEEEc-c--hHHHHHHHHHHCCcEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 5 4666677663 2 56788999999999999754 5899999999999999999999998875
No 36
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.5e-32 Score=252.22 Aligned_cols=247 Identities=23% Similarity=0.411 Sum_probs=200.1
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
+||++.|+++++.+ +|+.+|+..+.+|||.+..+...+...... . ......+..+|.+ +
T Consensus 106 ~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d----- 172 (406)
T 4adb_A 106 AEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN--------D----- 172 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT--------C-----
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC--------c-----
Confidence 58999999999987 788999999999999987776655432111 0 1111222223322 2
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
+++|++.++ +++++|+++|+++.||.++++.+++++|.++|++||++||+||+|+|||++|. .++.+.+++.
T Consensus 173 ----~~~l~~~l~---~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~ 244 (406)
T 4adb_A 173 ----INSASALID---DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE-LYAYMHYGVT 244 (406)
T ss_dssp ----HHHHHTTCS---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHTCC
T ss_pred ----HHHHHHHhc---CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hHHHHhcCCC
Confidence 567777664 56999999999999999999999999999999999999999999999999997 6777888999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
||++++||++++|+|+|++++++++++.+.. .++++++++++.+.|+++
T Consensus 245 ~d~~t~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 324 (406)
T 4adb_A 245 PDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINH 324 (406)
T ss_dssp CSEEEECGGGGTTSCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEechhhcCCCCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887653 236677788888888764
Q ss_pred ----------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 202 ----------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 202 ----------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|.++++++... .....++++.|+++||++.+++ .+.+|+.|++.+|++++++++++|+++++++.+
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 325 RYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp HHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC--CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467778877421 1247789999999999999854 689999999999999999999999999988754
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=5.7e-30 Score=234.94 Aligned_cols=242 Identities=26% Similarity=0.475 Sum_probs=188.6
Q ss_pred CcHHHHHHHHHHHc-----cCCccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAY-----TGRQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~-----~~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
+||++.|++.++.+ +++.+|+.++.+|||.+..+....+.. .... ......+..+|. ++
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~--------~d------ 172 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF--------NN------ 172 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT--------TC------
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC--------CC------
Confidence 48999999998876 577789999999999887554443321 0000 111112222332 11
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
.++|++.++ +++++|++||+++..|.++++.+++++|.++|++||++||+||+|+||+++|+ .+..+.+++.|
T Consensus 173 ---~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~ 245 (397)
T 2ord_A 173 ---VEDLRRKMS---EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK-LFAYQKYGVVP 245 (397)
T ss_dssp ---HHHHHHHCC---TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCC
T ss_pred ---HHHHHHHhh---cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc-chhhhhhCCCC
Confidence 677777775 46999999999999998788999999999999999999999999999999887 56666778889
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|++++||++++|+|+|+++++++++ .+.. .++++++++++.+.|+++
T Consensus 246 d~~s~sK~~~~G~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 324 (397)
T 2ord_A 246 DVLTTAKGLGGGVPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEE 324 (397)
T ss_dssp SEEEECGGGGTTSCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeeccccCCCcCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998876 5542 235677788888888653
Q ss_pred ---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++++++. ......++++.|+++||++.+++ .+.+|++||+.+|++++++++++|++++++
T Consensus 325 ~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~--~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 325 YDVVADVRGMGLMIGIQFR-EEVSNREVATKCFENKLLVVPAG--NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp CTTEEEEEEETTEEEEEEC-TTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEEEeEEEEEEEC-ChHHHHHHHHHHHHCCCEEccCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 3566677663 22246789999999999999864 579999999999999999999999988754
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=1.4e-28 Score=225.42 Aligned_cols=239 Identities=28% Similarity=0.462 Sum_probs=186.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc-c-cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM-L-SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
+||++.|++.++.++++..||.++.+|||.+..+....+.... . .......+..+|. .+ .+
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~--------~d---------~~ 176 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY--------ND---------VE 176 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT--------TC---------HH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC--------Cc---------HH
Confidence 4799999999887767788999999999988765554432210 0 0011111112221 11 67
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
+|++.++ +++++|+++|+++..|.+.++++++++|.++|++||++||+||+|+||++.|. .+..+..++.||++++
T Consensus 177 ~l~~~i~---~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~d~~s~ 252 (395)
T 1vef_A 177 ALKRAVD---EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK-RFAFEHFGIVPDILTL 252 (395)
T ss_dssp HHHHHCC---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSEEEE
T ss_pred HHHHHhc---cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc-hhHhhhcCCCCCEEEE
Confidence 7887775 46899999999999999899999999999999999999999999999998887 5566777888999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-------- 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-------- 201 (284)
+|++++|+++|++++++++++.+.. .++++++++++.+.|+++
T Consensus 253 sK~~~~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 332 (395)
T 1vef_A 253 AKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPKIREV 332 (395)
T ss_dssp CGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred cccccCCCceEEEEehHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCceEEE
Confidence 9999999999999999998876643 225667788888888764
Q ss_pred --cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+. . ....+++.|. ++||++.+++ .+.+|+.+++.+|++++++++++|.+++
T Consensus 333 ~~~g~~~~~~~~-~--~~~~l~~~l~~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 333 RGMGLMVGLELK-E--KAAPYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEETTEEEEEES-S--CSHHHHHHHHHHHCEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEc-C--hHHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 3456666663 2 2567889999 9999999853 5799999999999999999999998875
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.96 E-value=3e-28 Score=221.33 Aligned_cols=238 Identities=25% Similarity=0.405 Sum_probs=184.4
Q ss_pred CcHHHHHHHHHHHcc-----CCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYT-----GRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~-----~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
+||++.|++++|.++ ||.+|++.+.+|||....+.......... . ......+..+|.+ +
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d------ 161 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLN--------D------ 161 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTT--------C------
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCc--------h------
Confidence 479999999887665 66899999999999887665443221100 0 0111112222321 1
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
.++|++.++ +++++|+++|.++..|.+.++++++++|.++|++||+++|+||+|++||++|. .+..+.++..|
T Consensus 162 ---~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~ 234 (375)
T 2eh6_A 162 ---IDSVYKLLD---EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE-FYAYQHFNLKP 234 (375)
T ss_dssp ---HHHHHTTCC---TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGTCCC
T ss_pred ---HHHHHHHhc---CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-chhhhhcCCCC
Confidence 567776664 46899999999999999989999999999999999999999999999998886 45667778889
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
|++++||.+++|+++|++++++++++.+.. .++++++++++.+.|+++
T Consensus 235 d~~s~SK~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 314 (375)
T 2eh6_A 235 DVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGKGKV 314 (375)
T ss_dssp SEEEECGGGGTTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred CEEEEcccccCCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999998876643 225566777888888764
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++++. . ...++++.|+++||++.+++ .+.+|+.+++.+|++++++++++|+++
T Consensus 315 ~~~g~~~~~~~~-~--~~~~~~~~l~~~gi~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 315 KGRGLMLGLELE-R--ECKDYVLKALEKGLLINCTA--GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp EEETTEEEEECS-S--CCHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEEc-C--cHHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 4667777763 2 25678889999999999753 579999999999999999999999875
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=8.2e-25 Score=202.41 Aligned_cols=239 Identities=13% Similarity=0.105 Sum_probs=170.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.|++.++. ...+|+++..+|||....+...... +..+|... ....+..| +++|
T Consensus 129 ~ea~~~a~~~~~~--~gd~Vi~~~~~y~~~~~~~~~~g~~-----------~~~~~~~~-~~~~~~~d--------~~~l 186 (421)
T 3l8a_A 129 VPAISIALQAFSE--KGDAVLINSPVYYPFARTIRLNDHR-----------LVENSLQI-INGRFEID--------FEQL 186 (421)
T ss_dssp HHHHHHHHHHHSC--TEEEEEEEESCCHHHHHHHHHTTEE-----------EEEEECEE-ETTEEECC--------HHHH
T ss_pred HHHHHHHHHHhcC--CCCEEEECCCCcHHHHHHHHHCCCE-----------EEeccccc-cCCCeeeC--------HHHH
Confidence 4789999998743 3367999999999977665543211 11122210 00001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-----cccCCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-----QTQGAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-----~~~g~~pDi 155 (284)
++.+.. +++++|+++++++.+| .+++++++++|+++|++||++||+||+|++|+++|.....+ +..+..+++
T Consensus 187 e~~i~~--~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 263 (421)
T 3l8a_A 187 EKDIID--NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIIL 263 (421)
T ss_dssp HHHHHH--TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEE
T ss_pred HHHhhc--cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEE
Confidence 888863 4689999999999988 67788899999999999999999999999999888522222 123455778
Q ss_pred EEeccccc-CCcceeEEEec-HHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 156 ITVGKPMG-NGMPIGAVITS-RKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
.+++|+++ +|+|+|+++++ +++++.+.. .++++++.+++.+.|++.
T Consensus 264 ~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (421)
T 3l8a_A 264 SSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAK 343 (421)
T ss_dssp ECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999998 78999999998 888776543 224556677777777663
Q ss_pred --------cCceeE-EEEecccHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWC-LILLSITYYLYRYTRRMKE-AKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --------~G~~~~-i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|.++. +++........++++.|++ +||++.++.. ..+++||.++ .++++|++++++|+++++
T Consensus 344 ~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 344 TKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp CSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred CCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 344444 7764212245678888975 5999998643 3479999987 599999999999998764
No 41
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.92 E-value=3e-23 Score=192.40 Aligned_cols=230 Identities=14% Similarity=0.121 Sum_probs=169.1
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
+|++.|++.. +++...|.+...+|+.+.......+.. +..+| +++ .++|+
T Consensus 135 ~a~~~al~~l---~~~gd~vl~~~~~h~~~~~~~~~~g~~----------~~~~~--------~~d---------~~~le 184 (427)
T 2w8t_A 135 MANLGIISTL---AGKGEYVILDADSHASIYDGCQQGNAE----------IVRFR--------HNS---------VEDLD 184 (427)
T ss_dssp HHHHHHHHHH---SCTTCEEEEETTCCHHHHHHHHHSCSE----------EEEEC--------TTC---------HHHHH
T ss_pred HHHHHHHHHh---cCCCCEEEECCcccHHHHHHHHHcCCe----------eEEeC--------CCC---------HHHHH
Confidence 5666666653 455555556677777655443332211 11122 122 68889
Q ss_pred HHHHhcCC-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC--ccccCccccccccCCCCc----
Q psy11784 82 NIMEAHRD-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM--GRSGSHFWAFQTQGAVPD---- 154 (284)
Q Consensus 82 ~~i~~~~~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~--gr~G~~~~a~~~~g~~pD---- 154 (284)
+.++...+ ++++|++||++++.|.+.+ +++|+++|++||++||+||+|+++ +++|. +..+++++.||
T Consensus 185 ~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~--~~~~~~~~~~~~di~ 258 (427)
T 2w8t_A 185 KRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR--GVYEAQGLEGQIDFV 258 (427)
T ss_dssp HHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC--CHHHHTTCTTCCSEE
T ss_pred HHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCC--chHhhcCCCcCCcEE
Confidence 98885444 6899999999999998887 999999999999999999999963 45554 34566787777
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
+.+++|+++ ++.|++++++++++.+.. .++++++++++++.|+++
T Consensus 259 ~~s~sK~~g--~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g 336 (427)
T 2w8t_A 259 VGTFSKSVG--TVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG 336 (427)
T ss_dssp EEESSSTTC--SCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred Eecchhhhc--cCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 678999996 566999999888775533 236677788888888764
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++.+ ++.....++++.|+++||++.++... .+++|++++..+|++++++++++|+++++++
T Consensus 337 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 337 FRLGTETCDSAIVAVML-EDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp CEESCSSCCSSEEEEEE-SSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCEEEEEE-CCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 245566666 34456778999999999999886432 3689999999999999999999999999887
Q ss_pred hh
Q psy11784 269 QM 270 (284)
Q Consensus 269 ~~ 270 (284)
.+
T Consensus 416 ~~ 417 (427)
T 2w8t_A 416 GV 417 (427)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 42
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=1.8e-22 Score=185.85 Aligned_cols=180 Identities=12% Similarity=0.125 Sum_probs=143.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc--CccccCccccccccCC--C
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG--MGRSGSHFWAFQTQGA--V 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr~G~~~~a~~~~g~--~ 152 (284)
.++|++.++.. +.++|+++++++..|.+.+ +++|+++|++||++||+||+|++ +|++|. .+. ..+++ .
T Consensus 175 ~~~le~~l~~~--~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~-~~~-~~~~~~~~ 246 (409)
T 3kki_A 175 CDHLRMLIQRH--GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGA-GLL-AELGLTRE 246 (409)
T ss_dssp HHHHHHHHHHH--CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CHH-HHHTCGGG
T ss_pred HHHHHHHHHhc--CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-cch-hhcCCCCC
Confidence 67888888743 2589999999999998877 99999999999999999999997 888886 333 45566 4
Q ss_pred CcE--EEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHH
Q psy11784 153 PDI--ITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 153 pDi--v~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L 198 (284)
+|+ .+++|++++| .|++++++++++.+.. .++++++++++.+.|
T Consensus 247 ~di~~~s~sK~~~~~--gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L 324 (409)
T 3kki_A 247 VHFMTASLAKTFAYR--AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGL 324 (409)
T ss_dssp CSEEEEESSSTTCSS--CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecchhhCCC--ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 677 6789999876 5888888877665432 225667788888888
Q ss_pred Hhc------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 199 GIN------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 199 ~~~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+++ .|.++++.+. ......++++.|+++||++.+... ..+++||.|+..+|++++++++++|+++++.
T Consensus 325 ~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 325 SQLGLTIRSESQIIGLETG-DERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HTTTCCCCCSSSEEEEEEE-SHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCccCCCCCEEEEEeC-CHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 875 4667777773 444567899999999999976432 3479999999999999999999999998875
No 43
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=3.5e-22 Score=182.40 Aligned_cols=184 Identities=16% Similarity=0.203 Sum_probs=145.8
Q ss_pred HHHHHHHHHhcCC---CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccc-ccC-ccccCccccccccCC
Q psy11784 77 AQAARNIMEAHRD---NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQ-CGM-GRSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~---~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tG~-gr~G~~~~a~~~~g~ 151 (284)
.+++++.++.... ++++|+++++++..|.+.+ +++|.++|++||+++|+||+| .|+ ++.|. ...+.+++
T Consensus 159 ~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~ 232 (399)
T 3tqx_A 159 MGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGR--GTPEYCGV 232 (399)
T ss_dssp TTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC--CHHHHHTC
T ss_pred HHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCC--chHHhhCC
Confidence 3566777764332 6999999999999998877 999999999999999999999 465 55554 34556666
Q ss_pred --CCcEE--EecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHH
Q psy11784 152 --VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 --~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l 194 (284)
.+|++ +++|+++ |++.|++++++++++.+.. .++++++.+++
T Consensus 233 ~~~~di~~~s~sK~~~-g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 311 (399)
T 3tqx_A 233 ADRVDILTGTLGKALG-GASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYF 311 (399)
T ss_dssp TTCCSEEEEESSSSSC-SSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEecchHhcc-cCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 78988 8999999 6788999999998876643 12556667777
Q ss_pred HHHHHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 195 VRPLGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 195 ~~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
.+.|+++ .|.++++.+ +......++++.|.++||++.+... ..+++|++++..+|++++++++++|.
T Consensus 312 ~~~L~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 390 (399)
T 3tqx_A 312 RAGMEKLGFQLVPGNHPIIPVML-GDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFG 390 (399)
T ss_dssp HHHHHHHTCCBCCCSSSEEEEEE-ECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHH
Confidence 7777764 566777777 3445678899999999999987532 23689999999999999999999999
Q ss_pred HHHHHH
Q psy11784 263 RIFTSL 268 (284)
Q Consensus 263 ~~l~~~ 268 (284)
++++++
T Consensus 391 ~~~~~~ 396 (399)
T 3tqx_A 391 QVGKKL 396 (399)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998765
No 44
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.89 E-value=2.5e-21 Score=179.57 Aligned_cols=245 Identities=13% Similarity=0.111 Sum_probs=163.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++..+. ....|++.+.+|++....+....+.. +..+|.... ..+.-| +++|
T Consensus 121 ~~a~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~----------~~~~~~~~~--~~~~~d--------~~~l 178 (435)
T 3piu_A 121 TSANETFIFCLAD--PGEAVLIPTPYYPGFDRDLKWRTGVE----------IVPIHCTSS--NGFQIT--------ETAL 178 (435)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHTTTTTCCE----------EEEEECCGG--GTSCCC--------HHHH
T ss_pred HHHHHHHHHHhcC--CCCeEEECCCccccHHHHHHHhcCCE----------EEEeeCCCc--cCCcCC--------HHHH
Confidence 3677777776643 23568888888877655433222211 112232211 111112 6777
Q ss_pred HHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC----CC-
Q psy11784 81 RNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG----AV- 152 (284)
Q Consensus 81 ~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g----~~- 152 (284)
++.++. ...++++|++++.++..|. +++.+.+++|.++|++||++||+||+|+++++.|..+......+ +.
T Consensus 179 ~~~l~~~~~~~~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~ 257 (435)
T 3piu_A 179 EEAYQEAEKRNLRVKGVLVTNPSNPLGT-TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDE 257 (435)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-----
T ss_pred HHHHHHHHhcCCCeEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccccccc
Confidence 777763 2335888888887877776 56788899999999999999999999998777665222222211 11
Q ss_pred ----Cc----EEEeccccc-CCcceeEEEe-cHHHHHhchh--------------------------------hhhHHHH
Q psy11784 153 ----PD----IITVGKPMG-NGMPIGAVIT-SRKIAESLNC--------------------------------LDDNRPS 190 (284)
Q Consensus 153 ----pD----iv~~sK~l~-~G~p~gav~~-~~~i~~~~~~--------------------------------l~~~~~~ 190 (284)
+| +.++||+++ +|+++|++++ ++++.+.+.. .++++++
T Consensus 258 ~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (435)
T 3piu_A 258 NSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQR 337 (435)
T ss_dssp --CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 44 568999998 7899999999 5666665433 1134445
Q ss_pred HHHHHHHHHhc--------cCceeEEEEecc-----cHHHHHHHHHHHHC-CcEEeecCC----CCCEEEEEcCCCCCHH
Q psy11784 191 GKYLVRPLGIN--------LHIFWCLILLSI-----TYYLYRYTRRMKEA-KIIVANEGE----YGNVLLFLPAMCLTTE 252 (284)
Q Consensus 191 ~~~l~~~L~~~--------~G~~~~i~~~~~-----~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~lr~~p~l~~t~~ 252 (284)
.+++.+.|++. .|+++++.+... .....++++.|+++ ||++.++.. ..+++||.++.. |++
T Consensus 338 ~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e 416 (435)
T 3piu_A 338 QKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PER 416 (435)
T ss_dssp HHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHH
T ss_pred HHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHH
Confidence 55666666654 347778877411 11456788889877 999998643 357999998766 999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy11784 253 NVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~ 269 (284)
++++++++|.++++++.
T Consensus 417 ~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 417 TLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 45
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.88 E-value=5.1e-21 Score=174.22 Aligned_cols=241 Identities=11% Similarity=0.058 Sum_probs=166.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.. .....+|++...+||+....+...... +..+|... ....+..+ .++|
T Consensus 95 ~~a~~~~~~~l--~~~gd~vl~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~-~~~~~~~d--------~~~l 152 (391)
T 3dzz_A 95 VPAISAMVRQF--TSPGDQILVQEPVYNMFYSVIEGNGRR-----------VISSDLIY-ENSKYSVN--------WADL 152 (391)
T ss_dssp HHHHHHHHHHH--SCTTCEEEECSSCCHHHHHHHHHTTCE-----------EEECCCEE-ETTEEECC--------HHHH
T ss_pred HHHHHHHHHHh--CCCCCeEEECCCCcHHHHHHHHHcCCE-----------EEEeeeee-cCCceeec--------HHHH
Confidence 36777777765 223467888888898866554432211 11122210 00111111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-CCc----E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-VPD----I 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~pD----i 155 (284)
++.++. .++.+|+++..++..|.+ +|++.+++|.++|++||+++|+||+|++|.+.|.........+. .|| +
T Consensus 153 ~~~l~~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~ 229 (391)
T 3dzz_A 153 EEKLAT--PSVRMMVFCNPHNPIGYA-WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSL 229 (391)
T ss_dssp HHHHTS--TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEE
T ss_pred HHHHhc--cCceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEE
Confidence 888852 457888887778888864 57788999999999999999999999998887753334444432 378 5
Q ss_pred EEeccccc-CCcceeEEEec-HHHHHhchh--------------------------------hhhHHHHHHHHHHHHHh-
Q psy11784 156 ITVGKPMG-NGMPIGAVITS-RKIAESLNC--------------------------------LDDNRPSGKYLVRPLGI- 200 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~- 200 (284)
.+++|+++ +|+++|+++++ +++++.+.. .++++++.+++.+.|++
T Consensus 230 ~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (391)
T 3dzz_A 230 ISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE 309 (391)
T ss_dssp ECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 57899998 78999999997 888776543 22455667777788876
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ .+++.++.+........++++.|+ ++||++.++..+ .+++|++++ ++++++++++++|.++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 310 VPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp CTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 3 344445665321235778999996 899999986432 378999876 699999999999999987
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
++
T Consensus 388 ~~ 389 (391)
T 3dzz_A 388 NL 389 (391)
T ss_dssp TC
T ss_pred Hh
Confidence 64
No 46
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.88 E-value=2e-20 Score=173.04 Aligned_cols=243 Identities=14% Similarity=0.108 Sum_probs=163.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++.... ...+|+....+||+....+....+.. +..+|.... ..+.-+ ++++
T Consensus 118 ~~ai~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~~g~~----------~~~v~~~~~--~~~~~d--------~~~l 175 (428)
T 1iay_A 118 TGANETIIFCLAD--PGDAFLVPSPYYPAFNRDLRWRTGVQ----------LIPIHCESS--NNFKIT--------SKAV 175 (428)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEESSCCTTHHHHTTTTTCCE----------EEEECCCTT--TTTCCC--------HHHH
T ss_pred HHHHHHHHHHhCC--CCCeEEEccCCCcchHHHHHHhcCCE----------EEEeecCCc--cCCcCC--------HHHH
Confidence 3677777776642 23579999999998765332222211 112332110 011112 5677
Q ss_pred HHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-------C
Q psy11784 81 RNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-------G 150 (284)
Q Consensus 81 ~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-------g 150 (284)
++.++. ...++++|++...++..|.. .|++++++|.++|++||+++|+||+|+++++.|..+.....+ +
T Consensus 176 ~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (428)
T 1iay_A 176 KEAYENAQKSNIKVKGLILTNPSNPLGTT-LDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTY 254 (428)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTT
T ss_pred HHHHHHHHhcCCceEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccccc
Confidence 777763 23457877776656667764 689999999999999999999999999876655311121111 2
Q ss_pred CCCc----EEEeccccc-CCcceeEEEe-cHHHHHhchh--------------------------------hhhHHHHHH
Q psy11784 151 AVPD----IITVGKPMG-NGMPIGAVIT-SRKIAESLNC--------------------------------LDDNRPSGK 192 (284)
Q Consensus 151 ~~pD----iv~~sK~l~-~G~p~gav~~-~~~i~~~~~~--------------------------------l~~~~~~~~ 192 (284)
+.+| +.++||+++ .|+++|++++ ++++++.+.. .++++++.+
T Consensus 255 ~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 334 (428)
T 1iay_A 255 CNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHK 334 (428)
T ss_dssp SCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 3477 568999998 7899999999 6777776543 113445667
Q ss_pred HHHHHHHhc--------cCceeEEEEeccc-----HHHHHHHHHHHHC-CcEEeecCCC----CCEEEEEcCCCCCHHHH
Q psy11784 193 YLVRPLGIN--------LHIFWCLILLSIT-----YYLYRYTRRMKEA-KIIVANEGEY----GNVLLFLPAMCLTTENV 254 (284)
Q Consensus 193 ~l~~~L~~~--------~G~~~~i~~~~~~-----~~~~~~~~~l~~~-Gv~~~~~~~~----~~~lr~~p~l~~t~~~i 254 (284)
++.+.|+++ .|+++++++.... .....+++.|+++ ||++.++..+ .+++|++++ .++++++
T Consensus 335 ~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i 413 (428)
T 1iay_A 335 HFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTV 413 (428)
T ss_dssp HHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHH
T ss_pred HHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHH
Confidence 777777764 4556777773210 2456789999986 9999987543 468999988 6899999
Q ss_pred HHHHHHHHHHHHH
Q psy11784 255 LFIVSTLNRIFTS 267 (284)
Q Consensus 255 d~~~~~l~~~l~~ 267 (284)
++++++|++++++
T Consensus 414 ~~~~~~l~~~l~~ 426 (428)
T 1iay_A 414 DIALARIRRFVGV 426 (428)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
No 47
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.87 E-value=3.2e-21 Score=175.02 Aligned_cols=238 Identities=11% Similarity=0.163 Sum_probs=165.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.. .....+|++...+||+....+..... . +..+|.+.. ..+.-| .+++
T Consensus 91 ~~a~~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g~-~----------~~~v~~~~~--~~~~~d--------~~~l 147 (375)
T 3op7_A 91 TGANLLVLYSL--IEPGDHVISLYPTYQQLYDIPKSLGA-E----------VDLWQIEEE--NGWLPD--------LEKL 147 (375)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESSCTHHHHHHHHTTC-E----------EEEEEEEGG--GTTEEC--------HHHH
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCchhHHHHHHHcCC-E----------EEEEecccc--CCCCCC--------HHHH
Confidence 36777777755 22346789999999986554432211 1 111221110 001111 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecc
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK 160 (284)
++.+. +++++|++++.++..|. ..|++++++|.++|++||+++|+||+|+++++.+. ....+.++..+++.++||
T Consensus 148 ~~~l~---~~~~~v~~~~~~nptG~-~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~i~~~s~sK 222 (375)
T 3op7_A 148 RQLIR---PTTKMICINNANNPTGA-VMDRTYLEELVEIASEVGAYILSDEVYRSFSELDV-PSIIEVYDKGIAVNSLSK 222 (375)
T ss_dssp HHHCC---TTCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCC-CCHHHHCTTEEEEEESSS
T ss_pred HHhhc---cCCeEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccccccccCC-CchhhhcCCEEEEeEChh
Confidence 77764 46888999998888886 45889999999999999999999999998876543 333455666788889999
Q ss_pred ccc-CCcceeEEEecHHHHHhchh---------------------------hh----hHHHHHHHHHHHHHhc-------
Q psy11784 161 PMG-NGMPIGAVITSRKIAESLNC---------------------------LD----DNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 161 ~l~-~G~p~gav~~~~~i~~~~~~---------------------------l~----~~~~~~~~l~~~L~~~------- 201 (284)
+++ +|+++|++++++++++.+.. ++ +++++.+++.+.|++.
T Consensus 223 ~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 302 (375)
T 3op7_A 223 TYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIR 302 (375)
T ss_dssp SSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECC
T ss_pred hcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec
Confidence 998 78999999999999887654 11 2345566666666653
Q ss_pred --cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|.+..+.+ +......++++.++ ++||++.++..+ .+++|+. +..+++++++++++|.++++++.
T Consensus 303 ~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~--~~~~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 303 PAVVSTSFVKI-AVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLG--FACEQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp CSSSSCEEEEE-CCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEC--CCSCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCeEEEeEEc-CCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHHh
Confidence 334445555 33334667888874 789999987543 4789995 55677999999999999987654
No 48
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.87 E-value=9.8e-21 Score=173.33 Aligned_cols=184 Identities=18% Similarity=0.232 Sum_probs=142.6
Q ss_pred HHHHHHHHHhcCC---CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC
Q psy11784 77 AQAARNIMEAHRD---NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~---~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~ 151 (284)
.+++++.++...+ ++++|++++.++..|.+.+ +++|.++|++||+++|+||+|. |+ +++|. .+ ....++
T Consensus 161 ~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~-~~-~~~~~~ 234 (401)
T 1fc4_A 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGR-GS-HEYCDV 234 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSC-CH-HHHTTC
T ss_pred HHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cc-HHHcCC
Confidence 5677777763222 5889999999999998876 9999999999999999999994 88 45675 32 334555
Q ss_pred CC--cEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHH
Q psy11784 152 VP--DII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~p--Div--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~ 195 (284)
.+ |++ +++|+++++. .|++++++++++.+.. .++++++++++.
T Consensus 235 ~~~~di~~~s~sK~~~~~~-gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 313 (401)
T 1fc4_A 235 MGRVDIITGTLGKALGGAS-GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFR 313 (401)
T ss_dssp TTCCSEEEEESSSTTCSSS-CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CcCCcEEEecchhhccCCC-CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 44 777 8899997654 5999999988776532 225566777888
Q ss_pred HHHHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 196 ~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+.|+++ .|.++++.+ +......++.+.|.++||++.++... .+.+|+.++..+|++++++++++|++
T Consensus 314 ~~L~~~g~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (401)
T 1fc4_A 314 EQMSAAGFTLAGADHAIIPVML-GDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTR 392 (401)
T ss_dssp HHHHHTTCCBCCSSSSEEEEEE-ECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCcccCCCCCEEEEEc-CChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 888764 466777777 33345778999999999999876432 35899999999999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 393 ~~~~~ 397 (401)
T 1fc4_A 393 IGKQL 397 (401)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98765
No 49
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.87 E-value=1.5e-20 Score=175.66 Aligned_cols=240 Identities=13% Similarity=0.137 Sum_probs=166.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... .....|++.+.+|||....+.... .. +..+|... . +.+ .++|
T Consensus 150 ~~al~~~~~~l~--~~Gd~Vlv~~p~y~~~~~~~~~~g-~~----------~~~v~~~~--~---g~d--------~~~L 203 (448)
T 3aow_A 150 QQALDLIGRVFL--NPGDIVVVEAPTYLAALQAFNFYE-PQ----------YIQIPLDD--E---GMK--------VEIL 203 (448)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCHHHHHHHHTTC-CE----------EEEEEEET--T---EEC--------HHHH
T ss_pred HHHHHHHHHHHc--CCCCEEEEeCCChHHHHHHHHHcC-CE----------EEEeccCC--C---CCC--------HHHH
Confidence 367777777652 233679999999999766543321 11 11122211 0 011 5777
Q ss_pred HHHHHh---cCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---cccccccCCCC
Q psy11784 81 RNIMEA---HRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---FWAFQTQGAVP 153 (284)
Q Consensus 81 ~~~i~~---~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~~a~~~~g~~p 153 (284)
++.++. ...++++|++.|. ++..|. .++.+++++|.++|++||+++|+||+|+++.+.|.. +...+..+...
T Consensus 204 ~~~l~~~~~~~~~~k~v~~~~~~~NPtG~-~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi 282 (448)
T 3aow_A 204 EEKLKELKSQGKKVKVVYTVPTFQNPAGV-TMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVI 282 (448)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEE
T ss_pred HHHHhhhhccCCCCeEEEECCCCCCCcCC-CCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEE
Confidence 777751 2235888877775 444665 478999999999999999999999999988665541 22333334456
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh--------------------h-------------hhHHHHHHHHHHHHHh
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------L-------------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l-------------~~~~~~~~~l~~~L~~ 200 (284)
++.+|||.++.|+++|++++++++++.+.. + +.++++.+++.+.|++
T Consensus 283 ~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 362 (448)
T 3aow_A 283 YLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEE 362 (448)
T ss_dssp EEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778999999989999999999999887654 1 1233556677777764
Q ss_pred c-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+ +......++++.|.++||++.|+..+ .+++|++++. .++++|++++++|.+
T Consensus 363 ~~~~g~~~~~p~~g~~~~v~~-~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~ 440 (448)
T 3aow_A 363 FMPEGVKWTKPEGGMFIWVTL-PDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAE 440 (448)
T ss_dssp HCCTTCEECCCSBSSEEEEEC-STTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHH
T ss_pred hCCCCeEEeCCCccEEEEEEc-CCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHH
Confidence 1 356667776 33234678999999999999986432 4789999876 489999999999999
Q ss_pred HHHHHh
Q psy11784 264 IFTSLQ 269 (284)
Q Consensus 264 ~l~~~~ 269 (284)
++++..
T Consensus 441 ~l~~~~ 446 (448)
T 3aow_A 441 TIKEEL 446 (448)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997764
No 50
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.87 E-value=4.6e-21 Score=177.31 Aligned_cols=239 Identities=13% Similarity=0.120 Sum_probs=163.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCc------CCCCCCCchHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTY------RGEFSADDPQAAQ 74 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 74 (284)
+||++.+++.... ...+|++...+|||....+.... .. +..+|....- ...+..|
T Consensus 111 ~~a~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g-~~----------~~~~~~~~~~~~~~~~~~~~~~d------ 171 (429)
T 1yiz_A 111 YEALYATIQGHVD--EGDEVIIIEPFFDCYEPMVKAAG-GI----------PRFIPLKPNKTGGTISSADWVLD------ 171 (429)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTT-CE----------EEEEECBCCCSSSSEEGGGCBCC------
T ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcC-CE----------EEEEeCCcccccccccccCcccC------
Confidence 4688888887632 23679999999999765543221 11 1112221100 0011112
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc----ccC
Q psy11784 75 KYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ----TQG 150 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~----~~g 150 (284)
+++|++.++ +++++|++++.++..|.+ +|++++++|.++|++||+++|+||+|++|++.|....... ..+
T Consensus 172 --~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 245 (429)
T 1yiz_A 172 --NNELEALFN---EKTKMIIINTPHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWE 245 (429)
T ss_dssp --HHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGG
T ss_pred --HHHHHHHhc---cCceEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcC
Confidence 677777664 468899999888888865 5789999999999999999999999999877664222222 234
Q ss_pred CCCcEEEeccccc-CCcceeEEEecHHHHHhchh--------------------hhh------------------HHHHH
Q psy11784 151 AVPDIITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------LDD------------------NRPSG 191 (284)
Q Consensus 151 ~~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l~~------------------~~~~~ 191 (284)
..+++.+++|.++ +|+|+|++++++++++.+.. ++. ++++.
T Consensus 246 ~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 246 RTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR 325 (429)
T ss_dssp GEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred ceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHH
Confidence 4556778999998 68999999999998876643 212 23345
Q ss_pred HHHHHHHHhc--------cCceeEEEEeccc-----------HHHHHHHHHHH-HCCcEEeecCCC---------CCEEE
Q psy11784 192 KYLVRPLGIN--------LHIFWCLILLSIT-----------YYLYRYTRRMK-EAKIIVANEGEY---------GNVLL 242 (284)
Q Consensus 192 ~~l~~~L~~~--------~G~~~~i~~~~~~-----------~~~~~~~~~l~-~~Gv~~~~~~~~---------~~~lr 242 (284)
+++.+.|++. .|+++++++.... ....++++.|. ++||++.++..+ .+++|
T Consensus 326 ~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iR 405 (429)
T 1yiz_A 326 DYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVR 405 (429)
T ss_dssp HHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEE
T ss_pred HHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEE
Confidence 5566666543 4667777774210 24567888887 789999876432 57999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++++ .++++|++++++|.++++
T Consensus 406 is~~--~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 406 YCFF--KKDENLQKAAEILRKWKG 427 (429)
T ss_dssp EECC--SCHHHHHHHHHHHHHHSC
T ss_pred EEec--CCHHHHHHHHHHHHHhcc
Confidence 9987 499999999999988753
No 51
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.87 E-value=1.4e-20 Score=172.40 Aligned_cols=186 Identities=13% Similarity=0.154 Sum_probs=137.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC-----C
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG-----A 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g-----~ 151 (284)
++++++.++. ++.+|++...++..|. .+|.+.+++|.++|++||+++|+||+|++|++.|+........+ .
T Consensus 169 ~~~l~~~l~~---~~~~v~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~ 244 (407)
T 3nra_A 169 LTGLEEAFKA---GARVFLFSNPNNPAGV-VYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAEN 244 (407)
T ss_dssp HHHHHHHHHT---TCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGG
T ss_pred HHHHHHHHhh---CCcEEEEcCCCCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCc
Confidence 6788888873 4555655555777776 55889999999999999999999999998877765233333332 2
Q ss_pred CCcEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHH
Q psy11784 152 VPDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 152 ~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~ 199 (284)
..++.++||.++ .|+++|++++++++++.+.. .++.+++.+++.+.|+
T Consensus 245 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 324 (407)
T 3nra_A 245 VVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLR 324 (407)
T ss_dssp EEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh
Confidence 244567899998 78999999999999887654 2245566677777777
Q ss_pred hc---------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 200 IN---------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 200 ~~---------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++ .|.++++.+........++++.|++ +||++.++.. ..+++|++++. |+++|++++++|.+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~ 402 (407)
T 3nra_A 325 GCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLV 402 (407)
T ss_dssp TSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred cCCCceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 64 2455555553213456788898875 5999998653 34789998774 9999999999999998
Q ss_pred HHH
Q psy11784 266 TSL 268 (284)
Q Consensus 266 ~~~ 268 (284)
+++
T Consensus 403 ~~~ 405 (407)
T 3nra_A 403 ERY 405 (407)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 52
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=2.7e-20 Score=170.66 Aligned_cols=240 Identities=13% Similarity=0.139 Sum_probs=165.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.... ...+|++...+||+....+... +.. +..+|.... ..+ .++|
T Consensus 108 t~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~-g~~----------~~~v~~~~~-----~~d--------~~~l 161 (407)
T 2zc0_A 108 TGALDLLGRVLID--PGDVVITENPSYINTLLAFEQL-GAK----------IEGVPVDND-----GMR--------VDLL 161 (407)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTT-TCE----------EEEEEEETT-----EEC--------HHHH
T ss_pred HHHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHc-CCE----------EEEcccCCC-----CCC--------HHHH
Confidence 4688888887732 2367999999999976543321 111 112222110 011 6777
Q ss_pred HHHHHh---cCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc---CCCC
Q psy11784 81 RNIMEA---HRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ---GAVP 153 (284)
Q Consensus 81 ~~~i~~---~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~---g~~p 153 (284)
++.++. ...++++|+ ++..++..|. ..|.+++++|.++|++||+++|+||+|+++.+.|........+ +...
T Consensus 162 ~~~l~~~~~~~~~~~~v~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 240 (407)
T 2zc0_A 162 EEKIKELKAKGQKVKLIYTIPTGQNPMGV-TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVI 240 (407)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEE
T ss_pred HHHHHhhhcccCCceEEEECCCCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEE
Confidence 777762 223577875 4556677786 4578999999999999999999999999886666422223223 2234
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh--------------------h-------h-------hHHHHHHHHHHHHH
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------L-------D-------DNRPSGKYLVRPLG 199 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l-------~-------~~~~~~~~l~~~L~ 199 (284)
++.++||.++.|+++|++++++++++.+.. + + +++++.+++.+.|+
T Consensus 241 ~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 320 (407)
T 2zc0_A 241 VAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALE 320 (407)
T ss_dssp EEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566899999988999999999998876643 1 1 22345667777776
Q ss_pred hc----------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC------CCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 200 IN----------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE------YGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 200 ~~----------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+. .|+++++.+ +......++++.|.++ ||++.++.. ..+++|++++.. |++++++++++|.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~ 398 (407)
T 2zc0_A 321 NHLPNAEFTKPIAGMFVMFFL-PEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLA 398 (407)
T ss_dssp HHCTTSCBCCCSBSSEEEEEC-STTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHH
T ss_pred HhCCCCEEecCCCcEEEEEEc-CCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHH
Confidence 52 355666766 3323467899999988 999987643 247899998877 8999999999999
Q ss_pred HHHHHHh
Q psy11784 263 RIFTSLQ 269 (284)
Q Consensus 263 ~~l~~~~ 269 (284)
++++++.
T Consensus 399 ~~l~~~~ 405 (407)
T 2zc0_A 399 KLYKEKF 405 (407)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988763
No 53
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.86 E-value=3.6e-20 Score=168.63 Aligned_cols=225 Identities=15% Similarity=0.173 Sum_probs=160.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++.. .++...+.++..+|+.+..+....+.. +..+|. .+ .+++
T Consensus 109 t~a~~~~~~~~---~~~gd~v~~~~~~~~~~~~~~~~~g~~----------~~~~~~--------~d---------~~~l 158 (384)
T 1bs0_A 109 FAANQAVIAAM---MAKEDRIAADRLSHASLLEAASLSPSQ----------LRRFAH--------ND---------VTHL 158 (384)
T ss_dssp HHHHHHHHHHH---CCTTCEEEEETTCCHHHHHHHHTSSSE----------EEEECT--------TC---------HHHH
T ss_pred HHHHHHHHHHh---CCCCcEEEEcccccHHHHHHHHHcCCC----------EEEeCC--------CC---------HHHH
Confidence 36677777653 455566778888898776555443221 112331 11 5778
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCCCCcEE--
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGAVPDII-- 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~~pDiv-- 156 (284)
++.++...+..++|+++++++..|.+.+ +++|.++|++||+++|+||+|. |+ +++|. .+ .+.++..||++
T Consensus 159 ~~~l~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~-~~~~~~~~di~~~ 232 (384)
T 1bs0_A 159 ARLLASPCPGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGR-GS-CWLQKVKPELLVV 232 (384)
T ss_dssp HHHHHSCCSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTTTSSGGGC-CH-HHHTTCCCSEEEE
T ss_pred HHHHHhcCCCCeEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCcccceecCCCC-ch-HHhcCCCCcEEEe
Confidence 8888754434789999999999998887 9999999999999999999996 53 55665 32 24566779988
Q ss_pred EecccccCCcceeEEEecHHHHHhchh----------------------h------------hhHHHHHHHHHHHHHhc-
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC----------------------L------------DDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------l------------~~~~~~~~~l~~~L~~~- 201 (284)
+++|.++. +.|++++++++++.+.. + ++++++.+++.+.|+++
T Consensus 233 s~sK~~~~--~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 233 TFGKGFGV--SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp ESSSTTSS--CCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred eccchhhc--cCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999973 44999999988765532 1 13344556666666653
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+ +......++.+.|.++||.+.++... .+.+|+.++..+|++++++++++|+++
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 311 FTLADSCSAIQPLIV-GDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CEECSCCSSBCCEEE-ESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred CcccCCCCCEEEEEe-CCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 345566666 33345778999999999999986532 368999999999999999999999764
No 54
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.86 E-value=4.5e-20 Score=168.85 Aligned_cols=182 Identities=15% Similarity=0.222 Sum_probs=141.5
Q ss_pred HHHHHHHHHhcCC-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCC-
Q psy11784 77 AQAARNIMEAHRD-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAV- 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~- 152 (284)
.++|++.++...+ ++++|+++++++..|...+ +++|.++|++||+++|+||+|. | +++++. .+ .+.+++.
T Consensus 159 ~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~-~~~~~~~~ 232 (398)
T 3a2b_A 159 MEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGA-GT-ASHFGLND 232 (398)
T ss_dssp HHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CH-HHHHTCGG
T ss_pred HHHHHHHHHhhccCCceEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCCcccccCCCCC-ch-HhhcCCCc
Confidence 6788888875433 6889999999998898776 9999999999999999999996 4 455554 22 3444554
Q ss_pred -CcEE--EecccccC-CcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHH
Q psy11784 153 -PDII--TVGKPMGN-GMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 153 -pDiv--~~sK~l~~-G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~ 196 (284)
+|++ +++|.++. | |++++++++++.+.. .++++++.+++.+
T Consensus 233 ~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 309 (398)
T 3a2b_A 233 DVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKA 309 (398)
T ss_dssp GCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred CCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 6888 89999984 4 899999988776532 2245666777777
Q ss_pred HHHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 197 PLGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 197 ~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|+++ .|.++++.+ +......++++.|+++||++.++..+ .+.+|+.++..+|++++++++++|.++
T Consensus 310 ~L~~~g~~~~~~~g~~~~~~~-~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 310 QLLDHGFDLGATESPILPIFI-RSNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp HHHHTTCCBCSCCSSEEEEEC-CCHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 77764 466777776 34445778999999999999987543 478999999889999999999999999
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 389 l~~~ 392 (398)
T 3a2b_A 389 FKQA 392 (398)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8765
No 55
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.86 E-value=6.8e-21 Score=173.36 Aligned_cols=238 Identities=16% Similarity=0.133 Sum_probs=160.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCC---CCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP---DTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+++.. .....+|++.+.+||+....+... +.. +..+|.+ +. +..| .
T Consensus 88 ~~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~-g~~----------~~~v~~~~~~~~----~~~d--------~ 142 (381)
T 1v2d_A 88 TEALYVLLQSL--VGPGDEVVVLEPFFDVYLPDAFLA-GAK----------ARLVRLDLTPEG----FRLD--------L 142 (381)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHT-TCE----------EEEEECEEETTE----EECC--------H
T ss_pred HHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHc-CCE----------EEEEeCCCCCcc----CCcC--------H
Confidence 46888888876 334568999999999976543221 111 1123321 11 1111 5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc--ccCccccccccCCCCcE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR--SGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr--~G~~~~a~~~~g~~pDi 155 (284)
++|++.+. +++++|++++.++..|.+ +|.+++++|.++|++||+++|+||+|++|.. .+...... ..+..+++
T Consensus 143 ~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~ 217 (381)
T 1v2d_A 143 SALEKALT---PRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTFTV 217 (381)
T ss_dssp HHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEE
T ss_pred HHHHHhcC---cCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCCCEEEE
Confidence 66666553 458889988888877875 5789999999999999999999999998743 22212222 34666777
Q ss_pred EEeccccc-CCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
.+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 218 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 218 GSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp EEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 89999998 68999999999888776543 114455667777777664
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE------YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+++++.+. .. . +.+.+.++||++.++.. ..+++|++++. +++++++++++|.+++++
T Consensus 298 g~~~~~~~~~~~~~~~~~-~~---~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 298 GLRVYVPEGTYFLMAELP-GW---D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp TCCEECCSBSSEEEEECT-TC---C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred CCEecCCCcceEEEEecC-hH---h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 3556666663 22 1 66677899999988643 24699999876 999999999999999988
Q ss_pred Hhhccchh
Q psy11784 268 LQMDSSPA 275 (284)
Q Consensus 268 ~~~~~~~~ 275 (284)
.++..+.+
T Consensus 371 ~r~~~~~~ 378 (381)
T 1v2d_A 371 PREAEGGA 378 (381)
T ss_dssp --------
T ss_pred cccccCCC
Confidence 76655443
No 56
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.86 E-value=2.7e-20 Score=169.70 Aligned_cols=239 Identities=9% Similarity=0.085 Sum_probs=164.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++.+.+||+....+... +.. +..+|.... ..+..+ .++|
T Consensus 100 ~~a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~-g~~----------~~~v~~~~~--~~~~~d--------~~~l 156 (388)
T 1j32_A 100 KQSIFNLMLAMI--EPGDEVIIPAPFWVSYPEMVKLA-EGT----------PVILPTTVE--TQFKVS--------PEQI 156 (388)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEESSCCTHHHHHHHHT-TCE----------EEEECCCGG--GTTCCC--------HHHH
T ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHc-CCE----------EEEecCCcc--cCCCCC--------HHHH
Confidence 467888887763 23457999999999866543321 111 122332210 011111 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---cccccc--cCCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---FWAFQT--QGAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~~a~~~--~g~~pDi 155 (284)
++.++ +++++|++++.++..|.+ +|++.+++|.++|++||+++|+||+|++|.+.|.. +..... ++..+++
T Consensus 157 ~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (388)
T 1j32_A 157 RQAIT---PKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVC 232 (388)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEE
T ss_pred HHhcC---cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEE
Confidence 77764 358888888878877875 57899999999999999999999999988665531 112211 3455667
Q ss_pred EEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
.+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|+++
T Consensus 233 ~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 312 (388)
T 1j32_A 233 SGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPG 312 (388)
T ss_dssp EESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred eechhccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 78999998 68999999999998776543 124566777788888764
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|++.++.+........++++.|++ +||++.++..+ .+.+|++++ ++++++++++++|.++++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 313 LECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 2333344442102246788889986 79999986533 478999876 69999999999999988764
No 57
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.86 E-value=2.2e-20 Score=169.92 Aligned_cols=237 Identities=11% Similarity=0.073 Sum_probs=158.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+..... . +..+|....-...+.-| ++++
T Consensus 100 ~~a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~g~-~----------~~~~~~~~~~~~~~~~d--------~~~l 158 (391)
T 4dq6_A 100 IPAISLLINELT--KANDKIMIQEPVYSPFNSVVKNNNR-E----------LIISPLQKLENGNYIMD--------YEDI 158 (391)
T ss_dssp HHHHHHHHHHHS--CTTCEEEECSSCCTHHHHHHHHTTC-E----------EEECCCEECTTSCEECC--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCCHHHHHHHHHcCC-e----------EEeeeeeecCCCceEee--------HHHH
Confidence 367777777652 2335788888899887655443221 0 11222210000111112 6778
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-----CCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-----GAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-----g~~pDi 155 (284)
++.++. +.+|+++..++..|. .+|++.+++|.++|++||+++|+||+|++|.+.|......... +....+
T Consensus 159 ~~~l~~----~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 233 (391)
T 4dq6_A 159 ENKIKD----VKLFILCNPHNPVGR-VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITC 233 (391)
T ss_dssp HHHCTT----EEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEE
T ss_pred HHHhhc----CCEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEE
Confidence 877762 777877777777776 4577889999999999999999999999987777522222221 122335
Q ss_pred EEeccccc-CCcceeEEEecH-HHHHhchh--------------------------------hhhHHHHHHHHHHHHHh-
Q psy11784 156 ITVGKPMG-NGMPIGAVITSR-KIAESLNC--------------------------------LDDNRPSGKYLVRPLGI- 200 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~-~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~- 200 (284)
.+++|+++ +|+++|++++++ ++++.+.. .++++++.+++.+.|++
T Consensus 234 ~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 234 MAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINEN 313 (391)
T ss_dssp ECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 57899998 789999999875 77765543 12455666777777765
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .+++.++++........++++.|+++ ||++.++..+ .+++|++++ ++++++++++++|.+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 314 MPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp CTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred CCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 2 23344466632133577899999998 9999986432 378999877 69999999999998876
No 58
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=2.9e-20 Score=172.03 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=163.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+.... .+ +..+|.... ..+ +++|
T Consensus 119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-~~----------~~~v~~~~~-----~~d--------~~~l 172 (425)
T 1vp4_A 119 QQALDLIGKLFL--DDESYCVLDDPAYLGAINAFRQYL-AN----------FVVVPLEDD-----GMD--------LNVL 172 (425)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCHHHHHHHHTTT-CE----------EEEEEEETT-----EEC--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEeCCCcHHHHHHHHHcC-CE----------EEEeccCCC-----CCC--------HHHH
Confidence 356777777542 223679999999999766544321 11 111222110 011 6777
Q ss_pred HHHHHhc-----CCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC---C
Q psy11784 81 RNIMEAH-----RDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG---A 151 (284)
Q Consensus 81 ~~~i~~~-----~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g---~ 151 (284)
++.++.. +.++++|++ ...++..|. .+|.+++++|.++|++||+++|+||+|++|.+.|........++ .
T Consensus 173 ~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 251 (425)
T 1vp4_A 173 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGV-TTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPER 251 (425)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTT
T ss_pred HHHHHhhhhcccCCCceEEEECCCCCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCC
Confidence 7777631 125788754 444555675 46889999999999999999999999998876664222222222 2
Q ss_pred CCcEEEecccccCCcceeEEEecHHHHHhchh--------------------h-------------hhHHHHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------L-------------DDNRPSGKYLVRPL 198 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l-------------~~~~~~~~~l~~~L 198 (284)
...+.++||.+++|+++|++++++++++.+.. + ++++++.+++.+.|
T Consensus 252 ~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L 331 (425)
T 1vp4_A 252 VVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNAL 331 (425)
T ss_dssp EEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccccccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345889999988999999999998876643 1 13445666777777
Q ss_pred Hh-------c------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHH
Q psy11784 199 GI-------N------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 199 ~~-------~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~ 259 (284)
++ + .|.++++.+. ......++++.|.++||++.++..+ .+++|++++.. |+++++++++
T Consensus 332 ~~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~ 409 (425)
T 1vp4_A 332 EEYFSDIPGVKWVKSEGGLFIWLTLP-EGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIK 409 (425)
T ss_dssp HHHSTTSTTCEECCCSBSSEEEEECC-TTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHH
T ss_pred HHhCCCCCceEEecCCccEEEEEEcC-CCCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHH
Confidence 64 2 3455666663 2223457888999899999986432 47899998874 9999999999
Q ss_pred HHHHHHHHHhhc
Q psy11784 260 TLNRIFTSLQMD 271 (284)
Q Consensus 260 ~l~~~l~~~~~~ 271 (284)
+|.++++++.++
T Consensus 410 ~l~~~l~~~~~~ 421 (425)
T 1vp4_A 410 RLREVVLEYGKE 421 (425)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999887544
No 59
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.85 E-value=5.9e-20 Score=166.69 Aligned_cols=237 Identities=12% Similarity=0.119 Sum_probs=160.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++... ....+|++...+||+....+...... +..+|.... ...+.-| +++|
T Consensus 92 ~~a~~~~~~~l~--~~gd~vl~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~~d--------~~~l 149 (383)
T 3kax_A 92 VPALSTSIQAFT--KENESVLVQPPIYPPFFEMVTTNNRQ-----------LCVSPLQKQ-NDTYAID--------FEHL 149 (383)
T ss_dssp HHHHHHHHHHHC--CTTCEEEECSSCCHHHHHHHHHTTCE-----------EEECCCEEE-TTEEECC--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCcHHHHHHHHHcCCE-----------EEeccceec-CCcEEEc--------HHHH
Confidence 367777777652 23467888888888876554332211 111221100 0001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc-----cCCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT-----QGAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~-----~g~~pDi 155 (284)
++.+. +++++|+++..++..|. ..|.+.+++|.++|++||+++|+||+|++|++.|........ .+..+.+
T Consensus 150 ~~~l~---~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 225 (383)
T 3kax_A 150 EKQFQ---QGVKLMLLCSPHNPIGR-VWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITC 225 (383)
T ss_dssp HHHHT---TTCCEEEEESSBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEE
T ss_pred HHHhC---cCCeEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEE
Confidence 88873 45777877777777776 558889999999999999999999999998877742212111 2344556
Q ss_pred EEeccccc-CCcceeEEEe-cHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHh-
Q psy11784 156 ITVGKPMG-NGMPIGAVIT-SRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGI- 200 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~-~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~- 200 (284)
.+++|.++ +|+++|++++ ++++++.+.. .++++++.+++.+.|++
T Consensus 226 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 305 (383)
T 3kax_A 226 MAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDH 305 (383)
T ss_dssp ECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 68899999 7899999998 6788776543 22456667777777776
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .+++.++++........++++.|+ ++||++.++.. ..+++|++++ .+++++++++++|.+++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 306 IPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp CTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred CCCceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 2 233444666321235778999998 68999998643 2478999866 58999999999998875
No 60
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=1.7e-20 Score=170.40 Aligned_cols=233 Identities=14% Similarity=0.087 Sum_probs=159.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++... ....+|++...+||+....+..... . +..+|.++. +..| ++++
T Consensus 97 ~~a~~~~~~~l~--~~gd~vl~~~p~y~~~~~~~~~~g~-~----------~~~~~~~~~----~~~d--------~~~l 151 (376)
T 2dou_A 97 QEGLAHLLLALT--EPEDLLLLPEVAYPSYFGAARVASL-R----------TFLIPLRED----GLAD--------LKAV 151 (376)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEESSCCHHHHHHHHHTTC-E----------EEEECBCTT----SSBC--------GGGS
T ss_pred HHHHHHHHHHhc--CCCCEEEECCCCcHhHHHHHHHcCC-E----------EEEeeCCCC----CCCC--------HHHH
Confidence 367777777652 2236799999999997765443211 1 112232111 1111 4556
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc---cCCCCcEEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT---QGAVPDIIT 157 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~---~g~~pDiv~ 157 (284)
++.+. +++++|+++..++..|.+ +|.+++++|.++|++||+++|+||+|++|.+.|........ .+....+.+
T Consensus 152 ~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 227 (376)
T 2dou_A 152 PEGVW---REAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFS 227 (376)
T ss_dssp CHHHH---HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEE
T ss_pred HHhhc---cCceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEec
Confidence 66664 347788887556667764 58899999999999999999999999988665531111222 233344568
Q ss_pred eccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 158 VGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+||.++ +|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 228 ~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 307 (376)
T 2dou_A 228 LSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGVLSLL 307 (376)
T ss_dssp HHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTTSEEC
T ss_pred chhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999998 78999999999998876644 113456667777777652
Q ss_pred ---cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ---LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ---~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|+++++++. ......++++.|+++||++.++..+ .+++|++++. +++++++++++|.+++
T Consensus 308 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 308 PPRATMYLWGRLP-EGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREAL 375 (376)
T ss_dssp CCCBSSEEEEECC-TTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred CCCeeEEEEEECC-CCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 3556677763 3234567999999999999986432 4799998764 8999999999998764
No 61
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.85 E-value=4.7e-20 Score=168.12 Aligned_cols=239 Identities=15% Similarity=0.170 Sum_probs=159.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++.+.+|||....+.... .. +..+|.... ..+.-| .++|
T Consensus 97 ~~a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~--~~~~~d--------~~~l 153 (389)
T 1gd9_A 97 NQAFLMGLSAFL--KDGEEVLIPTPAFVSYAPAVILAG-GK----------PVEVPTYEE--DEFRLN--------VDEL 153 (389)
T ss_dssp THHHHHHHTTTC--CTTCEEEEEESCCTTHHHHHHHHT-CE----------EEEEECCGG--GTTCCC--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCchhHHHHHHHCC-CE----------EEEeccCCc--cCCCCC--------HHHH
Confidence 466666666541 233568888888888654432211 00 112332210 011111 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CC-CCcE--E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GA-VPDI--I 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~-~pDi--v 156 (284)
++.++ +++++|+++..++..|.+ .|++.+++|.++|++||+++|+||+|+++.+.|........+ +. ..|+ .
T Consensus 154 ~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (389)
T 1gd9_A 154 KKYVT---DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVN 229 (389)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEE
T ss_pred HHhcC---cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEe
Confidence 77765 357888887777777764 678999999999999999999999999887665412222222 21 2354 4
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh--------------------h-------------hhHHHHHHHHHHHHHhc-
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-------------DDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-------------~~~~~~~~~l~~~L~~~- 201 (284)
+++|.++ .|+++|++++++++++.+.. + ++++++.+++.+.|+++
T Consensus 230 s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 309 (389)
T 1gd9_A 230 GFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG 309 (389)
T ss_dssp ESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cChhhcCCcccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7899998 68999999999998876654 1 13445566677777664
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++.+........++++.|+ ++||++.++..+ .+.+|+.++. +++++++++++|.+++++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 310 LPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp CCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred CeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 244455555211224678899998 899999986432 4689998774 9999999999999988653
No 62
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.85 E-value=8e-20 Score=167.14 Aligned_cols=242 Identities=13% Similarity=0.100 Sum_probs=163.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++... ....+|++...+|||....+.... .. +..+|.... .+.+..+ +++|
T Consensus 99 ~~a~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g-~~----------~~~~~~~~~-~g~~~~d--------~~~l 156 (399)
T 1c7n_A 99 VPAVFNAVREFT--KPGDGVIIITPVYYPFFMAIKNQE-RK----------IIECELLEK-DGYYTID--------FQKL 156 (399)
T ss_dssp HHHHHHHHHHHC--CTTCEEEECSSCCTHHHHHHHTTT-CE----------EEECCCEEE-TTEEECC--------HHHH
T ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCcHhHHHHHHHcC-CE----------EEecccccC-CCCEEEc--------HHHH
Confidence 367777777552 224679999999999776554321 11 111222100 0001111 6778
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-----CCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-----GAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-----g~~pDi 155 (284)
++.++ ..++++|++...++..|. .+|++++++|.++|++||+++|+||+|++|++.|........+ +....+
T Consensus 157 ~~~l~--~~~~~~v~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 233 (399)
T 1c7n_A 157 EKLSK--DKNNKALLFCSPHNPVGR-VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITF 233 (399)
T ss_dssp HHHHT--CTTEEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEE
T ss_pred HHHhc--cCCCcEEEEcCCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEE
Confidence 88775 235778887666777776 5688999999999999999999999999987766422222222 223345
Q ss_pred EEeccccc-CCcceeEEEec-HHHHHhchh--------------------------------hhhHHHHHHHHHHHHHh-
Q psy11784 156 ITVGKPMG-NGMPIGAVITS-RKIAESLNC--------------------------------LDDNRPSGKYLVRPLGI- 200 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~- 200 (284)
.++||.++ +|+++|+++++ +++++.+.. .++++++.+++.+.|++
T Consensus 234 ~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 313 (399)
T 1c7n_A 234 TAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN 313 (399)
T ss_dssp ECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 57899998 78999999997 567765533 11355667777777776
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ .|++.++++.........+++.|+ ++||++.++..+ .+.+|++++. +++++++++++|.++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 314 HPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALK 391 (399)
T ss_dssp CTTSBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHH
T ss_pred CCCCeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHH
Confidence 3 234445676311124667899998 689999986532 4789998775 48999999999999998
Q ss_pred HHh
Q psy11784 267 SLQ 269 (284)
Q Consensus 267 ~~~ 269 (284)
++.
T Consensus 392 ~~~ 394 (399)
T 1c7n_A 392 DLK 394 (399)
T ss_dssp HHC
T ss_pred HHH
Confidence 874
No 63
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.85 E-value=1.1e-19 Score=166.47 Aligned_cols=238 Identities=16% Similarity=0.149 Sum_probs=161.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+.... .. +..+|.... + . | .++|
T Consensus 101 ~~al~~~~~~~~--~~gd~Vl~~~p~y~~~~~~~~~~g-~~----------~~~~~~~~~--~--~-d--------~~~l 154 (397)
T 2zyj_A 101 QQALDLVGKVFL--DEGSPVLLEAPSYMGAIQAFRLQG-PR----------FLTVPAGEE--G--P-D--------LDAL 154 (397)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCHHHHHHHHTTC-CE----------EEEEEEETT--E--E-C--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEeCCCcHHHHHHHHHcC-CE----------EEecCcCCC--C--C-C--------HHHH
Confidence 367777777652 223679999999999776544321 11 111222110 0 1 1 6788
Q ss_pred HHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC------CCC
Q psy11784 81 RNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG------AVP 153 (284)
Q Consensus 81 ~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g------~~p 153 (284)
++.++. .++++|+ +...++..|.+ ++.+++++|.++|++||+++|+||+|++|++.|........++ ...
T Consensus 155 ~~~l~~--~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i 231 (397)
T 2zyj_A 155 EEVLKR--ERPRFLYLIPSFQNPTGGL-TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVI 231 (397)
T ss_dssp HHHHHH--CCCSCEEECCBSCTTTCCB-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEE
T ss_pred HHHHhh--cCCeEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEE
Confidence 888873 2456664 45556667764 6889999999999999999999999999877664222222222 223
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh--------------------h-----h-------hHHHHHHHHHHHHHh-
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------L-----D-------DNRPSGKYLVRPLGI- 200 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l-----~-------~~~~~~~~l~~~L~~- 200 (284)
.+.+++|++++|+++|++++++++++.+.. + + +++++.+++.+.|++
T Consensus 232 ~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 232 YLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE 311 (397)
T ss_dssp EEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccccccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355889999988999999999998876643 1 1 223345556666654
Q ss_pred ----c------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 201 ----N------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE------YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 201 ----~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+ .|.++++++ +......++++.|.++||++.++.. ..+++|++++.. |++++++++++|.++
T Consensus 312 ~~~g~~~~~~~~g~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 389 (397)
T 2zyj_A 312 VPKEVRYTRPKGGMFVWMEL-PKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRA 389 (397)
T ss_dssp SCTTSEECCCSBSSEEEEEC-STTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred CCCCeEEccCCccEEEEEEc-CCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHH
Confidence 1 345566666 3223467899999999999998643 247899998875 999999999999999
Q ss_pred HHHHh
Q psy11784 265 FTSLQ 269 (284)
Q Consensus 265 l~~~~ 269 (284)
++++.
T Consensus 390 l~~~~ 394 (397)
T 2zyj_A 390 LKGLL 394 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 64
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.85 E-value=3.8e-20 Score=170.36 Aligned_cols=239 Identities=12% Similarity=0.096 Sum_probs=160.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+..... . +..+|.... .+ ....++++
T Consensus 109 ~~a~~~~~~~~~--~~gd~Vl~~~p~~~~~~~~~~~~g~-~----------~~~~~~~~~------~~----~~~d~~~l 165 (412)
T 2x5d_A 109 KEGLAHLMLATL--DHGDTILVPNPSYPIHIYGAVIAGA-Q----------VRSVPLVPG------ID----FFNELERA 165 (412)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCHHHHHHHHHHTC-E----------EEEEECSTT------SC----HHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCchhHHHHHHHcCC-E----------EEEeecCCc------cC----CCCCHHHH
Confidence 367777777642 2236789999999987665432211 0 112232110 00 00114566
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc----cCCCCcEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT----QGAVPDII 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~----~g~~pDiv 156 (284)
++.+. +++++|++...++..|. .+|.+++++|.++|++||+++|+||+|+++.+.|+....... .+....+.
T Consensus 166 ~~~i~---~~~~~v~l~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 241 (412)
T 2x5d_A 166 IRESI---PKPRMMILGFPSNPTAQ-CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFF 241 (412)
T ss_dssp HHTEE---SCCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEE
T ss_pred HHhcc---cCceEEEECCCCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEe
Confidence 66554 35666766433665676 468899999999999999999999999988765631222222 23334456
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++ +|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 321 (412)
T 2x5d_A 242 TLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWM 321 (412)
T ss_dssp ECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCccccCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 8999998 78999999999998876644 124556677777777754
Q ss_pred -----cCceeEEEEecccH---HHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSITY---YLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -----~G~~~~i~~~~~~~---~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++.+. ... ....+++.|++ +||++.++..+ .+++|++++. +++++++++++|.++++++
T Consensus 322 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 322 VENPKASMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp CCCCSBSSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCeeeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 3667777773 221 46788888875 69999986432 4799999876 8999999999999999876
Q ss_pred h
Q psy11784 269 Q 269 (284)
Q Consensus 269 ~ 269 (284)
.
T Consensus 399 ~ 399 (412)
T 2x5d_A 399 G 399 (412)
T ss_dssp T
T ss_pred C
Confidence 4
No 65
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.85 E-value=6.9e-20 Score=168.79 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=159.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCC-----Cc---CCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPD-----TY---RGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~ 72 (284)
++|++.+++.. .....+|+....+||+....+..... . +..+|... .. ...+.-|
T Consensus 101 ~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~-~----------~~~~~~~~~~~~~G~~~~~~~~~~d---- 163 (422)
T 3fvs_A 101 YGALFTAFQAL--VDEGDEVIIIEPFFDCYEPMTMMAGG-R----------PVFVSLKPGPIQNGELGSSSNWQLD---- 163 (422)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTC-E----------EEEEECBCCCCCSSSCCBGGGSBCC----
T ss_pred HHHHHHHHHHH--cCCCCEEEEcCCCchhhHHHHHHcCC-E----------EEEEecccccccccccccccCCCCC----
Confidence 36777777765 23446799999999997654443221 1 11122111 00 0011111
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc---
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ--- 149 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~--- 149 (284)
.+++++.++ +++++|+++..++..|.+. |++.+++|.++|++||+++|+||+|++|.+.|........+
T Consensus 164 ----~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 235 (422)
T 3fvs_A 164 ----PMELAGKFT---SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM 235 (422)
T ss_dssp ----HHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT
T ss_pred ----HHHHHhhcC---CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccc
Confidence 566666553 4688899888888888755 88999999999999999999999999987777522222222
Q ss_pred -CCCCcEEEeccccc-CCcceeEEEecHHHHHhchh--------------------h------------------hhHHH
Q psy11784 150 -GAVPDIITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L------------------DDNRP 189 (284)
Q Consensus 150 -g~~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l------------------~~~~~ 189 (284)
+...++.++||.++ .|+++|++++++++++.+.. + +++++
T Consensus 236 ~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (422)
T 3fvs_A 236 WERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQR 315 (422)
T ss_dssp GGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHH
T ss_pred cCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHH
Confidence 22244557899998 78999999999998876643 1 13445
Q ss_pred HHHHHHHHHHhc--------cCceeEEEEecccH------------HHHHHHHHHH-HCCcEEeecCCC---------CC
Q psy11784 190 SGKYLVRPLGIN--------LHIFWCLILLSITY------------YLYRYTRRMK-EAKIIVANEGEY---------GN 239 (284)
Q Consensus 190 ~~~~l~~~L~~~--------~G~~~~i~~~~~~~------------~~~~~~~~l~-~~Gv~~~~~~~~---------~~ 239 (284)
+.+++.+.|++. .|+++++++..... ...++++.++ ++||++.++..+ .+
T Consensus 316 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~ 395 (422)
T 3fvs_A 316 CRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH 395 (422)
T ss_dssp HHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence 556666677664 45566666531000 0457777766 579999986543 57
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 240 VLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 240 ~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
++|++. ..|+++|++++++|.+++++
T Consensus 396 ~iRis~--~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 396 YIRFCF--VKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEEEC--CCCHHHHHHHHHHHHHHHHC
T ss_pred eEEEEe--cCCHHHHHHHHHHHHHHHhh
Confidence 999974 45999999999999988754
No 66
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.85 E-value=3.7e-20 Score=167.83 Aligned_cols=233 Identities=14% Similarity=0.123 Sum_probs=156.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.... ...+|++...+||+....+...... +..+|.... . + .+++
T Consensus 91 ~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~-----~-d--------~~~l 143 (377)
T 3fdb_A 91 VRGLYIAIDHFTP--AQSKVIVPTPAYPPFFHLLSATQRE-----------GIFIDATGG-----I-N--------LHDV 143 (377)
T ss_dssp HHHHHHHHHHHSC--TTCCEEEEESCCTHHHHHHHHHTCC-----------EEEEECTTS-----C-C--------HHHH
T ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCcHhHHHHHHHcCCE-----------EEEccCCCC-----C-C--------HHHH
Confidence 3677777776522 2367888999999876554432211 122333221 1 1 6888
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc-Ccc---ccccccCCCCcEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG-SHF---WAFQTQGAVPDII 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G-~~~---~a~~~~g~~pDiv 156 (284)
++.++. ++.++++...++..|. .+|.+.+++|.++|++||+++|+||+|++|++.| ... ......+..+++.
T Consensus 144 ~~~l~~---~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 219 (377)
T 3fdb_A 144 EKGFQA---GARSILLCNPYNPLGM-VFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITIT 219 (377)
T ss_dssp HHHHHT---TCCEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEE
T ss_pred HHHhcc---CCCEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEE
Confidence 888873 3444544444777776 4578889999999999999999999999987777 211 1222233345677
Q ss_pred Eeccccc-CCcceeEEEe-cHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh-c-
Q psy11784 157 TVGKPMG-NGMPIGAVIT-SRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI-N- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~-~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~-~- 201 (284)
++||.++ +|+++|++++ ++++++.+.. .++++++.+++.+.|++ +
T Consensus 220 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (377)
T 3fdb_A 220 APSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIP 299 (377)
T ss_dssp CSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred eChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8999996 6899998776 7888776543 22556667777777776 2
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+++.++++. ......++++.|+++ ||++.++..+ .+++|++++ .+++++++++++|.+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 300 GAKITPMQATYLMWIDFR-DTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp TCEECCCSBCSEEEEECT-TSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred CceEecCCeeEEEEEECc-ccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 3444456663 211124577777765 9999986543 479999876 4899999999999988754
No 67
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.84 E-value=9.3e-20 Score=166.41 Aligned_cols=237 Identities=13% Similarity=0.122 Sum_probs=157.1
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
||++.+++.... ...+|++...+||+....+..... . +..+|.... ..+.-| .++++
T Consensus 102 ~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~-~----------~~~v~~~~~--~~~~~d--------~~~l~ 158 (391)
T 3h14_A 102 GGFLLAFTALFD--SGDRVGIGAPGYPSYRQILRALGL-V----------PVDLPTAPE--NRLQPV--------PADFA 158 (391)
T ss_dssp HHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHTTC-E----------EEEEECCGG--GTTSCC--------HHHHT
T ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCC-E----------EEEeecCcc--cCCCCC--------HHHHH
Confidence 566777665522 235688888888876644432211 0 112232210 111111 44444
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEeccc
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKP 161 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~ 161 (284)
+. ++.+|+++..++..|.+ .|.+.+++|.++|++||+++|+||+|++|.+.|.........+....+.++||.
T Consensus 159 ~~------~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 231 (391)
T 3h14_A 159 GL------DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKY 231 (391)
T ss_dssp TS------CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSST
T ss_pred hc------CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhc
Confidence 33 56778888778877764 477889999999999999999999999987766422222222222334478999
Q ss_pred cc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc---------
Q psy11784 162 MG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--------- 201 (284)
Q Consensus 162 l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--------- 201 (284)
++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 232 ~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 311 (391)
T 3h14_A 232 FSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPD 311 (391)
T ss_dssp TCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCC
T ss_pred cCCccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC
Confidence 98 79999999999988776654 224555666677777654
Q ss_pred cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 202 LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 202 ~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|+++++++........++++.|+++ ||++.++..+ .+++|++++. +++++++++++|.+++++..+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~~ 384 (391)
T 3h14_A 312 GAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARGE 384 (391)
T ss_dssp BTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC--
T ss_pred eeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhcc
Confidence 34556666632134567888998875 9999986533 4689998766 899999999999999987654
No 68
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.84 E-value=9.8e-20 Score=168.75 Aligned_cols=240 Identities=17% Similarity=0.132 Sum_probs=162.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.... ...+|+....+|++....+...... +..+|... ...+.-| ++.+
T Consensus 128 t~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~--~~~~~~d--------~~~l 184 (427)
T 3dyd_A 128 SQAIDLCLAVLAN--PGQNILVPRPGFSLYKTLAESMGIE-----------VKLYNLLP--EKSWEID--------LKQL 184 (427)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCE-----------EEEEEEEG--GGTTEEC--------HHHH
T ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCE-----------EEEEeccc--ccCCCCC--------HHHH
Confidence 3677777777642 3467888888998866544432210 11122110 0011111 5666
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE---E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII---T 157 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv---~ 157 (284)
++.++ .++.+|++...++..|. .++++++++|.++|++||+++|+||+|++|++.|..+.....++..++++ +
T Consensus 185 ~~~l~---~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S 260 (427)
T 3dyd_A 185 EYLID---EKTACLIVNNPSNPCGS-VFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGG 260 (427)
T ss_dssp HSSCC---TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEE
T ss_pred HHHhc---cCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEee
Confidence 66554 34666666655777776 56889999999999999999999999999988776333445556666666 8
Q ss_pred eccccc-CCcceeEEEec-------HHHHHhchh-------------------------------hhhHHHHHHHHHHHH
Q psy11784 158 VGKPMG-NGMPIGAVITS-------RKIAESLNC-------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~~~-------~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L 198 (284)
+||.++ .|+++|+++++ +++.+.+.. .++++++.+++.+.|
T Consensus 261 ~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L 340 (427)
T 3dyd_A 261 LAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGAL 340 (427)
T ss_dssp STTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999975 58999999997 456654432 224556667777777
Q ss_pred Hhc---------cCceeEEEEec----ccHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 199 GIN---------LHIFWCLILLS----ITYYLYRYTRRMK-EAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 199 ~~~---------~G~~~~i~~~~----~~~~~~~~~~~l~-~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+++ .|+++.+.+.. ......++++.|+ ++||++.++.. ..+++|++. .+++++|++++++|.
T Consensus 341 ~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~--~~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 341 AAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI--TVPEVMMLEACSRIQ 418 (427)
T ss_dssp HHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES--CSCHHHHHHHHHHHH
T ss_pred hcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE--CCCHHHHHHHHHHHH
Confidence 764 35566666631 1134567888886 78999998753 247899974 579999999999999
Q ss_pred HHHHHHh
Q psy11784 263 RIFTSLQ 269 (284)
Q Consensus 263 ~~l~~~~ 269 (284)
+++++..
T Consensus 419 ~~l~~~~ 425 (427)
T 3dyd_A 419 EFCEQHY 425 (427)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988753
No 69
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.84 E-value=4e-20 Score=170.15 Aligned_cols=242 Identities=14% Similarity=0.109 Sum_probs=161.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++.+.+||+....+... +.. +..+|.... ...+..| +++|
T Consensus 96 ~~al~~~~~~~~--~~gd~Vl~~~~~y~~~~~~~~~~-g~~----------~~~v~~~~~-~~~~~~d--------~~~l 153 (411)
T 2o0r_A 96 TEAIAAAVLGLV--EPGSEVLLIEPFYDSYSPVVAMA-GAH----------RVTVPLVPD-GRGFALD--------ADAL 153 (411)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCTTHHHHHHHT-TCE----------EEEEECEEE-TTEEECC--------HHHH
T ss_pred HHHHHHHHHHhc--CCCCEEEEeCCCcHhHHHHHHHc-CCE----------EEEeecccc-ccCCCCC--------HHHH
Confidence 367788877663 23467999999999976543322 111 112222110 0001111 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc----cCCCCcEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT----QGAVPDII 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~----~g~~pDiv 156 (284)
++.+. +++++|+++..++..|.+ +|.+++++|.++|++||+++|+||+|+++.+.|........ .+....+.
T Consensus 154 ~~~l~---~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 229 (411)
T 2o0r_A 154 RRAVT---PRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITIS 229 (411)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHhhc---cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEe
Confidence 77764 468889888888888865 57899999999999999999999999988766642222222 23334456
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 230 s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 309 (411)
T 2o0r_A 230 SAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFA 309 (411)
T ss_dssp EHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred echhhcCCccceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 8899998 78999999999998876643 124455666777777653
Q ss_pred -----cCceeEEEEecc-cHHHHHHHHHHH-HCCcEEeecCCC---------------CCEEEEEcCCCCCHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSI-TYYLYRYTRRMK-EAKIIVANEGEY---------------GNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 202 -----~G~~~~i~~~~~-~~~~~~~~~~l~-~~Gv~~~~~~~~---------------~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.|+++++++... .....++++.|+ ++||++.++..+ .+.+||+++ .++++++++++
T Consensus 310 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~ 387 (411)
T 2o0r_A 310 VHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIR 387 (411)
T ss_dssp ECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC--SCHHHHHHHHH
T ss_pred ecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec--CCHHHHHHHHH
Confidence 355677777321 123567888887 679999876322 468999875 48999999999
Q ss_pred HHHHHHHHHhh
Q psy11784 260 TLNRIFTSLQM 270 (284)
Q Consensus 260 ~l~~~l~~~~~ 270 (284)
+|.+++++...
T Consensus 388 ~l~~~~~~~~~ 398 (411)
T 2o0r_A 388 RLSVLAERPAT 398 (411)
T ss_dssp HHGGGGC----
T ss_pred HHHHHHhccCc
Confidence 99988766543
No 70
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6.9e-20 Score=170.81 Aligned_cols=236 Identities=14% Similarity=0.107 Sum_probs=161.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccC-CCC-------cCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPF-PDT-------YRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~ 72 (284)
+||++.+++... ....+|+..+.+||+....+..... . +..+|. ++. ....+..+
T Consensus 128 ~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~g~-~----------~~~v~~~~~~~~~~~~~~~~~~~~d---- 190 (447)
T 3b46_A 128 NEGILSCLMGLL--NAGDEVIVFEPFFDQYIPNIELCGG-K----------VVYVPINPPKELDQRNTRGEEWTID---- 190 (447)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCTTHHHHHHHTTC-E----------EEEEEEECCGGGGTSCBCSTTSEEC----
T ss_pred HHHHHHHHHHHc--CCCCEEEEeCCCchhHHHHHHHcCC-E----------EEEEeCCCccccccccccccCcccC----
Confidence 367888887662 2346799999999986654432211 1 111221 110 00011111
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc--cccc--cc
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH--FWAF--QT 148 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~--~~a~--~~ 148 (284)
.++|++.+. +++++|++++.++..|.+ +|++++++|.++|++||+++|+||+|++|.+.|.. .... ..
T Consensus 191 ----~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 262 (447)
T 3b46_A 191 ----FEQFEKAIT---SKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEI 262 (447)
T ss_dssp ----HHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHH
T ss_pred ----HHHHHHhhc---cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCC
Confidence 566766654 468889888878877865 57899999999999999999999999988766631 1222 13
Q ss_pred cCCCCcEEEeccccc-CCcceeEEEe-cHHHHHhchh---------------------------------hhhHHHHHHH
Q psy11784 149 QGAVPDIITVGKPMG-NGMPIGAVIT-SRKIAESLNC---------------------------------LDDNRPSGKY 193 (284)
Q Consensus 149 ~g~~pDiv~~sK~l~-~G~p~gav~~-~~~i~~~~~~---------------------------------l~~~~~~~~~ 193 (284)
++..+.+.++||.++ .|+++|++++ ++++++.+.. .++++++.++
T Consensus 263 ~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~ 342 (447)
T 3b46_A 263 GQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKI 342 (447)
T ss_dssp HTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHH
Confidence 456677789999998 7999999999 9998876643 1245566667
Q ss_pred HHHHHHhc--------cCceeEEEEecc--------------cHHHHHHHHHHH-HCCcEEeecCCC---------CCEE
Q psy11784 194 LVRPLGIN--------LHIFWCLILLSI--------------TYYLYRYTRRMK-EAKIIVANEGEY---------GNVL 241 (284)
Q Consensus 194 l~~~L~~~--------~G~~~~i~~~~~--------------~~~~~~~~~~l~-~~Gv~~~~~~~~---------~~~l 241 (284)
+.+.|+++ .|+++++++... .....++++.|. ++||++.|+..+ .+++
T Consensus 343 l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~i 422 (447)
T 3b46_A 343 FTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLL 422 (447)
T ss_dssp HHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEE
T ss_pred HHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEE
Confidence 77777654 466777776321 124567888887 589999887432 5789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHH
Q psy11784 242 LFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 242 r~~p~l~~t~~~id~~~~~l~~ 263 (284)
||+++ .++++|++++++|.+
T Consensus 423 Rls~~--~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 423 RFAVC--KDDAYLENAVERLKL 442 (447)
T ss_dssp EEECC--SCHHHHHHHHHHGGG
T ss_pred EEEEe--CCHHHHHHHHHHHHH
Confidence 99876 489999999999875
No 71
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.84 E-value=1.2e-19 Score=165.50 Aligned_cols=232 Identities=14% Similarity=0.122 Sum_probs=159.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.. .....+|++...+||+....+.... .. +..+|.... .+..+ +++|
T Consensus 101 ~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g-~~----------~~~v~~~~~---~~~~d--------~~~l 156 (386)
T 1u08_A 101 TEALYAAITAL--VRNGDEVICFDPSYDSYAPAIALSG-GI----------VKRMALQPP---HFRVD--------WQEF 156 (386)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTT-CE----------EEEEECCTT---TCCCC--------HHHH
T ss_pred HHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcC-CE----------EEEeecCcc---cCcCC--------HHHH
Confidence 36777777765 2234679999999998665433221 11 112332211 11122 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---ccccc-ccCCCCcEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---FWAFQ-TQGAVPDII 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~~a~~-~~g~~pDiv 156 (284)
++.+. +++++|+++..++..|.+ .|.+++++|.++|++||+++|+||+|++|.+.|.. +.... ..+....+.
T Consensus 157 ~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 232 (386)
T 1u08_A 157 AALLS---ERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVS 232 (386)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEE
T ss_pred HHhhc---ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEe
Confidence 77664 468888888778877865 57899999999999999999999999988666631 12221 234555677
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 233 s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 312 (386)
T 1u08_A 233 SFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLE 312 (386)
T ss_dssp EHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCE
T ss_pred cchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 8999998 68999999999998876643 124455666677766653
Q ss_pred -----cCceeEEEEeccc--HHHHHHHHHHH-HCCcEEeecCC------CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSIT--YYLYRYTRRMK-EAKIIVANEGE------YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 -----~G~~~~i~~~~~~--~~~~~~~~~l~-~~Gv~~~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+++++++. .. ....++++.|. ++||++.++.. ..+.+|++++ .++++|++++++|.+
T Consensus 313 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 313 ILPCEGTYFLLVDYS-AVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp ECCCCBSSEEEEECT-TTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred ecCCCceEEEEEecC-CCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence 3566777763 21 24567888887 68999988642 2468999876 489999999998853
No 72
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=4e-20 Score=170.06 Aligned_cols=236 Identities=11% Similarity=0.071 Sum_probs=159.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+.... .. +..+|... ..+..| +++|
T Consensus 119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-~~----------~~~v~~~~---~~~~~d--------~~~l 174 (404)
T 2o1b_A 119 KNGLVAVPTCVI--NPGDYVLLPDPGYTDYLAGVLLAD-GK----------PVPLNLEP---PHYLPD--------WSKV 174 (404)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCSSHHHHHHHTT-CE----------EEEEECCT---TTCCCC--------GGGS
T ss_pred HHHHHHHHHHhc--CCCCEEEEcCCCchhHHHHHHHCC-CE----------EEEeccCc---ccCcCC--------HHHH
Confidence 367777777652 223679999999999776544321 11 11223221 011111 4556
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc--ccccc-ccCCCCcEEE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH--FWAFQ-TQGAVPDIIT 157 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~--~~a~~-~~g~~pDiv~ 157 (284)
++.+. +++++|+++..++..|.+ +|.+++++|.++|++||+++|+||+|++|.+.|.. .+... ..+....+.+
T Consensus 175 ~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 250 (404)
T 2o1b_A 175 DSQII---DKTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYS 250 (404)
T ss_dssp CHHHH---HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEE
T ss_pred HHhhc---cCceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEe
Confidence 66664 347888887556667765 68899999999999999999999999988665531 11111 1122344668
Q ss_pred eccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHhc----
Q psy11784 158 VGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~~---- 201 (284)
++|.++ +|+++|++++++++++.+.. + ++++++.+++.+.|++.
T Consensus 251 ~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 330 (404)
T 2o1b_A 251 LSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPF 330 (404)
T ss_dssp STTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cchhccCchhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 999998 78999999999998876654 1 13455666777777654
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+++++.+. ......++++.|+ ++||++.++..+ .+++|++++. +++++++++++|.+++++
T Consensus 331 ~~~~~g~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 331 VHAKGGIYVWLETP-PGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp ECCCBSSEEEEECC-TTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred cCCCcceEEEEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 3556677763 3224567888887 579999986432 4799999875 788999999999887654
No 73
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.84 E-value=4.8e-20 Score=167.18 Aligned_cols=232 Identities=10% Similarity=-0.010 Sum_probs=155.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++.....++..+|++...+||+....+...... +..+|..+... +. . ++
T Consensus 92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~--~~----------~-~l 147 (376)
T 3ezs_A 92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAK-----------SLLMPLTKEND--FT----------P-SL 147 (376)
T ss_dssp HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCE-----------EEEEECCGGGT--SC----------C-CC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCE-----------EEEcccCCCCC--cc----------h-hH
Confidence 3677778877654333568999999999876654432211 11222221100 00 0 22
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc---------ccCC
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ---------TQGA 151 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~---------~~g~ 151 (284)
++.+. +++.+|++...++..|.. +|.+.+++|.++|++||+++|+||+|++|.+.|. ..... ..+.
T Consensus 148 ~~~~~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 222 (376)
T 3ezs_A 148 NEKEL---QEVDLVILNSPNNPTGRT-LSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKN 222 (376)
T ss_dssp CHHHH---HHCSEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTT
T ss_pred Hhhhc---cCCCEEEEcCCCCCcCCC-CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccCc
Confidence 33343 135566665447777764 5788899999999999999999999999877764 33322 2445
Q ss_pred CCcEEEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 152 VPDIITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 152 ~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
...+.++||.+| +|+++|++++++++++.+.. .++++++.+++.+.|+.
T Consensus 223 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 302 (376)
T 3ezs_A 223 VLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFKN 302 (376)
T ss_dssp EEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred EEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 566778999997 78999999999999887654 11334444445554432
Q ss_pred c----cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N----LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE------YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~----~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+ .|.++++.+. ...++++.|++ +||++.++.. ..+++|++++ .|++++++++++|.+++++
T Consensus 303 ~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 303 TLIYPYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp CCCCSBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence 1 4666777762 46678889987 8999988643 3479999876 3999999999999988753
No 74
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.84 E-value=3.9e-19 Score=162.47 Aligned_cols=237 Identities=11% Similarity=0.134 Sum_probs=165.0
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
+|++.+++.... .|+.+|++...+||+....+..... . +..+|.... .+.-| .++|+
T Consensus 110 ~al~~~~~~l~~-~g~d~vl~~~p~~~~~~~~~~~~g~-~----------~~~v~~~~~---~~~~d--------~~~l~ 166 (398)
T 3ele_A 110 ASLSICFRALTS-DAYDEFITIAPYFPEYKVFVNAAGA-R----------LVEVPADTE---HFQID--------FDALE 166 (398)
T ss_dssp HHHHHHHHHHCC-STTCEEEEESSCCTHHHHHHHHTTC-E----------EEEECCCTT---TSSCC--------HHHHH
T ss_pred HHHHHHHHHHcC-CCCCEEEEeCCCchhhHHHHHHcCC-E----------EEEEecCCc---CCcCC--------HHHHH
Confidence 677777776632 3447899999999987654433211 0 112332210 11112 56777
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH------hCCEEEEecccccCccccCcc-ccccccCCCCc
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE------IGGVVIADEIQCGMGRSGSHF-WAFQTQGAVPD 154 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tG~gr~G~~~-~a~~~~g~~pD 154 (284)
+.++ +++.+|++...++..|.+ .|.+.+++|.++|++ ||+++|+||+|++|.+.|... .....++....
T Consensus 167 ~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~ 242 (398)
T 3ele_A 167 ERIN---AHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLV 242 (398)
T ss_dssp HTCC---TTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEE
T ss_pred HHhC---cCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEE
Confidence 7664 467888887667777764 577889999999999 999999999999987766411 12233344455
Q ss_pred EEEeccccc-CCcceeEEEecHHHH------Hhchh---------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 IITVGKPMG-NGMPIGAVITSRKIA------ESLNC---------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 iv~~sK~l~-~G~p~gav~~~~~i~------~~~~~---------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.++||.++ .|+++|+++++++++ +.+.. .++++++.+++.+.|++
T Consensus 243 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~L~~ 322 (398)
T 3ele_A 243 CYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGDINAYKENRDLLYEGLTR 322 (398)
T ss_dssp EEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 568999998 899999999988732 22111 34678888999999987
Q ss_pred c--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+ .|+++++.+. . .....+++.|.++||++.++..+ .+++|+++. +++++|++++++|.++++++.
T Consensus 323 ~g~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 323 IGYHCFKPDGAFYMFVKAL-E-DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp HTCCEECCSBSSEEEEECS-S-SCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCeecCCCeeEEEEEEcC-C-CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Confidence 4 3555677663 2 24678888999999999986543 479999864 799999999999999988753
No 75
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.84 E-value=2e-19 Score=165.54 Aligned_cols=234 Identities=13% Similarity=0.087 Sum_probs=161.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCC--CcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPD--TYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 78 (284)
++|++.+++.. .....+|++.+.+||+....+.... .. +..+|... .+.. .+
T Consensus 112 t~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~~~~~~-------------~~ 165 (409)
T 2gb3_A 112 SEAILFSFAVI--ANPGDEILVLEPFYANYNAFAKIAG-VK----------LIPVTRRMEEGFAI-------------PQ 165 (409)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTHHHHHHHHHT-CE----------EEEEECCGGGTSCC-------------CT
T ss_pred HHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcC-CE----------EEEeccCCCCCCcc-------------HH
Confidence 46788888776 2234679999999998765443221 11 11223221 1100 12
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-CCcEE-
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-VPDII- 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~pDiv- 156 (284)
+|++.++ +++++|++++.++..|.+ +|++++++|.++|++||+++|+||+|+++.+.|+ +... ..+. ..|++
T Consensus 166 ~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~-~~~~~~~~i~~ 239 (409)
T 2gb3_A 166 NLESFIN---ERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA-LSIESDKVVVI 239 (409)
T ss_dssp TGGGGCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG-GGSCCTTEEEE
T ss_pred HHHHhhC---cCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc-cccCCCCEEEE
Confidence 3444443 368888888878877865 5789999999999999999999999998876664 3332 2233 34765
Q ss_pred -Eeccccc-CCcceeEEEecH-HHHHhchh------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 157 -TVGKPMG-NGMPIGAVITSR-KIAESLNC------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 157 -~~sK~l~-~G~p~gav~~~~-~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+++|.++ +|+++|++++++ ++++.+.. .++++++.+++.+.|+++
T Consensus 240 ~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 319 (409)
T 2gb3_A 240 DSVSKKFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGL 319 (409)
T ss_dssp EESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecchhccCCccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 6799998 689999999998 88765432 124556677777777753
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHC------CcEEeecCC-------CCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEA------KIIVANEGE-------YGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~------Gv~~~~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|++.++.+ + .....++++.|+++ ||++.++.. ..+.+|+.++ ++++++++++++|
T Consensus 320 ~~~~~~~~~~~~~~~~-~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l 395 (409)
T 2gb3_A 320 KRFTKPSGAFYITAEL-P-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVL 395 (409)
T ss_dssp CCBCCCSBSSEEEEEC-S-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHH
T ss_pred eeeeCCCeeEEEEEEe-C-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHH
Confidence 234445555 2 23467889999987 999988642 2579999987 7999999999999
Q ss_pred HHHHHHHhh
Q psy11784 262 NRIFTSLQM 270 (284)
Q Consensus 262 ~~~l~~~~~ 270 (284)
.++++++..
T Consensus 396 ~~~l~~~~~ 404 (409)
T 2gb3_A 396 MEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhh
Confidence 999988753
No 76
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.84 E-value=1.9e-19 Score=163.21 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=153.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++.+.+||+....+.... .. +..+| . | .++|
T Consensus 99 ~~a~~~~~~~~~--~~gd~vl~~~p~~~~~~~~~~~~g-~~----------~~~v~---------~-d--------~~~l 147 (370)
T 2z61_A 99 SLGLFFALSSII--DDGDEVLIQNPCYPCYKNFIRFLG-AK----------PVFCD---------F-T--------VESL 147 (370)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEESSCCTHHHHHHHHTT-CE----------EEEEC---------S-S--------HHHH
T ss_pred HHHHHHHHHHhc--CCCCEEEEeCCCchhHHHHHHHcC-CE----------EEEeC---------C-C--------HHHH
Confidence 367778877662 233679999999998765543221 10 11222 1 1 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CC-CCc--EE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GA-VPD--II 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~-~pD--iv 156 (284)
++.++ +++++|+++..++..|...+ .+ |.++|++||+++|+||+|+++.+.|. ......+ +. ..| +.
T Consensus 148 ~~~l~---~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~ 218 (370)
T 2z61_A 148 EEALS---DKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILIN 218 (370)
T ss_dssp HHHCC---SSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEE
T ss_pred HHhcc---cCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEe
Confidence 77765 36788888877888888766 33 99999999999999999998866664 3333322 12 224 44
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh--------------------hh------------hHHHHHHHHHHHHHhc--
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------LD------------DNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l~------------~~~~~~~~l~~~L~~~-- 201 (284)
+++|.++ .|+++|++++++++++.+.. ++ +++++.+++.+.|+++
T Consensus 219 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 298 (370)
T 2z61_A 219 GFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGW 298 (370)
T ss_dssp ESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7899998 78999999999998876643 21 3445566677777663
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+++++++ +. ...++.+.|+ ++||++.++..+ .+++|++++ ++++++++++++|.++++
T Consensus 299 ~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 299 EVNNPIGAYYVFPNI-GE--DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp BCCCCCBTTEECCBC-SS--CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred eecCCCcceEEEEec-CC--CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 244445555 22 4667889998 789999986432 468999988 699999999999988764
No 77
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=3.5e-19 Score=162.82 Aligned_cols=233 Identities=12% Similarity=0.138 Sum_probs=161.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.. .....+|++.+.+||+....+.... .. +..+|.... ..+.-+ .++|
T Consensus 111 t~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~--~~~~~d--------~~~l 167 (389)
T 1o4s_A 111 KQALFNAFMAL--LDPGDEVIVFSPVWVSYIPQIILAG-GT----------VNVVETFMS--KNFQPS--------LEEV 167 (389)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTT-CE----------EEEEECCGG--GTTCCC--------HHHH
T ss_pred HHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcC-CE----------EEEEecCCc--cCCCCC--------HHHH
Confidence 36777777765 2234678999999999765443221 11 112332210 011111 5677
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC--CCCc--EE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG--AVPD--II 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g--~~pD--iv 156 (284)
++.++ +++++|+++..++..|. .+|++++++|.++|++||+++|+||+|+++.+.|. ......+. -..| +.
T Consensus 168 ~~~l~---~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~~~~i~~~ 242 (389)
T 1o4s_A 168 EGLLV---GKTKAVLINSPNNPTGV-VYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDVSEGFDRIVYIN 242 (389)
T ss_dssp HHTCC---TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC-CCCHHHHCSSSTTEEEEE
T ss_pred HHhcc---cCceEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCHhhcCCCCCcEEEEe
Confidence 77664 35788888877777786 45789999999999999999999999998866553 22222221 1234 45
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|+++
T Consensus 243 s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 322 (389)
T 1o4s_A 243 GFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVE 322 (389)
T ss_dssp ESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred echhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 7899998 68999999999998876543 235667788888888774
Q ss_pred --cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+++++.+ + ....++++.|+ ++||++.++..+ .+++|++++ .+++++++++++|.++++
T Consensus 323 ~~~~~~~~~~~-~--~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 323 PEGAFYLFFKV-R--GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIEDFLN 387 (389)
T ss_dssp CSBSSEEEEEC-S--SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEeC-C--CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 345556665 2 23567889997 889999986433 369999877 399999999999988764
No 78
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.83 E-value=5.8e-19 Score=159.65 Aligned_cols=228 Identities=14% Similarity=0.075 Sum_probs=160.8
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
||++.+++... ....+|++...+||+....+..... . +..+|... .+..| .++++
T Consensus 96 ~a~~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~~g~-~----------~~~v~~~~----~~~~d--------~~~l~ 150 (367)
T 3euc_A 96 EIISMLALAAA--RPGAKVMAPVPGFVMYAMSAQFAGL-E----------FVGVPLRA----DFTLD--------RGAML 150 (367)
T ss_dssp HHHHHHHHHTC--CTTCEEEEEESCSCCSCHHHHTTTC-E----------EEEEECCT----TSCCC--------HHHHH
T ss_pred HHHHHHHHHHc--CCCCEEEEcCCCHHHHHHHHHHcCC-e----------EEEecCCC----CCCCC--------HHHHH
Confidence 56666666542 2235788889999987665443211 0 12233322 11112 67888
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+.+..+ ++++|+++..++..|.+ .+.+.+++|.++|++| |+++|+||+|++|+..+. .......+...++.+++
T Consensus 151 ~~l~~~--~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~i~~~s~s 226 (367)
T 3euc_A 151 AAMAEH--QPAIVYLAYPNNPTGNL-FDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW-MSRLTDFGNLLVMRTVS 226 (367)
T ss_dssp HHHHHH--CCSEEEEESSCTTTCCC-CCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS-GGGGGTCTTEEEEEECC
T ss_pred HHhhcc--CCCEEEEcCCCCCCCCC-CCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch-HHHHhhCCCEEEEecch
Confidence 888732 46788888777777765 4778899999999999 999999999998865443 33444455556677899
Q ss_pred ccccCCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------cC
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--------LH 203 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--------~G 203 (284)
|...+|+++|++++++++++.+.. .++++++.+++.+.|+++ .|
T Consensus 227 K~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~ 306 (367)
T 3euc_A 227 KLGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAA 306 (367)
T ss_dssp CTTSCSCCEEEEEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSS
T ss_pred hhcccccCceeeeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCC
Confidence 995468999999999999887654 224556667777777664 45
Q ss_pred ceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 204 IFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.++++.+ + ...++.+.|.++||++.++.. ..+++|++.+ |++|+++++++|++++
T Consensus 307 ~~~~~~~-~---~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 307 NFLLARV-P---DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp SEEEEEC-S---CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred eEEEEEC-C---CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 5666665 2 467788899999999998653 2479999854 9999999999998875
No 79
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.83 E-value=1.2e-19 Score=166.72 Aligned_cols=238 Identities=13% Similarity=0.073 Sum_probs=163.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++.. .....+|++.+.+||+....+.... .. +..+|.... ..+.-| .++|
T Consensus 111 ~~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~--~~~~~d--------~~~l 167 (406)
T 1xi9_A 111 TEALQLIFGAL--LDPGDEILVPGPSYPPYTGLVKFYG-GK----------PVEYRTIEE--EDWQPD--------IDDI 167 (406)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCHHHHHHHHHTT-CE----------EEEEEEEGG--GTSEEC--------HHHH
T ss_pred HHHHHHHHHHh--CCCCCEEEEcCCCCccHHHHHHHcC-CE----------EEEeecCCC--cCCcCC--------HHHH
Confidence 36777787766 2234679999999998765543221 11 112222110 001111 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC-cEE--E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP-DII--T 157 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p-Div--~ 157 (284)
++.++ .++++|++++.++..|.+ +|++++++|.++|++||+++|+||+|++|.+.+. ......++-.. |++ +
T Consensus 168 ~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~i~~~s 242 (406)
T 1xi9_A 168 RKKIT---DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGE-HISPGSLTKDVPVIVMNG 242 (406)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSC-CCCHHHHCSSSCEEEEEE
T ss_pred HHhhC---cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC-CCCHHHcCCCceEEEEec
Confidence 77775 358888888878888864 5889999999999999999999999998866333 33333333111 444 5
Q ss_pred eccccc-CCcceeEEE--ecH----HHHHhchh------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 158 VGKPMG-NGMPIGAVI--TSR----KIAESLNC------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~--~~~----~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
++|.++ .|+++|+++ +++ ++++.+.. .++++++.+++.+.|++
T Consensus 243 ~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 322 (406)
T 1xi9_A 243 LSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE 322 (406)
T ss_dssp STTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789998 689999999 888 88765533 12456667777777876
Q ss_pred c---------cCceeEEEEecc-cHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSI-TYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~-~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|++.++.+... .....++++.|+ ++||++.++..+ .+.+|++++ ++++++++++++|.+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l 400 (406)
T 1xi9_A 323 IPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFM 400 (406)
T ss_dssp STTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred CCCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHH
Confidence 4 244555555310 234678888887 889999987533 478999987 89999999999999998
Q ss_pred HHH
Q psy11784 266 TSL 268 (284)
Q Consensus 266 ~~~ 268 (284)
+++
T Consensus 401 ~~~ 403 (406)
T 1xi9_A 401 KER 403 (406)
T ss_dssp HHC
T ss_pred HHH
Confidence 765
No 80
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.83 E-value=1.2e-19 Score=165.62 Aligned_cols=235 Identities=12% Similarity=0.035 Sum_probs=160.0
Q ss_pred CcHHHHHHHHHHHccC---CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTG---RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~---r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+++......+ |..|++...+||+....+...... +..+|.+.. .+.-| +
T Consensus 101 ~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~-----------~~~v~~~~~---g~~~d--------~ 158 (396)
T 3jtx_A 101 REALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGE-----------IHFANCPAP---SFNPD--------W 158 (396)
T ss_dssp HHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCE-----------EEEEECCTT---TCCCC--------G
T ss_pred HHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCE-----------EEEeecCCC---CCccC--------H
Confidence 3677788877754311 368999999999876654432211 112332110 01111 4
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc--------cc
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ--------TQ 149 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~--------~~ 149 (284)
+++++.+.. ++.+|+++..++..|.+ .|.+.+++|.++|++||+++|+||+|++|.+.|....... ..
T Consensus 159 ~~l~~~~~~---~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (396)
T 3jtx_A 159 RSISEEVWK---RTKLVFVCSPNNPSGSV-LDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSR 234 (396)
T ss_dssp GGSCHHHHH---TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCC
T ss_pred HHHHHhhcc---CcEEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhccccc
Confidence 566666652 57777776657777764 5777799999999999999999999999877762122221 14
Q ss_pred CCCCcEEEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHH
Q psy11784 150 GAVPDIITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 150 g~~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L 198 (284)
+..+++.++||.++ .|+++|++++++++++.+.. .++++++.+++.+.|
T Consensus 235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 314 (396)
T 3jtx_A 235 QKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPIL 314 (396)
T ss_dssp TTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778999876 58999999999998877654 124555566666666
Q ss_pred Hhc-------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCC----------CCCEEEEEcCCCCCHHHHHHHHHH
Q psy11784 199 GIN-------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGE----------YGNVLLFLPAMCLTTENVLFIVST 260 (284)
Q Consensus 199 ~~~-------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----------~~~~lr~~p~l~~t~~~id~~~~~ 260 (284)
++. .|+++++++. . .....+++.|+ ++||++.++.. ..+++|++++. +++++++++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~ 390 (396)
T 3jtx_A 315 QQVFDVKLPDASFYIWLKVP-D-GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAED 390 (396)
T ss_dssp TTTSCCCCCSSSSEEEEECT-T-SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHHH
T ss_pred HhcCCccCCCeeEEEEEECC-C-CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHHH
Confidence 653 4667777773 2 24567888886 56999988643 24799998654 99999999999
Q ss_pred HHHHH
Q psy11784 261 LNRIF 265 (284)
Q Consensus 261 l~~~l 265 (284)
|.+++
T Consensus 391 l~~~l 395 (396)
T 3jtx_A 391 IVSLY 395 (396)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98764
No 81
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.83 E-value=6.7e-19 Score=162.92 Aligned_cols=189 Identities=11% Similarity=0.108 Sum_probs=133.8
Q ss_pred HHHHHHHHHhcC---------CCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---c
Q psy11784 77 AQAARNIMEAHR---------DNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---F 143 (284)
Q Consensus 77 ~~~l~~~i~~~~---------~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~ 143 (284)
.++|++.++... .++++|++.|. ++..|. ..|.+.+++|.++|++||+++|+||+|+++.+.|.. +
T Consensus 168 ~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~ 246 (425)
T 2r2n_A 168 PDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGN-SLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTF 246 (425)
T ss_dssp HHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCT
T ss_pred HHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCc
Confidence 677888886322 35788888775 555665 468999999999999999999999999987655531 1
Q ss_pred ccccccCCCCcEEEecccccCCcceeEEEecHHHHHhchh--------------------hh----------------hH
Q psy11784 144 WAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------LD----------------DN 187 (284)
Q Consensus 144 ~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l~----------------~~ 187 (284)
......+....+.++||.++.|+++|++++++++++.+.. ++ ++
T Consensus 247 ~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 326 (425)
T 2r2n_A 247 LSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFY 326 (425)
T ss_dssp GGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 2222223334456899999989999999999998876644 11 22
Q ss_pred HHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHH-HHHHHHHCCcEEeecCCC-------CCEEEEEcCCC
Q psy11784 188 RPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYR-YTRRMKEAKIIVANEGEY-------GNVLLFLPAMC 248 (284)
Q Consensus 188 ~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~-~~~~l~~~Gv~~~~~~~~-------~~~lr~~p~l~ 248 (284)
+++.+++.+.|++. .|+++++++. ....... +.+.|.++||++.|+..+ .+++|+.++.
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~- 404 (425)
T 2r2n_A 327 SNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVK-GINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS- 404 (425)
T ss_dssp HHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEET-TCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-
T ss_pred HHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeC-CCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-
Confidence 33444555555541 3556667763 2222334 577888999999986432 3789998774
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~ 268 (284)
.+++++++++++|.++++++
T Consensus 405 ~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 405 ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 59999999999999988653
No 82
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.83 E-value=2.9e-19 Score=161.71 Aligned_cols=231 Identities=13% Similarity=0.136 Sum_probs=152.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++.. +| .+|++...+||+....+..... + +..+|.... ..+. . +
T Consensus 86 ~~al~~~~~~~---~g-d~vl~~~p~y~~~~~~~~~~g~-~----------~~~v~~~~~--~~~~----------~--l 136 (364)
T 1lc5_A 86 TESIFTVASGL---KP-RRAMIVTPGFAEYGRALAQSGC-E----------IRRWSLREA--DGWQ----------L--T 136 (364)
T ss_dssp HHHHHHHHHHH---CC-SEEEEEESCCTHHHHHHHHTTC-E----------EEEEECCGG--GTTC----------C--C
T ss_pred HHHHHHHHHHc---CC-CeEEEeCCCcHHHHHHHHHcCC-e----------EEEEeCCcc--cccc----------h--h
Confidence 46888888877 45 7899999999997765543221 1 112232210 0010 0 1
Q ss_pred HHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCcEEEe
Q psy11784 81 RNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPDIITV 158 (284)
Q Consensus 81 ~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pDiv~~ 158 (284)
+++++...+++++|+ .+| ++..|. ..|.+++++|.++|++||+++|+||+|++|++.|...... +.++....+.++
T Consensus 137 ~~~~~~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 214 (364)
T 1lc5_A 137 DAILEALTPDLDCLFLCTP-NNPTGL-LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSL 214 (364)
T ss_dssp TTHHHHCCTTCCEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEES
T ss_pred HHHHHhccCCCCEEEEeCC-CCCCCC-CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEEC
Confidence 122222224455555 566 666676 4688999999999999999999999999886544312221 223333445589
Q ss_pred ccccc-CCcceeEEE-ecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 159 GKPMG-NGMPIGAVI-TSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 159 sK~l~-~G~p~gav~-~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
+|.++ +|+++|+++ +++++++.+.. .++++++.+++.+.|+++
T Consensus 215 sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 294 (364)
T 1lc5_A 215 TKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYP 294 (364)
T ss_dssp TTTTTCTTTCCEEEECCCHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC
T ss_pred chhhcCCccceEEEEECCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC
Confidence 99998 789999999 99998876644 123455667777777654
Q ss_pred -cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++.+. . ....+++.|.++||++.++..+ .+++|++. .+++|++++++.|+++++++
T Consensus 295 ~~g~~~~~~~~-~--~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 295 GRANYLLLRCE-R--EDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAI---RSAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp CSSSEEEEEES-C--TTCCHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHHC---
T ss_pred CCCeEEEEECC-C--cHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhhcc
Confidence 4566666663 2 2446888899999999987543 47899974 36899999999998887654
No 83
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.83 E-value=7e-19 Score=159.59 Aligned_cols=226 Identities=13% Similarity=0.048 Sum_probs=158.0
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
+|++.+++... ....+|++...+||+....+..... . +..+|..+. +..+ +++++
T Consensus 103 ~al~~~~~~l~--~~gd~Vl~~~~~y~~~~~~~~~~g~-~----------~~~v~~~~~----~~~d--------~~~l~ 157 (369)
T 3cq5_A 103 EILQQLLQAFG--GPGRTALGFQPSYSMHPILAKGTHT-E----------FIAVSRGAD----FRID--------MDVAL 157 (369)
T ss_dssp HHHHHHHHHHC--STTCEEEEEESSCTHHHHHHHHTTC-E----------EEEEECCTT----SSCC--------HHHHH
T ss_pred HHHHHHHHHhc--CCCCEEEEcCCChHHHHHHHHHcCC-E----------EEEecCCcC----CCCC--------HHHHH
Confidence 56777776652 2336799999999987665433211 1 112332211 1112 67788
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccC-CCCcEEEec
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQG-AVPDIITVG 159 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g-~~pDiv~~s 159 (284)
+.++.. ++++|++++.++..|...+ ++++.++|+.+++++|+||+|++|++... .+.. +.++ ..+++.+++
T Consensus 158 ~~i~~~--~~~~v~~~~~~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~~~s~s 230 (369)
T 3cq5_A 158 EEIRAK--QPDIVFVTTPNNPTGDVTS----LDDVERIINVAPGIVIVDEAYAEFSPSPS-ATTLLEKYPTKLVVSRTMS 230 (369)
T ss_dssp HHHHHH--CCSEEEEESSCTTTCCCCC----HHHHHHHHHHCSSEEEEECTTGGGCCSCC-GGGGTTTCTTTEEEEEESS
T ss_pred HHhhcc--CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEECCchhhcCCcc-hHHHHhhCCCCEEEEEech
Confidence 877632 4778889988988898776 67778888888899999999998865332 2222 2334 445677899
Q ss_pred cccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------cC
Q psy11784 160 KPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------LH 203 (284)
Q Consensus 160 K~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------~G 203 (284)
|+++ +|+++|++++++++++.+.. .++++++.+++.+.|++. .|
T Consensus 231 K~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 310 (369)
T 3cq5_A 231 KAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYAVVPSES 310 (369)
T ss_dssp STTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHTCEEECCSS
T ss_pred HhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEECCCCC
Confidence 9998 78999999999998876644 224556677777777653 45
Q ss_pred ceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 204 IFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.++++++ + ....++.+.|.++||++.+++ ..+++|++++ +++|+++++++|+++++
T Consensus 311 ~~~~~~~-~--~~~~~l~~~l~~~gi~v~~~~-~~~~iRis~~---~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 311 NFVFFGD-F--SDQHAAWQAFLDRGVLIRDVG-IAGHLRTTIG---VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp SEEEEEC-C--SSHHHHHHHHHHTTEECBCCS-CTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred eEEEEEC-C--CCHHHHHHHHHHCCEEEEECC-CCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 5666665 2 245678899999999999863 2578999876 89999999999988763
No 84
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.83 E-value=6.1e-19 Score=159.28 Aligned_cols=226 Identities=14% Similarity=0.046 Sum_probs=157.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++.. .....+|++...+|++....+..... .+..+|.... +.-| .+++
T Consensus 94 t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~----~~~d--------~~~l 148 (363)
T 3ffh_A 94 DELIELLTRVL--LDTTTNTVMATPTFVQYRQNALIEGA-----------EVREIPLLQD----GEHD--------LEGM 148 (363)
T ss_dssp HHHHHHHHHHH--CSTTCEEEEEESSCHHHHHHHHHHTC-----------EEEEEECCTT----SCCC--------HHHH
T ss_pred HHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHHHcCC-----------EEEEecCCCC----CCcC--------HHHH
Confidence 36777777755 23345788888888886554432211 0122333211 1112 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc----EE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD----II 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD----iv 156 (284)
++.+. +++++|+++..++..|... |.+.+.+|.+.|++ |+++|+||+|++|++ |+ +.........+| +.
T Consensus 149 ~~~i~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~-~~~~~~~~~~~~~~i~~~ 221 (363)
T 3ffh_A 149 LNAID---EKTTIVWICNPNNPTGNYI-ELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ-PEKHEKLVRTYKNLIITR 221 (363)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC-CCCCGGGGGTCTTEEEEE
T ss_pred HHhcc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc-ccCHHHHhhcCCCEEEEe
Confidence 77664 4688888888888888755 55666666666666 999999999998877 65 333333322344 55
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHh-c-----
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGI-N----- 201 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~-~----- 201 (284)
++||.++ .|+++|++++++++++.+.. .++.+++.+++.+.|++ .
T Consensus 222 s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 301 (363)
T 3ffh_A 222 TFSKIYGLASARVGYGIADKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY 301 (363)
T ss_dssp ESSSTTCCSSCCCEEEEECHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC
T ss_pred echhhhcCchhceeeeecCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC
Confidence 7899998 78999999999999887654 22556677778888877 2
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+. . ...++.+.|.++||++.++..+ .+++|++++ |++|+++++++|+++
T Consensus 302 ~~~~~~~~~~~~-~--~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 302 PANGNFVLIDLG-I--EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp CCCSSEEEEECS-S--CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECC-C--CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 5667677663 2 5678999999999999986543 579999866 999999999999875
No 85
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.83 E-value=3.2e-19 Score=162.09 Aligned_cols=232 Identities=16% Similarity=0.079 Sum_probs=162.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++.. .+...+|+....+|||.... .....+.. +..+|.+.. + ..| .++
T Consensus 84 ~~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~--~--~~d--------~~~ 139 (393)
T 3kgw_A 84 HCAMETALFNL--LEPGDSFLTGTNGIWGMRAAEIADRIGAR----------VHQMIKKPG--E--HYT--------LQE 139 (393)
T ss_dssp TTHHHHHHHHH--CCTTCEEEEEESSHHHHHHHHHHHHTTCE----------EEEEECCTT--C--CCC--------HHH
T ss_pred HHHHHHHHHhc--CCCCCEEEEEeCCchhHHHHHHHHHcCCc----------eEEEeCCCC--C--CCC--------HHH
Confidence 57888888876 44556788888888865321 11111111 122333221 1 111 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.++.. ++++|++++.++..|...+ +++|+++|++||+++|+||+|+ +| +. .+..+.+ .+|+++++
T Consensus 140 l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~-~~~~~~~--~~d~~~~s 207 (393)
T 3kgw_A 140 VEEGLAQH--KPVLLFLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GV-PIYMDQQ--GIDIMYSS 207 (393)
T ss_dssp HHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TS-CCCTTTT--TCCEEEEE
T ss_pred HHHHHhhC--CCcEEEEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--Cc-ccchhhc--CCCEEEec
Confidence 88888732 5788999999999998776 8899999999999999999997 32 11 2333333 36777665
Q ss_pred --ccccCCcceeEEEecHHHHHhch---------------------------------h---------------------
Q psy11784 160 --KPMGNGMPIGAVITSRKIAESLN---------------------------------C--------------------- 183 (284)
Q Consensus 160 --K~l~~G~p~gav~~~~~i~~~~~---------------------------------~--------------------- 183 (284)
|+++++.++|++++++++++.+. .
T Consensus 208 ~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 287 (393)
T 3kgw_A 208 SQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLEN 287 (393)
T ss_dssp SSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred CcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence 99988778999999998876541 0
Q ss_pred -hhhHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEc-C
Q psy11784 184 -LDDNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLP-A 246 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p-~ 246 (284)
.++++++++++.+.|+++ .+.+..+.+ +......++.+.|+++ ||++.++.. .++++|+.+ +
T Consensus 288 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (393)
T 3kgw_A 288 CWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTV-PAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLG 366 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEEC-CTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCG
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeC-CCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecc
Confidence 225666777888888775 133445555 3334567899999988 999987532 357999998 8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+.+|++++++++++|+++++++.
T Consensus 367 ~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 367 YNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHSC
T ss_pred cCCCHHHHHHHHHHHHHHHHhhh
Confidence 77899999999999999998764
No 86
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.83 E-value=6e-19 Score=160.95 Aligned_cols=238 Identities=11% Similarity=0.054 Sum_probs=158.7
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
||++.+++... ....+|++...+|||....+..... . +..+|.... .+.+..+ .++|+
T Consensus 98 ~al~~~~~~l~--~~gd~vl~~~p~y~~~~~~~~~~g~-~----------~~~v~~~~~-~~~~~~d--------~~~l~ 155 (390)
T 1d2f_A 98 YMVSELIRQWS--ETGEGVVIHTPAYDAFYKAIEGNQR-T----------VMPVALEKQ-ADGWFCD--------MGKLE 155 (390)
T ss_dssp HHHHHHHHHSS--CTTCEEEEEESCCHHHHHHHHHTTC-E----------EEEEECEEC-SSSEECC--------HHHHH
T ss_pred HHHHHHHHHhc--CCCCEEEEcCCCcHHHHHHHHHCCC-E----------EEEeecccC-CCccccC--------HHHHH
Confidence 56777777542 1236799999999997765543211 1 112222110 0011112 67888
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC---c-EEE
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP---D-IIT 157 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p---D-iv~ 157 (284)
+.++. .++++|++...++..|.+ .|.+++++|.++|++||+++|+||+|++|.+.|....... .+.+ | +.+
T Consensus 156 ~~l~~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~--~~~~~~~d~~~s 230 (390)
T 1d2f_A 156 AVLAK--PECKIMLLCSPQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS--NVARGDWALLTS 230 (390)
T ss_dssp HHHTS--TTEEEEEEESSCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGG--GTCCSSEEEEEC
T ss_pred HHhcc--CCCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHH--HcchhhHhhccC
Confidence 88762 257777765447767765 5788999999999999999999999999877665222221 2222 3 889
Q ss_pred eccccc-CCcceeEEEec-HHHHHhch----------h-----------------------hhhHHHHHHHHHHHHHh-c
Q psy11784 158 VGKPMG-NGMPIGAVITS-RKIAESLN----------C-----------------------LDDNRPSGKYLVRPLGI-N 201 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~~~-~~i~~~~~----------~-----------------------l~~~~~~~~~l~~~L~~-~ 201 (284)
+||.++ +|+++|+++++ +++++.+. . .++++++.+++.+.|++ +
T Consensus 231 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 310 (390)
T 1d2f_A 231 GSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAF 310 (390)
T ss_dssp SHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999998 78999999985 66654321 1 12455666777777776 3
Q ss_pred ---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|++.++++........++.+.|. ++||++.++..+ .+++|++++. +++++++++++|.+++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 311 PELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp SSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred CCCEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 234556666311124678899999 689999987543 4789998776 689999999999998876
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 389 ~ 389 (390)
T 1d2f_A 389 V 389 (390)
T ss_dssp H
T ss_pred h
Confidence 4
No 87
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.83 E-value=1.3e-18 Score=159.21 Aligned_cols=181 Identities=18% Similarity=0.235 Sum_probs=134.7
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCC--
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGA-- 151 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~-- 151 (284)
.++++++++... +++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ | ||+.|. .+. ..+++
T Consensus 164 ~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~-~~~-~~~~~~~ 237 (401)
T 2bwn_A 164 VAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGA-GVA-ERDGLMH 237 (401)
T ss_dssp HHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSC-CHH-HHHTCGG
T ss_pred HHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCc-eee-eccCccc
Confidence 577888887554 46899999999999998877 9999999999999999999999 3 577775 333 44444
Q ss_pred CCcE--EEecccccC-CcceeEEEecHHHHHhchh----------------------------------hhhHHHHHHHH
Q psy11784 152 VPDI--ITVGKPMGN-GMPIGAVITSRKIAESLNC----------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDi--v~~sK~l~~-G~p~gav~~~~~i~~~~~~----------------------------------l~~~~~~~~~l 194 (284)
.+|+ .++||+++. | |++++++++++.+.. .++++++.+++
T Consensus 238 ~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 238 RIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp GCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 2454 489999983 4 788888777654431 12455667777
Q ss_pred HHHHHhc-------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 195 VRPLGIN-------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 195 ~~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.+.|+++ .|.++++.+ +.......+++.|+ ++||++.++... .+.+|++++..+|++|+++++++|
T Consensus 315 ~~~L~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l 393 (401)
T 2bwn_A 315 KMRLKALGMPIIDHGSHIVPVVI-GDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAM 393 (401)
T ss_dssp HHHHHHHTCCBCCCSSSCEEEEC-CCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHH
T ss_pred HHHHHHCCCcccCCCCCeEEEEe-CChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHH
Confidence 7777764 344666666 33345678899996 789999876431 258999999999999999999999
Q ss_pred HHHHHH
Q psy11784 262 NRIFTS 267 (284)
Q Consensus 262 ~~~l~~ 267 (284)
++++++
T Consensus 394 ~~~~~~ 399 (401)
T 2bwn_A 394 DLLWAR 399 (401)
T ss_dssp HHHC--
T ss_pred HHHHHh
Confidence 988754
No 88
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.83 E-value=1e-18 Score=158.63 Aligned_cols=231 Identities=15% Similarity=0.106 Sum_probs=159.8
Q ss_pred CcHHHHHHHHHHHc-----------cCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCc
Q psy11784 1 SEANDLALQLARAY-----------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADD 69 (284)
Q Consensus 1 seA~e~AlklAr~~-----------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (284)
++|++.|++.++.. ++..+|+....+|++....+.... .. +..+|.... +.-|
T Consensus 96 t~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~----~~~d- 159 (397)
T 3f9t_A 96 TEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMD-LE----------YIYAPIKED----YTID- 159 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHT-CE----------EEEECBCTT----SSBC-
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcC-ce----------eEEEeeCCC----CcCC-
Confidence 47899999998875 235678888888887544433221 11 222333221 1111
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc--cccC------
Q psy11784 70 PQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG--RSGS------ 141 (284)
Q Consensus 70 ~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g--r~G~------ 141 (284)
.++|++.++.. ++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+++. .+|.
T Consensus 160 -------~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~ 226 (397)
T 3f9t_A 160 -------EKFVKDAVEDY--DVDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKG 226 (397)
T ss_dssp -------HHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTT
T ss_pred -------HHHHHHHHhhc--CCeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhccccccccc
Confidence 67888888732 5778888888888888876 9999999999999999999998642 2331
Q ss_pred --ccccccccCCCCcEEEecccccCCcceeEEEecHHH-HHhch---------------------h--------------
Q psy11784 142 --HFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKI-AESLN---------------------C-------------- 183 (284)
Q Consensus 142 --~~~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i-~~~~~---------------------~-------------- 183 (284)
..+.... ++.+.+.+++|.+++|+++|+++++++. .+.+. .
T Consensus 227 ~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 305 (397)
T 3f9t_A 227 VNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGRE 305 (397)
T ss_dssp CCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHH
T ss_pred ccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHH
Confidence 0123333 5555556778999888899999886543 22110 0
Q ss_pred -----hhhHHHHHHHHHHHHHhc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCC
Q psy11784 184 -----LDDNRPSGKYLVRPLGIN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLT 250 (284)
Q Consensus 184 -----l~~~~~~~~~l~~~L~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t 250 (284)
+++.+++.+++.+.|+++ .+.++.+.+ + ....+.+.|.++||++.++.. .+.+|+.++..+|
T Consensus 306 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~~gi~v~~~~~-~~~~Ri~~~~~~~ 380 (397)
T 3f9t_A 306 GQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIED-E---DYKEVCKKLRDRGIYVSVCNC-VKALRIVVMPHIK 380 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEEC-T---THHHHHHHHHHTTCBCEECSS-SSEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEe-C---CHHHHHHHHHhCCeEEeccCC-CCEEEEEEcCCCC
Confidence 336677888888888875 223334443 2 267899999999999988643 5899999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIFT 266 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~ 266 (284)
++++++++++|+++++
T Consensus 381 ~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 381 REHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999998764
No 89
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.82 E-value=1.2e-18 Score=157.01 Aligned_cols=225 Identities=12% Similarity=0.063 Sum_probs=151.8
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
+|++.+++.. .+|++...+||+....+..... . +..+|.... ..+. +++++
T Consensus 89 ~al~~~~~~~------d~vi~~~~~~~~~~~~~~~~g~-~----------~~~~~~~~~--~~~~----------~~~l~ 139 (361)
T 3ftb_A 89 EIIELSISLF------EKILIIVPSYAEYEINAKKHGV-S----------VVFSYLDEN--MCID----------YEDII 139 (361)
T ss_dssp HHHHHHHTTC------SEEEEEESCCTHHHHHHHHTTC-E----------EEEEECCTT--SCCC----------HHHHH
T ss_pred HHHHHHHHHc------CcEEEecCChHHHHHHHHHcCC-e----------EEEeecCcc--cCCC----------HHHHH
Confidence 5566666554 6788888888886655443211 0 112232211 1111 46777
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE---Ee
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII---TV 158 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv---~~ 158 (284)
+.++. +.+|+++..++..|. ..|.+.+++|.++|++||+++|+||+|++|.+.+. .......+..++++ ++
T Consensus 140 ~~l~~----~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~ 213 (361)
T 3ftb_A 140 SKIDD----VDSVIIGNPNNPNGG-LINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPS-SSFVGEIKNYSCLFIIRAM 213 (361)
T ss_dssp HHTTT----CSEEEEETTBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTT-SSSGGGTTTCSSEEEEEES
T ss_pred HhccC----CCEEEEeCCCCCCCC-CCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcc-cchhHhcccCCCEEEEeeC
Confidence 77752 555655544666676 45788899999999999999999999998866421 22223333334433 78
Q ss_pred ccccc-CCcceeEEE-ecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 159 GKPMG-NGMPIGAVI-TSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 159 sK~l~-~G~p~gav~-~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
+|.++ +|+++|+++ +++++++.+.. .++++++.+++.+.|+++
T Consensus 214 sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 293 (361)
T 3ftb_A 214 TKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF 293 (361)
T ss_dssp SSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred hhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec
Confidence 99998 789999999 89988887654 224556667777777664
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|.++++.+. . ....++++.|.++||++.++..+ .+++|++++ ++++++++++.|+++.+
T Consensus 294 ~~~~~~~~~~~~-~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 294 SPHANFVLCRLE-N-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp CCSSSEEEEEES-S-SCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcC-C-CCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 3445566653 2 34678999999999999986532 578999865 88889999888887764
No 90
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.81 E-value=1.9e-18 Score=156.44 Aligned_cols=230 Identities=13% Similarity=0.088 Sum_probs=160.2
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhc-CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD-ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+|++ |++.. .+...+|+..+.+|||....... ..+.. +..+|.+.. + .-| ++++
T Consensus 65 ~al~-~~~~~--~~~gd~vi~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~--~--~~d--------~~~l 119 (384)
T 3zrp_A 65 SAME-SVTSL--LKPNDKILVVSNGVFGDRWEQIFKRYPVN----------VKVLRPSPG--D--YVK--------PGEV 119 (384)
T ss_dssp HHHH-HGGGG--CCTTCEEEEECSSHHHHHHHHHHTTSSCE----------EEEECCSTT--C--CCC--------HHHH
T ss_pred HHHH-HHHhh--cCCCCEEEEecCCcchHHHHHHHHHcCCc----------EEEecCCCC--C--CCC--------HHHH
Confidence 5566 55432 34556788889999985433221 11111 222333221 1 111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec-
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG- 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s- 159 (284)
++.++. .++++|++++.++..|...+ +++|.++|++||+++|+||+|+ +|... .... ...+|+++++
T Consensus 120 ~~~i~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~---~~~~--~~~~d~~~~s~ 187 (384)
T 3zrp_A 120 EEEVRK--SEYKLVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSS-VGAEE---VKAE--EWNVDVYLTAS 187 (384)
T ss_dssp HHHHHH--SCEEEEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTT-TTTSC---CCTT--TTTCSEEEEET
T ss_pred HHHHHh--CCCcEEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccc-ccCcc---cccc--ccCCCEEEecC
Confidence 888873 24889999999999998877 9999999999999999999997 32211 1122 2347887655
Q ss_pred -ccccCCcceeEEEecHHHHHhc-------------------------------hh------------------------
Q psy11784 160 -KPMGNGMPIGAVITSRKIAESL-------------------------------NC------------------------ 183 (284)
Q Consensus 160 -K~l~~G~p~gav~~~~~i~~~~-------------------------------~~------------------------ 183 (284)
|+++++.++|++++++++++.+ ..
T Consensus 188 ~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~ 267 (384)
T 3zrp_A 188 QKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENR 267 (384)
T ss_dssp TSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 9998877899999999886655 01
Q ss_pred hhhHHHHHHHHHHHHHhc-------c-----CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-CCCEEEEEcCCCCC
Q psy11784 184 LDDNRPSGKYLVRPLGIN-------L-----HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-YGNVLLFLPAMCLT 250 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~-------~-----G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~lr~~p~l~~t 250 (284)
.++.+++.+++.+.|+++ . +.++.+.+. . ....++.+.|.++||.+.++.. ..+.+|+.++..+|
T Consensus 268 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~ 345 (384)
T 3zrp_A 268 IKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILK-V-ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVT 345 (384)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECS-S-SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECC-C-CCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCC
Confidence 225566777788888764 1 344455552 2 4567899999999999987542 22789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy11784 251 TENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~~~ 270 (284)
++++++++++|+++++++..
T Consensus 346 ~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 346 PNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998753
No 91
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.81 E-value=1.2e-18 Score=159.65 Aligned_cols=236 Identities=14% Similarity=0.137 Sum_probs=155.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcC-------CCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYR-------GEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 73 (284)
++|++.+++.. .....+|+....+||+....+..... . +..+|...... ..+.-+
T Consensus 95 ~~a~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~-~----------~~~~~~~~~~~~g~~~~~~~~~~d----- 156 (410)
T 3e2y_A 95 YGSLFNSIQGL--VDPGDEVIIMVPFYDCYEPMVRMAGA-V----------PVFIPLRSKPTDGMKWTSSDWTFD----- 156 (410)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESCCTTHHHHHHHTTC-E----------EEEEECEECCCCSSCCBGGGEECC-----
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCchhhHHHHHHcCC-E----------EEEEeccccccccccccccCCcCC-----
Confidence 36777777765 23346788888889886654433211 1 11122110000 001111
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC---
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG--- 150 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g--- 150 (284)
.+++++.+. +++++|++++.++..|... +++.+++|.++|++||+++|+||+|++|.+.|..........
T Consensus 157 ---~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 229 (410)
T 3e2y_A 157 ---PRELESKFS---SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMW 229 (410)
T ss_dssp ---HHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCG
T ss_pred ---HHHHHhhcC---CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCcc
Confidence 566666553 4688999998888888754 788899999999999999999999999887775222333322
Q ss_pred -CCCcEEEeccccc-CCcceeEEEecHHHHHhchh--------------------h------------------hhHHHH
Q psy11784 151 -AVPDIITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L------------------DDNRPS 190 (284)
Q Consensus 151 -~~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l------------------~~~~~~ 190 (284)
...++.++||.++ .|+++|++++++++++.+.. + ++++++
T Consensus 230 ~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (410)
T 3e2y_A 230 ERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVK 309 (410)
T ss_dssp GGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHH
T ss_pred CeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHH
Confidence 2234457899998 78999999999998876643 1 133455
Q ss_pred HHHHHHHHHhc--------cCceeEEEEeccc----------HHHHHHHHHHH-HCCcEEeecCCC---------CCEEE
Q psy11784 191 GKYLVRPLGIN--------LHIFWCLILLSIT----------YYLYRYTRRMK-EAKIIVANEGEY---------GNVLL 242 (284)
Q Consensus 191 ~~~l~~~L~~~--------~G~~~~i~~~~~~----------~~~~~~~~~l~-~~Gv~~~~~~~~---------~~~lr 242 (284)
.+++.+.|+++ .|+++++++.... ....++++.++ ++||++.++..+ .+++|
T Consensus 310 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iR 389 (410)
T 3e2y_A 310 RDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVR 389 (410)
T ss_dssp HHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEE
T ss_pred HHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEE
Confidence 66667777664 4566666664110 11346777665 679999987543 37899
Q ss_pred EEcCCCCCHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~ 263 (284)
|+ +..++++|++++++|.+
T Consensus 390 is--~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 390 FC--FIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp EE--CCCCHHHHHHHHHHHHT
T ss_pred EE--EcCCHHHHHHHHHHHHh
Confidence 97 56699999999999864
No 92
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.81 E-value=2.2e-18 Score=155.89 Aligned_cols=225 Identities=14% Similarity=0.155 Sum_probs=151.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+||++.+++.... .|+.+|+....+||+....+..... . +..+|..+ .+..| ++++
T Consensus 85 ~~ai~~~~~~~~~-~g~d~Vl~~~p~~~~~~~~~~~~g~-~----------~~~v~~~~----~~~~d--------~~~l 140 (356)
T 1fg7_A 85 DEGIELLIRAFCE-PGKDAILYCPPTYGMYSVSAETIGV-E----------CRTVPTLD----NWQLD--------LQGI 140 (356)
T ss_dssp HHHHHHHHHHHCC-TTTCEEEECSSSCTHHHHHHHHHTC-E----------EEECCCCT----TSCCC--------HHHH
T ss_pred HHHHHHHHHHHhC-CCCCEEEEeCCChHHHHHHHHHcCC-E----------EEEeeCCC----CCCCC--------HHHH
Confidence 3677777776532 3547899999999997655443211 1 11223221 11112 5566
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pDiv~~s 159 (284)
++.++ ++.+|++...++..|.+ .|.+.+++|.++|+ ||+++|+||+|++|++... .+.. +.++....+.++|
T Consensus 141 ~~~i~----~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~-~~~~~~~~~~~i~~~s~s 213 (356)
T 1fg7_A 141 SDKLD----GVKVVYVCSPNNPTGQL-INPQDFRTLLELTR-GKAIVVADEAYIEFCPQAS-LAGWLAEYPHLAILRTLS 213 (356)
T ss_dssp HTSCT----TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGC-SGGGTTTCTTEEEEEESS
T ss_pred HHHhc----CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCc-HHHHHhhCCCEEEEecch
Confidence 55543 57778877777777865 57899999999999 9999999999998864222 2222 2233334456899
Q ss_pred cccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 160 KPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 160 K~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
|.++ .|+++|++++++++++.+.. .++++++.+++.+.|+++
T Consensus 214 K~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 293 (356)
T 1fg7_A 214 KAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVF 293 (356)
T ss_dssp STTCCGGGCCEEEEECHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEEC
T ss_pred HhhcCchhhhEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEC
Confidence 9998 78999999999999887654 113445556677777653
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEee-cCCC--CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVAN-EGEY--GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~-~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|.++++.+ + ...++++.|.++||++.+ +..+ .+++|++++ +++|+++++++|++
T Consensus 294 ~~~~~~~~~~~-~---~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 294 DSETNYILARF-K---ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA 353 (356)
T ss_dssp CCSSSEEEEEE-T---THHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEC-C---CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence 344555555 2 456789999999999998 4332 368999875 68999999998864
No 93
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.81 E-value=4.6e-19 Score=162.85 Aligned_cols=234 Identities=12% Similarity=0.085 Sum_probs=152.3
Q ss_pred CcHHHHHHHHHHHccCC-----ccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTGR-----QNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r-----~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
++|++.++++++.+... .+|++...+||+....+....... +..+|.... ..+..+
T Consensus 109 ~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~----------~~~~~~~~~--~~~~~d------- 169 (412)
T 1ajs_A 109 TGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKD----------IRSYRYWDT--EKRGLD------- 169 (412)
T ss_dssp HHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSC----------EEEEECEET--TTTEEC-------
T ss_pred HHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCce----------eEEEeeecC--CCCccC-------
Confidence 47899999887766444 789999999999765544332110 111222100 011111
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc---CccccccccCCC
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG---SHFWAFQTQGAV 152 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~~a~~~~g~~ 152 (284)
.+++++.+...+.++.++++...++..|. .++.+++++|.++|++||+++|+||+|++|++.| . ++....+...
T Consensus 170 -~~~l~~~l~~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~~~~~ 246 (412)
T 1ajs_A 170 -LQGFLSDLENAPEFSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD-AWAIRYFVSE 246 (412)
T ss_dssp -HHHHHHHHHHSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH-THHHHHHHHT
T ss_pred -HHHHHHHHHhCCCCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCccccc-chHHHHHhcc
Confidence 67788888754445666655555555665 6789999999999999999999999999998765 3 3344333223
Q ss_pred Cc----EEEecccccC-CcceeEEEe---cHHH----HHhchh--------------------hh---------------
Q psy11784 153 PD----IITVGKPMGN-GMPIGAVIT---SRKI----AESLNC--------------------LD--------------- 185 (284)
Q Consensus 153 pD----iv~~sK~l~~-G~p~gav~~---~~~i----~~~~~~--------------------l~--------------- 185 (284)
+| +.++||.++. |+++|++++ ++++ ++.+.. ++
T Consensus 247 ~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 326 (412)
T 1ajs_A 247 GFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM 326 (412)
T ss_dssp TCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 44 4588999997 999999999 7763 332211 11
Q ss_pred --hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCH
Q psy11784 186 --DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTT 251 (284)
Q Consensus 186 --~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 251 (284)
+++++++++.+.|+++ .|++.++.+ + ...+.+.+.++||++.++ +|++++. +|+
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~l~~~gv~v~~~------~Ris~~~-~~~ 394 (412)
T 1ajs_A 327 ADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL-N----PKQVEYLINQKHIYLLPS------GRINMCG-LTT 394 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC-C----HHHHHHHHHTTCEECCTT------SEEEGGG-CCT
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC-C----HHHHHHHHHhCCEEecCC------cEEEeee-CCH
Confidence 2334555666666552 123333322 1 334445566889999852 5887663 599
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~ 268 (284)
+++++++++|+++++++
T Consensus 395 ~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 395 KNLDYVATSIHEAVTKI 411 (412)
T ss_dssp TTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988754
No 94
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.81 E-value=1.7e-18 Score=158.42 Aligned_cols=232 Identities=13% Similarity=0.104 Sum_probs=161.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++.. .....+|++...+|||.... .....+.. +..+|.+.. +.-| .++
T Consensus 74 t~al~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 129 (411)
T 3nnk_A 74 RAGIEAILVSA--IRPGDKVLVPVFGRFGHLLCEIARRCRAE----------VHTIEVPWG----EVFT--------PDQ 129 (411)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEECSHHHHHHHHHHHHTTCE----------EEEEECCTT----CCCC--------HHH
T ss_pred HHHHHHHHHHh--cCCCCEEEEecCCchHHHHHHHHHHcCCe----------EEEEecCCC----CCCC--------HHH
Confidence 36788888877 44567899999999985321 11111111 222343221 1111 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe-
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV- 158 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~- 158 (284)
|++.++.. ++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+ +|.. .+....+ .+|++++
T Consensus 130 l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~---~~~~~~~--~~d~~~~s 197 (411)
T 3nnk_A 130 VEDAVKRI--RPRLLLTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATAS-LGGN---PLETDVW--GLDAVSAG 197 (411)
T ss_dssp HHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-BTTB---CCCTTTT--TCSEEECC
T ss_pred HHHHHhhC--CCeEEEEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-cCCc---ccchhcc--CCcEEEec
Confidence 88888732 5789999999999998876 8899999999999999999986 3221 1233333 3566654
Q ss_pred -cccccCCcceeEEEecHHHHHhch-------------------------------------h-----------------
Q psy11784 159 -GKPMGNGMPIGAVITSRKIAESLN-------------------------------------C----------------- 183 (284)
Q Consensus 159 -sK~l~~G~p~gav~~~~~i~~~~~-------------------------------------~----------------- 183 (284)
+|+++++.++|++++++++++.+. .
T Consensus 198 ~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 277 (411)
T 3nnk_A 198 MQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGAR 277 (411)
T ss_dssp STTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHH
T ss_pred CccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHH
Confidence 599887778999999988865321 0
Q ss_pred --------------hhhHHHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecC--
Q psy11784 184 --------------LDDNRPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEG-- 235 (284)
Q Consensus 184 --------------l~~~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-- 235 (284)
.++.+++.+++.+.|+++ .+.++.+.+ +......++.+.|+++ ||.+.++.
T Consensus 278 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~g~~~ 356 (411)
T 3nnk_A 278 ECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVI-PQGINGDQARKLMLEDFGIEIGTSFGP 356 (411)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEEC-CTTCCHHHHHHHHHHHHSEEEEECCGG
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEEC-CCCCCHHHHHHHHHHhcCeEEeCccCC
Confidence 225556677777888764 134455555 3333567889999876 99998753
Q ss_pred CCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 236 EYGNVLLFLP-AMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 236 ~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
..++.+|+.+ +...|++++++++++|+++++++.
T Consensus 357 ~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 357 LHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 2357999998 888899999999999999998764
No 95
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.81 E-value=1.1e-18 Score=157.98 Aligned_cols=229 Identities=11% Similarity=0.084 Sum_probs=151.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhh-cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL-DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.+++... ....+||+...+||+...... ...+.. +..+|.+.. +..| .++
T Consensus 81 t~al~~~~~~~~--~~gd~vi~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 136 (376)
T 3f0h_A 81 TGSMEAVVMNCF--TKKDKVLVIDGGSFGHRFVQLCEIHEIP----------YVALKLEHG----KKLT--------KEK 136 (376)
T ss_dssp HHHHHHHHHHHC--CTTCCEEEEESSHHHHHHHHHHHHTTCC----------EEEEECCTT----CCCC--------HHH
T ss_pred hHHHHHHHHhcc--CCCCeEEEEeCChhhHHHHHHHHHcCCc----------eEEEeCCCC----CCCC--------HHH
Confidence 467888887663 345678888888888543211 111111 122333221 1112 566
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+ .+++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+++++. +..+.+++...+.+++
T Consensus 137 l~~~~---~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~~d~~~~s~~ 205 (376)
T 3f0h_A 137 LYEYD---NQNFTGLLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECGADVMITGSQ 205 (376)
T ss_dssp HHTTT---TSCCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHTCSEEEEETT
T ss_pred HHHhh---ccCceEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccCccEEEecCc
Confidence 66644 356889999999999998877 999999999999999999999865442 2334455544455667
Q ss_pred ccccCCcceeEEEecHHHHHhchh-------------------------------------h-------------hhHHH
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC-------------------------------------L-------------DDNRP 189 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~-------------------------------------l-------------~~~~~ 189 (284)
|+++++.++|++++++++++.+.. + ++.++
T Consensus 206 K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 285 (376)
T 3f0h_A 206 KVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIAS 285 (376)
T ss_dssp TTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 999876678999999887664420 1 12233
Q ss_pred HHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecC--CCCCEEEEEcCCCCCHHHHHHH
Q psy11784 190 SGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEG--EYGNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 190 ~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~--~~~~~lr~~p~l~~t~~~id~~ 257 (284)
+.+++.+.|+++ .+.++.+. +......++.+.|.++ ||++.++. ..++++|+.++..+|++|++++
T Consensus 286 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~ 363 (376)
T 3f0h_A 286 QAADFRAKIKDLPFELVSESPANGVTSVH--PTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTL 363 (376)
T ss_dssp HHHHHHHHTTTSSEEECCSSBBTTEEEEE--ESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCccCccccCceEEEEe--CCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHH
Confidence 444444444442 11111121 2233567899999988 99998763 2357899999999999999999
Q ss_pred HHHHHHHHH
Q psy11784 258 VSTLNRIFT 266 (284)
Q Consensus 258 ~~~l~~~l~ 266 (284)
+++|+++++
T Consensus 364 ~~~l~~~l~ 372 (376)
T 3f0h_A 364 VNAFKDLQK 372 (376)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 96
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.81 E-value=1.1e-17 Score=151.61 Aligned_cols=233 Identities=10% Similarity=0.082 Sum_probs=160.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++.. .....+|++...+|||.+.. .....+.. +..+|.+.. +..| .++
T Consensus 81 t~a~~~~~~~l--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 136 (386)
T 2dr1_A 81 TGIMEASIRNG--VSKGGKVLVTIIGAFGKRYKEVVESNGRK----------AVVLEYEPG----KAVK--------PED 136 (386)
T ss_dssp HHHHHHHHHHH--SCTTCEEEEEESSHHHHHHHHHHHHTTCE----------EEEEECCTT----CCCC--------HHH
T ss_pred HHHHHHHHHHh--hcCCCeEEEEcCCchhHHHHHHHHHhCCc----------eEEEecCCC----CCCC--------HHH
Confidence 46777777765 23456899999999984211 11111111 122333221 1112 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
|++.+++ .+++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+. |... +.... ..+|++++|
T Consensus 137 l~~~l~~-~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~~~---~~~~~--~~~di~~~s 205 (386)
T 2dr1_A 137 LDDALRK-NPDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAM-GGAD---IKFDK--WGLDVVFSS 205 (386)
T ss_dssp HHHHHHH-CTTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTB-TTBC---CCTTT--TTCSEEEEE
T ss_pred HHHHHhc-CCCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEccccc-cCcc---ccccc--cCCcEEEEe
Confidence 8888863 235889999999999998876 89999999999999999999973 3221 22222 347888766
Q ss_pred --ccccCCcceeEEEecHHHHHhc---------------------hh-----------------h-------------hh
Q psy11784 160 --KPMGNGMPIGAVITSRKIAESL---------------------NC-----------------L-------------DD 186 (284)
Q Consensus 160 --K~l~~G~p~gav~~~~~i~~~~---------------------~~-----------------l-------------~~ 186 (284)
|+++++.++|++++++++++.+ .. + ++
T Consensus 206 ~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~ 285 (386)
T 2dr1_A 206 SQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEM 285 (386)
T ss_dssp TTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999765689999998876543 11 1 13
Q ss_pred HHHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHH
Q psy11784 187 NRPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~ 253 (284)
++++.+++.+.|+++ .+.++++.+ +......++++.|.++||.+.++.. ..+.+|+.++..+|+++
T Consensus 286 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~ 364 (386)
T 2dr1_A 286 YEKRAKMVREGVREIGLDILAEPGHESPTITAVLT-PPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFED 364 (386)
T ss_dssp HHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEEC-CTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHH
T ss_pred HHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEc-CCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHH
Confidence 445566677777654 144556665 3233467899999999999987642 24799999998899999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
+++++++|+++++++.
T Consensus 365 i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 365 IQEMLDNLREVINELK 380 (386)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999998764
No 97
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.81 E-value=2.9e-18 Score=158.56 Aligned_cols=237 Identities=9% Similarity=0.071 Sum_probs=159.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhc-CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD-ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.+++... ....+|++.+.+||+....+.. .. .. +..+|.... .+..+ .++
T Consensus 123 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~~g-~~----------~~~~~~~~~---~~~~d--------~~~ 178 (430)
T 2x5f_A 123 THGLSLVGDLFV--NQDDTILLPEHNWGNYKLVFNTRNG-AN----------LQTYPIFDK---DGHYT--------TDS 178 (430)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEESSCCTHHHHHHTTTTC-CE----------EEEECCBCT---TSCBC--------SHH
T ss_pred hHHHHHHHHHHh--CCCCEEEEcCCcCccHHHHHHHhcC-Ce----------EEEEeccCc---cCCcC--------HHH
Confidence 367777777552 2236799999999997655433 21 11 112232110 01112 577
Q ss_pred HHHHHHhcCCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHH-----hCCEEEEecccccCccccCccccc--cccCC
Q psy11784 80 ARNIMEAHRDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHE-----IGGVVIADEIQCGMGRSGSHFWAF--QTQGA 151 (284)
Q Consensus 80 l~~~i~~~~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~-----~g~llI~DEv~tG~gr~G~~~~a~--~~~g~ 151 (284)
+++.++..+.++.+ ++.+| ++..|. .++.+++++|.++|++ ||+++|+||+|++|.+.|..+... ...+.
T Consensus 179 l~~~l~~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 256 (430)
T 2x5f_A 179 LVEALQSYNKDKVIMILNYP-NNPTGY-TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNL 256 (430)
T ss_dssp HHHHHHHCCSSEEEEEECSS-CTTTCC-CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTT
T ss_pred HHHHHHhcCCCCEEEEEcCC-CCCCCC-cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhc
Confidence 88888754445555 45566 777775 5689999999999999 999999999999887666411121 22233
Q ss_pred CCc------EEEeccccc-CCcceeEEEe---cHHHHHhchh------------------------hh------------
Q psy11784 152 VPD------IITVGKPMG-NGMPIGAVIT---SRKIAESLNC------------------------LD------------ 185 (284)
Q Consensus 152 ~pD------iv~~sK~l~-~G~p~gav~~---~~~i~~~~~~------------------------l~------------ 185 (284)
.++ +.++||.++ .|+++|++++ ++++++.+.. ++
T Consensus 257 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 336 (430)
T 2x5f_A 257 HSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQN 336 (430)
T ss_dssp CCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred cCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHH
Confidence 444 447899998 7899999999 8888765432 22
Q ss_pred --hHHHHHHHHHHHHH----hc--------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCCCCCEEEEEcCCCCC
Q psy11784 186 --DNRPSGKYLVRPLG----IN--------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGEYGNVLLFLPAMCLT 250 (284)
Q Consensus 186 --~~~~~~~~l~~~L~----~~--------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~lr~~p~l~~t 250 (284)
+++++.+++.+.|+ +. .|+++++.+. .....++++.|.+ +||++.++ ..+.+|++++. .+
T Consensus 337 ~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~-~~ 411 (430)
T 2x5f_A 337 IQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH--DVDPEALRKHLIDKYSIGVIAL--NATDIRIAFSC-VE 411 (430)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES--SSCHHHHHHHHHHHHCEECEEC--SSSEEEEEGGG-SC
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC--CCCHHHHHHHHHHhCCEEEecC--CCCeEEEEEec-CC
Confidence 12233455666666 32 3455677763 2346788999997 99999986 35789999886 49
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~ 268 (284)
++++++++++|.++++++
T Consensus 412 ~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 412 KDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998765
No 98
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=3.5e-18 Score=159.59 Aligned_cols=248 Identities=13% Similarity=0.140 Sum_probs=153.2
Q ss_pred CcHHHHHHHHHHHc---cCCcc--EEEEcCCCc-ccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCC--CCCchHH
Q psy11784 1 SEANDLALQLARAY---TGRQN--IVVVDAAYH-GTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEF--SADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~---~~r~~--il~~~~~yH-G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 72 (284)
|||++.|++.++.+ +|+.+ ||.. .|| +.+..+....+....... .. ...+.....++ ..|
T Consensus 101 t~A~~~al~~~~~~~~~~Gd~~~~viv~--~~~~~~~~~~~~~~g~~~~~~~-~~-----~~~~~~~~~~~~~~~d---- 168 (467)
T 1ax4_A 101 RGAENILFPVLLKYKQKEGKAKNPVFIS--NFHFDTTAAHVELNGCKAINIV-TE-----KAFDSETYDDWKGDFD---- 168 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSCEEEE--SSCCHHHHHHHHHTTCEEEECB-CG-----GGGCTTSCCTTTTCBC----
T ss_pred HHHHHHHHHHHHHhhccCCCccceEEEe--ccccchhhHHHhccCCceeccc-cc-----ccccccccCCcccccC----
Confidence 48999999999886 67651 4443 555 554444443322111000 00 00000000111 112
Q ss_pred HHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc---C-------ccccC
Q psy11784 73 AQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG---M-------GRSGS 141 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG---~-------gr~G~ 141 (284)
.++|++.++... +++++|++||+++.+|..+++.+++++|+++|++||++||+||++.. + +..|.
T Consensus 169 ----~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~ 244 (467)
T 1ax4_A 169 ----IKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA 244 (467)
T ss_dssp ----HHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC
T ss_pred ----HHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC
Confidence 678888887443 35999999999998866788999999999999999999999998752 0 12221
Q ss_pred ccccccccC----CCCcEE--EecccccCCcceeEEE-ec-H-HHHHhchh-----------------------------
Q psy11784 142 HFWAFQTQG----AVPDII--TVGKPMGNGMPIGAVI-TS-R-KIAESLNC----------------------------- 183 (284)
Q Consensus 142 ~~~a~~~~g----~~pDiv--~~sK~l~~G~p~gav~-~~-~-~i~~~~~~----------------------------- 183 (284)
.....+ ..+|++ +++|++ |+|+|+++ ++ + ++++.+..
T Consensus 245 ---~~~~~~~~~~~~~d~~~~s~sK~~--g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 319 (467)
T 1ax4_A 245 ---TIKEVIFDMYKYADALTMSAKKDP--LLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEG 319 (467)
T ss_dssp ---CHHHHHHHHGGGCSEEEEETTSTT--CCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHT
T ss_pred ---chhhhhhhhccccceEEEeccccC--CCCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHh
Confidence 000000 125665 456765 45765555 55 5 66543211
Q ss_pred -----hhhHHHHHHHHHHHHHhc--------cCceeEEE-------EecccHHHHHHHHHH-HHCCcEEeecCC------
Q psy11784 184 -----LDDNRPSGKYLVRPLGIN--------LHIFWCLI-------LLSITYYLYRYTRRM-KEAKIIVANEGE------ 236 (284)
Q Consensus 184 -----l~~~~~~~~~l~~~L~~~--------~G~~~~i~-------~~~~~~~~~~~~~~l-~~~Gv~~~~~~~------ 236 (284)
+++..++++++.+.|++. .|.++++. +.........+++.| .++||.+.+++.
T Consensus 320 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~ 399 (467)
T 1ax4_A 320 TEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRD 399 (467)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBC
T ss_pred hhhhHHHHHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccc
Confidence 112234566777777653 35555665 211112467889998 789999987321
Q ss_pred ---C------CCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 237 ---Y------GNVLLFLPA-MCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 237 ---~------~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+ .+++||+|| ..+|++|+++++++|+++++++.
T Consensus 400 ~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 400 PATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp TTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred cccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 1 279999999 56899999999999999998764
No 99
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.80 E-value=6.9e-19 Score=160.59 Aligned_cols=239 Identities=12% Similarity=0.060 Sum_probs=157.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCC----CcCCCC-CCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPD----TYRGEF-SADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~ 75 (284)
|+|+++++++. ..+.+||++..+|||.+....... .+....+.+++.+. .+...+ ..+
T Consensus 61 t~a~~~~~~~~---~~gd~vi~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~g~~~~~~~~~~~d------- 123 (379)
T 3ke3_A 61 TYGMEAVARQL---TIDEDCLIIRNGWFSYRWTQILEK-------GKFAKSSTVLTAERTEDTEAPKPFAPVD------- 123 (379)
T ss_dssp HHHHHHHHHHH---CTTCEEEEEECSHHHHHHHHHHHH-------HCCSSEEEEEECEESSCCSSCCCEECCC-------
T ss_pred hHHHHHHHHhC---CCCCeEEEEeCCchhHHHHHHHHH-------hCCCCceEEEeccccccccccCCCCCCC-------
Confidence 47888887653 456789999999999754322211 00000112233221 111111 111
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++.. ++.+|++..+.+..|. ..|.+++++|.++|++||+++|+||+|+ | +. .+..+.+++...+
T Consensus 124 -~~~l~~~i~~~--~~~~v~~~~~~~~~G~-~~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~-~~~~~~~~~d~~~ 194 (379)
T 3ke3_A 124 -IETAVAKIKED--KSAIVYAPHVETSSGI-ILSEEYIKALSEAVHSVGGLLVIDCIAS--G--CV-WLDMKELGIDVLI 194 (379)
T ss_dssp -HHHHHHHHHHH--TCSEEEEESEETTTTE-ECCHHHHHHHHHHHHHTTCEEEEECTTC--T--TC-CCCHHHHTCSEEE
T ss_pred -HHHHHHHHhhc--CCcEEEEEeecCCCce-eCCHHHHHHHHHHHHHcCCEEEEEeccc--C--Cc-cccccccCCCEEE
Confidence 67888888532 3556777777777775 4578899999999999999999999997 3 22 4555666765555
Q ss_pred EEecccccCCcceeEEEecHHHHHhch------------------------------h----------------------
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLN------------------------------C---------------------- 183 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~------------------------------~---------------------- 183 (284)
.+++|+++++.++|++++++++++.+. .
T Consensus 195 ~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~ 274 (379)
T 3ke3_A 195 SAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFD 274 (379)
T ss_dssp ECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred ecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHH
Confidence 566799987767899999988754321 0
Q ss_pred --hhhHHHHHHHHHHHHHhccCc------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC-------CCCEEE
Q psy11784 184 --LDDNRPSGKYLVRPLGINLHI------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE-------YGNVLL 242 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G~------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~lr 242 (284)
.++.+++++++++.|+++ |+ +..+.. +.. ...+.+.|.++||++.++.+ .++++|
T Consensus 275 ~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~--~~~-~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lR 350 (379)
T 3ke3_A 275 ILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYT--ERD-DMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFR 350 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEEC--SCH-HHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEcc--CCc-chHHHHHHHHCCeEEeCCccccccccCcCCEEE
Confidence 124456677777777764 21 112211 111 12236778899999987642 257999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
++++..+|++||++++++|+++++++.
T Consensus 351 is~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 351 LGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp EECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 100
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.80 E-value=2.5e-18 Score=163.03 Aligned_cols=237 Identities=14% Similarity=0.046 Sum_probs=164.1
Q ss_pred CcHHHHHHHHHHHccC------CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHH
Q psy11784 1 SEANDLALQLARAYTG------RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQ 74 (284)
Q Consensus 1 seA~e~AlklAr~~~~------r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (284)
++|++.|++.++...+ +.+|++...+|++....+.... .. +..+|.... +.-|
T Consensus 170 t~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G-~~----------v~~v~~~~~----~~~d------ 228 (514)
T 3mad_A 170 TESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFG-IK----------LVRTPLDAD----YRAD------ 228 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHT-CE----------EEEECBCTT----SCBC------
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcC-Ce----------eEEeeeCCC----CCCC------
Confidence 4799999999988742 3688988888888544333221 11 223343221 1112
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-----ccccC--cccccc
Q psy11784 75 KYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-----GRSGS--HFWAFQ 147 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-----gr~G~--~~~a~~ 147 (284)
+++|++.++ +++++|++++.++..|.+.+ +++|.++|++||++||+||+|++| +++|. ..+...
T Consensus 229 --~~~Le~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~ 299 (514)
T 3mad_A 229 --VAAMREAIT---PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFR 299 (514)
T ss_dssp --HHHHHHHCC---TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTT
T ss_pred --HHHHHHHhc---cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccccc
Confidence 677888775 46899999999998898876 999999999999999999999976 33342 013334
Q ss_pred ccCCCCcEEEecccccCCcceeEEEecHHHHHhch----------------------------h---------------h
Q psy11784 148 TQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLN----------------------------C---------------L 184 (284)
Q Consensus 148 ~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~----------------------------~---------------l 184 (284)
..|+...+.+++|.+.+|+++|+++++++...... . +
T Consensus 300 ~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~ 379 (514)
T 3mad_A 300 LEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDAT 379 (514)
T ss_dssp STTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHH
Confidence 44553333345699888889999998876553210 0 3
Q ss_pred hhHHHHHHHHHHHHHhccC--------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcC-CCCCHHHHH
Q psy11784 185 DDNRPSGKYLVRPLGINLH--------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPA-MCLTTENVL 255 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~~G--------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~-l~~t~~~id 255 (284)
++..++++++.+.|+++.| .++.+.. ......++.+.|.++||++. +..+++.+|+.++ ...++++++
T Consensus 380 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~Gi~v~-g~~~~~~~Ri~~~~~~~~~e~i~ 456 (514)
T 3mad_A 380 RRILQAADRLKAGVRAIPSLKILGDPLWVIAVAS--DELNIYQVMEEMAGRGWRLN-GLHRPPAFHVALTLRHTEPGVVD 456 (514)
T ss_dssp HHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEEC--SSSCHHHHHHHHHTTTCBCE-EETTTTEEEEECCGGGGSTTHHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeC--CCCCHHHHHHHHHhcCCEec-cCCCCCeEEEEEecCCCCHHHHH
Confidence 3667778888888887512 2333332 22346789999999999884 3334678999987 556779999
Q ss_pred HHHHHHHHHHHHHhh
Q psy11784 256 FIVSTLNRIFTSLQM 270 (284)
Q Consensus 256 ~~~~~l~~~l~~~~~ 270 (284)
+++++|+++++++.+
T Consensus 457 ~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 457 RFLADLQDAVAQVRA 471 (514)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 101
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.79 E-value=1.4e-18 Score=158.68 Aligned_cols=230 Identities=15% Similarity=0.126 Sum_probs=150.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.++++.+.++...+|++...+||+....+...... +..+|.... ..+..+ .+++
T Consensus 101 ~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~--~~~~~d--------~~~l 159 (394)
T 2ay1_A 101 TGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLP-----------VQTYRYFDA--ETRGVD--------FEGM 159 (394)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCC-----------EEEEECEET--TTTEEC--------HHHH
T ss_pred hhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCc-----------eEEEecccc--cCCccC--------HHHH
Confidence 4789999998887655567999999999976654432211 112222100 001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-cccccccc-CCCCcE---
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQTQ-GAVPDI--- 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~~-g~~pDi--- 155 (284)
++.++..+...+++++...++..|. .+|.+++++|.++|++||+++|+||+|++|++.|. .......+ ...+++
T Consensus 160 ~~~l~~~~~~~~~~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (394)
T 2ay1_A 160 KADLAAAKKGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIA 238 (394)
T ss_dssp HHHHHTCCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEE
Confidence 8888744334667777877877776 56899999999999999999999999999876541 02222222 123443
Q ss_pred EEeccccc-CCcceeEEEe---cHHHHHh----chh--------------------hh-----------------hHHHH
Q psy11784 156 ITVGKPMG-NGMPIGAVIT---SRKIAES----LNC--------------------LD-----------------DNRPS 190 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~---~~~i~~~----~~~--------------------l~-----------------~~~~~ 190 (284)
.++||.++ +|+++|++++ ++++++. +.. ++ +++++
T Consensus 239 ~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 318 (394)
T 2ay1_A 239 ASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRL 318 (394)
T ss_dssp EECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 37899999 7999999998 5654322 210 11 23344
Q ss_pred HHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 191 GKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 191 ~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
.+++.+.|+++ .|+++++++. ...+.+.+.++||++.++ +|++++ .+|++++++++
T Consensus 319 ~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~l~~~gi~v~~~------~Ris~~-~~~~~~i~~~~ 386 (394)
T 2ay1_A 319 REQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT-----PEQVKRIKEEFGIYMVGD------SRINIA-GLNDNTIPILA 386 (394)
T ss_dssp HHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT------CEEEGG-GCCTTTHHHHH
T ss_pred HHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC-----HHHHHHHHHhCCEEecCC------CeEEee-cCCHhhHHHHH
Confidence 55565655532 2445454441 235666777899999852 589877 57999999999
Q ss_pred HHHHHH
Q psy11784 259 STLNRI 264 (284)
Q Consensus 259 ~~l~~~ 264 (284)
++|+++
T Consensus 387 ~~l~~~ 392 (394)
T 2ay1_A 387 RAIIEV 392 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 999765
No 102
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.79 E-value=2.8e-18 Score=156.96 Aligned_cols=232 Identities=12% Similarity=0.141 Sum_probs=151.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccch--hhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN--LLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|+|++.|++.+ .....+|++...+||+... .+....+... ..++.+-. ...+..| .+
T Consensus 95 t~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~-~~~~~~d--------~~ 153 (407)
T 2dkj_A 95 SQANMAVYMAL--MEPGDTLMGMDLAAGGHLTHGSRVNFSGKLY----------KVVSYGVR-PDTELID--------LE 153 (407)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEECGGGTCCGGGTCTTSHHHHHS----------EEEEECCC-TTTSSCC--------HH
T ss_pred HHHHHHHHHHh--cCCCCEEEEecccccCccchHHHHHhcCceE----------EEEecCCC-cccCccC--------HH
Confidence 35778888877 3345678888888877631 2211111100 01111100 0011112 67
Q ss_pred HHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCcEE
Q psy11784 79 AARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pDiv 156 (284)
++++.++.. ++++|++ +|.++ ...+ +++|.++|++||+++|+||+|++ +...|. ... ..+ .+|++
T Consensus 154 ~l~~~l~~~--~~~~v~~~~p~~~---~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~~-~~di~ 220 (407)
T 2dkj_A 154 EVRRLALEH--RPKVIVAGASAYP---RFWD----FKAFREIADEVGAYLVVDMAHFAGLVAAGL-HPN--PLP-YAHVV 220 (407)
T ss_dssp HHHHHHHHH--CCSEEEECCSSCC---SCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTC-SCC--CTT-TCSEE
T ss_pred HHHHHHhhc--CCeEEEEeccccC---CCCC----HHHHHHHHHHcCCEEEEEccccccccccCc-cCC--ccc-cccEE
Confidence 788888632 4667777 78765 3333 89999999999999999999985 533443 211 112 27887
Q ss_pred --EecccccCCcceeEEEec-HHHHHhchh---------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 157 --TVGKPMGNGMPIGAVITS-RKIAESLNC---------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 157 --~~sK~l~~G~p~gav~~~-~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+++|+++| .++|+++++ +++++.+.. .++.+++.+++.+.|++
T Consensus 221 ~~s~sK~l~g-~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 299 (407)
T 2dkj_A 221 TSTTHKTLRG-PRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR 299 (407)
T ss_dssp EEESSGGGCC-CSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccCCC-CCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 78999984 467999999 788776543 22556667777777776
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--------CCCEEEEEcCCC----CCHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--------YGNVLLFLPAMC----LTTENVLFIVS 259 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------~~~~lr~~p~l~----~t~~~id~~~~ 259 (284)
+ .|.++++.+.........+.+.|.++||++.++.. ..+.+|++++.. +|++|++++++
T Consensus 300 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~ 379 (407)
T 2dkj_A 300 RGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAE 379 (407)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHH
T ss_pred CCceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHH
Confidence 4 34566666632112467788899999999987532 246899998763 79999999999
Q ss_pred HHHHHHHH
Q psy11784 260 TLNRIFTS 267 (284)
Q Consensus 260 ~l~~~l~~ 267 (284)
+|++++++
T Consensus 380 ~l~~~~~~ 387 (407)
T 2dkj_A 380 LIDRALLE 387 (407)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999987
No 103
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.79 E-value=8.2e-18 Score=153.32 Aligned_cols=228 Identities=17% Similarity=0.122 Sum_probs=157.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhh-cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL-DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.+++... ....+|+....+||+.+.... ...+.. +..+|.+.. +..+ .++
T Consensus 95 t~al~~~~~~~~--~~gd~Vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 150 (393)
T 1vjo_A 95 TAAMEATIANAV--EPGDVVLIGVAGYFGNRLVDMAGRYGAD----------VRTISKPWG----EVFS--------LEE 150 (393)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESSHHHHHHHHHHHHTTCE----------EEEEECCTT----CCCC--------HHH
T ss_pred HHHHHHHHHhcc--CCCCEEEEEcCChhHHHHHHHHHHcCCc----------eEEEecCCC----CCCC--------HHH
Confidence 468888888773 345689999999999432111 111111 122333221 1111 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
|++.++.. ++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+ +|... .. .....+|+++.|
T Consensus 151 l~~~l~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~---~~--~~~~~~di~~~s 218 (393)
T 1vjo_A 151 LRTALETH--RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVP---IF--LDAWGVDLAYSC 218 (393)
T ss_dssp HHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSC---CC--TTTTTCSEEECC
T ss_pred HHHHHhhC--CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcC---Cc--ccccCccEEEEc
Confidence 88888732 5778999999999998876 8999999999999999999998 66432 12 223568998766
Q ss_pred --ccccCCcceeEEEecHHHHHhc------------------------h----h------------------------hh
Q psy11784 160 --KPMGNGMPIGAVITSRKIAESL------------------------N----C------------------------LD 185 (284)
Q Consensus 160 --K~l~~G~p~gav~~~~~i~~~~------------------------~----~------------------------l~ 185 (284)
|+++++.++|++++++++++.+ . . .+
T Consensus 219 ~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~ 298 (393)
T 1vjo_A 219 SQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQ 298 (393)
T ss_dssp SSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHH
Confidence 9998766899999999877543 0 1 22
Q ss_pred hHHHHHHHHHHHHHhc-------cC----ceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEc-CCCCC
Q psy11784 186 DNRPSGKYLVRPLGIN-------LH----IFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLP-AMCLT 250 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~-------~G----~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p-~l~~t 250 (284)
+++++.+++.+.|+++ .| .++.+.+ +......++++.|.++ ||++.++.. ..+.+|+.+ ++..+
T Consensus 299 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~ 377 (393)
T 1vjo_A 299 RHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCI-PDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSR 377 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEEC-CTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCS
T ss_pred HHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEc-CCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCCh
Confidence 4566777788888764 12 2334444 2233467899999988 999988643 357999995 56778
Q ss_pred HHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIF 265 (284)
Q Consensus 251 ~~~id~~~~~l~~~l 265 (284)
++++++++++|.+++
T Consensus 378 ~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 378 KESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999998875
No 104
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.79 E-value=1.4e-17 Score=149.64 Aligned_cols=231 Identities=13% Similarity=0.128 Sum_probs=156.8
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
+|++.+++... ....+|+....+|++....+..... . +..+|.... +.-| .++++
T Consensus 79 ~a~~~~~~~l~--~~gd~vl~~~~~~~~~~~~~~~~g~-~----------~~~~~~~~~----~~~d--------~~~l~ 133 (354)
T 3ly1_A 79 EGIRAAIEAYA--SLEAQLVIPELTYGDGEHFAKIAGM-K----------VTKVKMLDN----WAFD--------IEGLK 133 (354)
T ss_dssp HHHHHHHHHHC--CTTCEEEEESSSCTHHHHHHHHTTC-E----------EEEECCCTT----SCCC--------HHHHH
T ss_pred HHHHHHHHHHh--CCCCeEEECCCCchHHHHHHHHcCC-E----------EEEecCCCC----CCCC--------HHHHH
Confidence 56666666542 2235788888888886554432211 0 122333211 1112 67888
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc--cccc-ccc-CCCCcEEE
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH--FWAF-QTQ-GAVPDIIT 157 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~--~~a~-~~~-g~~pDiv~ 157 (284)
+.++++ +++.+|+++..++..|.+. +.+.+++|.++| +||+++|+||+|++|.+.|.. .... ..+ +....+.+
T Consensus 134 ~~l~~~-~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 210 (354)
T 3ly1_A 134 AAVAAY-SGPSIVYLVNPNNPTGTIT-PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKT 210 (354)
T ss_dssp HHHHTC-SSCEEEEEESSCTTTCCCC-CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEE
T ss_pred HHhccC-CCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEee
Confidence 888632 4578888877777777654 667788888888 799999999999988766541 1111 112 33344557
Q ss_pred eccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 158 VGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 158 ~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 211 ~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 290 (354)
T 3ly1_A 211 FSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLKLPYLPS 290 (354)
T ss_dssp SSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC
T ss_pred ChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC
Confidence 899998 78999999999999887654 225566677777777664
Q ss_pred cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++++.+. . ....+.+.|.++||++. +.. ..+.+|++.. +++|+++++++|++++++
T Consensus 291 ~~~~~~~~~~-~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 291 EGNFVFHQLV-V--PLKDYQTHMADAGVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp CSSEEEEECS-S--CHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEECC-C--CHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 5667677663 2 46788999999999988 432 3579999843 899999999999988753
No 105
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.79 E-value=3.7e-18 Score=158.73 Aligned_cols=174 Identities=10% Similarity=0.060 Sum_probs=128.9
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc----CCCCcEEEeccccc-
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ----GAVPDIITVGKPMG- 163 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~----g~~pDiv~~sK~l~- 163 (284)
+++.+|+++..++..|. .++.+.+++|.++|++||+++|+||+|++|++.|........+ +....+.++||+++
T Consensus 208 ~~~~~v~l~~p~NPtG~-~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 286 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGA-AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGF 286 (449)
T ss_dssp CCCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTC
T ss_pred CCCCEEEEeCCCCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCC
Confidence 45778888776777776 5588899999999999999999999999987766322222222 23345678999998
Q ss_pred CCcceeEEEecHHHHH--------hchh--------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 164 NGMPIGAVITSRKIAE--------SLNC--------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~--------~~~~--------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
.|+++|++++++++++ .+.. .++++++.+++.+.|+++
T Consensus 287 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 366 (449)
T 3qgu_A 287 TGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGF 366 (449)
T ss_dssp TTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7999999999887764 1211 224566677778888764
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++++.+ + .....++++.|+++ ||++.|+.. ..+++||+ +..++++|++++++|.+++++
T Consensus 367 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 367 SVYGGDDAPYIWVGF-P-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp CEEESSSSSEEEEEC-T-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC-
T ss_pred eeeCCCCeeEEEEEC-C-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 356666666 3 33467888888875 999998643 24799997 667999999999999988754
No 106
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.79 E-value=1.5e-17 Score=153.11 Aligned_cols=183 Identities=11% Similarity=0.076 Sum_probs=131.5
Q ss_pred HHHHHHHHHhc--CCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHH------HhCCEEEEecccccCccccCc--ccc
Q psy11784 77 AQAARNIMEAH--RDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIH------EIGGVVIADEIQCGMGRSGSH--FWA 145 (284)
Q Consensus 77 ~~~l~~~i~~~--~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~------~~g~llI~DEv~tG~gr~G~~--~~a 145 (284)
.+.+++.++.. ....++++++ |.++..|.. ++.+.+++|.++|+ +||+++|+||+|++|++.|.. .+.
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 242 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS-IEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFF 242 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGG
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHH
Confidence 67777777632 1234467776 547777764 57777999999999 899999999999999876631 123
Q ss_pred ccccCCCCc---EE--Eeccccc-CCcceeEEEe---cHHHHHhchh------------------------h--------
Q psy11784 146 FQTQGAVPD---II--TVGKPMG-NGMPIGAVIT---SRKIAESLNC------------------------L-------- 184 (284)
Q Consensus 146 ~~~~g~~pD---iv--~~sK~l~-~G~p~gav~~---~~~i~~~~~~------------------------l-------- 184 (284)
....++.+| ++ ++||.++ .|+++|++++ ++++++.+.. +
T Consensus 243 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 322 (418)
T 3rq1_A 243 NKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKE 322 (418)
T ss_dssp GGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHH
Confidence 334456677 32 7899998 6899999999 8888776532 1
Q ss_pred ---------hhHHHHHHHHHHHHHhc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCC
Q psy11784 185 ---------DDNRPSGKYLVRPLGIN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAM 247 (284)
Q Consensus 185 ---------~~~~~~~~~l~~~L~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l 247 (284)
++++++.+++.+.|+++ .|+++++.+ ....++++.|.++||++.|+ ++.+||+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g---~~~iRis~~- 394 (418)
T 3rq1_A 323 YEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPT----DSANAICEELKKEHIYVIAL---ANGIRIAAC- 394 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEEC----TTHHHHHHHHHHTTEECEEC---SSEEEEEGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCC----CCHHHHHHHHHhCCEEEecC---CCCeEEEEe-
Confidence 12344455566666653 344444444 24567888899999999975 478999854
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q psy11784 248 CLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~ 268 (284)
.++++++++++++|.++++++
T Consensus 395 ~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 395 GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp GSCHHHHTTHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999875
No 107
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.78 E-value=1.1e-17 Score=154.58 Aligned_cols=238 Identities=9% Similarity=0.069 Sum_probs=156.1
Q ss_pred CcHHHHHHHHHHHccCCc--cEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQ--NIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~--~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
++|++.+++....+.... +|++...+||+....+...... +..+|..+ ..+. -..+
T Consensus 115 t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~-----------~~~v~~~~---~~~~--------~d~~ 172 (437)
T 3g0t_A 115 MQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQK-----------FESFDLFE---YRGE--------KLRE 172 (437)
T ss_dssp HHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCC-----------CEEEEGGG---GCTT--------HHHH
T ss_pred HHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCE-----------EEEEeecC---CCCc--------cCHH
Confidence 367777877765212234 7899999999876554432110 11222210 0010 1167
Q ss_pred HHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc-c-------ccccc-
Q psy11784 79 AARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH-F-------WAFQT- 148 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~-------~a~~~- 148 (284)
+|++.++ ..++.+|++ .| ++..|. ..+.+.+++|.++|++||+++|+||+|+++...+.. . .....
T Consensus 173 ~l~~~l~--~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T 3g0t_A 173 KLESYLQ--TGQFCSIIYSNP-NNPTWQ-CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANY 248 (437)
T ss_dssp HHHHHHT--TTCCCEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGT
T ss_pred HHHHHHh--cCCceEEEEeCC-CCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCC
Confidence 7888874 234556655 56 666776 457888999999999999999999999976543321 1 11111
Q ss_pred cCCCCcEEEeccccc-CCcceeEEEecHHHHH-h-----------------chh--------------------------
Q psy11784 149 QGAVPDIITVGKPMG-NGMPIGAVITSRKIAE-S-----------------LNC-------------------------- 183 (284)
Q Consensus 149 ~g~~pDiv~~sK~l~-~G~p~gav~~~~~i~~-~-----------------~~~-------------------------- 183 (284)
.+....+.+++|.++ .|+++|++++++++++ . +..
T Consensus 249 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 328 (437)
T 3g0t_A 249 TDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACND 328 (437)
T ss_dssp CSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHh
Confidence 222233557899999 7899999999999988 6 543
Q ss_pred --------hhhHHHHHHHHHHHHHhc----c-----------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCC--
Q psy11784 184 --------LDDNRPSGKYLVRPLGIN----L-----------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYG-- 238 (284)
Q Consensus 184 --------l~~~~~~~~~l~~~L~~~----~-----------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-- 238 (284)
.++++++.+++.+.|+++ . |.++++.+ + ......+++.|.++||++.++...+
T Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~L~~~gi~v~~~~~~~~~ 406 (437)
T 3g0t_A 329 GEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGY-K-GMDSSKLIEKFVRYGMCAITLKTTGSK 406 (437)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEE-T-TCCHHHHHHHHHHTTEECEESTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEec-C-CCCHHHHHHHHHHcCeEEeeccccCCC
Confidence 113445566677777653 1 23344444 2 2356789999999999999865322
Q ss_pred --CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 239 --NVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 239 --~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.+|++++.. |++++++++++|.+++++
T Consensus 407 ~~~~iRis~~~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 407 RNEAMRICTSLL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CTTCEEEECSSS-CGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 6799998844 999999999999988753
No 108
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.78 E-value=2e-18 Score=157.47 Aligned_cols=229 Identities=14% Similarity=0.082 Sum_probs=149.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.++++.+.+....+|++...+||+....+...... +..+|.... ..+.-+ .+++
T Consensus 104 ~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~--~~~~~d--------~~~l 162 (396)
T 2q7w_A 104 TGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLE-----------VREYAYYDA--ENHTLD--------FDAL 162 (396)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCE-----------EEEEECEET--TTTEEC--------HHHH
T ss_pred hhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCc-----------eEEEecccC--CCCCcC--------HHHH
Confidence 4789999998876656678999999999977655433211 112222100 001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc--CccccccccCCCCc----
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG--SHFWAFQTQGAVPD---- 154 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G--~~~~a~~~~g~~pD---- 154 (284)
++.++..+...+++++...++..|. .++.+++++|.++|++||+++|+||+|++|++.| . ++....+...+|
T Consensus 163 ~~~l~~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 163 INSLNEAQAGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEED-AEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHTTCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHH-THHHHHHHHHCSCEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccch-hHHHHHHHhcCCcEEE
Confidence 8888644334566666666666665 6789999999999999999999999999987654 2 233332222233
Q ss_pred EEEeccccc-CCcceeEEEe---cH----HHHHhchh--------------------hh-----------------hHHH
Q psy11784 155 IITVGKPMG-NGMPIGAVIT---SR----KIAESLNC--------------------LD-----------------DNRP 189 (284)
Q Consensus 155 iv~~sK~l~-~G~p~gav~~---~~----~i~~~~~~--------------------l~-----------------~~~~ 189 (284)
+.++||.++ .|+++|++++ ++ ++++.+.. ++ ++++
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 320 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred EEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence 447899999 7999999997 55 34443321 11 3345
Q ss_pred HHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHH
Q psy11784 190 SGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 190 ~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~ 257 (284)
+.+++.+.|+++ .|++.++.+. ...+.+.+.++||++.++ +|++++. .|+++++++
T Consensus 321 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gv~v~~~------~Ris~~~-~~~e~i~~~ 388 (396)
T 2q7w_A 321 MRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT-----KEQVLRLREEFGVYAVAS------GRVNVAG-MTPDNMAPL 388 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHHH
T ss_pred HHHHHHHHHHhcCCCCCcceecCCCceEEEecCC-----HHHHHHHHHhcCeeecCC------ceEEEee-cCHHHHHHH
Confidence 566666666652 1334333331 234556667899999852 5998875 399999999
Q ss_pred HHHHHHH
Q psy11784 258 VSTLNRI 264 (284)
Q Consensus 258 ~~~l~~~ 264 (284)
+++|+++
T Consensus 389 ~~~l~~~ 395 (396)
T 2q7w_A 389 CEAIVAV 395 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999875
No 109
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.78 E-value=2e-17 Score=152.05 Aligned_cols=239 Identities=13% Similarity=0.107 Sum_probs=152.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++... ....+|++...+||+....+.... .. +..+|.... ..+..| +++|
T Consensus 114 ~~al~~~~~~l~--~~gd~vl~~~p~y~~~~~~~~~~g-~~----------~~~v~~~~~--~~~~~d--------~~~l 170 (416)
T 1bw0_A 114 SHGILMAITAIC--DAGDYALVPQPGFPHYETVCKAYG-IG----------MHFYNCRPE--NDWEAD--------LDEI 170 (416)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEESCCTHHHHHHHHTT-CE----------EEEEEEEGG--GTTEEC--------HHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCcHhHHHHHHHcC-cE----------EEEeecCcc--cCCCCC--------HHHH
Confidence 357777777652 223679999999999765443221 11 111221100 001111 5677
Q ss_pred HHHHHhcCCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC----ccccccccCCCCc-
Q psy11784 81 RNIMEAHRDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS----HFWAFQTQGAVPD- 154 (284)
Q Consensus 81 ~~~i~~~~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~----~~~a~~~~g~~pD- 154 (284)
++.++ +++.+ ++++| ++..|. .+|++++++|.++|++||+++|+||+|++|.+.|. .+.....++..++
T Consensus 171 ~~~l~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 245 (416)
T 1bw0_A 171 RRLKD---DKTKLLIVTNP-SNPCGS-NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPR 245 (416)
T ss_dssp HHHCC---TTEEEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCE
T ss_pred HHHhc---cCCeEEEEeCC-CCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcE
Confidence 77664 34444 45666 566676 46899999999999999999999999998866553 1222222222222
Q ss_pred --EEEeccccc-CCcceeEEEecHH------HHHhch-----h--------------------------hhhHHHHHHHH
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRK------IAESLN-----C--------------------------LDDNRPSGKYL 194 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~------i~~~~~-----~--------------------------l~~~~~~~~~l 194 (284)
+.++||+++ .|+++|+++++++ +...+. . .++++++.+++
T Consensus 246 i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 325 (416)
T 1bw0_A 246 VILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYL 325 (416)
T ss_dssp EEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 347899986 5899999998763 321110 0 12455667777
Q ss_pred HHHHHhc---------cCceeEEEEecc----cHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHH
Q psy11784 195 VRPLGIN---------LHIFWCLILLSI----TYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 195 ~~~L~~~---------~G~~~~i~~~~~----~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~ 258 (284)
.+.|+++ .|.++++.+... ......+++.|+ ++||++.++..+ .+++|+++ ..+++++++++
T Consensus 326 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~~~e~l~~~l 403 (416)
T 1bw0_A 326 YNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TRPVEVYREAV 403 (416)
T ss_dssp HHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CSCHHHHHHHH
T ss_pred HHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cCCHHHHHHHH
Confidence 7777654 355666666311 124667888885 889999987543 47899987 46899999999
Q ss_pred HHHHHHHHHHh
Q psy11784 259 STLNRIFTSLQ 269 (284)
Q Consensus 259 ~~l~~~l~~~~ 269 (284)
++|.+++++..
T Consensus 404 ~~l~~~l~~~~ 414 (416)
T 1bw0_A 404 ERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHB
T ss_pred HHHHHHHHHhh
Confidence 99999987643
No 110
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.65 E-value=1.4e-20 Score=172.08 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=127.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---cccccc--cCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---FWAFQT--QGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~~a~~~--~g~ 151 (284)
.+.+++.++. .++++|+++..++..|.. ++++++++|.++|++||+++|+||+|++|++.|.. +++... .+.
T Consensus 153 ~~~l~~~l~~--~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 229 (392)
T 3b1d_A 153 FEQLENDIVE--NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDF 229 (392)
Confidence 5666666652 346778887667777764 67889999999999999999999999998776631 222222 445
Q ss_pred CCcEEEeccccc-CCcceeEEEecH-HHHHhchh---------------------h-----------hhHHHHHHHHHHH
Q psy11784 152 VPDIITVGKPMG-NGMPIGAVITSR-KIAESLNC---------------------L-----------DDNRPSGKYLVRP 197 (284)
Q Consensus 152 ~pDiv~~sK~l~-~G~p~gav~~~~-~i~~~~~~---------------------l-----------~~~~~~~~~l~~~ 197 (284)
.+++.++||+++ +|+++|++++++ ++++.+.. + +.++++.+++.+.
T Consensus 230 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 309 (392)
T 3b1d_A 230 ALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEY 309 (392)
Confidence 567789999998 789999999975 47765543 1 1233444555555
Q ss_pred HHh-c--------c-CceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 198 LGI-N--------L-HIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 198 L~~-~--------~-G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
|++ + . +++.++++........++++.|+ ++||++.++..+ .+++|+. +..+++++++++++|.
T Consensus 310 l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~e~i~~~l~~l~ 387 (392)
T 3b1d_A 310 FAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLN--IAAPKSLVEEICKRIV 387 (392)
Confidence 544 2 2 22334555211124567888887 789999986433 3678986 4457899999999998
Q ss_pred HHHH
Q psy11784 263 RIFT 266 (284)
Q Consensus 263 ~~l~ 266 (284)
++++
T Consensus 388 ~~l~ 391 (392)
T 3b1d_A 388 CCLP 391 (392)
Confidence 8764
No 111
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.78 E-value=4.1e-18 Score=154.70 Aligned_cols=227 Identities=13% Similarity=0.096 Sum_probs=157.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhc---CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD---ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+++..+ .....+|++...+||+....... ..+.. +..+|.+.. ..+..+ .
T Consensus 86 t~a~~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~--~~~~~d--------~ 144 (390)
T 1elu_A 86 TTGCDIVLWGLD-WHQGDEILLTDCEHPGIIAIVQAIAARFGIT----------YRFFPVAAT--LNQGDA--------A 144 (390)
T ss_dssp HHHHHHHHHHSC-CCTTCEEEEETTCCHHHHHHHHHHHHHHCCE----------EEEECCGGG--SSSSCH--------H
T ss_pred HHHHHHHHhCCC-CCCCCEEEEecCcccHHHHHHHHHHHHhCcE----------EEEEcCCCC--CCccch--------H
Confidence 467888887765 33456899999999997643211 11111 122332210 011111 5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHH----HhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIH----EIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~----~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
+.|++.+. +++++|++++.++..|.+.+ +++|.++|+ +||+++|+||+|+ +|.... . .....+
T Consensus 145 ~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~~---~--~~~~~~ 211 (390)
T 1elu_A 145 AVLANHLG---PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLPL---D--FSRLEV 211 (390)
T ss_dssp HHHHTTCC---TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBCC---C--TTTSCC
T ss_pred HHHHHhcC---CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcCC---C--hhhcCC
Confidence 66666553 46899999999999998877 999999999 9999999999997 554321 1 123457
Q ss_pred cEEE--ecccccCCcceeEEEecHHHHHhch-------------------------h-----------------------
Q psy11784 154 DIIT--VGKPMGNGMPIGAVITSRKIAESLN-------------------------C----------------------- 183 (284)
Q Consensus 154 Div~--~sK~l~~G~p~gav~~~~~i~~~~~-------------------------~----------------------- 183 (284)
|+++ ++|++.+|.++|++++++++++.+. .
T Consensus 212 d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~ 291 (390)
T 1elu_A 212 DYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR 291 (390)
T ss_dssp SEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH
Confidence 8886 8998888888999999988765431 1
Q ss_pred -------hhhHHHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEc
Q psy11784 184 -------LDDNRPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLP 245 (284)
Q Consensus 184 -------l~~~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p 245 (284)
.++.+++.+++.+.|+++ .|.++.+.+ +......++.+.|.++||++.++. ..+.+|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~~~-~~~~iRis~ 369 (390)
T 1elu_A 292 QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTV-DSPLGHRAIVQKLEEQRIYLRTIA-DPDCIRACC 369 (390)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEE-CSSSCHHHHHHHHHHTTEECEEET-TTTEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEc-CCCCCHHHHHHHHHHCCEEEEecC-CCCeEEEec
Confidence 124556667777777664 255666666 222346789999999999999864 357999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q psy11784 246 AMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~ 263 (284)
+...|++++++++++|++
T Consensus 370 ~~~~~~~~i~~~~~~l~~ 387 (390)
T 1elu_A 370 HYITDEEEINHLLARLAD 387 (390)
T ss_dssp CTTCCHHHHHHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHHh
Confidence 999999999999998864
No 112
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.77 E-value=1.8e-17 Score=151.19 Aligned_cols=230 Identities=18% Similarity=0.132 Sum_probs=158.9
Q ss_pred CcHHHHHHHHHHH--ccCCccEEEEcCCCcccchhhhcC---CCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARA--YTGRQNIVVVDAAYHGTVNLLLDI---SPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~--~~~r~~il~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|+|++.+++..++ .....+|++...+|||........ .+.. +..+|.+.. +..+
T Consensus 95 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~----~~~d------- 153 (406)
T 1kmj_A 95 TEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAE----------LRVIPLNPD----GTLQ------- 153 (406)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCE----------EEEECBCTT----SCBC-------
T ss_pred hHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCE----------EEEEecCCC----CCcC-------
Confidence 4789999998864 344578999999999976432211 1111 122332211 1111
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++|++.+. +++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+. |... +.... ..+|+
T Consensus 154 -~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~-g~~~---~~~~~--~~~d~ 219 (406)
T 1kmj_A 154 -LETLPTLFD---EKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQAV-MHHP---VDVQA--LDCDF 219 (406)
T ss_dssp -GGGHHHHCC---TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTT-TTSC---CCHHH--HTCSE
T ss_pred -HHHHHHHhc---cCCeEEEEeCCCccccCcCC----HHHHHHHHHHcCCEEEEEchhhc-CCCC---Ccccc--cCCCE
Confidence 456776664 46899999999999998877 99999999999999999999973 3321 22222 34788
Q ss_pred E--EecccccCCcceeEEEecHHHHHhch-------------------------------h-------------------
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRKIAESLN-------------------------------C------------------- 183 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~i~~~~~-------------------------------~------------------- 183 (284)
+ +++|.++. ..+|++++++++++.+. .
T Consensus 220 ~~~s~~K~~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 298 (406)
T 1kmj_A 220 YVFSGHKLYGP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALG 298 (406)
T ss_dssp EEEEGGGTTSC-TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEchhccCC-CCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcC
Confidence 6 58898842 23899999998876531 0
Q ss_pred ----hhhHHHHHHHHHHHHHhc----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CCC
Q psy11784 184 ----LDDNRPSGKYLVRPLGIN----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YGN 239 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~ 239 (284)
.++.+++.+++.+.|+++ .|.++.+.+ +. .....+.+.|.++||.+.++.. ..+
T Consensus 299 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~ 376 (406)
T 1kmj_A 299 LNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNL-GK-HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA 376 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEE-TT-CCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEE-CC-CCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCC
Confidence 113445666777777654 244555554 21 2356788899999999987642 147
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 240 VLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 240 ~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+|+.++..+|++|+++++++|+++++.+
T Consensus 377 ~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 377 MCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988764
No 113
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.77 E-value=1.3e-17 Score=153.48 Aligned_cols=231 Identities=14% Similarity=0.104 Sum_probs=155.1
Q ss_pred CcHHHHHHHHHHH-ccC-CccEEEEcCCCcccchhhhcC--CCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHH
Q psy11784 1 SEANDLALQLARA-YTG-RQNIVVVDAAYHGTVNLLLDI--SPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~-~~~-r~~il~~~~~yHG~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
++|++.|++..+. +++ ..+|++...+||+.......+ .+.. +..+|.... +..|
T Consensus 95 t~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d-------- 152 (423)
T 3lvm_A 95 TESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE----------VTYLAPQRN----GIID-------- 152 (423)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCE----------EEEECCCTT----SCCC--------
T ss_pred HHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCE----------EEEeccCCC----CccC--------
Confidence 4789999996654 443 578999999999865544322 1111 122332221 1111
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++|++.++ +++++|+++++++..|...+ +++|.++|++||++||+||+|++ |.. ........+|++
T Consensus 153 ~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~-----~~~~~~~~~di~ 219 (423)
T 3lvm_A 153 LKELEAAMR---DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV-GKL-----PIDLSQLKVDLM 219 (423)
T ss_dssp HHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT-TTS-----CCCTTTSCCSEE
T ss_pred HHHHHHhcC---CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc-CCC-----CcChhhcCCCEE
Confidence 577777765 46899999999999998877 99999999999999999999873 221 222233458998
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhchh--------------------------------------hhhHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLNC--------------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~~--------------------------------------l~~~~~~~~~l~~ 196 (284)
++| |.+ |+.++|++++++++.+.+.. .++.+++.+++.+
T Consensus 220 ~~s~sK~~-g~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 298 (423)
T 3lvm_A 220 SFSGHKIY-GPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWN 298 (423)
T ss_dssp EEESTTTT-SCSSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechHHhc-CCCCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766 954 34468999988665433211 2255566777777
Q ss_pred HHHhcc------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC---------------------CCEEEE
Q psy11784 197 PLGINL------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY---------------------GNVLLF 243 (284)
Q Consensus 197 ~L~~~~------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---------------------~~~lr~ 243 (284)
.|+++. +.++.+.+. ......+.+.|.+ +.+.++... .+.+|+
T Consensus 299 ~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 374 (423)
T 3lvm_A 299 GIKDIEEVYLNGDLEHGAPNILNVSFN--YVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRF 374 (423)
T ss_dssp HHTTSTTEEEESCSTTBCTTEEEEEET--TSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEE
T ss_pred HHhcCCCEEEeCCccccCCCeEEEEeC--CCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEE
Confidence 776641 234444442 2245667777766 666653210 378999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 244 LPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 244 ~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
.++..+|++++++++++|+++++++.+.
T Consensus 375 ~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 402 (423)
T 3lvm_A 375 SLGRFTTEEEIDYTIELVRKSIGRLRDL 402 (423)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999988653
No 114
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.77 E-value=6.9e-17 Score=147.45 Aligned_cols=220 Identities=14% Similarity=0.117 Sum_probs=145.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcC-CCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDI-SPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||++.|++.. .....+|+....+||+........ .... ..+..+|.. + .++
T Consensus 77 t~a~~~~~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~--------d---------~~~ 129 (386)
T 1cs1_A 77 MSAIHLVTTVF--LKPGDLLVAPHDCYGGSYRLFDSLAKRGC--------YRVLFVDQG--------D---------EQA 129 (386)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHHHTTTS--------CEEEEECTT--------C---------HHH
T ss_pred HHHHHHHHHHH--hCCCCEEEEecCCcHhHHHHHHHHHHhcC--------CEEEEeCCC--------C---------HHH
Confidence 46788888866 334567899999999854322111 1000 011223321 1 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--E
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--T 157 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~ 157 (284)
+++.++ +++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+++... . .. .+ .+|++ +
T Consensus 130 l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~-~-~~---~~--~~di~~~s 195 (386)
T 1cs1_A 130 LRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREVGAVSVVDNTFLSPALQ-N-PL---AL--GADLVLHS 195 (386)
T ss_dssp HHHHHH---TCCSEEEEECSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCTTTC-C-GG---GG--TCSEEEEE
T ss_pred HHHhhc---cCCcEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccccC-C-cc---cc--CceEEEEc
Confidence 888886 46889999999999998876 999999999999999999999976432 2 11 23 35655 7
Q ss_pred ecccccCC-cce-eEEEecH-HHHHhchh---------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 158 VGKPMGNG-MPI-GAVITSR-KIAESLNC---------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 158 ~sK~l~~G-~p~-gav~~~~-~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
++|+++++ .++ |++++++ ++++.+.. .++..++.+++.+.|+++
T Consensus 196 ~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~ 275 (386)
T 1cs1_A 196 CTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_dssp TTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 89999865 565 8898876 77766543 112333444455544432
Q ss_pred --------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec--C------------------------
Q psy11784 202 --------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE--G------------------------ 235 (284)
Q Consensus 202 --------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~--~------------------------ 235 (284)
.|.++.+.+. .. ...+.+.|.++||++... +
T Consensus 276 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~ 352 (386)
T 1cs1_A 276 YHPSLPENQGHEIAARQQKGFGAMLSFELD-GD--EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAA 352 (386)
T ss_dssp ECTTSTTSTTHHHHHHHCSSCCSEEEEEES-SC--HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHH
T ss_pred ECCCCCCCccHHHHHHhcCCCceEEEEEEC-CC--HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHh
Confidence 1667777774 21 456777888899988742 1
Q ss_pred --CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 236 --EYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 236 --~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
...+.+|+++++..++++++.+.+.|+++
T Consensus 353 ~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 353 AGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp HTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 12479999999977777777776666543
No 115
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.77 E-value=2.4e-17 Score=152.98 Aligned_cols=190 Identities=12% Similarity=0.107 Sum_probs=133.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc--ccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA--FQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a--~~~~g~~pD 154 (284)
.++|++.++...+++.+|++...++..|. +.|.+.+++|.++|++||+++|+||+|..+ ..+..+.. ....+...+
T Consensus 193 ~~~l~~~l~~~~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~ 270 (444)
T 3if2_A 193 FEALENLPALKEGRIGAICCSRPTNPTGN-VLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTIL 270 (444)
T ss_dssp HHHHHTCHHHHTTCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEE
T ss_pred HHHHHHHHHhcCCCceEEEeCCCCCCCCC-cCCHHHHHHHHHHHHHCCCEEEEECCCCCc-ccccccccccccCCCCEEE
Confidence 57777765433456777877655676776 557888999999999999999999999743 11110101 011233445
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh--------------------hh--------------hHHHHHHHHHHHHHh
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC--------------------LD--------------DNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l~--------------~~~~~~~~l~~~L~~ 200 (284)
+.++||.+..|+++|++++++++++.+.. ++ .++++.+++.+.|.+
T Consensus 271 ~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (444)
T 3if2_A 271 CFSLSKIGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQ 350 (444)
T ss_dssp EEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred EechhhccCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899986678999999999998877654 10 223344455555544
Q ss_pred c------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC------------CCEEEEEcCCCCCHHHHHH
Q psy11784 201 N------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY------------GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 201 ~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~------------~~~lr~~p~l~~t~~~id~ 256 (284)
. .|+++++.+.........+++.|.++||++.++..+ .+.+||+++. ++++|++
T Consensus 351 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~ 428 (444)
T 3if2_A 351 ALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLID 428 (444)
T ss_dssp HSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHH
T ss_pred hcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHH
Confidence 2 356667776321335678899999999999986542 1589999886 9999999
Q ss_pred HHHHHHHHHHHHhh
Q psy11784 257 IVSTLNRIFTSLQM 270 (284)
Q Consensus 257 ~~~~l~~~l~~~~~ 270 (284)
++++|.++++++.+
T Consensus 429 ~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 429 GIKVIGEVVRELYD 442 (444)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988754
No 116
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.76 E-value=1.3e-17 Score=153.21 Aligned_cols=178 Identities=10% Similarity=-0.010 Sum_probs=125.4
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc--cccCCCCcEEEecccccCCc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF--QTQGAVPDIITVGKPMGNGM 166 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~--~~~g~~pDiv~~sK~l~~G~ 166 (284)
+++.+|++...++..|. .+|.+.+++|.++|++||+++|+||+|..+ ..+..+... ...+....+.++||.+.+|+
T Consensus 179 ~~~~~v~~~~p~NptG~-~~~~~~~~~l~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~ 256 (417)
T 3g7q_A 179 EETGMICVSRPTNPTGN-VITDEELMKLDRLANQHNIPLVIDNAYGVP-FPGIIFSEARPLWNPNIILCMSLSKLGLPGS 256 (417)
T ss_dssp TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESGGGTCTTS
T ss_pred cCceEEEECCCCCCCCC-ccCHHHHHHHHHHHHHcCCEEEEeCCCccc-cccccccccccCCCCCEEEEEechhccCCCc
Confidence 45778888766777776 457788999999999999999999999743 111101010 11122233668999666789
Q ss_pred ceeEEEecHHHHHhchh--------------------h------h--------hHHHHHHHHHHHHHhc-----------
Q psy11784 167 PIGAVITSRKIAESLNC--------------------L------D--------DNRPSGKYLVRPLGIN----------- 201 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~--------------------l------~--------~~~~~~~~l~~~L~~~----------- 201 (284)
++|++++++++++.+.. + + +++++.+++.+.|++.
T Consensus 257 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 336 (417)
T 3g7q_A 257 RCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKP 336 (417)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECC
T ss_pred ceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCC
Confidence 99999999999887654 1 0 2234455566666542
Q ss_pred -cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----------GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|+++++++........++++.|.++||++.++..+ .+++||+++. ++++|++++++|.++++++.
T Consensus 337 ~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~ 414 (417)
T 3g7q_A 337 EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAW 414 (417)
T ss_dssp CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHH
Confidence 356666766321335678899999999999986432 4689999875 99999999999999998765
Q ss_pred h
Q psy11784 270 M 270 (284)
Q Consensus 270 ~ 270 (284)
+
T Consensus 415 ~ 415 (417)
T 3g7q_A 415 R 415 (417)
T ss_dssp H
T ss_pred h
Confidence 3
No 117
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.76 E-value=3e-17 Score=151.34 Aligned_cols=189 Identities=13% Similarity=0.039 Sum_probs=130.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecC-CCcccCChhHHHHHHHHH-HHhCCEEEEecccccCcccc-C-----ccccc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVV-HGAVVPPPGWLSLMYDYI-HEIGGVVIADEIQCGMGRSG-S-----HFWAF-- 146 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~-~G~~~~~~~~l~~l~~l~-~~~g~llI~DEv~tG~gr~G-~-----~~~a~-- 146 (284)
.++|++.+++ .+++++|++.|..++ .|. .++.+.+++|.++| ++||+++|+||+|+.+...+ . .++..
T Consensus 160 ~~~l~~~l~~-~~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 237 (423)
T 3ez1_A 160 VDAVERLAGT-DPSVKGILFVPTYSNPGGE-TISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLAR 237 (423)
T ss_dssp HHHHHHHHHS-CTTEEEEEECSSSCTTTCC-CCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHH
T ss_pred HHHHHHHHhh-CCCceEEEECCCCCCCCCc-CCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhh
Confidence 6788888852 346889988986554 555 56788899999999 99999999999998432222 1 01111
Q ss_pred --cccCCCCcEEEecccccCCcceeEEEecHHHHHhchh--------------------hhh--------HHH-------
Q psy11784 147 --QTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------LDD--------NRP------- 189 (284)
Q Consensus 147 --~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l~~--------~~~------- 189 (284)
+..+....+.++||.+.+|+++|++++++++++.+.. ++. +++
T Consensus 238 ~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 317 (423)
T 3ez1_A 238 DAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAP 317 (423)
T ss_dssp HHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 1223334466899997779999999999998877654 111 111
Q ss_pred HHHHHHHHHHh--------c------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-C-------CCCEEEEEcCC
Q psy11784 190 SGKYLVRPLGI--------N------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-E-------YGNVLLFLPAM 247 (284)
Q Consensus 190 ~~~~l~~~L~~--------~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~-------~~~~lr~~p~l 247 (284)
+.+.+.+.|.+ . .|+++++.+. .. ....+.+.|.++||++.+++ . ..+++||+++.
T Consensus 318 ~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~-~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~ 395 (423)
T 3ez1_A 318 KFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTA-EP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR 395 (423)
T ss_dssp HHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEES-SS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS
T ss_pred HHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECC-CC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC
Confidence 22222333322 1 3556777773 22 46678888999999999832 1 34799999876
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
. +++++++++++|.++++++..
T Consensus 396 ~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 396 P-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHHHHHH
Confidence 6 999999999999999988753
No 118
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.76 E-value=2.3e-17 Score=154.02 Aligned_cols=250 Identities=13% Similarity=0.058 Sum_probs=151.6
Q ss_pred CcHHHHHHHHHHHcc----C--C-ccEEEEcCCCcccchhhhcC-CCCcccccCCCCCceEEccCCCCcC--CCCCCCch
Q psy11784 1 SEANDLALQLARAYT----G--R-QNIVVVDAAYHGTVNLLLDI-SPRAFMLSSEKKPWVHVIPFPDTYR--GEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~~----~--r-~~il~~~~~yHG~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 70 (284)
|||++.|+++++..+ | | ..|+.. .||+.+...... .+..... +.. ..+.+.... ..+..|
T Consensus 99 t~A~~~al~~~~~~~~~~~G~~~~d~Ii~~--~~h~~t~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~d-- 168 (467)
T 2oqx_A 99 RGAEQIYIPVLIKKREQEKGLDRSKMVAFS--NYFFDTTQGHSQINGCTVRN--VYI----KEAFDTGVRYDFKGNFD-- 168 (467)
T ss_dssp CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE--SSCCHHHHHHHHHTTCEEEE--CBC----TTTTCTTSCCTTTTCBC--
T ss_pred HHHHHHHHHHHhccccccCCCCccceEEec--ccccccchhhhhccCcceee--ccc----cccccCCCCCCccCCcC--
Confidence 689999999998763 6 3 446664 699875433221 1111000 000 000110000 111112
Q ss_pred HHHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc----------Cccc
Q psy11784 71 QAAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG----------MGRS 139 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----------~gr~ 139 (284)
+++|++.++... +++++|++||+++.+|..+++.+++++|+++|++||++||+|++|.. .+..
T Consensus 169 ------~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~ 242 (467)
T 2oqx_A 169 ------LEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYK 242 (467)
T ss_dssp ------HHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGT
T ss_pred ------HHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhccccccccc
Confidence 678888887433 35899999999988656788999999999999999999999966542 1223
Q ss_pred cCc--cccccccCCCCcE--EEecccccCCccee-EEEecHH----HHHhchh---------------------------
Q psy11784 140 GSH--FWAFQTQGAVPDI--ITVGKPMGNGMPIG-AVITSRK----IAESLNC--------------------------- 183 (284)
Q Consensus 140 G~~--~~a~~~~g~~pDi--v~~sK~l~~G~p~g-av~~~~~----i~~~~~~--------------------------- 183 (284)
|.. .+..+.+ ..+|+ .+++|+++ +|+| +++++++ .++.+..
T Consensus 243 g~~~~~~~~~~~-~~~d~~~~s~sK~~g--~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~ 319 (467)
T 2oqx_A 243 DWTIEQITRETY-KYADMLAMSAKKDAM--VPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY 319 (467)
T ss_dssp TSCHHHHHHHHG-GGCSEEEEESSSTTC--CSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH
T ss_pred CccHHHHhhhhh-ccCCeEEEecccccC--CCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH
Confidence 321 1110000 11444 56789885 4544 4555544 2222110
Q ss_pred -------hhhHHHHHHHHHHHHHhc-------cCceeEEEEec------ccHH-HHHHHHHH-HHCCcEEeecCC-----
Q psy11784 184 -------LDDNRPSGKYLVRPLGIN-------LHIFWCLILLS------ITYY-LYRYTRRM-KEAKIIVANEGE----- 236 (284)
Q Consensus 184 -------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~~------~~~~-~~~~~~~l-~~~Gv~~~~~~~----- 236 (284)
+++..++++++.+.|+++ .|.++++.+.. .... ...+++.| .++||.+.+++.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~ 399 (467)
T 2oqx_A 320 DGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGR 399 (467)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTTCCEEEECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHCCCeeecCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccc
Confidence 112335666777777764 23344444421 0111 55678888 789999987542
Q ss_pred ----------CCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHh
Q psy11784 237 ----------YGNVLLFLPAMC-LTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 237 ----------~~~~lr~~p~l~-~t~~~id~~~~~l~~~l~~~~ 269 (284)
..+++||.++.. +|+++|++++++|+++++++.
T Consensus 400 ~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 400 DPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp CTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 127999999999 999999999999999998754
No 119
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.76 E-value=7.8e-17 Score=147.67 Aligned_cols=231 Identities=13% Similarity=0.084 Sum_probs=159.3
Q ss_pred CcHHHHHHHHHHH--ccCCccEEEEcCCCcccchhhhc---CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARA--YTGRQNIVVVDAAYHGTVNLLLD---ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~--~~~r~~il~~~~~yHG~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
++|++.+++..+. .....+|++...+||+....... ..+.. +..+|.++. +..+
T Consensus 100 t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d------- 158 (420)
T 1t3i_A 100 TEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAV----------LKFVQLDEQ----ESFD------- 158 (420)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCE----------EEEECBCTT----SSBC-------
T ss_pred HHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcE----------EEEeccCCC----CCcC-------
Confidence 4788999988852 34456899999999996532111 11111 122333211 1111
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++ +++++|++++.++..|...+ +++|.++|++||+++|+||+|+ +|... +....+ .+|+
T Consensus 159 -~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~---~~~~~~--~~di 224 (420)
T 1t3i_A 159 -LEHFKTLLS---EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS-APHYP---LDVQLI--DCDW 224 (420)
T ss_dssp -HHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC---CCHHHH--TCSE
T ss_pred -HHHHHHhhC---CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhc-cCCcc---Cchhhc--CCCE
Confidence 567777664 46899999999999998877 9999999999999999999997 33321 122233 3788
Q ss_pred EEec--ccccCCcceeEEEecHHHHHhch-----------------------------h---------------------
Q psy11784 156 ITVG--KPMGNGMPIGAVITSRKIAESLN-----------------------------C--------------------- 183 (284)
Q Consensus 156 v~~s--K~l~~G~p~gav~~~~~i~~~~~-----------------------------~--------------------- 183 (284)
+++| |.++ +.++|++++++++++.+. .
T Consensus 225 ~~~s~sK~~~-~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 303 (420)
T 1t3i_A 225 LVASGHKMCA-PTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGM 303 (420)
T ss_dssp EEEEGGGTTS-CTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCH
T ss_pred EEEehhhhcC-CCceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHH
Confidence 8766 9554 334899999998876431 0
Q ss_pred ---hhhHHHHHHHHHHHHHhc--------c------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------C
Q psy11784 184 ---LDDNRPSGKYLVRPLGIN--------L------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------Y 237 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~--------~------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------~ 237 (284)
.++.+++.+++.+.|+++ . |.++.+.+ +. ....++.+.|.++||.+.++.. +
T Consensus 304 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g 381 (420)
T 1t3i_A 304 ENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNV-AG-LHASDVATMVDQDGIAIRSGHHCTQPLHRLFD 381 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEE-TT-BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEE-CC-CCHHHHHHHHHHCCeEEeeccccchHHHHhcC
Confidence 113445666777777664 1 56666665 22 2356788899999999987621 1
Q ss_pred -CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 238 -GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 238 -~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.+|+.++..+|++|+++++++|+++++.+.
T Consensus 382 ~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 382 ASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp CCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 57899999988999999999999999988764
No 120
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.76 E-value=8.1e-17 Score=147.99 Aligned_cols=181 Identities=10% Similarity=0.100 Sum_probs=125.8
Q ss_pred HHHHHHHHHhc--CCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHH------HhCCEEEEecccccCccccCc--ccc
Q psy11784 77 AQAARNIMEAH--RDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIH------EIGGVVIADEIQCGMGRSGSH--FWA 145 (284)
Q Consensus 77 ~~~l~~~i~~~--~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~------~~g~llI~DEv~tG~gr~G~~--~~a 145 (284)
.++|++.++.. +...++++++ |.++..|.+ .+.+.+++|.++|+ +||+++|+||+|.+|++.|.. .+.
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 241 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYS-LSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFF 241 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHH
Confidence 57777777632 1234467777 447777864 57777999999999 899999999999999887741 122
Q ss_pred ccccCCCCcE---E--Eeccccc-CCcceeEEEe---cHHHHHhchh------------------------hh-------
Q psy11784 146 FQTQGAVPDI---I--TVGKPMG-NGMPIGAVIT---SRKIAESLNC------------------------LD------- 185 (284)
Q Consensus 146 ~~~~g~~pDi---v--~~sK~l~-~G~p~gav~~---~~~i~~~~~~------------------------l~------- 185 (284)
....++.+|+ + ++||.++ .|+++|++++ ++++++.+.. ++
T Consensus 242 ~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 321 (413)
T 3t18_A 242 EKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIY 321 (413)
T ss_dssp GGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHH
T ss_pred HHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHH
Confidence 3334556663 2 7899999 7999999999 8888776543 11
Q ss_pred ---------hHHHHHHHHHHHHHhc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCC
Q psy11784 186 ---------DNRPSGKYLVRPLGIN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMC 248 (284)
Q Consensus 186 ---------~~~~~~~~l~~~L~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~ 248 (284)
+++++.+++.+.|+++ .|++.++++ ....++++.|.++||++.++ ++++|++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gv~v~~g---~~~iRis~~~- 393 (413)
T 3t18_A 322 EQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPT----DKAFDIVKDLEKENIFTIPS---AKGIRVAICG- 393 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEEC----SCHHHHHHHHHHTTEECEEC---SSEEEECTTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCC----CCHHHHHHHHHhCCEEEecC---CCceEEEEee-
Confidence 1233344455555553 344444444 23567888899999999975 5789998774
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q psy11784 249 LTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+++++ +++|.++++++.
T Consensus 394 ~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 394 VGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp SCGGGH---HHHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHh
Confidence 455555 888888887764
No 121
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.76 E-value=3.8e-17 Score=149.68 Aligned_cols=231 Identities=10% Similarity=0.065 Sum_probs=158.2
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+|++.+++.. .....+|++...+||+.... .....+.. +..+|.+.. + .-| .+++
T Consensus 73 ~al~~~~~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~--~--~~d--------~~~l 128 (416)
T 3isl_A 73 AGIEAVLASV--IEPEDDVLIPIYGRFGYLLTEIAERYGAN----------VHMLECEWG--T--VFD--------PEDI 128 (416)
T ss_dssp HHHHHHHHHH--CCTTCEEEEEESSHHHHHHHHHHHHTTCE----------EEEEECCTT--C--CCC--------HHHH
T ss_pred HHHHHHHHHh--cCCCCEEEEecCCcccHHHHHHHHhcCCe----------eEEEecCCC--C--CCC--------HHHH
Confidence 6777777755 44567899999999984322 11111111 222333221 1 111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe--
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV-- 158 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~-- 158 (284)
++.+++ +++++|+++..++..|...+ +++|.++|++||+++|+||+|+ +|.. .+.... ..+|++++
T Consensus 129 ~~~i~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~---~~~~~~--~~~d~~~~s~ 196 (416)
T 3isl_A 129 IREIKK--VKPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVAT-IGGC---EVKVDE--WKIDAAIGGT 196 (416)
T ss_dssp HHHHHH--HCCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTT-TTTS---CCCTTT--TTCSEEECCS
T ss_pred HHHHhh--CCCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCcc-ccCC---Ccchhh--cCCCEEEecC
Confidence 888863 24688999999999998877 9999999999999999999997 3221 112222 34677765
Q ss_pred cccccCCcceeEEEecHHHHHhch---------------------------------------h----------------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLN---------------------------------------C---------------- 183 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~---------------------------------------~---------------- 183 (284)
+|++.++.++|++++++++++.+. .
T Consensus 197 ~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 276 (416)
T 3isl_A 197 QKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYAL 276 (416)
T ss_dssp SSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHH
T ss_pred ccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHH
Confidence 499888778999999988864432 0
Q ss_pred ---------------hhhHHHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecC-
Q psy11784 184 ---------------LDDNRPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEG- 235 (284)
Q Consensus 184 ---------------l~~~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~- 235 (284)
.++.+++.+++.+.|+++ .+.++.+.+ +......++.+.|.++ ||.+.++.
T Consensus 277 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gi~v~~g~~ 355 (416)
T 3isl_A 277 REGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEI-PGGIDGESVRDMLLAQFGIEIASSFG 355 (416)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCEECBCCCS
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeC-CCCCCHHHHHHHHHHhCCEEEecCCC
Confidence 224556677777777764 144555655 3333567899999887 99998753
Q ss_pred -CCCCEEEEEcCCCCCHHH-HHHHHHHHHHHHHHHh
Q psy11784 236 -EYGNVLLFLPAMCLTTEN-VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 236 -~~~~~lr~~p~l~~t~~~-id~~~~~l~~~l~~~~ 269 (284)
..++.+|+.++...+++| +++++++|+++++++.
T Consensus 356 ~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 356 PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 245799999966667666 9999999999998864
No 122
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.76 E-value=4.4e-17 Score=150.58 Aligned_cols=187 Identities=13% Similarity=0.055 Sum_probs=133.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecC-CCcccCChhHHHHHHHHH-HHhCCEEEEecccccC--ccccCc---cccc---
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVV-HGAVVPPPGWLSLMYDYI-HEIGGVVIADEIQCGM--GRSGSH---FWAF--- 146 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~-~G~~~~~~~~l~~l~~l~-~~~g~llI~DEv~tG~--gr~G~~---~~a~--- 146 (284)
.++|++.++ ..++.+|++.|..++ .|. ..|.+.+++|.++| ++||+++|+||+|+++ +..+.. .+..
T Consensus 169 ~~~l~~~l~--~~~~~~v~~~p~~~NPtG~-~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 245 (427)
T 3ppl_A 169 MDAVEELVK--NPQVKGMWVVPVFSNPTGF-TVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEA 245 (427)
T ss_dssp HHHHHHHTT--STTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHH
T ss_pred HHHHHHHHh--cCCCeEEEECCCCCCCCCc-cCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhc
Confidence 677777773 346889999986554 555 55778899999999 9999999999999984 333310 1111
Q ss_pred -cccCCCCcEEEecccccCCcceeEEEecHHHHHhchh--------------------h--------------hhHHHHH
Q psy11784 147 -QTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------L--------------DDNRPSG 191 (284)
Q Consensus 147 -~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l--------------~~~~~~~ 191 (284)
+..+....+.++||.+..|+++|++++++++++.+.. + +.++++.
T Consensus 246 ~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (427)
T 3ppl_A 246 AGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKF 325 (427)
T ss_dssp TTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Confidence 1234455567999997779999999999998877644 1 1223334
Q ss_pred HHHHHHHHh-------c------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC--------CCCCEEEEEcCCCCC
Q psy11784 192 KYLVRPLGI-------N------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG--------EYGNVLLFLPAMCLT 250 (284)
Q Consensus 192 ~~l~~~L~~-------~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~--------~~~~~lr~~p~l~~t 250 (284)
+.+.+.|.+ . .|+++++++. .. ....+.+.|.++||++.+++ ...+.+|++++.. +
T Consensus 326 ~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~-~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~ 402 (427)
T 3ppl_A 326 NKVLEILDSRLAEYGVAQWTVPAGGYFISLDVV-PG-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-P 402 (427)
T ss_dssp HHHHHHHHHHHGGGTCCEECCCSBSSCEEEECS-TT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-C
T ss_pred HHHHHHHHHhcCCCCceEEeCCCccEEEEEECC-cc-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-C
Confidence 444444433 1 4556677763 22 46778889999999999832 1357899988655 9
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy11784 251 TENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~~ 269 (284)
+++|++++++|.++++++.
T Consensus 403 ~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 403 VEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 123
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.75 E-value=9.8e-18 Score=153.71 Aligned_cols=177 Identities=13% Similarity=0.039 Sum_probs=124.3
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc----EEEeccccc-
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD----IITVGKPMG- 163 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD----iv~~sK~l~- 163 (284)
+++++|++++.++..|.+ +|.+.+++|.++|++||+++|+||+|++|++.|........++..+| +.++||.++
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 240 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF 240 (400)
T ss_dssp CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTT
T ss_pred cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCC
Confidence 357788887767777765 68999999999999999999999999988765531122222222234 568999998
Q ss_pred CCcceeEEEecHHH-------HHhchh------------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 164 NGMPIGAVITSRKI-------AESLNC------------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 164 ~G~p~gav~~~~~i-------~~~~~~------------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
.|+++|++++++++ ++.+.. .++++++.+++.+.|+++
T Consensus 241 ~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 320 (400)
T 3asa_A 241 AGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATGFEVF 320 (400)
T ss_dssp TTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHCCCeee
Confidence 78999999998776 443211 235667788888888764
Q ss_pred ---cCceeEEE-EecccHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 ---LHIFWCLI-LLSITYYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 ---~G~~~~i~-~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|.++++. + +......++++.|++ +||++.++..+ .+++|++ +..+++++++++++|.+++++..
T Consensus 321 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 321 GGEHAPYLWVKPT-QANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp ECSSSSEEEEECC-CTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCSCHHHHHHHHHHHHC------
T ss_pred CCCCceEEEEecc-CCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeCCHHHHHHHHHHHHHHHHhhh
Confidence 35566777 5 322234467777775 59999986432 4689997 57899999999999999987654
No 124
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.75 E-value=3.9e-17 Score=145.95 Aligned_cols=177 Identities=12% Similarity=0.092 Sum_probs=131.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++.. ++++|++++.++..|...+ +++|.++|++||+++|+||+| ++|... +....+ .+|++
T Consensus 113 ~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~-~~~~~~---~~~~~~--~~d~~ 180 (353)
T 2yrr_A 113 PEAVARALKRR--RYRMVALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVT-TLGMLP---FSMRAM--GVDYA 180 (353)
T ss_dssp HHHHHHHHHHS--CCSEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTT-TTTTSC---CCHHHH--TCSEE
T ss_pred HHHHHHHHHhC--CCCEEEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCc-cccccc---cccccc--CceEE
Confidence 67888888742 5778999999999998876 899999999999999999999 466542 222223 36887
Q ss_pred Ee--cccccCCcceeEEEecHHHHHhch-----------------h------------------------------hhhH
Q psy11784 157 TV--GKPMGNGMPIGAVITSRKIAESLN-----------------C------------------------------LDDN 187 (284)
Q Consensus 157 ~~--sK~l~~G~p~gav~~~~~i~~~~~-----------------~------------------------------l~~~ 187 (284)
++ +|+++++.++|++++++++++.+. . .++.
T Consensus 181 ~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 260 (353)
T 2yrr_A 181 FTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRA 260 (353)
T ss_dssp ECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred EecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 75 598887666899999999876543 1 1245
Q ss_pred HHHHHHHHHHHHhc----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHH
Q psy11784 188 RPSGKYLVRPLGIN----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 188 ~~~~~~l~~~L~~~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id 255 (284)
+++.+++.+.|+++ .+.++++.+ +......++.+.|.++||.+.++.. ..+.+|+.++...|++|++
T Consensus 261 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 339 (353)
T 2yrr_A 261 REVYAWVLEELKARGFRPYPKASPLPTVLVVRP-PEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAY 339 (353)
T ss_dssp HHHHHHHHHHHHHTTCEESCSSSBCTTEEEEEC-CTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHH
T ss_pred HHHHHHHHHHHHHCCCccccCccCCCeEEEEEC-CCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHH
Confidence 56677777777764 123345555 3223467899999999999987642 3478999998888999999
Q ss_pred -HHHHHHHHHHH
Q psy11784 256 -FIVSTLNRIFT 266 (284)
Q Consensus 256 -~~~~~l~~~l~ 266 (284)
+++++|+++++
T Consensus 340 ~~~~~~l~~~l~ 351 (353)
T 2yrr_A 340 QAFLKALDRALA 351 (353)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 99999998875
No 125
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.75 E-value=4.8e-17 Score=149.47 Aligned_cols=233 Identities=13% Similarity=0.105 Sum_probs=140.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCccc-chhhhc-CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGT-VNLLLD-ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~-t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|+|++.|++.. .....+|++...+||+. +.+... ..+.... ....+.... .+.-| .+
T Consensus 104 s~a~~~al~~~--~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~---~~~~d--------~~ 162 (425)
T 3ecd_A 104 AQANGAVMLAL--AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFN--------ALQYGVSRD---TMLID--------YD 162 (425)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEECC------------------CE--------EEEECCCTT---TSSCC--------HH
T ss_pred HHHHHHHHHHc--cCCCCEEEEcccccccceecchhhhhccccee--------eeecCCCcc---cCccC--------HH
Confidence 46788888766 33456788888888883 232221 1111100 111221100 01112 67
Q ss_pred HHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEE
Q psy11784 79 AARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv 156 (284)
+|++.+... ++++|+++ |..+ +...+++|+++|++||+++|+||+|. |+.+.|. ...... .+|++
T Consensus 163 ~l~~~i~~~--~~~~v~~~~~~~~-------~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~~~~~---~~di~ 229 (425)
T 3ecd_A 163 QVEALAQQH--KPSLIIAGFSAYP-------RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGR-HANPVE---HAHVV 229 (425)
T ss_dssp HHHHHHHHH--CCSEEEEECSCCC-------SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCGGG---TCSEE
T ss_pred HHHHHHhhc--CCcEEEEccccCC-------CcCCHHHHHHHHHHcCCEEEEECcChHhhhhccc-ccCchh---cCcEE
Confidence 888888632 36778887 5443 23448999999999999999999964 6555554 222111 16776
Q ss_pred E--ecccccCCcceeEEEec-HHHHHhchh---------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 157 T--VGKPMGNGMPIGAVITS-RKIAESLNC---------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 157 ~--~sK~l~~G~p~gav~~~-~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+ ++|+++ |.+.|+++++ +++.+.+.. .++++++.+++.+.|++
T Consensus 230 ~~s~sK~l~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (425)
T 3ecd_A 230 TSTTHKTLR-GPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA 308 (425)
T ss_dssp EEESSGGGC-CCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCcccC-CCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 4 569995 4567999987 456554332 23566677778888876
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC--------CCCCEEEEEcCCCC----CHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG--------EYGNVLLFLPAMCL----TTENVLFIVS 259 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~--------~~~~~lr~~p~l~~----t~~~id~~~~ 259 (284)
. .+.++++.+.+.......+.+.|.++||++.+.. ...+.+|+.++... ++++++++++
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~ 388 (425)
T 3ecd_A 309 GGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGR 388 (425)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred CCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHH
Confidence 4 2335555553222346678888889999998322 12358999966554 4999999999
Q ss_pred HHHHHHHHH
Q psy11784 260 TLNRIFTSL 268 (284)
Q Consensus 260 ~l~~~l~~~ 268 (284)
+|.+++++.
T Consensus 389 ~l~~~l~~~ 397 (425)
T 3ecd_A 389 LILEVFEAL 397 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999999876
No 126
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.75 E-value=1.2e-16 Score=143.43 Aligned_cols=231 Identities=15% Similarity=0.147 Sum_probs=153.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++..+. ...+|+..+..||+.+.. .....+.. +..+|.... ...| .++
T Consensus 66 t~a~~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 121 (366)
T 1m32_A 66 SYAVEAVLGSALG--PQDKVLIVSNGAYGARMVEMAGLMGIA----------HHAYDCGEV----ARPD--------VQA 121 (366)
T ss_dssp HHHHHHHHHHSCC--TTCCEEEEESSHHHHHHHHHHHHHTCC----------EEEEECCTT----SCCC--------HHH
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeCCCccHHHHHHHHHhCCc----------eEEEeCCCC----CCCC--------HHH
Confidence 4678888877642 335677788888885321 11111111 122333211 1111 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE--
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT-- 157 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~-- 157 (284)
|++.++.. .++.+|++....+..|.+.+ +++|.++|++||+++|+||+|+ +|... +... ...+|+++
T Consensus 122 l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~---~~~~--~~~~di~~~s 190 (366)
T 1m32_A 122 IDAILNAD-PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIP---MDIA--ALHIDYLISS 190 (366)
T ss_dssp HHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC---CCTT--TTTCSEEEEE
T ss_pred HHHHHhcC-CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcC---cccc--ccCccEEEec
Confidence 88888743 23566767666777788776 9999999999999999999997 44332 1222 22478874
Q ss_pred ecccccCCcceeEEEecHHHHHhch--------------------------h------------h-------------hh
Q psy11784 158 VGKPMGNGMPIGAVITSRKIAESLN--------------------------C------------L-------------DD 186 (284)
Q Consensus 158 ~sK~l~~G~p~gav~~~~~i~~~~~--------------------------~------------l-------------~~ 186 (284)
++|+++++.++|++++++++++.+. . + ++
T Consensus 191 ~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~ 270 (366)
T 1m32_A 191 ANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQR 270 (366)
T ss_dssp SSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred CcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHH
Confidence 6799987767899999998865320 0 1 13
Q ss_pred HHHHHHHHHHHHHhc-----------cCceeEEEEecc--cHHHHHHHHHHHHCCcEEeecCC-CCCEEEEEcCCCCCHH
Q psy11784 187 NRPSGKYLVRPLGIN-----------LHIFWCLILLSI--TYYLYRYTRRMKEAKIIVANEGE-YGNVLLFLPAMCLTTE 252 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~-~~~~lr~~p~l~~t~~ 252 (284)
++++.+++.+.|+++ .|.++++.+ +. .....++.+.|.++||++.++.. ..+.+|+.++..+|++
T Consensus 271 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~ 349 (366)
T 1m32_A 271 YQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYS-PEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAA 349 (366)
T ss_dssp HHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEEC-CCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHH
T ss_pred HHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEc-CccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHH
Confidence 345566677777653 134566665 32 23567899999999999987643 3579999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11784 253 NVLFIVSTLNRIFTS 267 (284)
Q Consensus 253 ~id~~~~~l~~~l~~ 267 (284)
++++++++|++++++
T Consensus 350 ~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 350 DITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999887643
No 127
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.74 E-value=6.4e-17 Score=146.03 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=122.8
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEeccccc-CCcceeE
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG-NGMPIGA 170 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~-~G~p~ga 170 (284)
.+++++..++..|.+.+ +++++++|+++|+++|+||+|++|+..+. ....+..+....+.+++|.++ +|+++|+
T Consensus 151 ~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 225 (360)
T 3hdo_A 151 KVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNA-LELVRRHENVVVTRTLSKSYSLAGMRIGL 225 (360)
T ss_dssp SEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCC-THHHHHCSSEEEEEESTTTTSCTTSCCEE
T ss_pred CEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcch-hHHhccCCCEEEEecchHhhcCCccceee
Confidence 36666666888888887 78899999999999999999998743332 222233444455668999997 6899999
Q ss_pred EEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEEEecccH
Q psy11784 171 VITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLILLSITY 215 (284)
Q Consensus 171 v~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~~~~~ 215 (284)
+++++++++.+.. .++++++.+++.+.|+++ .|.++++.+. ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~--~~ 303 (360)
T 3hdo_A 226 AIARPEVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIGYDVIPSQGNYLFATPP--DR 303 (360)
T ss_dssp EECCHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSEEEEECT--TC
T ss_pred EeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCCCccEEEEECC--CC
Confidence 9999999887654 225566677777777764 4556666552 23
Q ss_pred HHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 216 YLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 216 ~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
...++.+.|.++||++.+++. ..+++|++.+ +++|+|+++++|+++.+
T Consensus 304 ~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 304 DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 467888999999999987643 3478999854 89999999999887654
No 128
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.74 E-value=7.6e-17 Score=145.57 Aligned_cols=179 Identities=15% Similarity=0.099 Sum_probs=129.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc---cccCcccccc---ccC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG---RSGSHFWAFQ---TQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g---r~G~~~~a~~---~~g 150 (284)
.+++++.+. +++.+|+++..++..|.+. |.+.+++|.++| ++|+++|+||+|++|. ..+....... ..+
T Consensus 143 ~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 3get_A 143 FKKLYETHK---DEIKLIFLCLPNNPLGECL-DASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFD 217 (365)
T ss_dssp HHHHHHHTT---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCT
T ss_pred HHHHHHHhC---CCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCC
Confidence 667777665 5688888876677777654 666777777777 6799999999999775 2221011111 223
Q ss_pred CCCcEEEeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 151 AVPDIITVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 151 ~~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
....+.+++|.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 218 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 218 NVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp TEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3334458899998 78999999999999887654 225556677777777764
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+. .. ...++.+.|.++||++.++..+ .+.+|++++ +++|++++++.|++++
T Consensus 298 g~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 298 NIKIIDSYTNFITYFFD-EK-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp TCEECCCSSSEEEEECS-SS-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCeEEEEECC-CC-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 4566666663 22 5778999999999999986544 489999865 8999999999998875
No 129
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.74 E-value=1.7e-17 Score=149.72 Aligned_cols=231 Identities=13% Similarity=0.120 Sum_probs=161.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.|++.. .....+|++.+.+||+....+... +.. +..+|.+.... +.-| .++|
T Consensus 79 t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~-g~~----------~~~v~~~~~~~--~~~d--------~~~l 135 (371)
T 2e7j_A 79 REAKFAVMHSL--AKKDAWVVMDENCHYSSYVAAERA-GLN----------IALVPKTDYPD--YAIT--------PENF 135 (371)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHT-TCE----------EEEECCCCTTT--CCCC--------HHHH
T ss_pred HHHHHHHHHHH--hCCCCEEEEccCcchHHHHHHHHc-CCe----------EEEeecccCCC--CCcC--------HHHH
Confidence 47888888877 334568999999999977653221 111 22233111101 1112 6778
Q ss_pred HHHHHhcC--CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE-
Q psy11784 81 RNIMEAHR--DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT- 157 (284)
Q Consensus 81 ~~~i~~~~--~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~- 157 (284)
++.+++.. +++++|++++.++..|...+ +++|.++|++||+++|+||+|+.+ ..+ +....++ +|+++
T Consensus 136 ~~~l~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~~-~~~---~~~~~~~--~di~~~ 205 (371)
T 2e7j_A 136 AQTIEETKKRGEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAIG-RMP---VSLKEIG--ADFIVG 205 (371)
T ss_dssp HHHHHHHTTTSCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTBT-TBC---CCHHHHT--CSEEEE
T ss_pred HHHHHhhcccCCeEEEEEECCCCCCcccCC----HHHHHHHHHHcCCeEEEECccccC-CCC---CChhhcC--CCEEEe
Confidence 88886432 45889999999999998876 799999999999999999999853 332 1222333 67764
Q ss_pred -ecccccCCcceeEEEecHHHHHh-ch-------------h----------------------hhhH--HHHHHHHHHHH
Q psy11784 158 -VGKPMGNGMPIGAVITSRKIAES-LN-------------C----------------------LDDN--RPSGKYLVRPL 198 (284)
Q Consensus 158 -~sK~l~~G~p~gav~~~~~i~~~-~~-------------~----------------------l~~~--~~~~~~l~~~L 198 (284)
++|++++|.++|++++++++++. +. . .+++ +++.+++.+.|
T Consensus 206 s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L 285 (371)
T 2e7j_A 206 SGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEM 285 (371)
T ss_dssp EHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCCCcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999988899999999887654 21 1 1245 67778888888
Q ss_pred Hhc----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec-------CCCCCEEE-EEcCCC-CCHHHHHHHHH
Q psy11784 199 GIN----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE-------GEYGNVLL-FLPAMC-LTTENVLFIVS 259 (284)
Q Consensus 199 ~~~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~~~lr-~~p~l~-~t~~~id~~~~ 259 (284)
+++ .|.++++.+ + ...++.+.|.++||.+.+. +...+.+| +.++.. +|+++++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~ 361 (371)
T 2e7j_A 286 EKLGIKQLGDNPHNHDLMFFHA-E---VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLN 361 (371)
T ss_dssp HHTTCEEESSSSCCSSEEEEEC-H---HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHH
T ss_pred HHcCcEEecCCCccCceEEEEC-C---CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHH
Confidence 764 144555555 2 4677888999999998761 11157899 998887 89999999999
Q ss_pred HHHHHHHHH
Q psy11784 260 TLNRIFTSL 268 (284)
Q Consensus 260 ~l~~~l~~~ 268 (284)
+|+++++++
T Consensus 362 ~l~~~~~~~ 370 (371)
T 2e7j_A 362 AFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999988653
No 130
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.73 E-value=1.2e-16 Score=146.00 Aligned_cols=180 Identities=11% Similarity=0.094 Sum_probs=125.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-CCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-VPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~pDi 155 (284)
.+++++.++.. ++++|++.|. ..|.. ..+++|.++|++||++||+||+|+ +|+++.... ..++ .+|+
T Consensus 152 ~~~l~~~i~~~--~~~~v~~~~~--~~~~~----~~l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~~---~~~~~~~di 219 (405)
T 2vi8_A 152 YDDVREKARLH--RPKLIVAAAA--AYPRI----IDFAKFREIADEVGAYLMVDMAHI-AGLVAAGLH---PNPVPYAHF 219 (405)
T ss_dssp HHHHHHHHHHH--CCSEEEECCS--SCCSC----CCHHHHHHHHHHHTCEEEEECTTT-HHHHHTTSS---CCSTTTCSE
T ss_pred HHHHHHHHHhc--CCeEEEEeCC--CCCcc----CCHHHHHHHHHHcCCEEEEEcccc-ccccccCcC---CCccccCCE
Confidence 67788888632 3567777542 22322 238999999999999999999998 555443111 1222 4788
Q ss_pred E--EecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+ +++|+++|+.. |++++++++++.+.. .++++++++++.+.|++
T Consensus 220 ~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 298 (405)
T 2vi8_A 220 VTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN 298 (405)
T ss_dssp EEEESSSTTCCCSC-EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCCC-eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 7 78999986434 999999888765533 22556667778888876
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-------C-CCCEEEEEcCC----CCCHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------E-YGNVLLFLPAM----CLTTENVLFIVS 259 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~-~~~~lr~~p~l----~~t~~~id~~~~ 259 (284)
+ .+.++++.+.........+.+.|.++||++.++. + ..+.+|++++. .+++++++++++
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~ 378 (405)
T 2vi8_A 299 EGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAA 378 (405)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred CCCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHH
Confidence 4 2445566653111246678888999999998753 1 24689999987 679999999999
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
+|+++++++.
T Consensus 379 ~l~~~~~~~~ 388 (405)
T 2vi8_A 379 IIGLVLKNVG 388 (405)
T ss_dssp HHHHHHTCTT
T ss_pred HHHHHHhccc
Confidence 9999987664
No 131
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.73 E-value=4.8e-17 Score=145.87 Aligned_cols=231 Identities=11% Similarity=0.054 Sum_probs=149.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||++.|++.++. ...+|+..+.+||+.... .....+. .+..+|..+ +.-| .++
T Consensus 76 t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~----------~~~~v~~~~-----~~~d--------~~~ 130 (359)
T 1svv_A 76 TQTNLIACSLALR--PWEAVIATQLGHISTHETGAIEATGH----------KVVTAPCPD-----GKLR--------VAD 130 (359)
T ss_dssp HHHHHHHHHHHCC--TTEEEEEETTSHHHHSSTTHHHHTTC----------CEEEECCTT-----SCCC--------HHH
T ss_pred hHHHHHHHHHHhC--CCCEEEEcccchHHHHHHHHHhcCCC----------eeEEEeCCC-----Ceec--------HHH
Confidence 4788888888754 345789999999986553 1111111 122334321 1112 678
Q ss_pred HHHHHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC--ccccCccccccccC--C
Q psy11784 80 ARNIMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM--GRSGSHFWAFQTQG--A 151 (284)
Q Consensus 80 l~~~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~--gr~G~~~~a~~~~g--~ 151 (284)
|++.++.. +.++++|++++. +..|.+ .|.+++++|.++|++||+++|+||+|.+| |+.+. . ....+ .
T Consensus 131 l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~--~~~~~~~~ 205 (359)
T 1svv_A 131 IESALHENRSEHMVIPKLVYISNT-TEVGTQ-YTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-D--LTLADIAR 205 (359)
T ss_dssp HHHHHHHSCSTTSCEEEEEEEESS-CTTSCC-CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-C--CCHHHHHH
T ss_pred HHHHHHHHHhccCCCceEEEEEcC-CCCcee-cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-c--hhhhhhhh
Confidence 88888743 123889988887 566664 46799999999999999999999999765 44442 1 11111 2
Q ss_pred CCcEEEe--cccccCCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHH
Q psy11784 152 VPDIITV--GKPMGNGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 152 ~pDiv~~--sK~l~~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L 198 (284)
.+|++++ +|. ++.+..|++++++++++.+.. .++++++++++.+.|
T Consensus 206 ~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L 284 (359)
T 1svv_A 206 LTDMFYIGATKA-GGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL 284 (359)
T ss_dssp HCSEEEEECTTT-TCSSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEecccC-CCCCceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 4788765 574 333467888888776443321 235667777888888
Q ss_pred Hhc--------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 199 GIN--------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEG-EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 199 ~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+.. .+.++.+.+ + .++++.|+++ ||++.+.. ...+.+|+.+++.+|++++++++++|+++++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 285 EACGIRLAWPSASNQLFPIL-E-----NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp HHTTCCBSSCCSSSEECBEE-E-----HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ccCCeEEccCCccceEEEEc-C-----HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 321 122333333 1 3788899998 99985421 134689999999999999999999999887654
No 132
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.73 E-value=3.2e-16 Score=145.93 Aligned_cols=244 Identities=14% Similarity=0.069 Sum_probs=151.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCC-----CCc-CCCCCCCchHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP-----DTY-RGEFSADDPQAAQ 74 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~ 74 (284)
|+|++.|++.+. -.|. ++...+||+.+..+....+... ..++.. +.. .+.+.-|
T Consensus 100 t~a~~~al~~l~-~~gd---i~~~~~~~~~~~~~~~~~G~~~----------~~v~~~~~~~~~~~~~~~~~~d------ 159 (456)
T 2ez2_A 100 RGAENLLSQLAI-KPGQ---YVAGNMYFTTTRYHQEKNGAVF----------VDIVRDEAHDAGLNIAFKGDID------ 159 (456)
T ss_dssp HHHHHHHHHHHC-CTTC---EEEESSCCHHHHHHHHHTTCEE----------EECBCGGGGCTTCCCSCTTCBC------
T ss_pred HHHHHHHHHHhC-CCCC---EeccccccchhHHHHHHcCCEE----------EEecccccccccccccccCCCC------
Confidence 478888888772 2344 6778888887655443332211 112211 000 0012212
Q ss_pred HHHHHHHHHHHhcC-CCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc----------CccccCc
Q psy11784 75 KYAQAARNIMEAHR-DNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG----------MGRSGSH 142 (284)
Q Consensus 75 ~~~~~l~~~i~~~~-~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----------~gr~G~~ 142 (284)
.++|++.+.... ..+++|+++ |.++.+|. +.+.+++++|.++|++||+++|+||+|+. +.+.|.
T Consensus 160 --~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~- 235 (456)
T 2ez2_A 160 --LKKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENK- 235 (456)
T ss_dssp --HHHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTS-
T ss_pred --HHHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCc-
Confidence 678888887443 347899999 55557774 77899999999999999999999999984 445554
Q ss_pred ccc-c-cccCCCCcEEEec-ccccC-CcceeEEEe-cHHHHHhchh----------------------------------
Q psy11784 143 FWA-F-QTQGAVPDIITVG-KPMGN-GMPIGAVIT-SRKIAESLNC---------------------------------- 183 (284)
Q Consensus 143 ~~a-~-~~~g~~pDiv~~s-K~l~~-G~p~gav~~-~~~i~~~~~~---------------------------------- 183 (284)
.+. . +..+..+|++++| |.+++ | ..|++++ ++++++.+..
T Consensus 236 ~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~ 314 (456)
T 2ez2_A 236 SIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEY 314 (456)
T ss_dssp CHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHH
T ss_pred chhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhHHHH
Confidence 221 0 1223457988874 66644 3 3688877 5666543211
Q ss_pred hhhHHHHHHHHHHHHHhc--------cCceeEEEEec------ccHH-HHHHHHHH-HHCCcEEeecCC-----------
Q psy11784 184 LDDNRPSGKYLVRPLGIN--------LHIFWCLILLS------ITYY-LYRYTRRM-KEAKIIVANEGE----------- 236 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~--------~G~~~~i~~~~------~~~~-~~~~~~~l-~~~Gv~~~~~~~----------- 236 (284)
+++.+++.+++.+.|++. .|.++++.+.. .... ...+++.| .++||.+.+.+.
T Consensus 315 ~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~ 394 (456)
T 2ez2_A 315 IEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGE 394 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccc
Confidence 112333445666666652 34455555421 1112 44457777 578998755321
Q ss_pred ----CCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHh
Q psy11784 237 ----YGNVLLFLPAMC-LTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 237 ----~~~~lr~~p~l~-~t~~~id~~~~~l~~~l~~~~ 269 (284)
..+.+||++++. +|++++++++++|++++++..
T Consensus 395 ~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 395 HHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp BCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred cccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 137899999987 899999999999999988754
No 133
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.73 E-value=1.5e-16 Score=146.80 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=150.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.++++........+|+....+|++....+...... +..+|..+. ..+.-| .+.+
T Consensus 127 t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~-----------~~~v~~~~~--~~~~~d--------~~~l 185 (420)
T 4f4e_A 127 TGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFE-----------VVAYPYYDA--KTNGVN--------FDGM 185 (420)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCC-----------EEEEECEET--TTTEEC--------HHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCe-----------EEEeeeecc--ccCccC--------HHHH
Confidence 4788888887666655678999999999875544432211 112232100 001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-ccccccc-cCCCCc---E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQT-QGAVPD---I 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~-~g~~pD---i 155 (284)
++.+++.+++..++++...++..|. .++.+.+++|.++|++||+++|+||+|.+|+..|. ....... .+..++ +
T Consensus 186 ~~~l~~~~~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 264 (420)
T 4f4e_A 186 LAALNGYEPGTIVVLHACCHNPTGV-DLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVS 264 (420)
T ss_dssp HHHHTTCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEE
Confidence 8888755566888999888888886 45888999999999999999999999999866441 1122211 122233 3
Q ss_pred EEeccccc-CCcceeEEEe---cHHHHHh----chh-------------------------------------hhhHHHH
Q psy11784 156 ITVGKPMG-NGMPIGAVIT---SRKIAES----LNC-------------------------------------LDDNRPS 190 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~---~~~i~~~----~~~-------------------------------------l~~~~~~ 190 (284)
.++||.++ .|+++|++++ ++++++. +.. .++++++
T Consensus 265 ~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 344 (420)
T 4f4e_A 265 SSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAM 344 (420)
T ss_dssp EECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999 6999999864 4554332 110 1134555
Q ss_pred HHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 191 GKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 191 ~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
.+++.+.|+++ .|++.++.+. ...+.+.+.++||++.+++ |++++ .++++++++++
T Consensus 345 ~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~l~~~gI~v~~~~------Ris~~-~~~~~~i~~~~ 412 (420)
T 4f4e_A 345 RNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----SAQVDRLREEFGIYAVSTG------RICVA-ALNTRNLDVVA 412 (420)
T ss_dssp HHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----HHHHHHHHHHHCEECCTTS------EEEGG-GCCTTTHHHHH
T ss_pred HHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----HHHHHHHHHhCCEEecCCC------eEEEe-cCCHHHHHHHH
Confidence 66677777653 3444444331 2346666778899998632 78764 45888899999
Q ss_pred HHHHHHH
Q psy11784 259 STLNRIF 265 (284)
Q Consensus 259 ~~l~~~l 265 (284)
++|.+++
T Consensus 413 ~~l~~~l 419 (420)
T 4f4e_A 413 NAIAAVL 419 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 134
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.73 E-value=2.2e-16 Score=144.83 Aligned_cols=221 Identities=12% Similarity=0.071 Sum_probs=147.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.|++.. .....+|++...+|||........... ....+.++|.. + .+++
T Consensus 91 t~A~~~al~~~--~~~gd~Vi~~~~~y~~~~~~~~~~~~~-------~g~~~~~v~~~--------d---------~~~l 144 (392)
T 3qhx_A 91 MAAADCALRAM--LRPGDHVVIPDDAYGGTFRLIDKVFTG-------WNVEYTPVALA--------D---------LDAV 144 (392)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETTCCHHHHHHHHHTGGG-------GTCEEEEECTT--------C---------HHHH
T ss_pred HHHHHHHHHHH--hCCCCEEEEeCCCcchHHHHHHHHHHh-------cCcEEEEeCCC--------C---------HHHH
Confidence 47888888866 334567999999998865433211100 00012223321 1 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE--e
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT--V 158 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~--~ 158 (284)
++.++ +++++|++|++++..|.+.+ +++|.++|++||+++|+||+|+.+ . .....+..+|+++ +
T Consensus 145 ~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~g~~li~D~~~~~~-~------~~~~~~~~~di~~~S~ 210 (392)
T 3qhx_A 145 RAAIR---PTTRLIWVETPTNPLLSIAD----IAGIAQLGADSSAKVLVDNTFASP-A------LQQPLSLGADVVLHST 210 (392)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT-T------TCCGGGGTCSEEEEET
T ss_pred HHhhC---CCCeEEEEECCCCCCcEEec----HHHHHHHHHHcCCEEEEECCCccc-c------cCChHHhCCcEEEEcC
Confidence 77765 57999999999999998877 999999999999999999999732 1 1222345688887 8
Q ss_pred cccccC-C-cceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 159 GKPMGN-G-MPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 159 sK~l~~-G-~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
+|.+++ | ++.|+++++ +++++.+.. +++..++.+++.+.|++.
T Consensus 211 sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~ 290 (392)
T 3qhx_A 211 TKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVL 290 (392)
T ss_dssp TTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred ccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEE
Confidence 899997 4 688999987 577765543 234555666777777653
Q ss_pred -------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------------------CCCE
Q psy11784 202 -------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------------------YGNV 240 (284)
Q Consensus 202 -------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------------------~~~~ 240 (284)
.|.++++++......+..+...|...|+.+..++. ..+.
T Consensus 291 ~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~ 370 (392)
T 3qhx_A 291 YPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDL 370 (392)
T ss_dssp CTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTE
T ss_pred CCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCe
Confidence 17789999953335677788887766666543321 2467
Q ss_pred EEEEcCCCCCHHHHHHHHHHH
Q psy11784 241 LLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 241 lr~~p~l~~t~~~id~~~~~l 261 (284)
|||+.....++++|+.+.+.|
T Consensus 371 iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 371 VRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp EEEECCSSCHHHHHHHHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHHh
Confidence 888776655555555554443
No 135
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.73 E-value=2.4e-16 Score=145.64 Aligned_cols=187 Identities=11% Similarity=0.068 Sum_probs=133.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceec-CCCcccCChhHHHHHHHHHH-HhCCEEEEecccc--cCccccCccccc------
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFV-VHGAVVPPPGWLSLMYDYIH-EIGGVVIADEIQC--GMGRSGSHFWAF------ 146 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~-~~G~~~~~~~~l~~l~~l~~-~~g~llI~DEv~t--G~gr~G~~~~a~------ 146 (284)
++++++.+. ..++++|++.|.++ ..|. .+|.+++++|.++|+ +||+++|+||+|. +|+..|......
T Consensus 167 ~~~l~~~l~--~~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 243 (422)
T 3d6k_A 167 MGVVRELVK--DPQVKGMWTVPVFGNPTGV-TFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQA 243 (422)
T ss_dssp HHHHHHHHT--STTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHH
T ss_pred HHHHHHHHh--cCCCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhc
Confidence 677888775 23578888777655 4565 679999999999999 9999999999997 475544211122
Q ss_pred -cccCCCCcEEEecccccCCcceeEEEecHHHHHhchh--------------------hh-------hH-------HHHH
Q psy11784 147 -QTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------LD-------DN-------RPSG 191 (284)
Q Consensus 147 -~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l~-------~~-------~~~~ 191 (284)
+..+....+.+|||.++.|+++|++++++++++.+.. ++ ++ +++.
T Consensus 244 ~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (422)
T 3d6k_A 244 AGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKF 323 (422)
T ss_dssp TTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 1234455677899996678999999999998887654 11 12 2233
Q ss_pred HHHHHHHHh-------c------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-C-------CCEEEEEcCCCCC
Q psy11784 192 KYLVRPLGI-------N------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-Y-------GNVLLFLPAMCLT 250 (284)
Q Consensus 192 ~~l~~~L~~-------~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~-------~~~lr~~p~l~~t 250 (284)
+++.+.|++ + .|+++++.+. .. ....+.+.|.++||++.+++. + .+++|++++. .+
T Consensus 324 ~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~-~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~ 400 (422)
T 3d6k_A 324 ERVLEILDSRLSEYGVAKWTSPTGGYFISVDVV-PG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PP 400 (422)
T ss_dssp HHHHHHHHHHHGGGTCEEECCCSBSSCEEEEES-TT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SC
T ss_pred HHHHHHHHHhcCcCCceEEeCCCcceEEEEECC-CC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CC
Confidence 344455543 1 4566777773 22 356678888899999998432 2 4789998877 79
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy11784 251 TENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~~ 269 (284)
++++++++++|.++++++.
T Consensus 401 ~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 401 VAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 136
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.73 E-value=5.5e-16 Score=140.99 Aligned_cols=233 Identities=10% Similarity=0.041 Sum_probs=156.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhh-cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL-DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|+|++.+++.. .....+|+..+.+||+...... ...+.. +..+|.+.. + ..| .++
T Consensus 69 t~a~~~~~~~~--~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~--~--~~d--------~~~ 124 (392)
T 2z9v_A 69 VLGLEAAAASL--ISPDDVVLNLASGVYGKGFGYWAKRYSPH----------LLEIEVPYN--E--AID--------PQA 124 (392)
T ss_dssp HHHHHHHHHHH--CCTTCCEEEEESSHHHHHHHHHHHHHCSC----------EEEEECCTT--S--CCC--------HHH
T ss_pred hHHHHHHHHHh--cCCCCEEEEecCCcccHHHHHHHHHcCCc----------eEEeeCCCC--C--CCC--------HHH
Confidence 46778888776 3344678888889988631111 101111 222333211 1 111 677
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe-
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV- 158 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~- 158 (284)
+++.+++ .+++++|++++.++..|...+ +++|.++|++||+++|+||+|+ +|... +....+ .+|++++
T Consensus 125 l~~~l~~-~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~--~~d~~~~s 193 (392)
T 2z9v_A 125 VADMLKA-HPEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGMK---THPEDC--KADIYVTG 193 (392)
T ss_dssp HHHHHHH-CTTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBS---CCGGGG--TCSEEEEC
T ss_pred HHHHHhc-CCCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCcc---cccccc--cceEEEec
Confidence 8888863 235788999999999898776 8999999999999999999997 43221 222222 4788765
Q ss_pred -cccccCCcceeEEEecHHHHHhch---------------------h-------------------------------hh
Q psy11784 159 -GKPMGNGMPIGAVITSRKIAESLN---------------------C-------------------------------LD 185 (284)
Q Consensus 159 -sK~l~~G~p~gav~~~~~i~~~~~---------------------~-------------------------------l~ 185 (284)
+|+++++.++|++++++++++.+. . .+
T Consensus 194 ~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 273 (392)
T 2z9v_A 194 PNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWA 273 (392)
T ss_dssp SSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 699887666799999988765331 0 12
Q ss_pred hHHHHHHHHHHHHHhc-----c-------CceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEc-CCCC
Q psy11784 186 DNRPSGKYLVRPLGIN-----L-------HIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLP-AMCL 249 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~-----~-------G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p-~l~~ 249 (284)
+.+++.+++.+.|+++ . +.++.+.+ +......++.+.|.++ ||.+.++.. ..+.+|+.+ +..+
T Consensus 274 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~ 352 (392)
T 2z9v_A 274 RHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRT-PDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTA 352 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEEC-CCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccccc
Confidence 4455667777777653 1 23345554 2223467899999987 999987642 357999996 4378
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q psy11784 250 TTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~ 269 (284)
|++++++++++|+++++++.
T Consensus 353 ~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 353 QPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp SHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999998764
No 137
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.73 E-value=1.9e-16 Score=145.34 Aligned_cols=226 Identities=12% Similarity=0.070 Sum_probs=152.5
Q ss_pred CcHHHHHHHHHHHc----cCCccEEEEcCCCcccchhhhc-CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAY----TGRQNIVVVDAAYHGTVNLLLD-ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~----~~r~~il~~~~~yHG~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
++|++.|++.++.+ ....++|.....+|+.+..... .... .. .+. .+..+|.
T Consensus 98 t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~-~~--~g~--~~~~v~~------------------ 154 (416)
T 1qz9_A 98 SINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADM-LQ--QGY--TLRLVDS------------------ 154 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHH-HC--SSC--EEEEESS------------------
T ss_pred hHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHH-hc--CCc--eEEEeCc------------------
Confidence 36778888887643 3333566677788886543321 1000 00 000 1222332
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++|++.+. +++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ +|... +....+ .+|+
T Consensus 155 -~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~--~~d~ 220 (416)
T 1qz9_A 155 -PEELPQAID---QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVP---VDLHQA--GADY 220 (416)
T ss_dssp -GGGHHHHCS---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSC---CCHHHH--TCSE
T ss_pred -HHHHHHHhC---CCceEEEEeccccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcC---CChhhc--CCCE
Confidence 144555554 46889999999999998876 8999999999999999999997 54432 122222 3788
Q ss_pred EEec--ccccCCcce-eEEEecHHHHHhch--------------------------h-----------------------
Q psy11784 156 ITVG--KPMGNGMPI-GAVITSRKIAESLN--------------------------C----------------------- 183 (284)
Q Consensus 156 v~~s--K~l~~G~p~-gav~~~~~i~~~~~--------------------------~----------------------- 183 (284)
+++| |++++|.++ |++++++++++.+. .
T Consensus 221 ~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (416)
T 1qz9_A 221 AIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ 300 (416)
T ss_dssp EEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT
T ss_pred EEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHh
Confidence 8764 999888877 99999887643211 0
Q ss_pred ------hhhHHHHHHHHHHHHHhc-c---------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEE
Q psy11784 184 ------LDDNRPSGKYLVRPLGIN-L---------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVL 241 (284)
Q Consensus 184 ------l~~~~~~~~~l~~~L~~~-~---------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~l 241 (284)
.++++++++++.+.|+++ . +.++++.+ + ....+.+.|.++||++... ..+.+
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~l~~~gi~~~~~--~~~~l 374 (416)
T 1qz9_A 301 TDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEH-P---EGYAVIQALIDRGVIGDYR--EPRIM 374 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEEC-T---THHHHHHHHHTTTEECEEE--TTTEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEec-C---CHHHHHHHHHhCCcEeccC--CCCeE
Confidence 224566777777777652 1 23344444 2 2567899999999998653 35799
Q ss_pred EEEcC-CCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 242 LFLPA-MCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 242 r~~p~-l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
|+.++ +.+|++|+++++++|++++++..
T Consensus 375 Ris~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 375 RFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred EEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 99987 68899999999999999987653
No 138
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.72 E-value=2.2e-16 Score=142.79 Aligned_cols=231 Identities=12% Similarity=0.131 Sum_probs=154.6
Q ss_pred CcHHHHHHHHHHHc--cCCccEEEEcCCCcccchhhhc--CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHH
Q psy11784 1 SEANDLALQLARAY--TGRQNIVVVDAAYHGTVNLLLD--ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~--~~r~~il~~~~~yHG~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
++|++.+++..+.+ ....+|+....+||+....... ..+.. +..+|.... +..|
T Consensus 71 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d-------- 128 (384)
T 1eg5_A 71 TESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFK----------VKYVPVDSR----GVVK-------- 128 (384)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCE----------EEECCBCTT----SCBC--------
T ss_pred HHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCE----------EEEEccCCC----CccC--------
Confidence 47889999988742 3446799999999986554321 11111 112332211 1111
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC--CEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG--GVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.++|++.++ +++++|++++.++..|...+ +++|.++|++|| +++|+||+|+ ||... +... ...+|
T Consensus 129 ~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~~---~~~~--~~~~d 195 (384)
T 1eg5_A 129 LEELEKLVD---EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKIP---FSLE--KLEVD 195 (384)
T ss_dssp HHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTSC---CCCT--TTCCS
T ss_pred HHHHHHHhC---CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCcc---cCch--hcCCC
Confidence 567777664 46889999999998898877 899999999999 9999999997 65432 2222 23589
Q ss_pred EEEec--ccccC-CcceeEEEecHHH--HHhch--------h--------------------------hhhHHHHHHHHH
Q psy11784 155 IITVG--KPMGN-GMPIGAVITSRKI--AESLN--------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 155 iv~~s--K~l~~-G~p~gav~~~~~i--~~~~~--------~--------------------------l~~~~~~~~~l~ 195 (284)
++++| |.++. | +|++++++++ ...+. . .++++++.+++.
T Consensus 196 i~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 273 (384)
T 1eg5_A 196 YASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLV 273 (384)
T ss_dssp EEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 98777 97653 3 7999998875 32221 0 224556677777
Q ss_pred HHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC---------------------CCEEEE
Q psy11784 196 RPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY---------------------GNVLLF 243 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---------------------~~~lr~ 243 (284)
+.|++. .+.+..+.+ +. .....+.+.|.++||.+.++..+ .+.+|+
T Consensus 274 ~~L~~~g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 351 (384)
T 1eg5_A 274 SGLMNLGAHIITPLEISLPNTLSVSF-PN-IRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRI 351 (384)
T ss_dssp HHHHTTTCEECSCTTSBCTTEEEEEC-TT-CCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEE
T ss_pred HHhCCCCeEEeCCcccCCCCEEEEEe-CC-CCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEE
Confidence 777753 012334443 21 24567889999999999875321 368999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 244 LPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 244 ~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.++..+|++|+++++++|+++++++.+
T Consensus 352 ~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 352 SLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 988889999999999999999987743
No 139
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.72 E-value=4.3e-16 Score=141.74 Aligned_cols=233 Identities=14% Similarity=0.068 Sum_probs=156.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchh-hhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNL-LLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||++.|++.. .....+|++...+||+.... .....+. .+..+|.+.. ...| .++
T Consensus 80 t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~----------~~~~v~~~~~----~~~d--------~~~ 135 (393)
T 2huf_A 80 HGGMEATLCNL--LEDGDVILIGHTGHWGDRSADMATRYGA----------DVRVVKSKVG----QSLS--------LDE 135 (393)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESSHHHHHHHHHHHHTTC----------EEEEEECCTT----CCCC--------HHH
T ss_pred HHHHHHHHHHH--hCCCCEEEEECCCcchHHHHHHHHHcCC----------eeEEEeCCCC----CCCC--------HHH
Confidence 47888888876 23346799999999984211 1111111 1222333221 1111 677
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe-
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV- 158 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~- 158 (284)
+++.++.. ++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+ +|... +.... ..+|++++
T Consensus 136 l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~~---~~~~~--~~~d~~~~s 203 (393)
T 2huf_A 136 IRDALLIH--KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGAP---MFMDR--WEIDAMYTG 203 (393)
T ss_dssp HHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTBC---CCTTT--TTCSEEECC
T ss_pred HHHHHhcc--CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC---cchhh--cCccEEEEC
Confidence 88888631 4678899999999998776 8999999999999999999986 54321 22222 34788865
Q ss_pred -cccccCCcceeEEEecHHHHHhch-------------------------------h-----------------------
Q psy11784 159 -GKPMGNGMPIGAVITSRKIAESLN-------------------------------C----------------------- 183 (284)
Q Consensus 159 -sK~l~~G~p~gav~~~~~i~~~~~-------------------------------~----------------------- 183 (284)
+|+++|+.++|++++++++++.+. .
T Consensus 204 ~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 283 (393)
T 2huf_A 204 SQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPA 283 (393)
T ss_dssp SSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred CCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Confidence 499886555699999887765321 0
Q ss_pred -hhhHHHHHHHHHHHHHhc-------c----CceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEc-CC
Q psy11784 184 -LDDNRPSGKYLVRPLGIN-------L----HIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLP-AM 247 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~-------~----G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p-~l 247 (284)
.++.+++.+++.+.|+++ . +.++.+.+ +......++++.|+++ ||++.++.. ..+.+|+.+ +.
T Consensus 284 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~ 362 (393)
T 2huf_A 284 LIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKV-PQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQ 362 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEc-CCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccC
Confidence 124556677777777764 1 23455555 2223467888999865 999987542 357999998 66
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
..+++++++++++|+++++++..
T Consensus 363 ~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 363 NATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCC
Confidence 77899999999999999987743
No 140
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.71 E-value=4.6e-16 Score=141.88 Aligned_cols=230 Identities=14% Similarity=0.106 Sum_probs=147.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.++++........+|+....+|++....+..... . +..+|..+. ..+.-| .+++
T Consensus 105 ~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~-~----------~~~~~~~~~--~~~~~d--------~~~l 163 (397)
T 3fsl_A 105 SGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGF-E----------VSTYPWYDE--ATNGVR--------FNDL 163 (397)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTC-C----------EEEECCEET--TTTEEC--------HHHH
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCC-c----------eEEEeeeec--cCCcCc--------HHHH
Confidence 468888888776665667899999999987554443221 1 112332100 001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-ccccccc----cCCCCcE
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQT----QGAVPDI 155 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~----~g~~pDi 155 (284)
++.++++.++..++++...++..|. .++.+.+++|.++|++||+++|+||+|++|...+. ....... .+....+
T Consensus 164 ~~~l~~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (397)
T 3fsl_A 164 LATLKTLQAGSIVLLHPCCHNPTGA-DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVS 242 (397)
T ss_dssp HHHHTTCCTTCEEEECSSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEE
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEE
Confidence 8888755456778888877777776 56788899999999999999999999998865421 1112211 2222234
Q ss_pred EEeccccc-CCcceeEEEe---cHHHHHhchh-----------------------------------------hhhHHHH
Q psy11784 156 ITVGKPMG-NGMPIGAVIT---SRKIAESLNC-----------------------------------------LDDNRPS 190 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~---~~~i~~~~~~-----------------------------------------l~~~~~~ 190 (284)
.++||.++ .|+++|++++ ++++++.+.. .++++++
T Consensus 243 ~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 322 (397)
T 3fsl_A 243 NSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAM 322 (397)
T ss_dssp EECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999 7999999974 4444432110 1134455
Q ss_pred HHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 191 GKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 191 ~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
.+++.+.|+++ .|++.++.+. ...+.+.+.++||++.+++ |++++ .+++++|++++
T Consensus 323 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~gi~v~~g~------Ris~~-~~~~~~i~~~~ 390 (397)
T 3fsl_A 323 RQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-----AAQVDRLREEFGVYLIASG------RMCVA-GLNTANVQRVA 390 (397)
T ss_dssp HHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC-----HHHHHHHHHTTCEECCTTC------EEEGG-GCCTTTHHHHH
T ss_pred HHHHHHHHHhcCCCCCceeecCCceEEEecCCC-----HHHHHHHHHhCCEEECCCC------eEEEE-ecCHhhHHHHH
Confidence 66666666653 2334443331 2346666778899998643 78764 45788899999
Q ss_pred HHHHHH
Q psy11784 259 STLNRI 264 (284)
Q Consensus 259 ~~l~~~ 264 (284)
++|+++
T Consensus 391 ~~l~~~ 396 (397)
T 3fsl_A 391 KAFAAV 396 (397)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999875
No 141
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.71 E-value=1.2e-16 Score=143.36 Aligned_cols=178 Identities=13% Similarity=0.040 Sum_probs=121.3
Q ss_pred HHHHHH-HHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc--cccCcccccccc
Q psy11784 77 AQAARN-IMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG--RSGSHFWAFQTQ 149 (284)
Q Consensus 77 ~~~l~~-~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g--r~G~~~~a~~~~ 149 (284)
.++|++ .++.. +.++++|+++|.. +.|. ++|.+++++|.++|++||+++|+||+|..+. ..|. .....
T Consensus 123 ~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~ 197 (356)
T 1v72_A 123 IVRLRERTREKVGDVHTTQPACVSITQAT-EVGS-IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC---SPAEM 197 (356)
T ss_dssp HHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSC-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC---CTTTT
T ss_pred HHHHHHHhhhcchhhccCCceEEEEEcCC-CCCc-cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC---CHHHh
Confidence 677887 77531 1258999999954 5665 5789999999999999999999999997431 1121 11111
Q ss_pred C--CCCcEEE--ecccccCCccee--EEEecHHHHHhchh-------------------------------hhhHHHHHH
Q psy11784 150 G--AVPDIIT--VGKPMGNGMPIG--AVITSRKIAESLNC-------------------------------LDDNRPSGK 192 (284)
Q Consensus 150 g--~~pDiv~--~sK~l~~G~p~g--av~~~~~i~~~~~~-------------------------------l~~~~~~~~ 192 (284)
+ ...|+++ ++|+ |.|+| ++++++++++.+.. .++.+++++
T Consensus 198 ~~~~~~d~~~~s~sK~---g~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (356)
T 1v72_A 198 TWKAGVDALSFGATKN---GVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQ 274 (356)
T ss_dssp TGGGTCCEEEECCGGG---TCSSCEEEEESSGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred hhhhcCCEEEEecccC---CCcCccEEEEECHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 1 1356654 5787 34777 66678877664422 113455667
Q ss_pred HHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 193 YLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 193 ~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
++.+.|+++ .+.++++.+ + .++++.|.++||++.++....+.+|+.+++.+|++++++++++|++
T Consensus 275 ~l~~~L~~~~g~~~~~~~~~~~~~~~~-~-----~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 275 RLAQGLEGLGGVEVLGGTEANILFCRL-D-----SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp HHHHHHTTCTTEEEESCCCSSEEEEEE-C-----HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEccCCCccEEEEEc-C-----HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 777777653 222334443 1 2688889999999987542258999999999999999999999998
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
++++.
T Consensus 349 ~l~~~ 353 (356)
T 1v72_A 349 AADRT 353 (356)
T ss_dssp TC---
T ss_pred HHHhh
Confidence 87654
No 142
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.71 E-value=4.1e-16 Score=146.55 Aligned_cols=230 Identities=15% Similarity=0.106 Sum_probs=153.4
Q ss_pred CcHHHHHHHHHHHc---c----CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAY---T----GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~---~----~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
|+|+..|++++|.+ . +|.+||+.. .+|+.+..+....+.. +..+|.... +.-|
T Consensus 133 t~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~-~~h~~~~~~~~~~G~~----------vv~v~~~~~----~~~d----- 192 (474)
T 1wyu_B 133 AHGELTGILIIRAYHEDRGEGRTRRVVLVPD-SAHGSNPATASMAGYQ----------VREIPSGPE----GEVD----- 192 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTTCCEEEEET-TSCTHHHHHHHHTTCE----------EEEECBCTT----SSBC-----
T ss_pred HHHHHHHHHHHHHHHHhcCCccCCCEEEEeC-CcChhhHHHHHHCCCE----------EEEecCCCC----CCcC-----
Confidence 47889999999865 2 345677655 7888776554433221 222333211 1112
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
+++|++.+. +++++|++++. +..|.+. +.+++|.++|++||+++|+||+|..+ ..|. .....+ .+
T Consensus 193 ---~~~L~~~i~---~~t~~v~~~~p-n~~G~~~---~~l~~i~~l~~~~g~~li~Dea~~~~-~~g~--~~~~~~--g~ 257 (474)
T 1wyu_B 193 ---LEALKRELG---PHVAALMLTNP-NTLGLFE---RRILEISRLCKEAGVQLYYDGANLNA-IMGW--ARPGDM--GF 257 (474)
T ss_dssp ---HHHHHHHCS---TTEEEEEECSS-CTTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGG-TTTT--CCHHHH--TC
T ss_pred ---HHHHHHhhC---CCceEEEEECC-CCCcccC---CCHHHHHHHHHHcCCEEEEeCchhhh-hccC--CCcccC--CC
Confidence 677887774 46899999873 4567652 34999999999999999999999632 2332 111222 38
Q ss_pred cEEEe--cccccC-----CcceeEEEecHHHHHhch----------------------h---------------------
Q psy11784 154 DIITV--GKPMGN-----GMPIGAVITSRKIAESLN----------------------C--------------------- 183 (284)
Q Consensus 154 Div~~--sK~l~~-----G~p~gav~~~~~i~~~~~----------------------~--------------------- 183 (284)
|++++ +|++++ |.++|++++++++++.+. .
T Consensus 258 di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 258 DVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp SEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHH
Confidence 99887 798863 368999999988765442 0
Q ss_pred --------hhhHHHHHHHHHHHHHhccCc--------e--eEEEEecccHHHHHHHHHHHHCCcEEeecCC---CCCEEE
Q psy11784 184 --------LDDNRPSGKYLVRPLGINLHI--------F--WCLILLSITYYLYRYTRRMKEAKIIVANEGE---YGNVLL 242 (284)
Q Consensus 184 --------l~~~~~~~~~l~~~L~~~~G~--------~--~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr 242 (284)
.++..++++++.+.|+++ |+ + +.+.+ +.......+++.|.++||++..... ..+.+|
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lR 415 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFPLIVKEALM 415 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCccccccccccccCCEEE
Confidence 124556677788888764 22 1 22222 2223567899999999998632211 247899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.++..+|++++++++++|++++++
T Consensus 416 is~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 416 VEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EEeecCCCHHHHHHHHHHHHHHHHh
Confidence 9999989999999999999988754
No 143
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.71 E-value=3e-16 Score=143.91 Aligned_cols=179 Identities=13% Similarity=0.163 Sum_probs=122.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pD 154 (284)
.++|++.++.. ++++|+++ |.. |...+ +++|+++|++||++||+||+|+ |+.+.|. +... .. .+|
T Consensus 158 ~~~l~~~i~~~--~~~~v~~~~~~~---~~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~~--~~-~~d 224 (420)
T 3gbx_A 158 YDEMAKLAKEH--KPKMIIGGFSAY---SGVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPNP--VP-HAH 224 (420)
T ss_dssp HHHHHHHHHHH--CCSEEEECCTTC---CSCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCCS--TT-TSS
T ss_pred HHHHHHHHHhc--CCeEEEEecCcc---CCccC----HHHHHHHHHHcCCEEEEECCcchhceeccc-CCcc--cc-cCC
Confidence 67888888742 36777874 544 33333 9999999999999999999985 6555554 2211 11 289
Q ss_pred EEE--ecccccCCcceeEEEecH---HHHHhchh---------------------------------hhhHHHHHHHHHH
Q psy11784 155 IIT--VGKPMGNGMPIGAVITSR---KIAESLNC---------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 155 iv~--~sK~l~~G~p~gav~~~~---~i~~~~~~---------------------------------l~~~~~~~~~l~~ 196 (284)
+++ ++|+++ |.+.|++++++ ++++.+.. .+++.++.+++.+
T Consensus 225 i~~~s~sK~~~-g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (420)
T 3gbx_A 225 VVTTTTHKTLA-GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE 303 (420)
T ss_dssp EEEEESSGGGC-SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecccCCC-CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Confidence 987 669997 43458888887 66654432 2256667777888
Q ss_pred HHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEee-------cCC-CCCEEEEEcCCC----CCHHHHH
Q psy11784 197 PLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVAN-------EGE-YGNVLLFLPAMC----LTTENVL 255 (284)
Q Consensus 197 ~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~-------~~~-~~~~lr~~p~l~----~t~~~id 255 (284)
.|++. .+.++++.+.+.......+.+.|.++||++.+ +.+ ..+.+|+.++.. +++++++
T Consensus 304 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~ 383 (420)
T 3gbx_A 304 VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVK 383 (420)
T ss_dssp HHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHH
T ss_pred HHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHH
Confidence 88764 13345555532223466778888899999987 222 235699998876 5689999
Q ss_pred HHHHHHHHHHHHHh
Q psy11784 256 FIVSTLNRIFTSLQ 269 (284)
Q Consensus 256 ~~~~~l~~~l~~~~ 269 (284)
+++++|++++++..
T Consensus 384 ~~~~~l~~~l~~~~ 397 (420)
T 3gbx_A 384 ELAGWMCDVLDNIN 397 (420)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999987643
No 144
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.71 E-value=5.9e-16 Score=143.12 Aligned_cols=171 Identities=9% Similarity=0.116 Sum_probs=121.4
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc----CCCCcEEEeccccc-
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ----GAVPDIITVGKPMG- 163 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~----g~~pDiv~~sK~l~- 163 (284)
+++.+|++...++..|. +++.+.+++|.++|++||+++|+||+|++|...+. ......+ +....+.++||+++
T Consensus 197 ~~~~~v~l~~p~NPtG~-~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~ 274 (432)
T 3ei9_A 197 GRTDIIFFCSPNNPTGA-AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGAEEVAMETASFSNYAGF 274 (432)
T ss_dssp CCCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTGGGTEEEEEESHHHHCT
T ss_pred CCCCEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCCCCeEEEEecchhccCC
Confidence 34667777666776776 55888999999999999999999999998754443 2222222 22233558999998
Q ss_pred CCcceeEEEecHHH--------HHhchh--------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 164 NGMPIGAVITSRKI--------AESLNC--------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 164 ~G~p~gav~~~~~i--------~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
.|+++|++++++++ .+.+.. .++++++.+++.+.|+++
T Consensus 275 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 354 (432)
T 3ei9_A 275 TGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGY 354 (432)
T ss_dssp TTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 79999999998876 444332 124556667777777764
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+ + .....++++.|++ +||++.++.. ..+++|++ +..++++|++++++|++.-
T Consensus 355 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 355 DVYGGKNAPYVWVHF-P-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFGHRENILEACRRFKQLY 425 (432)
T ss_dssp CEEECSSSSEEEEEC-T-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHH
T ss_pred eecCCCcceEEEEEC-C-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHh
Confidence 344556665 2 2345677787776 4999998643 24789997 5679999999999997653
No 145
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.71 E-value=7.9e-16 Score=140.12 Aligned_cols=233 Identities=12% Similarity=0.103 Sum_probs=156.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccch-hhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN-LLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||++.+++.. .....+|+..+.+|++... ......+.. +..+|.+.. +..| .++
T Consensus 79 t~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~----~~~d--------~~~ 134 (396)
T 2ch1_A 79 HAGMEAMLSNL--LEEGDRVLIAVNGIWAERAVEMSERYGAD----------VRTIEGPPD----RPFS--------LET 134 (396)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEEESSHHHHHHHHHHHHTTCE----------EEEEECCTT----SCCC--------HHH
T ss_pred HHHHHHHHHHh--cCCCCeEEEEcCCcccHHHHHHHHHcCCc----------eEEecCCCC----CCCC--------HHH
Confidence 46777777766 2334678999999998531 111111111 222333221 1112 677
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.++.. ++++|++++..+..|.+.+ +++|.++|++||+++|+||+|+ +|... +... ...+|+++.|
T Consensus 135 l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~~---~~~~--~~~~d~~~~s 202 (396)
T 2ch1_A 135 LARAIELH--QPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGVP---FYMD--KWEIDAVYTG 202 (396)
T ss_dssp HHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTBC---CCTT--TTTCCEEECC
T ss_pred HHHHHHhC--CCCEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCCc---cchh--hcCcCEEEEc
Confidence 88888632 4678899988888898776 8999999999999999999997 55321 2222 2347888766
Q ss_pred --ccccCCcceeEEEecHHHHHhch--------------------------h----------------------------
Q psy11784 160 --KPMGNGMPIGAVITSRKIAESLN--------------------------C---------------------------- 183 (284)
Q Consensus 160 --K~l~~G~p~gav~~~~~i~~~~~--------------------------~---------------------------- 183 (284)
|.++++.++|++++++++++.+. .
T Consensus 203 ~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 282 (396)
T 2ch1_A 203 AQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLEN 282 (396)
T ss_dssp CC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred CCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHH
Confidence 99987767799999887765420 0
Q ss_pred -hhhHHHHHHHHHHHHHhc-------cC-----ceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEc-C
Q psy11784 184 -LDDNRPSGKYLVRPLGIN-------LH-----IFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLP-A 246 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~-------~G-----~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p-~ 246 (284)
.++.+++.+++.+.|+++ .+ .++.+.+ +......++.+.|+++ ||.+.++.. ..+.+|+.+ +
T Consensus 283 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~ 361 (396)
T 2ch1_A 283 QIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMI-PKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMG 361 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCG
T ss_pred HHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEc-CCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCC
Confidence 224556677777777764 11 2445554 3233467899999875 999987532 357899998 6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
++++++++++++++|+++++++..
T Consensus 362 ~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 362 ECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp GGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHHHHHHhCc
Confidence 788999999999999999988753
No 146
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.71 E-value=5.1e-16 Score=142.34 Aligned_cols=220 Identities=13% Similarity=0.065 Sum_probs=145.9
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhh---cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL---DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
+|++.|++... ....+|++...+||+...... ...+. .+..+|.. + .+
T Consensus 90 ~a~~~~l~~~~--~~gd~vi~~~~~~~~~~~~~~~~~~~~g~----------~~~~v~~~--------d---------~~ 140 (398)
T 2rfv_A 90 SAITTTLLTLC--QQGDHIVSASAIYGCTHAFLSHSMPKFGI----------NVRFVDAA--------K---------PE 140 (398)
T ss_dssp HHHHHHHHHHC--CTTCEEEEESSSCHHHHHHHHTHHHHTTC----------EEEEECTT--------S---------HH
T ss_pred HHHHHHHHHHh--CCCCEEEEcCCCcccHHHHHHHHHHHcCC----------EEEEeCCC--------C---------HH
Confidence 67777777652 234678888888888654431 11111 01223321 1 57
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE--E
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI--I 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi--v 156 (284)
++++.++ +++++|++|+.++..|.+.+ +++|.++|++||+++|+||+|+.+ ..+. .. .++ +|+ .
T Consensus 141 ~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~-~~~~-~~---~~~--~di~~~ 206 (398)
T 2rfv_A 141 EIRAAMR---PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSP-YCQQ-PL---QLG--ADIVVH 206 (398)
T ss_dssp HHHHHCC---TTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCT-TTCC-GG---GGT--CSEEEE
T ss_pred HHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc-ccCC-ch---hhC--CcEEEE
Confidence 7777664 46899999999999998876 999999999999999999999733 2232 22 233 565 5
Q ss_pred EecccccC-Ccce-eEEEecHHHHH-hchh----------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 TVGKPMGN-GMPI-GAVITSRKIAE-SLNC----------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 ~~sK~l~~-G~p~-gav~~~~~i~~-~~~~----------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+++|.+++ |.|+ |++++++++++ .+.. +++..++.+++.+.|++.
T Consensus 207 s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~ 286 (398)
T 2rfv_A 207 SVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSIT 286 (398)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred eCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 78999976 6888 99999988765 3221 123344555556666541
Q ss_pred ----------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----------------------
Q psy11784 202 ----------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------------------- 236 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------------------- 236 (284)
.|.++++++.........+.+.+...|+.+.+++.
T Consensus 287 ~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~ 366 (398)
T 2rfv_A 287 RVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKA 366 (398)
T ss_dssp EEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHT
T ss_pred EEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence 26778887742223445565555555776655421
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 237 --YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 237 --~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
..+.+|++++...++++++.+++.|+++
T Consensus 367 g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 367 GITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1479999999999999999988888653
No 147
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.70 E-value=9.3e-16 Score=139.81 Aligned_cols=183 Identities=16% Similarity=0.154 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI- 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi- 155 (284)
.+++++.+. +++.+|++...++..|. ..|++.+++|.++|++||+++|+||+|..+...|. ......+.-..++
T Consensus 154 ~~~l~~~l~---~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~i~ 228 (385)
T 1b5p_A 154 PERVRRAIT---PRTKALVVNSPNNPTGA-VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-HFSPGRVAPEHTLT 228 (385)
T ss_dssp HHHHHTTCC---TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGGGTCTTTEEE
T ss_pred HHHHHHhcC---CCCEEEEEeCCCCCCCC-CcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCCHHHcCCCCEEE
Confidence 566666554 34666665433555565 45889999999999999999999999997744332 2222222112233
Q ss_pred -EEeccccc-CCcceeEEEecHHHHHhchh--------------------hh--------------hHHHHHHHHHHHHH
Q psy11784 156 -ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------LD--------------DNRPSGKYLVRPLG 199 (284)
Q Consensus 156 -v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l~--------------~~~~~~~~l~~~L~ 199 (284)
.++||.++ .|+++|++++++++++.+.. ++ +++++.+++.+.|+
T Consensus 229 ~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 308 (385)
T 1b5p_A 229 VNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLT 308 (385)
T ss_dssp EEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899998 68999999999988776543 21 22233445555555
Q ss_pred hc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 200 IN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 200 ~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++ .|++.++.+........++++.|.++||.+.++..+ .+.+|++.. .+++++++++++|.++++
T Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 309 ALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG 383 (385)
T ss_dssp HHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred HCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 43 223444444211224677889999999999986543 378999754 799999999999877654
No 148
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.70 E-value=3.3e-16 Score=143.85 Aligned_cols=232 Identities=12% Similarity=0.088 Sum_probs=146.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.++++++.+....+|+....+||+....+.... .. +..+|..+. ..+..| .+++
T Consensus 108 ~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g-~~----------~~~v~~~~~--~~~~~d--------~~~l 166 (412)
T 1yaa_A 108 TGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQG-LK----------TATYPYWAN--ETKSLD--------LNGF 166 (412)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTT-CC----------EEEEECEET--TTTEEC--------HHHH
T ss_pred HhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcC-ce----------EEEEeeecC--CCCccC--------HHHH
Confidence 36888888887776555789999999999765443321 11 112232000 001111 6778
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc---Cccccccc-cCCCC---
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG---SHFWAFQT-QGAVP--- 153 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~~a~~~-~g~~p--- 153 (284)
++.++..+...+.+++...++..|. .++.+.+++|.++|++||+++|+||+|.+|++.| . ...... ....+
T Consensus 167 ~~~l~~~~~~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 244 (412)
T 1yaa_A 167 LNAIQKAPEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD-AYAVRLGVEKLSTVS 244 (412)
T ss_dssp HHHHHHSCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH-THHHHHHHHHTTTTC
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch-hHHHHHHHhcCCCCc
Confidence 8888744323444554555666665 5688999999999999999999999999886544 2 222211 11223
Q ss_pred -c--EEEecccccC-CcceeEEE--e-----cHH----HHHhchh--------------------hh-------------
Q psy11784 154 -D--IITVGKPMGN-GMPIGAVI--T-----SRK----IAESLNC--------------------LD------------- 185 (284)
Q Consensus 154 -D--iv~~sK~l~~-G~p~gav~--~-----~~~----i~~~~~~--------------------l~------------- 185 (284)
+ +.++||.++. |+++|+++ + +++ +++.+.. ++
T Consensus 245 ~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 324 (412)
T 1yaa_A 245 PVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMV 324 (412)
T ss_dssp CEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred ceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 2 3478999997 99999998 7 565 6554432 11
Q ss_pred ----hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCC
Q psy11784 186 ----DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCL 249 (284)
Q Consensus 186 ----~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~ 249 (284)
+++++.+++.+.|+++ .|++.++.+ ....+.+.+.++||++.+ .+|++++. +
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~------~~Ris~~~-~ 392 (412)
T 1yaa_A 325 TMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL-----TPQMVKRLEETHAVYLVA------SGRASIAG-L 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC-----CHHHHHHHHHHHCEECCT------TSEEEGGG-C
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC-----CHHHHHHHHHhCCEEecc------CcEEEEcc-C
Confidence 2334455666666542 123322222 123454445578999985 46998774 5
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy11784 250 TTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~ 267 (284)
+++++++++++|+++++.
T Consensus 393 ~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 393 NQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp CTTTHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 149
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.70 E-value=2.2e-16 Score=147.65 Aligned_cols=235 Identities=12% Similarity=0.054 Sum_probs=157.7
Q ss_pred cHHHHHHHHHHHc-cCCccEEEEcCCCcccchhhhcC---CCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 2 EANDLALQLARAY-TGRQNIVVVDAAYHGTVNLLLDI---SPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 2 eA~e~AlklAr~~-~~r~~il~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
+++..+++..... ..+.+||+...+||+......+. .+..... ..+...|.++.+ .-+ .
T Consensus 139 ~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~-----~~v~~~~~~~~~----~~d--------~ 201 (465)
T 3e9k_A 139 VNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE-----SMRMIKPREGEE----TLR--------I 201 (465)
T ss_dssp HHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH-----HEEEECCCTTCS----SCC--------H
T ss_pred HHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCccee-----eeEEEecCCCCC----ccC--------H
Confidence 4566666554322 24667999999999976543321 1111000 001122322211 111 6
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+++++.++++.+++++|+++.+++..|.+.+ +++|.++|++||+++|+|++|+ +|... ...... ..|+++
T Consensus 202 ~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~-~g~~~---~~~~~~--~~D~~~ 271 (465)
T 3e9k_A 202 EDILEVIEKEGDSIAVILFSGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA-VGNVE---LYLHDW--GVDFAC 271 (465)
T ss_dssp HHHHHHHHHHGGGEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC---CCHHHH--TCCEEE
T ss_pred HHHHHHHHhcCCCeEEEEEeCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhh-cCCcC---Cchhhc--CCCEEE
Confidence 7888888755457999999999999999887 8999999999999999999997 32221 222222 367765
Q ss_pred --ecccccCC-cceeEEEecHHHHHhchh---------------------------------------------------
Q psy11784 158 --VGKPMGNG-MPIGAVITSRKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 158 --~sK~l~~G-~p~gav~~~~~i~~~~~~--------------------------------------------------- 183 (284)
++|.+++| .++|++++++++.+.+..
T Consensus 272 ~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~ 351 (465)
T 3e9k_A 272 WCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQ 351 (465)
T ss_dssp ECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHH
Confidence 55999655 468899988877432210
Q ss_pred ------hhhHHHHHHHHHHHHHh-----------c------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec
Q psy11784 184 ------LDDNRPSGKYLVRPLGI-----------N------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE 234 (284)
Q Consensus 184 ------l~~~~~~~~~l~~~L~~-----------~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~ 234 (284)
.++..++.+++.+.|++ . .|.++++.+. .....+.+.|.++||++...
T Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~~ 428 (465)
T 3e9k_A 352 ATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDVFQELEKRGVVCDKR 428 (465)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCHHHHHHTTTEECEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHHHHHHHHCCEEEecC
Confidence 23556667778777765 2 2666777663 23457889999999999753
Q ss_pred CCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 235 GEYGNVLLFLP-AMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 235 ~~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
. .+++|++| |+.+|++|++++++.|++++++.
T Consensus 429 ~--~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 429 N--PNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp T--TTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred C--CCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 2 58999999 89999999999999999988653
No 150
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.69 E-value=2.4e-15 Score=142.01 Aligned_cols=186 Identities=17% Similarity=0.072 Sum_probs=131.0
Q ss_pred HHHHHHHHHhc-CCC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH-RDN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.++.. ..+ +.+|++.......|.+.+ +++|.++|++||+++++|++|+|+..... +.....++ .
T Consensus 242 ~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~~~~~gi~~ 315 (497)
T 2qma_A 242 ITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALILSS--HKSRLKGVER 315 (497)
T ss_dssp GGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGST--TGGGGTTGGG
T ss_pred HHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHhCc--chHhhcCccc
Confidence 46677777632 122 457777766777787666 99999999999999999999998755443 33334566 7
Q ss_pred CcEEEe--cccccCCcceeEEEecHHH-HHhch----------------------------h------------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRKI-AESLN----------------------------C------------------ 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~i-~~~~~----------------------------~------------------ 183 (284)
+|++++ +|++++++++|+++++++. ++.+. .
T Consensus 316 ~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~ 395 (497)
T 2qma_A 316 AHSISVDFHKLFYQTISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDM 395 (497)
T ss_dssp CSEEEEETTTTTCCCSSCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHH
T ss_pred CCEEEEcchhccCCCcceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHH
Confidence 899877 8999888889999886432 22110 0
Q ss_pred hhhHHHHHHHHHHHHHhc---------cCceeEEEEeccc----HHHHHHHHHHHHCCcEEeecCC--CCCEEEEEc-CC
Q psy11784 184 LDDNRPSGKYLVRPLGIN---------LHIFWCLILLSIT----YYLYRYTRRMKEAKIIVANEGE--YGNVLLFLP-AM 247 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~----~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p-~l 247 (284)
+++..++++++.+.|+++ .+.++.+.+.+.. .....+.+.|.++|+++.+... ..+++|+++ +.
T Consensus 396 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~ 475 (497)
T 2qma_A 396 YDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNP 475 (497)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCC
Confidence 335667788888888774 2335555554321 2245677889999998865322 235899987 88
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q psy11784 248 CLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+|++|+++++++|+++++++
T Consensus 476 ~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 476 CLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp TCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 899999999999999988764
No 151
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.69 E-value=8.8e-16 Score=137.36 Aligned_cols=227 Identities=13% Similarity=0.039 Sum_probs=151.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhh-cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL-DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.+++... ....+|++...+||+...... ...+.. +..+|.+.. +.. | .++
T Consensus 61 t~a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~--~~~--d--------~~~ 116 (352)
T 1iug_A 61 TLAMEALVKNLF--APGERVLVPVYGKFSERFYEIALEAGLV----------VERLDYPYG--DTP--R--------PED 116 (352)
T ss_dssp HHHHHHHHHHHC--CTTCEEEEEECSHHHHHHHHHHHHTTCE----------EEEEECCTT--CCC--C--------TTT
T ss_pred HHHHHHHHHhcc--CCCCeEEEEeCCchhHHHHHHHHHcCCc----------eEEEeCCCC--CCC--C--------HHH
Confidence 367777877662 234578888888888651111 111111 122333221 111 1 223
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+++ +++++|+++..++..|.+.+ +++|.++|++| |+++|+||+|+ +|... +....+ .+|+++
T Consensus 117 l~~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~~---~~~~~~--~~d~~~ 180 (352)
T 1iug_A 117 VAK------EGYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVGE---VALEAM--GVDAAA 180 (352)
T ss_dssp SCC------SSCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTBC---CCSGGG--TCSEEE
T ss_pred Hhc------cCCcEEEEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCcc---eecccc--CeeEEE
Confidence 322 35778999999999998876 89999999999 99999999996 54321 222222 367775
Q ss_pred e--cccccCCcceeEEEecHHHHHh---------ch--------h----------------------------hhhHHHH
Q psy11784 158 V--GKPMGNGMPIGAVITSRKIAES---------LN--------C----------------------------LDDNRPS 190 (284)
Q Consensus 158 ~--sK~l~~G~p~gav~~~~~i~~~---------~~--------~----------------------------l~~~~~~ 190 (284)
+ +|++.++.++|++++++++++. +. . .++++++
T Consensus 181 ~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 260 (352)
T 1iug_A 181 SGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQ 260 (352)
T ss_dssp EESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHH
T ss_pred ecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 6988876678999999887643 11 0 1245566
Q ss_pred HHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 191 GKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 191 ~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.+++.+.|+++ .+.++++.+ +......++.+.|.++||.+.++.. ..+.+|+.++...|+++++++++
T Consensus 261 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 339 (352)
T 1iug_A 261 NALLYGVGEEGGLRPVPKRFSPAVAAFYL-PEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAG 339 (352)
T ss_dssp HHHHHHHHHHTTCEESCSSBCTTCEEEEC-CTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcccccccCCeEEEEEc-CCCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHH
Confidence 77777777764 134556655 2223467899999999999987642 35799999998889999999999
Q ss_pred HHHHHHHHH
Q psy11784 260 TLNRIFTSL 268 (284)
Q Consensus 260 ~l~~~l~~~ 268 (284)
+|+++++++
T Consensus 340 ~l~~~~~~~ 348 (352)
T 1iug_A 340 MFREVLEEI 348 (352)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998765
No 152
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.68 E-value=2.9e-15 Score=137.34 Aligned_cols=233 Identities=14% Similarity=0.155 Sum_probs=136.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccch--hhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN--LLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|+|++.|++.. .....+|++...+||+... ......+.. ....+.+.. ..+..| .+
T Consensus 97 t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~--~~~~~d--------~~ 154 (417)
T 3n0l_A 97 SQANQGVYAAL--INPGDKILGMDLSHGGHLTHGAKVSSSGKM----------YESCFYGVE--LDGRID--------YE 154 (417)
T ss_dssp HHHHHHHHHHH--SCTTCEEEEECC----------------CC----------SEEEEECCC--TTSSCC--------HH
T ss_pred HHHHHHHHHHh--cCCCCEEEecccccccccchhhhhhhhcce----------eeeEeccCC--CCCCcC--------HH
Confidence 46777787766 2234578888888876432 111111110 001121111 111112 67
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEE
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+|++.+++. ++++|++.+ +++|...+ +++|.++|++||+++|+||+|+ |+...|. ... ... ..|+++
T Consensus 155 ~l~~~i~~~--~~~~v~~~~--~~~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~~-~~di~~ 222 (417)
T 3n0l_A 155 KVREIAKKE--KPKLIVCGA--SAYARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGE-HPS--PFP-YAHVVS 222 (417)
T ss_dssp HHHHHHHHH--CCSEEEECC--SSCCSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCC--CTT-TCSEEE
T ss_pred HHHHHHHhc--CCeEEEECC--cccCccCC----HHHHHHHHHHcCCEEEEECccchhhhhccc-CCC--ccc-cceEEE
Confidence 888888632 355666433 33476555 9999999999999999999975 4322222 100 011 358887
Q ss_pred ec--ccccCCcceeEEEec-HHHHHhchh---------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 158 VG--KPMGNGMPIGAVITS-RKIAESLNC---------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 158 ~s--K~l~~G~p~gav~~~-~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+| |+++ |.+.|+++++ +++.+.+.. .++..++.+++.+.|++.
T Consensus 223 ~s~sK~l~-g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (417)
T 3n0l_A 223 STTHKTLR-GPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR 301 (417)
T ss_dssp EESSTTTC-SCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeCccccC-CCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 66 9994 5567999998 677765533 124455556777777663
Q ss_pred ---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-------C-CCCEEEEEcCCC----CCHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------E-YGNVLLFLPAMC----LTTENVLFIVST 260 (284)
Q Consensus 202 ---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~-~~~~lr~~p~l~----~t~~~id~~~~~ 260 (284)
.+.++.+.+.+.......+.+.|.++||++.+.. + ..+.+|+.++.. ++++++++++++
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 302 KFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 1223444443222246678888889999998542 1 236799987643 679999999999
Q ss_pred HHHHHHHH
Q psy11784 261 LNRIFTSL 268 (284)
Q Consensus 261 l~~~l~~~ 268 (284)
|.+++++.
T Consensus 382 l~~~l~~~ 389 (417)
T 3n0l_A 382 IADILDDV 389 (417)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcc
Confidence 99998764
No 153
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.68 E-value=5.1e-16 Score=144.75 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=117.0
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccc-ccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQ-CGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.++... ..+|++ .|..+.++ ++++|+++|++||++||+||+| +|+.+.|. .... .. ..|
T Consensus 174 ~~~l~~~i~~~~--~~~i~~~~~~~~~~~-------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~-~~~~--~~-~~d 240 (447)
T 3h7f_A 174 MDAVRATALEFR--PKVIIAGWSAYPRVL-------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL-HPSP--VP-HAD 240 (447)
T ss_dssp HHHHHHHHHHHC--CSEEEEECSSCCSCC-------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCCS--TT-TCS
T ss_pred HHHHHHHHHhcC--CeEEEEcCCCCCCcc-------CHHHHHHHHHHcCCEEEEECCchhhhhcCCC-CCCC--CC-CCc
Confidence 678888886332 345555 56554332 5999999999999999999997 46544443 2111 11 246
Q ss_pred EE--EecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHH
Q psy11784 155 II--TVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 155 iv--~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~ 199 (284)
++ +++|+++ |.+.|++++++++++.+.. .+++.++.+++.+.|+
T Consensus 241 i~~~s~sK~l~-G~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 319 (447)
T 3h7f_A 241 VVSTTVHKTLG-GGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLM 319 (447)
T ss_dssp EEEEESSGGGC-CCSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCcCCC-CCCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 5689996 5677999999877665433 1246666777777776
Q ss_pred hc----cCc----------eeEEEEecccHHHHHHHHHHHHCCcEEe----ec----CCCCCEEEEEcCCC----CCHHH
Q psy11784 200 IN----LHI----------FWCLILLSITYYLYRYTRRMKEAKIIVA----NE----GEYGNVLLFLPAMC----LTTEN 253 (284)
Q Consensus 200 ~~----~G~----------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~----~~----~~~~~~lr~~p~l~----~t~~~ 253 (284)
+. .|+ ++.+++.+.......+.+.|.++||++. +. ...++.+|+.+|.. ++++|
T Consensus 320 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~ee 399 (447)
T 3h7f_A 320 APDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTE 399 (447)
T ss_dssp SHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHH
T ss_pred hccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHH
Confidence 52 022 3344442222234556666777899988 33 11346799988776 68999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy11784 254 VLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 254 id~~~~~l~~~l~~~~~ 270 (284)
+++++++|++++++..+
T Consensus 400 i~~~~~~l~~~l~~~~~ 416 (447)
T 3h7f_A 400 FTEVADIIATALATGSS 416 (447)
T ss_dssp HHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhccCc
Confidence 99999999999876543
No 154
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.67 E-value=6.2e-15 Score=135.23 Aligned_cols=223 Identities=13% Similarity=0.038 Sum_probs=145.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.|++.. .....+|++...+||+........... .+ ..+.+++.. + .+++
T Consensus 90 ~~a~~~~l~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~~-----~g--~~~~~~~~~---------d--------~~~l 143 (398)
T 1gc0_A 90 MGAITSTLWTL--LRPGDEVLLGNTLYGCTFAFLHHGIGE-----FG--VKLRHVDMA---------D--------LQAL 143 (398)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEESSCCSHHHHHHHHTGGG-----GT--CEEEEECTT---------C--------HHHH
T ss_pred HHHHHHHHHHH--hcCCCEEEEeCCCchhHHHHHHHHHHH-----cC--CEEEEECCC---------C--------HHHH
Confidence 36777777766 233467888889998865543221100 00 011222221 1 5677
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecc
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK 160 (284)
++.++ +++++|++|++++..|.+.+ +++|.++|++||+++|+||+|+.+ ..+. .. .++....+.+++|
T Consensus 144 ~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~-~~~~-~~---~~~~d~~~~S~sK 211 (398)
T 1gc0_A 144 EAAMT---PATRVIYFESPANPNMHMAD----IAGVAKIARKHGATVVVDNTYCTP-YLQR-PL---ELGADLVVHSATK 211 (398)
T ss_dssp HHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHGGGTCEEEEECTTTHH-HHCC-GG---GGTCSEEEEETTT
T ss_pred HHhcC---CCCeEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccc-ccCC-ch---hhCceEEEECCcc
Confidence 77665 46899999999999898876 999999999999999999999843 2332 11 2344444457899
Q ss_pred cccC-Ccce-eEEEecHHHHH-hchh----------------------------hhhHHHHHHHHHHHHHhc--------
Q psy11784 161 PMGN-GMPI-GAVITSRKIAE-SLNC----------------------------LDDNRPSGKYLVRPLGIN-------- 201 (284)
Q Consensus 161 ~l~~-G~p~-gav~~~~~i~~-~~~~----------------------------l~~~~~~~~~l~~~L~~~-------- 201 (284)
.+++ |.++ |+++++++.++ .+.. +++..++.+++.+.|++.
T Consensus 212 ~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~ 291 (398)
T 1gc0_A 212 YLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHY 291 (398)
T ss_dssp TTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred ccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEEC
Confidence 9996 5787 88888877654 2211 223455566666666552
Q ss_pred ------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC----------------------------
Q psy11784 202 ------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG---------------------------- 235 (284)
Q Consensus 202 ------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------------------------- 235 (284)
.|.++.+++.. ......+.+.+.|+......
T Consensus 292 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g 368 (398)
T 1gc0_A 292 PGLASFPQYTLARQQMSQPGGMIAFELKG---GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYG 368 (398)
T ss_dssp C----------------CCTTEEEEEETT---HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTT
T ss_pred CCCCCCcCHHHHHhhCCCCceEEEEEECC---CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcC
Confidence 25566776631 12334555667777765411
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 236 EYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 236 ~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
...+.||+++++..++++|+.+.+.|+++
T Consensus 369 ~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 369 ISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp CCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 01379999999999999999998888754
No 155
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.67 E-value=7.3e-16 Score=138.67 Aligned_cols=180 Identities=11% Similarity=0.043 Sum_probs=122.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc--cccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG--RSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g--r~G~~~~a~~~~g~~pD 154 (284)
.+++++. .+++++|++++.++..|..+++.+++++|.++|++||++||+||+|..+. ..|. ....+....|
T Consensus 128 ~~~l~~~----~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~d 200 (359)
T 3pj0_A 128 IDDIKSL----REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQK---SAEEICALFD 200 (359)
T ss_dssp HHHHHTC----SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTC---CHHHHHTTCS
T ss_pred HHHHHhc----cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCC---CHHHhhccCC
Confidence 4556554 35689999998887665567899999999999999999999999885221 1121 0111112346
Q ss_pred EE--EecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhcc-
Q psy11784 155 II--TVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGINL- 202 (284)
Q Consensus 155 iv--~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~~- 202 (284)
++ +++|+++++.. |++++++++++.+.. +++..++.+++.+.|+++.
T Consensus 201 ~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 201 SVYVSFYKGIGGIAG-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp EEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTT
T ss_pred EEEEeccccCCCcce-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCC
Confidence 65 78899886533 777889888876542 2355667778888887751
Q ss_pred ---------CceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCC----CCCEEEEEc---CCCCCHHHHHHHHHHHHHH
Q psy11784 203 ---------HIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGE----YGNVLLFLP---AMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 203 ---------G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~----~~~~lr~~p---~l~~t~~~id~~~~~l~~~ 264 (284)
+.++.+.+... ......+.+.|.++||++.++.. ..+++|+.. ....+.+++++++++|.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 280 VKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 22344444211 23467888999999999987632 235788854 3446899999999998765
No 156
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.66 E-value=3.5e-16 Score=147.43 Aligned_cols=234 Identities=13% Similarity=0.058 Sum_probs=155.5
Q ss_pred CcHHHHHHHHHHHcc----C--CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCC-CcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYT----G--RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPD-TYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~----~--r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 73 (284)
|||+..|++.+|.++ | +..|+.-..+ |.....+....+.. +..+|..+ .++ -|
T Consensus 136 t~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~-h~~~~~~~~~~G~~----------~~~v~~~~~~~~----~d----- 195 (497)
T 3mc6_A 136 TESLLLACLSAKMYALHHRGITEPEIIAPVTA-HAGFDKAAYYFGMK----------LRHVELDPTTYQ----VD----- 195 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSSCEEEEETTS-CHHHHHHHHHSCCE----------EEEECBCTTTCS----BC-----
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEeCCc-cHHHHHHHHHcCCe----------EEEEecCcccCc----CC-----
Confidence 478999999998763 3 3456655544 44433333222211 22333322 111 11
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc-------cCc-ccc
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS-------GSH-FWA 145 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-------G~~-~~a 145 (284)
.++|++.++ +++++|+++..++..|.+.+ +++|.++|++||++||+||+|+|+.+. |.. .+.
T Consensus 196 ---~~~l~~~i~---~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~ 265 (497)
T 3mc6_A 196 ---LGKVKKFIN---KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD 265 (497)
T ss_dssp ---TTTTGGGCC---SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS
T ss_pred ---HHHHHHHHh---hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc
Confidence 345565554 46899999999988898776 889999999999999999999876432 110 123
Q ss_pred ccccCCCCcEEEe--cccccCCcceeEEEecHHHHHhch----------------------------h------------
Q psy11784 146 FQTQGAVPDIITV--GKPMGNGMPIGAVITSRKIAESLN----------------------------C------------ 183 (284)
Q Consensus 146 ~~~~g~~pDiv~~--sK~l~~G~p~gav~~~~~i~~~~~----------------------------~------------ 183 (284)
....|+ |++++ .|.+.+|.++|+++++++.+.... .
T Consensus 266 ~~~~g~--d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~ 343 (497)
T 3mc6_A 266 FRVPGV--TSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGY 343 (497)
T ss_dssp TTSTTC--CEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCC--cEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHH
Confidence 333444 66654 598888889999999776554220 0
Q ss_pred ---hhhHHHHHHHHHHHHHh-ccC---------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCC
Q psy11784 184 ---LDDNRPSGKYLVRPLGI-NLH---------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLT 250 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~-~~G---------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t 250 (284)
.++..++.+++.+.|++ +.| .++.+.. ......++.+.|.++||.+.... ..+.+|+.++ .+|
T Consensus 344 ~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~--~~~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~t 419 (497)
T 3mc6_A 344 IESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSS--KTLNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RLS 419 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEEC--TTTTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeC--CCCCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CCC
Confidence 23566778888888887 422 2223222 22357789999999999987653 3457899988 789
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy11784 251 TENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~~~ 270 (284)
++++++++++|+++++++.+
T Consensus 420 ~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 420 AHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp TCTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988754
No 157
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.66 E-value=4.5e-15 Score=135.95 Aligned_cols=226 Identities=15% Similarity=0.105 Sum_probs=144.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.+++..+. ....+|++...+||+....+.. .+.. +..+|.... .+..| .+++
T Consensus 88 t~a~~~~l~~~~~-~~gd~vl~~~~~~~~~~~~~~~-~g~~----------~~~~~~~~~---~~~~d--------~~~l 144 (399)
T 2oga_A 88 MDALQLALRGLGI-GPGDEVIVPSHTYIASWLAVSA-TGAT----------PVPVEPHED---HPTLD--------PLLV 144 (399)
T ss_dssp HHHHHHHHHHTTC-CTTCEEEEESSSCTHHHHHHHH-TTCE----------EEEECBCSS---SSSBC--------HHHH
T ss_pred HHHHHHHHHHhCC-CCcCEEEECCCccHHHHHHHHH-CCCE----------EEEEecCCC---CCCcC--------HHHH
Confidence 4677888877642 2346789999999985443321 1111 112332110 11111 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-ccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-GRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.++ +++++|++++. .|...+ +++|.++|++||+++|+||+|+.+ ...|. ..+..+|++++|
T Consensus 145 ~~~i~---~~~~~v~~~n~---tG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~------~~~~~~di~~~S 208 (399)
T 2oga_A 145 EKAIT---PRTRALLPVHL---YGHPAD----MDALRELADRHGLHIVEDAAQAHGARYRGR------RIGAGSSVAAFS 208 (399)
T ss_dssp HHHCC---TTEEEECCBCG---GGCCCC----HHHHHHHHHHHTCEECEECTTCTTCEETTE------ETTCTTCEEEEE
T ss_pred HHhcC---CCCeEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECcccccCccCCe------ecccccCEEEEe
Confidence 77765 35788886543 455544 999999999999999999999732 11222 233347998884
Q ss_pred ----ccccC-CcceeEEEec-HHHHHhchh---------------------------------------hhhHHHHHHHH
Q psy11784 160 ----KPMGN-GMPIGAVITS-RKIAESLNC---------------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 160 ----K~l~~-G~p~gav~~~-~~i~~~~~~---------------------------------------l~~~~~~~~~l 194 (284)
|.+++ | +.|+++++ +++++.+.. .++.+++.+++
T Consensus 209 ~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l 287 (399)
T 2oga_A 209 FYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEY 287 (399)
T ss_dssp CCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 8 88999886 776543210 12444556666
Q ss_pred HHHHHhccCc------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-------------------------
Q psy11784 195 VRPLGINLHI------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEY------------------------- 237 (284)
Q Consensus 195 ~~~L~~~~G~------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~------------------------- 237 (284)
.+.|+++.|+ ++.+.+. .....++.+.|.++||.+.+..+.
T Consensus 288 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 365 (399)
T 2oga_A 288 LSGLAGLPGIGLPVTAPDTDPVWHLFTVR--TERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFA 365 (399)
T ss_dssp HHHTTTCTTCBCCCCCTTEECCCSSEEEE--CSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHH
T ss_pred HHHhccCCCccccCCCCCCcceeEEEEEE--CCCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHH
Confidence 6666653121 1112221 124678999999999999863210
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 238 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+.+|+.++..+|++|+++++++|+++++++
T Consensus 366 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 366 RQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred hCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1579999999999999999999999988754
No 158
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.65 E-value=3.3e-15 Score=137.11 Aligned_cols=229 Identities=15% Similarity=0.163 Sum_probs=142.0
Q ss_pred cHHHHHHHHHHHccCC-ccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGR-QNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 2 eA~e~AlklAr~~~~r-~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+|++.+..+++.+.++ .+|++...+|++....+.... .. +..+|..+. ..+.-| .+++
T Consensus 115 ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g-~~----------~~~~~~~~~--~~~~~d--------~~~l 173 (409)
T 4eu1_A 115 GALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAG-ME----------LTPYSYYDP--ATKGLN--------LAGM 173 (409)
T ss_dssp HHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTT-CE----------EEEECCEET--TTTEEC--------HHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcC-Ce----------EEEEEeecC--cCCcCc--------HHHH
Confidence 5677777777777655 788888888887654433221 11 112222100 001111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--cccccc-ccCCCCcEE-
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQ-TQGAVPDII- 156 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~-~~g~~pDiv- 156 (284)
++.++..++..+.+++...++..|. ..+.+.+++|.++|++||+++|+||+|.+|+..+. ..+... ..+..++++
T Consensus 174 ~~~l~~~~~~~~~i~~~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 252 (409)
T 4eu1_A 174 LECLDKAPEGSVILVHACAHNPTGV-DPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIV 252 (409)
T ss_dssp HHHHHHSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEE
T ss_pred HHHHHhCCCCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEE
Confidence 8888754445555665444666665 56888999999999999999999999998865541 012222 224556654
Q ss_pred --Eeccccc-CCcceeEE---EecHH----HHHhchh--------------------hh-----------------hHHH
Q psy11784 157 --TVGKPMG-NGMPIGAV---ITSRK----IAESLNC--------------------LD-----------------DNRP 189 (284)
Q Consensus 157 --~~sK~l~-~G~p~gav---~~~~~----i~~~~~~--------------------l~-----------------~~~~ 189 (284)
++||.++ .|+++|++ +++++ +.+.+.. ++ ++++
T Consensus 253 ~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 332 (409)
T 4eu1_A 253 AQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAE 332 (409)
T ss_dssp EEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 7899998 68999995 56666 5444322 11 3344
Q ss_pred HHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCCHHHHHH
Q psy11784 190 SGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 190 ~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~ 256 (284)
+.+++.+.|+++ .|++.++.+ . .+++..++ ++||++.|+ .|++.+ .++++++++
T Consensus 333 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~---~---~~~~~~ll~~~gv~v~p~------~Ri~~~-~~~~~~i~~ 399 (409)
T 4eu1_A 333 VRKRLVSELKACGSVHDWSHIERQVGMMAYTGL---T---REQVELLRSEYHIYMTLN------GRAAVS-GLNSTNVEY 399 (409)
T ss_dssp HHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCC---C---HHHHHHHHHHHCEECCTT------CEEEGG-GCCTTTHHH
T ss_pred HHHHHHHHHHhcCCCCCcceecCCceEEEEeCC---C---HHHHHHHHHcCCEEEcCC------CEEEEE-ecCHhhHHH
Confidence 455666666552 122323222 1 23455665 679999863 266654 467888999
Q ss_pred HHHHHHHHH
Q psy11784 257 IVSTLNRIF 265 (284)
Q Consensus 257 ~~~~l~~~l 265 (284)
++++|.+++
T Consensus 400 ~~~~l~~~l 408 (409)
T 4eu1_A 400 VSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998765
No 159
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.65 E-value=6.8e-15 Score=133.16 Aligned_cols=175 Identities=10% Similarity=0.068 Sum_probs=126.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.++|++.++. .++++|++++.++..|.+.+ +++|.++|++| |+++|+||+|+ +|.. .+.... ..+|
T Consensus 126 ~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~---~~~~~~--~~~d 193 (385)
T 2bkw_A 126 LELITEKLSQ--NSYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCE---EFEFDE--WGVD 193 (385)
T ss_dssp HHHHHHHHHH--SCCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTS---CCCTTT--TTCS
T ss_pred HHHHHHHHhc--CCCCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCc---cccccc--cCce
Confidence 6778888863 25788999999999998877 89999999999 99999999997 3322 122222 3468
Q ss_pred EEEe--cccccCCcceeEEEecHHHHH-hc-------------------------h--------h---------------
Q psy11784 155 IITV--GKPMGNGMPIGAVITSRKIAE-SL-------------------------N--------C--------------- 183 (284)
Q Consensus 155 iv~~--sK~l~~G~p~gav~~~~~i~~-~~-------------------------~--------~--------------- 183 (284)
++++ +|+++++.++|++++++++++ .+ . .
T Consensus 194 ~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 194 FALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 7755 699987556799999887755 22 0 0
Q ss_pred ---------hhhHHHHHHHHHHHH-Hhc-----c--------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---C
Q psy11784 184 ---------LDDNRPSGKYLVRPL-GIN-----L--------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---Y 237 (284)
Q Consensus 184 ---------l~~~~~~~~~l~~~L-~~~-----~--------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~ 237 (284)
.++.+++.+++.+.| +++ . +.++++.+ +. ..++.+.|.++||.+.++.. .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~l~~~gi~v~~g~~~~~~ 349 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYV-AD---PPDVIAFLKSHGVVIAGGIHKDIG 349 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEEC-SC---HHHHHHHHHHTTEECBCCCCTTTG
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEec-CC---HHHHHHHHHHCCeEEeCCCCcccC
Confidence 124556677888888 653 1 23444444 22 66788999999999987543 2
Q ss_pred CCEEEEE-cC---CCCCHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFL-PA---MCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 238 ~~~lr~~-p~---l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+.+|++ .+ +.+|++|+++++++|++++++
T Consensus 350 ~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 350 PKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp GGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred CCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 4789998 33 357999999999999887653
No 160
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.65 E-value=2.4e-15 Score=139.06 Aligned_cols=173 Identities=12% Similarity=0.082 Sum_probs=122.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++++|++|+.++..|.+.+ +++|.++|++||++||+||+|+ +|. .+....+|....+.
T Consensus 156 ~~~l~~ai~---~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~----~~~-~~~~~~~g~div~~ 223 (414)
T 3ndn_A 156 LSQWERALS---VPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFA----TPL-LQQGFPLGVDVVVY 223 (414)
T ss_dssp HHHHHHHTS---SCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTT----HHH-HCCCGGGTCSEEEE
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCc----ccc-cCCchhcCCCeEec
Confidence 677777775 46889999999999998876 9999999999999999999997 221 12222445544455
Q ss_pred EecccccC-C-cceeEEEecHHHHH-hchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 157 TVGKPMGN-G-MPIGAVITSRKIAE-SLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 157 ~~sK~l~~-G-~p~gav~~~~~i~~-~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+++|.+++ | +++|+++++++.+. .+.. +++..++.+++.+.|++.
T Consensus 224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~ 303 (414)
T 3ndn_A 224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRW 303 (414)
T ss_dssp ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeE
Confidence 68899987 7 78999999887765 3332 234555666777777654
Q ss_pred ---------------------cCceeEEEEecc----cHHHHHHHHHHHHCCcEEeecC---------------------
Q psy11784 202 ---------------------LHIFWCLILLSI----TYYLYRYTRRMKEAKIIVANEG--------------------- 235 (284)
Q Consensus 202 ---------------------~G~~~~i~~~~~----~~~~~~~~~~l~~~Gv~~~~~~--------------------- 235 (284)
.|.++++++.+. ...+.++.+.|...++.+..++
T Consensus 304 v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~ 383 (414)
T 3ndn_A 304 VRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGR 383 (414)
T ss_dssp EECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHH
T ss_pred EECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHH
Confidence 277899999532 4567788888876665554332
Q ss_pred ----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 236 ----EYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 236 ----~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
...+.||++.. .|+++.+++.|++++
T Consensus 384 ~~~g~~~~~iRlsvG----~e~~~dli~dl~~al 413 (414)
T 3ndn_A 384 AAIGLGDGVVRISVG----LEDTDDLIADIDRAL 413 (414)
T ss_dssp HHTTCCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred HhcCCCCCeEEEEeC----cCCHHHHHHHHHHhh
Confidence 23467888543 466777777777765
No 161
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.65 E-value=4.3e-15 Score=134.32 Aligned_cols=225 Identities=13% Similarity=0.186 Sum_probs=142.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++..+. ....+|++...+||+....+.... .. +..+|..+ .+.-| .+++
T Consensus 63 t~a~~~~~~~~~~-~~gd~v~~~~~~~~~~~~~~~~~g-~~----------~~~~~~~~----~~~~d--------~~~l 118 (374)
T 3uwc_A 63 TDALAMSFKMLNI-GAGDEVITCANTFIASVGAIVQAG-AT----------PVLVDSEN----GYVID--------PEKI 118 (374)
T ss_dssp HHHHHHHHHHTTC-CTTCEEEEESSSCHHHHHHHHHTT-CE----------EEEECBCT----TSSBC--------GGGT
T ss_pred HHHHHHHHHHcCC-CCCCEEEECCCccHHHHHHHHHcC-CE----------EEEEecCC----CCCcC--------HHHH
Confidence 4677777776642 234678888888888655433221 11 11223221 11111 3455
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec-
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG- 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s- 159 (284)
++.++ +++++|+ |. ...|...+ +++|.++|++||+++|+||+|+.+. .+.....+..+|++++|
T Consensus 119 ~~~~~---~~~~~v~--~~-n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~-----~~~~~~~~~~~d~~~~s~ 183 (374)
T 3uwc_A 119 EAAIT---DKTKAIM--PV-HYTGNIAD----MPALAKIAKKHNLHIVEDACQTILG-----RINDKFVGSWGQFACFSL 183 (374)
T ss_dssp GGGCC---TTEEEEC--CB-CGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTC-----EETTEETTSSSSEEEEEC
T ss_pred HHhCC---CCceEEE--Ee-CCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCc-----eeCCeeccccccEEEEeC
Confidence 55553 3577777 33 34565554 9999999999999999999998321 22334455567999888
Q ss_pred ---ccccC-CcceeEEEecH-HHHHhchh---------------------------------------hhhHHHHHHHHH
Q psy11784 160 ---KPMGN-GMPIGAVITSR-KIAESLNC---------------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 160 ---K~l~~-G~p~gav~~~~-~i~~~~~~---------------------------------------l~~~~~~~~~l~ 195 (284)
|++++ |. .|++++++ ++.+.+.. .++.+++.+++.
T Consensus 184 ~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~ 262 (374)
T 3uwc_A 184 HPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYD 262 (374)
T ss_dssp SSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 65 77777654 45332211 234556666677
Q ss_pred HHHHhccC-ce------------eEEEEecccHHHHHHHHHHHHCCcEEeecCC-------------------------C
Q psy11784 196 RPLGINLH-IF------------WCLILLSITYYLYRYTRRMKEAKIIVANEGE-------------------------Y 237 (284)
Q Consensus 196 ~~L~~~~G-~~------------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------------------~ 237 (284)
+.|+++.+ +- +.+.+. ......+.+.|.++||.+.++.+ .
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (374)
T 3uwc_A 263 QSFVDLSEFIDVPVRREGVYHVFHIYVLR--VKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHG 340 (374)
T ss_dssp HHTGGGTTTEECCCCCTTEECCCSSEEEE--ETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHH
T ss_pred HHhccCCCeEEeccCCCCCceeeEEEEEE--cCCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHH
Confidence 77665322 11 111111 12467899999999999886531 0
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 238 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+.+|+.++..+|++||++++++|++++++
T Consensus 341 ~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 341 EAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred hCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 168999999999999999999999998864
No 162
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.64 E-value=9.1e-15 Score=130.85 Aligned_cols=184 Identities=13% Similarity=0.194 Sum_probs=127.8
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc---cccCccccccccC
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG---RSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g---r~G~~~~a~~~~g 150 (284)
.+++++.++.. .+++++|++++.++..|..+.|.+.+++|.++|++||+++|+||+|. ++ ..|. ......
T Consensus 116 ~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~-~~~~~~~~~---~~~~~~ 191 (347)
T 1jg8_A 116 PDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARI-FNASIASGV---PVKEYA 191 (347)
T ss_dssp HHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTH-HHHHHHHCC---CHHHHH
T ss_pred HHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhh-hcchhhcCC---ChHHhc
Confidence 67788777531 12589999999998874456788999999999999999999999874 21 1121 111111
Q ss_pred CCCc--EEEecccccCCcceeE-EEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHH
Q psy11784 151 AVPD--IITVGKPMGNGMPIGA-VITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 151 ~~pD--iv~~sK~l~~G~p~ga-v~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L 198 (284)
...| +++++|++++ |+|+ +++++++++.+.. +++..++.+++.+.|
T Consensus 192 ~~~d~~~~s~sK~l~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L 269 (347)
T 1jg8_A 192 GYADSVMFCLSKGLCA--PVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKL 269 (347)
T ss_dssp HTCSEEEEESSSTTCC--SSCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHH
T ss_pred ccccEEEEecccccCC--CceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233 3468999975 4674 5567777654322 223345667777777
Q ss_pred Hhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 199 GIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 199 ~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+++ .|.++++.+........++++.|.++||.+.+.+ .+.+|+.++..+|++|+++++++|.++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 270 KEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVS--DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp HHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEE--TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEecCC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 663 2445555552112346789999999999998754 4789999988999999999999999987653
No 163
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.64 E-value=9.8e-15 Score=133.63 Aligned_cols=139 Identities=16% Similarity=0.063 Sum_probs=95.0
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhh---cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL---DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
+|++.+++.. .....+|++...+|||...... ...+. .+.++|.. + .+
T Consensus 85 ~ai~~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~----------~~~~v~~~--------d---------~~ 135 (389)
T 3acz_A 85 GAISSSTLAF--LQKGDHLIAGDTLYGCTVSLFTHWLPRFGI----------EVDLIDTS--------D---------VE 135 (389)
T ss_dssp HHHHHHHTTT--CCTTCEEEEESSCCHHHHHHHHHHHHHTTC----------EEEEECTT--------C---------HH
T ss_pred HHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHHHcCC----------EEEEECCC--------C---------HH
Confidence 5566666544 2334578888888888544321 11111 11223321 1 56
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII-- 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv-- 156 (284)
++++.++ +++++|++|+.++..|.+.+ +++|.++|++||+++|+||+|+++ ..+. .+ +..+|++
T Consensus 136 ~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~livD~~~~~~-~~~~-~~-----~~~~di~~~ 201 (389)
T 3acz_A 136 KVKAAWK---PNTKMVYLESPANPTCKVSD----IKGIAVVCHERGARLVVDATFTSP-CFLK-PL-----ELGADIALH 201 (389)
T ss_dssp HHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT-TTCC-GG-----GTTCSEEEE
T ss_pred HHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccc-cccC-cc-----ccCCeEEEE
Confidence 6776664 46899999999999998886 999999999999999999999854 2222 11 2458888
Q ss_pred EecccccC-Ccce-eEEEecH-HHHHhchh
Q psy11784 157 TVGKPMGN-GMPI-GAVITSR-KIAESLNC 183 (284)
Q Consensus 157 ~~sK~l~~-G~p~-gav~~~~-~i~~~~~~ 183 (284)
+++|.+++ |.++ |++++++ ++++.+..
T Consensus 202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~ 231 (389)
T 3acz_A 202 SVSKYINGHGDVIGGVSSAKTAEDIATIKF 231 (389)
T ss_dssp ETTTTTTCSSCCCCEEEEESSHHHHHHHHH
T ss_pred CChhhccCCCCceeEEEEECcHHHHHHHHH
Confidence 68899987 4787 9999998 88776543
No 164
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.63 E-value=1.6e-14 Score=128.59 Aligned_cols=162 Identities=12% Similarity=0.098 Sum_probs=115.8
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEeccccc-CCcce
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG-NGMPI 168 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~-~G~p~ 168 (284)
+..++++...++..|...+ ++++.++|+++++ +|+||+|.+|+..+. . .....+..-.+.++||.++ .|+++
T Consensus 135 ~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~-~-~~~~~~~~i~~~S~sK~~g~~G~r~ 207 (337)
T 3p1t_A 135 RDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRA-R-GLAYGENELVFRSFSKSYGLAGLRL 207 (337)
T ss_dssp TTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSS-S-CCCCBTTEEEEEESSSTTCCTTTCC
T ss_pred CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhccccc-c-ccccCCCEEEEeeCchhccCcchhe
Confidence 4567777777888888887 7789999999997 566999998865443 1 1111111122447899998 78999
Q ss_pred eEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEEEecc
Q psy11784 169 GAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLILLSI 213 (284)
Q Consensus 169 gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~~~ 213 (284)
|++++++++++.+.. ++++.++.+++.+.|+++ .|.++.+.. ++
T Consensus 208 G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~-~~ 286 (337)
T 3p1t_A 208 GALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLGYRVASSEANFVLVEN-AA 286 (337)
T ss_dssp EEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSEEEEEC-TT
T ss_pred EEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCcCEECCCCCeEEEEEc-CC
Confidence 999999998887654 224555667777777764 355555554 22
Q ss_pred cHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 214 TYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 214 ~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
...+.+.|.++||++.++..+ .+++|++.. ++++++++++.|++++
T Consensus 287 ---~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 287 ---GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp ---THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 346777888999999987543 479999754 7999999999988764
No 165
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.4e-14 Score=132.43 Aligned_cols=223 Identities=14% Similarity=0.108 Sum_probs=144.5
Q ss_pred cHHHHHHHHH-HHccCCccEEEEcCCCcccchhhhcC---CCCcccccCCCCCceEEccCC-CCcCCCCCCCchHHHHHH
Q psy11784 2 EANDLALQLA-RAYTGRQNIVVVDAAYHGTVNLLLDI---SPRAFMLSSEKKPWVHVIPFP-DTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 2 eA~e~AlklA-r~~~~r~~il~~~~~yHG~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 76 (284)
+|++.+++.. +......+|++...+|++.......+ .+.. +.++|.. +. ..-|
T Consensus 97 ~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~----------v~~v~~~~~~----~~~d-------- 154 (406)
T 3cai_A 97 VLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK----------VKWAEVDIET----GELP-------- 154 (406)
T ss_dssp HHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE----------EEEECCCTTT----CCCC--------
T ss_pred HHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe----------EEEEecCccc----CCcC--------
Confidence 5666666632 23444567888888888865433221 1111 1223322 11 1111
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++|++.+. +++++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ +|... +....++ +|++
T Consensus 155 ~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~~--~d~~ 221 (406)
T 3cai_A 155 TWQWESLIS---KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL---LDIRETD--ADVV 221 (406)
T ss_dssp GGGHHHHCC---TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC---CCHHHHC--CSEE
T ss_pred HHHHHHHhC---CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC---CCchhcC--CCEE
Confidence 456666664 46899999999999998877 8999999999999999999997 33221 2223333 6776
Q ss_pred E--ecccccCCccee-EEEecHHHHHhchh-----------------------------hh-------------------
Q psy11784 157 T--VGKPMGNGMPIG-AVITSRKIAESLNC-----------------------------LD------------------- 185 (284)
Q Consensus 157 ~--~sK~l~~G~p~g-av~~~~~i~~~~~~-----------------------------l~------------------- 185 (284)
+ ++|.++.+ +| ++++++++++.+.. ++
T Consensus 222 ~~s~~K~~g~~--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 299 (406)
T 3cai_A 222 TVNAHAWGGPP--IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAV 299 (406)
T ss_dssp EEEGGGGTSCS--CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHH
T ss_pred EeehhhhcCCC--cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhh
Confidence 5 57977543 88 99999888754310 11
Q ss_pred -------hHHHHHHHHHHHHHhcc-----------CceeEEEEecccHHHHHHHHHHHHCCcEEeecC-----------C
Q psy11784 186 -------DNRPSGKYLVRPLGINL-----------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-----------E 236 (284)
Q Consensus 186 -------~~~~~~~~l~~~L~~~~-----------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------~ 236 (284)
+.+++.+++.+.|+++. +.++.+.+ +. ....++.+.|.++||.+.++. .
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~ 377 (406)
T 3cai_A 300 SMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAV-HK-VPADRVVQRLADNGILAIANTGSRVLDVLGVND 377 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEE-TT-BCHHHHHHHHHHTTEECEECCSCHHHHHHTTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEE-CC-cCHHHHHHHHHHCCcEEecCChHHHHHHcCCCC
Confidence 12344555666665531 22444544 21 246678899999999998754 1
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 237 YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 237 ~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
..+.+|+.++..+|++|+++++++|++
T Consensus 378 ~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 378 VGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp TTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred CCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 247899999999999999999999864
No 166
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.63 E-value=2.3e-14 Score=128.58 Aligned_cols=169 Identities=8% Similarity=0.126 Sum_probs=119.8
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc--ccccCCCCcEEEeccccc-CCc
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA--FQTQGAVPDIITVGKPMG-NGM 166 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a--~~~~g~~pDiv~~sK~l~-~G~ 166 (284)
++.+|+++..++..|.+.+ .+.+++|.++|++ .++|+||+|++|++.+. ... ....+....+.++||.++ .|+
T Consensus 129 ~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~--~~li~Dea~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~ 204 (350)
T 3fkd_A 129 NMDFCWLCNPNNPDGRLLQ-RTEILRLLNDHPD--TTFVLDQSYVSFTTEEV-IRPADIKGRKNLVMVYSFSHAYGIPGL 204 (350)
T ss_dssp TCSEEEEESSCTTTCCCCC-HHHHHHHHHHCTT--SEEEEECTTTTSCSSCC-CCGGGGTTCSSEEEEEESHHHHSCGGG
T ss_pred CCCEEEEeCCCCCcCCCCC-HHHHHHHHHhCCC--CEEEEECchhhhccCcc-hhhHHhhcCCCEEEEecCchhccCcch
Confidence 4667777766777787654 4445555555554 49999999998877664 211 112222233457899998 789
Q ss_pred ceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------cCceeEEEE
Q psy11784 167 PIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--------LHIFWCLIL 210 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~i~~ 210 (284)
++|++++++++++.+.. +++..++.+++.+.|+++ .|.++.+.+
T Consensus 205 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 284 (350)
T 3fkd_A 205 RIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRL 284 (350)
T ss_dssp CCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEECCCSSSEEEEEE
T ss_pred heEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEECCCCCcEEEEEC
Confidence 99999999999887654 223446777888888765 456666766
Q ss_pred ecccHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 211 LSITYYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 211 ~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
. .. ...++++.|.+ +||++.++..+ .+.+|+++. ++++++++++.|++++++
T Consensus 285 ~-~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 285 K-KG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp S-SS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred C-CC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence 3 32 57789999998 99999987543 578999754 889999999988877654
No 167
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.63 E-value=1.4e-14 Score=130.25 Aligned_cols=177 Identities=14% Similarity=0.038 Sum_probs=121.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-----cCccccCccccccccCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-----GMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-----G~gr~G~~~~a~~~~g~ 151 (284)
.+++++. . ++++|++++.++..|..+++.+.+++|.++|++||++||+||+|. .+|+... .+. -
T Consensus 127 ~~~l~~~----~-~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~-----~ 195 (357)
T 3lws_A 127 LDEIKAL----P-DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAA-EIA-----G 195 (357)
T ss_dssp HHHHHTC----C-SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHH-HHH-----T
T ss_pred HHHHhcC----c-CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChH-HHH-----h
Confidence 4555543 2 378899999887764467789999999999999999999999875 2233221 111 1
Q ss_pred CCcE--EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 152 VPDI--ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 152 ~pDi--v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
..|+ .+++|++++... |++++++++++.+.. +++..++.+++.+.|++
T Consensus 196 ~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 274 (357)
T 3lws_A 196 LFDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNA 274 (357)
T ss_dssp TSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2344 489999964322 888889888776542 22456677788888877
Q ss_pred c----------cCceeEEEEeccc-HHHHHHHHHHHHCCcEEeecC---CCCCEEEEEcC---CCCCHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSIT-YYLYRYTRRMKEAKIIVANEG---EYGNVLLFLPA---MCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~-~~~~~~~~~l~~~Gv~~~~~~---~~~~~lr~~p~---l~~t~~~id~~~~~l~~ 263 (284)
+ .+.++++.+.... .....+.+.|.++||++.++. +....+|++.. +..+++++++++++|.+
T Consensus 275 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~ 354 (357)
T 3lws_A 275 LPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQ 354 (357)
T ss_dssp STTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHH
T ss_pred CCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHH
Confidence 5 2345556553211 236778889999999998763 22247888654 44689999999999987
Q ss_pred HH
Q psy11784 264 IF 265 (284)
Q Consensus 264 ~l 265 (284)
++
T Consensus 355 al 356 (357)
T 3lws_A 355 AF 356 (357)
T ss_dssp HC
T ss_pred hc
Confidence 64
No 168
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.63 E-value=1e-14 Score=130.28 Aligned_cols=159 Identities=14% Similarity=0.093 Sum_probs=110.5
Q ss_pred CeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCCCcEEEeccccc-CCc
Q psy11784 90 NIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAVPDIITVGKPMG-NGM 166 (284)
Q Consensus 90 ~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~pDiv~~sK~l~-~G~ 166 (284)
++++|+ ..| ++..|.+. |.+.+++|.++| | ++|+||+|++|+. +. ... ....+....+.++||.++ .|+
T Consensus 138 ~~~~v~l~~p-~nptG~~~-~~~~l~~l~~~~---~-~li~De~~~~~~~-~~-~~~~~~~~~~~i~~~s~sK~~g~~G~ 209 (335)
T 1uu1_A 138 EGDVVFIPNP-NNPTGHVF-EREEIERILKTG---A-FVALDEAYYEFHG-ES-YVDFLKKYENLAVIRTFSKAFSLAAQ 209 (335)
T ss_dssp TTEEEEEESS-CTTTCCCC-CHHHHHHHHHTT---C-EEEEECTTHHHHC-CC-CGGGGGTCSSEEEEEESTTTTTCGGG
T ss_pred CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHhC---C-EEEEECcchhhcc-hh-HHHHhhhCCCEEEEecchhhcCCccc
Confidence 456666 666 66677654 566666555555 8 9999999997743 22 222 122333344568999998 789
Q ss_pred ceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEEEe
Q psy11784 167 PIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLILL 211 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~ 211 (284)
++|++++++++++.+.. .++++++.+++.+.|++. .|.++++.+
T Consensus 210 r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~- 288 (335)
T 1uu1_A 210 RVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFM- 288 (335)
T ss_dssp CCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCCSSEEEEEC-
T ss_pred CeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCCCCeEEEEEC-
Confidence 99999999998876644 224556677777777653 355666665
Q ss_pred cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 212 SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 212 ~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+. ....++.+.|.++||++.+ ..+++|+++. +++|+++++++|+++
T Consensus 289 ~~-~~~~~~~~~l~~~gi~v~~---~~~~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 289 EK-EEKERLLEHLRTKNVAVRS---FREGVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp CT-HHHHHHHHHHHHHTEEEEE---ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred CC-CCHHHHHHHHHHCCEEEEE---CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 22 3567789999999999997 3578999863 578899999988653
No 169
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.63 E-value=2.8e-14 Score=131.47 Aligned_cols=169 Identities=15% Similarity=0.138 Sum_probs=119.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.++|++.++ +++++|++|++++..|.+.+ +++|.++|++||+++|+||+|++++.... .....+|++
T Consensus 130 ~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~------~~~~~~di~ 196 (412)
T 2cb1_A 130 PEAVREALS---AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCR------PLAWGAHVV 196 (412)
T ss_dssp HHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCC------GGGGTCSEE
T ss_pred HHHHHHHhc---cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCC------ccccCCeEE
Confidence 466777664 46899999999999998876 99999999999999999999986532222 122458888
Q ss_pred E--ecccccC-CcceeEEEecH----------------------------HHHHhchh---------------------h
Q psy11784 157 T--VGKPMGN-GMPIGAVITSR----------------------------KIAESLNC---------------------L 184 (284)
Q Consensus 157 ~--~sK~l~~-G~p~gav~~~~----------------------------~i~~~~~~---------------------l 184 (284)
+ ++|.+++ |.++|++++.+ ++.+.++. +
T Consensus 197 ~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l 276 (412)
T 2cb1_A 197 VESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGL 276 (412)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHG
T ss_pred EECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCC
Confidence 6 7899986 57888887644 33332211 1
Q ss_pred -------hhHHHHHHHHHHHHHhcc--------------------------CceeEEEEecccHHHHHHHHHHHHCCcEE
Q psy11784 185 -------DDNRPSGKYLVRPLGINL--------------------------HIFWCLILLSITYYLYRYTRRMKEAKIIV 231 (284)
Q Consensus 185 -------~~~~~~~~~l~~~L~~~~--------------------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~ 231 (284)
++..++.+++.+.|.+.. |.++.+.+ . ....+.+.+.+.|+++
T Consensus 277 ~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~---~~~~~~~~l~~~~i~~ 352 (412)
T 2cb1_A 277 ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G---DLERASRFLGAIRLLK 352 (412)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S---SHHHHHHHHHHCSSEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C---CHHHHHHHHHhCCeee
Confidence 233467778888887641 22455555 3 2345566666789887
Q ss_pred eecC----------C------------------CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 232 ANEG----------E------------------YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 232 ~~~~----------~------------------~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.++ + ..+.||++.....++++|+.+++.|++
T Consensus 353 -~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 353 -AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp -CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred -ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 431 1 147899999999999999999988864
No 170
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.62 E-value=4.1e-14 Score=133.77 Aligned_cols=192 Identities=14% Similarity=0.101 Sum_probs=125.4
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc-Ccccccc----c
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG-SHFWAFQ----T 148 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G-~~~~a~~----~ 148 (284)
+++|++.++.. +.++.+|++...++..|. .++.+.+++|.++|++||+++|+||+|..+...+ ..+..+. .
T Consensus 221 ~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~-~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~ 299 (500)
T 3tcm_A 221 TSDVKKQLEDARSRGINVRALVVINPGNPTGQ-VLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRS 299 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCCcc-cCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHH
Confidence 67788877632 224666665544555665 5688899999999999999999999999764322 1111211 1
Q ss_pred cCC-CC--c-EE--Eecccc-c-CCcceeEEEe---cHHHHHhchh-------------------h--------------
Q psy11784 149 QGA-VP--D-II--TVGKPM-G-NGMPIGAVIT---SRKIAESLNC-------------------L-------------- 184 (284)
Q Consensus 149 ~g~-~p--D-iv--~~sK~l-~-~G~p~gav~~---~~~i~~~~~~-------------------l-------------- 184 (284)
++. .. + ++ ++||++ | .|+++|++++ ++++++.+.. +
T Consensus 300 ~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 300 LGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp TTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred hccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 221 12 2 33 789999 4 4899999998 8888776543 1
Q ss_pred -------hhHHHHHHHHHHHHHhc---------cCceeEEEEe-cccH----------HHHHHH-HHHHHCCcEEeecCC
Q psy11784 185 -------DDNRPSGKYLVRPLGIN---------LHIFWCLILL-SITY----------YLYRYT-RRMKEAKIIVANEGE 236 (284)
Q Consensus 185 -------~~~~~~~~~l~~~L~~~---------~G~~~~i~~~-~~~~----------~~~~~~-~~l~~~Gv~~~~~~~ 236 (284)
++++++.+++.+.|+++ .|++.++.+. +... ....++ +.|.++||++.|+..
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 459 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSG 459 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcc
Confidence 13445556667777664 3444443332 1110 012233 455578999998754
Q ss_pred C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 237 Y-----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 237 ~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
+ .+.+|++.. .+++++++++++|.++++++.++
T Consensus 460 f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 460 FGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp TCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 347999866 89999999999999999887654
No 171
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.62 E-value=1.2e-14 Score=129.55 Aligned_cols=217 Identities=12% Similarity=0.015 Sum_probs=139.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhc---CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD---ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+++.. .....+|+....+||+....... ..+. .+.++|.. + .
T Consensus 23 ~~a~~~~~~~~--~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~----------~~~~~~~~--------d---------~ 73 (331)
T 1pff_A 23 MGAIAASVWTF--LKAGDHLISDDCLYGCTHALFEHQLRKFGV----------EVDFIDMA--------V---------P 73 (331)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEESCCCHHHHHHHHTHHHHTTC----------EEEEECTT--------S---------T
T ss_pred HHHHHHHHHHh--cCCCCEEEEcCCCcchHHHHHHHHHHhcCC----------EEEEeCCC--------C---------H
Confidence 36777777754 22335688888888886544322 1111 01222221 1 3
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH-hCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE-IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~-~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++++.++ +++++|+++++++..|.+.+ +++|.++|++ ||+++|+||+|+.+ .... .. .++ +|++
T Consensus 74 ~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~~-~~~~-~~---~~~--~d~~ 139 (331)
T 1pff_A 74 GNIEKHLK---PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASP-ILTN-PL---DLG--VDIV 139 (331)
T ss_dssp THHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHH-HHCC-GG---GGT--CSEE
T ss_pred HHHHHhhc---CCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCccc-ccCC-hh---hcC--CcEE
Confidence 55666554 46899999999999998886 9999999999 99999999999732 2221 11 233 5555
Q ss_pred --EecccccC-Ccc-eeEEEecH-HHHHhchh---------------------hh-------hHHHHHHHHHHHHHhc--
Q psy11784 157 --TVGKPMGN-GMP-IGAVITSR-KIAESLNC---------------------LD-------DNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 157 --~~sK~l~~-G~p-~gav~~~~-~i~~~~~~---------------------l~-------~~~~~~~~l~~~L~~~-- 201 (284)
+++|.+++ |.+ .|++++++ ++++.+.. ++ +..+..+.+.+.|++.
T Consensus 140 ~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 219 (331)
T 1pff_A 140 VHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKA 219 (331)
T ss_dssp EEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 68999986 577 78999998 87665422 11 1122233333333221
Q ss_pred ------------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC----------------------
Q psy11784 202 ------------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG---------------------- 235 (284)
Q Consensus 202 ------------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------------------- 235 (284)
.|.++.+.+. ....+.+.|.++||++++.+
T Consensus 220 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~ 295 (331)
T 1pff_A 220 VKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKE 295 (331)
T ss_dssp CCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHH
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHH
Confidence 2446666663 24567777888999775431
Q ss_pred ------CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 236 ------EYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 236 ------~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
...+.+|++++...|+++++.+++.|+++
T Consensus 296 ~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 296 EREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 11479999999999999999999988754
No 172
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.61 E-value=1.5e-14 Score=130.33 Aligned_cols=233 Identities=14% Similarity=0.086 Sum_probs=147.9
Q ss_pred CcHHHHHHHHHHHc--cCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAY--TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~--~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
++|++.|++..... .....|+.....|++.......+..... .+..+|.... +.-| .+
T Consensus 70 ~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~--------~~~~v~~~~~----~~~d--------~~ 129 (382)
T 4hvk_A 70 TEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGF--------EVEYIPVGKY----GEVD--------VS 129 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTC--------EEEEECBCTT----SCBC--------HH
T ss_pred hHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCC--------EEEEeccCCC----CCcC--------HH
Confidence 36777787765421 2345677777777775543322110000 0122332211 1111 57
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE-
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT- 157 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~- 157 (284)
+|++.+. +++++|++++.++..|...+ +++|.++|++||+ +|+||+|+ +|.. .+..... .+|+++
T Consensus 130 ~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~-~~~~---~~~~~~~--~~d~~~~ 195 (382)
T 4hvk_A 130 FIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS-VGQI---EVDVEKI--GADMLTI 195 (382)
T ss_dssp HHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT-BTTB---CCCHHHH--TCSEEEE
T ss_pred HHHHHhc---cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh-cCCC---CCCchhc--CCCEEEE
Confidence 7777664 46889999999999998877 9999999999999 99999996 3221 1222222 357765
Q ss_pred -ecccccCCcceeEEEecHHH--HHhch---------h-------------------------hhhHHHHHHHHHHHHHh
Q psy11784 158 -VGKPMGNGMPIGAVITSRKI--AESLN---------C-------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 158 -~sK~l~~G~p~gav~~~~~i--~~~~~---------~-------------------------l~~~~~~~~~l~~~L~~ 200 (284)
++|.++ +.++|+++++++. ...+. . .++.+++.+++.+.|++
T Consensus 196 s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4hvk_A 196 SSNDIYG-PKGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp ESGGGTS-CTTCEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eHHHhcC-CCceEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 459643 3347888776542 00000 0 23566677777777776
Q ss_pred cc------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC---------------------CCEEEEEcCC
Q psy11784 201 NL------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY---------------------GNVLLFLPAM 247 (284)
Q Consensus 201 ~~------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---------------------~~~lr~~p~l 247 (284)
+. +.++.+.+. ......+.+.|.++||.+.++... .+.+|+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~ 352 (382)
T 4hvk_A 275 IEESYLNGHPEKRLPNNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGR 352 (382)
T ss_dssp STTEEECSCSSSBCTTEEEEEET--TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCT
T ss_pred CCCeEEeCCccccCCCEEEEEEC--CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCC
Confidence 41 123444442 224677889999999999865311 4789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.+|++|+++++++|+++++++.+
T Consensus 353 ~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 353 YNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988764
No 173
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.61 E-value=1e-13 Score=131.50 Aligned_cols=186 Identities=17% Similarity=0.185 Sum_probs=128.3
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.++.. +..+++|++....+..|.+.+ +++|.++|++||+++++|++|+++..... .+.....++ .
T Consensus 243 ~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~g~~l~vD~a~~~~~~~~~-~~~~~~~g~~~ 317 (515)
T 2jis_A 243 PEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEAIADVCQRHGLWLHVDAAWGGSVLLSQ-THRHLLDGIQR 317 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTTGGG
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHHHHHHHHHcCCeEEEehhhhhHHHhCh-hhHhhcCCCcc
Confidence 67788887632 224889999887778888777 99999999999999999999997755433 233334455 7
Q ss_pred CcEEEe--cccccCCcceeEEEecHH--HHHh--------c----h-------------h--------------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK--IAES--------L----N-------------C-------------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~--i~~~--------~----~-------------~-------------------- 183 (284)
+|++++ .|.+++++++|+++++++ +++. + . +
T Consensus 318 aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~ 397 (515)
T 2jis_A 318 ADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQ 397 (515)
T ss_dssp CSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHH
Confidence 899988 799987778999999866 5432 1 0 0
Q ss_pred -----hhhHHHHHHHHHHHHHhccC---------ceeEEEEecc--------cHH-------HHHHHHHHHHCCcEEee-
Q psy11784 184 -----LDDNRPSGKYLVRPLGINLH---------IFWCLILLSI--------TYY-------LYRYTRRMKEAKIIVAN- 233 (284)
Q Consensus 184 -----l~~~~~~~~~l~~~L~~~~G---------~~~~i~~~~~--------~~~-------~~~~~~~l~~~Gv~~~~- 233 (284)
.++..++++++.+.|+++.| ..+.+...+. ... ...+.+.+.++|++...
T Consensus 398 g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~ 477 (515)
T 2jis_A 398 GLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGY 477 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 23566677788888876511 1223322221 011 12367788888976532
Q ss_pred c--CCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHH
Q psy11784 234 E--GEYGNVLLFLP-AMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 234 ~--~~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~ 267 (284)
. ....+.+|+++ +...|++||++++++|++++++
T Consensus 478 ~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 478 QPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp EEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 11136899999 8889999999999999887643
No 174
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.61 E-value=1.5e-14 Score=137.81 Aligned_cols=187 Identities=12% Similarity=0.077 Sum_probs=123.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHH-HhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIH-EIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~-~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++|++.+. +++.+|++...++..|. .++.+.+++|.++|+ +||+++|+||+|.+|...+. .......+....+
T Consensus 234 ~~~l~~~l~---~~~k~v~l~~p~NPtG~-~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~i~~ 308 (533)
T 3f6t_A 234 PNEIEKLKD---PSIKALIVVNPTNPTSK-EFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK-SIYSVVPYNTMLV 308 (533)
T ss_dssp HHHHHHHSC---TTEEEEEEESSCTTTCB-CCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC-CHHHHSGGGEEEE
T ss_pred HHHHHHHhC---CCCeEEEEeCCCCCCcc-ccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc-CHhhcCCCCEEEE
Confidence 567777664 46777777655666675 458888999999999 69999999999998865433 1222222334556
Q ss_pred EEeccccc-CCcceeEEEecHH-----HHHhc--------------------------------hh--------------
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRK-----IAESL--------------------------------NC-------------- 183 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~-----i~~~~--------------------------------~~-------------- 183 (284)
.+|||.+| .|+++|+++++++ +++.+ ..
T Consensus 309 ~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q 388 (533)
T 3f6t_A 309 YSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQ 388 (533)
T ss_dssp EESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHH
T ss_pred ecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHH
Confidence 68999998 6899999999876 43322 00
Q ss_pred ----------h-----------------hhHHHHHHHHHHHHHhc--------cCceeEEEEecc-----c---------
Q psy11784 184 ----------L-----------------DDNRPSGKYLVRPLGIN--------LHIFWCLILLSI-----T--------- 214 (284)
Q Consensus 184 ----------l-----------------~~~~~~~~~l~~~L~~~--------~G~~~~i~~~~~-----~--------- 214 (284)
+ ++++++.+++.+.|. + .|++..+++... .
T Consensus 389 ~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~ 467 (533)
T 3f6t_A 389 IMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTN 467 (533)
T ss_dssp HHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhc
Confidence 1 123333444444443 2 344555554210 0
Q ss_pred -HHHHHHHHHHH-HCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 215 -YYLYRYTRRMK-EAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 215 -~~~~~~~~~l~-~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
....+++..++ ++||++.|+.. ..+++|++.. .++++++++++++|.++++++.+
T Consensus 468 ~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 468 NFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHHHHHH
Confidence 12335555555 78999987643 2478999753 36999999999999999988754
No 175
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.61 E-value=2.4e-14 Score=130.31 Aligned_cols=228 Identities=13% Similarity=0.093 Sum_probs=144.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++..+ .....+|++...+|++....+.. .+.. +..+|.... .+..| .+++
T Consensus 64 t~al~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~-~g~~----------~~~v~~~~~---~~~~d--------~~~l 120 (393)
T 1mdo_A 64 TAGMHIALMALG-IGEGDEVITPSMTWVSTLNMIVL-LGAN----------PVMVDVDRD---TLMVT--------PEHI 120 (393)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEESSSCHHHHHHHHH-TTCE----------EEEECBCTT---TCCBC--------HHHH
T ss_pred HHHHHHHHHHcC-CCCCCEEEeCCCccHhHHHHHHH-CCCE----------EEEEeccCC---cCCCC--------HHHH
Confidence 367777777653 22345788888888886543322 1111 112232110 01111 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.++ +++++|++.+.. |...+ +++|.++|++||+++|+||+|+ |+...|. . .+. +|++++|
T Consensus 121 ~~~l~---~~~~~v~~~~~~---G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~-----~~~-~d~~~~S 183 (393)
T 1mdo_A 121 EAAIT---PQTKAIIPVHYA---GAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGR-H-----IGA-RGTAIFS 183 (393)
T ss_dssp HHHCC---TTEEEECCBCGG---GCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTE-E-----TTS-SSEEEEE
T ss_pred HHhcC---CCceEEEEeCCC---CCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCe-e-----cCC-CCeEEEe
Confidence 77765 368888887744 44443 9999999999999999999998 4433343 1 223 8998877
Q ss_pred ----ccccCCcceeEEEec-HHHHHhchh---------------------------------------------------
Q psy11784 160 ----KPMGNGMPIGAVITS-RKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 160 ----K~l~~G~p~gav~~~-~~i~~~~~~--------------------------------------------------- 183 (284)
|++++| ..|+++++ +++++.+..
T Consensus 184 ~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~ 262 (393)
T 1mdo_A 184 FHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDAL 262 (393)
T ss_dssp CCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHH
T ss_pred CCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHH
Confidence 999876 67888886 666543210
Q ss_pred hhhHHHHHHHHHHHHHhc----c----------CceeEEEEecc--cHHHHHHHHHHHHCCcEEeecCCC----------
Q psy11784 184 LDDNRPSGKYLVRPLGIN----L----------HIFWCLILLSI--TYYLYRYTRRMKEAKIIVANEGEY---------- 237 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~----~----------G~~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~~---------- 237 (284)
.++.+++.+++.+.|+++ . +.++++.+.+. .....++.+.|.++||.+.++...
T Consensus 263 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~ 342 (393)
T 1mdo_A 263 NARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRER 342 (393)
T ss_dssp HHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhcc
Confidence 224445566677777663 0 11344444210 234678999999999999864311
Q ss_pred -------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 238 -------------GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 238 -------------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.+|+.+...+|++|+++++++|+++++...
T Consensus 343 ~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 343 FPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp STTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred CCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 23799988888999999999999998876553
No 176
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.60 E-value=1.1e-14 Score=134.89 Aligned_cols=135 Identities=18% Similarity=0.072 Sum_probs=96.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEc-cCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVI-PFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++.. ......||+...+||+.......... . .+ ..+.++ +. .+ .++
T Consensus 83 t~A~~~~l~~~--~~~gd~vi~~~~~~~~~~~~~~~~~~---~--~g--~~~~~~~~~--------~d---------~~~ 136 (421)
T 2ctz_A 83 HAAQFLALTTL--AQAGDNIVSTPNLYGGTFNQFKVTLK---R--LG--IEVRFTSRE--------ER---------PEE 136 (421)
T ss_dssp HHHHHHHHHHH--CCTTCEEEECSCCCHHHHHHHHTHHH---H--TT--CEEEECCTT--------CC---------HHH
T ss_pred HHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHH---H--cC--CEEEEECCC--------CC---------HHH
Confidence 36788888865 34557899999999997655422100 0 00 011223 21 11 677
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--E
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--T 157 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~ 157 (284)
+++.++ +++++|++|++++..|.+.+ +++|.++|++||+++|+||+|+++|..+. .+ +..+|++ +
T Consensus 137 l~~~i~---~~~~~v~~~~~~n~~G~~~~----l~~i~~~a~~~g~~livD~~~~~~g~~~~-~~-----~~~~Di~~~s 203 (421)
T 2ctz_A 137 FLALTD---EKTRAWWVESIGNPALNIPD----LEALAQAAREKGVALIVDNTFGMGGYLLR-PL-----AWGAALVTHS 203 (421)
T ss_dssp HHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGGGGTSCC-GG-----GGTCSEEEEE
T ss_pred HHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccccccCC-cc-----ccCCeEEEEC
Confidence 777775 46899999999999998877 99999999999999999999976766554 22 2348988 7
Q ss_pred ecccccC-CcceeEEEec
Q psy11784 158 VGKPMGN-GMPIGAVITS 174 (284)
Q Consensus 158 ~sK~l~~-G~p~gav~~~ 174 (284)
++|++++ |.++|+++++
T Consensus 204 ~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 204 LTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp TTTTTTCSSCCCCEEEEE
T ss_pred CcccccCCCCcEEEEEEe
Confidence 8899997 6788877774
No 177
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.60 E-value=1.1e-14 Score=133.97 Aligned_cols=174 Identities=11% Similarity=0.049 Sum_probs=113.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++++|++|++++..|.+.+ +++|+++|++||++||+||+|+.. ... ....+|..+.+.
T Consensus 142 ~~~l~~~i~---~~~~~v~~e~~~np~G~~~~----l~~i~~la~~~g~~livDe~~~~~-~~~----~~~~~g~div~~ 209 (400)
T 3nmy_A 142 PAAFKAAIR---ADTKMVWIETPTNPMLKLVD----IAAIAVIARKHGLLTVVDNTFASP-MLQ----RPLSLGADLVVH 209 (400)
T ss_dssp HHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTHH-HHC----CGGGGTCSEEEE
T ss_pred HHHHHHHhc---cCCCEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-ccC----ChhhcCCcEEEe
Confidence 677777764 56899999999999998886 999999999999999999999621 111 112234444445
Q ss_pred EecccccCC-cceeE--EEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 TVGKPMGNG-MPIGA--VIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 ~~sK~l~~G-~p~ga--v~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+++|.++|+ .++|+ ++. ++++++.+.. +++..++.+++.+.|++.
T Consensus 210 S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 289 (400)
T 3nmy_A 210 SATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIE 289 (400)
T ss_dssp ETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred cCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 689999974 66655 443 6677666543 234455666677776653
Q ss_pred ----------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec-------------------------
Q psy11784 202 ----------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE------------------------- 234 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~------------------------- 234 (284)
.|.|+++++.+..+.+.++.+.+.-.++.+..+
T Consensus 290 ~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~ 369 (400)
T 3nmy_A 290 KVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQL 369 (400)
T ss_dssp EEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHH
T ss_pred EEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhc
Confidence 378999999533345666777665333222211
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 235 GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 235 ~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+...+.+|++..+- +.+.+++.|+++++
T Consensus 370 gi~~~liRlsvGle----~~~dli~dl~~al~ 397 (400)
T 3nmy_A 370 GISDALVRLSVGIE----DLGDLRGDLERALV 397 (400)
T ss_dssp TCCTTEEEEECCSS----CHHHHHHHHHHHHC
T ss_pred CCCcCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence 11246788865554 45555566666654
No 178
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.59 E-value=9.9e-14 Score=129.23 Aligned_cols=236 Identities=11% Similarity=0.116 Sum_probs=144.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhc---CCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD---ISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+..+...+.....|++..-+|++....+.. ..+.. +..+|..+.- ..+.-| +
T Consensus 129 t~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~----------v~~~~~~~~~-~~~~~d--------~ 189 (448)
T 3meb_A 129 TGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVP----------YKEYTYLRKD-GELEID--------F 189 (448)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSC----------CEEECCBCTT-SCSSBC--------H
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCe----------EEEEeccccc-cCCCcC--------H
Confidence 356777666666555556788888888775443330 11111 1122321110 011112 6
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--cccccccc-CCCCc
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQTQ-GAVPD 154 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~~~-g~~pD 154 (284)
+.+++.++..+.+...+++...++..|. .++.+.+++|.++|++||+++|+||+|.+|+..+. ..+....+ +..++
T Consensus 190 e~l~~~l~~~~~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 268 (448)
T 3meb_A 190 SNTKKDIQSAPEKSIFLFHACAHNPSGI-DFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVE 268 (448)
T ss_dssp HHHHHHHHHSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCc
Confidence 7888888755445666666655776776 46888999999999999999999999999875441 01222221 23345
Q ss_pred ---EEEeccccc-CCcceeEE--Ee--------c-H----HHHHhchh--------------------h-----------
Q psy11784 155 ---IITVGKPMG-NGMPIGAV--IT--------S-R----KIAESLNC--------------------L----------- 184 (284)
Q Consensus 155 ---iv~~sK~l~-~G~p~gav--~~--------~-~----~i~~~~~~--------------------l----------- 184 (284)
+.++||.++ .|+++|++ ++ + + ++.+.+.. +
T Consensus 269 ~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~ 348 (448)
T 3meb_A 269 VLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYD 348 (448)
T ss_dssp EEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHH
T ss_pred EEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHH
Confidence 457899998 58999998 66 3 4 45444332 1
Q ss_pred ------hhHHHHHHHHHHHHHhc--cC---------------ceeEEEEecccHHHHHHHHHH-HHCCcEEeecCCCCCE
Q psy11784 185 ------DDNRPSGKYLVRPLGIN--LH---------------IFWCLILLSITYYLYRYTRRM-KEAKIIVANEGEYGNV 240 (284)
Q Consensus 185 ------~~~~~~~~~l~~~L~~~--~G---------------~~~~i~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~ 240 (284)
++++++.+++.+.|+++ .| ++..+.+ ..+++..+ .++||++.++.
T Consensus 349 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~ll~~~gV~v~~G~----- 417 (448)
T 3meb_A 349 NVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL------TPEHVDYLKEKWSIYLVKAG----- 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC------CHHHHHHHHHHHCEEECSGG-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCC------CHHHHHHHHHhCCEEEeCCC-----
Confidence 13445566666666653 11 1222222 13455555 46799998743
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 241 LLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 241 lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|++.. .+++++|++++++|.++++++
T Consensus 418 gRis~a-~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 418 GRMSMC-GLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp GEEEGG-GCCTTTHHHHHHHHHHHHHHS
T ss_pred cEEEEe-cCCHHHHHHHHHHHHHHHHhc
Confidence 277653 347888999999999998743
No 179
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.58 E-value=3.7e-13 Score=127.17 Aligned_cols=187 Identities=13% Similarity=0.086 Sum_probs=125.6
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.++.. +..+++|++.......|.+.+ +++|.++|++||+++++|++|.|+..... .+.....++ .
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~g~~lhvD~a~~~~~~~~~-~~~~~~~g~~~ 303 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNGIER 303 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTTGGG
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEehhhhhHHHhCH-hhHhhcCCccc
Confidence 67788887632 224788888776777787766 99999999999999999999987643222 122223344 5
Q ss_pred CcEEEec--ccccCCcceeEEEecH-HHHHh--------ch------------------------h--------------
Q psy11784 153 PDIITVG--KPMGNGMPIGAVITSR-KIAES--------LN------------------------C-------------- 183 (284)
Q Consensus 153 pDiv~~s--K~l~~G~p~gav~~~~-~i~~~--------~~------------------------~-------------- 183 (284)
+|+++++ |.+++++++|++++++ ++++. +. .
T Consensus 304 ~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g 383 (504)
T 2okj_A 304 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVG 383 (504)
T ss_dssp CSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHH
T ss_pred CCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHH
Confidence 8999886 9988778899999976 45431 10 0
Q ss_pred ----hhhHHHHHHHHHHHHHhccC-----------ceeEEEEeccc---------------HHHHHHHHHHHHCCcEE-e
Q psy11784 184 ----LDDNRPSGKYLVRPLGINLH-----------IFWCLILLSIT---------------YYLYRYTRRMKEAKIIV-A 232 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~~G-----------~~~~i~~~~~~---------------~~~~~~~~~l~~~Gv~~-~ 232 (284)
+++..++++++.+.|++..| .++.+...+.. .....+.+.|.++|+++ .
T Consensus 384 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~ 463 (504)
T 2okj_A 384 FENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG 463 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 23556677778888876411 12233332211 11457888999999643 3
Q ss_pred ecCCCC--CEEEEEcC-CCCCHHHHHHHHHHHHHHHHHH
Q psy11784 233 NEGEYG--NVLLFLPA-MCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 233 ~~~~~~--~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+....+ +++|+++. ..+|++||++++++|+++++++
T Consensus 464 ~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 464 YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred eeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 222222 58999984 7789999999999998887543
No 180
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.58 E-value=6e-14 Score=131.56 Aligned_cols=172 Identities=12% Similarity=0.119 Sum_probs=117.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++++|++++.++..|.+.+ +++|.++|++||+++|+||+|+. |.... ..+ ..+|++
T Consensus 207 ~~~l~~~i~---~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~-g~~~~---~~~---~~~div 272 (464)
T 1ibj_A 207 LDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMS-PVLSR---PLE---LGADIV 272 (464)
T ss_dssp HHHHHHHCC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTC-TTTCC---GGG---TTCSEE
T ss_pred HHHHHHHhc---cCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCcc-cccCC---hhh---cCCEEE
Confidence 577777764 56899999999999898876 99999999999999999999973 21111 112 346877
Q ss_pred --EecccccC--CcceeEEEecH-HHHHhchh--------------------hh----hH---HHHHHHHHHHHHh----
Q psy11784 157 --TVGKPMGN--GMPIGAVITSR-KIAESLNC--------------------LD----DN---RPSGKYLVRPLGI---- 200 (284)
Q Consensus 157 --~~sK~l~~--G~p~gav~~~~-~i~~~~~~--------------------l~----~~---~~~~~~l~~~L~~---- 200 (284)
+++|.+++ |+++|++++++ ++++.+.. ++ ++ .+....+.+.|++
T Consensus 273 ~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v 352 (464)
T 1ibj_A 273 MHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_dssp EEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred EECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 58899986 78999999984 77665433 10 01 1111222222221
Q ss_pred ----------c------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-----------------------
Q psy11784 201 ----------N------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG----------------------- 235 (284)
Q Consensus 201 ----------~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------------------- 235 (284)
+ .|.++++++. .......+.+.|...|+.+..+.
T Consensus 353 ~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~ 431 (464)
T 1ibj_A 353 KKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREA 431 (464)
T ss_dssp CEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSS
T ss_pred eEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHh
Confidence 0 2457777773 22234567788777777776543
Q ss_pred --CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 236 --EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 236 --~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...+.+|+++++ +++++++++|++++++
T Consensus 432 ~g~~~~~iRlsvg~----edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 432 RGLTEDLVRISAGI----EDVDDLISDLDIAFKT 461 (464)
T ss_dssp SSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred cCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence 113689999887 8999999999998764
No 181
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.57 E-value=1.5e-13 Score=126.78 Aligned_cols=226 Identities=13% Similarity=0.082 Sum_probs=141.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++..+ .| .+|++...+||+....+... +.. +..+|... ..+.-| .++|
T Consensus 77 t~al~~~l~~l~--~g-d~Vlv~~~~~~~~~~~~~~~-G~~----------~~~v~~~~---~~~~~d--------~~~l 131 (424)
T 2po3_A 77 TAGLQLLAHAAG--LT-GEVIMPSMTFAATPHALRWI-GLT----------PVFADIDP---DTGNLD--------PDQV 131 (424)
T ss_dssp HHHHHHHHHHHT--CC-SEEEEESSSCTHHHHHHHHT-TCE----------EEEECBCT---TTSSBC--------HHHH
T ss_pred HHHHHHHHHHcC--CC-CEEEECCCccHHHHHHHHHc-CCE----------EEEEecCC---CcCCcC--------HHHH
Confidence 467888888764 34 67899999999876543321 111 11222211 011111 5666
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.++ +++++|++.+ ..|... .+++|.++|++||+++|+||+|+ |+...|. . .+..+|++++|
T Consensus 132 ~~~i~---~~~~~v~~~~---~tG~~~----~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~-----~~~~~di~~~S 195 (424)
T 2po3_A 132 AAAVT---PRTSAVVGVH---LWGRPC----AADQLRKVADEHGLRLYFDAAHALGCAVDGR-P-----AGSLGDAEVFS 195 (424)
T ss_dssp GGGCC---TTEEEEEEEC---GGGCCC----CHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E-----TTSSSSEEEEE
T ss_pred HHhhC---cCCcEEEEEC---CCCCcC----CHHHHHHHHHHcCCEEEEECccccCCeECCe-e-----cccccCEEEEe
Confidence 66554 3577777643 244433 49999999999999999999999 7765453 1 12236887666
Q ss_pred ----ccccCCcceeEEEec-HHHHHhchh---------------------------------------hhhHHHHHHHHH
Q psy11784 160 ----KPMGNGMPIGAVITS-RKIAESLNC---------------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 160 ----K~l~~G~p~gav~~~-~~i~~~~~~---------------------------------------l~~~~~~~~~l~ 195 (284)
|++++ .++|+++++ +++++.+.. .++.+++.+++.
T Consensus 196 ~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~ 274 (424)
T 2po3_A 196 FHATKAVNA-FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYR 274 (424)
T ss_dssp CCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887 588999998 777554321 123344445555
Q ss_pred HHHHhc---------cC-----ceeEEEEecc---cHHHHHHHHHHHHCCcEEeecCC-C---------------CC---
Q psy11784 196 RPLGIN---------LH-----IFWCLILLSI---TYYLYRYTRRMKEAKIIVANEGE-Y---------------GN--- 239 (284)
Q Consensus 196 ~~L~~~---------~G-----~~~~i~~~~~---~~~~~~~~~~l~~~Gv~~~~~~~-~---------------~~--- 239 (284)
+.|+++ .| .++.+.+ +. .....++.+.|.++||.+.+... . .+
T Consensus 275 ~~L~~~~g~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r 353 (424)
T 2po3_A 275 EHLADLPGVLVADHDRHGLNNHQYVIVEI-DEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTER 353 (424)
T ss_dssp HHTCSCTTEEECCGGGGSCCCCCCEEEEE-CHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHH
T ss_pred HHhccCCCccccCCCCCCccccEEEEEEE-CCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHH
Confidence 565542 11 2334444 21 12467788899999999976211 0 01
Q ss_pred ----EEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 240 ----VLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 240 ----~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+|+.....+|++|+++++++|.++++...
T Consensus 354 ~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 354 LAARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp HHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 166655588999999999999999987653
No 182
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.57 E-value=1.1e-13 Score=124.77 Aligned_cols=228 Identities=13% Similarity=0.154 Sum_probs=141.1
Q ss_pred CcHHHHHHHHHHH-ccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARA-YTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~-~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++|++.|++..+. .....+|+....+||+....+... +.. +.++|.... . .-| .++
T Consensus 57 t~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~----------~~~~~~~~~--~--~~d--------~~~ 113 (375)
T 2fnu_A 57 TSALLTLYRNFSEFSADRNEIITTPISFVATANMLLES-GYT----------PVFAGIKND--G--NID--------ELA 113 (375)
T ss_dssp HHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHT-TCE----------EEECCBCTT--S--SBC--------GGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHC-CCE----------EEEeccCCC--C--CCC--------HHH
Confidence 3677788877642 223357888888888865543321 111 112222110 0 011 345
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--E
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--T 157 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~ 157 (284)
+++.+. +++++|++... .|...+ +++|.++|++||+++|+||+|+. |.... ....+..+|++ +
T Consensus 114 l~~~i~---~~~~~v~~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~~~~----~~~~~~~~~i~~~s 178 (375)
T 2fnu_A 114 LEKLIN---ERTKAIVSVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHAL-GSEYQ----NKKVGGFALASVFS 178 (375)
T ss_dssp SGGGCC---TTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCT-TCEET----TEETTSSSSEEEEE
T ss_pred HHhhcC---cCceEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECcccc-CCeEC----CeeccccCCeEEEe
Confidence 555543 35676554433 566655 89999999999999999999973 32211 12233334554 6
Q ss_pred ec--ccccCCcceeEEEec--HHHHHhch------------------------h-------------------hhhHHHH
Q psy11784 158 VG--KPMGNGMPIGAVITS--RKIAESLN------------------------C-------------------LDDNRPS 190 (284)
Q Consensus 158 ~s--K~l~~G~p~gav~~~--~~i~~~~~------------------------~-------------------l~~~~~~ 190 (284)
++ |.++.| +|+++++ +++++.+. . .++.+++
T Consensus 179 ~s~~K~~~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 256 (375)
T 2fnu_A 179 FHAIKPITTA--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEA 256 (375)
T ss_dssp CCTTSSSCCS--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCCcccc--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77 999654 6777774 55643210 0 2356677
Q ss_pred HHHHHHHHHhc-------c-------CceeEEEEecccH-HHHHHHHHHHHCCcEEeecC-C------C-----------
Q psy11784 191 GKYLVRPLGIN-------L-------HIFWCLILLSITY-YLYRYTRRMKEAKIIVANEG-E------Y----------- 237 (284)
Q Consensus 191 ~~~l~~~L~~~-------~-------G~~~~i~~~~~~~-~~~~~~~~l~~~Gv~~~~~~-~------~----------- 237 (284)
.+++.+.|+++ . +.++.+.+..... ....+.+.|.++||.+.... + +
T Consensus 257 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~ 336 (375)
T 2fnu_A 257 ALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKS 336 (375)
T ss_dssp HHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHH
T ss_pred HHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChH
Confidence 78888888764 1 1123455532112 57789999999999987210 0 0
Q ss_pred -----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 238 -----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 238 -----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+.+|+.++..+|++|+++++++|+++++++
T Consensus 337 ~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 337 AEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1579999988899999999999999988764
No 183
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.56 E-value=5.9e-15 Score=134.51 Aligned_cols=228 Identities=15% Similarity=0.124 Sum_probs=125.7
Q ss_pred CcHHHHHHHHHHHcc--CCc-cEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYT--GRQ-NIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~--~r~-~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
++|++.+++....++ ... .|+.....|++.......+..... .+..+|.... +.-| .
T Consensus 90 t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~--------~~~~v~~~~~----~~~d--------~ 149 (400)
T 3vax_A 90 TESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGF--------EVDFLTPGPS----GRIS--------V 149 (400)
T ss_dssp HHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTC--------EEEEECCCTT----CCCC--------H
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCC--------eEEEEccCCC----CCcC--------H
Confidence 367777777765321 223 677776667665433322210000 1222333211 1111 5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
++|++.+. +++++|+++++++..|...+ +++|.++|++||+++|+||+|+ +|... ...... +|+++
T Consensus 150 ~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~-~d~~~ 215 (400)
T 3vax_A 150 EGVMERLR---PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKVP-----GDLTTP-IDMIS 215 (400)
T ss_dssp HHHHTTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTSG-----GGGGSC-CSEEE
T ss_pred HHHHHhcC---CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCCC-----cChhhc-CcEEE
Confidence 66766654 46899999999999998877 8999999999999999999997 33221 122234 89887
Q ss_pred ec--ccccCCcceeEEE-ecH--------HHHHhch---------h-------------------------hhhHHHHHH
Q psy11784 158 VG--KPMGNGMPIGAVI-TSR--------KIAESLN---------C-------------------------LDDNRPSGK 192 (284)
Q Consensus 158 ~s--K~l~~G~p~gav~-~~~--------~i~~~~~---------~-------------------------l~~~~~~~~ 192 (284)
+| | +.|+.++|+++ +++ .+...+. . .++.+++.+
T Consensus 216 ~s~~K-~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 294 (400)
T 3vax_A 216 ISGHK-IGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRS 294 (400)
T ss_dssp EETGG-GTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred EeHHH-hCCCCceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 65 9 44434578888 765 1111110 0 235566677
Q ss_pred HHHHHHHhcc------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCC
Q psy11784 193 YLVRPLGINL------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGN 239 (284)
Q Consensus 193 ~l~~~L~~~~------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~ 239 (284)
++.+.|+ .. +.++.+.+. .....++.+.|. +||.+.++.. ..+
T Consensus 295 ~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 370 (400)
T 3vax_A 295 RLLAGLA-STSFQVNGDQDHVVPHILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASK 370 (400)
T ss_dssp HHHHHHT-TTTCEECSCTTSBCTTEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTS
T ss_pred HHHHhhC-CCCEEEeCCcccCCCCEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCc
Confidence 7777776 31 234444442 234677889999 9998876421 038
Q ss_pred EEEEEc-CCCCCHHHHHHHHHHHHHHHHH
Q psy11784 240 VLLFLP-AMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 240 ~lr~~p-~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+|+.+ +...|++++++++++|++++++
T Consensus 371 ~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 371 SLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEEEEEC--------------------
T ss_pred eEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 999999 8899999999999999887753
No 184
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.56 E-value=5.5e-13 Score=121.92 Aligned_cols=231 Identities=13% Similarity=0.127 Sum_probs=143.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++|++.+++..+. ....+|+....+||+....+.... .. +.++|..+ .+.-| .+++
T Consensus 57 t~al~~~~~~l~~-~~gd~Vl~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~----~~~~d--------~~~l 112 (394)
T 1o69_A 57 TAALHLALRVAGV-KQDDIVLASSFTFIASVAPICYLK-AK----------PVFIDCDE----TYNID--------VDLL 112 (394)
T ss_dssp HHHHHHHHHHTTC-CTTCEEEEESSSCGGGTHHHHHTT-CE----------EEEECBCT----TSSBC--------HHHH
T ss_pred HHHHHHHHHHcCC-CCCCEEEECCCccHHHHHHHHHcC-CE----------EEEEEeCC----CCCcC--------HHHH
Confidence 3567777766532 233568888888887655443211 10 11223221 11111 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEe-
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITV- 158 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~- 158 (284)
++.++..++++++|++++.. |.. ..+++|.++|++||+++|+||+|+ |+...|. ... .++ ..|+.++
T Consensus 113 ~~~i~~~~~~~~~v~~~~~~---G~~----~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~~-~~~~~s~s 181 (394)
T 1o69_A 113 KLAIKECEKKPKALILTHLY---GNA----AKMDEIVEICKENDIVLIEDAAEALGSFYKNK-ALG--TFG-EFGVYSYN 181 (394)
T ss_dssp HHHHHHCSSCCCEEEEECGG---GCC----CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT--SSS-SEEEEECC
T ss_pred HHHHhcccCCceEEEEECCC---CCh----hhHHHHHHHHHHcCCEEEEECcCcccceeCCc-ccc--ccc-CcEEEEEe
Confidence 88887433357888888843 333 449999999999999999999998 7644443 111 111 3688888
Q ss_pred -cccccCCcceeEEEec-HHHHHhchh-----------------------------------------hhhHHHHHHHHH
Q psy11784 159 -GKPMGNGMPIGAVITS-RKIAESLNC-----------------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 159 -sK~l~~G~p~gav~~~-~~i~~~~~~-----------------------------------------l~~~~~~~~~l~ 195 (284)
+|++++ ..+|+++++ +++++.+.. +++.+++.+++.
T Consensus 182 ~~K~l~~-~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 182 GNKIITT-SGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp TTSSSCC-SSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCccCCC-CCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588874 478999995 776554311 235566777777
Q ss_pred HHHHhc---c-------Cc--eeEEEEecc--------------------cHHHHHHHHHHHHCCcEEeecCC-------
Q psy11784 196 RPLGIN---L-------HI--FWCLILLSI--------------------TYYLYRYTRRMKEAKIIVANEGE------- 236 (284)
Q Consensus 196 ~~L~~~---~-------G~--~~~i~~~~~--------------------~~~~~~~~~~l~~~Gv~~~~~~~------- 236 (284)
+.|+++ . +. ++.+.+.+. ......+.+.|.++||.++++..
T Consensus 261 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~ 340 (394)
T 1o69_A 261 EFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEV 340 (394)
T ss_dssp HHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGG
T ss_pred HHhcccccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchh
Confidence 777652 1 12 234444211 12567899999999999986521
Q ss_pred CC---------------CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 237 YG---------------NVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 237 ~~---------------~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.. ..+++.....+|++|++.++++|+++++.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 341 FKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp GTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred hhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 00 23444445668999999999999887643
No 185
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.56 E-value=1.8e-13 Score=123.60 Aligned_cols=233 Identities=15% Similarity=0.111 Sum_probs=151.9
Q ss_pred CcHHHHHHHHHHHc--cCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAY--TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~--~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
++|++.+++..+.+ .....|++.+.+|++.......+..... .+..+|... ....| .+
T Consensus 70 t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~--------~~~~v~~~~----~~~~d--------~~ 129 (382)
T 4eb5_A 70 TEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGF--------EVEYIPVGK----YGEVD--------VS 129 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTC--------EEEEECBCT----TSCBC--------HH
T ss_pred HHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCc--------EEEEeccCC----CCccC--------HH
Confidence 46888888887622 2335788888888876544332111100 112233221 11111 56
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
+|++.++ +++.+|+++..++..|...+ +++|.++|++||++ |+||+|+ +|... +....+ .+|++++
T Consensus 130 ~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~---~~~~~~--~~di~~~ 195 (382)
T 4eb5_A 130 FIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE---VDVEKI--GADMLTI 195 (382)
T ss_dssp HHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC---CCHHHH--TCSEEEE
T ss_pred HHHHHhc---CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc---cCcccc--CCCEEEe
Confidence 7777664 35889999999999998876 89999999999999 9999997 54321 122222 4687754
Q ss_pred --cccccCCcceeEEEecHHH-HHh-c------hh----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 159 --GKPMGNGMPIGAVITSRKI-AES-L------NC----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 159 --sK~l~~G~p~gav~~~~~i-~~~-~------~~----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+|.++. ..+|+++++++. +.. + .. .++.+++.+++.+.|++
T Consensus 196 s~sK~~g~-~g~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4eb5_A 196 SSNDIYGP-KGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp ETGGGTCC-SSCEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ehHHhcCC-CceEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 697432 137888887663 111 0 00 22455566777777765
Q ss_pred c--------c----CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEEEcCC
Q psy11784 201 N--------L----HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLFLPAM 247 (284)
Q Consensus 201 ~--------~----G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~~p~l 247 (284)
+ . +.++.+.+ + .....++.+.|.++||.+.++.. ..+.+|+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~ 352 (382)
T 4eb5_A 275 IEESYLNGHPEKRLPNNVNVRF-S-YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGR 352 (382)
T ss_dssp STTEEECSCSSSBCTTEEEEEE-T-TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCT
T ss_pred CCCeEEeCCcccCCCCEEEEEe-C-CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCC
Confidence 4 1 33455555 2 22466788999999999987531 14689999888
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.+|++++++++++|+++++++.+
T Consensus 353 ~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 353 YNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999988764
No 186
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.56 E-value=6.2e-13 Score=125.66 Aligned_cols=192 Identities=11% Similarity=0.049 Sum_probs=126.2
Q ss_pred HHHHHHHHHhcCC--CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-cccccccc--CC
Q psy11784 77 AQAARNIMEAHRD--NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQTQ--GA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~--~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~~--g~ 151 (284)
+++|++.++.... ++.+|++...++..|. +++.+.+++|.++|++||+++|+||+|..+...+. .+..+... +.
T Consensus 220 ~~~le~~l~~~~~~~~~k~i~l~np~NPTG~-v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~ 298 (498)
T 3ihj_A 220 VNELRRAVQEAKDHCDPKVLCIINPGNPTGQ-VQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEM 298 (498)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCCeEEEEECCCCCCCC-cCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHh
Confidence 6788888874322 4677776655666665 56888999999999999999999999987633221 11111110 11
Q ss_pred C------Cc---EEEeccccc--CCcceeEEE---ecHHHHHhchh-------------------h--------------
Q psy11784 152 V------PD---IITVGKPMG--NGMPIGAVI---TSRKIAESLNC-------------------L-------------- 184 (284)
Q Consensus 152 ~------pD---iv~~sK~l~--~G~p~gav~---~~~~i~~~~~~-------------------l-------------- 184 (284)
. .. +.++||++. .|+++|+++ .++++++.+.. +
T Consensus 299 ~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~ 378 (498)
T 3ihj_A 299 GPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS 378 (498)
T ss_dssp CHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred cccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence 1 11 237899995 699999998 58888776543 1
Q ss_pred -------hhHHHHHHHHHHHHHhc---------cCceeEEEEe-ccc---------HHHHH--HHHHHHHCCcEEeecCC
Q psy11784 185 -------DDNRPSGKYLVRPLGIN---------LHIFWCLILL-SIT---------YYLYR--YTRRMKEAKIIVANEGE 236 (284)
Q Consensus 185 -------~~~~~~~~~l~~~L~~~---------~G~~~~i~~~-~~~---------~~~~~--~~~~l~~~Gv~~~~~~~ 236 (284)
++++++.+++.+.|+++ .|++.++.+. +.. ..... +.+.|.++||++.|+..
T Consensus 379 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~ 458 (498)
T 3ihj_A 379 REKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSG 458 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcc
Confidence 12345556666666654 3444444442 111 01223 23445578999998754
Q ss_pred C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 237 Y-----GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 237 ~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
+ .+++|++. ..+++++++++++|.++++++.++
T Consensus 459 f~~~~~~~~~Ris~--~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 459 FGQREGTYHFRMTI--LPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp TCCCTTCCBEEEEC--CSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEe--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 34899976 589999999999999999887654
No 187
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.55 E-value=3.3e-13 Score=125.85 Aligned_cols=173 Identities=13% Similarity=0.090 Sum_probs=120.9
Q ss_pred HHHHHHHHHhcCCCe-eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNI-ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~v-aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++. ++ ++|++|+..+..|.+.+ +++|.++|++||+++|+||+|+.+ ... ......+|+
T Consensus 189 ~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~-~~~------~~~~~g~Di 254 (445)
T 1qgn_A 189 VGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATP-LNQ------KALALGADL 254 (445)
T ss_dssp HHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCT-TTC------CTTTTTCSE
T ss_pred HHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc-ccC------CccccCCEE
Confidence 6788888872 44 89999999999998877 999999999999999999999732 111 223456898
Q ss_pred EE--ecccccCC--cceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 156 IT--VGKPMGNG--MPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 v~--~sK~l~~G--~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
++ ++|.++++ .++|++++++++++.+.. +++..++.+++.+.|++.
T Consensus 255 v~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 255 VLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp EEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred EEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 86 78999874 479999999988776543 123344556666777553
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-----------------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG----------------------- 235 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------------------- 235 (284)
.|.++++++......+..+...|...++.+..++
T Consensus 335 ~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~ 414 (445)
T 1qgn_A 335 RHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAK 414 (445)
T ss_dssp EEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHT
T ss_pred eEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHh
Confidence 1556777774322346667776653344322211
Q ss_pred --CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 236 --EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 236 --~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...+.||++.. .||+|.+++.|+++++.
T Consensus 415 ~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 415 YGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp TTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 12468999654 46899999999998864
No 188
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.55 E-value=6.8e-14 Score=127.47 Aligned_cols=223 Identities=14% Similarity=0.153 Sum_probs=142.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++.++. ....+|++...+||+....+..... . +.++|... ..+.-| .+++
T Consensus 81 t~al~~~l~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~-~----------~~~~~~~~---~~~~~d--------~~~l 137 (391)
T 3dr4_A 81 TTALHLALVAMGI-GPGDEVIVPSLTYIASANSVTYCGA-T----------PVLVDNDP---RTFNLD--------AAKL 137 (391)
T ss_dssp HHHHHHHHHHHTC-CTTCEEEEESSSCTHHHHHHHHTTC-E----------EEEECBCT---TTCSBC--------GGGS
T ss_pred HHHHHHHHHHcCC-CCcCEEEECCCchHHHHHHHHHCCC-E----------EEEEecCc---cccCcC--------HHHH
Confidence 4688888887743 2346789999999987655443211 1 11222210 001111 3455
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.++ +++++|++.. ..|...+ +++|.++|++||+++|+||+|+ |....+ ...+..+|++++|
T Consensus 138 ~~~~~---~~~~~v~~~n---~tG~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~------~~~~~~~di~~~S 201 (391)
T 3dr4_A 138 EALIT---PRTKAIMPVH---LYGQICD----MDPILEVARRHNLLVIEDAAEAVGATYRG------KKSGSLGDCATFS 201 (391)
T ss_dssp GGGCC---TTEEEECCBC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETT------EETTSSSSEEEEE
T ss_pred HHhcC---CCceEEEEEC---CCCChhh----HHHHHHHHHHcCCEEEEECcccccceECC------eeecccCCEEEEE
Confidence 55443 4677887543 3454444 9999999999999999999997 221112 2334457888888
Q ss_pred ----ccccCCcceeEEEec-HHHHHhchh-----------------------------------------hhhHHHHHHH
Q psy11784 160 ----KPMGNGMPIGAVITS-RKIAESLNC-----------------------------------------LDDNRPSGKY 193 (284)
Q Consensus 160 ----K~l~~G~p~gav~~~-~~i~~~~~~-----------------------------------------l~~~~~~~~~ 193 (284)
|++++| ..|+++++ +++.+.+.. .++.+++.++
T Consensus 202 ~s~~K~l~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~ 280 (391)
T 3dr4_A 202 FFGNAIITTG-EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGW 280 (391)
T ss_dssp CBTTSSSCCB-SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCCcCCcC-CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 46777775 445433210 2356667777
Q ss_pred HHHHHHhccCc----------------eeEEEEecc--cHHHHHHHHHHHHCCcEEeecCC-------------------
Q psy11784 194 LVRPLGINLHI----------------FWCLILLSI--TYYLYRYTRRMKEAKIIVANEGE------------------- 236 (284)
Q Consensus 194 l~~~L~~~~G~----------------~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~------------------- 236 (284)
+.+.|+++ |+ ++.+.+ +. .....++.+.|.++||.+.++..
T Consensus 281 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~ 358 (391)
T 3dr4_A 281 YEQKLARL-GNRVTKPHVALTGRHVFWMYTVRL-GEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIA 358 (391)
T ss_dssp HHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEE-CSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHH
T ss_pred HHHHhhcC-CccccCcCCCCCCcceeEEEEEEE-CCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHH
Confidence 88888764 22 223444 22 23467899999999999986520
Q ss_pred ---CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 237 ---YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 237 ---~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
..+.+|+.++..+|++||++++++|++++
T Consensus 359 ~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 359 EACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 12578999899999999999999997653
No 189
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.54 E-value=3.3e-13 Score=123.26 Aligned_cols=231 Identities=15% Similarity=0.162 Sum_probs=138.7
Q ss_pred CcHHHHHHHHHHHccC-CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTG-RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~-r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||+..+++..+.+.+ ...|+...-+|++....+.... .. +..+|..+. ..+.-| ++.
T Consensus 106 ~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g-~~----------~~~~~~~~~--~~~~~d--------~~~ 164 (401)
T 7aat_A 106 TGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAG-LQ----------LQAYRYYDP--KTCSLD--------FTG 164 (401)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTT-CE----------EEEEECEET--TTTEEC--------HHH
T ss_pred hHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcC-Ce----------eEeeeeecc--ccCccC--------HHH
Confidence 3677777776665443 3567777777776544332221 11 111222110 001111 566
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--ccccccc-cCCCCcE-
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQT-QGAVPDI- 155 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~~-~g~~pDi- 155 (284)
+++.+++..+++.++++...++..|. ..+.+.+++|.++|++||+++|+||+|.+|+..+. ..+.... .+..+++
T Consensus 165 l~~~l~~~~~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (401)
T 7aat_A 165 AMEDISKIPEKSIILLHACAHNPTGV-DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVV 243 (401)
T ss_dssp HHHHHTTSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred HHHHHHhCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEE
Confidence 66667654456788888888887776 46889999999999999999999999998865431 0122221 1233443
Q ss_pred --EEeccccc-CCcceeEEEe---cHH----HHHhchh--------------------h-----------------hhHH
Q psy11784 156 --ITVGKPMG-NGMPIGAVIT---SRK----IAESLNC--------------------L-----------------DDNR 188 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~---~~~----i~~~~~~--------------------l-----------------~~~~ 188 (284)
.++||.++ .|+++|++++ +++ +.+.+.. + ++++
T Consensus 244 ~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 323 (401)
T 7aat_A 244 LSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRII 323 (401)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 57899998 6899999886 554 2222221 1 1344
Q ss_pred HHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHH
Q psy11784 189 PSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 189 ~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~ 256 (284)
++.+++.+.|+++ .|++.++.+. ...+...+.++||.+.++ +|++.+. +++++|++
T Consensus 324 ~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~gi~v~~~------~Ris~~~-~~~~~i~~ 391 (401)
T 7aat_A 324 SMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-----PEQVERLTKEFSIYMTKD------GRISVAG-VASSNVGY 391 (401)
T ss_dssp HHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-----HHHHHHHHHhCCEeccCC------CeEEecc-CChhhHHH
Confidence 4555666666553 2333333221 233333345779999742 5777653 46666999
Q ss_pred HHHHHHHHH
Q psy11784 257 IVSTLNRIF 265 (284)
Q Consensus 257 ~~~~l~~~l 265 (284)
++++|.+++
T Consensus 392 ~~~~l~~~~ 400 (401)
T 7aat_A 392 LAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998775
No 190
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.53 E-value=8.9e-14 Score=125.93 Aligned_cols=224 Identities=13% Similarity=0.173 Sum_probs=134.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCC-CCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP-DTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|+|++.|++..+.- ...+|++...+||+....+.... .. +.+++.. +. +.-| .++
T Consensus 61 t~al~~~l~~l~~~-~gd~Vi~~~~~~~~~~~~~~~~g-~~----------~~~~~~~~~~----~~~d--------~~~ 116 (373)
T 3frk_A 61 LDALHLILKGYDIG-FGDEVIVPSNTFIATALAVSYTG-AK----------PIFVEPDIRT----YNID--------PSL 116 (373)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEETTSCTHHHHHHHHHS-CE----------EEEECEETTT----TEEC--------GGG
T ss_pred HHHHHHHHHHcCCC-CcCEEEECCCCcHHHHHHHHHcC-CE----------EEEEeccccc----cCcC--------HHH
Confidence 36777777765322 34568888888887554432211 11 1112211 10 1101 345
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+. +++++|++ ....|...+ +++|.++|++||+++|+||+|+. | . .+.....+..+|++++|
T Consensus 117 l~~~l~---~~~~~v~~---~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~~-g---~-~~~~~~~~~~~d~~~~S 181 (373)
T 3frk_A 117 IESAIT---EKTKAIIA---VHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQAH-G---S-LYKGMKVGSLGDAAGFS 181 (373)
T ss_dssp TGGGCC---TTEEEEEE---ECCTTCCCC----HHHHHHHHHHHTCEEEEECTTCT-T---C-EETTEETTSSSSEEEEE
T ss_pred HHHhcC---CCCeEEEE---ECCCcCccc----HHHHHHHHHHcCCEEEEECCccc-C---C-EECCEeccccccEEEEe
Confidence 555553 46777773 335666555 99999999999999999999972 1 1 12223455567999888
Q ss_pred ----ccccC-CcceeEEEec-HHHHHhchh---------------------------------------hhhHHHHHHHH
Q psy11784 160 ----KPMGN-GMPIGAVITS-RKIAESLNC---------------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 160 ----K~l~~-G~p~gav~~~-~~i~~~~~~---------------------------------------l~~~~~~~~~l 194 (284)
|++++ |. .|+++++ +++.+.+.. .++.+++.+++
T Consensus 182 ~~~~K~l~~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~ 260 (373)
T 3frk_A 182 FYPAKNLGSLGD-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKY 260 (373)
T ss_dssp CCTTSSSCCSSS-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CcCCCccCccce-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 64 6777775 445443221 12344455555
Q ss_pred HHHHHhccCc------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-------------------------
Q psy11784 195 VRPLGINLHI------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEY------------------------- 237 (284)
Q Consensus 195 ~~~L~~~~G~------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~------------------------- 237 (284)
.+.|+++ ++ ++.+.+. ......+.+.|.++||.+++..+.
T Consensus 261 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (373)
T 3frk_A 261 IAGINNP-NVIIPVEADYAKHVWYTFVIR--SEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIA 337 (373)
T ss_dssp HHHCCCT-TEECCCCCTTEECCCSSEEEE--ESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHH
T ss_pred HHHhccC-ceEeccCCCCCceeeEEEEEE--eCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHH
Confidence 5555442 10 0111111 124678999999999999854310
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 238 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...+|+.....+|++|||++++.|++...+
T Consensus 338 ~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 338 NEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp HHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred hCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 057999888899999999999999776543
No 191
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.53 E-value=9.8e-13 Score=120.99 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=119.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH-hCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE-IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~-~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++ +++++|++++.++..|.+.+ +++|.++|++ ||+++|+||+|+.+.. .. .+ + ++ .|+
T Consensus 137 ~~~l~~~i~---~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~~-~~-~~--~-~~--~di 202 (404)
T 1e5e_A 137 PGEVKKHMK---PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPMI-TN-PV--D-FG--VDV 202 (404)
T ss_dssp TTHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTTT-CC-GG--G-GT--CSE
T ss_pred HHHHHHhcC---CCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhhh-CC-cc--c-cC--CEE
Confidence 456666664 46899999999999998776 9999999999 9999999999996632 22 22 1 33 566
Q ss_pred E--EecccccC-Ccce-eEEEecHHHHH-hchh---------------------hh-------hHHHHHHHHHHHHHhc-
Q psy11784 156 I--TVGKPMGN-GMPI-GAVITSRKIAE-SLNC---------------------LD-------DNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 156 v--~~sK~l~~-G~p~-gav~~~~~i~~-~~~~---------------------l~-------~~~~~~~~l~~~L~~~- 201 (284)
+ +++|.+++ |.++ |++++++++++ .+.. ++ +..++.+.+.+.|++.
T Consensus 203 ~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~ 282 (404)
T 1e5e_A 203 VVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHP 282 (404)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5 68999986 6887 99999998877 4422 11 1233444444445432
Q ss_pred -------------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC---------------------
Q psy11784 202 -------------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG--------------------- 235 (284)
Q Consensus 202 -------------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~--------------------- 235 (284)
.|.++.+++. .. .....+.+.+.||++....
T Consensus 283 ~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~-~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~ 359 (404)
T 1e5e_A 283 AVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILK-SG--FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPK 359 (404)
T ss_dssp TEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEET-TH--HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCH
T ss_pred CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeC-CC--HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCH
Confidence 1777788773 21 2334455557788554311
Q ss_pred -----CC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 236 -----EY--GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 236 -----~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.+ .+.+|+++.+ ++++++++.|+++++.+..
T Consensus 360 ~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 360 EEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALLR 397 (404)
T ss_dssp HHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHHH
Confidence 11 4789998776 8899999999999987654
No 192
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.52 E-value=7.7e-13 Score=121.29 Aligned_cols=173 Identities=11% Similarity=0.063 Sum_probs=117.6
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh----CCEEEEecccccCccccCccccccccCCCC
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI----GGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~----g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
+++++.++ +++++|++|++++..|.+.+ +++|.++|++| |+++|+||+|+.+.+ .. .+. + .+
T Consensus 129 ~~l~~~i~---~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~~~~-~~-~~~---~--~~ 194 (393)
T 1n8p_A 129 NDLPQLIK---ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSPYI-SN-PLN---F--GA 194 (393)
T ss_dssp HHHHHHSC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHHHH-CC-GGG---G--TC
T ss_pred HHHHHhcc---cCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCcccccc-CC-HHH---c--CC
Confidence 44555553 46899999999999998886 99999999999 999999999986543 23 222 2 37
Q ss_pred cEE--EecccccC-Ccce-eEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 154 DII--TVGKPMGN-GMPI-GAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 154 Div--~~sK~l~~-G~p~-gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
|++ +++|.+++ |+++ |+++++ +++++.+.. +++..++.+.+.+.|++.
T Consensus 195 di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~ 274 (393)
T 1n8p_A 195 DIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAAD 274 (393)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 777 68899996 6888 888885 777766543 122333444555555431
Q ss_pred ----------------------------c-CceeEEEEecccHHHHHHHHHHHHCCcEEeec----------C-------
Q psy11784 202 ----------------------------L-HIFWCLILLSITYYLYRYTRRMKEAKIIVANE----------G------- 235 (284)
Q Consensus 202 ----------------------------~-G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~----------~------- 235 (284)
. |.++++++.+.......+...+...++.+..+ .
T Consensus 275 ~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~ 354 (393)
T 1n8p_A 275 KENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIP 354 (393)
T ss_dssp TTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSC
T ss_pred CCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccccC
Confidence 1 55777777433345666666654434332211 1
Q ss_pred --------CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 236 --------EYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 236 --------~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
...+.||++.....++++|+.+.+.|+++
T Consensus 355 ~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 355 KEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp TTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 11368999999999999999888888654
No 193
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.51 E-value=3.2e-13 Score=129.13 Aligned_cols=188 Identities=13% Similarity=0.049 Sum_probs=119.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHH--HHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYI--HEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~--~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.++|++.+ ..++.+|++...++..|. ..+.+.+++|.++| ++||+++|+||+|..|..... .......+....
T Consensus 235 ~~~l~~~~---~~~~k~v~l~~p~NPtG~-~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~-s~~~~~~~~~i~ 309 (546)
T 2zy4_A 235 DSELDKLK---DPAIKIFFCVNPSNPPSV-KMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQ-SLFAICPENTLL 309 (546)
T ss_dssp HHHHGGGG---STTEEEEEEESSCSSSCB-CCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCC-CHHHHCGGGEEE
T ss_pred HHHHHHhh---CCCCeEEEEECCCCCCCc-cCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCc-CHHHhCCCCEEE
Confidence 45665544 245777777665666775 56888899999999 889999999999998854222 111111112222
Q ss_pred EEEeccccc-CCcceeEEEecHH-HHHhch--------------------------------------------h-----
Q psy11784 155 IITVGKPMG-NGMPIGAVITSRK-IAESLN--------------------------------------------C----- 183 (284)
Q Consensus 155 iv~~sK~l~-~G~p~gav~~~~~-i~~~~~--------------------------------------------~----- 183 (284)
+.+|||.+| .|+++|+++++++ +++.+. .
T Consensus 310 ~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 389 (546)
T 2zy4_A 310 VYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQ 389 (546)
T ss_dssp EEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHH
T ss_pred EEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHH
Confidence 458999997 6899999999875 544330 0
Q ss_pred -----------------------hhhHHHHHHHHHHHHHh-c------cCceeEEEEec------cc----------HHH
Q psy11784 184 -----------------------LDDNRPSGKYLVRPLGI-N------LHIFWCLILLS------IT----------YYL 217 (284)
Q Consensus 184 -----------------------l~~~~~~~~~l~~~L~~-~------~G~~~~i~~~~------~~----------~~~ 217 (284)
.+.++++.+.+.+.|.. . .|+++++++.. .. ...
T Consensus 390 Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~ 469 (546)
T 2zy4_A 390 QVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTG 469 (546)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGTSSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHH
Confidence 00111222222222210 0 34455666521 00 012
Q ss_pred HHHHHHHHHCCcEEeecCCC---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 218 YRYTRRMKEAKIIVANEGEY---GNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~~~~~~~---~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
..+.+.+.++||.+.|+..+ .+++|++.. ..+++++++++++|.++++++.+
T Consensus 470 ~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 470 DMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp HHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 34566777899999997644 368999875 45899999999999999988764
No 194
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.51 E-value=1.2e-12 Score=118.86 Aligned_cols=227 Identities=15% Similarity=0.161 Sum_probs=142.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++..+. ....+|++...+||+....+.... .. +.++|.... .+.-| .++|
T Consensus 63 t~al~~~l~~l~~-~~gd~Vi~~~~~~~~~~~~~~~~g-~~----------~~~v~~~~~---~~~~d--------~~~l 119 (388)
T 1b9h_A 63 THALELALQVMGV-GPGTEVIVPAFTFISSSQAAQRLG-AV----------TVPVDVDAA---TYNLD--------PEAV 119 (388)
T ss_dssp HHHHHHHHHHTTC-CTTCEEEEESSSCTHHHHHHHHTT-CE----------EEEECBCTT---TCCBC--------HHHH
T ss_pred HHHHHHHHHHcCC-CCcCEEEECCCccHHHHHHHHHcC-CE----------EEEEecCCC---cCCCC--------HHHH
Confidence 4677888776532 233578888899988765433211 10 112222110 11112 5777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.+. +++++|+ |... .|...+ +++|.++|++||+++|+||+|+ |+...|. . ...+ +|++++|
T Consensus 120 ~~~i~---~~~~~v~--~~n~-tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~-~--~~~~---~~i~~~S 183 (388)
T 1b9h_A 120 AAAVT---PRTKVIM--PVHM-AGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGK-R--VGEL---DSIATFS 183 (388)
T ss_dssp HHHCC---TTEEEEC--CBCG-GGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTE-E--GGGS---SSCEEEE
T ss_pred HHhcC---cCceEEE--EeCC-ccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCe-e--cccc---cceEEEE
Confidence 77764 4577766 5543 465554 8999999999999999999998 4433332 1 1222 2555544
Q ss_pred ----ccccCCcceeEEEecHH-H--HHhc--------------------------hh----------------hhhHHHH
Q psy11784 160 ----KPMGNGMPIGAVITSRK-I--AESL--------------------------NC----------------LDDNRPS 190 (284)
Q Consensus 160 ----K~l~~G~p~gav~~~~~-i--~~~~--------------------------~~----------------l~~~~~~ 190 (284)
|++++| .+|+++++++ + ++.+ .. .++.+++
T Consensus 184 ~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~ 262 (388)
T 1b9h_A 184 FQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDER 262 (388)
T ss_dssp CCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ccCCCcccCC-CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888775 6788888765 5 3332 00 2345667
Q ss_pred HHHHHHHHHhc-----c----------CceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCC-----------------
Q psy11784 191 GKYLVRPLGIN-----L----------HIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEY----------------- 237 (284)
Q Consensus 191 ~~~l~~~L~~~-----~----------G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~----------------- 237 (284)
.+++.+.|+++ . +.++++.+... ......+.+.|.++||.+.++.+.
T Consensus 263 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 342 (388)
T 1b9h_A 263 WTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESV 342 (388)
T ss_dssp HHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCH
T ss_pred HHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccc
Confidence 77888888764 1 23445554211 125678999999999999764210
Q ss_pred --------------CCEEEEEcCCCC-CHHHHHHHHHHHHHHHHH
Q psy11784 238 --------------GNVLLFLPAMCL-TTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 238 --------------~~~lr~~p~l~~-t~~~id~~~~~l~~~l~~ 267 (284)
.+.|||.....+ |++|||++++.|.+++++
T Consensus 343 ~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 343 DAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 125888877788 999999999999988754
No 195
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.51 E-value=3.1e-13 Score=124.65 Aligned_cols=241 Identities=15% Similarity=0.152 Sum_probs=135.6
Q ss_pred CcHHHHHHHHHH-Hc-----cCCccEEEEcCCCcccc-hhhhcCCCCcc----cccCC-CCCceEEccCCCCcCCCCCCC
Q psy11784 1 SEANDLALQLAR-AY-----TGRQNIVVVDAAYHGTV-NLLLDISPRAF----MLSSE-KKPWVHVIPFPDTYRGEFSAD 68 (284)
Q Consensus 1 seA~e~AlklAr-~~-----~~r~~il~~~~~yHG~t-~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 68 (284)
+||++.+++... .+ ....+|++...+||+.. ..+........ ..... ....+..+|.... .+ ..+
T Consensus 88 t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~--~~d 164 (432)
T 3a9z_A 88 TESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NG--QVE 164 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TS--SCC
T ss_pred HHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cC--CcC
Confidence 478888998874 22 12367888899998852 21111111100 00000 0011223343210 01 111
Q ss_pred chHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC----------CEEEEecccccCcc
Q psy11784 69 DPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG----------GVVIADEIQCGMGR 138 (284)
Q Consensus 69 ~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g----------~llI~DEv~tG~gr 138 (284)
.++|++.+. +++++|++++.++..|.+.+ +++|.++|++|| +++|+||+|. +|+
T Consensus 165 --------~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~-~~~ 228 (432)
T 3a9z_A 165 --------VEDILAAVR---PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQA-LGK 228 (432)
T ss_dssp --------HHHHHHTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-TTT
T ss_pred --------HHHHHHhcc---CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhh-hCC
Confidence 566766654 46889999999999998887 789999999999 9999999994 554
Q ss_pred ccCccccccccCCCCcEEEe--cccccCCcceeEEEecHHH-HHhch----------h----------------------
Q psy11784 139 SGSHFWAFQTQGAVPDIITV--GKPMGNGMPIGAVITSRKI-AESLN----------C---------------------- 183 (284)
Q Consensus 139 ~G~~~~a~~~~g~~pDiv~~--sK~l~~G~p~gav~~~~~i-~~~~~----------~---------------------- 183 (284)
.. .... ...+|++++ +|.+ |.++|++++++++ ...+. .
T Consensus 229 ~~---~~~~--~~~~d~~~~s~~K~~--g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~ 301 (432)
T 3a9z_A 229 RR---VDVE--DLGVDFLTIVGHKFY--GPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS 301 (432)
T ss_dssp SC---CCHH--HHCCSEEEEEGGGTT--CCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH
T ss_pred cc---cChh--hcCCCEEEEehhHhc--CCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH
Confidence 32 1222 134787755 8976 3569999998765 22221 0
Q ss_pred ------hhhHHHHHHHHHHHHHhccC----------------ceeEEEEecccHHHHHHHHHHHHCCcEEeec-------
Q psy11784 184 ------LDDNRPSGKYLVRPLGINLH----------------IFWCLILLSITYYLYRYTRRMKEAKIIVANE------- 234 (284)
Q Consensus 184 ------l~~~~~~~~~l~~~L~~~~G----------------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~------- 234 (284)
.++++++.+++.+.|+++.| .+..+.+.........+.+.+ +|+++..+
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~ 379 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDH 379 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCC
Confidence 22556667777777766312 234455532111234454444 24444321
Q ss_pred -----------CC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 235 -----------GE----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 235 -----------~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+. ..+.+|++++..+|++|+++++++|+++++++.
T Consensus 380 ~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 380 EDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp TTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 10 137899999998999999999999999988764
No 196
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.50 E-value=3.2e-13 Score=122.99 Aligned_cols=226 Identities=11% Similarity=-0.001 Sum_probs=132.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhh--cCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL--DISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
++|++.|++.. ...+|+....+|||...... ...+. .+..+ . | .+
T Consensus 86 t~a~~~~~~~~----~gd~Vl~~~~~y~~~~~~~~~~~~~g~----------~~~~v--~---------d--------~~ 132 (374)
T 2aeu_A 86 SSAILATILAL----KPKKVIHYLPELPGHPSIERSCKIVNA----------KYFES--D---------K--------VG 132 (374)
T ss_dssp HHHHHHHHHHH----CCSEEEEECSSSSCCTHHHHHHHHTTC----------EEEEE--S---------C--------HH
T ss_pred HHHHHHHHHhC----CCCEEEEecCCCCccHHHHHHHHHcCc----------EEEEe--C---------C--------HH
Confidence 36777787754 34578888888888543211 11110 01111 0 1 45
Q ss_pred HHHHHHHhcCCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE-
Q psy11784 79 AARNIMEAHRDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII- 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv- 156 (284)
++++. .+++++ |++++.++.+|. +...+++|.++|++||+++|+||+|..+ ..|. ..........+|++
T Consensus 133 ~l~~~----~~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~-~~~~-~~~~~~~~~~~di~~ 203 (374)
T 2aeu_A 133 EILNK----IDKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGAR-VRLL-FNQPPALKLGADLVV 203 (374)
T ss_dssp HHHTT----CCTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHH-HHHH-TTCCCHHHHTCSEEE
T ss_pred HHHhc----CCCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcccc-cccc-cccCCccccCCcEEE
Confidence 66554 245888 999988877774 5667999999999999999999988633 1111 00000111246877
Q ss_pred -EecccccCCcceeEEEecHHHHHhchh--------------------h--------hhHHHHHHHH----HHHHHh---
Q psy11784 157 -TVGKPMGNGMPIGAVITSRKIAESLNC--------------------L--------DDNRPSGKYL----VRPLGI--- 200 (284)
Q Consensus 157 -~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------l--------~~~~~~~~~l----~~~L~~--- 200 (284)
+++|.++| +++|++++++++++.+.. + ++..++.+.+ ++.|++
T Consensus 204 ~S~sK~l~g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 282 (374)
T 2aeu_A 204 TSTDKLMEG-PRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELK 282 (374)
T ss_dssp EETTSSSSS-CSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHT
T ss_pred ecCcccccC-cceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 48999875 789999999998876543 1 1122222222 333332
Q ss_pred -c------------cCceeEEEEecccH---HHHHHHHHH-HHCCcEEeecCC---CCCEEEEEcCC-CCCHHHHHHHHH
Q psy11784 201 -N------------LHIFWCLILLSITY---YLYRYTRRM-KEAKIIVANEGE---YGNVLLFLPAM-CLTTENVLFIVS 259 (284)
Q Consensus 201 -~------------~G~~~~i~~~~~~~---~~~~~~~~l-~~~Gv~~~~~~~---~~~~lr~~p~l-~~t~~~id~~~~ 259 (284)
+ .|.++...-.+... ...+++..+ .++||++.++.. ..+++||.++. ..++.+++.+++
T Consensus 283 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~ 362 (374)
T 2aeu_A 283 AIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIK 362 (374)
T ss_dssp TTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHH
T ss_pred hhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHH
Confidence 1 12222211001100 112365554 468999988643 23589998763 334445888888
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
.|+++++++.
T Consensus 363 ~l~~~l~~~~ 372 (374)
T 2aeu_A 363 AIVESIKMAF 372 (374)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 8888888764
No 197
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.50 E-value=1.9e-13 Score=123.61 Aligned_cols=218 Identities=14% Similarity=0.141 Sum_probs=137.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++.++.- ...+|++...+|++....+.... .. +.+++.... .+.-| .+++
T Consensus 60 t~al~~al~~~~~~-~gd~Vi~~~~~~~~~~~~~~~~G-~~----------~~~~~~~~~---~~~~d--------~~~l 116 (367)
T 3nyt_A 60 TDALQIVQMALGVG-PGDEVITPGFTYVATAETVALLG-AK----------PVYVDIDPR---TYNLD--------PQLL 116 (367)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEESSSCTHHHHHHHHTT-CE----------EEEECBCTT---TCSBC--------GGGT
T ss_pred HHHHHHHHHHhCCC-CcCEEEECCCccHHHHHHHHHcC-CE----------EEEEecCCc---cCCcC--------HHHH
Confidence 46888888877532 34578888888887655443321 11 112222110 01111 3455
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.+. +++++|++++..| ...+ +++|.++|++||+++|+||+|+ |....|+ ..+...|++++|
T Consensus 117 ~~~i~---~~~~~v~~~~~~G---~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~------~~~~~~di~~~S 180 (367)
T 3nyt_A 117 EAAIT---PRTKAIIPVSLYG---QCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGK------RSCNLSTVACTS 180 (367)
T ss_dssp GGGCC---TTEEEECCBCGGG---CCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTE------ETTSSSSEEEEE
T ss_pred HHhcC---cCCcEEEeeCCcc---Chhh----HHHHHHHHHHcCCEEEEECccccCCeECCe------eccCCCCEEEEE
Confidence 55553 5688888665443 3333 9999999999999999999997 4432332 222334999887
Q ss_pred ----ccccC-CcceeEEEe-cHHHHHhchh---------------------------------------hhhHHHHHHHH
Q psy11784 160 ----KPMGN-GMPIGAVIT-SRKIAESLNC---------------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 160 ----K~l~~-G~p~gav~~-~~~i~~~~~~---------------------------------------l~~~~~~~~~l 194 (284)
|.+++ |. .|++++ ++++++.+.. .++.+++.+++
T Consensus 181 f~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 259 (367)
T 3nyt_A 181 FFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEY 259 (367)
T ss_dssp CCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988 76 677777 4666554321 22555667777
Q ss_pred HHHHHhccCc--------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC--------C--------------C
Q psy11784 195 VRPLGINLHI--------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE--------Y--------------G 238 (284)
Q Consensus 195 ~~~L~~~~G~--------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------~--------------~ 238 (284)
.+.|+++ |+ .+.+.+ .....+.+.|.++||.+++..+ . .
T Consensus 260 ~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (367)
T 3nyt_A 260 DLSLKQV-GIGTPFIEVNNISVYAQYTVRM----DNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAAT 334 (367)
T ss_dssp HHHHHHT-TCCCCCCCTTEECCCSSEEEEC----SSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHH
T ss_pred HHHhccC-CeeccCCCCCCceeeEEEEEEe----CCHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHh
Confidence 7777764 21 112221 1467889999999998875321 0 1
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
..||+...-..|++|++.+++.+.+
T Consensus 335 ~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 335 QVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp HEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred CeEEccCCCCCCHHHHHHHHHHHHH
Confidence 3678877778899999999998854
No 198
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.49 E-value=2e-12 Score=118.89 Aligned_cols=93 Identities=13% Similarity=0.083 Sum_probs=72.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC-CEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG-GVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++ +++.+|++|+..+..|.+.+ +++|.++|++|| +++|+||+|+++. .+. . .+..+|+
T Consensus 141 ~~~l~~~i~---~~t~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~~livD~~~~~~~-~~~-~-----~~~~~di 206 (403)
T 3cog_A 141 IKLLEAAIT---PETKLVWIETPTNPTQKVID----IEGCAHIVHKHGDIILVVDNTFMSPY-FQR-P-----LALGADI 206 (403)
T ss_dssp HHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTSSSCCEEEEECTTTCTT-TCC-T-----TTTTCSE
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCeeeC----HHHHHHHHHHcCCCEEEEECCCcccc-cCC-c-----cccCCeE
Confidence 567777664 46899999999999998886 999999999999 9999999998652 222 1 1245788
Q ss_pred E--EecccccC-C-cceeEEEec-HHHHHhchh
Q psy11784 156 I--TVGKPMGN-G-MPIGAVITS-RKIAESLNC 183 (284)
Q Consensus 156 v--~~sK~l~~-G-~p~gav~~~-~~i~~~~~~ 183 (284)
+ +++|.+++ | .++|+++++ +++++.+..
T Consensus 207 v~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~ 239 (403)
T 3cog_A 207 SMYSATKYMNGHSDVVMGLVSVNCESLHNRLRF 239 (403)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECCHHHHHHHHH
T ss_pred EEEcChhhccCCCCCeEEEEEECcHHHHHHHHH
Confidence 7 68899986 3 578999985 777666543
No 199
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.48 E-value=1e-13 Score=129.29 Aligned_cols=167 Identities=11% Similarity=0.013 Sum_probs=110.5
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCcEEEec--ccccCC
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPDIITVG--KPMGNG 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G 165 (284)
+++++|++.+ ++..|...+ +++|.++|++||+++|+||+|++ ++..+. .+..... .+|+++.| |.++++
T Consensus 145 ~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~--g~Di~~~S~~K~l~~~ 216 (446)
T 2x3l_A 145 DGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY--QADYVVQSFHKTLPAL 216 (446)
T ss_dssp --CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG--TCSEEEECHHHHSSSC
T ss_pred CCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc--CCCEEEECCccccccc
Confidence 3577888887 666787776 99999999999999999999986 222221 1222223 37888776 998877
Q ss_pred cceeEEEecHHHHH--hchh------------------------hh-----hHHHHHHHHHHHHHhc--------cCcee
Q psy11784 166 MPIGAVITSRKIAE--SLNC------------------------LD-----DNRPSGKYLVRPLGIN--------LHIFW 206 (284)
Q Consensus 166 ~p~gav~~~~~i~~--~~~~------------------------l~-----~~~~~~~~l~~~L~~~--------~G~~~ 206 (284)
.++|++++++++++ .+.. ++ ++.+....+.+.+++. .+..+
T Consensus 217 ~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~l 296 (446)
T 2x3l_A 217 TMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENKGFEMLQVDDPLKL 296 (446)
T ss_dssp TTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTCEEEECSSTTEE
T ss_pred cccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCEECcCCCCeEE
Confidence 77899999876543 2211 00 0222222333333321 12223
Q ss_pred EEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 207 CLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 207 ~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+.+ + .....++.+.|.++||.+...+ .+.+|+.++..+|++++ +++++|.++++.+
T Consensus 297 ~i~~-~-~~~~~~l~~~L~~~GI~v~~~g--~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 297 LIKY-E-GFTGHDIQNWFMNAHIYLELAD--DYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp EEEC-T-TSCHHHHHHHHHHTTEEESEEC--SSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred EEEe-C-CcCHHHHHHHHHHCCCEEEecC--CCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 3333 2 2346678899999999997322 46899999998999999 9999999988665
No 200
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.47 E-value=3e-12 Score=117.74 Aligned_cols=227 Identities=15% Similarity=0.209 Sum_probs=141.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
|+|++.|++..+.- ...+|++...+|++....+.... .. +..+|... ..+.-| .+++
T Consensus 67 t~al~~~~~~~~~~-~gd~Vl~~~~~~~~~~~~~~~~g-~~----------~~~~~~~~---~~~~~d--------~~~l 123 (418)
T 2c81_A 67 STALMLALEALGIG-EGDEVIVPSLTWIATATAVLNVN-AL----------PVFVDVEA---DTYCID--------PQLI 123 (418)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEEESSSCTHHHHHHHHTT-CE----------EEEECBCT---TTCSBC--------HHHH
T ss_pred HHHHHHHHHHcCCC-CcCEEEECCCccHhHHHHHHHcC-CE----------EEEEecCC---CCCCcC--------HHHH
Confidence 35677777765322 23568888888888765443211 11 11222211 011111 5666
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc-ccCccccccccCCCCcEE--E
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR-SGSHFWAFQTQGAVPDII--T 157 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-~G~~~~a~~~~g~~pDiv--~ 157 (284)
++.++ +++++|++... .|...+ +++|.++|++||+++|+||+|+.+.. .|. ..+..+|++ +
T Consensus 124 ~~~i~---~~~~~v~~~~~---~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~~~~~~s 187 (418)
T 2c81_A 124 KSAIT---DKTKAIIPVHL---FGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQ------RAGTIGDIGAFS 187 (418)
T ss_dssp GGGCC---TTEEEECCBCC---TTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTE------ETTSSSSEEEEE
T ss_pred HHhhC---CCCeEEEEeCC---cCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCE------ecccccceEEEe
Confidence 66554 46788887653 454443 99999999999999999999986542 222 122224555 4
Q ss_pred e--cccccCCcceeEEEec-HHHHHhchh---------------------------------------------------
Q psy11784 158 V--GKPMGNGMPIGAVITS-RKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 158 ~--sK~l~~G~p~gav~~~-~~i~~~~~~--------------------------------------------------- 183 (284)
| +|.+++| +.|+++++ +++++.+..
T Consensus 188 ~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~ 266 (418)
T 2c81_A 188 CQQGKVLTAG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELD 266 (418)
T ss_dssp CCTTSSSCSS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHH
T ss_pred ccCCcccCCC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHH
Confidence 5 8999987 88999984 665432210
Q ss_pred --hhhHHHHHHHHHHHHHhc---------cC----c--eeEEEEecc----cHHHHHHHHHHHHC-CcE---EeecC-C-
Q psy11784 184 --LDDNRPSGKYLVRPLGIN---------LH----I--FWCLILLSI----TYYLYRYTRRMKEA-KII---VANEG-E- 236 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~---------~G----~--~~~i~~~~~----~~~~~~~~~~l~~~-Gv~---~~~~~-~- 236 (284)
.++.+++.+++.+.|+++ .+ . ++.+.+ +. .....++.+.|.++ ||. +.++. +
T Consensus 267 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~ 345 (418)
T 2c81_A 267 DKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRF-DPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPV 345 (418)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEE-CGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCG
T ss_pred HHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEE-ccccccccCHHHHHHHHHHcCCCCccccccccccc
Confidence 123344556666677653 12 1 122344 22 23567899999999 999 76531 0
Q ss_pred -----------------------------C-------CCEEEEEcCCCC-CHHHHHHHHHHHHHHHHHH
Q psy11784 237 -----------------------------Y-------GNVLLFLPAMCL-TTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 237 -----------------------------~-------~~~lr~~p~l~~-t~~~id~~~~~l~~~l~~~ 268 (284)
. .+.||+.++..+ |++|++.+++.|+++++++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 346 HKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp GGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred ccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 0 148999999999 9999999999999987654
No 201
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.43 E-value=9.1e-12 Score=117.12 Aligned_cols=188 Identities=12% Similarity=-0.013 Sum_probs=122.1
Q ss_pred HHHHHHHHHhcC-CC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAHR-DN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|+... .+ ..+|++.-.....|.+.+ +++|.++|++||+++++|++|.|+...+. .+.....|+ .
T Consensus 225 ~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~-~~~~~~~gi~~ 299 (481)
T 4e1o_A 225 GEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCP-EFRGFLKGIEY 299 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSG-GGGGGGTTGGG
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhCh-hhHHHhcCccc
Confidence 678888886321 22 445555544556787766 99999999999999999999976422222 122122343 3
Q ss_pred CcEEEe--cccccCCcceeEEEecHH-HHH-hch-----------------------------h----------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK-IAE-SLN-----------------------------C---------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~-i~~-~~~-----------------------------~---------------- 183 (284)
.|.+++ .|+++..+..|+++.+++ ... .+. .
T Consensus 300 aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~ 379 (481)
T 4e1o_A 300 ADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQ 379 (481)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHH
Confidence 588776 598886566777777543 221 100 0
Q ss_pred --hhhHHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCc-EEeecCCC-CCEEEEEcC-CCC
Q psy11784 184 --LDDNRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKI-IVANEGEY-GNVLLFLPA-MCL 249 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv-~~~~~~~~-~~~lr~~p~-l~~ 249 (284)
+++..++.+++.+.|+++ ...++.+.+.+......++.+.|.++|. ++.+.... ..++|++.. ...
T Consensus 380 ~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t 459 (481)
T 4e1o_A 380 AHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFT 459 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCC
Confidence 346667788888888875 1123444443333456789999998884 44443222 357999855 345
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q psy11784 250 TTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~ 269 (284)
|++||++++++|+++++++.
T Consensus 460 t~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 460 TRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999988764
No 202
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.41 E-value=7.7e-12 Score=111.90 Aligned_cols=163 Identities=9% Similarity=0.031 Sum_probs=117.3
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh-CCEEEEecccccCccccCccccccccCCCCcEEEe--cccccC
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI-GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV--GKPMGN 164 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~--sK~l~~ 164 (284)
.+++.+|++++.++..|.+.+ +++|.++|++| |+++|+||+|+.+.. . . ... ..|++++ +|.+++
T Consensus 128 ~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~~~~~-~---~--~~~--~~d~~~~s~~K~~~~ 195 (362)
T 3ffr_A 128 PADAEIICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSSLPYP-K---F--DWT--KIDSVFFSVQKCFGL 195 (362)
T ss_dssp CTTCCEEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTTTTSS-C---C--CTT--SCSEEEEETTSTTCC
T ss_pred cCCccEEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccccCCc-c---c--Chh--HCcEEEEecccccCC
Confidence 356888999998998998887 99999999999 999999999873211 1 1 111 1677754 599985
Q ss_pred CcceeEEEecHHHHHhch---------------------------h--------------------------hhhHHHHH
Q psy11784 165 GMPIGAVITSRKIAESLN---------------------------C--------------------------LDDNRPSG 191 (284)
Q Consensus 165 G~p~gav~~~~~i~~~~~---------------------------~--------------------------l~~~~~~~ 191 (284)
+..+|++++++++++.+. . .++.+++.
T Consensus 196 ~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 275 (362)
T 3ffr_A 196 PAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKA 275 (362)
T ss_dssp CSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 444678888887754321 0 22445566
Q ss_pred HHHHHHHHhcc-------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHH
Q psy11784 192 KYLVRPLGINL-------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 192 ~~l~~~L~~~~-------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~ 256 (284)
+++.+.|+++. +.++.+.+ +. ...++.+.|.++||.+.++.. .++.+|+.+....|++++++
T Consensus 276 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~ 352 (362)
T 3ffr_A 276 ALINTYIESSKVFSFGVEDAKLRSMTTIVANT-TM--LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHK 352 (362)
T ss_dssp HHHHHHHHHCSSEEESSSCGGGBCSSEEEEEE-SS--CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHccCceeccCChhhcCCceEEEec-CC--CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHH
Confidence 67777776641 23344444 22 577899999999999987522 35799999998999999999
Q ss_pred HHHHHHHHH
Q psy11784 257 IVSTLNRIF 265 (284)
Q Consensus 257 ~~~~l~~~l 265 (284)
++++|++++
T Consensus 353 l~~~l~~~~ 361 (362)
T 3ffr_A 353 LVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998753
No 203
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.41 E-value=1.2e-11 Score=114.79 Aligned_cols=143 Identities=11% Similarity=0.009 Sum_probs=100.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.++ +++++|++|+.+++......+...+++|.++|++ ||+++|+||+|..+...+. .. ..|....
T Consensus 155 ~e~l~~~l~---~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~-~~---~~g~Di~ 227 (431)
T 3ht4_A 155 FEAVAAAIH---SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE-PC---HVGADLM 227 (431)
T ss_dssp HHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC-GG---GTTCSEE
T ss_pred HHHHHhhcC---CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC-cc---ccCCeEE
Confidence 677777765 5689999997443333335677889999999999 9999999999987644333 22 2243333
Q ss_pred EEEecccccCC--cceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 155 IITVGKPMGNG--MPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 155 iv~~sK~l~~G--~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+.+++|.++|| .+.|++++++++++.+.. +++..++++++.+.|+++
T Consensus 228 ~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~~~L~~~ 307 (431)
T 3ht4_A 228 AGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKL 307 (431)
T ss_dssp EEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 44689999975 567899999998876643 235556667777777764
Q ss_pred ------------cCceeEEEEecccHHHHHHHHHHHHC
Q psy11784 202 ------------LHIFWCLILLSITYYLYRYTRRMKEA 227 (284)
Q Consensus 202 ------------~G~~~~i~~~~~~~~~~~~~~~l~~~ 227 (284)
.++++++.+ ++.+...++++.|.+.
T Consensus 308 g~~v~p~~~~~~~~li~~i~l-~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 308 GMNTSPAWNAPRTDLIQSVQF-DDKDRMIAFCQAIQYA 344 (431)
T ss_dssp TCCEESCTTSCCSSSCCEEEC-CCHHHHHHHHHHHHHT
T ss_pred cCEecCCCCCCCccEEEEEEe-CCHHHHHHHHHHHHhc
Confidence 233667777 3556678888888876
No 204
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.37 E-value=1.1e-11 Score=114.27 Aligned_cols=176 Identities=14% Similarity=0.124 Sum_probs=116.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--cccccccc-CCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQTQ-GAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~~~-g~~ 152 (284)
.+.+++.+... ....++++-|- ++-.|. .++++.+++|.++|++||+++|.||+|.+|...+. .......+ ...
T Consensus 161 ~~~l~~~l~~~-~~~~~i~l~~~~~NPTG~-~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~ 238 (405)
T 3k7y_A 161 YDLFLNDLRNI-PNGSSVILQISCYNPCSV-NIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN 238 (405)
T ss_dssp HHHHHHHHHHS-CSSCEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT
T ss_pred HHHHHHHHHhC-CCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcC
Confidence 67788877642 23456777654 676776 56899999999999999999999999998853221 01111111 222
Q ss_pred CcE---EEeccccc-CCcceeEEEe---cHHHHHhchh------------------------h-----------------
Q psy11784 153 PDI---ITVGKPMG-NGMPIGAVIT---SRKIAESLNC------------------------L----------------- 184 (284)
Q Consensus 153 pDi---v~~sK~l~-~G~p~gav~~---~~~i~~~~~~------------------------l----------------- 184 (284)
+.+ -+|||.++ .|+++|++++ ++++++.+.. +
T Consensus 239 ~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~ 318 (405)
T 3k7y_A 239 IAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLS 318 (405)
T ss_dssp CCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 333 37899999 7999999864 4554332210 1
Q ss_pred hhHHHHHHHHHHHHH----hc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCC
Q psy11784 185 DDNRPSGKYLVRPLG----IN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMC 248 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~----~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~ 248 (284)
++++++.+++.+.|+ ++ .|+++++.+ +. ++++.|.++||++.|++ ||+.+ .
T Consensus 319 ~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l-~~-----~~~~~L~~~gV~v~p~~------Ris~a-~ 385 (405)
T 3k7y_A 319 QRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPL-LA-----KIAEHLKTHHIYIINNG------RINVS-G 385 (405)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGG-GG-----GGTTTTTTTTEECCTTS------EEEGG-G
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCC-CH-----HHHHHHHHCCEeecCCC------eEEEe-c
Confidence 125566777888887 42 344444433 21 34556678899999742 77533 3
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~ 267 (284)
.++++|++++++|.++++.
T Consensus 386 ~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 386 ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp CCTTHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 5889999999999998763
No 205
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.36 E-value=3e-11 Score=112.78 Aligned_cols=182 Identities=10% Similarity=0.007 Sum_probs=119.1
Q ss_pred HHHHHHHH-Hhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc-cCCCC
Q psy11784 77 AQAARNIM-EAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT-QGAVP 153 (284)
Q Consensus 77 ~~~l~~~i-~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~-~g~~p 153 (284)
.++|++.+ +.. ..++.+|++.......|.+.+ +++|.++|++||+++++||++.++. .|........ .+ .+
T Consensus 216 ~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~~g~~v~vD~A~~~~~-~g~~~~~~~~~~~-~~ 289 (456)
T 2z67_A 216 VEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQN-NYYLEKLKKAFKY-RV 289 (456)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTC-HHHHHHHHHHHTS-CC
T ss_pred HHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCcEEEECcchHHH-HHhhHHHHHhhCC-CC
Confidence 67888888 321 235666655544455677776 9999999999999999999987652 2210011111 22 68
Q ss_pred cEEEe--cccccCCcceeEEEe-cHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 154 DIITV--GKPMGNGMPIGAVIT-SRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 154 Div~~--sK~l~~G~p~gav~~-~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
|++++ .|.+++++.+|++++ ++++.+.+.. .++..++.+++.+.|+++
T Consensus 290 D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 369 (456)
T 2z67_A 290 DAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDL 369 (456)
T ss_dssp SEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88766 698777788999999 5666654422 235667778888888764
Q ss_pred c---Cc-------eeEEEEecccHHHHHHHHHHHHCCcE---Ee------ec----CCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 202 L---HI-------FWCLILLSITYYLYRYTRRMKEAKII---VA------NE----GEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 202 ~---G~-------~~~i~~~~~~~~~~~~~~~l~~~Gv~---~~------~~----~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
. |. ++.+.+... ....++.+.|.++|+. +. .+ ....+++|++.++.+|++|+|+++
T Consensus 370 ~~~~g~~v~~~~~~v~~~~~~~-~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l 448 (456)
T 2z67_A 370 SKKTGGKFLDVESPIASCISVN-SDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSV 448 (456)
T ss_dssp HHHSSCCBCCCCCSSEEEEECS-SCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHH
T ss_pred ccccCCEecCCCCeEEEEEecc-cHHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHH
Confidence 2 42 233444111 1145788889999862 22 00 112368999999899999999999
Q ss_pred HHHHHHH
Q psy11784 259 STLNRIF 265 (284)
Q Consensus 259 ~~l~~~l 265 (284)
++|++++
T Consensus 449 ~~L~~~~ 455 (456)
T 2z67_A 449 SKLEKIL 455 (456)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9998654
No 206
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.35 E-value=2.1e-11 Score=112.80 Aligned_cols=180 Identities=15% Similarity=0.101 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc--cccccc-cCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH--FWAFQT-QGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~--~~a~~~-~g~~p 153 (284)
.+.+.+.++...++...++.-+-++-.|. .++++.+++|.++|+++++++|+||+|.||...+.. .+.... .+..+
T Consensus 177 ~~~~~~~l~~~~~~~~vll~~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
T 4h51_A 177 FEGMKKDILAAPDGSVFILHQCAHNPTGV-DPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGI 255 (420)
T ss_dssp HHHHHHHHHHSCSSCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCc
Confidence 34555556555556666666665666675 669999999999999999999999999999532210 111111 11222
Q ss_pred cE---EEeccccc-CCcceeEEEecHHHHHh-------chh-------------------------------------hh
Q psy11784 154 DI---ITVGKPMG-NGMPIGAVITSRKIAES-------LNC-------------------------------------LD 185 (284)
Q Consensus 154 Di---v~~sK~l~-~G~p~gav~~~~~i~~~-------~~~-------------------------------------l~ 185 (284)
.+ -+|||.++ .|+++|++++..+..+. +.. .+
T Consensus 256 ~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~ 335 (420)
T 4h51_A 256 EVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAE 335 (420)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 23 37899998 48999999875332221 100 12
Q ss_pred hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 186 DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
+++++++.|.+.|+++ .|+|..+.+. .+.++.|.++||++.+++ ||+.+ .++++.
T Consensus 336 r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls------~e~v~~L~e~~Vy~~~~g------Ris~A-gl~~~n 402 (420)
T 4h51_A 336 RIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS------KAQCEYCQNHNIFITVSG------RANMA-GLTHET 402 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC------HHHHHHHHHTTEECCTTC------EEEGG-GCCHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC------HHHHHHHHhCCEEEcCCC------EEEec-cCCHHH
Confidence 4566677777777764 4555444342 234567889999988643 77543 469999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy11784 254 VLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 254 id~~~~~l~~~l~~~~~ 270 (284)
|+.++++|.++++++.+
T Consensus 403 i~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 403 ALMLAQTINDAVRNVNR 419 (420)
T ss_dssp HHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999988754
No 207
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.35 E-value=1.9e-11 Score=113.41 Aligned_cols=85 Identities=15% Similarity=0.214 Sum_probs=61.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++++|++|..++..|.+.+ +++|.++|++||++||+||+++. |. .+....+|....+.
T Consensus 157 ~~~l~~ai~---~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~~----~~-~~~~~~~g~div~~ 224 (430)
T 3ri6_A 157 SLAVEHACD---ETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMTP----PY-LLEAKRLGVDIEVL 224 (430)
T ss_dssp HHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTSC----TT-TCCGGGGTCSEEEE
T ss_pred HHHHHHhhC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc----cc-cCChHHcCCEEEEE
Confidence 577777764 56899999999999998877 99999999999999999999962 22 22222345434445
Q ss_pred EecccccC-CcceeEEEe
Q psy11784 157 TVGKPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 ~~sK~l~~-G~p~gav~~ 173 (284)
+++|.++| |..+|.++.
T Consensus 225 S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 225 SSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp ECCCEEETTEEECCEEEE
T ss_pred CCcccccCCCCceEEEEE
Confidence 67899987 444444444
No 208
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.33 E-value=8e-11 Score=110.53 Aligned_cols=189 Identities=10% Similarity=-0.050 Sum_probs=120.6
Q ss_pred HHHHHHHHHhcC-CC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAHR-DN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|+... .+ +.+|++.-.....|.+.+ +++|.++|++||+++++|++|.+.-..+. .+.....|+ .
T Consensus 218 ~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~-~~~~~~~gi~~ 292 (475)
T 3k40_A 218 GAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICP-EYRHLMKGIES 292 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSG-GGGGGGTTGGG
T ss_pred HHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCH-hhHHHhcCccc
Confidence 678888887321 12 444544444455677766 99999999999999999999975322221 111112233 3
Q ss_pred CcEEEe--cccccCCcceeEEEecHH-HH-Hhch-----------------------------h----------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK-IA-ESLN-----------------------------C---------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~-i~-~~~~-----------------------------~---------------- 183 (284)
.|.+++ .|.+++.+..|+++.+++ .. +.+. .
T Consensus 293 ~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~ 372 (475)
T 3k40_A 293 ADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQ 372 (475)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHH
Confidence 588776 498876566677776532 11 1000 0
Q ss_pred --hhhHHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEE-eecCC-CCCEEEEEcC-CCC
Q psy11784 184 --LDDNRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIV-ANEGE-YGNVLLFLPA-MCL 249 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~-~~~~~-~~~~lr~~p~-l~~ 249 (284)
+++..++.+++.+.|+++ ...++.+.+.+......++.+.|.++|.+. .+... +..++|++.. ...
T Consensus 373 ~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t 452 (475)
T 3k40_A 373 AHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFT 452 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCC
Confidence 346667788888888875 122344444333445678999999887654 33322 2368999864 345
Q ss_pred CHHHHHHHHHHHHHHHHHHhh
Q psy11784 250 TTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~~ 270 (284)
|++||++++++|+++++++.+
T Consensus 453 t~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 453 QSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999987753
No 209
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.33 E-value=5.4e-11 Score=111.92 Aligned_cols=178 Identities=12% Similarity=0.031 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.++|++.+... ++.+|++ ...+.+ .+.+ +++|+++|++||++||+||+|. |+-..|....... ..|+
T Consensus 182 ~d~le~~i~~~--~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~----~~di 249 (483)
T 1rv3_A 182 YDRLEENARLF--HPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE----HCHV 249 (483)
T ss_dssp HHHHHHHHHHH--CCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG----TCSE
T ss_pred HHHHHHHHhhc--CCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC----CCcE
Confidence 67888888632 3567777 444433 4443 8999999999999999999986 4322222111111 3577
Q ss_pred EEe--cccccCCcceeEEEecHH---------------HHHhchh---------------------------------hh
Q psy11784 156 ITV--GKPMGNGMPIGAVITSRK---------------IAESLNC---------------------------------LD 185 (284)
Q Consensus 156 v~~--sK~l~~G~p~gav~~~~~---------------i~~~~~~---------------------------------l~ 185 (284)
+++ +|+++ |.+.|+++++++ +.+.+.. .+
T Consensus 250 v~~s~~K~l~-GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~ 328 (483)
T 1rv3_A 250 VTTTTHKTLR-GCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQR 328 (483)
T ss_dssp EEEESSGGGC-CCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred EEecCcccCC-CCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 755 59995 456688888763 2221110 22
Q ss_pred hHHHHHHHHHHHHHhc------cC---ceeEEEEecccHHHHHHHHHHHHCCcEEe----ecC---CCCCEEEEEcCCCC
Q psy11784 186 DNRPSGKYLVRPLGIN------LH---IFWCLILLSITYYLYRYTRRMKEAKIIVA----NEG---EYGNVLLFLPAMCL 249 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~------~G---~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~----~~~---~~~~~lr~~p~l~~ 249 (284)
++.++.+++.+.|++. .| .+..+.+.+.......+.+.|.+.||.+. |+. ...+.+||.++...
T Consensus 329 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~ 408 (483)
T 1rv3_A 329 QVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALT 408 (483)
T ss_dssp HHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHH
T ss_pred HHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcc
Confidence 5666777888888764 11 23344442222245667788889999998 643 13468999988766
Q ss_pred C----HHHHHHHHHHHHHHHHH
Q psy11784 250 T----TENVLFIVSTLNRIFTS 267 (284)
Q Consensus 250 t----~~~id~~~~~l~~~l~~ 267 (284)
| ++|+++++++|.++++.
T Consensus 409 t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 409 SRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHh
Confidence 6 99999999999999876
No 210
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.31 E-value=4.4e-10 Score=106.41 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=121.2
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|+.. +..+.+|++.......|.+.+ +++|.++|++||+++++|++|.|.--... -+.....|+ .
T Consensus 232 ~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~~~~~~~g~~~ 306 (511)
T 3vp6_A 232 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNGIER 306 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTTGGG
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhCh-hhhhhccCCcc
Confidence 67888888632 222778888888888888876 99999999999999999999986422111 111112233 4
Q ss_pred CcEEEe--cccccCCcceeEEEecHH-HHHhch--------------------------------h--------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK-IAESLN--------------------------------C-------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~-i~~~~~--------------------------------~-------------- 183 (284)
.|++++ .|++++.+..|+++.+++ ..+... .
T Consensus 307 aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~g 386 (511)
T 3vp6_A 307 ANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVG 386 (511)
T ss_dssp CSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHH
Confidence 587765 598886666788877543 332210 0
Q ss_pred ----hhhHHHHHHHHHHHHHhccC-----------ceeEEEEeccc---------------HHHHHHHHHHHHCCcEEee
Q psy11784 184 ----LDDNRPSGKYLVRPLGINLH-----------IFWCLILLSIT---------------YYLYRYTRRMKEAKIIVAN 233 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~~G-----------~~~~i~~~~~~---------------~~~~~~~~~l~~~Gv~~~~ 233 (284)
+++..++.+++.+.|++..| .++.+.+.|.. ....++.+.|+++|+++..
T Consensus 387 l~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~ 466 (511)
T 3vp6_A 387 FENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG 466 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 33666777888888876411 12233322211 1134688899999965543
Q ss_pred cCC---CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 234 EGE---YGNVLLFLP-AMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 234 ~~~---~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
..+ ..+++|+.. +...|++||+.+++.|+++-+.+
T Consensus 467 ~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 467 YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 111 124699988 67789999999999998876654
No 211
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.31 E-value=1.4e-10 Score=105.38 Aligned_cols=223 Identities=14% Similarity=0.138 Sum_probs=137.2
Q ss_pred CcHHHHHHHHHHH-----ccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARA-----YTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~-----~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|+|++.|++.++. .....+|++...+||+....+.... .. +.++|.... .+.-|
T Consensus 59 t~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g-~~----------~~~~~~~~~---~~~~d------- 117 (390)
T 3b8x_A 59 STANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYG-LR----------VKFVDIDIN---TLNID------- 117 (390)
T ss_dssp HHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTT-CE----------EEEECBCTT---TCSBC-------
T ss_pred HHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcC-CE----------EEEEecCcc---ccCcC-------
Confidence 4678888887742 3334678999999998766544221 11 112222110 11112
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCc
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pD 154 (284)
.++|++.+. +++++|++.+.. |.. ..+++|.++|++||+++|+||+|+ |... ....+|..+|
T Consensus 118 -~~~l~~~i~---~~~~~v~~~~~~---g~~----~~~~~i~~l~~~~~~~li~D~a~~~g~~~------~~~~~g~~~~ 180 (390)
T 3b8x_A 118 -IESLKEAVT---DSTKAILTVNLL---GNP----NNFDEINKIIGGRDIILLEDNCESMGATF------NNKCAGTFGL 180 (390)
T ss_dssp -HHHHHHHCC---TTEEEEEEECGG---GCC----CCHHHHHHHHTTSCCEEEEECTTCTTCEE------TTEETTSSSS
T ss_pred -HHHHHHHhC---cCCeEEEEECCc---cCh----hhHHHHHHHHHHcCCEEEEECcCcccCEE------CCcccccccc
Confidence 577777764 357777774333 333 349999999999999999999998 3321 2235677889
Q ss_pred EEEecccccCCc---ceeEEEecH-HHHHhc------------------------------------------hh-----
Q psy11784 155 IITVGKPMGNGM---PIGAVITSR-KIAESL------------------------------------------NC----- 183 (284)
Q Consensus 155 iv~~sK~l~~G~---p~gav~~~~-~i~~~~------------------------------------------~~----- 183 (284)
+.+++|..+.++ ..|++++++ ++.+.+ ..
T Consensus 181 ~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 260 (390)
T 3b8x_A 181 MGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAI 260 (390)
T ss_dssp EEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHH
T ss_pred eEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHH
Confidence 999887555322 247777765 543210 00
Q ss_pred -----------hhhHHHHHHHHHHHHHhccC----------ce--eEEEEecc-cHHHHHHHHHHHHCCcEEeec--CC-
Q psy11784 184 -----------LDDNRPSGKYLVRPLGINLH----------IF--WCLILLSI-TYYLYRYTRRMKEAKIIVANE--GE- 236 (284)
Q Consensus 184 -----------l~~~~~~~~~l~~~L~~~~G----------~~--~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~--~~- 236 (284)
.++.+++.+++.+.|+++.| .+ +.+.+.+. ......+.+.|.++||.+.+. ++
T Consensus 261 ~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~ 340 (390)
T 3b8x_A 261 GIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNF 340 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCch
Confidence 22455666777777766411 12 22333210 224678999999999998752 10
Q ss_pred --C----C------------------CEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 237 --Y----G------------------NVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 237 --~----~------------------~~lr~~p~l~~t~~~id~~~~~l 261 (284)
. . +.||+.....+|++|++++++.|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 341 LKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp GGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred hhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 1 0 25899888899999999999876
No 212
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.29 E-value=3.3e-10 Score=105.39 Aligned_cols=185 Identities=13% Similarity=0.067 Sum_probs=121.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh------CCEEEEecccccCcc---ccCcccccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI------GGVVIADEIQCGMGR---SGSHFWAFQ 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr---~G~~~~a~~ 147 (284)
.++|++.++ +++.+|++.-.....|.+.+ +++|.++|++| |+++++|++|.++.. .+...+...
T Consensus 177 ~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 249 (452)
T 2dgk_A 177 PKRMIEACD---ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFR 249 (452)
T ss_dssp HHHHHHHCC---TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT
T ss_pred HHHHHHHHh---hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcC
Confidence 677887775 35667776655556788776 99999999996 999999999987522 111001111
Q ss_pred ccCCCCcEEEec--ccccCCcceeEEEecHH-HH-Hhch----------------------h------------------
Q psy11784 148 TQGAVPDIITVG--KPMGNGMPIGAVITSRK-IA-ESLN----------------------C------------------ 183 (284)
Q Consensus 148 ~~g~~pDiv~~s--K~l~~G~p~gav~~~~~-i~-~~~~----------------------~------------------ 183 (284)
. -..|+++++ |.+.+|+.+|+++++++ .. +.+. .
T Consensus 250 ~--~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~ 327 (452)
T 2dgk_A 250 L--PRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTK 327 (452)
T ss_dssp S--TTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHH
Confidence 1 135766654 87767788999998643 32 2110 0
Q ss_pred -hhhHHHHHHHHHHHHHhccCc-------------eeEEEEeccc---HHHHHHHHHHHHCCcEEeec----CC-CCCEE
Q psy11784 184 -LDDNRPSGKYLVRPLGINLHI-------------FWCLILLSIT---YYLYRYTRRMKEAKIIVANE----GE-YGNVL 241 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~~G~-------------~~~i~~~~~~---~~~~~~~~~l~~~Gv~~~~~----~~-~~~~l 241 (284)
.++..++.+++.+.|+++.|+ ++.+.+.+.. ....++.+.|.++|+.+... .. ..+.+
T Consensus 328 ~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~l 407 (452)
T 2dgk_A 328 VQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVM 407 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEE
Confidence 235556677788888764111 2222221110 12478999999999975432 11 23589
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 242 LFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 242 r~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
|++.....|++|+|.+++.|+++++.+.+
T Consensus 408 Ris~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 408 RIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99988888999999999999999988754
No 213
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.27 E-value=6.5e-10 Score=104.32 Aligned_cols=190 Identities=12% Similarity=0.005 Sum_probs=119.4
Q ss_pred HHHHHHHHHhcC-CC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAHR-DN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|+... .+ ..+|++--.....|.+.+ +++|.++|++||+++++|++|.++-.... .+.....++ .
T Consensus 219 ~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~-~~~~~~~g~~~ 293 (486)
T 1js3_A 219 ASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICP-EFRHLLNGVEF 293 (486)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGST-TTGGGGTTGGG
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCH-HHHHHhcCccc
Confidence 678888886321 12 334544433456677766 99999999999999999999986422111 011111222 3
Q ss_pred CcEEEe--cccccCCcceeEEEecHH-H-HHhch-------------------------------h--------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK-I-AESLN-------------------------------C-------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~-i-~~~~~-------------------------------~-------------- 183 (284)
.|.+++ .|.++..+.+|+++++++ . .+.+. .
T Consensus 294 adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g 373 (486)
T 1js3_A 294 ADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKG 373 (486)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHH
T ss_pred cCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHH
Confidence 577765 598876677898888644 2 22110 0
Q ss_pred ----hhhHHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEc-CC
Q psy11784 184 ----LDDNRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLP-AM 247 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p-~l 247 (284)
+++..++.+++.+.|++. .+.++.+.+.+......++.+.|.++|+++..... ..+.+|++. ..
T Consensus 374 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~ 453 (486)
T 1js3_A 374 LQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSR 453 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCC
Confidence 234556677777888764 12233444422223457888999988865432211 236899985 44
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
..|+++|++++++|+++++++.++
T Consensus 454 ~~t~~di~~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 454 KVESGHVRLAWEHIRGLAAELLAA 477 (486)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 468999999999999999887644
No 214
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.27 E-value=8.2e-11 Score=108.92 Aligned_cols=227 Identities=19% Similarity=0.185 Sum_probs=134.4
Q ss_pred CcHHHHHHHHHHH-------ccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARA-------YTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~-------~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
|+|++.|++..+. .....+|++...+||+....+... +.. +.++|... ..+.-|
T Consensus 87 t~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~----------~~~v~~~~---~~~~~d----- 147 (437)
T 3bb8_A 87 SSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQN-GLI----------PVFVDVDI---PTYNVN----- 147 (437)
T ss_dssp HHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHT-TCE----------EEECCEET---TTTEEC-----
T ss_pred HHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHc-CCE----------EEEEeccC---ccCCcC-----
Confidence 3677788877631 222357888888888866544321 111 11222110 001111
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~ 152 (284)
.+++++.+. +++++|++-... |.. ..+++|.++|++||+++|+||+|+ |....+ ...+..
T Consensus 148 ---~~~l~~~i~---~~~~~v~~~~~~---g~~----~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~------~~~~~~ 208 (437)
T 3bb8_A 148 ---ASLIEAAVS---DKTKAIMIAHTL---GNL----FDLAEVRRVADKYNLWLIEDCCDALGSTYDG------KMAGTF 208 (437)
T ss_dssp ---GGGHHHHCC---TTEEEEEEECGG---GCC----CCHHHHHHHHHHHTCEEEEECTTCTTCEETT------EETTSS
T ss_pred ---HHHHHHhcC---CCCeEEEEeCCC---CCh----hcHHHHHHHHHHcCCEEEEECccccCceECC------eecccc
Confidence 456666664 457777763222 332 349999999999999999999998 432222 234445
Q ss_pred CcEEEec----ccccCCcceeEEEecHHHHHhc-----------------------------------------------
Q psy11784 153 PDIITVG----KPMGNGMPIGAVITSRKIAESL----------------------------------------------- 181 (284)
Q Consensus 153 pDiv~~s----K~l~~G~p~gav~~~~~i~~~~----------------------------------------------- 181 (284)
+|++++| |++++| ..|+++++++.+..+
T Consensus 209 ~d~~~~s~~~~k~l~~g-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 287 (437)
T 3bb8_A 209 GDIGTVSFYPAKHITMG-EGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGY 287 (437)
T ss_dssp SSEEEEECSTTSSSCCS-SCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCC
T ss_pred cCEEEEECcCCcCCCCC-CeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCc
Confidence 7886653 777654 568888874432210
Q ss_pred ----hh----------------hhhHHHHHHHHHHHHHhccCce---------------eEEEEecc-cHHHHHHHHHHH
Q psy11784 182 ----NC----------------LDDNRPSGKYLVRPLGINLHIF---------------WCLILLSI-TYYLYRYTRRMK 225 (284)
Q Consensus 182 ----~~----------------l~~~~~~~~~l~~~L~~~~G~~---------------~~i~~~~~-~~~~~~~~~~l~ 225 (284)
.. +++.+++.+++.+.|+++.|.. +.+.+... ......+.+.|.
T Consensus 288 ~~~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 367 (437)
T 3bb8_A 288 NLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLD 367 (437)
T ss_dssp BCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHH
Confidence 01 1233455666777776542321 11222111 124678999999
Q ss_pred HCCcEEeecCC--------C------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 226 EAKIIVANEGE--------Y------------------GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 226 ~~Gv~~~~~~~--------~------------------~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++||.++++.+ . .+.+|+.....+|++|++.+++.|.++++
T Consensus 368 ~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 368 EAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 99999875422 0 01489988888999999999999987653
No 215
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.26 E-value=6.8e-10 Score=104.91 Aligned_cols=186 Identities=16% Similarity=0.075 Sum_probs=123.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh------CCEEEEecccccCcc---ccCcccccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI------GGVVIADEIQCGMGR---SGSHFWAFQ 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr---~G~~~~a~~ 147 (284)
.++|++.++ +++.+|++.-.....|.+.+ +++|.++|++| |+++++|++|.|+.. .+...+.+.
T Consensus 192 ~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~ 264 (502)
T 3hbx_A 192 PQQAVDMVD---ENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR 264 (502)
T ss_dssp HHHHHHHCC---TTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT
T ss_pred HHHHHHHHh---hCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC
Confidence 677777765 45677777666666688777 99999999999 999999999986531 111001111
Q ss_pred ccCCCCcEEEe--cccccCCcceeEEEecH-HHH-Hhch----------------------h------------------
Q psy11784 148 TQGAVPDIITV--GKPMGNGMPIGAVITSR-KIA-ESLN----------------------C------------------ 183 (284)
Q Consensus 148 ~~g~~pDiv~~--sK~l~~G~p~gav~~~~-~i~-~~~~----------------------~------------------ 183 (284)
-...|++++ .|.+.++..+|+++.++ +.. +.+. .
T Consensus 265 --~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~ 342 (502)
T 3hbx_A 265 --LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRN 342 (502)
T ss_dssp --STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 113466543 47776666778777653 322 1100 0
Q ss_pred -hhhHHHHHHHHHHHHHhcc----------CceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcC
Q psy11784 184 -LDDNRPSGKYLVRPLGINL----------HIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPA 246 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~~----------G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~ 246 (284)
.++..++.++|.+.|+++- .-++.+.+.+. ......+.+.|.++|+++..... ....+|+...
T Consensus 343 ~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~ 422 (502)
T 3hbx_A 343 VMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR 422 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence 3356667778888888751 11333444221 12345899999999998753221 2358999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
..+|+++++.+++.|+++++.+.+.
T Consensus 423 ~~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 423 EDFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999988653
No 216
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.25 E-value=5.4e-11 Score=109.90 Aligned_cols=173 Identities=10% Similarity=0.034 Sum_probs=114.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.++ +++.+|++|...+..|.+.+ +++|.++|++ ||+++|+||+|... ..+. .. ....|
T Consensus 157 ~~~le~ai~---~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a~~-~~~~-p~-----~~g~D 222 (415)
T 2fq6_A 157 GADIVKHLQ---PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAAG-VLFK-AL-----DFGID 222 (415)
T ss_dssp GGGGGGGCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTTT-TSSC-GG-----GGTCS
T ss_pred HHHHHHhhc---cCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCccc-ccCC-cc-----ccCCe
Confidence 455666554 46899999999999998887 9999999999 99999999999632 1121 11 23468
Q ss_pred EE--EecccccC-C-cceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 155 II--TVGKPMGN-G-MPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 155 iv--~~sK~l~~-G-~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
++ +++|.+++ | ...|++++++++++.+.. +++..++.+.+.+.|++.
T Consensus 223 iv~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~ 302 (415)
T 2fq6_A 223 VSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQ 302 (415)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 77 56799986 3 356899888877665442 123344455566666542
Q ss_pred ------------------------cCceeEEEEecc--cHHHHHHHHHHHHCCcEEe------------e----------
Q psy11784 202 ------------------------LHIFWCLILLSI--TYYLYRYTRRMKEAKIIVA------------N---------- 233 (284)
Q Consensus 202 ------------------------~G~~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~------------~---------- 233 (284)
.|.++++.+... ...+..+...+.-.++.+. |
T Consensus 303 v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~ 382 (415)
T 2fq6_A 303 VARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQG 382 (415)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTC
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchh
Confidence 145677777421 2455666665542232221 1
Q ss_pred -cCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 234 -EGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 234 -~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.+...+.||++..+..++++|+.+.+.|++
T Consensus 383 ~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 383 EIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 111247899999998889988888887764
No 217
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.19 E-value=4.4e-10 Score=100.62 Aligned_cols=160 Identities=13% Similarity=0.048 Sum_probs=108.8
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE--ecccccCCc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT--VGKPMGNGM 166 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~--~sK~l~~G~ 166 (284)
+++.+|++...++..|.+.+ +++++||+++|+||+|+.+... .....+ |+++ ++|.++. .
T Consensus 140 ~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~----~~~~~~----di~~~s~sK~~~~-~ 201 (360)
T 1w23_A 140 ENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP----LKVNQF----GMIYAGAQKNLGP-S 201 (360)
T ss_dssp TTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC----CCGGGC----SEEEEETTTTTSC-T
T ss_pred CCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC----cCcccC----CEEEEEcccccCC-C
Confidence 46888999988888888653 2334899999999999854321 111222 6765 4599973 2
Q ss_pred ceeEEEecHHHHHhchh--------------------------------h-------------hhHHHHHHHHHHHHHhc
Q psy11784 167 PIGAVITSRKIAESLNC--------------------------------L-------------DDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~--------------------------------l-------------~~~~~~~~~l~~~L~~~ 201 (284)
.+|++++++++++.+.. + ++.+++.+++.+.|+++
T Consensus 202 G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 202 GVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES 281 (360)
T ss_dssp TCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 48999999888653310 1 12334455666666553
Q ss_pred cCc-------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 LHI-------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ~G~-------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+ ++++.+ +......++.+.|.++||.+.++....+.+|+.++...|++++++++++|++++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 282 NGFYVGHAEKGSRSLMNVTFNL-RNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp TTSSEESSCGGGBCSSEEEEEC-SSHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCcccccCCchhccCcEEEEEc-CCCccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 111 333333 33334677888999999999876545678999999888999999999999988753
No 218
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.17 E-value=3.7e-10 Score=103.02 Aligned_cols=163 Identities=9% Similarity=0.009 Sum_probs=110.2
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGM 166 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~ 166 (284)
+++.+|++....+..|.+.+ +++|.++ ||+++|+||+|+.+... .... .+|+++++ |.++.+-
T Consensus 164 ~~~~~v~~~~~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~~----~~~~----~~di~~~s~sK~~~~~g 228 (398)
T 2fyf_A 164 PSVDVIAWAHNETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGLP----VDIA----ETDAYYFAPQKNFASDG 228 (398)
T ss_dssp TTCSEEEEESEETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTSC----CCGG----GCSEEEECTTSTTCSCS
T ss_pred CCCCEEEEeCcCCCcceecc----hHHhhhh---cCCeEEEEeccccCCcc----cCcc----cCcEEEEecCcccCCCC
Confidence 45778888888888888776 3344444 99999999999844321 1111 26887655 9998653
Q ss_pred ceeEEEecHHHHHhch-------------------------h----------------h-------------hhHHHHHH
Q psy11784 167 PIGAVITSRKIAESLN-------------------------C----------------L-------------DDNRPSGK 192 (284)
Q Consensus 167 p~gav~~~~~i~~~~~-------------------------~----------------l-------------~~~~~~~~ 192 (284)
.+|++++++++++.+. . + ++.+++.+
T Consensus 229 g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 229 GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4889999988865430 0 1 12344556
Q ss_pred HHHHHHHhc-----c--------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHH
Q psy11784 193 YLVRPLGIN-----L--------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 193 ~l~~~L~~~-----~--------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~ 257 (284)
++.+.|+++ . +.++++.+ +......++.+.|.++||.+.++.. .++.+|+++....|++|++++
T Consensus 309 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~ 387 (398)
T 2fyf_A 309 RLYSWAQERPYTTPFVTDPGLRSQVVGTIDF-VDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSAL 387 (398)
T ss_dssp HHHHHHHHSTTEEESCCSGGGBCSSEEEEEE-CTTSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHH
T ss_pred HHHHHHHHcCCceeccCChhhcCCcEEEEEC-CCCCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHH
Confidence 666666653 1 11444544 2223467899999999999986421 247899999888899999999
Q ss_pred HHHHHHHHHH
Q psy11784 258 VSTLNRIFTS 267 (284)
Q Consensus 258 ~~~l~~~l~~ 267 (284)
+++|++++++
T Consensus 388 ~~~l~~~l~~ 397 (398)
T 2fyf_A 388 TECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 219
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.14 E-value=2.3e-09 Score=100.89 Aligned_cols=178 Identities=12% Similarity=0.057 Sum_probs=112.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+...+ ...|++. |..+ ...+ +++|+++|++||++|++|++|. |+-..|.....+. ..|
T Consensus 192 ~d~le~~l~~~~--~klIi~~~s~~~---~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~----~aD 258 (490)
T 2a7v_A 192 YNQLALTARLFR--PRLIIAGTSAYA---RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HAD 258 (490)
T ss_dssp HHHHHHHHHHHC--CSEEEECCSSCC---SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG----TCS
T ss_pred HHHHHHHHhhcC--CcEEEEcCCCCC---Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC----CCC
Confidence 678888886433 3455554 4433 2223 8999999999999999999985 4322232111111 257
Q ss_pred EE--EecccccCCcceeEEEecHH---------------HHHhchh---------------------------------h
Q psy11784 155 II--TVGKPMGNGMPIGAVITSRK---------------IAESLNC---------------------------------L 184 (284)
Q Consensus 155 iv--~~sK~l~~G~p~gav~~~~~---------------i~~~~~~---------------------------------l 184 (284)
++ +++|+++| .+.|+++++++ +.+.+.. .
T Consensus 259 iv~~S~hK~l~G-p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~ 337 (490)
T 2a7v_A 259 IVTTTTHKTLRG-ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS 337 (490)
T ss_dssp EEEEESSGGGCS-CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EEEECCcccCcc-ccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHH
Confidence 76 56799964 35578877653 2222211 2
Q ss_pred hhHHHHHHHHHHHHHhc-----c-C---ceeEEEEecccHHHHHHHHHHHHCCcEEeecC-------CCCCEEEEEcCC-
Q psy11784 185 DDNRPSGKYLVRPLGIN-----L-H---IFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------EYGNVLLFLPAM- 247 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~-----~-G---~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~lr~~p~l- 247 (284)
+++.++.++|.+.|++. . | .++.+++.+.......+.+.|.+.||.+.... ..+..||+..|.
T Consensus 338 ~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~ 417 (490)
T 2a7v_A 338 LQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPAL 417 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHH
T ss_pred HHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEeccccc
Confidence 25556678888888774 1 1 24445543222346678888889999997421 134689995543
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHH
Q psy11784 248 ---CLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 248 ---~~t~~~id~~~~~l~~~l~~~ 268 (284)
.++++|++++++.|.++++..
T Consensus 418 t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 418 TSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHhh
Confidence 479999999999999998643
No 220
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.06 E-value=8.2e-09 Score=95.05 Aligned_cols=93 Identities=12% Similarity=0.056 Sum_probs=68.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcc----eecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccC
Q psy11784 77 AQAARNIMEAHRDNIATLICEP----VFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Ep----v~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.+++++.++ +++.+|++|+ ..+..|.+.+ +++|.++|++ ||+++|+||+|..+ ..+. +...
T Consensus 149 ~e~l~~ai~---~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~-~~~~-----~p~~ 215 (409)
T 3jzl_A 149 FPRIAKKMT---PKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEF-VEYQ-----EPPE 215 (409)
T ss_dssp HHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTT-TSSC-----CSGG
T ss_pred HHHHHHhcc---CCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccc-cccC-----Cccc
Confidence 567777664 4689999998 7777776655 9999999999 99999999998633 1111 1111
Q ss_pred CCCcEE--EecccccCC-cc-eeEEEecHHHHHhch
Q psy11784 151 AVPDII--TVGKPMGNG-MP-IGAVITSRKIAESLN 182 (284)
Q Consensus 151 ~~pDiv--~~sK~l~~G-~p-~gav~~~~~i~~~~~ 182 (284)
...|++ +++|.++++ -+ .|++++++++++.+.
T Consensus 216 ~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~ 251 (409)
T 3jzl_A 216 VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCG 251 (409)
T ss_dssp GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHH
T ss_pred cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHH
Confidence 235776 678999875 24 588889998887664
No 221
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=98.97 E-value=1.5e-08 Score=93.64 Aligned_cols=164 Identities=17% Similarity=0.161 Sum_probs=106.2
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecc-cccCccccCccccccccCCCCcEEEec-cccc---
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI-QCGMGRSGSHFWAFQTQGAVPDIITVG-KPMG--- 163 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv-~tG~gr~G~~~~a~~~~g~~pDiv~~s-K~l~--- 163 (284)
+++++|++... +..|.+.+ +++|.++|++||+++|+|-- ++ +|.... . ..+ .+|+++++ |.++
T Consensus 195 ~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~a-~g~~~~-~---~~~--g~D~~~~s~kk~~~~~ 262 (438)
T 1wyu_A 195 EEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPLS-LGVLKP-P---GAY--GADIAVGDGQSLGLPM 262 (438)
T ss_dssp TTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTTG-GGTBCC-H---HHH--TCSEEEEECTTTTCCC
T ss_pred CCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechhh-ccCcCC-C---ccC--CCCEEEECCcccCCCc
Confidence 45777777764 77888776 99999999999999995521 22 222111 1 112 37888774 7543
Q ss_pred --CCcceeEEEecHHHHHhch------------------------------h----------------------------
Q psy11784 164 --NGMPIGAVITSRKIAESLN------------------------------C---------------------------- 183 (284)
Q Consensus 164 --~G~p~gav~~~~~i~~~~~------------------------------~---------------------------- 183 (284)
+|..+|++++++++.+.+. .
T Consensus 263 ~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~ 342 (438)
T 1wyu_A 263 GFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL 342 (438)
T ss_dssp GGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHH
Confidence 2345788888877654330 0
Q ss_pred ---hhhHHHHHHHHHHHHHhccCc--------eeEEEEecccHHHHHHHHHHHHCCcEE--eecCCC-CCEEEEEcCCCC
Q psy11784 184 ---LDDNRPSGKYLVRPLGINLHI--------FWCLILLSITYYLYRYTRRMKEAKIIV--ANEGEY-GNVLLFLPAMCL 249 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~~G~--------~~~i~~~~~~~~~~~~~~~l~~~Gv~~--~~~~~~-~~~lr~~p~l~~ 249 (284)
.++..++.+++.+.|+++.|+ +..+.+. ......++++.|.++||.+ .++... .+.+|+++...+
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~ 421 (438)
T 1wyu_A 343 REVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALA-LPKDPEAVRRALAERGFHGATPVPREYGENLALFAATELH 421 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEE-CSSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEe-CCCCHHHHHHHHHHCCceeccccccccCCCeEEEEecccC
Confidence 113444556666666654122 2222221 1124678999999999998 444322 579999999889
Q ss_pred CHHHHHHHHHHHHHHH
Q psy11784 250 TTENVLFIVSTLNRIF 265 (284)
Q Consensus 250 t~~~id~~~~~l~~~l 265 (284)
|++|+++++++|++++
T Consensus 422 t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 422 EEEDLLALREALKEVL 437 (438)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 222
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=98.96 E-value=2.3e-08 Score=90.87 Aligned_cols=176 Identities=16% Similarity=0.139 Sum_probs=106.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pDi 155 (284)
.+++++.+...+.++.+|+ |+. ..|...+ +++|.++|+ ||+++|.|++|+ +|-. +..... +...|+
T Consensus 116 ~~~l~~~i~~~~~~tk~v~--~~~-~~G~~~~----~~~i~~la~-~~~~vi~D~a~a-~g~~----~~~~~~g~~~~d~ 182 (377)
T 3ju7_A 116 KTVLWDKIEELKEEVAIVV--PYA-TFGSWMN----LEEYEELEK-KGVPVVVDAAPG-FGLM----NGGMHYGQDFSGM 182 (377)
T ss_dssp HHHHHHHHHHHGGGEEEEC--CBC-GGGBCCC----CHHHHHHHH-TTCCBEEECTTC-TTCE----ETTEETTTTCSSE
T ss_pred HHHHHHHHhcCCCCceEEE--EEC-CCCCccC----HHHHHHHHh-cCCEEEEECCCc-cCCe----ECCEeccCCCCcE
Confidence 6778887732112366676 322 2455444 899999999 999999999997 4321 111122 223577
Q ss_pred EEec----ccccCCcceeEEEec-HHHHHhchh---------------------------------------hhhHHHHH
Q psy11784 156 ITVG----KPMGNGMPIGAVITS-RKIAESLNC---------------------------------------LDDNRPSG 191 (284)
Q Consensus 156 v~~s----K~l~~G~p~gav~~~-~~i~~~~~~---------------------------------------l~~~~~~~ 191 (284)
.++| |.+++| ..|+++.+ +++.+.+.. +++.+++.
T Consensus 183 ~~~S~~~~K~l~~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~ 261 (377)
T 3ju7_A 183 IIYSFHATKPFGIG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRIS 261 (377)
T ss_dssp EEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEECCCCCcCCCC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665 999875 45666654 555443221 22445566
Q ss_pred HHHHHHHHhccC--c-------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC--------C-----------
Q psy11784 192 KYLVRPLGINLH--I-------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE--------Y----------- 237 (284)
Q Consensus 192 ~~l~~~L~~~~G--~-------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------~----------- 237 (284)
+++.+.|+++.+ . ++.+.+ +.......+.+.|.++||.++...+ +
T Consensus 262 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~ 340 (377)
T 3ju7_A 262 EWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILC-PEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRT 340 (377)
T ss_dssp HHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEEC-CTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHH
T ss_pred HHHHHHhcCCCCccccccCCCCCcceEEEEEEEe-CChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHH
Confidence 677777765411 0 112222 2222377899999999998865321 0
Q ss_pred ----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 238 ----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 238 ----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...||+......|++|++++++.|.+++..
T Consensus 341 ~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 341 NKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred HHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 136787666678999999999999887754
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=98.95 E-value=1.5e-08 Score=99.59 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 216 YLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 216 ~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+..+.+.|.++||++...+ .+.+|+.++..+|+++++.+++.|.++.+.+.
T Consensus 516 ~~~~l~~~L~e~GI~v~~~~--~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 516 PATIVANYLRDHGIIPEKSD--LNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp CHHHHHHHHHHTTCCCSEEC--SSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcEEEECC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 46788999999999997643 57899999999999999999999999987764
No 224
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.91 E-value=1.1e-07 Score=88.08 Aligned_cols=169 Identities=11% Similarity=0.030 Sum_probs=97.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcc----eecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccC
Q psy11784 77 AQAARNIMEAHRDNIATLICEP----VFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Ep----v~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.+++++.+++ .+++.+|++|+ ..+..|.+.+ +++|.++|++ ||+++|+||+|..+..... .. .
T Consensus 164 ~e~l~~~i~~-~~~tklV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~-p~-----~ 232 (427)
T 3hvy_A 164 INTVKEELKK-DDSIKLIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKE-PT-----D 232 (427)
T ss_dssp HHHHHHHHHH-CTTEEEEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSC-GG-----G
T ss_pred HHHHHHHhhC-CCCCEEEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCC-Cc-----c
Confidence 6778888763 24589999999 6666665544 9999999999 8999999999964311111 11 1
Q ss_pred CCCcEE--EecccccCC--cceeEEEecHHHHHhchhhhh---H-------HHHHHHHHHHHHhccCceeEEEEecccHH
Q psy11784 151 AVPDII--TVGKPMGNG--MPIGAVITSRKIAESLNCLDD---N-------RPSGKYLVRPLGINLHIFWCLILLSITYY 216 (284)
Q Consensus 151 ~~pDiv--~~sK~l~~G--~p~gav~~~~~i~~~~~~l~~---~-------~~~~~~l~~~L~~~~G~~~~i~~~~~~~~ 216 (284)
...|++ +++|.++++ ...|++++++++++.+..... + ......+.+.|..+ . .........
T Consensus 233 ~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~-~----~r~~~~~~~ 307 (427)
T 3hvy_A 233 VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMA-P----HVTIEAVKG 307 (427)
T ss_dssp GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH-H----HHHHHHHHH
T ss_pred cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHH-H----HHHHHHHHH
Confidence 224665 678999875 345888889988876643000 0 00011111111110 0 000011234
Q ss_pred HHHHHHHHHHCCcEEeecCCCC--C-EEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGEYG--N-VLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~~~--~-~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+..+.+.|.+.|+-+.|..... + .+.|.. -+++...++++.|...
T Consensus 308 a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l---~~~~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 308 AVFCARIMELAGFDVLPKYNDKRTDIIQAIKF---NDEKKLIDFIKGIQTA 355 (427)
T ss_dssp HHHHHHHHHHTTCEEESCTTSCCSSSEEEEEC---SSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCeecCCCCCCCceEEEEEeC---CCHHHHHHHHHHhccc
Confidence 5566667777777665442110 1 344432 2677777888877663
No 225
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.88 E-value=2e-07 Score=86.29 Aligned_cols=95 Identities=11% Similarity=0.120 Sum_probs=69.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcc----eecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccC
Q psy11784 77 AQAARNIMEAHRDNIATLICEP----VFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Ep----v~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.+++++.+++ .+++.+|++++ ..+..|.+.+ +++|.++|++ ||+++|+||+|..+..... .. .
T Consensus 164 ~e~l~~~l~~-~~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~-p~-----~ 232 (427)
T 3i16_A 164 LEEIEKVLKE-DESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKE-PT-----D 232 (427)
T ss_dssp HHHHHHHHHT-CTTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSC-GG-----G
T ss_pred HHHHHHHhhC-CCCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCC-cc-----c
Confidence 6778888863 14689999999 6666676654 9999999999 9999999999974311111 11 1
Q ss_pred CCCcEE--EecccccCC--cceeEEEecHHHHHhch
Q psy11784 151 AVPDII--TVGKPMGNG--MPIGAVITSRKIAESLN 182 (284)
Q Consensus 151 ~~pDiv--~~sK~l~~G--~p~gav~~~~~i~~~~~ 182 (284)
...|++ +++|.++++ ...|++++++++++.+.
T Consensus 233 ~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~ 268 (427)
T 3i16_A 233 VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTS 268 (427)
T ss_dssp GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHH
T ss_pred cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHH
Confidence 234665 678999874 34688889999887664
No 226
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.88 E-value=5.9e-08 Score=89.66 Aligned_cols=188 Identities=12% Similarity=0.087 Sum_probs=120.5
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-CCc
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-VPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~pD 154 (284)
.+.++++|++++ +.+++|++.|-.-.++.... +++|.++|++||+++++||+|-+.-+... .+..+.+.. ..|
T Consensus 202 ~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~~-~lp~sA~~~GrAD 276 (501)
T 3hl2_A 202 LKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKCM-HLIQQGARVGRID 276 (501)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHHH-HHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhhh-hhHHHHHhcCCCc
Confidence 688999998775 44888887764332233344 99999999999999999999965422111 111111222 589
Q ss_pred EEEec--ccccCCcceeE-EE-e-cHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 IITVG--KPMGNGMPIGA-VI-T-SRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 iv~~s--K~l~~G~p~ga-v~-~-~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+++.| |.+- .|+|. ++ . .++.++.+.. +++..++.++|++.|++
T Consensus 277 ~vVqS~HK~ll--vpIGG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~ 354 (501)
T 3hl2_A 277 AFVQSLDKNFM--VPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK 354 (501)
T ss_dssp EEEEEHHHHHC--CCSSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccce--eecCceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877 5542 24433 33 3 4455554432 44667788889999888
Q ss_pred c---cC----------ceeEEEEec----ccHHHHHHHHHHHHCCc---EEeecCC-------------------CCCEE
Q psy11784 201 N---LH----------IFWCLILLS----ITYYLYRYTRRMKEAKI---IVANEGE-------------------YGNVL 241 (284)
Q Consensus 201 ~---~G----------~~~~i~~~~----~~~~~~~~~~~l~~~Gv---~~~~~~~-------------------~~~~l 241 (284)
+ .| .-+++.+.. .......+...|+.++| -+.+.+. -..++
T Consensus 355 la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl 434 (501)
T 3hl2_A 355 LSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYL 434 (501)
T ss_dssp HHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEE
T ss_pred HHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHH
Confidence 7 11 223444431 12245678888888865 3322211 12478
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 242 LFLPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 242 r~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
-..-.+-++++|||.++++|++++.++.++
T Consensus 435 ~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 435 NAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 888888899999999999999999988654
No 227
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.82 E-value=2.4e-07 Score=85.86 Aligned_cols=190 Identities=8% Similarity=-0.015 Sum_probs=116.6
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-CCc
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-VPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~pD 154 (284)
.+.|+++|++++ +.+++|++-|-....|..-+ +++|.++|++||++|++||+|.+.-+... .+..+.+.. ..|
T Consensus 184 ~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~-~l~~~a~~~~~AD 258 (450)
T 3bc8_A 184 LKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYDIPHVVNNAYGLQSSKCM-HLIQQGARVGRID 258 (450)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHH-HHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HHHHHHHHHHCCCeEEEECCCchhhhhhH-hHHHHHhcccCCC
Confidence 788999998665 35888888775444445555 99999999999999999999975422211 011011111 468
Q ss_pred EEEec--ccccCCcceeEEEe-cHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhcc
Q psy11784 155 IITVG--KPMGNGMPIGAVIT-SRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGINL 202 (284)
Q Consensus 155 iv~~s--K~l~~G~p~gav~~-~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~~ 202 (284)
++++| |.+..-+..+.+.. .++..+.+.. +++..++.+++++.|+++.
T Consensus 259 ~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 259 AFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp EEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCCchhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 88776 77765445566665 3444333222 1122556677787777652
Q ss_pred ---Cce------e----EEEEe----cccHHHHHHHHHHHHCCc---EEe-------------ec------CCCCCEEEE
Q psy11784 203 ---HIF------W----CLILL----SITYYLYRYTRRMKEAKI---IVA-------------NE------GEYGNVLLF 243 (284)
Q Consensus 203 ---G~~------~----~i~~~----~~~~~~~~~~~~l~~~Gv---~~~-------------~~------~~~~~~lr~ 243 (284)
|.. . .+.+. ....+..++.-.+...|+ -+. .. -...+.+-+
T Consensus 339 ~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~ 418 (450)
T 3bc8_A 339 EAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNA 418 (450)
T ss_dssp HHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEE
T ss_pred HhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEE
Confidence 431 1 12111 001234566666666652 222 00 123457778
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 244 LPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 244 ~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
..++..+++|++.++++|+++.++..++
T Consensus 419 ~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 419 AAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999998776543
No 228
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.82 E-value=6.3e-08 Score=86.79 Aligned_cols=158 Identities=13% Similarity=0.082 Sum_probs=104.2
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--EecccccC-C
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--TVGKPMGN-G 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~~sK~l~~-G 165 (284)
+++.+|++-+..+..|....+ +++| ||+++|+||+|. +|.. ..... .. |++ +++|.++. |
T Consensus 141 ~~t~~v~~~~~~n~tG~~~~~---l~~i------~~~~vivD~a~~-~~~~---~~~~~--~~--d~~~~s~~K~~g~~G 203 (362)
T 2c0r_A 141 DNAAYLHLTSNETIEGAQFKA---FPDT------GSVPLIGDMSSD-ILSR---PFDLN--QF--GLVYAGAQKNLGPSG 203 (362)
T ss_dssp TTEEEEEEESEETTTTEECSS---CCCC------TTSCEEEECTTT-TTSS---CCCGG--GC--SEEEEETTTTTCCSS
T ss_pred CCcCEEEEeCCcCccceeccc---cccc------CCCEEEEEChhh-ccCC---ccchh--HC--cEEEEeccccccCcC
Confidence 457778777667778875322 4444 899999999997 3211 11111 12 765 56899962 4
Q ss_pred cceeEEEecHHHHHhch----------------h----------------h-------------hhHHHHHHHHHHHHHh
Q psy11784 166 MPIGAVITSRKIAESLN----------------C----------------L-------------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~----------------~----------------l-------------~~~~~~~~~l~~~L~~ 200 (284)
+|++++++++.+.+. . + ++.+++.+++.+.|++
T Consensus 204 --~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 281 (362)
T 2c0r_A 204 --VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ 281 (362)
T ss_dssp --CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999888754431 0 1 1344455666666665
Q ss_pred ccC-c-------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 NLH-I-------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~~G-~-------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ | + ++.+.+ +......++++.|.++||.+.++....+.+|+++....|++|++++++.|+++++
T Consensus 282 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 282 S-GGFYRGCVDVDSRSDMNITFRL-ASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp S-TTSSEESSCGGGBCSSEEEEEC-SCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred c-CCccccCCChHHcCCcEEEEEc-CCcchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3 3 2 112222 2234567899999999998877544456799998888899999999999998876
Q ss_pred H
Q psy11784 267 S 267 (284)
Q Consensus 267 ~ 267 (284)
+
T Consensus 360 ~ 360 (362)
T 2c0r_A 360 S 360 (362)
T ss_dssp H
T ss_pred h
Confidence 4
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=98.75 E-value=1.7e-07 Score=92.58 Aligned_cols=50 Identities=18% Similarity=0.106 Sum_probs=42.4
Q ss_pred HHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 218 YRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
..+.+.|.++||.+... ..+.+|+.+++..|+++++.+++.|.++.+...
T Consensus 557 ~~l~~~L~~~gI~~e~~--~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 557 ALVTAWLGRHGIVPTRT--TDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp HHHHHHHHTTTCCCSEE--CSSEEEEECCTTCCTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEeec--CCCeEEEEECCCCCHHHHHHHHHHHHHHHHhhh
Confidence 67888888899988654 357899999999999999999999998877654
No 230
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.71 E-value=7.7e-08 Score=87.67 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=96.0
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHH-hC--CEEEEecccccCccccCccccccccCCCCcEEEeccccc-CC
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE-IG--GVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG-NG 165 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~-~g--~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~-~G 165 (284)
++.+|++...++..|.+.. +| |++ |+ +++|.||+|. ++.. . .+.. ..+..--+-+|||.++ .|
T Consensus 157 ~~k~v~l~~p~NPtG~~~~------~l---~~~~~~~~~~ii~De~y~-~~~~-~-~l~~-~~~~~i~~~S~SK~~g~~G 223 (391)
T 3bwn_A 157 GPYIELVTSPNNPDGTIRE------TV---VNRPDDDEAKVIHDFAYY-WPHY-T-PITR-RQDHDIMLFTFSKITGHAG 223 (391)
T ss_dssp SCEEEEEESSCTTTCCCCC------CC---C-----CCCEEEEECTTC-STTT-S-CCCC-CBCCSEEEEEHHHHHSCGG
T ss_pred CCEEEEECCCCCCCchhHH------HH---HHHhhcCCCEEEEeCCCC-CCCC-C-cccc-CCCCeEEEEechhhcCCCc
Confidence 4666766444666776652 23 434 66 9999999996 2211 1 1111 1222222347899997 68
Q ss_pred cceeEEEe-cHHHHHhchh--------------------hh---------------------hHHHHHHHHHHHHHhccC
Q psy11784 166 MPIGAVIT-SRKIAESLNC--------------------LD---------------------DNRPSGKYLVRPLGINLH 203 (284)
Q Consensus 166 ~p~gav~~-~~~i~~~~~~--------------------l~---------------------~~~~~~~~l~~~L~~~~G 203 (284)
+++|++++ ++++++.+.. ++ .++++.+++.+.|+++.|
T Consensus 224 lRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 303 (391)
T 3bwn_A 224 SRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDA 303 (391)
T ss_dssp GCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred cceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999997 8888776544 11 122344455555554311
Q ss_pred ----------------------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC---CCEEEEEcCCCCCHHHHHHHH
Q psy11784 204 ----------------------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY---GNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 204 ----------------------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~~lr~~p~l~~t~~~id~~~ 258 (284)
+++++.+ +.. ..+.+.|.++||.+.++..+ .+.+|++.. .+++++++++
T Consensus 304 ~~~~~p~~~~~~f~~~~~~~~g~~~~~~~-~~~---~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~ 377 (391)
T 3bwn_A 304 FTLPKYPEAFCNYFGKSLESYPAFAWLGT-KEE---TDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFL 377 (391)
T ss_dssp EECCCCCCEEETTTTEEECCCCSEEEEEE-SSS---CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHH
T ss_pred cccccCCccccccccccCCCcceEEEecC-CcH---HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHH
Confidence 1344555 221 34556677899999987544 468999765 4899999999
Q ss_pred HHHHHHHHH
Q psy11784 259 STLNRIFTS 267 (284)
Q Consensus 259 ~~l~~~l~~ 267 (284)
++|.+++++
T Consensus 378 ~~L~~~~~~ 386 (391)
T 3bwn_A 378 ERLANMKLI 386 (391)
T ss_dssp HHHHSCC--
T ss_pred HHHHHHHHh
Confidence 999887654
No 231
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.36 E-value=1.4e-05 Score=78.26 Aligned_cols=180 Identities=13% Similarity=0.165 Sum_probs=109.7
Q ss_pred HHHHHHHHHhcCCC---eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-cc--ccC
Q psy11784 77 AQAARNIMEAHRDN---IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQ--TQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~---vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~--~~g 150 (284)
.++|++.++++++. .+.|++.| +..|...+ +++|.++|++++ +|+||+|.+.-..|. .+. .. ..+
T Consensus 282 ~e~Le~~l~~~~~~k~p~~vivt~p--n~~G~v~d----l~~I~ela~~~~--livDEAH~~~~~f~~-~~~~~~al~~g 352 (715)
T 3n75_A 282 HATIAKRVKETPNATWPVHAVITNS--TYDGLLYN----TDFIKKTLDVKS--IHFDSAWVPYTNFSP-IYEGKCGMSGG 352 (715)
T ss_dssp HHHHHHHHHHSTTCCSCSEEEEESS--CTTSEEEC----HHHHHHHCCCSE--EEEECTTCTTGGGSG-GGTTSSTTSSS
T ss_pred HHHHHHHHhhCcCccCceEEEEECC--CCCCccCC----HHHHHHHhCcCc--EEEccccccccccCC-ccccccccccC
Confidence 67888888754321 25677788 77888887 999999998774 799999973212222 111 11 122
Q ss_pred CCCcEE-----EecccccCCc-ceeEEEecHHHH-Hhchh---------------------------------hhhHHHH
Q psy11784 151 AVPDII-----TVGKPMGNGM-PIGAVITSRKIA-ESLNC---------------------------------LDDNRPS 190 (284)
Q Consensus 151 ~~pDiv-----~~sK~l~~G~-p~gav~~~~~i~-~~~~~---------------------------------l~~~~~~ 190 (284)
..+|++ +++|++++ + ..|++.++.++. +.+.. ++++.++
T Consensus 353 ~~aD~vii~~~S~hKtL~g-ltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~ 431 (715)
T 3n75_A 353 RVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIER 431 (715)
T ss_dssp CCTTCEEEEEECHHHHSSC-CTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEecccccccC-CCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 236754 56799875 2 236666654321 11111 2244556
Q ss_pred HHHHHHHHHhcc----Cce--------------eE-------------------EE-----Ee-cc----------cHHH
Q psy11784 191 GKYLVRPLGINL----HIF--------------WC-------------------LI-----LL-SI----------TYYL 217 (284)
Q Consensus 191 ~~~l~~~L~~~~----G~~--------------~~-------------------i~-----~~-~~----------~~~~ 217 (284)
.++++++|+++. |.+ +. ++ +. +. .-.+
T Consensus 432 a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g 511 (715)
T 3n75_A 432 AIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPA 511 (715)
T ss_dssp HHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCH
T ss_pred HHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcH
Confidence 667777776642 211 00 11 10 11 1134
Q ss_pred HHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 218 YRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
..+.+.|.++||.+--.. .+.+-+..+...|+++++.++++|.++-+..
T Consensus 512 ~~~~~~L~~~~I~~E~~d--~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 512 SIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp HHHHHHHHHTTCCCSEEE--TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEecC--CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 577888888999887543 4667777788889999999999998776544
No 232
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.35 E-value=4.1e-06 Score=76.16 Aligned_cols=163 Identities=10% Similarity=0.015 Sum_probs=101.7
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecccccCCcce
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G~p~ 168 (284)
+++..|.+--.-...|.+.| + +|+++|+++++|=+|+ +|.. .+-.+.+++ ...+--|.+| .-.+
T Consensus 151 ~~t~lV~~~h~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~g~~---~id~~~~~~--~~~s~~K~~g-p~G~ 214 (377)
T 3e77_A 151 PDASYVYYCANETVHGVEFD----F-----IPDVKGAVLVCDMSSN-FLSK---PVDVSKFGV--IFAGAQKNVG-SAGV 214 (377)
T ss_dssp TTCSCEEEESEETTTTEECS----S-----CCCCTTCCEEEECTTT-TTSS---CCCGGGCSE--EEEEGGGTTS-CTTC
T ss_pred CCccEEEEeCccCchheEch----h-----hhccCCCEEEEEcccc-cCCC---CCchhhcCE--EEEecccccC-CCcc
Confidence 44555544344444577766 2 4789999999999997 4321 233344442 2222338883 3347
Q ss_pred eEEEecHHHHHhchh---------------------------------------------hhhHHHHHHHHHHHHHhccC
Q psy11784 169 GAVITSRKIAESLNC---------------------------------------------LDDNRPSGKYLVRPLGINLH 203 (284)
Q Consensus 169 gav~~~~~i~~~~~~---------------------------------------------l~~~~~~~~~l~~~L~~~~G 203 (284)
|+++.++++.+.+.. .++.+++.+++.+.|+++.|
T Consensus 215 g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g 294 (377)
T 3e77_A 215 TVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQG 294 (377)
T ss_dssp EEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred EEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 777777765322110 12455667778888876523
Q ss_pred ce-------------eEEEEec---ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 204 IF-------------WCLILLS---ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 204 ~~-------------~~i~~~~---~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+. +.+.+.. +......+...+.++||.+.++....+.+|+++....|++|||.+++.|++++++
T Consensus 295 ~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 295 FYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp SEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 32 3344421 1122246778888999998765333356999999999999999999999988764
No 233
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.25 E-value=3.6e-05 Score=69.49 Aligned_cols=159 Identities=11% Similarity=0.030 Sum_probs=100.6
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGM 166 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~ 166 (284)
+++..|.+--.-...|.+.+. +|+ +|+++++|-+|+ +|.. .+-.+ ..|++++| |.+| .-
T Consensus 139 ~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g~~---~id~~----~~d~~~~s~~K~~g-p~ 199 (361)
T 3m5u_A 139 DNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FFSR---KVDFS----NIALFYGGVQKNAG-IS 199 (361)
T ss_dssp TTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TTSS---CCCCT----TEEEEEEETTTTSS-CT
T ss_pred CCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cCCC---CCCcc----cCCEEEEechhccC-CC
Confidence 345555543333445776442 344 499999999997 4321 12222 25787776 9883 33
Q ss_pred ceeEEEecHHHHHhchh----------------------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 167 PIGAVITSRKIAESLNC----------------------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~----------------------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
.+|+++.++++.+.+.. .++.+++.+++.++|++
T Consensus 200 G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~ 279 (361)
T 3m5u_A 200 GLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL 279 (361)
T ss_dssp TCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999887643210 12455667777788876
Q ss_pred ccCc-------------eeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 NLHI-------------FWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~~G~-------------~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+.|+ .+.+.+ +. ......+...|.++||.+.++...-+.+|+++....|++|||.+++.|+++.+
T Consensus 280 ~~g~~~~~~~~~~rs~~ivsf~~-~~~~~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 280 SNGFYKGHADKKDRSLMNVSFNI-AKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp STTSEEESSCGGGBCSSEEEEEE-SSCTTHHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCeeeccCCHHHcCCeEEEEEC-CCchhhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 4223 223333 22 11224677888899999876532225699999999999999999999998875
Q ss_pred H
Q psy11784 267 S 267 (284)
Q Consensus 267 ~ 267 (284)
+
T Consensus 359 ~ 359 (361)
T 3m5u_A 359 K 359 (361)
T ss_dssp H
T ss_pred h
Confidence 4
No 234
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=98.22 E-value=1.5e-05 Score=72.64 Aligned_cols=161 Identities=13% Similarity=-0.020 Sum_probs=100.4
Q ss_pred CCeeEEEEcceecCCCcc-cCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecccccCCcc
Q psy11784 89 DNIATLICEPVFVVHGAV-VPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMP 167 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~-~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G~p 167 (284)
+++..|.+--.....|.+ .| +++| + +|+++++|=+|+ +|.. .+-.+.+++ +..+--|.+| ...
T Consensus 165 ~~t~lV~~~h~et~tG~~i~p----i~~i---~--~g~~~~vDa~qs-~g~~---pidv~~~~~--~~~s~hK~lG-P~G 228 (386)
T 3qm2_A 165 DNAAYLHYCPNETIDGIAIDE----TPDF---G--PEVVVTADFSST-ILSA---PLDVSRYGV--IYAGAQKNIG-PAG 228 (386)
T ss_dssp TTCSCEEECSEETTTTEECCC----CCCC---C--TTCCEEEECTTT-TTSS---CCCGGGCSE--EEEETTTTTC-CTT
T ss_pred CCCcEEEEECCcCCcCEecCc----hhhh---c--CCCEEEEEcccc-cCCC---CCCccccCE--EEEecccccC-CCc
Confidence 445556665666666875 44 3333 2 899999999997 4321 233344442 3333348883 334
Q ss_pred eeEEEecHHHHHhchh--------------------------------h-------------hhHHHHHHHHHHHHHhcc
Q psy11784 168 IGAVITSRKIAESLNC--------------------------------L-------------DDNRPSGKYLVRPLGINL 202 (284)
Q Consensus 168 ~gav~~~~~i~~~~~~--------------------------------l-------------~~~~~~~~~l~~~L~~~~ 202 (284)
+|+++.++++.+.+.. + ++.+++.+++.+.|+++
T Consensus 229 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~- 307 (386)
T 3qm2_A 229 LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS- 307 (386)
T ss_dssp EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-
Confidence 7888888776321110 1 14455667777777764
Q ss_pred Cc-------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 203 HI-------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 203 G~-------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
|+ .+.+.+ +.......+...|.++||.+..+....+.+|+++....|++|||.+++.|+++.++
T Consensus 308 ~~~~~~~~~~~rs~~iv~f~~-~~~~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 308 DFYRNDVAQANRSRMNVPFQL-ADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp SSEECCBCGGGBCSSEEEEEE-SSGGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCHHHcCceEEEEEC-CCccccHHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 32 233344 22122256777888999998764222245999999889999999999999988754
No 235
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.17 E-value=1.8e-05 Score=72.85 Aligned_cols=155 Identities=13% Similarity=0.036 Sum_probs=95.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--Eeccccc-CCc
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--TVGKPMG-NGM 166 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~~sK~l~-~G~ 166 (284)
++.+|++...++..|.+.. +.+ + ++..|.||++-. . ...........+++ +|||.++ .|+
T Consensus 196 ~~k~v~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~-----~-~~s~~~~~~~~~i~~~S~SK~~g~~G~ 258 (427)
T 2hox_A 196 EQYIEMVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW-----P-HYTPIKYKADEDILLFTMSKFTGHSGS 258 (427)
T ss_dssp GGEEEEEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS-----T-TTSCCCSCBCCSEEEEEHHHHTSCGGG
T ss_pred CceEEEEcCCCCCcccccH--HHH-------c--CCCEEEeecccC-----C-CCCccccCCCceEEEEeChhcCCCCCc
Confidence 4566666544566676554 322 2 566788877632 1 11111111123444 6899998 689
Q ss_pred ceeEEEe-cHHHHHhchh--------------------hh----------------------hHHHHHHHHHHHHHhcc-
Q psy11784 167 PIGAVIT-SRKIAESLNC--------------------LD----------------------DNRPSGKYLVRPLGINL- 202 (284)
Q Consensus 167 p~gav~~-~~~i~~~~~~--------------------l~----------------------~~~~~~~~l~~~L~~~~- 202 (284)
++|++++ ++++++.+.. ++ +++++.+++.+.|++..
T Consensus 259 RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 259 RFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred eEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999 4888776644 11 12333445555555421
Q ss_pred ----------------------CceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC---CCEEEEEcCCCCCHHHHHH
Q psy11784 203 ----------------------HIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY---GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 203 ----------------------G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~---~~~lr~~p~l~~t~~~id~ 256 (284)
|+++++.+. . ...++++.|+ ++||++.++..+ .+++|++.. .+++++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~-~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~ 413 (427)
T 2hox_A 339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCE-W--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQ 413 (427)
T ss_dssp EECCCCCSCEEETTTTEEECCCCSEEEEEEC-S--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHH
T ss_pred ccccccccccccccccccCCCCceEEEEECC-C--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHH
Confidence 445556663 2 2345777765 789999987543 468999765 48999999
Q ss_pred HHHHHHHHHH
Q psy11784 257 IVSTLNRIFT 266 (284)
Q Consensus 257 ~~~~l~~~l~ 266 (284)
++++|.++++
T Consensus 414 ~l~~l~~~~~ 423 (427)
T 2hox_A 414 LMYYLKDMVK 423 (427)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988763
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.76 E-value=0.0015 Score=60.19 Aligned_cols=177 Identities=11% Similarity=0.041 Sum_probs=110.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.+.++++..++++.+ ||+- +...+-.--+++++++|++.|++|++|=+|. |+=-.|. +. ..+.. .|+
T Consensus 192 yd~~~~~A~~~kPkl--Ii~G------~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~--~p-sP~~~-ADv 259 (490)
T 3ou5_A 192 YNQLALTARLFRPRL--IIAG------TSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKV--IP-SPFKH-ADI 259 (490)
T ss_dssp HHHHHHHHHHHCCSE--EEEC------CSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS--SC-CGGGT-CSE
T ss_pred HHHHHHHHhhcCCCe--EEEC------CccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccc--cC-Ccccc-ceE
Confidence 577888777666663 3322 2122222238999999999999999999986 5411121 11 12222 689
Q ss_pred EEec--ccccCCcceeEEEecH---------------HHHHhchh---------------------------------hh
Q psy11784 156 ITVG--KPMGNGMPIGAVITSR---------------KIAESLNC---------------------------------LD 185 (284)
Q Consensus 156 v~~s--K~l~~G~p~gav~~~~---------------~i~~~~~~---------------------------------l~ 185 (284)
||.+ |.|.|- +-|.+++++ ++.+.+.. .+
T Consensus 260 VTtTTHKTLrGP-rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~ 338 (490)
T 3ou5_A 260 VTTTTHKTLRGA-RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp EEEESSSTTCSC-SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred EeccccccccCC-CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHH
Confidence 8765 999861 235566554 22222221 23
Q ss_pred hHHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-------CCCCEEEEEcCCC-
Q psy11784 186 DNRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------EYGNVLLFLPAMC- 248 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~lr~~p~l~- 248 (284)
++.++++.|.+.|.+. ...++.+++.+.........+.|-+.||.+.... ...+-|||-.|..
T Consensus 339 qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~T 418 (490)
T 3ou5_A 339 QVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALT 418 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHH
Confidence 6667777888888775 2235566664433345666677778899886321 1235789876654
Q ss_pred ---CCHHHHHHHHHHHHHHHH
Q psy11784 249 ---LTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 249 ---~t~~~id~~~~~l~~~l~ 266 (284)
+.++|++++.+.|.+++.
T Consensus 419 tRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 419 SRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HTTCCHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999988775
No 237
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=51.64 E-value=29 Score=29.70 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=28.6
Q ss_pred Cee--EEEEcceecCCCccc-CC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIA--TLICEPVFVVHGAVV-PP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~va--avi~Epv~~~~G~~~-~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++. .||+|+++....... .. ..+++.|..+|+++|+.+|+
T Consensus 179 ~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~ 226 (315)
T 3bh0_A 179 PGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 226 (315)
T ss_dssp SSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 466 899999987632111 11 25678899999999987776
No 238
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=50.43 E-value=22 Score=31.17 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=31.7
Q ss_pred CeeEEEEcceecCCCcc------cCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 90 NIATLICEPVFVVHGAV------VPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~------~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
++..||+|++|-+.+.. .-=.++.+.|+.+|+++|+.+|+=
T Consensus 156 g~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 156 ELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp TEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 68999999998875421 112367899999999999988874
No 239
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=49.11 E-value=37 Score=27.36 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=32.0
Q ss_pred HHHHHHHHHhc-CCCeeEEEEcceecC---CCc-ccCChhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIMEAH-RDNIATLICEPVFVV---HGA-VVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~vaavi~Epv~~~---~G~-~~~~~~~l~~l~~l~~~~g~llI 128 (284)
.+.|+++++.. ..+...|++.|..-. .|. ......|-+.++++|+++|+.+|
T Consensus 111 ~~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 111 PAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 34455555421 123455778876332 232 23456788999999999998776
No 240
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=47.91 E-value=35 Score=27.63 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=29.4
Q ss_pred CCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 88 RDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 88 ~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-..++||+|-+ ....|...- +.++.+++++||+.+|.
T Consensus 156 Gl~Pa~vicEiv~~~~dG~mar----~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 156 GLQPAGAICEIVSQKDEGSMAH----TDELRVFADEHGLALIT 194 (206)
T ss_dssp TSCSBEEEEEBBCSSSTTSBCC----HHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEEeeeCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 334789999984 445565555 88999999999999874
No 241
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=43.67 E-value=27 Score=28.51 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=28.2
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
-..++||+|-+ ...|.... +.++.+++++||+.+|.
T Consensus 166 l~Pa~vicEi~-~~dG~mar----~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 166 FKPAGVLCELT-NDDGTMAR----APECIEFANKHNMALVT 201 (217)
T ss_dssp SCSCEEEEEBB-CTTSSBCC----HHHHHHHHHHTTCEEEE
T ss_pred CCceEEEEEEe-CCCCCccC----HHHHHHHHHHcCCCEEE
Confidence 34788999866 45566565 88999999999998874
No 242
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=42.35 E-value=43 Score=21.90 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 238 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+..++++||-..|.++-++-...++.++..-
T Consensus 17 ~KsL~Lf~P~gLt~~Q~~QW~~TIeav~qSa 47 (75)
T 2fqm_A 17 GKTLRLTLPEGLSGEQKSQWMLTIKAVVQSA 47 (75)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCccHHHHHHHHHHHHHHHhhh
Confidence 5689999999999999999999998887653
No 243
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=42.29 E-value=60 Score=27.13 Aligned_cols=53 Identities=9% Similarity=0.063 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCccc---------CChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVV---------PPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~---------~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++++++....=+=+|+=|-....|... .+..+++.|.++|+++++.+|+
T Consensus 39 l~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~ 100 (281)
T 3p8k_A 39 ETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVA 100 (281)
T ss_dssp HHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEE
Confidence 5556666653322223456667666555432 2367899999999999998775
No 244
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=41.70 E-value=43 Score=30.07 Aligned_cols=47 Identities=9% Similarity=-0.016 Sum_probs=34.9
Q ss_pred CCCeeEEEEcceecC-----C------Ccc---------cCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 88 RDNIATLICEPVFVV-----H------GAV---------VPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 88 ~~~vaavi~Epv~~~-----~------G~~---------~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
.-++.+|.+-|++-. + |.. .-+++-|++|.+-|+++|+-+|+|=|.-
T Consensus 34 ~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 34 PKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp TTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 456999999997432 1 110 1135679999999999999999999964
No 245
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=41.27 E-value=52 Score=26.53 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=29.4
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-..++||+|-+-...|...- +.++.+++++||+.+|.
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar----~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR----LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeECCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 344789999977355566565 88999999999998874
No 246
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=39.86 E-value=21 Score=29.60 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=31.5
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceec---CCCcccCChhH---HHHHHHHHHHhCCEEEEec
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFV---VHGAVVPPPGW---LSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~---~~G~~~~~~~~---l~~l~~l~~~~g~llI~DE 131 (284)
++.++++++ .++..|.+ |+-.. ..|. ..+.++ .++++++|++||+.||+++
T Consensus 46 ~~~~~~al~---~Gv~~vqlR~K~~~~~~~~~~-l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALA---GGVDIIQLRDKGSPGELRFGP-LQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHH---TTCSEEEECCTTCHHHHHHCS-CCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHH---CCCCEEEEccCCCCccccccC-CCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 567777776 45666665 44311 0000 112333 4789999999999999854
No 247
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=38.92 E-value=66 Score=29.38 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=29.2
Q ss_pred CeeEEEEcceecCCCccc-CC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIATLICEPVFVVHGAVV-PP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~-~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++..||+|+++....... .. .++++.|..+++++|+.+|+
T Consensus 354 ~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~ 399 (503)
T 1q57_A 354 GCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVV 399 (503)
T ss_dssp CCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEE
Confidence 578899999977532111 11 25788999999999998876
No 248
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=36.72 E-value=52 Score=30.75 Aligned_cols=48 Identities=6% Similarity=-0.091 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEec
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 131 (284)
.+.++++++ .++..|.+ |+-.. ... -.+..++++++|++||+.||+++
T Consensus 28 ~~~ve~al~---~Gv~~vQlR~K~~~-~~~---~~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQ---NGVTLVQIREKDAD-TKF---FIEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHH---TTCSEEEECCSSSC-TTH---HHHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHH---CCCCEEEEecCCCC-HHH---HHHHHHHHHHHHHhcCCEEEEeC
Confidence 567788886 45767766 33221 111 13456788999999999999865
No 249
>3bww_A Protein of unknown function DUF692/COG3220; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.20A {Haemophilus somnus}
Probab=36.20 E-value=21 Score=30.79 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=32.3
Q ss_pred EEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 94 LICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 94 vi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
|++=.+ .+-||.-+++++||++|++++++++..++.|-.
T Consensus 57 l~~HGv~LSlG~~~pld~~~L~~lk~l~~~~~~~~~SeHL 96 (307)
T 3bww_A 57 ILIHGLSLSLGGQAPLDKELLSSIKAMIKQYNTPFFSDHL 96 (307)
T ss_dssp EEEBCSCCCTTCSSCCCHHHHHHHHHHHHHTTCCCCEECS
T ss_pred EEEeeccccccCCCCCCHHHHHHHHHHHHHHCCCEEEeee
Confidence 444444 455788899999999999999999999999964
No 250
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=35.96 E-value=80 Score=28.50 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=29.0
Q ss_pred Cee--EEEEcceecCCCcc-cCC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIA--TLICEPVFVVHGAV-VPP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~va--avi~Epv~~~~G~~-~~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++. .||+|++|.+.+.. ... .++.+.|..+|+++|+.+|+
T Consensus 308 ~~~~~lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ 355 (444)
T 3bgw_A 308 PGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 355 (444)
T ss_dssp CSSCEEEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 466 89999998764321 112 25668899999999998887
No 251
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=35.22 E-value=61 Score=26.59 Aligned_cols=37 Identities=16% Similarity=0.112 Sum_probs=28.8
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-..++||+|-+. ..|...- ++++.+++++||+.+|.
T Consensus 176 Gl~Pa~VicEi~~-ddG~mar----~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 176 NLVPITTICEMMG-DDGNAMS----KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp TSCSEEEEEEEBC-TTSSBCC----HHHHHHHHHHHTCCEEE
T ss_pred CCCceEEEEEEeC-CCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 3457899999774 4465555 88999999999998874
No 252
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=33.45 E-value=30 Score=28.88 Aligned_cols=22 Identities=9% Similarity=-0.074 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhCCEEEEeccc
Q psy11784 112 WLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 112 ~l~~l~~l~~~~g~llI~DEv~ 133 (284)
.++.+.++|+++|+.+|+|--.
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEecc
Confidence 3578889999999999988643
No 253
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=33.11 E-value=1.2e+02 Score=28.35 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=37.5
Q ss_pred CCeeEEEEcceecC-------CCccc----------CChhHHHHHHHHHHHhCCEEEEecccccCcccc
Q psy11784 89 DNIATLICEPVFVV-------HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG 140 (284)
Q Consensus 89 ~~vaavi~Epv~~~-------~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G 140 (284)
-++-+|.+-|++-. .|.-+ -+.+-+++|.+-|+++|+-+|+|=|..-.+...
T Consensus 160 LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~ 228 (601)
T 3edf_A 160 LGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHH 228 (601)
T ss_dssp TTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred cCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcc
Confidence 46889999998632 12111 234569999999999999999999976444433
No 254
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=32.52 E-value=31 Score=29.75 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCC-eeEEEEcceecCCCcccCC--hhHHHHHHHHHHHhCCEEEEec
Q psy11784 78 QAARNIMEAHRDN-IATLICEPVFVVHGAVVPP--PGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 78 ~~l~~~i~~~~~~-vaavi~Epv~~~~G~~~~~--~~~l~~l~~l~~~~g~llI~DE 131 (284)
++++.+.++.+-+ |..-+. |. .+|...-+ -+.++++.++|+++|+.+|+|=
T Consensus 72 ~~~~~l~~~~G~N~VRi~~~-~~--~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 72 DSLKWLRDDWGITVFRAAMY-TA--DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHTCCSEEEEEEE-SS--TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEeE-EC--CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 3455544444555 544333 21 22322211 3667888899999999999984
No 255
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=31.78 E-value=66 Score=24.39 Aligned_cols=56 Identities=13% Similarity=0.003 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHH-HHHHHhCCE-EEEecccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMY-DYIHEIGGV-VIADEIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~-~l~~~~g~l-lI~DEv~t 134 (284)
.+.|.+++++ .++..|+|+-...++|...+.....+... .+++++++. ..+||-+|
T Consensus 44 ~~~l~~li~~--~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 44 LSRLSELIKD--YTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp HHHHHHHHTT--SEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHH--cCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 6778888873 34667777733455565433222223333 445556765 45699877
No 256
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=31.72 E-value=51 Score=28.59 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHhCCEEEEecccc---------cCccccCccccccccCCCC-cEEEecccccCC
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEIQC---------GMGRSGSHFWAFQTQGAVP-DIITVGKPMGNG 165 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv~t---------G~gr~G~~~~a~~~~g~~p-Div~~sK~l~~G 165 (284)
.++++.+.+.|+++|+.+|=-++.. .+|..-+ .-.....+.+| |.++++|.++++
T Consensus 120 ~~~~~Gi~~~~~~~gv~lvGGdt~~~~~~~i~~t~~G~~~~-~~~~~~~~a~~GD~iivtg~lG~~ 184 (345)
T 2zod_A 120 REVIRGALDKLREAKTVLLGGHTIDDKEPKFGLSVAGICPE-GKYITQSGAQVGQLLILTKPIGTG 184 (345)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEECSSCEEEEEEEEECGG-GCCCCSSCCCTTCEEEECSCBCHH
T ss_pred HHHHHHHHHHHHhccCcccCCceEECCcCcccceeEEEecC-ccccccccCCCCCeEEEcCCCcch
Confidence 4677899999999999999766532 1111100 00112234554 788899998754
No 257
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=31.60 E-value=28 Score=23.75 Aligned_cols=23 Identities=13% Similarity=-0.149 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhCCEEEEecccc
Q psy11784 112 WLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 112 ~l~~l~~l~~~~g~llI~DEv~t 134 (284)
.-.+|++++++||+.++-|.--+
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36899999999999999998654
No 258
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.55 E-value=68 Score=26.92 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=44.0
Q ss_pred EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-ccccCccccccccCCCCcE-EEec
Q psy11784 93 TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-GRSGSHFWAFQTQGAVPDI-ITVG 159 (284)
Q Consensus 93 avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDi-v~~s 159 (284)
-+|||.++|.|-..+ .++.+.++.+...+.+..++.=++=+|+ +-+|. .. .+.+|. +||+
T Consensus 152 dlIIDALfGtGl~~~-l~~~~~~lI~~iN~~~~~VvAVDIPSGldadtG~-~~-----av~Ad~TVTf~ 213 (265)
T 2o8n_A 152 ELVVDAIFGFSFKGD-VREPFHSILSVLSGLTVPIASIDIPSGWDVEKGN-PS-----GIQPDLLISLT 213 (265)
T ss_dssp SEEEEESCCTTCCCC-CCTTHHHHHHHHHTCSSCEEEESSCTTSBTTTBC-TT-----SCCCSEEEEES
T ss_pred cEEEEeeccCCCCCC-CcHHHHHHHHHHHhcCCCEEEEeCCCCcccCCCC-cC-----eeeCCEEEECC
Confidence 589999999865444 4556777778888888888888899998 34554 21 578885 5665
No 259
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=30.89 E-value=35 Score=28.93 Aligned_cols=23 Identities=13% Similarity=-0.074 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHhCCEEEEecc
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv 132 (284)
.+.++++.+.|+++|+.+|+|=-
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H 101 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWH 101 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 36678889999999999999853
No 260
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=30.82 E-value=38 Score=30.40 Aligned_cols=51 Identities=25% Similarity=0.177 Sum_probs=36.1
Q ss_pred CCeeEEEEcceecC---CCccc----------CChhHHHHHHHHHHHhCCEEEEecccccCccc
Q psy11784 89 DNIATLICEPVFVV---HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS 139 (284)
Q Consensus 89 ~~vaavi~Epv~~~---~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~ 139 (284)
-++-+|.+-|++-. .|.-+ -+.+-|++|.+-|+++|+-+|+|=|..-.+..
T Consensus 35 LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~~ 98 (441)
T 1lwj_A 35 LGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFL 98 (441)
T ss_dssp TTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTBCCTT
T ss_pred cCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcccCc
Confidence 35788888887533 22111 13567999999999999999999997544443
No 261
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=30.44 E-value=93 Score=26.83 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC-------Cccc----CChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH-------GAVV----PPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~-------G~~~----~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++.+..+..++..||+|+++... |... .-..+++.|..+++++|+.+|+
T Consensus 206 l~~l~~~i~~~~~~~~lvVIDsl~~l~~~~~~~~g~~~~r~~~l~~~l~~L~~la~~~~~~Vi~ 269 (343)
T 1v5w_A 206 LDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFV 269 (343)
T ss_dssp HHHHHHHHHHSCSSEEEEEEETSGGGHHHHCCGGGCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhcCCCccEEEEechHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 344555565432568899999987542 1100 1246788899999999987765
No 262
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=29.78 E-value=91 Score=25.65 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=28.5
Q ss_pred CCCeeEEEEcceecC----------CCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 88 RDNIATLICEPVFVV----------HGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 88 ~~~vaavi~Epv~~~----------~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-..++||+|-+.-. .|...- +.++.+++++||+.+|.
T Consensus 165 Gl~PagVicEi~~~~~~~~~~~~~~dG~mar----~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 165 GKRPVAVISEIVDDGQEVEGRAVRAAPGMLR----GDECVAFARRWGLKVCT 212 (233)
T ss_dssp TCCSBEEEEEBEECCEECTTSSCEESCEECC----HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEEeCCCcccccccccCCCCCcCC----HHHHHHHHHHcCCcEEE
Confidence 344788988866431 465555 88999999999998885
No 263
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=29.66 E-value=66 Score=28.90 Aligned_cols=51 Identities=8% Similarity=-0.011 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEccee--cCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVF--VVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~--~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
+++|++.++ .++.+|.+.|.. +..|...+....+..+-+.|.++|+.+.+-
T Consensus 178 ~~EL~r~~~---~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH 230 (423)
T 4dzi_A 178 VEEVDFVLA---RGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFH 230 (423)
T ss_dssp HHHHHHHHH---TTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHH---cCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEe
Confidence 677777775 357778787642 444555566677899999999999998765
No 264
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=29.38 E-value=78 Score=24.23 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhc-CCCeeEEEEcceecCCCc----ccCChhHHHHHHHHHHHhCCEEE
Q psy11784 75 KYAQAARNIMEAH-RDNIATLICEPVFVVHGA----VVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 75 ~~~~~l~~~i~~~-~~~vaavi~Epv~~~~G~----~~~~~~~l~~l~~l~~~~g~llI 128 (284)
.+.+.++++++.. ..+...|++.|....... ...-..|-+.++++|+++|+.+|
T Consensus 114 ~~~~~l~~~i~~~~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 114 EYRDTLRHLVATTKPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHGGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3455566666522 125556777664322110 11224577888999999997654
No 265
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=28.99 E-value=67 Score=26.35 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=26.3
Q ss_pred EEEcceecCCCccc-------------CChhHHHHHHHHHHHhCCEEEEe
Q psy11784 94 LICEPVFVVHGAVV-------------PPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 94 vi~Epv~~~~G~~~-------------~~~~~l~~l~~l~~~~g~llI~D 130 (284)
+|+=|-....|... ++..+++.|.++++++++.+++=
T Consensus 37 lvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G 86 (262)
T 3ivz_A 37 LVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAG 86 (262)
T ss_dssp EEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEe
Confidence 56666655555432 23478999999999999988763
No 266
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=28.72 E-value=1.5e+02 Score=22.32 Aligned_cols=19 Identities=11% Similarity=0.094 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
..|-+.++++|+++|+.+|
T Consensus 141 ~~~n~~l~~~a~~~~v~~i 159 (204)
T 3p94_A 141 IQLNKWIKEYADKNGLTYV 159 (204)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 4667779999999998776
No 267
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=28.69 E-value=46 Score=22.37 Aligned_cols=26 Identities=19% Similarity=-0.010 Sum_probs=21.4
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
+++....+..+|++++++++.-.-..
T Consensus 38 ~~~~~~~i~~lc~~~~Ip~~~v~sk~ 63 (82)
T 3v7e_A 38 DPILTSSVVSLAEDQGISVSMVESMK 63 (82)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 34789999999999999999866433
No 268
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=28.53 E-value=41 Score=28.18 Aligned_cols=21 Identities=19% Similarity=-0.002 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHhCCEEEEec
Q psy11784 111 GWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DE 131 (284)
+.++++.+.|+++|+.+|+|-
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~ 99 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDF 99 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 567788999999999999984
No 269
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=28.18 E-value=1.1e+02 Score=25.12 Aligned_cols=52 Identities=10% Similarity=0.090 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcc--------cCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAV--------VPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~--------~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++++++...+ +=+|+=|-....|.. ..+..+++.|.++++++++.+++
T Consensus 22 ~~~~~~~i~~a~~g-adlvv~PE~~~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~ 81 (266)
T 2e11_A 22 RDYYGALLEPLAGQ-SDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITG 81 (266)
T ss_dssp HHHHHHHHGGGTTT-CSEEECCTTTTTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHhcCC-CCEEECCCCccccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEE
Confidence 55566666533222 335666765554542 12357899999999999998875
No 270
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.96 E-value=46 Score=28.00 Aligned_cols=24 Identities=4% Similarity=0.098 Sum_probs=21.3
Q ss_pred ChhHHHHHHHHHHHhCCEEEEeccc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~ 133 (284)
+.+.++++.+.|+++|+.+|+| .|
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild-~h 86 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLE-VH 86 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE-EG
T ss_pred CHHHHHHHHHHHHHCCCEEEEE-ec
Confidence 4678999999999999999998 44
No 271
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=27.93 E-value=1.2e+02 Score=25.39 Aligned_cols=52 Identities=0% Similarity=-0.093 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecC--CC-cccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVV--HG-AVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~--~G-~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
+++|++.++ ..++.+|-+-+.... .+ ...+....+..+.++|.++|+.+++-
T Consensus 110 ~~el~~~~~--~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 110 TEELQRCVN--DLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp HHHHHHHHH--TTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHh--cCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 667777775 235666655554321 11 23455677899999999999999874
No 272
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=27.61 E-value=37 Score=28.40 Aligned_cols=49 Identities=14% Similarity=0.113 Sum_probs=34.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
...++++++..++ .++-+ +|-|-....|++.|++..+++++||+.+..-
T Consensus 25 ~~~~~d~Le~~g~-----yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~G 74 (251)
T 1qwg_A 25 PKFVEDYLKVCGD-----YIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPG 74 (251)
T ss_dssp HHHHHHHHHHHGG-----GCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHhhh-----hcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECC
Confidence 5677777773222 23334 4444467789999999999999999976543
No 273
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=27.30 E-value=43 Score=28.52 Aligned_cols=22 Identities=9% Similarity=-0.133 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHhCCEEEEec
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DE 131 (284)
-+.++++.++|+++|+.+|+|=
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 5678899999999999999984
No 274
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=26.76 E-value=44 Score=29.08 Aligned_cols=22 Identities=23% Similarity=0.190 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHhCCEEEEec
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DE 131 (284)
-+.++++.++|+++|+.+|+|=
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 3567889999999999999983
No 275
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=26.76 E-value=38 Score=23.89 Aligned_cols=24 Identities=4% Similarity=-0.098 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHhCCEEEEecccc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
..-.+|++++++||+.++-|.--+
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHHH
Confidence 346899999999999999998654
No 276
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=26.68 E-value=85 Score=24.00 Aligned_cols=9 Identities=11% Similarity=-0.049 Sum_probs=4.2
Q ss_pred HHHHHHHHH
Q psy11784 216 YLYRYTRRM 224 (284)
Q Consensus 216 ~~~~~~~~l 224 (284)
...++.+.+
T Consensus 94 tL~dVi~av 102 (159)
T 3lwf_A 94 TAGDIIRTL 102 (159)
T ss_dssp BHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 344555444
No 277
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=26.65 E-value=1.2e+02 Score=27.10 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=28.7
Q ss_pred CeeEEEEcceecCCCc--c--cCC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIATLICEPVFVVHGA--V--VPP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~--~--~~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++..||+|+++...+. . ... .++++.|..+++++|+.+|+
T Consensus 310 ~~~lIvID~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ 358 (444)
T 2q6t_A 310 QVGLIIIDYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIA 358 (444)
T ss_dssp CCCEEEEECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCEEEEcChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4778999999876432 1 011 36788999999999987775
No 278
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=26.61 E-value=46 Score=27.76 Aligned_cols=21 Identities=10% Similarity=-0.178 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHhCCEEEEec
Q psy11784 111 GWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DE 131 (284)
+.++++.+.|+++|+.+|+|=
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 467788999999999999984
No 279
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=26.36 E-value=26 Score=29.86 Aligned_cols=9 Identities=22% Similarity=0.242 Sum_probs=4.7
Q ss_pred CEEEEeccc
Q psy11784 125 GVVIADEIQ 133 (284)
Q Consensus 125 ~llI~DEv~ 133 (284)
+.+++|=|+
T Consensus 112 ~~vv~DPVm 120 (300)
T 3zs7_A 112 LTFICDPVM 120 (300)
T ss_dssp CEEEECCCC
T ss_pred ceEEEcccc
Confidence 455555544
No 280
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=26.32 E-value=1e+02 Score=25.94 Aligned_cols=41 Identities=12% Similarity=0.159 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
+.++.+.+ .++.++++|| ||.+... -+++.+.|++||+.++
T Consensus 235 dti~~~~~---ag~~~ivi~~----g~si~~~---~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 235 ATIHRAAR---AGLAGIVGEA----GRLLVVD---REAVIAAADDLGLFVL 275 (283)
T ss_dssp HHHHHHHH---TTCCEEEEET----TBCEETT---HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHH---cCCeEEEEcC----CCcEEeC---HHHHHHHHHHcCCEEE
Confidence 45555554 6799999998 4444322 4788899999999887
No 281
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.98 E-value=40 Score=23.55 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHhCCEEEEecccc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
..-.+|+++++++|+.++-|.-.+
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 346899999999999999998654
No 282
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.83 E-value=51 Score=30.21 Aligned_cols=46 Identities=13% Similarity=0.115 Sum_probs=33.4
Q ss_pred CeeEEEEcceecC----CCccc----------CChhHHHHHHHHHHHhCCEEEEeccccc
Q psy11784 90 NIATLICEPVFVV----HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCG 135 (284)
Q Consensus 90 ~vaavi~Epv~~~----~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG 135 (284)
+|-+|.+-||+-. .|.-+ -+.+-+++|.+-|+++|+-||+|=|.--
T Consensus 45 Gvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH 104 (549)
T 4aie_A 45 GIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVVNH 104 (549)
T ss_dssp TCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECccC
Confidence 5788888888532 22111 1345699999999999999999999643
No 283
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.67 E-value=1.7e+02 Score=22.62 Aligned_cols=52 Identities=6% Similarity=-0.029 Sum_probs=27.9
Q ss_pred HHHHHHHHHh-cCCCeeEEEEcceecCC-Ccc---cCC----hhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIMEA-HRDNIATLICEPVFVVH-GAV---VPP----PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~~-~~~~vaavi~Epv~~~~-G~~---~~~----~~~l~~l~~l~~~~g~llI 128 (284)
.+.++++++. ...++..+++.|.+... +.. ... ..|-+.++++|+++++.+|
T Consensus 104 ~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 104 FGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKIQSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHHHHHHHHHHHHHHhcCCeEe
Confidence 3445555542 12445566776543321 111 111 2455678899999998776
No 284
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.56 E-value=56 Score=29.68 Aligned_cols=50 Identities=20% Similarity=0.132 Sum_probs=36.1
Q ss_pred CCeeEEEEcceecC---CCccc----------CChhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 89 DNIATLICEPVFVV---HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 89 ~~vaavi~Epv~~~---~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
-++-+|.+-|++-. .|.-+ -+.+-|++|.+-|+++|+-+|+|=|..-.+.
T Consensus 47 LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~ 109 (488)
T 1wza_A 47 LGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSE 109 (488)
T ss_dssp CCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCT
T ss_pred cCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccC
Confidence 45888999988543 23211 1356799999999999999999999754443
No 285
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=25.20 E-value=1.2e+02 Score=25.92 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=38.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecC----CC--c----ccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVV----HG--A----VVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~----~G--~----~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
+..|.+........+.-+++||..-. +. + ...++.+++.++..+..++++||.|
T Consensus 75 L~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~fvde~dl~~l~~~~~~~~iLLISD 138 (307)
T 3mag_A 75 IRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVDEEYLRSIKKQLHPSKIILISD 138 (307)
T ss_dssp HHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEECCCCHHHHHHHHHHHTTSCEEEEEC
T ss_pred HHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEeccCCHHHHHHHHHhccCCCEEEEEE
Confidence 55566666555567999999995421 11 1 1126778888888888999999999
No 286
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=25.18 E-value=51 Score=27.59 Aligned_cols=22 Identities=5% Similarity=0.003 Sum_probs=20.0
Q ss_pred ChhHHHHHHHHHHHhCCEEEEe
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~D 130 (284)
+.+.++++.+.|+++|+.+|+|
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild 83 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVE 83 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEE
Confidence 4678899999999999999998
No 287
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=25.13 E-value=42 Score=23.69 Aligned_cols=24 Identities=21% Similarity=0.167 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHhCCEEEEecccc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
..-.+|++++++||+.++-|.-.+
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 346899999999999999998654
No 288
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=25.01 E-value=48 Score=27.94 Aligned_cols=25 Identities=24% Similarity=0.138 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHh-CCEEEEecccc
Q psy11784 110 PGWLSLMYDYIHEI-GGVVIADEIQC 134 (284)
Q Consensus 110 ~~~l~~l~~l~~~~-g~llI~DEv~t 134 (284)
.++++.+.+++++. .+++++||+|.
T Consensus 114 ~~~~~~l~~~~~~~~~~vlvlDe~~~ 139 (350)
T 2qen_A 114 REVFRELNDLGEELGEFIVAFDEAQY 139 (350)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEETGGG
T ss_pred HHHHHHHHHHHhccCCEEEEEeCHHH
Confidence 45677777777654 89999999996
No 289
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=24.72 E-value=1.2e+02 Score=26.58 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccC---------------ChhHHHHHHHHHHHhCCEEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVP---------------PPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~---------------~~~~l~~l~~l~~~~g~llI~ 129 (284)
+.++++++ ..++..||||+++........ -..+++.|..+++++++.+|+
T Consensus 142 ~~l~~l~~--~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~ 206 (366)
T 1xp8_A 142 EIMELLVR--SGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIF 206 (366)
T ss_dssp HHHHHHHT--TTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHh--cCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34444443 234778999998765320000 124677777778999987766
No 290
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=24.51 E-value=98 Score=23.01 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=6.0
Q ss_pred HHHHHHHHHCCcEE
Q psy11784 218 YRYTRRMKEAKIIV 231 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~ 231 (284)
.++.+.|.+.|++.
T Consensus 46 ~kil~~L~~aGlv~ 59 (143)
T 3t8r_A 46 EQLVGPLRNAGLIR 59 (143)
T ss_dssp HHHHHHHHHTTSEE
T ss_pred HHHHHHHHHCCEEE
Confidence 33444444444443
No 291
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=24.49 E-value=49 Score=27.93 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHhCCEEEEec
Q psy11784 111 GWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DE 131 (284)
+.++++.+.|+++|+.+|+|=
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~ 100 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDW 100 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 567888999999999999984
No 292
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=24.27 E-value=1.4e+02 Score=24.57 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.+++|++.++ ..++.+|-+-+... | ..+....++.+.++|.++|..+++
T Consensus 105 ~~~el~~~~~--~~g~~gi~~~~~~~--~-~~~~~~~~~~~~~~a~~~~lpv~i 153 (307)
T 2f6k_A 105 AVKTVQQALD--QDGALGVTVPTNSR--G-LYFGSPVLERVYQELDARQAIVAL 153 (307)
T ss_dssp HHHHHHHHHH--TSCCSEEEEESEET--T-EETTCGGGHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHh--ccCCcEEEEeccCC--C-CCCCcHhHHHHHHHHHHcCCeEEE
Confidence 3667777775 23566776655432 2 234556788999999999999885
No 293
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=24.06 E-value=73 Score=27.71 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHhCCEEEEecccc---------cCccccCccccccccCCCC-cEEEecccccCC
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEIQC---------GMGRSGSHFWAFQTQGAVP-DIITVGKPMGNG 165 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv~t---------G~gr~G~~~~a~~~~g~~p-Div~~sK~l~~G 165 (284)
.++++.+.+.|+++|+.+|==++.. .+|..-+ .-.....+.+| |.+++.|.+|.|
T Consensus 120 ~~i~~Gi~~~~~~~gv~lvGGdt~~~~~~~i~~t~vG~v~~-~~~~~~~~a~~GD~Iivtg~lG~~ 184 (345)
T 2yyd_A 120 REVIRGALDKLREAKTVLLGGHTIDDKEPKFGLSVAGICPE-GKYITQSGAQVGQLLILTKPIGTG 184 (345)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEECSSCEEEEEEEEECGG-GCCCCSSCCCTTCEEEECSCBCHH
T ss_pred HHHHHHHHHHHHHcCCEEEeeEcccCCCceEEEEEEEEEcC-CceecCCCCCCCCEEEEECCCcHH
Confidence 4577888999999999998544321 1222111 00112234554 788888988754
No 294
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=23.64 E-value=64 Score=29.12 Aligned_cols=49 Identities=24% Similarity=0.299 Sum_probs=35.7
Q ss_pred CeeEEEEcceecC---CCccc----------CChhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 90 NIATLICEPVFVV---HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 90 ~vaavi~Epv~~~---~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
++-+|.+-|++-. .|.-+ -+.+-++++.+-|+++|+-+|+|=|..-.+.
T Consensus 63 Gv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~ 124 (475)
T 2z1k_A 63 GVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGR 124 (475)
T ss_dssp TCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 5888988888432 23211 1357799999999999999999999764443
No 295
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=23.60 E-value=55 Score=27.93 Aligned_cols=20 Identities=0% Similarity=-0.119 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHhCCEEEEe
Q psy11784 111 GWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~D 130 (284)
+.++++.++|+++|+.+|+|
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~ 110 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFT 110 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEE
Confidence 46889999999999999986
No 296
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=23.46 E-value=1.6e+02 Score=23.13 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC-CcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH-GAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~-G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.+.+++.++..+ +..+++|+++... +....-..++..+.++++++|+.+|+
T Consensus 117 ~~~i~~~~~~~~--~~~vviD~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~vi~ 168 (247)
T 2dr3_A 117 IEVLRQAIRDIN--AKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIF 168 (247)
T ss_dssp HHHHHHHHHHHT--CCEEEEETSGGGTTTCGGGHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhC--CCEEEECCchHhhcCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 345555555333 4568999887643 22111256788889999999865554
No 297
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.38 E-value=84 Score=28.07 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=35.0
Q ss_pred CCeeEEEEcceecC--CCcc----------cCChhHHHHHHHHHHHhCCEEEEecccccCc
Q psy11784 89 DNIATLICEPVFVV--HGAV----------VPPPGWLSLMYDYIHEIGGVVIADEIQCGMG 137 (284)
Q Consensus 89 ~~vaavi~Epv~~~--~G~~----------~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 137 (284)
-++-+|.+-|++-. .|.- .-+.+-+++|.+-|+++|+-+|+|=|..-.+
T Consensus 48 LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 48 LKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp TTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred cCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 35778888887432 1210 1135679999999999999999999976554
No 298
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=23.38 E-value=82 Score=28.34 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=28.7
Q ss_pred CeeEEEEcceecCCCccc---CC----hhHHHHHHHHHHHhCCEEEEe
Q psy11784 90 NIATLICEPVFVVHGAVV---PP----PGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~---~~----~~~l~~l~~l~~~~g~llI~D 130 (284)
++..||+|.++...+... -. .++++.|+.+++++|+.+|+=
T Consensus 313 ~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~ 360 (454)
T 2r6a_A 313 GLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIAL 360 (454)
T ss_dssp CCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 577899999887643210 11 467788999999999877663
No 299
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=23.14 E-value=56 Score=29.15 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHHhCCEEEEec
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DE 131 (284)
.-++|+++.+.|+++|+.+|+|=
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35889999999999999999994
No 300
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=23.11 E-value=57 Score=28.39 Aligned_cols=23 Identities=17% Similarity=-0.067 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHHhCCEEEEeccc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv~ 133 (284)
+.++++.+.|+++|+.+|+|--.
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 45778899999999999998655
No 301
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=22.92 E-value=79 Score=23.96 Aligned_cols=19 Identities=5% Similarity=0.118 Sum_probs=15.2
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
..+-+.++++|+++|+.+|
T Consensus 119 ~~~n~~~~~~a~~~~v~~i 137 (190)
T 1ivn_A 119 EAFSAIYPKLAKEFDVPLL 137 (190)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCeEE
Confidence 4566778999999998766
No 302
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=22.74 E-value=82 Score=26.42 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=27.2
Q ss_pred cccCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 105 AVVPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 105 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
...|++.-+.+|.+.++++++-.|+-|-+.
T Consensus 204 ~~eps~~~l~~l~~~ik~~~v~~if~e~~~ 233 (284)
T 2prs_A 204 EIQPGAQRLHEIRTQLVEQKATCVFAEPQF 233 (284)
T ss_dssp TSCCCHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 457899999999999999999999999875
No 303
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=22.68 E-value=24 Score=28.20 Aligned_cols=17 Identities=41% Similarity=0.452 Sum_probs=13.8
Q ss_pred HHHhCCEEEEecccccC
Q psy11784 120 IHEIGGVVIADEIQCGM 136 (284)
Q Consensus 120 ~~~~g~llI~DEv~tG~ 136 (284)
.+..+.+||+||+|.=+
T Consensus 84 ~~~~~~vliIDEAq~l~ 100 (199)
T 2r2a_A 84 PENIGSIVIVDEAQDVW 100 (199)
T ss_dssp GGGTTCEEEETTGGGTS
T ss_pred cccCceEEEEEChhhhc
Confidence 45669999999999843
No 304
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=22.68 E-value=60 Score=27.36 Aligned_cols=22 Identities=18% Similarity=0.142 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHhCCEEEEecc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv 132 (284)
++++++.+.|+++|+.+|+|=-
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h 93 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPH 93 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEecc
Confidence 4588899999999999999943
No 305
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=22.66 E-value=1.2e+02 Score=26.14 Aligned_cols=44 Identities=9% Similarity=0.036 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.++.+++ .++.+||+|. .|.| . . |+++++.|.+++.+.|++++.
T Consensus 231 ~l~~~~~---~g~~GiVle~-~G~G-n-~-p~~~~~~l~~a~~~~gi~VV~ 274 (331)
T 1agx_A 231 AYQAFAK---AGVKAIIHAG-TGNG-S-M-ANYLVPEVRKLHDEQGLQIVR 274 (331)
T ss_dssp HHHHHHT---TTCSEEEEEE-BTTT-B-C-CTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHh---CCCCEEEEee-ECCC-C-C-CHHHHHHHHHHHHcCCCEEEE
Confidence 4444454 4588999995 3332 2 2 378999999987577887653
No 306
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=22.60 E-value=1.1e+02 Score=25.97 Aligned_cols=52 Identities=12% Similarity=0.242 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC-------Cccc----CChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH-------GAVV----PPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~-------G~~~----~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++.+++ ..++..||+|+++..- |... .-..+++.|..+++++|+.+|+
T Consensus 192 l~~l~~~~~~-~~~~~lvVIDsl~~l~~~~~~~~~~~~~r~~~~~~~~~~L~~la~~~~~~vi~ 254 (322)
T 2i1q_A 192 AEKIEDLIQE-GNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLV 254 (322)
T ss_dssp HHTHHHHHHT-TCEEEEEEEECSSHHHHHHCCCTTSHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhh-ccCccEEEEECcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 3445555542 1458899999986531 1111 1146788899999999987776
No 307
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=22.51 E-value=1.5e+02 Score=21.47 Aligned_cols=46 Identities=13% Similarity=0.074 Sum_probs=27.9
Q ss_pred HHHHHHHHHhcCC--CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIMEAHRD--NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~~~~~--~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
.++|.+.+++.++ .-+.||++.-.-. +..-|.+|.++|++||+.+|
T Consensus 31 ~~~L~~ki~~aP~FF~~aPVVlDl~~l~------~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 31 RQALEDKIAQAPAFLKHAPVVINVSGLE------SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp HHHHHHHHHHSHHHHTTCEEEEEEEECC------SSCCHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHhChHhhCCCcEEEEccccC------ChHHHHHHHHHHHHcCCEEE
Confidence 4566666663322 2345666642111 11238999999999999886
No 308
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=22.20 E-value=2.6e+02 Score=24.78 Aligned_cols=43 Identities=7% Similarity=0.274 Sum_probs=28.1
Q ss_pred CeeEEEEcceecCCCcccCC-----------hhHHHHHHHHHHHhCCEEE-Eecc
Q psy11784 90 NIATLICEPVFVVHGAVVPP-----------PGWLSLMYDYIHEIGGVVI-ADEI 132 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~-----------~~~l~~l~~l~~~~g~llI-~DEv 132 (284)
++..||+|.+...-...... ..+++.|.++++++|+.+| +-.+
T Consensus 273 ~~~llVIDs~t~~~~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIlv~Hv 327 (400)
T 3lda_A 273 RFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQV 327 (400)
T ss_dssp CEEEEEEETGGGGCC------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred CCceEEecchhhhCchhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 57889999886642111100 5678889999999987654 4444
No 309
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=22.20 E-value=1.4e+02 Score=19.45 Aligned_cols=50 Identities=6% Similarity=-0.203 Sum_probs=31.3
Q ss_pred ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 213 ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 213 ~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+...+..+...|...|+-.... ..+..-|+...-..+.++.+.+++.|.+
T Consensus 19 ~~~~A~~l~~~L~~~G~~a~i~-~~~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 19 GAEQAETVRAQLAFEGFDSKIT-TNNGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE-ECSSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCeEEE-eCCcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 4466788888888877643321 1234445555334577888888887765
No 310
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=22.12 E-value=1.8e+02 Score=24.56 Aligned_cols=48 Identities=4% Similarity=-0.086 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+++|++.++ ..++.+|-+-|... | ..+....+..+.++|.++|+.+++
T Consensus 126 ~~el~~~~~--~~g~~Gv~l~~~~~--~-~~l~d~~~~~~~~~~~e~~lpv~i 173 (336)
T 2wm1_A 126 VKEMERCVK--ELGFPGVQIGTHVN--E-WDLNAQELFPVYAAAERLKCSLFV 173 (336)
T ss_dssp HHHHHHHHH--TSCCSEEEEESEET--T-EETTCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHH--ccCCeEEEECCcCC--C-CCCCCccHHHHHHHHHHcCCEEEE
Confidence 567777775 23566776655432 2 345566789999999999999886
No 311
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=22.03 E-value=58 Score=28.42 Aligned_cols=24 Identities=4% Similarity=-0.068 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
..+.++++.+.|+++|+.+|+|=-
T Consensus 85 ~l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 85 DIDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 457788999999999999999743
No 312
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=21.96 E-value=57 Score=29.66 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=35.3
Q ss_pred CeeEEEEcceecC---CCccc----------CChhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 90 NIATLICEPVFVV---HGAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 90 ~vaavi~Epv~~~---~G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
++-+|.+-|++-. .|.-+ -+.+-|++|.+-|+++|+-+|+|=|..-.+.
T Consensus 69 Gv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~ 130 (488)
T 2wc7_A 69 GINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSR 130 (488)
T ss_dssp TCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCC
Confidence 5888999998432 23211 1246699999999999999999999764443
No 313
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=21.75 E-value=62 Score=28.85 Aligned_cols=24 Identities=13% Similarity=0.046 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
.-++|+++.+.|+++|+.+|+|=-
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH 135 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLH 135 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECC
Confidence 346889999999999999999944
No 314
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=21.51 E-value=1.8e+02 Score=22.72 Aligned_cols=19 Identities=5% Similarity=0.100 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
..|-+.++++|+++|+.+|
T Consensus 160 ~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 160 SDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 6789999999999998765
No 315
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=21.49 E-value=70 Score=31.32 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=35.8
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG 140 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G 140 (284)
+--.-+||-.|......-....++++.+-|+++|+-+|+|=|+.-++..+
T Consensus 359 ~~y~a~~~~ygt~~d~~~~~~efk~LV~~aH~~GIkVIlDvV~NHts~~h 408 (884)
T 4aio_A 359 VLWGVPKGSYASDPDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSG 408 (884)
T ss_dssp EEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEECCSBCSCCS
T ss_pred ccccCCCcccccCccccchHHHHHHHHHHHHhcCCceeeeeccccccCCC
Confidence 44566888877643322224568999999999999999999976554444
No 316
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=21.45 E-value=64 Score=27.90 Aligned_cols=20 Identities=15% Similarity=0.105 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHhCCEEEEe
Q psy11784 111 GWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~D 130 (284)
+.|+.+.++|+++|+.+|+|
T Consensus 85 ~~ld~~i~~a~~~Gi~vil~ 104 (373)
T 1rh9_A 85 QGLDFVISEAKKYGIHLIMS 104 (373)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 45788889999999999997
No 317
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=21.38 E-value=1.5e+02 Score=22.09 Aligned_cols=19 Identities=5% Similarity=0.039 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
+.|-+.++++|+++|+.++
T Consensus 123 ~~~~~~~~~~a~~~~~~~v 141 (185)
T 3hp4_A 123 KMFTSSFTQISEDTNAHLM 141 (185)
T ss_dssp HHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 5778889999999998866
No 318
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=21.32 E-value=45 Score=30.93 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCCCee-------EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc
Q psy11784 77 AQAARNIMEAHRDNIA-------TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG 135 (284)
Q Consensus 77 ~~~l~~~i~~~~~~va-------avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG 135 (284)
++.|++.|+....+++ |.+-|.+.--+|. |..-+..++.++++++|++++=|+..||
T Consensus 261 ~~~l~~ai~~~~~eispS~~YA~AAl~aG~~fIN~s--P~~t~~P~~~elae~~gvpI~GDD~KSG 324 (533)
T 1p1j_A 261 MENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGS--PQNTFVPGLVQLAEHEGTFIAGDDLKSG 324 (533)
T ss_dssp HHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECS--CSCCCCHHHHHHHHHHTCCEEESSBCCS
T ss_pred HHHHHHHHhcCCccCChHHHHHHHHHhcCCceeecC--CcccCCHHHHHHHHHhCCceeccccccC
Confidence 6778888874433322 3334443222222 2222567899999999999999998874
No 319
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=21.30 E-value=1.5e+02 Score=24.62 Aligned_cols=38 Identities=8% Similarity=0.163 Sum_probs=26.4
Q ss_pred eEEEEcceecCCCccc-----------CC--hhHHHHHHHHHHHhCCEEEE
Q psy11784 92 ATLICEPVFVVHGAVV-----------PP--PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 92 aavi~Epv~~~~G~~~-----------~~--~~~l~~l~~l~~~~g~llI~ 129 (284)
+=+|+=|-....|... ++ ..+++.|.++++++++.+++
T Consensus 46 adlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 96 (291)
T 1f89_A 46 TKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVG 96 (291)
T ss_dssp EEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEEC
T ss_pred CeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEe
Confidence 4466767655545311 12 56899999999999998874
No 320
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=21.18 E-value=98 Score=26.05 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=25.6
Q ss_pred cccCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 105 AVVPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 105 ~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
...|++.-+.+|.+.++++++-.||-|-+.
T Consensus 209 ~~eps~~~l~~l~~~ik~~~v~~if~e~~~ 238 (286)
T 3gi1_A 209 EQEPSPRQLKEIQDFVKEYNVKTIFAEDNV 238 (286)
T ss_dssp ---CCHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 446899999999999999999999999875
No 321
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=21.14 E-value=66 Score=27.59 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHhCCEEEEeccc
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv~ 133 (284)
-++++++.+.|+++|+.+|+|=-.
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEecCC
Confidence 467889999999999999999554
No 322
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=21.05 E-value=70 Score=23.23 Aligned_cols=25 Identities=12% Similarity=-0.136 Sum_probs=20.1
Q ss_pred CChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 108 PPPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 108 ~~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
.|.++...+..+|++++++++.-.-
T Consensus 47 ~~~~~~~~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 47 WPADVISHIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp SCTTHHHHHHHHHHHTCCCEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCcEEEECC
Confidence 3556788999999999999976543
No 323
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=21.01 E-value=2.3e+02 Score=24.65 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhc-CCCeeEEEEcceecCC-----Ccc-cCChhHHHHHHHHHHHhCCEEE
Q psy11784 75 KYAQAARNIMEAH-RDNIATLICEPVFVVH-----GAV-VPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 75 ~~~~~l~~~i~~~-~~~vaavi~Epv~~~~-----G~~-~~~~~~l~~l~~l~~~~g~llI 128 (284)
.+.+.++++++.. ..+...|++.|..... |.+ ..-..|-+.++++|+++++.+|
T Consensus 253 ~~~~~l~~ii~~lr~~~a~vilvtP~~~~~~~~~~~~~~~~~~~~~~~i~~lA~~~~v~~i 313 (375)
T 2o14_A 253 EFKEVMRDMIRQVKAKGADVILSTPQGRATDFTSEGIHSSVNRWYRASILALAEEEKTYLI 313 (375)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEECCCCCTTCBCTTSCBCCTTSTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCcccccCcccchhHHHHHHHHHHHHHHHHcCCeEE
Confidence 3445566666521 2245566777764321 111 1234677888999999998765
No 324
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=20.58 E-value=95 Score=26.56 Aligned_cols=35 Identities=14% Similarity=-0.094 Sum_probs=29.2
Q ss_pred ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 100 FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 100 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
.+..-...|++.-+.+|.+.++++++-.|+-|-+.
T Consensus 222 ~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~ 256 (313)
T 1toa_A 222 QGVSTASEASAHDMQELAAFIAQRKLPAIFIESSI 256 (313)
T ss_dssp ECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTS
T ss_pred eccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 33333457899999999999999999999999886
No 325
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=20.35 E-value=1.3e+02 Score=25.74 Aligned_cols=54 Identities=19% Similarity=0.256 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHhCCEEEEeccccc--------CccccCccccccccCCCC-cEEEecccccC
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEIQCG--------MGRSGSHFWAFQTQGAVP-DIITVGKPMGN 164 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv~tG--------~gr~G~~~~a~~~~g~~p-Div~~sK~l~~ 164 (284)
.++++.+.+.|+++|+.+|==++..| +|..-+ .-.....+.+| |.+++.|.+|.
T Consensus 98 ~~i~~Gi~~~~~~~g~~lvGGdt~~~~~~i~~t~iG~v~~-~~~~~~~~a~~GD~ii~tg~~G~ 160 (319)
T 3mcq_A 98 SKFAAGFFACAAQFDIALIGGDTTRGPLTISVQIMGETPP-GASLLRSTARADDDIWVSGPLGD 160 (319)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEESSCEEEEEEEEEECT-TCCCCSSCCCTTEEEEECSCCSH
T ss_pred HHHHHHHHHHHHHcCCeEEeeEcCCCCeEEEEEEEEeeCC-CcccccCCCCCCCEEEEECCccH
Confidence 46778889999999999986554321 221111 00112234554 78888888874
No 326
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=20.33 E-value=71 Score=27.24 Aligned_cols=23 Identities=4% Similarity=0.141 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHhCCEEEEeccc
Q psy11784 111 GWLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~DEv~ 133 (284)
++++++.+.|+++|+.+|+|=-+
T Consensus 69 ~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 69 SYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEecC
Confidence 46788899999999999999544
No 327
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=20.23 E-value=2.2e+02 Score=23.37 Aligned_cols=63 Identities=8% Similarity=0.126 Sum_probs=43.7
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhC--CEEEEecccccC-ccccCccccccccCCCCcE-EEec
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG--GVVIADEIQCGM-GRSGSHFWAFQTQGAVPDI-ITVG 159 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDi-v~~s 159 (284)
+-+|||-++|.|-..+ ..+.+..+.+...+.+ ..++.=++=+|+ +-||. . ...-+.+|. +||+
T Consensus 133 ~dliIDaLfG~Gl~~~-l~~~~~~~I~~iN~~~~~~~vvAvDiPSGl~~dtG~-~---~g~av~Ad~TvTf~ 199 (246)
T 1jzt_A 133 TLCIVDAIFGFSFKPP-MREPFKGIVEELCKVQNIIPIVSVDVPTGWDVDKGP-I---SQPSINPAVLVSLT 199 (246)
T ss_dssp EEEEEEESCCTTCCSS-CCTTHHHHHHHHHHHTTTSCEEEESSCTTSBTTTBC-C---SSSCCCCSEEEEES
T ss_pred CcEEEEecccCCCCCC-CcHHHHHHHHHHHhcCCCCCEEEEECCCCccCCCCC-c---CCCeEcCCEEEECc
Confidence 4799999999865444 4556677777888888 888888899997 33453 1 112477885 5665
No 328
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=20.21 E-value=69 Score=28.68 Aligned_cols=20 Identities=10% Similarity=-0.054 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHhCCEEEEe
Q psy11784 111 GWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~D 130 (284)
+.|+.+.++|+++|+.+|+|
T Consensus 111 ~~lD~~l~~a~~~Gi~vil~ 130 (440)
T 1uuq_A 111 QGLDYLLVELAKRDMTVVLY 130 (440)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 45668999999999999997
No 329
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=20.17 E-value=72 Score=27.71 Aligned_cols=56 Identities=7% Similarity=0.004 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCC-eeEEEE-cceec--CCCcccCC---hhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 77 AQAARNIMEAHRDN-IATLIC-EPVFV--VHGAVVPP---PGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~-vaavi~-Epv~~--~~G~~~~~---~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
..++.+.++..+-+ |..-|- +.++. ..| ... -++++++.+.|+++|+.+|+|=-+.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g--~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~ 107 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGG--NLDSTSISKYDQLVQGCLSLGAYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTC--CCCHHHHHHHHHHHHHHHHTTCEEEEEECST
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCC--ccCHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 35556666655545 444332 22222 122 223 4567888999999999999995443
Done!