RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy11784
(284 letters)
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 213 bits (544), Expect = 6e-63
Identities = 110/321 (34%), Positives = 162/321 (50%), Gaps = 58/321 (18%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEK--KPWVHVIPFP 58
SEAN LAL+LARA+TG+++ +V+D AYHGT L+D+SP F K V V P
Sbjct: 690 SEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVP 749
Query: 59 DTYRGEFSADDPQAAQKYAQA-ARNI--MEAHRDNIATLICEPVFVVHGAVVPPPGWLSL 115
D+YRG D + +++A++ A I M A A I E + V G + P G+L
Sbjct: 750 DSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLRE 809
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSR 175
+Y + GGV IADE+Q G GR GSH+WAF+TQG VPDI+T+GKP+GNG P+GAV+T+R
Sbjct: 810 VYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTR 869
Query: 176 KIAES------------------------LNCLDDNRPS------GKYL----------- 194
+IA+S L+ ++D G YL
Sbjct: 870 EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRF 929
Query: 195 -----VRPLGINLHIFWCLIL----LSITYYLYRYTR-RMKEAKIIVANEGEYGNVLLFL 244
VR +G+ L I L+ + + RY + +E I++ EG + NVL
Sbjct: 930 DIIGDVRGMGLFLGIE--LVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIR 987
Query: 245 PAMCLTTENVLFIVSTLNRIF 265
P + + + ++ L+ +
Sbjct: 988 PPLIFSRADADHLLEVLDDVL 1008
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 195 bits (497), Expect = 1e-56
Identities = 86/190 (45%), Positives = 115/190 (60%), Gaps = 14/190 (7%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHG------TVNLLLDISPRAFMLSSEKKPWVHV 54
SEANDLA++LA A +GR+++V V AYHG V+ + +P+A + WVH
Sbjct: 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQAL---ETRPDWVHP 707
Query: 55 IPFPDTYRGEFSADDPQAAQKYAQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPG 111
+ P+TYRG F D +A Y + +E A +A ICEPV+ G + PPG
Sbjct: 708 VESPNTYRGRFRGAD--SAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPG 765
Query: 112 WLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAV 171
+L +Y + GGV IADE+Q G GR G +FW F+ QG VPDIIT+ K MGNG P+GAV
Sbjct: 766 YLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAV 825
Query: 172 ITSRKIAESL 181
IT R+IAE+L
Sbjct: 826 ITRREIAEAL 835
Score = 38.1 bits (89), Expect = 0.004
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 223 RMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266
R+ E +I+ G++ N+L P +CL E+ F V L+R+ T
Sbjct: 926 RLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLT 969
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 184 bits (469), Expect = 3e-55
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKP---WVHVIPF 57
+EA + A+++ARAYTGR ++ D A+HG L ++ + P V+ +P+
Sbjct: 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPY 186
Query: 58 PDTYRGEFSADDPQAAQKYAQAARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLS 114
P+ YR F + + + + +A +I EP+ G +VPP G+L
Sbjct: 187 PNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLK 246
Query: 115 LMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITS 174
+ E G ++IADE+Q G GR+G +AF+ G PDI+T+ K +G G+P+ AV+
Sbjct: 247 ALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGR 305
Query: 175 RKI 177
+I
Sbjct: 306 AEI 308
Score = 30.6 bits (70), Expect = 0.85
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 222 RRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266
R E +++ G +GNVL LP + ++ E + + L
Sbjct: 400 ARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALK 444
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 178 bits (454), Expect = 2e-53
Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+EA + AL+LARAYTGR+ I+ + AYHG L ++ V+ P
Sbjct: 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYP 165
Query: 61 YRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYI 120
YR A+ +A +E H + +A +I EP+ G +VPPPG+L + +
Sbjct: 166 YRYRPPAE----LADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELC 221
Query: 121 HEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIA-- 178
+ G ++IADE+Q G GR+G +AF+ G PDI+T+GK +G G+P+GAV+ +I
Sbjct: 222 RKHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDA 280
Query: 179 -----------------------------ESLNCLDDNRPSGKYL--------------- 194
E L++ G+YL
Sbjct: 281 FPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVG 340
Query: 195 -VRPLGINLHIFWCLILLSITYYL---YRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLT 250
VR G+ + I + + + E +++ G GNV+ LP + +T
Sbjct: 341 DVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIIT 398
Query: 251 TENVLFIVSTLNRIF 265
E + + L+
Sbjct: 399 EEEIDEGLDALDEAL 413
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 131 bits (332), Expect = 2e-35
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKK-----PWVHVI 55
S+AND ++ ARAYTGR I+ AYHG+ L +S L+ +K P I
Sbjct: 113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMS--GISLNMRRKYGPLLPGFVHI 170
Query: 56 PFPDTYRGEFSADDPQAAQKYAQAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWL 113
PFPD YRG + D ++Y + + E + D +A ++ E + G + P PG+
Sbjct: 171 PFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYF 230
Query: 114 SLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVIT 173
+Y + E G + D+IQ G+GR+G + + PD+++ GK + GMP+ A++
Sbjct: 231 EALYKFCREHGILFAVDDIQQGLGRTGK-WSSISHFNITPDLMSFGKSLAGGMPMSAIVG 289
Query: 174 SRKIAESL 181
++I ESL
Sbjct: 290 RKEIMESL 297
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 128 bits (325), Expect = 3e-35
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISP-----RAFMLSSEKK 49
SEAN+ A++LAR Y TG+ I+ +HG L ++ + F S
Sbjct: 86 SEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGALSVTGSSGYKKGFGPSL--- 142
Query: 50 PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPP 109
P V+ +P+PD E A R I H DNIA +I EP+ G V PP
Sbjct: 143 PGVYFLPYPDLEAAEEELACADEAL------RLIKAVHDDNIAAVIVEPIQGEGGVVPPP 196
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIG 169
PG+L+ + + + G ++IADE+Q G GR+G +A + G PDI+T+ K + G+P+
Sbjct: 197 PGFLAGLREICKKHGVLLIADEVQTGFGRTGK-LFACEHYGVTPDIMTLAKALTGGLPLS 255
Query: 170 AVITSRKIAESLN 182
AV+ + +I ++ +
Sbjct: 256 AVLATAEIMQAFH 268
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 126 bits (318), Expect = 2e-33
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHG-TVNLLLDISPRAFMLSSEKK--PW 51
SEA + AL++A Y R+ + YHG T+ + P A + P
Sbjct: 115 SEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPE 174
Query: 52 VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHR-DNIATLICEPVFV-VHGAVVPP 109
V +P P YR F + + + A ++ H + IA I EPV G +VPP
Sbjct: 175 VLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPP 234
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPI 168
PG+L + + + G ++IADE+ G GR+G F A + G VPDI+ + K + G +P+
Sbjct: 235 PGYLKRVREICDKYGILLIADEVATGFGRTGKMF-ACEHAGIVPDILCLAKGLTGGYLPL 293
Query: 169 GAVITSRKIAESL 181
AV+TS +I E+
Sbjct: 294 SAVLTSDRIYEAF 306
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 122 bits (308), Expect = 4e-32
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 5/185 (2%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSE--KKPWVHVIPFP 58
S+AND A++ ARAYT R+ I+ +Y+G+ + ++ F + + + VH IP+P
Sbjct: 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYP 170
Query: 59 DTYRGEFSADDPQAAQKYAQAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLM 116
D YR F + + + + E + + +A L EP+ G +VPP + +
Sbjct: 171 DCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKL 230
Query: 117 YDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRK 176
+ E G +++ DE+Q G+GR+G F A + G PDIIT+GKP+G G+PI A I +
Sbjct: 231 KKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDIITLGKPLGGGLPISATIGRAE 289
Query: 177 IAESL 181
I +SL
Sbjct: 290 IMDSL 294
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 118 bits (299), Expect = 7e-31
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 42/195 (21%)
Query: 1 SEANDLALQLARAYTG---RQNIVVVDAAYHG-TVNLLLDISPRAFMLSSEKK------- 49
+EAN+ AL+LAR YTG + I+ + ++HG T L +S + + K
Sbjct: 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRT---LGALS-----ATGQPKYRKGFGP 161
Query: 50 --PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVV 107
P +PF +D +A + A ++ A +I EP+ G +
Sbjct: 162 LLPGFRHVPF----------NDIEALEA----------AIDEDTAAVIVEPIQGEGGVIP 201
Query: 108 PPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMP 167
PP +L + + E G ++I DE+Q G+GR+G +A++ G PDI+T+ K +G G P
Sbjct: 202 APPEFLKALRELCDEHGALLILDEVQTGLGRTG-KLFAYEHYGVEPDILTLAKALGGGFP 260
Query: 168 IGAVITSRKIAESLN 182
IGA++ + +IA +
Sbjct: 261 IGAMLATEEIASAFT 275
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 112 bits (283), Expect = 1e-28
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEK--------KPWV 52
+EA + AL+LA+ T R I+ +HG L ++ S K V
Sbjct: 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTT-----SKSKYRKYYQPLLGSV 167
Query: 53 HVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRD--NIATLICEPVFVVHGAVVPPP 110
+ P+P R D + + ++ + +A +I EPV G +VPP
Sbjct: 168 YQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPK 227
Query: 111 GWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGA 170
+L + + G ++I DE+Q G GR+G F A QT G VPDI+T+ K + +G+P+ A
Sbjct: 228 SFLKKLREICDRHGILLIFDEVQTGFGRTGEWF-AAQTFGVVPDIMTIAKGIASGLPLSA 286
Query: 171 VITSRKIAESLNC 183
V+ S+++ E
Sbjct: 287 VVASKELMEQWPL 299
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 110 bits (276), Expect = 1e-27
Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVI-PF-P 58
+EA + A+++AR+YTGRQ +VV D AYHG NL + L+++ P+ PF P
Sbjct: 127 AEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTM-------ALTAKSMPYKSGFGPFAP 179
Query: 59 DTYRGEFS---ADDPQAAQKYAQAARNIMEAHR-----DNIATLICEPVFVVHGAVVPPP 110
+ YR S D A +AA + DN+A +I EP+ G +VP
Sbjct: 180 EVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAE 239
Query: 111 GWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGA 170
G+L + ++ E G V IADE+Q G R+G+ F A + +G VPD+IT K + G+P+ A
Sbjct: 240 GFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLITTAKGIAGGLPLSA 298
Query: 171 VITSR 175
V T R
Sbjct: 299 V-TGR 302
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 103 bits (259), Expect = 2e-25
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 36/192 (18%)
Query: 1 SEANDLALQLARAYTG-----RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW---- 51
+EAN+ AL+LAR YTG ++ I+ + ++HG L + + +K +
Sbjct: 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQ----PKYQKGFEPLV 149
Query: 52 --VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPP 109
P+ +D ++ +K D A +I EP+ G
Sbjct: 150 PGFSYAPY----------NDIESLKKAID----------DETAAVIVEPIQGEGGVNPAS 189
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIG 169
+L + + + ++I DE+Q G+GR+G F+A++ G PDIIT+ K +G G+PIG
Sbjct: 190 AEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFAYEHYGIEPDIITLAKGLGGGVPIG 248
Query: 170 AVITSRKIAESL 181
A + ++AE+
Sbjct: 249 ATLAKEEVAEAF 260
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 103 bits (257), Expect = 4e-25
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW---VHVIPF 57
+EA + A+++AR+YTGR +V D +HG N+ + ++ + S P+ V+ P
Sbjct: 104 AEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPL 163
Query: 58 PDTYRGEFSADDPQAAQKYAQAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWLSL 115
P YR D + AAR I +N+A L+ EPV G +VP G++
Sbjct: 164 PYPYRD-GLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPA 222
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSR 175
+ D+ E G V IADE+Q G R+G+ F A + +G PD+IT K + +G+P+ V
Sbjct: 223 LLDWCREHGIVFIADEVQTGFARTGAMF-ACEHEGPEPDLITTAKSLADGLPLSGVTGR- 280
Query: 176 KIAESLNCLDDNRPSGKYLVRPLGI 200
AE ++ G Y PL
Sbjct: 281 --AEIMDAPAPGGLGGTYAGNPLAC 303
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 97.9 bits (245), Expect = 2e-23
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 2 EANDLALQLARAYTGRQN-----IVVVDAAYHGTVNLLLDISPRAF-MLSSEKKPWVH-- 53
EAN+ A++LAR Y ++ I+ + ++HG R LS+ +P
Sbjct: 107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHG----------RTLATLSATGQPKYQEG 156
Query: 54 VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWL 113
P + + +D +A + A D A ++ EP+ G +L
Sbjct: 157 FEPLVEGFI-YVPFNDIEA----------LKAAITDKTAAVMLEPIQGEGGVNPADKEYL 205
Query: 114 SLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVIT 173
+ + E G ++I DE+Q GMGR+G +A+Q G PDI+T+ K +G G+PIGAV+
Sbjct: 206 QALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGIEPDIMTLAKGLGGGVPIGAVLA 264
Query: 174 SRKIAESL 181
K+A+
Sbjct: 265 KEKVADVF 272
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 97.0 bits (242), Expect = 6e-23
Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 19/191 (9%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHG--TVNLLLDISP---RAFMLSSEKK 49
S+A D A++ R Y ++ + ++ YHG +V L P R F L
Sbjct: 117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLP---L 173
Query: 50 PWVHVIPFPDTYRGEFSADDPQA--AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVV 107
PW H IP P YR DDPQA A A + E DN+A CEP+ G +V
Sbjct: 174 PWQHKIPSPYPYRNPV-GDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIV 232
Query: 108 PPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-M 166
PP GWL M + E+G + +ADE+ G GR+G F A + +G VPD++TV K + +G +
Sbjct: 233 PPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVPDLMTVAKGLTSGYV 291
Query: 167 PIGAVITSRKI 177
P+GAV+ S +
Sbjct: 292 PMGAVLMSDHV 302
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 94.9 bits (236), Expect = 4e-22
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW--------- 51
+EA + A+++AR YT RQ I+ +HG + + ++S+ KP+
Sbjct: 125 AEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMT-------MTSKVKPYKFGFGPFAP 177
Query: 52 -VHVIPFPDTYRGEFSADDPQAAQKYAQAARN--IMEAHRDNIATLICEPVFVVHGAVVP 108
V+ PFP YR + Q + +N I E + IA ++ EPV G +VP
Sbjct: 178 EVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVP 237
Query: 109 PPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
++ + + E G + +ADEIQ G R+G +F A + VPD+ITV K +G G+PI
Sbjct: 238 SKKFVQEVRNICSEHGILFVADEIQTGFARTGKYF-AIEHFDVVPDLITVSKSLGAGVPI 296
Query: 169 GAVITSRKIAESLNCLDDNRP---SGKYLVRPLG 199
VI ++I +D++ P G Y PLG
Sbjct: 297 SGVIGRKEI------MDESAPGELGGTYAGSPLG 324
Score = 28.2 bits (63), Expect = 6.0
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 31/116 (26%)
Query: 151 AVPDIITVGKPMGNGMPIGAVITSR--KIAESLNCLDDNRPSGKYLVRPLGINLHIFWCL 208
AV DII + +G V+ +R ++ NC+ D VR LG
Sbjct: 330 AVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGD--------VRGLGA-------- 373
Query: 209 ILLSITYYLYRYTR---RMKEAKII-VANE--------GEYGNVLLFLPAMCLTTE 252
+ + R T+ + A I AN+ G YGNV+ L + +T E
Sbjct: 374 -MCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDE 428
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 95.0 bits (237), Expect = 4e-22
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 34/191 (17%)
Query: 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPR---AFMLSSEKK-------PW 51
E+N+ A+++AR +TGR+ I+ A+HG R + L++ K P
Sbjct: 126 ESNEAAIKIARYHTGRKYIIAFLGAFHG----------RTYGSLSLTASKPVQRKGFFPL 175
Query: 52 V----HVIPFPDTYRGEFSADDP----QAAQKYAQAA--RNIMEAHRDNIATLICEPVFV 101
+ HV P+P+ YR + ++P A + + + ++ + +A +I EP+
Sbjct: 176 MPGVIHV-PYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP--EEVAAIIVEPIQG 232
Query: 102 VHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKP 161
G VVPP + + + G ++I DE+Q GMGR+G +A + G PDIIT+ K
Sbjct: 233 EGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK-MFAIEHFGVEPDIITLAKA 291
Query: 162 MGNGMPIGAVI 172
+ G+P+GAVI
Sbjct: 292 IAGGLPLGAVI 302
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 95.0 bits (237), Expect = 4e-22
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 34/193 (17%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+EA A++LARAYTGR I+ + YHG + LL V T
Sbjct: 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLL----------------VKAGSGAAT 162
Query: 61 YRGEFSADDPQAAQKYA--------QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGW 112
S P K+ +A E + D+IA +I EPV G V P PG+
Sbjct: 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGF 222
Query: 113 LSLMYDYIHEIGGVVIADEIQCG----MGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
L + + E G ++I DE+ G +G + ++ G PD+ T+GK +G G+PI
Sbjct: 223 LEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY------GVEPDLTTLGKIIGGGLPI 276
Query: 169 GAVITSRKIAESL 181
GA +I E L
Sbjct: 277 GAFGGRAEIMEQL 289
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 93.6 bits (233), Expect = 1e-21
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW---------V 52
+AN+ A+++AR +TGR ++ +YHG A L+ + + W V
Sbjct: 123 DANEHAVRMARLHTGRPKVLSAYRSYHGGTGS-------AINLTGDPRRWPNDTGRAGVV 175
Query: 53 HVI-PFPDTYRGEFSADDPQ--AAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPP 109
H PF YR EF A + + A R I IA ++ E V G +VPP
Sbjct: 176 HFFGPFL--YRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPP 233
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGM-PI 168
PG+L+ + + G V+IADE+ G GR+G F A + G VPD+IT K + +G P+
Sbjct: 234 PGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLITFAKGVNSGYVPL 292
Query: 169 GAVITSRKIAE 179
G V S IA
Sbjct: 293 GGVAISEAIAA 303
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 91.6 bits (228), Expect = 3e-21
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 49/194 (25%)
Query: 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF----MLSSEK--------K 49
EAN+ AL+LAR +TG+ IV + ++HG R F EK
Sbjct: 97 EANEAALKLARKHTGKSKIVTFEQSFHG----------RTFGTMSATGQEKIKEGFGPLL 146
Query: 50 PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVH--GAVV 107
P +PF D +A + +M + +A ++ E VV G V+
Sbjct: 147 PGFTHVPFND-----------------IKALKEVMN---EEVAAVMLE---VVQGEGGVI 183
Query: 108 P-PPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGM 166
P P +L + + G ++I DE+Q G+GR+G+ F A++ G PDI+TV K +GNG+
Sbjct: 184 PADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDIVTVAKGLGNGI 242
Query: 167 PIGAVITSRKIAES 180
P+GA+I +++ +
Sbjct: 243 PVGAMIGKKELGTA 256
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 91.4 bits (228), Expect = 6e-21
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 28/198 (14%)
Query: 6 LALQ--LARAYTGRQNIVVVDAAYHG-TVNLL----LDISPRAFMLSSEKKPW---VHVI 55
+ALQ + G+ + YHG T + + F +P V I
Sbjct: 110 MALQYWQNQGRPGKTRFLAFRNGYHGDTFGAMSVGDVGGFHALF------EPLLFEVVFI 163
Query: 56 PFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGA---VVPPPGW 112
P P YR D + A ++E H D IA I EP +V GA PP +
Sbjct: 164 PAPPCYRCWDPDDC---EAECLAALEALLEEHADEIAAFIVEP--LVQGAGGMRFYPPEY 218
Query: 113 LSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAV 171
L + + E G ++IADEI G GR+G F A + G PDI+ + K + G +P+ A
Sbjct: 219 LRKLRELCDEYGVLLIADEIATGFGRTGKLF-ACEHAGVTPDILCLSKGLTGGYLPLAAT 277
Query: 172 ITSRKIAESLNCLDDNRP 189
+T+ +I E+ D+
Sbjct: 278 LTTDEIYEA--FYSDDEG 293
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 89.6 bits (223), Expect = 2e-20
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 36/180 (20%)
Query: 2 EANDLALQLARAYTGRQNIVVVDAAYHG-TVN-LLLDISPRAFMLSSEKKPW------VH 53
EAN+ A +LAR TGR IV + +HG T+ L L P +++ P+ V
Sbjct: 114 EANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQP------AKRAPFEPLPGGVE 166
Query: 54 VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWL 113
+P+ D A A D+ A + EP+ G V PP G+L
Sbjct: 167 HVPYGD-----------------VDALA---AAVDDDTAAVFLEPIQGEAGVVPPPAGYL 206
Query: 114 SLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVIT 173
+ + G +++ DE+Q G+GR+G ++A Q G PD++T+ K +G G+PIGA +
Sbjct: 207 AAAREITDRHGALLVLDEVQTGIGRTG-AWFAHQHDGVTPDVVTLAKGLGGGLPIGACLA 265
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 89.8 bits (223), Expect = 2e-20
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 29/191 (15%)
Query: 1 SEANDLALQLARAYT---GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW------ 51
+E+ + AL+LA+AY G+ + A+HG L +S A S+ +KP+
Sbjct: 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKS--LGALSATA--KSTFRKPFMPLLPG 206
Query: 52 VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPG 111
+PF + + + A + D++A +I EP+ G ++PP G
Sbjct: 207 FRHVPFGN-------IEAMRTALSECKKTG-------DDVAAVILEPIQGEGGVILPPEG 252
Query: 112 WLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGA 170
+L+ + E G ++I DE+Q GMGR+G +A + + PDI+ + K +G G MPIGA
Sbjct: 253 YLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHENVQPDILCLAKALGGGVMPIGA 311
Query: 171 VITSRKIAESL 181
I + ++ L
Sbjct: 312 TIATEEVFSVL 322
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 89.6 bits (223), Expect = 2e-20
Identities = 66/208 (31%), Positives = 96/208 (46%), Gaps = 43/208 (20%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLL--LDIS-------PRAFMLS 45
SEA + AL+LAR Y R++ + +YHG N L L I P A +L
Sbjct: 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHG--NTLGALAIGGNAWRREPFAPLLI 157
Query: 46 SEKKPWVHVIP-FPDTYRGEFSADDPQAAQKYAQAARN-----IMEAHRDNIATLICEPV 99
HV P + YR + Y Q + I+E D +A + E V
Sbjct: 158 ----EAHHVSPCYA--YREQ--RAGESDEA-YGQRLADELEAKILELGPDTVAAFVAETV 208
Query: 100 F-VVHGAVVPPPGWLSLMYDYIHEI----GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154
GAV P PG+ I E+ G ++I DE+ CGMGR+G +A + G PD
Sbjct: 209 VGATAGAVPPVPGYFK----RIREVCDRYGVLLILDEVMCGMGRTG-TLFACEEDGVAPD 263
Query: 155 IITVGKPMGNG-MPIGAVITSRKIAESL 181
++T+ K +G G PIGAV+ S +I +++
Sbjct: 264 LVTIAKGLGAGYQPIGAVLASDRIYDAI 291
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 89.3 bits (222), Expect = 3e-20
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 20/197 (10%)
Query: 1 SEANDLALQLARAY---TG---RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHV 54
SEA + A +LA+ Y TG + ++ AYHGT L I+ L + K P+ +
Sbjct: 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITG----LPAFKAPFEPL 177
Query: 55 IP----FPDT--YRGEFSADDPQAAQKYA--QAARNIMEAHRDNIATLICEPVFVVHGAV 106
+P P+T YR DDP+A ++A + I D +A + EPV G
Sbjct: 178 VPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCF 237
Query: 107 VPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG- 165
PPPG+ + + ++++DE+ C GR G F + G VPDIIT K + +G
Sbjct: 238 PPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVPDIITCAKGITSGY 296
Query: 166 MPIGAVITSRKIAESLN 182
P+GA+I S ++ E
Sbjct: 297 SPLGAMIASDRLFEPFL 313
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 88.5 bits (220), Expect = 5e-20
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN-LLLDISPRAFMLSSEKKPWVHVIPFPD 59
+EA A++LAR YTGR I+ + YHG + LL+ A L P V
Sbjct: 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKL 173
Query: 60 TYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDY 119
T + +D +A ++ + E + + IA +I EPV G V P P +L+ +
Sbjct: 174 TLVLPY--NDLEALEE-------VFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRAL 224
Query: 120 IHEIGGVVIADEIQCG--MGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKI 177
E G ++I DE+ G + G A + G PD+ T+GK +G G+P+GA R+I
Sbjct: 225 TEEYGSLLIFDEVMTGFRVALGG----AQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREI 280
Query: 178 AESLNCLDDNRPSGK 192
E L P G
Sbjct: 281 MERLA------PEGP 289
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 87.4 bits (216), Expect = 2e-19
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 21/183 (11%)
Query: 1 SEANDLALQLARAYT---GRQNIVVVDAAYHG-TVNLLLDISPRAFMLSSEKKPWVHVIP 56
+E+ + AL+LA+AY G+ + A+HG ++ L + AF +KP++ ++P
Sbjct: 144 TESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAF-----RKPFMPLLP 198
Query: 57 -FPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSL 115
F G+ A A N + D++A +I EP+ G ++PP G+L
Sbjct: 199 GFHHVAFGDIEA---------MLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPA 249
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITS 174
+ E G ++I DE+Q GMGR+G F A + +G PDI+ + K +G G MPIGA I +
Sbjct: 250 VRALCDEFGALLILDEVQTGMGRTGKMF-ACEHEGVQPDILCLAKALGGGVMPIGATIAT 308
Query: 175 RKI 177
+
Sbjct: 309 EAV 311
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 87.0 bits (216), Expect = 2e-19
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKK----P 50
SEAN+ A ++AR Y R + AYHG L + +A ++K P
Sbjct: 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQA-----QRKYKYEP 169
Query: 51 ----WVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIM-EAHRDNIATLICEPVFVVHGA 105
++HV P PD YR + + + +M + IA +I EP+ G
Sbjct: 170 LAPGFLHVPP-PDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGV 228
Query: 106 VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG 165
++PP ++ + + + G ++I+DE+ CG GR+G F F G PDIIT+ K + +
Sbjct: 229 LMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKPDIITMAKGITSA 287
Query: 166 -MPIGAVITSRKIAESLNCLDDN 187
+P+ A ++I E+ +
Sbjct: 288 YLPLSATAVKKEIYEAFKGKGEY 310
Score = 33.4 bits (77), Expect = 0.12
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 225 KEAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269
KE +I+ G+ Y NVL P + +++E + FIV TL ++
Sbjct: 403 KEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 85.2 bits (211), Expect = 9e-19
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 1 SEANDLALQLA------RAYTGRQNIVVVDAAYHG-TVNL-------LLDISPRAFMLSS 46
+ A ++A+++A + +Q V + AYHG T+ L + + +
Sbjct: 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEA 185
Query: 47 EKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGA- 105
+P+P TYR + D + +K+ + +++ + IA +I EP +V GA
Sbjct: 186 ------IKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEP--LVQGAG 237
Query: 106 --VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG 163
+ P G+L + + + + I DE+ G GR+G F A + + PDI+T GK +
Sbjct: 238 GMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTPDIMTAGKGLT 296
Query: 164 NG-MPIGAVITSRKIAES 180
G +PI +T+ +I +
Sbjct: 297 GGYLPIAITVTTDEIYNA 314
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 84.0 bits (208), Expect = 2e-18
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL----DISPRAFMLSSEKKPWVHVIP 56
++A + A++LA+ YTGR N++ YHG + L ++SP+ + + P V +P
Sbjct: 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV--NGLMPGVQFMP 188
Query: 57 FPDTYR------GEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPP 110
+P YR GE A Y + +E+ A +I E + G V P P
Sbjct: 189 YPHEYRCPLGIGGEAGVK---ALTYYFENFIEDVESGVRKPAAVILEAI-QGEGGVNPAP 244
Query: 111 -GWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIG 169
WL + + + G ++I DE+Q G R+G F AF+ G PDII + K +G G+P+
Sbjct: 245 VEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPDIIVMSKAVGGGLPL- 302
Query: 170 AVITSRK 176
AV+ +K
Sbjct: 303 AVLGIKK 309
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 83.8 bits (207), Expect = 2e-18
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW--VHVIPFP 58
++A + A++LA+ YTGR N++ +HG L ++ F ++ V +P+P
Sbjct: 112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP 171
Query: 59 DTYRGEFSADDPQAAQKYAQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSL 115
YR F + + N +E + D A +I E + G V P WL
Sbjct: 172 HEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQK 231
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSR 175
+ + + +I DE+Q G GRSG+ +AF+ G PD + + K +G G+P+ ++ +
Sbjct: 232 IREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAP 290
Query: 176 K 176
+
Sbjct: 291 E 291
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 83.6 bits (207), Expect = 4e-18
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 41/215 (19%)
Query: 1 SEANDLALQLARAYTGR------QNIVVVDAAYHGTVNLLLDISPRA-----FMLSSEKK 49
S A D AL+ Y ++I+ AYHG+ L ++ +A F +S+
Sbjct: 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDL- 180
Query: 50 PWVHVIPFPDTYRGEFSADDPQAAQKYAQAA----------RNIMEAHRDNIATLICEPV 99
VH + P+ YR ++AA I+ DNIA I EP+
Sbjct: 181 --VHHLSSPNPYR---------RPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPI 229
Query: 100 FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPDIITV 158
G +VPPPG+ + M + + I+DE+ G GR G HF+A + G PDIIT
Sbjct: 230 LGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG-HFFASEAVFGIQPDIITF 288
Query: 159 GKPMGNG-MPIGAVITSRKIAESLNCLDDNRPSGK 192
K + +G P+GAVI S ++ + + + P+ K
Sbjct: 289 AKGLTSGYQPLGAVIISERLLDVI-----SGPNAK 318
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 82.4 bits (204), Expect = 9e-18
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 50/209 (23%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGT------VN-----------LLLDI 37
S++ + AL+LAR Y R + + YHGT VN LL
Sbjct: 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLL--- 170
Query: 38 SPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQA-AQKYAQA-ARNIMEAHRDNIATLI 95
P + P YR F+ DP+ A+ A+ R I D IA I
Sbjct: 171 ------------PGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFI 218
Query: 96 CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHF----WAFQTQGA 151
EPV G +VPP + L+ + G ++IADE+ G GR+GS F W G
Sbjct: 219 AEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGW-----GV 273
Query: 152 VPDIITVGKPMGNG-MPIGAVITSRKIAE 179
PDI+ + K + +G +P+GA + + +IA+
Sbjct: 274 KPDIMCLAKGITSGYVPLGATMVNARIAD 302
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 81.4 bits (202), Expect = 1e-17
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 49/199 (24%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS---SEKK- 49
+EA + A++ AR Y R I+ + A+HG R ++ EK
Sbjct: 98 AEAVECAIKTARRYHYGKGHPERYRIITFEGAFHG----------RTLATIAAGGQEKYL 147
Query: 50 -------PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVV 102
P +PF D +A + A N A ++ EP+
Sbjct: 148 EGFGPLVPGFDQVPFGDI-----------------EALKA---AITPNTAAILIEPIQGE 187
Query: 103 HGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPM 162
G P +L + E G ++I DE+QCGMGR+G +A + G PDI+ V K +
Sbjct: 188 GGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK-LFAHEWAGVTPDIMAVAKGI 246
Query: 163 GNGMPIGAVITSRKIAESL 181
G G P+GA + + + A+ +
Sbjct: 247 GGGFPLGACLATEEAAKGM 265
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 81.3 bits (201), Expect = 2e-17
Identities = 61/188 (32%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLD-ISP------RAFMLSSEKKPWVH 53
+ A +AL+LAR TG +V + ++HG LD IS R M V
Sbjct: 140 TSAIGMALKLARHITGNFKVVSLWDSFHGAS---LDAISVGGEACFRQGM--GPLMAGVE 194
Query: 54 VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWL 113
IP +YRG F D + YA ++E I I E V VP +
Sbjct: 195 RIPPAVSYRGAFPDAD-GSDVHYADYLEYVIEKEGG-IGAFIAEAVRNTD-VQVPSKAY- 250
Query: 114 SLMYDYIHEI----GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGM-PI 168
+ + EI ++I DEI GMGR+G F Q G PDI+ +GK +G G+ PI
Sbjct: 251 ---WKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDILCIGKGLGGGLVPI 306
Query: 169 GAVITSRK 176
A+IT K
Sbjct: 307 AAMITKDK 314
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 80.5 bits (199), Expect = 3e-17
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPG-WLSLMYDYIHEIGGVVIADEIQCGM 136
+AAR +++ + A + EPV G + P +L + E G +++ DE+QCG+
Sbjct: 157 EAARKLIQ--KGKTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGL 213
Query: 137 GRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLN 182
GR+G + WA + G PDI+T+ KP+ G+PIGAV+ + K+A ++N
Sbjct: 214 GRTG-YLWAHEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAIN 258
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 80.4 bits (198), Expect = 4e-17
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKK------PWVHV 54
S+A D+A+++++ T R I+ AYHG L + A SS+K+ P V
Sbjct: 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQT---LGATSVAAFQSSQKRGFSPLMPNVVW 179
Query: 55 IPFPDTYRGEFSADDPQAAQKYAQAARNIME----AH---RDNIATLICEPVFVVHGAVV 107
IP+P+ YR + + + + + +E +H D +A L EP+ G VV
Sbjct: 180 IPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVV 239
Query: 108 PPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMP 167
PP + + + E G +++ DE+Q G+GR+G F A + PD+I GK + +GM
Sbjct: 240 PPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFEVKPDLIIFGKGVASGMG 298
Query: 168 IGAVITSRKIAE 179
+ VI +++ +
Sbjct: 299 LSGVIGRKELMD 310
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 80.2 bits (198), Expect = 5e-17
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHV 54
+EAN+ AL+LAR Y + + IV A+HG F +S+ +P
Sbjct: 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRT---------LFTVSAGGQP---- 152
Query: 55 IPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHR----DNIATLICEPVFVVHGAVVPP- 109
++S D AA N + + D +I EP+ G V+P
Sbjct: 153 ---------KYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVEPI-QGEGGVIPAD 202
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIG 169
+L + + ++I DE+Q G+GR+G +A+ G PD++T K +G G PIG
Sbjct: 203 KAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYMHYGVTPDVLTTAKALGGGFPIG 261
Query: 170 AVITSRKIAESLN 182
A++T+ K A +
Sbjct: 262 AMLTTEKCASVMT 274
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 80.0 bits (198), Expect = 6e-17
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN-LLLDIS-----PRAFMLSSEKKPWVH- 53
++AN L+ ARA TGR I+V + YHGTV+ + +D+ R +L
Sbjct: 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATT 199
Query: 54 -VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGW 112
V+ F D AA + A A ++ A ++ EP G V+P PG+
Sbjct: 200 RVVEFNDL-----------AALEAALADGDV--------AAVLAEPAMTNIGMVLPEPGF 240
Query: 113 LSLMYDYIHEIGGVVIADE---IQCGM-GRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
+ + G +++ DE I G G + +H G PD + VGKP+ G+P
Sbjct: 241 HEALRELTRRYGTLLVIDETHTISSGPGGYTRAH-------GLEPDFLVVGKPIAGGVPC 293
Query: 169 GAVITSRKIAESLNCLDDNRPSG 191
S ++AE + P G
Sbjct: 294 AVYGFSAELAERAQAAKASAPPG 316
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 79.7 bits (197), Expect = 8e-17
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 7 ALQLARAYTGRQNIVVVDAAYHG----TVNLLLDISPR----AFMLSSEKKPWVHVIPFP 58
AL+L + TGR ++ YHG ++L+ ++ P+ A + P V +P+P
Sbjct: 143 ALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALL------PGVQFLPYP 196
Query: 59 DTYRGEF---SADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHG--AVVPPP-GW 112
YR F +A Y + + E+ A +I E VV G V+P P W
Sbjct: 197 YDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILE---VVQGEGGVIPAPIEW 253
Query: 113 LSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVI 172
L + E G +I DEIQ G GR+G +AF+ G +PD++ + K +G +P+ V+
Sbjct: 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGK-MFAFEHAGIIPDVVVLSKAIGGSLPLAVVV 312
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 79.4 bits (196), Expect = 9e-17
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNL----LLDISP--RAF---MLS 45
SE+ D AL++A AY R ++ + YHG V + I P +AF +
Sbjct: 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHG-VGFGGISVGGIVPNRKAFGALLPG 174
Query: 46 SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAH-RDNIATLICEPVFVVHG 104
+ P D R FS P+ + A ++ H IA +I EPV G
Sbjct: 175 VDHLPHTL-----DLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTG 229
Query: 105 AVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGN 164
++PP G+L + + + G ++I DE+ G GR G+ F A Q G PD++T K + N
Sbjct: 230 VLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAA-QYFGVTPDLLTCAKGLTN 288
Query: 165 G-MPIGAVITSRKI 177
G +P+GAV S +I
Sbjct: 289 GAIPMGAVFVSSEI 302
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 77.8 bits (192), Expect = 3e-16
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDIS---PRAFMLSS--EKK 49
SEAN+ A+++A + G+ I+ +YHG L +S R S E
Sbjct: 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDY 160
Query: 50 PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIME---AHRDNIATLICEPVFVVHG-A 105
P I P YR P A +E A IA I EP+ G A
Sbjct: 161 P---TISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEH--IAAFIAEPIIGAAGAA 215
Query: 106 VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG 165
VVPP G+ ++ + + IADE+ G+GR+G+ F A + G PDI+T+GK +G G
Sbjct: 216 VVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVEPDIMTLGKGLGAG 274
Query: 166 -MPIGAVITSRKIAE 179
PI A + S ++ E
Sbjct: 275 YTPIAATVVSDRVME 289
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 77.9 bits (192), Expect = 3e-16
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHV 54
+EAN+ AL+LAR Y + IV ++HG F +S +P
Sbjct: 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRT---------LFTVSVGGQP---- 148
Query: 55 IPFPDTYRGEFSADDPQAAQKYAQAARNIMEAH-RDNIATLICEPVFVVHGAVVPP-PGW 112
Y F A P + +A D +I EP+ G VVP P +
Sbjct: 149 -----KYSQGF-APLPGGIKHAPYNDLAAAKALISDKTCAVIVEPI-QGEGGVVPADPAF 201
Query: 113 LSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVI 172
L + + ++I DE+Q G+GR+G +A+ G PDI+T K +G G PIGA++
Sbjct: 202 LKGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYMHYGVTPDILTSAKALGGGFPIGAML 260
Query: 173 TSRKIAESL 181
T+ +IA L
Sbjct: 261 TTTEIAAHL 269
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 77.5 bits (191), Expect = 3e-16
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 25/183 (13%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM---LSSEKKPW-VHVIP 56
+EA + A+++ARAYTGR ++ A+HG R + L+ + P+ V P
Sbjct: 111 AEAVENAVKIARAYTGRPGVIAFGGAFHG----------RTLLTMALTGKVAPYKVGFGP 160
Query: 57 FPDTYRGEFSADDPQAAQ--KYAQAARNIMEAHR-----DNIATLICEPVFVVHGAVVPP 109
FP + F A P +A ++ + D +A ++ EP+ G V P
Sbjct: 161 FPGSI---FHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAP 217
Query: 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIG 169
P ++S + E G ++IADE+Q G R+G F A + PD+IT+ K +G GMPI
Sbjct: 218 PEFMSALRTLCDEHGILLIADEVQTGFARTGKLF-AMEYYDVKPDLITMAKSLGGGMPIS 276
Query: 170 AVI 172
AV+
Sbjct: 277 AVV 279
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 77.1 bits (190), Expect = 6e-16
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM---LSSEKKPW------ 51
+EA + A+++ARA TGR ++ +HG R FM L+ + P+
Sbjct: 111 AEAVENAVKIARAATGRSAVIAFGGGFHG----------RTFMGMSLTGKVVPYKVGFGA 160
Query: 52 ----VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRD--NIATLICEPVFVVHGA 105
V+ +PFP G S + AA + +A D +A +I EPV G
Sbjct: 161 MMPDVYHVPFPVELHG-VSVEQSLAALD------KLFKADVDPQRVAAIIIEPVQGEGGF 213
Query: 106 VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG 165
P ++ + + + G ++IADE+Q G R+G F A + D+ T+ K + G
Sbjct: 214 YPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEVAADLTTMAKGLAGG 272
Query: 166 MPIGAVITSRKIAESLNCLDDNRPSGKYLVRPLGI 200
P+ AV T R AE ++ G Y PLGI
Sbjct: 273 FPLAAV-TGR--AEIMDAPGPGGLGGTYGGNPLGI 304
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 76.5 bits (188), Expect = 8e-16
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 1 SEANDLALQLARAYTGRQN-------IVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVH 53
+EAN+ A++L R + Q IV ++HG + A +++ K
Sbjct: 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGR-------TLAAVTATAQPKYQEG 160
Query: 54 VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWL 113
P P +R D A ++A ++ EP+ G + PG+L
Sbjct: 161 YEPLPGGFRYVDFNDVEALEAAMAGG----------DVAAVMLEPIQGEGGVMPAAPGFL 210
Query: 114 SLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVIT 173
+ + + +++ DEIQCGMGR+G+ F +Q Q PDI+T+ K +G G PIGA++
Sbjct: 211 ARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQ-VTPDIVTLAKALGGGFPIGAMLA 269
Query: 174 SRKIAESL 181
K+AE++
Sbjct: 270 GPKVAETM 277
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 76.0 bits (187), Expect = 1e-15
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 33/186 (17%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP-- 58
SEA + A+++ARA T R ++ AYHG + L ++ + V P+
Sbjct: 112 SEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGK-------------VNPYSAG 158
Query: 59 ------DTYRGEF-------SADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGA 105
YR + S DD A+ + + +N +A ++IA +I EPV G
Sbjct: 159 MGLMPGHVYRALYPCPLHGVSEDDAIASIE--RIFKN--DAAPEDIAAIIIEPVQGEGGF 214
Query: 106 VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG 165
P ++ + E G ++IADE+Q G GR+G+ +A + G D+ T K + G
Sbjct: 215 YAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQMGVAADLTTFAKSIAGG 273
Query: 166 MPIGAV 171
P+ V
Sbjct: 274 FPLAGV 279
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 75.9 bits (187), Expect = 1e-15
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+EA L+LARAYTGR+ I+ + YHG + +F++ + V + PD
Sbjct: 165 TEACMGVLRLARAYTGREKIIKFEGCYHGHAD--------SFLVKAGSG--VATLGLPD- 213
Query: 61 YRGEFSADDPQAAQKYA--------QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGW 112
S P+AA +A + + EA++ IA +I EPV G +VP +
Sbjct: 214 -----SPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEF 268
Query: 113 LSLMYDYIHEIGGVVIADEIQCGM----GRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
L + + E G +++ DE+ G G + +F G PD+ T+GK +G G+P+
Sbjct: 269 LEGLREITKENGALLVFDEVMTGFRIAYGGAQEYF------GITPDLTTLGKVIGGGLPV 322
Query: 169 GAVITSRKIAE 179
GA R+I E
Sbjct: 323 GAYGGRREIME 333
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 75.2 bits (186), Expect = 2e-15
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 29/194 (14%)
Query: 7 ALQ--LARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW------VHVIPFP 58
ALQ R GR + + YHG + + R M + PFP
Sbjct: 122 ALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGM----HALYTPLLFEQVTAPFP 177
Query: 59 DTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGA---VVPPPGWLSL 115
D Q A ++E H IA I EP +V GA + P +L+
Sbjct: 178 --------PDG--YEQATLDALEALLEKHAGEIAAFIVEP--LVQGAGGMLFYDPRYLAE 225
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITS 174
+ G ++I DEI G GR+G+ F A + G PDI+ + K + G +P+ A + +
Sbjct: 226 LRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPDIMCLSKGLTGGYLPLAATLCT 284
Query: 175 RKIAESLNCLDDNR 188
+I E+ D +
Sbjct: 285 AEIFEAFYSDDRAK 298
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 75.0 bits (184), Expect = 2e-15
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 28/178 (15%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+EA + AL+ AR YTGR+ I+ + A+HG LS+ KP
Sbjct: 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRT---------MGALSATWKP---------K 132
Query: 61 YRGEFSADDPQAAQKYAQAARNIMEAHRDNI----ATLICEPVFVVHGAVVPPPGWLSLM 116
YR +F P + N +EA ++ I A +I EP+ G V ++ +
Sbjct: 133 YREDFEPLVP----GFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTL 188
Query: 117 YDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITS 174
D ++G ++IADE+Q G+ R+G F A + PDI+T+GK +GNG+P+ +T+
Sbjct: 189 RDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYKVEPDIVTMGKGIGNGVPVSLTLTN 244
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 75.0 bits (185), Expect = 3e-15
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 53/200 (26%)
Query: 2 EANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSS--------- 46
EAN+ A +LAR Y + I+ ++HG R S
Sbjct: 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHG----------RTLFTVSVGGQPKYSD 157
Query: 47 --EKKPW--VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVV 102
KP HV PF D A + +++ D+ ++ EP+
Sbjct: 158 GFGPKPADITHV-PFNDL-----------------AAVKAVID---DHTCAVVVEPI-QG 195
Query: 103 HGAVVPP-PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKP 161
G V+P P +L + + + ++I DE+Q GMGR+G +A+ G PDI+T K
Sbjct: 196 EGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-DLFAYMHYGVTPDILTSAKA 254
Query: 162 MGNGMPIGAVITSRKIAESL 181
+G G PIGA++T+ +IA
Sbjct: 255 LGGGFPIGAMLTTAEIASHF 274
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 74.2 bits (183), Expect = 5e-15
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 39/205 (19%)
Query: 1 SEANDLALQLARAY------------TGRQNIVVVDAAYHGTVNLLLDISPRAFM--LSS 46
SEAND L++ R Y R+N YHG+ + +M
Sbjct: 121 SEANDTVLRMVRHYWALKGKPQKKVIISRKN------GYHGSTVAGASLGGMKYMHEQGD 174
Query: 47 EKKPWVHVIPFPDTYRGEFSADDP-----QAAQKYAQAARNIMEAHRDNIATLICEPVFV 101
P + I P + GE P AA+ Q I+E DN+A I EP+
Sbjct: 175 LPIPGIVHIDQPYWF-GEGGDMTPEEFGLAAAR---QLEAKILELGADNVAAFIGEPIQG 230
Query: 102 VHGAVVPPPGWLSLMYDYIHEI----GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157
G ++PP + + I I +++ADE+ CG GR+G ++ Q G PD++T
Sbjct: 231 AGGVIIPPATY----WPEIQRICRKYDILLVADEVICGFGRTG-EWFGSQHFGIKPDLMT 285
Query: 158 VGKPMGNG-MPIGAVITSRKIAESL 181
+ K + +G +P+GAV ++AE L
Sbjct: 286 IAKGLTSGYIPMGAVGVGDRVAEVL 310
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 73.9 bits (182), Expect = 7e-15
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 36/204 (17%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHG-TV---NLL-LDISPRAFMLSSEKK 49
SEAND ++L Y ++ I+ YHG T+ +L L + R+F L
Sbjct: 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLP---L 175
Query: 50 PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARN----IMEAHRDNIATLICEPVFVVHGA 105
+ P YR F + A I+ D IA I EPV G
Sbjct: 176 DRILHTGCPHYYR--FGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGV 233
Query: 106 VVPPPGWLSLMYDYIHEIGGV-------VIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158
+VPP Y +I V ++ADE+ CG GR+G+ F +T G PDI+ +
Sbjct: 234 IVPPKT-------YWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGIKPDILVM 285
Query: 159 GKPMGNG-MPIGAVITSRKIAESL 181
K + + P+ AV+ + K+ + +
Sbjct: 286 SKQLSSSYQPLSAVLMNEKVYDPI 309
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 73.2 bits (180), Expect = 9e-15
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT 148
N+A I EP+ G +VP G+L +Y+ + ++I DEIQ G+GR+G A
Sbjct: 177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG-KLLAHDH 235
Query: 149 QGAVPDIITVGKPMGNGM-PIGAVITSRKIAESLN 182
+G PDI+ +GK + G+ PI AV+ + + +
Sbjct: 236 EGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIK 270
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 73.5 bits (180), Expect = 9e-15
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPW---VHVIPF 57
+EA + A+++ARA+TGR ++ +HG + + ++ + P+ V+ +P+
Sbjct: 111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPY 170
Query: 58 PDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMY 117
P G + D A ++ ++ + +A +I EPV G V P ++ +
Sbjct: 171 PSDLHGISTQDSLDAIERLFKS-----DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIR 225
Query: 118 DYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKI 177
E G V+IADE+Q G R+G F A PD++T+ K + GMP+ V+ + I
Sbjct: 226 RLCDEHGIVMIADEVQSGFARTGKLF-AMDHYADKPDLMTMAKSLAGGMPLSGVVGNANI 284
Query: 178 AES 180
++
Sbjct: 285 MDA 287
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 72.2 bits (177), Expect = 2e-14
Identities = 74/316 (23%), Positives = 127/316 (40%), Gaps = 85/316 (26%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF--MLSSEKKPWVHVIPFP 58
+EAN+ A+++AR TG+Q I+ ++HG R F M ++ +
Sbjct: 94 AEANEAAIKIARKATGKQEIITFQNSFHG----------RTFGSMSATGQ---------- 133
Query: 59 DTYRGEFSADDPQAAQKYAQAARNIMEAHR----DNIATLICEPVFVVHGAVVPPPGWLS 114
D + F P ++ A N + + + N A ++ E V G + ++
Sbjct: 134 DKIKDGFGDGVPH----FSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVK 189
Query: 115 LMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITS 174
+ DY E G ++I DE+Q GMGR+G + AF+ G PDI T+ K + NG+P+GA++
Sbjct: 190 ALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPDIFTLAKGLANGVPVGAMLAK 248
Query: 175 RKIAESL-----------------------------NCLDDNRPSGKYL----------- 194
+ + L+ +G YL
Sbjct: 249 SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDK 308
Query: 195 -----VRPLGINLHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCL 249
VR LG +I + T L + ++ +IV G NV+ LP + L
Sbjct: 309 ETVTTVRGLGY-------MIGIETTADLSQLVEAARDKGLIVLTAGT--NVIRLLPPLTL 359
Query: 250 TTENVLFIVSTLNRIF 265
T E + ++ L+ +F
Sbjct: 360 TKEEIEQGIAILSEVF 375
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 71.6 bits (176), Expect = 4e-14
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 45/195 (23%)
Query: 2 EANDLALQLAR--AY------TGRQNIVVVDAAYHG-TVNLLLDISPRAFMLSSEKK--- 49
EA + A++LAR Y + IV +HG T+ IS +S++
Sbjct: 105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGA---IS-----MSTDPDSRT 156
Query: 50 ------PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVH 103
P IP+ + +A +E H N+ I EP+
Sbjct: 157 NFGPYVPGFKKIPYNNL-----------------EALEEALEDHGPNVCAFIVEPIQGEA 199
Query: 104 GAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG 163
G VVP G+L + + + ++IADEIQ G+GR+G + PDI+ +GK +
Sbjct: 200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK-LLCVDHENVKPDIVLLGKALS 258
Query: 164 NGM-PIGAVITSRKI 177
G+ P+ AV+ +
Sbjct: 259 GGVYPVSAVLADDDV 273
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 68.9 bits (170), Expect = 3e-13
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 36/188 (19%)
Query: 7 ALQLARAYTGRQNIVVVDAAYHGTVN-LLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEF 65
A++LAR YTGR I+ + YHG + LL+ A L PD
Sbjct: 122 AIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGL-----------PD------ 164
Query: 66 SADDPQAAQKY--------AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMY 117
S P+ K+ +A + E + D IA +I EPV G V P PG+L +
Sbjct: 165 SPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLR 224
Query: 118 DYIHEIGGVVIADEIQCG--MGRSG--SHFWAFQTQGAVPDIITVGKPMGNGMPIGAVIT 173
+ E G ++I DE+ G + G ++ G PD+ T+GK +G G+P+GA
Sbjct: 225 ELCDEHGALLIFDEVMTGFRVALGGAQGYY------GVTPDLTTLGKIIGGGLPVGAFGG 278
Query: 174 SRKIAESL 181
R+I E L
Sbjct: 279 RREIMEQL 286
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 68.7 bits (169), Expect = 4e-13
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNL----LLDISP--RAF---MLS 45
SE+ D AL++A AY R ++ + YHG V + I + F +
Sbjct: 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHG-VGFGGISVGGIVNNRKMFGGLLPG 177
Query: 46 SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAH-RDNIATLICEPVFVVHG 104
+ P +P FS P+ + A ++ H IA +I EP+ G
Sbjct: 178 VDHLPHTLDLP-----ENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAG 232
Query: 105 AVVPPPGWLSLMYDYIHEI----GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160
+VPP G+L + EI G ++I DE+ G GR G+ F A + G PDIIT K
Sbjct: 233 VLVPPKGYL----QRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVTPDIITFAK 287
Query: 161 PMGNG-MPIGAVITSRKI 177
+ NG +P+GAVI S +I
Sbjct: 288 GLTNGAIPMGAVIASDEI 305
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 67.7 bits (166), Expect = 7e-13
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 3 ANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP-DTY 61
A + AL+LAR TGR N+V A+HG L ++ F P +V P D Y
Sbjct: 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGY 170
Query: 62 RGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIH 121
G D +K + + + + D A +I E V G V WL +
Sbjct: 171 LGG-DVDTIAYFEKLLEDSSSGV----DLPAAVILETVQGEGGINVASDEWLQRLEKLCR 225
Query: 122 EIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPM-GNGMP 167
++I D+IQ G GR+G F++F+ G PDI+ + K + G G+P
Sbjct: 226 RHDILLIVDDIQAGCGRTG-TFFSFEPAGIEPDIVCLSKSISGYGLP 271
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 67.1 bits (164), Expect = 1e-12
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 48/196 (24%)
Query: 1 SEANDLALQLAR--AY------TGRQNIVVVDAAYHG-TVNLLLDISPRAFMLSSEKK-- 49
+EA + A++ AR AY + I+ + +HG T+ A LSSE++
Sbjct: 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMA--------AVSLSSEEEYK 158
Query: 50 -------PWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVV 102
P + IP+ D + A N A + EP+
Sbjct: 159 RGFGPMLPGIKKIPYGD--------------------LEALKAAITPNTAAFLVEPIQGE 198
Query: 103 HGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPM 162
G +PP G+L + E + IADEIQ G+GR+G F A PD+ +GK +
Sbjct: 199 AGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPDMYILGKAL 257
Query: 163 GNGM-PIGAVITSRKI 177
G G+ PI V +R I
Sbjct: 258 GGGVFPISCVAANRDI 273
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 65.2 bits (159), Expect = 5e-12
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 3 ANDLALQL--ARAYTGRQNIVVVDAAYHG-TVNLLLDISPRAFM--LSSEKKPWVHVIPF 57
A +ALQ A+ R + + YHG T + + P M L + P + +P
Sbjct: 120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQ 179
Query: 58 PDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGA---VVPPPGWLS 114
P GE D+ + ++++E D IA LI EP VV GA P +L
Sbjct: 180 PSIKFGEEWNDEA------IEPLQDLLEQKGDEIAALILEP--VVQGAGGMYFYSPTYLV 231
Query: 115 LMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVIT 173
+ + G ++I DEI G GR+G F A + G VPDI+ +GK + G + + A IT
Sbjct: 232 KARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPDIMCIGKALTGGYLTLSATIT 290
Query: 174 SRKIAESL 181
+ IA+++
Sbjct: 291 TEAIAQTI 298
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 64.7 bits (158), Expect = 8e-12
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 38/190 (20%)
Query: 1 SEANDLALQLARAYTGRQN------IVVVDAAYHG-TVNLLLDISPRAFMLSSEKKPWVH 53
+EAN+ A++LAR + GR++ I+ D ++HG T+ A M +S K W
Sbjct: 103 AEANEGAIKLARKW-GRKHKNGAYEIITFDHSFHGRTL---------ATMSASGKPGW-- 150
Query: 54 VIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHR----DNIATLICEPVFVVHGAVVPP 109
DT F+ PQ + +A N + + D ++ EPV G V+P
Sbjct: 151 -----DTI---FA---PQVP-GFPKAELNDIASVEKLITDKTVAVMLEPV-QGEGGVIPA 197
Query: 110 -PGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
++ + + G ++I DE+Q G GR+G+ F A++ G PDI+T+GK +G G+P+
Sbjct: 198 TREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF-AYELSGIEPDIMTLGKGIGGGVPL 256
Query: 169 GAVITSRKIA 178
A++ ++A
Sbjct: 257 AALLAKAEVA 266
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 63.6 bits (155), Expect = 2e-11
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 83 IMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH 142
I E D IA + EP+ G V+PP G+L + + + ++IADEIQ G+ R+G
Sbjct: 217 IFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKM 276
Query: 143 FWAFQTQGAVPDIITVGKPMGNGM-PIGAVITSRKI 177
A + PD++ +GK +G G+ P+ AV+ + +
Sbjct: 277 L-ACDWEEVRPDVVILGKALGGGVIPVSAVLADKDV 311
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 63.1 bits (154), Expect = 2e-11
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+EA +++ARAYTGR I+ YHG +L+L V P T
Sbjct: 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVL----------------VAAGSGPST 162
Query: 61 YRGEFSADDPQA-AQKYA-------QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGW 112
SA P++ AQ+ +A + ++ D +A ++ EP+ G V P PG+
Sbjct: 163 LGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGF 222
Query: 113 LSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT-QGAVPDIITVGKPMGNGMPIGA 170
L + + HE G +VI DE+ + Q G PD+ +GK +G G+PIGA
Sbjct: 223 LEAVNELAHEAGALVIYDEVITAF---RFMYGGAQDLLGVEPDLTALGKIIGGGLPIGA 278
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 62.1 bits (151), Expect = 6e-11
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 42/208 (20%)
Query: 1 SEANDLALQLARAYT---GRQN---IVVVDAAYHGTVNLLLDIS-----------PRAFM 43
SEAND ++L Y GR N + +YHG+ + +S P F+
Sbjct: 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFV 220
Query: 44 LSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARN-IMEAHRDNIATLICEPVFVV 102
L ++ P P EFS + A N I++ + IA I EPV
Sbjct: 221 LHTDC-PHYWRFHLPGETEEEFST-------RLADNLENLILKEGPETIAAFIAEPVMGA 272
Query: 103 HGAVVPPPGWLSLMYDYIHEIGGVV-------IADEIQCGMGRSGSHFWAFQTQGAVPDI 155
G V+PPP Y +I V+ IADE+ C GR G+ F PD+
Sbjct: 273 -GGVIPPPA------TYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYNIKPDL 324
Query: 156 ITVGKPMGNG-MPIGAVITSRKIAESLN 182
+++ K + + MPIGAV+ S +I++ ++
Sbjct: 325 VSLAKALSSAYMPIGAVLVSPEISDVIH 352
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 61.6 bits (150), Expect = 8e-11
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 81 RNIMEAHRDNIATLICEPVFVVHGA---VVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG 137
+M AHR IA +I EP+ V GA + P WL + G ++IADEI G G
Sbjct: 195 ARLMAAHRHEIAAVILEPI--VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFG 252
Query: 138 RSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIAESL 181
R+G F A + G PDI+ +GK + G M + A +T+R++AE++
Sbjct: 253 RTGKLF-ACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETI 296
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 61.5 bits (150), Expect = 8e-11
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138
AR E H +IA I EP+ G P + + M + E ++I DE+Q G+G
Sbjct: 214 QARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273
Query: 139 SGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNCLDDN 187
+G+ WA+Q G PDI+ GK + ++ R++ E ++DN
Sbjct: 274 TGT-AWAYQQLGVRPDIVAFGKK----TQVCGIMAGRRVDE----VEDN 313
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 61.4 bits (149), Expect = 1e-10
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLL----------DISPRAFMLSSEKKP 50
+EA A++LAR TGR I+ YHG + LL D + P
Sbjct: 120 TEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVD-TDLAHP 178
Query: 51 WVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPP 110
+P+ D Q + +M + +A +I EP+ G V+P P
Sbjct: 179 LTLSLPYNDF-----------------QIFQTVMNSLGHRVAGVIFEPICANMGVVLPKP 221
Query: 111 GWLSLMYDYIHEIGGVVIADEIQCG--MGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168
G++ + G + I DE+ G + + G A PDI GK +G G+P
Sbjct: 222 GFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGG----AAAIYHVKPDITVYGKILGGGLPA 277
Query: 169 GAVITSRKIAESL 181
AV+ + I + L
Sbjct: 278 AAVVAHKSIMDHL 290
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 60.4 bits (147), Expect = 2e-10
Identities = 52/203 (25%), Positives = 70/203 (34%), Gaps = 70/203 (34%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
S+A A++LARAYTGR + A H PF
Sbjct: 114 SDATSAAVRLARAYTGRDLVAR--CADH---------------------------PF--- 141
Query: 61 YRGEFSADD------------PQAAQKYA--------QAARNIMEAHRDNIATLICEPVF 100
FS DD P + + + E H IA +I EP
Sbjct: 142 ----FSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPAT 197
Query: 101 VVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFW----AFQTQGAVPDII 156
P G+L + HE G + I DE+ G R W A + G VPD+
Sbjct: 198 ADE----PQDGFLHEVRRLCHENGALFILDEMITGF-R-----WHMRGAQKLYGIVPDLS 247
Query: 157 TVGKPMGNGMPIGAVITSRKIAE 179
GK +GNG + A+ R+ E
Sbjct: 248 CFGKALGNGFAVSALAGKREYME 270
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 60.0 bits (145), Expect = 3e-10
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 56 PFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAV-VPPPGWLS 114
P PD Y E A + A A + + E I LI EP G + + P +L
Sbjct: 202 PSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLR 261
Query: 115 LMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVIT 173
+ G +IADEI G GR+G+ F A + G +PD++ + K + G +P+ AV+
Sbjct: 262 RARELCDAHGAFLIADEIATGFGRTGTLF-ACEQAGVMPDLLCLSKGLTGGFLPLSAVLA 320
Query: 174 SRKIAESLNCLDDNR 188
++++ ++ LDD+R
Sbjct: 321 TQQLYDAF--LDDSR 333
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 58.3 bits (142), Expect = 1e-09
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 7 ALQLARAYTGRQNIVVVDAAYHG--------TVNLLLDISPRAFMLSSEKKPWVHVIPFP 58
AL+LAR TGR NIV +HG T N + P +V P
Sbjct: 119 ALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGN--------SHKRQGAGVPLNNVTRMP 170
Query: 59 DTYRGEFSADDPQAA---QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSL 115
Y G F D A + ++ + D A +I E V G V WL
Sbjct: 171 --YDGYFGGDVDTLAYLEKLLEDSSSGV-----DLPAAVIVETVQGEGGINVASAEWLQR 223
Query: 116 MYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPM-GNGMPI 168
+ + ++I D+IQ G GR+G+ F++F+ G PDI+T+ K + G G+P+
Sbjct: 224 LAKLCRKHDILLIVDDIQAGCGRTGT-FFSFERAGITPDIVTLSKSISGYGLPM 276
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 57.3 bits (139), Expect = 2e-09
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVV-------IADEIQCGMGRSGS 141
D IA I EPV G V PP G Y I V+ IADE+ G GR GS
Sbjct: 219 DTIAAFIAEPVLGTGGIVPPPAG-------YWPAIQAVLKKYDILLIADEVVTGFGRLGS 271
Query: 142 HFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKI 177
F + G PD+ITV K + + P+ I K+
Sbjct: 272 MFGS-DHYGIEPDLITVAKGLTSAYAPLSGSIVGEKV 307
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 57.2 bits (138), Expect = 3e-09
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG 137
Q I+E +N+A + EP G + PP + + + ++ ADE+ G G
Sbjct: 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFG 269
Query: 138 RSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIAESL 181
R+G F A + G PD +++ K + +G +P+G ++ S++IAE+L
Sbjct: 270 RTGEWF-AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEAL 313
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 56.8 bits (137), Expect = 3e-09
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 69 DPQAAQKYAQAARNIMEAHRDN-IATLICEPVFVVHGA---VVPPPGWLSLMYDYIHEIG 124
PQ +Y ++ +E D +A +I EP+ V GA + + +
Sbjct: 182 SPQEISEYLRS----LELLIDETVAAIIIEPI--VQGAGGMRFHDVALIEGVRTLCDKHD 235
Query: 125 GVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIAESLN 182
++IADEI G GR+G F A G PDI+ VGK + G M A + + K+A+ ++
Sbjct: 236 ILLIADEIATGFGRTGELF-ATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLIS 293
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 55.5 bits (134), Expect = 8e-09
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHV 54
S A ++AL+++ Y ++ V + +YHG + + A + K +
Sbjct: 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDT 176
Query: 55 I--PFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAV-VPPPG 111
I P PD Y + +++ + H D IA +I EP+ G + + P
Sbjct: 177 IKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPV 236
Query: 112 WLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGA 170
+L L+ + G +I DEI G GR+G+ F A + G PD + + K + G +P+ A
Sbjct: 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRPDFLCLSKALTGGYLPLAA 295
Query: 171 VITSRKI 177
V+T+ +
Sbjct: 296 VLTTDTV 302
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 55.2 bits (133), Expect = 1e-08
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 65 FSADDPQAAQKYAQAARNIMEAHR------DNIATLICEPVFVVHGAVVPPPGWLSLMYD 118
F D P Q A + +A +IA I EP+ G P +L M
Sbjct: 187 FPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRA 246
Query: 119 YIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIA 178
E ++I DE+Q G+G +G+ WA+Q G PDI+ GK + ++ R++
Sbjct: 247 LCDEHDALLIFDEVQTGVGLTGT-AWAYQQLGVQPDIVAFGKK----TQVCGIMAGRRVD 301
Query: 179 E 179
E
Sbjct: 302 E 302
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 52.8 bits (127), Expect = 7e-08
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 12 RAYTGRQNIVVVDAAYHG-TVNLL----LDISPRAFMLSSEKKPWV---HVIPFPDTY-- 61
R ++ V + YHG T+ L + + A+ P + HV+ PD
Sbjct: 141 RGRGDKREFVCLANGYHGETIGALGVTDVALFKDAY------DPLIRHAHVVASPDARGA 194
Query: 62 -RGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDY 119
GE +AD A + R + IA LI EP V G + P +L +
Sbjct: 195 RPGETAAD---VAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRAL 251
Query: 120 IHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIA 178
G +IADEI G GR+G+ F+A + G PD + + K + G +P+ V++ I
Sbjct: 252 CDRYGVHLIADEIAVGCGRTGT-FFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIF 310
Query: 179 ESLNCLDDNR 188
+ D R
Sbjct: 311 AAFYDDDVTR 320
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 49.8 bits (119), Expect = 7e-07
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ 147
+ +A L+ EP+ G ++PP G+ + + + +I DEIQ G+GR+G A +
Sbjct: 186 PNTVAFLV-EPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK-LLAEE 243
Query: 148 TQGAVPDIITVGKPMGNGM-PIGAVITSRKI 177
+G D+ +GK + G P+ AV+++ ++
Sbjct: 244 HEGIEADVTLIGKALSGGFYPVSAVLSNSEV 274
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 40.2 bits (94), Expect = 8e-04
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Query: 50 PWVHVIPFPDTYR---GEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAV 106
W PFP + + E ++ + Q+ + ++++ +A +I EP+ G
Sbjct: 210 DWPQA-PFP-SLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDN 267
Query: 107 VPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG--AVPDIITVGKPMGN 164
P + + D + I DE+Q G+G +G FWA + PD++T K
Sbjct: 268 HASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGK-FWAHEHWNLDDPPDMVTFSKKFQT 326
Query: 165 G 165
Sbjct: 327 A 327
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 35.0 bits (81), Expect = 0.036
Identities = 26/194 (13%), Positives = 53/194 (27%), Gaps = 42/194 (21%)
Query: 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDT 60
+ + L R G ++V A + + + ++ V+ +P
Sbjct: 75 GANIEALIFLLRLNPGD--AILVPAPTYPSYIRIFRLAGGE------------VVRYPLY 120
Query: 61 YRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVH-------GAVVPPPGWL 113
+F D +A + V+H G V
Sbjct: 121 SSNDFHLD---------------FDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELE 165
Query: 114 SLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA--FQTQGAVPDII--TVGKPMG-NGMPI 168
L+ D E +++ DE G A ++ + K G G +
Sbjct: 166 KLL-DLAKEHNILLLVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRV 224
Query: 169 GAVITSRKIAESLN 182
G ++ + + L
Sbjct: 225 GYILGNAAVISQLR 238
>gnl|CDD|205044 pfam12725, DUF3810, Protein of unknown function (DUF3810). This
family of proteins is functionally uncharacterized. This
family of proteins is found in bacteria. Proteins in
this family are typically between 333 and 377 amino
acids in length. There is a conserved HEXXH sequence
motif that is characteristic of metallopeptidases. This
family may therefore belong to an as yet uncharacterized
family of peptidase enzymes.
Length = 317
Score = 29.5 bits (67), Expect = 1.8
Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 204 IFWCLILLSITYYLYRYTRRM-KEAKIIVANEGEYGNVLLFL 244
+ + L+++ + YL + +R+ K+ K + Y +VL FL
Sbjct: 28 LLYYLLIILLLRYLIKLRKRLKKKWKRFLLRVLAYLSVLYFL 69
>gnl|CDD|173010 PRK14544, PRK14544, nucleoside diphosphate kinase; Provisional.
Length = 183
Score = 29.0 bits (65), Expect = 2.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 58 PDTYRGEFSADDPQAAQKYAQAARNIMEA 86
P T RG++S D P A + + N++ A
Sbjct: 133 PGTIRGDYSIDSPDLAAEEGRVVYNLVHA 161
>gnl|CDD|214773 smart00672, CAP10, Putative lipopolysaccharide-modifying enzyme.
Length = 256
Score = 28.5 bits (64), Expect = 3.7
Identities = 8/50 (16%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 45 SSEKKPWVHVIPFPDTYRG-------EFSADDPQAAQKYAQAARNIMEAH 87
S +PWVH P ++ + + AQ+ + ++ +
Sbjct: 183 SRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQN 232
>gnl|CDD|235876 PRK06849, PRK06849, hypothetical protein; Provisional.
Length = 389
Score = 28.5 bits (64), Expect = 4.1
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 30/98 (30%)
Query: 7 ALQLARAY--TGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGE 64
AL+LAR + G I+ Y + F + + + IP P
Sbjct: 17 ALELARLFHNAGHTVILADSLKYPLS----------RFSRAVDG---FYTIPSPR----- 58
Query: 65 FSADDPQAAQKYAQAARNIMEAHRDNIATLI--CEPVF 100
DP A Y QA +I++ R+NI LI CE VF
Sbjct: 59 ---WDPDA---YIQALLSIVQ--RENIDLLIPTCEEVF 88
>gnl|CDD|237217 PRK12822, PRK12822, phospho-2-dehydro-3-deoxyheptonate aldolase;
Provisional.
Length = 356
Score = 28.3 bits (63), Expect = 4.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 63 GEFSADDPQAAQKYAQAARNIMEAHRDNI 91
G S DPQAA +YA+ + + D +
Sbjct: 59 GPCSIHDPQAALEYAKRLAVLQHQYLDQL 87
>gnl|CDD|217936 pfam04161, Arv1, Arv1-like family. Arv1 is a transmembrane protein
with potential zinc-binding motifs. ARV1 is a novel
mediator of eukaryotic sterol homeostasis.
Length = 194
Score = 27.3 bits (61), Expect = 7.6
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 201 NLHIFWCLILLSITYYLYRYTRRMKEAKII--VANEGEYGNVLLFLPAMCLTTENVLFIV 258
L + L++L Y +R + + + V ++ Y L FL L ENVL +
Sbjct: 70 RLWRLFLLLILFEVYLTWRREEKKSQHSLTRNVLSQSPYLQYLFFLA--YLLLENVLLHI 127
Query: 259 STL 261
ST
Sbjct: 128 STA 130
>gnl|CDD|131755 TIGR02708, L_lactate_ox, L-lactate oxidase. Members of this
protein oxidize L-lactate to pyruvate, reducing
molecular oxygen to hydrogen peroxide. The enzyme is
known in Aerococcus viridans, Streptococcus iniae, and
some strains of Streptococcus pyogenes where it appears
to contribute to virulence [Energy metabolism, Other].
Length = 367
Score = 27.6 bits (61), Expect = 8.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 138 RSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLN 182
R G H + GA D++ +G+P+ G+ +G +R++ E LN
Sbjct: 293 RRGQHVFKALASGA--DLVALGRPVIYGLALGGSQGARQVFEYLN 335
>gnl|CDD|165588 PHA03344, PHA03344, US22 family homolog; Provisional.
Length = 672
Score = 27.7 bits (61), Expect = 8.6
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 62 RGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPP 110
G F D ++ + AA NI E ++ CEP + GA + P
Sbjct: 283 EGRFFLYDAESDGLFL-AAENIDELAHKGLS--ACEPAYRDGGATISLP 328
>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde
dehydrogenase-like. NADP+-dependent,
p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH)
which catalyzes oxidation of p-hydroxybenzaldehyde to
p-hydroxybenzoic acid and other related sequences are
included in this CD.
Length = 465
Score = 27.7 bits (62), Expect = 8.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 64 EFSADDPQAAQKYAQAARNIMEAHRDNIATLI 95
E++A PQ + + A I+E RD I +
Sbjct: 47 EWAATLPQERAEILEKAAQILEERRDEIVEWL 78
>gnl|CDD|235514 PRK05580, PRK05580, primosome assembly protein PriA; Validated.
Length = 679
Score = 27.4 bits (62), Expect = 9.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 65 FSADDPQAAQKYAQAARNIMEAH 87
SA D + A+K+AQ ++
Sbjct: 589 ASAKDEEKAEKFAQQLAALLPNL 611
>gnl|CDD|219625 pfam07895, DUF1673, Protein of unknown function (DUF1673). This
family contains hypothetical proteins of unknown
function expressed by two archaeal species.
Length = 204
Score = 26.9 bits (60), Expect = 9.9
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 198 LGINLHIFWCLILLSITYYLYRYTRRMKE----AKIIV 231
LGINL + LS+ YL+ + ++M AK V
Sbjct: 77 LGINLLFLLAGLFLSLLLYLFTWKKQMIRYDALAKKPV 114
>gnl|CDD|236821 PRK11017, codB, cytosine permease; Provisional.
Length = 404
Score = 27.2 bits (61), Expect = 10.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 111 GWLSLMYDYIHEIGGVVIAD 130
GWL+L+ I +GGV+IAD
Sbjct: 315 GWLTLLGSAIPPVGGVIIAD 334
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.324 0.139 0.426
Gapped
Lambda K H
0.267 0.0675 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 14,869,983
Number of extensions: 1451401
Number of successful extensions: 1786
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1623
Number of HSP's successfully gapped: 129
Length of query: 284
Length of database: 10,937,602
Length adjustment: 96
Effective length of query: 188
Effective length of database: 6,679,618
Effective search space: 1255768184
Effective search space used: 1255768184
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.2 bits)