BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11785
(308 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2KMO|A Chain A, Solution Structure Of Native Leech-Derived Tryptase
Inhibitor, Ldti
pdb|2KMP|A Chain A, Solution Structure Of Intermeidate Iia Of Leeck-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMQ|A Chain A, Solution Structure Of Intermediate Iib Of Leech-Derived
Tryptase Inhibitor, Ldti.
pdb|2KMR|A Chain A, Solution Structure Of Intermediate Iic Of Leech-Derived
Tryptase Inhibitor, Ldti
Length = 44
Score = 33.5 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQNIS 290
C C P+CG DGRTY ++C A C +S
Sbjct: 4 CACP-KILKPVCGSDGRTYANSCIARCNGVS 33
>pdb|1LDT|L Chain L, Complex Of Leech-Derived Tryptase Inhibitor With Porcine
Trypsin
pdb|1AN1|I Chain I, Leech-Derived Tryptase InhibitorTRYPSIN COMPLEX
Length = 46
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 267 FNPICGGDGRTYFSACHAGCQNIS 290
P+CG DGRTY ++C A C +S
Sbjct: 10 LKPVCGSDGRTYANSCIARCNGVS 33
>pdb|1TBR|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBR|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|R Chain R, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
pdb|1TBQ|S Chain S, Crystal Structure Of Insect Derived Double Domain Kazal
Inhibitor Rhodniin In Complex With Thrombin
Length = 103
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 261 ECDHSKFNPICGGDGRTYFSACHAGCQNISSIDG 294
ECD ++ P+CG D TY + C C +ISS G
Sbjct: 59 ECDGDEYKPVCGSDDITYDNNCRLECASISSSPG 92
>pdb|2ERW|A Chain A, Crystal Structure Of Infestin 4, A Factor Xiia Inhibitor
Length = 56
Score = 31.2 bits (69), Expect = 0.70, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQNISSIDG 294
C C + P+CG DG+TY + C C + + G
Sbjct: 6 CAC-FRNYVPVCGSDGKTYGNPCMLNCAAQTKVPG 39
>pdb|1IY6|A Chain A, Solution Structure Of Omsvp3 Variant, P14cN39C
Length = 54
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
C+ C C ++ P+CG D +TY + C+ C + S
Sbjct: 6 CSEYPKCACT-MEYRPLCGSDNKTYGNKCNFCCAVVES 42
>pdb|1Y1C|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor Analogue
Length = 48
Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 266 KFNPICGGDGRTYFSACHAGCQNISS 291
+++P+CG DG TY +AC C + S
Sbjct: 11 QYDPVCGSDGITYGNACMLLCASARS 36
>pdb|1Y1B|A Chain A, Solution Structure Of Anemonia Elastase Inhibitor
Length = 48
Score = 28.5 bits (62), Expect = 4.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 266 KFNPICGGDGRTYFSACH---AGCQNISSID 293
+++P+CG DG TY +AC A C++ + I+
Sbjct: 11 QYDPVCGSDGITYGNACMLLGASCRSDTPIE 41
>pdb|1KMA|A Chain A, Nmr Structure Of The Domain-I Of The Kazal-Type Thrombin
Inhibitor Dipetalin
Length = 55
Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 260 CECDHSKFNPICGGDGRTYFSACHAGC 286
CEC + + +CG DG TY + C C
Sbjct: 6 CECPRA-LHRVCGSDGNTYSNPCMLTC 31
>pdb|2LEO|A Chain A, Solution Structure Of Esophageal Cancer-Related Gene 2
Length = 66
Score = 28.1 bits (61), Expect = 7.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 269 PICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
P+CG D TY + CH +++ S +G+VQ L
Sbjct: 32 PVCGSDYITYGNECHLCTESLKS-NGRVQFL 61
>pdb|1BUS|A Chain A, Solution Conformation Of Proteinase Inhibitor Iia From
Bull Seminal Plasma By 1h Nuclear Magnetic Resonance And
Distance Geometry
pdb|2BUS|A Chain A, Solution Conformation Of Proteinase Inhibitor Iia From
Bull Seminal Plasma By 1h Nuclear Magnetic Resonance And
Distance Geometry
Length = 57
Score = 27.7 bits (60), Expect = 9.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 268 NPICGGDGRTYFSACHAGCQNISSIDGKV 296
NP CG +G TY + C A C+ + GK+
Sbjct: 22 NPHCGSNGETYGNKC-AFCKAVMKSGGKI 49
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,123,296
Number of Sequences: 62578
Number of extensions: 293651
Number of successful extensions: 523
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 23
length of query: 308
length of database: 14,973,337
effective HSP length: 99
effective length of query: 209
effective length of database: 8,778,115
effective search space: 1834626035
effective search space used: 1834626035
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)