Query psy11785
Match_columns 308
No_of_seqs 284 out of 1621
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 18:53:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3626|consensus 100.0 1.8E-74 3.9E-79 563.0 23.4 304 1-306 249-564 (735)
2 TIGR00805 oat sodium-independe 100.0 3.8E-60 8.2E-65 470.9 24.1 303 1-306 184-498 (633)
3 PF03137 OATP: Organic Anion T 100.0 5.4E-54 1.2E-58 418.0 0.2 262 1-264 153-429 (539)
4 cd01330 KAZAL_SLC21 The kazal- 99.8 5.5E-22 1.2E-26 131.9 3.5 54 250-306 1-54 (54)
5 KOG2532|consensus 99.7 2.1E-16 4.5E-21 151.9 11.6 214 2-236 141-358 (466)
6 KOG1330|consensus 99.7 1.2E-17 2.7E-22 155.7 1.8 177 1-204 133-311 (493)
7 TIGR00894 2A0114euk Na(+)-depe 99.7 3.3E-16 7.1E-21 150.8 11.6 185 1-206 143-327 (465)
8 PRK09556 uhpT sugar phosphate 99.6 6.8E-16 1.5E-20 149.0 10.3 189 2-207 135-325 (467)
9 TIGR00893 2A0114 d-galactonate 99.6 4.9E-15 1.1E-19 137.2 12.7 187 2-207 95-282 (399)
10 COG2271 UhpC Sugar phosphate p 99.6 6.7E-15 1.5E-19 136.3 11.5 186 5-210 133-322 (448)
11 PRK11663 regulatory protein Uh 99.6 2.9E-14 6.2E-19 136.4 15.3 181 3-206 125-309 (434)
12 TIGR00881 2A0104 phosphoglycer 99.6 1.9E-14 4.2E-19 133.0 12.8 185 2-206 96-282 (379)
13 TIGR00712 glpT glycerol-3-phos 99.6 8.6E-14 1.9E-18 133.2 16.2 184 3-207 132-318 (438)
14 TIGR00710 efflux_Bcr_CflA drug 99.5 9.2E-14 2E-18 129.5 13.6 166 2-206 106-272 (385)
15 COG2814 AraJ Arabinose efflux 99.5 1.3E-13 2.8E-18 128.5 13.1 161 3-206 115-276 (394)
16 TIGR00903 2A0129 major facilit 99.5 2.3E-13 4.9E-18 127.7 14.2 157 7-206 96-253 (368)
17 PRK10406 alpha-ketoglutarate t 99.5 2.1E-13 4.5E-18 130.3 14.2 173 1-206 136-309 (432)
18 TIGR00901 2A0125 AmpG-related 99.5 1.7E-13 3.7E-18 127.1 12.1 172 7-206 101-275 (356)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.5E-13 3.2E-18 130.7 11.7 192 2-207 109-310 (412)
20 PRK03545 putative arabinose tr 99.5 3.4E-13 7.4E-18 126.9 13.7 160 3-206 111-271 (390)
21 PRK11102 bicyclomycin/multidru 99.5 3E-13 6.5E-18 126.1 12.5 167 3-206 93-260 (377)
22 PRK14995 methyl viologen resis 99.5 3.8E-13 8.2E-18 130.9 13.0 184 2-206 107-325 (495)
23 COG2223 NarK Nitrate/nitrite t 99.5 6.1E-13 1.3E-17 123.3 13.3 166 4-206 119-284 (417)
24 PRK11195 lysophospholipid tran 99.5 3.6E-13 7.7E-18 127.3 11.7 171 2-206 101-271 (393)
25 TIGR00900 2A0121 H+ Antiporter 99.5 4E-13 8.8E-18 123.7 11.8 171 3-206 106-277 (365)
26 PRK11273 glpT sn-glycerol-3-ph 99.5 1.1E-12 2.4E-17 126.1 15.1 182 3-206 134-319 (452)
27 PRK11902 ampG muropeptide tran 99.5 6.3E-13 1.4E-17 125.7 13.3 167 5-206 110-276 (402)
28 TIGR00711 efflux_EmrB drug res 99.5 3.2E-13 7E-18 130.1 11.2 186 2-206 103-321 (485)
29 TIGR00886 2A0108 nitrite extru 99.5 1.1E-12 2.3E-17 121.7 14.1 183 6-206 107-291 (366)
30 PRK11010 ampG muropeptide tran 99.5 8.2E-13 1.8E-17 128.5 13.5 168 4-206 122-289 (491)
31 PRK15402 multidrug efflux syst 99.4 9.8E-13 2.1E-17 124.3 13.3 166 3-206 115-281 (406)
32 PLN00028 nitrate transmembrane 99.4 1.5E-12 3.2E-17 126.2 13.9 176 9-206 143-318 (476)
33 PF07690 MFS_1: Major Facilita 99.4 1.5E-13 3.3E-18 126.0 6.7 174 2-206 98-273 (352)
34 KOG2533|consensus 99.4 3E-13 6.5E-18 130.7 8.6 186 2-204 147-337 (495)
35 PRK15403 multidrug efflux syst 99.4 1.3E-12 2.8E-17 124.3 12.8 161 4-202 119-280 (413)
36 TIGR00897 2A0118 polyol permea 99.4 3.7E-12 7.9E-17 120.6 15.2 168 2-206 118-287 (402)
37 PRK09705 cynX putative cyanate 99.4 4E-12 8.7E-17 120.0 15.0 162 1-206 109-270 (393)
38 PRK06814 acylglycerophosphoeth 99.4 1.7E-12 3.7E-17 138.0 13.8 170 2-205 121-290 (1140)
39 PRK10473 multidrug efflux syst 99.4 2.8E-12 6.2E-17 120.5 13.6 165 2-206 104-269 (392)
40 TIGR00883 2A0106 metabolite-pr 99.4 3.7E-12 7.9E-17 118.4 13.5 175 2-206 109-285 (394)
41 PRK10642 proline/glycine betai 99.4 2.7E-12 5.8E-17 124.8 12.3 186 1-207 130-317 (490)
42 PRK10213 nepI ribonucleoside t 99.4 6.2E-12 1.4E-16 118.8 14.2 158 2-203 121-279 (394)
43 PRK10133 L-fucose transporter; 99.4 5.2E-12 1.1E-16 121.1 13.7 187 2-206 130-325 (438)
44 TIGR01272 gluP glucose/galacto 99.4 5.7E-12 1.2E-16 115.5 13.2 194 2-218 23-218 (310)
45 PRK10091 MFS transport protein 99.4 8.8E-12 1.9E-16 117.1 14.8 160 3-206 105-265 (382)
46 PRK03699 putative transporter; 99.4 1.2E-11 2.5E-16 116.7 15.3 163 3-206 109-271 (394)
47 PRK10489 enterobactin exporter 99.4 5.7E-12 1.2E-16 119.6 13.2 161 6-204 127-287 (417)
48 TIGR00902 2A0127 phenyl propri 99.4 4.3E-12 9.4E-17 119.2 11.8 176 3-221 108-283 (382)
49 PRK09952 shikimate transporter 99.4 9.1E-12 2E-16 119.4 14.1 179 1-206 137-316 (438)
50 PRK11128 putative 3-phenylprop 99.4 6E-12 1.3E-16 118.2 11.7 175 3-220 108-282 (382)
51 TIGR00892 2A0113 monocarboxyla 99.3 8.8E-12 1.9E-16 120.1 13.0 184 2-206 121-306 (455)
52 PRK11043 putative transporter; 99.3 1.6E-11 3.4E-16 115.9 14.3 160 4-206 109-268 (401)
53 TIGR00895 2A0115 benzoate tran 99.3 7.6E-12 1.7E-16 116.5 11.5 185 2-206 118-315 (398)
54 TIGR00891 2A0112 putative sial 99.3 8.3E-12 1.8E-16 116.8 11.8 188 2-206 113-304 (405)
55 PRK08633 2-acyl-glycerophospho 99.3 1.5E-11 3.3E-16 130.7 14.8 183 2-206 116-299 (1146)
56 TIGR00896 CynX cyanate transpo 99.3 2.8E-11 6.1E-16 112.2 14.4 161 4-206 102-262 (355)
57 PRK15075 citrate-proton sympor 99.3 2.9E-11 6.4E-16 115.6 14.5 174 2-206 130-304 (434)
58 PRK12307 putative sialic acid 99.3 1.5E-11 3.2E-16 116.8 11.9 175 2-206 119-296 (426)
59 PRK11551 putative 3-hydroxyphe 99.3 2.4E-11 5.3E-16 114.6 12.4 169 2-206 116-285 (406)
60 TIGR00890 2A0111 Oxalate/Forma 99.3 3.6E-11 7.9E-16 111.0 13.0 166 3-206 105-270 (377)
61 TIGR00899 2A0120 sugar efflux 99.3 5.2E-11 1.1E-15 110.6 13.6 161 4-206 102-265 (375)
62 PRK10504 putative transporter; 99.3 3.3E-11 7.1E-16 116.2 11.6 182 2-206 111-327 (471)
63 TIGR02718 sider_RhtX_FptX side 99.2 1.8E-10 3.9E-15 108.4 14.5 152 15-206 123-274 (390)
64 PRK15011 sugar efflux transpor 99.2 1.4E-10 3.1E-15 109.4 13.5 158 5-206 121-282 (393)
65 PRK11652 emrD multidrug resist 99.2 1.6E-10 3.5E-15 108.7 13.8 160 4-204 111-271 (394)
66 PRK11646 multidrug resistance 99.2 1.9E-10 4.2E-15 108.9 13.3 160 3-205 113-273 (400)
67 TIGR00879 SP MFS transporter, 99.2 4.7E-11 1E-15 113.6 9.0 186 1-206 139-349 (481)
68 TIGR00887 2A0109 phosphate:H+ 99.2 1.5E-10 3.2E-15 112.9 12.0 204 2-208 128-367 (502)
69 TIGR00885 fucP L-fucose:H+ sym 99.2 2.7E-10 6E-15 108.3 13.5 183 2-206 107-299 (410)
70 PRK03633 putative MFS family t 99.2 1.7E-10 3.7E-15 108.3 11.9 158 3-206 108-265 (381)
71 PRK15034 nitrate/nitrite trans 99.2 4.3E-10 9.3E-15 108.0 14.3 178 4-216 142-324 (462)
72 PRK10077 xylE D-xylose transpo 99.2 1E-10 2.2E-15 112.8 9.6 85 2-96 133-217 (479)
73 cd06174 MFS The Major Facilita 99.1 2.2E-09 4.8E-14 97.8 13.6 143 2-207 100-242 (352)
74 PRK09874 drug efflux system pr 99.0 3.7E-09 8E-14 99.5 14.4 161 6-206 123-288 (408)
75 PRK03893 putative sialic acid 99.0 1.9E-09 4.1E-14 104.4 11.1 49 3-51 122-170 (496)
76 PRK09528 lacY galactoside perm 99.0 2.3E-09 4.9E-14 102.0 11.2 154 20-206 136-292 (420)
77 TIGR00882 2A0105 oligosacchari 99.0 4.7E-09 1E-13 98.9 13.0 166 6-206 116-284 (396)
78 TIGR00792 gph sugar (Glycoside 99.0 3.2E-09 6.9E-14 101.0 11.5 174 11-216 121-295 (437)
79 TIGR01299 synapt_SV2 synaptic 99.0 1.8E-09 4E-14 109.3 9.2 90 2-96 268-357 (742)
80 COG0738 FucP Fucose permease [ 98.9 2.4E-08 5.2E-13 92.6 14.9 187 2-214 117-308 (422)
81 PRK10054 putative transporter; 98.9 2.4E-09 5.3E-14 101.2 8.8 160 5-206 112-274 (395)
82 PRK05122 major facilitator sup 98.9 1.8E-08 3.9E-13 94.9 13.8 155 2-206 125-279 (399)
83 TIGR00898 2A0119 cation transp 98.9 4.6E-09 1E-13 102.1 9.8 178 1-206 192-385 (505)
84 PRK12382 putative transporter; 98.9 2.3E-08 5.1E-13 93.9 13.4 50 2-51 125-174 (392)
85 cd00104 KAZAL_FS Kazal type se 98.9 7.6E-10 1.6E-14 70.0 2.1 28 262-290 1-28 (41)
86 PF05977 MFS_3: Transmembrane 98.9 1.4E-08 3E-13 99.5 11.3 167 3-205 117-283 (524)
87 COG2807 CynX Cyanate permease 98.8 1.2E-07 2.7E-12 86.9 13.3 171 8-222 118-288 (395)
88 PRK10207 dipeptide/tripeptide 98.8 1.3E-07 2.7E-12 92.2 13.6 78 1-96 117-196 (489)
89 KOG3764|consensus 98.7 1.2E-08 2.6E-13 94.3 4.6 163 1-204 171-334 (464)
90 PF13347 MFS_2: MFS/sugar tran 98.7 3.7E-07 8E-12 87.2 13.8 177 11-220 125-302 (428)
91 KOG2504|consensus 98.7 2.2E-07 4.8E-12 90.6 12.2 200 1-221 147-378 (509)
92 PF11700 ATG22: Vacuole efflux 98.7 4.5E-07 9.7E-12 87.9 14.2 186 11-218 148-359 (477)
93 KOG2563|consensus 98.7 5.2E-07 1.1E-11 84.8 13.9 178 15-221 166-345 (480)
94 KOG2615|consensus 98.6 1.8E-07 3.9E-12 86.2 9.9 174 7-204 138-322 (451)
95 PF03209 PUCC: PUCC protein; 98.6 1.2E-06 2.5E-11 82.0 14.2 187 5-225 105-292 (403)
96 TIGR00889 2A0110 nucleoside tr 98.5 1E-06 2.2E-11 84.1 11.5 83 132-218 201-291 (418)
97 PRK09848 glucuronide transport 98.4 1.1E-06 2.4E-11 84.4 9.8 86 128-216 217-302 (448)
98 cd01327 KAZAL_PSTI Kazal-type 98.4 1.4E-07 3.1E-12 60.6 2.4 28 260-289 3-30 (45)
99 PRK09669 putative symporter Ya 98.4 3.5E-06 7.6E-11 80.8 12.0 162 12-206 132-294 (444)
100 PRK11462 putative transporter; 98.4 9E-06 1.9E-10 78.6 14.6 153 20-206 141-293 (460)
101 TIGR00924 yjdL_sub1_fam amino 98.4 1.1E-05 2.3E-10 78.4 15.2 79 1-97 114-195 (475)
102 PRK10429 melibiose:sodium symp 98.3 9E-06 1.9E-10 78.8 12.3 168 11-206 128-296 (473)
103 KOG0569|consensus 98.3 3.7E-06 8.1E-11 81.0 9.1 185 7-209 134-338 (485)
104 TIGR00806 rfc RFC reduced fola 98.2 1.7E-05 3.6E-10 76.2 12.7 48 1-49 127-174 (511)
105 KOG0254|consensus 98.2 4.3E-06 9.3E-11 81.9 7.8 198 2-225 155-376 (513)
106 PF07648 Kazal_2: Kazal-type s 98.2 4.3E-07 9.4E-12 57.4 0.4 30 262-291 1-30 (42)
107 TIGR01301 GPH_sucrose GPH fami 98.1 9.4E-05 2E-09 71.7 14.8 156 7-174 132-294 (477)
108 COG2211 MelB Na+/melibiose sym 98.1 6E-05 1.3E-09 72.3 12.5 179 20-232 144-323 (467)
109 PF00083 Sugar_tr: Sugar (and 98.0 4.2E-08 9E-13 93.9 -9.4 80 2-96 115-194 (451)
110 PRK09584 tppB putative tripept 98.0 7.8E-05 1.7E-09 72.9 13.4 66 2-85 125-192 (500)
111 COG2270 Permeases of the major 98.0 5.1E-05 1.1E-09 71.2 9.8 180 10-206 136-318 (438)
112 KOG2816|consensus 97.9 2.1E-05 4.5E-10 75.9 7.1 193 4-223 127-323 (463)
113 PF06609 TRI12: Fungal trichot 97.9 0.00011 2.4E-09 72.8 11.6 72 132-204 302-377 (599)
114 PF00050 Kazal_1: Kazal-type s 97.9 2.7E-06 5.8E-11 55.5 0.1 26 262-289 8-33 (48)
115 smart00280 KAZAL Kazal type se 97.9 6.2E-06 1.3E-10 53.3 1.6 25 262-287 6-30 (46)
116 TIGR00788 fbt folate/biopterin 97.9 1.2E-05 2.5E-10 78.1 4.1 187 8-218 139-328 (468)
117 KOG0252|consensus 97.8 3.9E-05 8.4E-10 72.7 6.2 204 1-213 156-385 (538)
118 PF03825 Nuc_H_symport: Nucleo 97.8 0.00025 5.4E-09 67.4 11.2 89 131-222 199-287 (400)
119 PRK09528 lacY galactoside perm 97.7 0.00012 2.5E-09 69.7 8.0 73 134-207 5-77 (420)
120 KOG4686|consensus 97.7 0.00039 8.4E-09 62.4 10.0 181 2-207 149-331 (459)
121 TIGR00882 2A0105 oligosacchari 97.6 0.00025 5.3E-09 66.8 7.9 68 138-206 1-68 (396)
122 KOG0255|consensus 97.5 0.00094 2E-08 65.4 11.1 48 2-50 184-231 (521)
123 TIGR00880 2_A_01_02 Multidrug 97.4 0.00017 3.7E-09 56.3 4.4 48 4-51 66-113 (141)
124 TIGR00924 yjdL_sub1_fam amino 97.4 0.00027 5.9E-09 68.7 6.4 75 141-218 12-89 (475)
125 PRK15462 dipeptide/tripeptide 97.4 0.0025 5.5E-08 62.1 12.9 67 2-86 113-181 (493)
126 PF01306 LacY_symp: LacY proto 97.4 0.0055 1.2E-07 58.2 14.5 89 130-222 211-303 (412)
127 TIGR00769 AAA ADP/ATP carrier 97.3 0.0083 1.8E-07 58.2 15.2 42 9-50 149-190 (472)
128 PRK15462 dipeptide/tripeptide 97.3 0.00064 1.4E-08 66.2 7.4 66 140-206 10-76 (493)
129 PRK10054 putative transporter; 97.3 0.00086 1.9E-08 63.4 8.0 65 141-206 9-73 (395)
130 PRK09584 tppB putative tripept 97.2 0.00074 1.6E-08 66.1 7.1 73 133-206 14-88 (500)
131 TIGR00886 2A0108 nitrite extru 97.2 0.00092 2E-08 61.7 7.4 65 141-206 3-67 (366)
132 TIGR01299 synapt_SV2 synaptic 97.2 0.00026 5.5E-09 72.3 3.7 74 4-96 663-736 (742)
133 PRK05122 major facilitator sup 97.2 0.0014 3E-08 61.6 8.0 67 139-206 15-81 (399)
134 PF01306 LacY_symp: LacY proto 97.1 0.001 2.2E-08 63.1 6.7 71 136-207 4-74 (412)
135 PRK12382 putative transporter; 97.1 0.0012 2.6E-08 62.0 7.1 67 139-206 15-81 (392)
136 TIGR00889 2A0110 nucleoside tr 97.0 0.00058 1.3E-08 65.1 3.9 48 5-52 324-372 (418)
137 PF06963 FPN1: Ferroportin1 (F 97.0 0.0049 1.1E-07 59.0 10.1 99 132-235 252-350 (432)
138 KOG2325|consensus 96.8 0.013 2.9E-07 56.6 11.2 44 7-50 147-190 (488)
139 PF12832 MFS_1_like: MFS_1 lik 96.8 0.0026 5.6E-08 45.8 4.9 58 147-206 8-65 (77)
140 PRK10489 enterobactin exporter 96.7 0.0056 1.2E-07 58.0 7.6 75 131-207 9-83 (417)
141 PF03825 Nuc_H_symport: Nucleo 96.6 0.0043 9.2E-08 59.0 6.4 73 6-90 318-391 (400)
142 KOG0253|consensus 96.6 0.056 1.2E-06 50.6 13.2 74 3-96 180-253 (528)
143 PRK10207 dipeptide/tripeptide 96.6 0.0069 1.5E-07 59.1 7.5 66 140-206 15-81 (489)
144 PF03219 TLC: TLC ATP/ADP tran 96.5 0.058 1.3E-06 52.6 13.5 40 11-50 166-205 (491)
145 cd01328 FSL_SPARC Follistatin- 96.5 0.0015 3.2E-08 47.8 1.9 28 254-283 25-52 (86)
146 PRK11043 putative transporter; 96.5 0.0091 2E-07 56.1 7.8 60 146-206 10-71 (401)
147 PRK09874 drug efflux system pr 96.5 0.0025 5.4E-08 59.8 3.9 71 3-91 325-395 (408)
148 PRK03633 putative MFS family t 96.5 0.0039 8.5E-08 58.3 4.9 69 4-90 300-368 (381)
149 TIGR00712 glpT glycerol-3-phos 96.4 0.0075 1.6E-07 57.7 6.9 73 130-206 19-91 (438)
150 TIGR00892 2A0113 monocarboxyla 96.4 0.0004 8.7E-09 67.0 -2.0 49 3-51 347-395 (455)
151 PRK11646 multidrug resistance 96.4 0.01 2.2E-07 56.1 7.5 74 144-220 15-88 (400)
152 PRK15011 sugar efflux transpor 96.4 0.011 2.4E-07 55.6 7.6 69 138-207 14-82 (393)
153 PRK11663 regulatory protein Uh 96.3 0.0089 1.9E-07 57.1 6.5 66 139-206 23-88 (434)
154 PRK03699 putative transporter; 96.3 0.0091 2E-07 56.2 6.5 65 140-206 8-72 (394)
155 cd06174 MFS The Major Facilita 96.3 0.0045 9.9E-08 56.0 4.1 49 2-50 278-326 (352)
156 TIGR00879 SP MFS transporter, 96.2 0.0066 1.4E-07 57.5 4.9 45 7-51 401-445 (481)
157 PRK10504 putative transporter; 96.2 0.013 2.8E-07 56.4 6.9 65 140-206 11-75 (471)
158 TIGR00890 2A0111 Oxalate/Forma 96.1 0.0059 1.3E-07 56.0 4.0 48 4-51 310-357 (377)
159 PRK15034 nitrate/nitrite trans 96.1 0.019 4.1E-07 55.6 7.4 69 138-207 33-101 (462)
160 PTZ00207 hypothetical protein; 96.0 0.0072 1.6E-07 60.2 4.5 76 2-98 133-209 (591)
161 PRK11551 putative 3-hydroxyphe 96.0 0.0071 1.5E-07 56.8 4.3 46 6-51 325-370 (406)
162 PLN00028 nitrate transmembrane 96.0 0.025 5.5E-07 54.9 8.1 54 152-207 49-102 (476)
163 PRK11652 emrD multidrug resist 96.0 0.02 4.3E-07 53.7 7.1 53 152-206 21-73 (394)
164 PRK09848 glucuronide transport 95.9 0.02 4.3E-07 54.9 7.1 63 143-206 12-74 (448)
165 TIGR00893 2A0114 d-galactonate 95.9 0.012 2.7E-07 54.0 5.4 46 6-51 328-373 (399)
166 TIGR00891 2A0112 putative sial 95.9 0.026 5.5E-07 52.5 7.4 65 140-206 13-77 (405)
167 TIGR00898 2A0119 cation transp 95.9 0.0099 2.2E-07 57.7 4.7 71 6-96 427-497 (505)
168 PRK11273 glpT sn-glycerol-3-ph 95.8 0.035 7.6E-07 53.3 8.2 47 157-206 47-93 (452)
169 PF05631 DUF791: Protein of un 95.8 0.21 4.6E-06 46.4 12.6 92 127-223 232-324 (354)
170 TIGR00897 2A0118 polyol permea 95.7 0.026 5.7E-07 53.2 6.6 62 143-206 17-78 (402)
171 TIGR00926 2A1704 Peptide:H+ sy 95.7 0.34 7.3E-06 49.1 14.8 85 1-96 97-184 (654)
172 COG3104 PTR2 Dipeptide/tripept 95.6 0.071 1.5E-06 51.5 9.2 81 1-99 129-211 (498)
173 TIGR00885 fucP L-fucose:H+ sym 95.6 0.038 8.3E-07 52.5 7.5 46 159-206 23-68 (410)
174 PRK09705 cynX putative cyanate 95.6 0.017 3.6E-07 54.5 5.0 48 4-51 307-355 (393)
175 PF07690 MFS_1: Major Facilita 95.6 0.019 4.1E-07 52.3 5.0 73 146-221 3-75 (352)
176 TIGR02332 HpaX 4-hydroxyphenyl 95.6 0.029 6.4E-07 53.2 6.4 65 141-207 10-74 (412)
177 PRK11195 lysophospholipid tran 95.5 0.047 1E-06 51.5 7.7 76 138-217 2-77 (393)
178 PRK03893 putative sialic acid 95.5 0.031 6.8E-07 54.0 6.6 45 7-51 384-428 (496)
179 TIGR00881 2A0104 phosphoglycer 95.5 0.027 5.9E-07 51.6 5.8 55 150-206 6-60 (379)
180 PRK10133 L-fucose transporter; 95.5 0.051 1.1E-06 52.2 7.7 69 149-221 36-104 (438)
181 TIGR00899 2A0120 sugar efflux 95.4 0.032 6.9E-07 51.5 5.9 60 147-207 5-64 (375)
182 PRK10091 MFS transport protein 95.4 0.043 9.4E-07 51.3 6.8 73 140-216 4-76 (382)
183 PRK10473 multidrug efflux syst 95.2 0.065 1.4E-06 50.2 7.5 64 141-206 5-68 (392)
184 TIGR00710 efflux_Bcr_CflA drug 95.1 0.068 1.5E-06 49.4 7.2 52 153-206 19-70 (385)
185 PRK09669 putative symporter Ya 95.1 0.046 1E-06 52.3 6.2 61 144-205 14-74 (444)
186 PRK12307 putative sialic acid 95.1 0.069 1.5E-06 50.5 7.3 63 142-206 21-83 (426)
187 TIGR00792 gph sugar (Glycoside 95.0 0.042 9E-07 52.1 5.7 56 150-206 10-65 (437)
188 PF03092 BT1: BT1 family; Int 95.0 0.028 6E-07 54.1 4.4 31 21-51 120-150 (433)
189 TIGR00805 oat sodium-independe 95.0 0.061 1.3E-06 54.3 6.9 73 149-224 42-114 (633)
190 PRK15402 multidrug efflux syst 94.9 0.077 1.7E-06 49.9 7.2 50 155-206 29-78 (406)
191 KOG3098|consensus 94.9 0.59 1.3E-05 45.2 13.1 41 1-41 114-154 (461)
192 PRK03545 putative arabinose tr 94.8 0.054 1.2E-06 50.8 5.7 42 10-52 315-356 (390)
193 PRK10642 proline/glycine betai 94.8 0.054 1.2E-06 52.7 5.7 42 9-50 362-403 (490)
194 PRK10429 melibiose:sodium symp 94.7 0.074 1.6E-06 51.5 6.6 60 143-203 10-69 (473)
195 PF05977 MFS_3: Transmembrane 94.7 0.11 2.4E-06 51.2 7.8 76 134-213 5-80 (524)
196 PF01770 Folate_carrier: Reduc 94.7 3.4 7.4E-05 39.4 17.4 171 11-199 115-308 (412)
197 TIGR00895 2A0115 benzoate tran 94.7 0.066 1.4E-06 49.5 5.9 56 149-206 27-82 (398)
198 TIGR00887 2A0109 phosphate:H+ 94.7 0.063 1.4E-06 52.4 6.0 45 6-50 409-453 (502)
199 TIGR00900 2A0121 H+ Antiporter 94.7 0.063 1.4E-06 49.0 5.7 59 146-206 6-64 (365)
200 PRK09556 uhpT sugar phosphate 94.6 0.17 3.7E-06 48.8 8.7 51 155-207 45-95 (467)
201 COG3202 ATP/ADP translocase [E 94.6 1.6 3.4E-05 42.4 14.7 175 12-206 171-352 (509)
202 TIGR00788 fbt folate/biopterin 94.5 0.1 2.2E-06 50.7 7.0 77 9-95 371-447 (468)
203 PRK08633 2-acyl-glycerophospho 94.5 0.09 1.9E-06 56.4 7.1 72 134-206 4-77 (1146)
204 PF11700 ATG22: Vacuole efflux 94.2 0.083 1.8E-06 51.4 5.5 50 3-52 394-443 (477)
205 PRK10077 xylE D-xylose transpo 94.1 0.094 2E-06 50.4 5.7 41 8-48 383-423 (479)
206 TIGR00711 efflux_EmrB drug res 94.1 0.17 3.6E-06 48.6 7.4 62 143-206 6-67 (485)
207 PRK11128 putative 3-phenylprop 94.0 0.14 3.1E-06 47.8 6.6 56 149-206 14-69 (382)
208 PRK09952 shikimate transporter 94.0 0.076 1.6E-06 50.9 4.7 72 7-94 361-433 (438)
209 TIGR00883 2A0106 metabolite-pr 93.9 0.02 4.3E-07 52.8 0.7 48 5-52 328-376 (394)
210 PRK10213 nepI ribonucleoside t 93.8 0.2 4.4E-06 47.2 7.2 61 156-220 37-97 (394)
211 KOG3762|consensus 93.7 0.13 2.9E-06 50.1 5.8 77 4-98 474-551 (618)
212 TIGR00894 2A0114euk Na(+)-depe 93.6 0.15 3.2E-06 49.0 6.0 64 14-93 386-449 (465)
213 COG2270 Permeases of the major 93.4 0.073 1.6E-06 50.4 3.3 50 3-52 355-404 (438)
214 PRK11102 bicyclomycin/multidru 93.1 0.13 2.9E-06 47.6 4.8 57 156-216 8-64 (377)
215 TIGR00902 2A0127 phenyl propri 92.7 0.34 7.4E-06 45.3 6.9 60 144-205 9-68 (382)
216 COG2271 UhpC Sugar phosphate p 92.5 0.55 1.2E-05 44.7 7.7 81 138-222 28-108 (448)
217 PRK15403 multidrug efflux syst 92.2 0.39 8.4E-06 45.6 6.7 48 158-207 35-82 (413)
218 PRK11902 ampG muropeptide tran 92.0 0.43 9.4E-06 44.9 6.8 51 150-204 10-60 (402)
219 PRK14995 methyl viologen resis 91.9 0.49 1.1E-05 46.1 7.2 64 141-206 8-71 (495)
220 COG3104 PTR2 Dipeptide/tripept 91.4 0.63 1.4E-05 45.1 7.1 78 141-220 23-104 (498)
221 KOG4578|consensus 91.4 0.075 1.6E-06 48.1 0.7 34 251-289 31-67 (421)
222 PF00854 PTR2: POT family; In 91.0 0.24 5.3E-06 46.3 3.9 73 2-92 46-121 (372)
223 PRK11010 ampG muropeptide tran 90.9 0.35 7.5E-06 47.2 4.9 70 8-95 335-404 (491)
224 TIGR00903 2A0129 major facilit 90.8 0.37 8E-06 45.1 4.9 44 6-49 297-340 (368)
225 PRK11462 putative transporter; 90.7 0.66 1.4E-05 44.8 6.6 63 143-206 13-75 (460)
226 PTZ00207 hypothetical protein; 90.7 0.84 1.8E-05 45.7 7.4 66 151-221 39-104 (591)
227 KOG2615|consensus 90.5 0.3 6.6E-06 45.9 3.8 63 7-79 370-432 (451)
228 PRK15075 citrate-proton sympor 90.3 1 2.2E-05 43.0 7.4 64 142-206 18-86 (434)
229 TIGR00806 rfc RFC reduced fola 90.2 1.1 2.4E-05 43.6 7.5 47 160-207 46-93 (511)
230 PF13347 MFS_2: MFS/sugar tran 89.9 0.34 7.3E-06 46.1 3.9 57 149-206 11-71 (428)
231 PRK10406 alpha-ketoglutarate t 89.6 1.1 2.4E-05 42.6 7.2 71 142-216 25-101 (432)
232 TIGR02718 sider_RhtX_FptX side 89.5 0.41 8.8E-06 44.8 4.0 41 11-51 325-366 (390)
233 TIGR00896 CynX cyanate transpo 89.5 0.38 8.3E-06 44.2 3.7 47 158-206 19-65 (355)
234 KOG0637|consensus 89.2 3.5 7.7E-05 39.7 9.9 41 8-48 161-202 (498)
235 PRK06814 acylglycerophosphoeth 88.7 0.57 1.2E-05 50.5 4.9 47 4-50 349-395 (1140)
236 TIGR01301 GPH_sucrose GPH fami 88.7 1.6 3.5E-05 42.6 7.6 57 149-207 14-74 (477)
237 COG2211 MelB Na+/melibiose sym 88.6 1.1 2.3E-05 43.4 6.2 74 143-217 16-89 (467)
238 PF06779 DUF1228: Protein of u 87.9 0.99 2.1E-05 33.0 4.2 65 155-223 8-72 (85)
239 COG2223 NarK Nitrate/nitrite t 87.1 2.2 4.9E-05 40.5 7.1 65 140-206 15-79 (417)
240 KOG3762|consensus 84.4 0.29 6.4E-06 47.9 -0.1 50 155-206 27-76 (618)
241 COG0738 FucP Fucose permease [ 82.2 3.3 7.1E-05 39.3 5.9 62 161-225 34-95 (422)
242 KOG3810|consensus 81.9 16 0.00034 34.4 9.9 40 11-50 116-155 (433)
243 PF03092 BT1: BT1 family; Int 81.6 4.7 0.0001 38.7 7.0 76 12-97 341-416 (433)
244 PF02554 CstA: Carbon starvati 81.4 42 0.00091 31.6 12.7 30 16-46 48-78 (376)
245 KOG4686|consensus 81.0 5.6 0.00012 36.4 6.6 39 12-50 375-413 (459)
246 PF07672 MFS_Mycoplasma: Mycop 78.2 11 0.00024 33.6 7.6 26 71-96 39-64 (267)
247 COG0477 ProP Permeases of the 77.5 3.2 7E-05 35.6 4.1 50 2-51 107-158 (338)
248 PF03137 OATP: Organic Anion T 76.6 0.81 1.7E-05 45.4 0.0 81 146-230 10-91 (539)
249 COG2814 AraJ Arabinose efflux 76.6 8.6 0.00019 36.5 6.8 42 11-52 319-362 (394)
250 PF00083 Sugar_tr: Sugar (and 76.2 0.52 1.1E-05 44.9 -1.4 45 5-49 365-409 (451)
251 KOG2504|consensus 75.7 0.79 1.7E-05 45.1 -0.3 69 9-94 408-476 (509)
252 PRK11469 hypothetical protein; 74.4 52 0.0011 27.8 11.5 24 28-51 41-64 (188)
253 TIGR02230 ATPase_gene1 F0F1-AT 71.6 31 0.00067 26.0 7.4 40 38-86 51-90 (100)
254 COG2807 CynX Cyanate permease 71.1 5.8 0.00013 37.2 4.2 51 1-51 308-359 (395)
255 KOG0253|consensus 69.1 6.6 0.00014 37.2 4.1 73 5-97 450-522 (528)
256 TIGR00901 2A0125 AmpG-related 69.0 6.4 0.00014 36.0 4.1 42 159-204 8-49 (356)
257 KOG1330|consensus 68.6 24 0.00051 34.3 7.7 64 142-207 36-99 (493)
258 COG1971 Predicted membrane pro 67.0 78 0.0017 26.8 11.2 54 143-204 112-165 (190)
259 KOG0252|consensus 66.3 14 0.00031 35.9 5.8 39 183-223 91-129 (538)
260 PF03209 PUCC: PUCC protein; 65.9 17 0.00036 34.6 6.2 79 2-88 314-392 (403)
261 PF05978 UNC-93: Ion channel r 65.1 4.7 0.0001 33.0 2.1 48 1-48 101-148 (156)
262 KOG3555|consensus 65.1 3.5 7.5E-05 37.9 1.4 21 262-282 142-162 (434)
263 KOG0569|consensus 65.1 1.4E+02 0.0031 29.2 14.2 29 24-52 59-87 (485)
264 PF06813 Nodulin-like: Nodulin 64.3 8.1 0.00018 34.3 3.6 53 151-206 14-66 (250)
265 PRK15015 carbon starvation pro 60.4 1.6E+02 0.0035 30.0 12.0 31 16-47 79-110 (701)
266 PF13000 Acatn: Acetyl-coenzym 59.8 61 0.0013 32.0 8.8 64 125-191 264-328 (544)
267 KOG3574|consensus 56.8 67 0.0014 30.8 8.2 76 124-201 250-325 (510)
268 PF07857 DUF1632: CEO family ( 55.0 64 0.0014 28.7 7.6 22 149-170 188-209 (254)
269 KOG3626|consensus 55.0 21 0.00045 36.7 5.0 88 132-222 89-176 (735)
270 PF06609 TRI12: Fungal trichot 54.1 51 0.0011 33.2 7.6 67 137-206 38-108 (599)
271 KOG2532|consensus 53.9 25 0.00054 34.2 5.3 61 19-94 387-447 (466)
272 PRK10263 DNA translocase FtsK; 53.7 3.5E+02 0.0075 30.1 13.8 19 188-206 143-161 (1355)
273 TIGR00880 2_A_01_02 Multidrug 50.2 17 0.00036 27.4 2.9 19 188-206 10-28 (141)
274 COG1966 CstA Carbon starvation 48.1 3E+02 0.0064 27.5 11.5 32 16-47 48-79 (575)
275 COG3350 Uncharacterized conser 48.1 8.6 0.00019 25.3 0.7 8 266-273 3-10 (53)
276 PF04226 Transgly_assoc: Trans 46.3 29 0.00062 22.3 3.0 34 189-223 4-37 (48)
277 KOG3776|consensus 45.5 12 0.00027 36.7 1.7 31 252-287 315-345 (507)
278 PF09512 ThiW: Thiamine-precur 45.3 1.2E+02 0.0027 24.6 7.1 52 146-205 37-88 (150)
279 KOG0254|consensus 44.5 37 0.00081 33.1 4.9 42 178-222 92-133 (513)
280 PF05631 DUF791: Protein of un 44.1 27 0.00059 32.6 3.6 46 168-215 62-107 (354)
281 PF04341 DUF485: Protein of un 41.5 29 0.00064 25.5 2.8 44 142-185 19-62 (91)
282 TIGR01272 gluP glucose/galacto 40.4 23 0.0005 32.2 2.6 48 2-51 243-290 (310)
283 KOG4260|consensus 38.9 15 0.00033 32.8 1.1 30 260-289 170-210 (350)
284 TIGR00926 2A1704 Peptide:H+ sy 38.6 22 0.00047 36.3 2.3 50 154-204 2-51 (654)
285 COG5336 Uncharacterized protei 37.6 39 0.00084 25.8 2.9 21 190-211 57-78 (116)
286 KOG4096|consensus 36.9 14 0.00029 25.9 0.4 37 175-213 11-47 (75)
287 PRK03612 spermidine synthase; 36.9 77 0.0017 31.3 5.8 43 7-50 128-170 (521)
288 COG4890 Predicted outer membra 36.8 81 0.0018 18.7 3.5 22 68-89 2-23 (37)
289 KOG0255|consensus 34.7 64 0.0014 31.4 4.9 41 10-50 427-467 (521)
290 PF06963 FPN1: Ferroportin1 (F 34.4 1.9E+02 0.0042 27.8 7.9 77 144-223 7-83 (432)
291 KOG4332|consensus 34.2 3.8E+02 0.0081 24.7 9.6 89 131-227 240-333 (454)
292 KOG2325|consensus 31.7 18 0.0004 35.3 0.5 42 11-52 410-451 (488)
293 PF02990 EMP70: Endomembrane p 31.1 5.2E+02 0.011 25.5 10.5 19 138-156 260-278 (521)
294 TIGR02359 thiW thiW protein. L 30.9 3E+02 0.0065 22.6 8.1 39 186-224 72-110 (160)
295 PF03741 TerC: Integral membra 29.2 3.4E+02 0.0074 22.7 10.7 39 11-51 18-58 (183)
296 KOG2563|consensus 29.1 66 0.0014 31.2 3.7 54 164-221 69-122 (480)
297 PRK13629 threonine/serine tran 28.6 5.5E+02 0.012 24.9 15.7 29 18-46 17-45 (443)
298 COG4720 Predicted membrane pro 28.1 97 0.0021 25.9 4.0 51 26-86 41-91 (177)
299 PF13829 DUF4191: Domain of un 28.0 2.4E+02 0.0052 24.6 6.6 10 72-82 52-61 (224)
300 PF01130 CD36: CD36 family; I 27.3 46 0.001 32.3 2.4 36 252-287 306-341 (467)
301 PF11151 DUF2929: Protein of u 27.0 2E+02 0.0043 19.2 5.6 24 27-50 4-27 (57)
302 PF11990 DUF3487: Protein of u 26.9 3.1E+02 0.0067 21.4 6.6 30 20-49 16-45 (121)
303 KOG2816|consensus 26.6 44 0.00096 32.5 2.1 52 3-54 344-395 (463)
304 PRK03612 spermidine synthase; 26.4 1.9E+02 0.004 28.7 6.5 50 150-200 25-74 (521)
305 PF14927 Neurensin: Neurensin 25.4 1.9E+02 0.0041 23.2 5.2 30 61-90 32-61 (140)
306 PF09490 CbtA: Probable cobalt 24.0 3.9E+02 0.0084 23.3 7.3 65 25-100 70-134 (227)
307 COG5249 RER1 Golgi protein inv 22.5 3.9E+02 0.0084 21.6 6.3 28 70-98 55-82 (180)
308 KOG4004|consensus 22.3 29 0.00064 29.5 0.0 20 265-284 87-106 (259)
309 PF11872 DUF3392: Protein of u 21.2 3.8E+02 0.0082 20.4 6.0 42 130-171 39-81 (106)
310 PF10639 UPF0546: Uncharacteri 21.1 1.3E+02 0.0029 23.2 3.4 25 128-152 31-55 (113)
311 cd01397 HAT_MBD Methyl-CpG bin 21.0 42 0.00091 23.8 0.6 15 275-289 26-40 (73)
312 PF01770 Folate_carrier: Reduc 20.9 7.5E+02 0.016 23.7 11.8 39 167-205 364-402 (412)
313 PF06813 Nodulin-like: Nodulin 20.9 2.4E+02 0.0052 24.9 5.5 31 9-40 116-146 (250)
314 TIGR02230 ATPase_gene1 F0F1-AT 20.2 1.2E+02 0.0025 22.9 2.8 14 191-204 58-71 (100)
No 1
>KOG3626|consensus
Probab=100.00 E-value=1.8e-74 Score=563.04 Aligned_cols=304 Identities=44% Similarity=0.827 Sum_probs=272.8
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCC-CCCCCCCCCCchhHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLS-IPSDITPSDPRWIGAWWLGLVLV 79 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~-~~~~~~~~~~~W~gaWw~~fii~ 79 (308)
||++|++|+|++|||||++++++++|+|+++++.++||++|+++|++++++|+|++ ....++|.||||+||||+||+++
T Consensus 249 IG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 249 IGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred cCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999994 55789999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCc----cccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHH
Q psy11785 80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTK----KESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPI 155 (308)
Q Consensus 80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~ 155 (308)
|.+.++.++++++|||++|+..+++..++.+....+ ++++...+.++|+|+..++|++||+|++.+++.+++..++
T Consensus 329 g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~ 408 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAI 408 (735)
T ss_pred HHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 999999999999999999987653222111111110 1122223356799999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcCCCC
Q psy11785 156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPM 235 (308)
Q Consensus 156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 235 (308)
.|+.+|+|||||+|||++++.|++++|.+.+|++++|.++||++++|++++.|++++++++++++++++.++++++||++
T Consensus 409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~ 488 (735)
T KOG3626|consen 409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCES 488 (735)
T ss_pred hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred CCccccccCCCCC-------CcccCCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785 236 DEWAGLTNANGIS-------SFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS 306 (308)
Q Consensus 236 ~~~ag~~~~~~~~-------~~~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~ 306 (308)
.+++|++.++.+. ++.++||++ |+|++++|+||||+||+||||||||||++....+.+++.|++|+|+.
T Consensus 489 ~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~--C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~ 564 (735)
T KOG3626|consen 489 SPVAGVTNSYEGSPAFTSHENPFSSCNSD--CSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVP 564 (735)
T ss_pred CcccceecCCCCCCccccCCCchhhhhcC--CCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccc
Confidence 9999999765322 145679999 99999999999999999999999999999988888899999999985
No 2
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=3.8e-60 Score=470.91 Aligned_cols=303 Identities=36% Similarity=0.710 Sum_probs=255.8
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC----CCCCCCCCCchhHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSI----PSDITPSDPRWIGAWWLGL 76 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~----~~~~~~~~~~W~gaWw~~f 76 (308)
+|+++.++++.+|+||++|+++|++++|+++++..+||++||++|+++++.|+||+. +.+++|+||||+|+||++|
T Consensus 184 iG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 184 IGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred ccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999998853 2468999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCccC-Cc-ccccCCCcc--ccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785 77 VLVAVFLMLAAVAMFMFPKTLTKASPVNG-TT-TVATLPTKK--ESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI 152 (308)
Q Consensus 77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~ 152 (308)
++.+++.++.+++++++|+++|+..++.+ +. +.....+.. .+.+.....+++++.+++++|||.|+...++.++..
T Consensus 264 li~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~ 343 (633)
T TIGR00805 264 LICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDS 343 (633)
T ss_pred HHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999998888888999999886432111 00 000000000 000011123457788999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcC
Q psy11785 153 LPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIG 232 (308)
Q Consensus 153 ~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
.+++++.+|+|+|+|+++|+++++++++++...++++++|.+++|+++||++++.+++++++++++++++++..+.++++
T Consensus 344 ~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (633)
T TIGR00805 344 LAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIG 423 (633)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence 99999999999999999999999999998877777788999999999999999999999999999999998888888999
Q ss_pred CCCCCccccccCCCCC---Cccc-CCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785 233 CPMDEWAGLTNANGIS---SFEP-MCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS 306 (308)
Q Consensus 233 C~~~~~ag~~~~~~~~---~~~~-~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~ 306 (308)
|++.++||++.+|++. +.++ +||++ |+|+.++|+||||+||+||||||||||+++.. ++.+++|++|+||.
T Consensus 424 C~~~~~agv~~~y~~~~~~~~~~~~Cn~~--C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~-~~~~~~y~~CsCi~ 498 (633)
T TIGR00805 424 CESAPVAGVNNPSTDQSIYVENPTDCNRQ--CSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVG-TGSNMVYTNCSCVQ 498 (633)
T ss_pred CCCCccceeeccCCCcccCCCChhccCCC--CCCCCCCcccccCCCCCEEECccccCCCCccC-CCCcceeccccccc
Confidence 9999999999876432 3455 89999 99999999999999999999999999996543 44456799999983
No 3
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=100.00 E-value=5.4e-54 Score=417.98 Aligned_cols=262 Identities=42% Similarity=0.800 Sum_probs=1.6
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC----CCCCCCCchhHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS----DITPSDPRWIGAWWLGL 76 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~----~~~~~~~~W~gaWw~~f 76 (308)
+|++|+||+|.+|||||+++++.+.|+|+++++..+||++|+++||+++++|+|++.++ +++|+||||+||||+||
T Consensus 153 iG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGf 232 (539)
T PF03137_consen 153 IGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGF 232 (539)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred ccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999998654 78999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCccCCcc-----cccCC-Cc-cccc---cCCCCCCcchHHHHHhhcChHHHHHHH
Q psy11785 77 VLVAVFLMLAAVAMFMFPKTLTKASPVNGTTT-----VATLP-TK-KESN---QKNPSLKDFPKAVKRLLKNDILMYRTA 146 (308)
Q Consensus 77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~-----~~~~~-~~-~~~~---~~~~~~~~~~~~~~~Ll~n~~f~~~~l 146 (308)
++.|++.++.++++++|||++|+.++.++.++ .+... +. .+++ .....++++++++++|+|||+|++.++
T Consensus 233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l 312 (539)
T PF03137_consen 233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL 312 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence 99999999999999999999998732211110 00000 00 0111 112456899999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHh
Q psy11785 147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMG 226 (308)
Q Consensus 147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
+.+++.+++.|+.+|+|||+|+||++++++|++++|.+.+|++++|.++||+++||++++.|+++++++++.+++.+++.
T Consensus 313 a~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~ 392 (539)
T PF03137_consen 313 AGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYS 392 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998878
Q ss_pred HHHhcCCCCCCccccccCCC-CCCcccCCCCCCCccCCC
Q psy11785 227 ILTFIGCPMDEWAGLTNANG-ISSFEPMCATTHGCECDH 264 (308)
Q Consensus 227 ~~~~~~C~~~~~ag~~~~~~-~~~~~~~Cn~~~~C~C~~ 264 (308)
++++++||++++||++.+|. +......||.. |.|+.
T Consensus 393 ~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~--~~Cn~ 429 (539)
T PF03137_consen 393 PLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLT--CSCNS 429 (539)
T ss_dssp ---------------------------------------
T ss_pred HHHeecCCCCceeeecCccccccCCCCCCCCC--CCCCC
Confidence 88899999999999998773 22234456666 55543
No 4
>cd01330 KAZAL_SLC21 The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.
Probab=99.85 E-value=5.5e-22 Score=131.87 Aligned_cols=54 Identities=35% Similarity=0.905 Sum_probs=46.8
Q ss_pred cccCCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785 250 FEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS 306 (308)
Q Consensus 250 ~~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~ 306 (308)
+++.||++ |+|+.+.|+||||+||+||||||||||++... ..+.+.|++|+||.
T Consensus 1 ~~~~Cn~~--C~C~~~~~~PVCg~~g~tY~SpC~AGC~~~~~-~~~~~~y~~CsCi~ 54 (54)
T cd01330 1 LTSSCNSN--CSCSESAYSPVCGENGITYFSPCHAGCTNSTG-SGGSKIYTNCSCVG 54 (54)
T ss_pred CccccCCC--CCCCCCCcCCccCCCCCEEcCHhHcCCccccc-CCCceeeccccccC
Confidence 35789999 99999999999999999999999999997653 34456899999984
No 5
>KOG2532|consensus
Probab=99.68 E-value=2.1e-16 Score=151.86 Aligned_cols=214 Identities=14% Similarity=0.115 Sum_probs=161.6
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+++..+|...+++..|.|++||++.+++++++..+|++++..++|++.+.. .+|...|.+.|+
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~-----------------~GW~sifY~~g~ 203 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS-----------------LGWPSIFYVFGI 203 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC-----------------CCCchHHHHHHH
Confidence 567788999999999999999999999999999999999999999998741 148889999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++++.+.++.+.++.|++++...++|.+.+.++..+++.+++ .+.++++++|++.++...++.+.....++.+.++
T Consensus 204 ~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~---~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 204 VGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKK---PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCC---CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888877654333332222111111111111 2235899999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC---ccchhHH-HHHHHHHHHHHHhHHHhcCCCCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN---ARFVAAW-IAITAVLYALGMGILTFIGCPMD 236 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~C~~~ 236 (308)
+|+|+++.+|++..+.|++.++.. ..+.+-.+++|++.||+..| .+...|+ ..+......++++.+.+++|++.
T Consensus 281 ~PtY~~~VL~f~v~~~G~~salP~-l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~ 358 (466)
T KOG2532|consen 281 LPTYLKEVLGFDVRETGFLSALPF-LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR 358 (466)
T ss_pred hhHHHHHHhCCChhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc
Confidence 999999999999999999876443 34566778999999998653 2233333 34444444444555556777776
No 6
>KOG1330|consensus
Probab=99.67 E-value=1.2e-17 Score=155.67 Aligned_cols=177 Identities=17% Similarity=0.300 Sum_probs=141.3
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
||+|...|+++++|+|++|.++|++.+++++.+..+|.++|++.|+.+.+.- .| ||.+|...|
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~--------------~~---Wr~af~~~a 195 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT--------------FW---WRWAFRGSA 195 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc--------------cc---eEEEEEeeh
Confidence 6999999999999999999999999999999999999999999999887642 12 777888899
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
+++++.+++.+++.++.++..+.+.+.+ .+ ...+..+..+.++.+.|+|++...+++.....+...++.-
T Consensus 196 vl~vi~~~L~~~f~~eP~rga~~~~~~~---------~~-~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sw 265 (493)
T KOG1330|consen 196 VLGVIVGLLVFLFVREPERGARDEVDGE---------NK-MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSW 265 (493)
T ss_pred HHHHHHHHHHHhhccCcccccccccccC---------Cc-CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccch
Confidence 9988888877766555332222111111 00 0112335677889999999999999999999999999999
Q ss_pred HHHHHHHHHhCCC--cccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 161 FLPKYFETQFRLP--SHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 161 ~~P~yl~~~~gls--~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
|.|++++..+.+. ..+.+++++.+...+..+|.++||.+.||+.
T Consensus 266 w~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~ 311 (493)
T KOG1330|consen 266 WAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLS 311 (493)
T ss_pred hhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHH
Confidence 9999998877665 5667888888888888999999999999954
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.67 E-value=3.3e-16 Score=150.83 Aligned_cols=185 Identities=14% Similarity=0.144 Sum_probs=135.8
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
++++..+|...+++.|++|+++|++++|+..++..+|.++||++++++.+.+ .+|+..|++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~-----------------~gw~~~f~i~~ 205 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW-----------------GGWPMIFYVFG 205 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------CCCCeehhhhh
Confidence 3678889999999999999999999999999999999999999999876531 13777788888
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
+..+++.+.++.++++.|+.+++..+++.+...+..++++.+.+ ....++++++++.++...+..+......+.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (465)
T TIGR00894 206 IVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTR---QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPT 282 (465)
T ss_pred HHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCC---CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777776666665644322111111100000000000000 112367899999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|+|.|+++++|++..+++++..... .+.+++.+++|++.||++.|
T Consensus 283 ~lp~~l~~~~g~s~~~~g~~~~~~~-~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 283 YLPTFISWVLRVSGKENGLLSSLPY-LFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHhCcChHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999998765443 35678889999999997543
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.64 E-value=6.8e-16 Score=148.95 Aligned_cols=189 Identities=11% Similarity=0.059 Sum_probs=130.1
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|++...|...+++.|++|+++|++++|++.++..+|+++|+++..++.+.+.. +.|+..|.+.++
T Consensus 135 ~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~---------------~~~~~~f~~~g~ 199 (467)
T PRK09556 135 FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD---------------GHVIGMFIFPSI 199 (467)
T ss_pred HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc---------------CcchhHHHHHHH
Confidence 45666788899999999999999999999999999999999998776653211 125556777777
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccc-cCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESN-QKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
+.++.+++++++.++.|++......++........+++ ..+++. +..+. .++++|||.++...+..++.....+++.
T Consensus 200 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 278 (467)
T PRK09556 200 IALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDM-TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGID 278 (467)
T ss_pred HHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccC-cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 77766666555545545433211111100000000000 000111 11121 2348899999999988888888888999
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+|+|.|+++++|+|+.+++++..... .+.++|.+++|++.||+++|.
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~-~~~~ig~~~~G~lsDr~g~r~ 325 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFE-IGALVGSLLWGWLSDLANGRR 325 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999999988765443 356889999999999998663
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.61 E-value=4.9e-15 Score=137.22 Aligned_cols=187 Identities=16% Similarity=0.147 Sum_probs=129.3
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++|+++|++++++......+|.++||.+++++.+.+ .|+..|.+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~ 156 (399)
T TIGR00893 95 AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF------------------SWQWAFIIEGV 156 (399)
T ss_pred HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC------------------CchHHHHHHHH
Confidence 445677888999999999999999999999999999999999999877532 25666777766
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccc-cCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVA-TLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+..+.+.++.|++++...+++.. ..+...++.+.++..+......+++++||.++...+..++.......+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT 236 (399)
T ss_pred HHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHH
Confidence 66555555444444333322111110000 00000000000001112233467889999999888888888888999999
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
++|.|+++.+|.++.+++++.....+ ..+++.+++|++.||+++|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 237 WFPTYLVQERGLSILEAGFMASLPGI-VGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHhcccHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998887654433 45788999999999998764
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=6.7e-15 Score=136.26 Aligned_cols=186 Identities=15% Similarity=0.171 Sum_probs=138.1
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHH--HhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILG--SFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lG--g~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.-+|-....|..|++++|||++.++++++-.+|.++.|++. +++...+ .|+.+|++-|++
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~------------------~w~~~f~~pgii 194 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG------------------GWRAAFYFPGII 194 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc------------------chhHHHHHHHHH
Confidence 34566778899999999999999999999999999999888 6554322 388999999999
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcc-c-ccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTT-V-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
.+++++..++.-|+.|++.-...-++ . +..+..+++++. +.........+.+++||..|.+.++.++.+.+=++..-
T Consensus 195 aiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~-~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~d 273 (448)
T COG2271 195 AIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKEN-EGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIND 273 (448)
T ss_pred HHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccC-CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhh
Confidence 99999887777777776542111000 0 000000111111 11211223567899999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccch
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFV 210 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~ 210 (308)
|.|.|+.++.|+|..+++...+..= .+++.|+++.||++||+-...|..
T Consensus 274 W~p~YL~e~k~~s~~~a~~a~~lfE-~agl~G~Ll~GwlSDklfkgrR~p 322 (448)
T COG2271 274 WGPLYLSEVKGFSLVKANWAISLFE-VAGLPGTLLAGWLSDKLFKGRRGP 322 (448)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcccccch
Confidence 9999999999999999998776543 356889999999999975444443
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.59 E-value=2.9e-14 Score=136.39 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=121.3
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..++...+++.|++|+++|++++|+++.+..+|.++||.+++++.+.+ +|+..|.+.+++
T Consensus 125 ~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------gw~~~f~~~~i~ 186 (434)
T PRK11663 125 QGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY------------------GWRYGMMIAGII 186 (434)
T ss_pred HHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------cHHHHHHHHHHH
Confidence 34456778889999999999999999999999999999999999887532 377778777766
Q ss_pred HHHHHHHH-HhccCCCCCCCCccCC-c-ccccCCCccccccCCCCCCcchHHH-HHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785 83 LMLAAVAM-FMFPKTLTKASPVNGT-T-TVATLPTKKESNQKNPSLKDFPKAV-KRLLKNDILMYRTASSVLHILPIAGL 158 (308)
Q Consensus 83 ~ll~~i~~-~~~p~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~Ll~n~~f~~~~l~~~~~~~~~~~~ 158 (308)
.++.++.+ +.++++ |+..+.+.. + +.+..+..+++++.+. +..+.+ ..++|||.++...+.........+++
T Consensus 187 ~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (434)
T PRK11663 187 AIVVGLFLCWRLRDK-PQAMGLPSVGEWRHDALELAQQQEGAGL---SRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAI 262 (434)
T ss_pred HHHHHHHHHHHcCCC-HhhcCCCCcccccccccccchhccccCC---ChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 55544433 334443 322111100 0 0000000000000001 111122 24778999888877777777777888
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+|+|.|+++++|+++.++++......+ +.++|.+++|++.||+..+
T Consensus 263 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~-~~~~g~~~~g~l~dr~~~~ 309 (434)
T PRK11663 263 NDWGNLYMSETLGVDLVTANSAVSMFEL-GGFIGALVAGWGSDKLFNG 309 (434)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHH-HHHHHHHHHhhhHHHhccC
Confidence 8999999998999999999887665543 5688999999999998433
No 12
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.58 E-value=1.9e-14 Score=133.00 Aligned_cols=185 Identities=13% Similarity=0.155 Sum_probs=124.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHH-HHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGF-ILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~-~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+.+..++...+++.|++|+++|++++++......+|.++|| ++++.+...+ .|+..|++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 157 (379)
T TIGR00881 96 FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY------------------SWHWVFIVPG 157 (379)
T ss_pred hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC------------------CchhHHHHHH
Confidence 45677889999999999999999999999999999999999 5666654321 2556677776
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCccc-ccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
++.++..+..+.+.++.|+.++.+..++. ....+..+++ .++..+......++++++|.++...+...+......++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEK-KEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL 236 (379)
T ss_pred HHHHHHHHHHheeeCCCccccccCccccCccccccccccc-ccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 66555544444333333322211110000 0000000000 011111223346788999999888888888888888999
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.++|.|+++++|+++.+++++.....+ +.++|.++.|++.||+..+
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYEL-GGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH-HcchhHHHHHHHHHHHcCC
Confidence 999999999999999999887665443 4578899999999986444
No 13
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.56 E-value=8.6e-14 Score=133.21 Aligned_cols=184 Identities=14% Similarity=0.133 Sum_probs=121.7
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..++...+++.|++|+++|++++|+++++..+|.++++.+.+.....+ .+|+..|++.++.
T Consensus 132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----------------~~w~~~f~~~~~~ 194 (438)
T TIGR00712 132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-----------------NDWHAALYFPAIC 194 (438)
T ss_pred hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh-----------------hhhHHHHHHHHHH
Confidence 34455667788889999999999999999999999999988777654321 2477888887777
Q ss_pred HHHHHHH-HHhccCCCCCCCCccC-CcccccCCCccccccCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 83 LMLAAVA-MFMFPKTLTKASPVNG-TTTVATLPTKKESNQKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 83 ~ll~~i~-~~~~p~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
.++..+. +++.|++ |+..+.++ +++..+.++... ++.+.+. +..+. .++++||+.++...+...+.....+++.
T Consensus 195 ~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T TIGR00712 195 AIIVALFAFAMMRDT-PQSCGLPPIEEYRNDYPDDYN-EKAEQEL-TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVL 271 (438)
T ss_pred HHHHHHHHHHhccCC-HHhcCCCCchhcccccccccc-ccccccc-chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHH
Confidence 6665544 3444443 33211111 000000000000 0000111 11111 2357899999888888777778888999
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+++|.|+++++|+++.+++++..+..+ +.++|.+++|++.||++.+.
T Consensus 272 ~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 272 DWSPTYLKEVKHFALDKSSWAYFLYEY-AGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HhHHHHHHHccCCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999887655443 45788999999999986443
No 14
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.53 E-value=9.2e-14 Score=129.46 Aligned_cols=166 Identities=16% Similarity=0.245 Sum_probs=122.7
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++|+++|++++|+.+....+|.++||.+++++.+.+ +|+..|.+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------~~~~~~~~~~~ 167 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL------------------SWHAIFAFLSL 167 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------CHHHHHHHHHH
Confidence 455667788899999999999999999999999999999999999887632 36666776666
Q ss_pred HHHHHHHHHHh-ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAMFM-FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~~~-~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+..+. .|++.++ +++ ...++..+..++++|||.++...+...+.....+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (385)
T TIGR00710 168 AGILLSALIFFILPETLPY-EAR-------------------IQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFS 227 (385)
T ss_pred HHHHHHHHHHHhCCCCCCC-ccc-------------------CCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 55554444333 3332111 000 00112234567888999998877777777777888899
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.|.|+++++|+++.+++++..... .+.+++.+++|++.||+++|
T Consensus 228 ~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~~~~~~~ 272 (385)
T TIGR00710 228 GAPFVYIDIMGVSPSVFGLLFALNI-IAMIFGGFLNGRFIKKWGAK 272 (385)
T ss_pred cChHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999998765543 35678899999999999754
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.3e-13 Score=128.48 Aligned_cols=161 Identities=20% Similarity=0.302 Sum_probs=128.6
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+.+++++.++..|.+|+++|+++++++..+..++.++|..+|.++-+++ +||..|.+.+.+
T Consensus 115 ~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------------------GWR~~F~~ia~l 176 (394)
T COG2814 115 HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------------------GWRATFLAIAVL 176 (394)
T ss_pred HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh------------------hHHHHHHHHHHH
Confidence 35677888999999999999999999999999999999999999998754 499999988877
Q ss_pred HHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++..+. +..+| |++.+.+ .+.-.+...+++|||..+...+...+...+.+...+|
T Consensus 177 ~ll~~~~~~~~lP---~~~~~~~--------------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftY 233 (394)
T COG2814 177 ALLALLLLWKLLP---PSEISGS--------------------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTY 233 (394)
T ss_pred HHHHHHHHHHhCC---CccCCCC--------------------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHh
Confidence 7665443 44455 1111110 0011233568999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+-.|+|+..|+|.+..++.+-...+ ++++|++++|++.|| +.+
T Consensus 234 i~P~L~~v~g~s~~~vs~~Ll~~Gv-~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 234 IRPFLESVAGFSVSAVSLVLLAFGI-AGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred HHHHHHHccCCCHhHHHHHHHHHHH-HHHHHHHHHhhhccc-cch
Confidence 9999999999999999987655543 668999999999999 433
No 16
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.51 E-value=2.3e-13 Score=127.67 Aligned_cols=157 Identities=13% Similarity=0.029 Sum_probs=112.5
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
++...+.+.|++|+++|+++++++.++..+|.++|+++++++.+.+ +||..|++.+++.++.
T Consensus 96 ~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------------------gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 96 LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------------------GLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------chHHHHHHHHHHHHHH
Confidence 4556677789999999999999999999999999999999987632 3788888877776665
Q ss_pred HHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785 87 AVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY 165 (308)
Q Consensus 87 ~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y 165 (308)
.+.+ +.+||+ |+.+++ . .+ .++..+.+++++|||.++...+..++.....+++.+|+|+|
T Consensus 158 ~~~~~~~lp~~-p~~~~~----~-------~~-------~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~ 218 (368)
T TIGR00903 158 IILVLAALPAL-PFQAAE----G-------FG-------FKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA 218 (368)
T ss_pred HHHHHHHcCCC-CCCCCC----C-------cc-------hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5543 344443 221110 0 00 00122357889999999999999999999999999999999
Q ss_pred HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 166 FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 166 l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+++ .|++.. ++..... ....|.+..+++.||..++
T Consensus 219 L~~-~g~s~~-~~~~~~l----~~~~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 219 LRP-AGLEDI-AGDAVAL----AILAGLIGVAVIPDRVARA 253 (368)
T ss_pred HHH-CCCChH-HHHHHHH----HHHHHHHHHHHhhHHhhhh
Confidence 975 678764 4443322 2234555568999997654
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.51 E-value=2.1e-13 Score=130.29 Aligned_cols=173 Identities=16% Similarity=0.185 Sum_probs=117.2
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|.++.+|.+.+++.|++|+++|+++.++...+...|++++++++..+.....+. .-+.| +||..|++.+
T Consensus 136 ~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------~~~~~--gWr~~F~i~~ 205 (432)
T PRK10406 136 LSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA--------ELREW--GWRIPFALGA 205 (432)
T ss_pred hhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------HHhcc--chHHHHHHHH
Confidence 3677889999999999999999999999999888899999988876655432110 00122 5888998876
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHH-HHHHHHHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVL-HILPIAGLY 159 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~-~~~~~~~~~ 159 (308)
++.++.. .+.+..|+.++.++ + + + ++ . ..+++++||+.++...+...+ .....+++.
T Consensus 206 ~~~ll~~----~~~~~~~e~~~~~~--~--------~-~--~~-~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
T PRK10406 206 VLAVVAL----WLRRQLDETSQQET--R--------A-L--KE-A----GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFT 263 (432)
T ss_pred HHHHHHH----HHHhcCCCCchHHH--h--------h-h--cc-c----ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554432 22233333221110 0 0 0 00 0 124667888888766655444 366788899
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|+|.|+++++|++..++++......+ ..+++..+.|++.||+++|
T Consensus 264 ~~lp~~l~~~~g~s~~~~~~~~~i~~~-~~~i~~~~~G~l~Dr~grr 309 (432)
T PRK10406 264 TYMQKYLVNTAGMHANVASGIMTAALF-VFMLIQPLIGALSDKIGRR 309 (432)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCch
Confidence 999999999999999888876554433 3356667889999999866
No 18
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.50 E-value=1.7e-13 Score=127.07 Aligned_cols=172 Identities=10% Similarity=0.063 Sum_probs=120.0
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
.+...+++.|++|+|+|+++.|+..++..+|.++|+.+++.+.+.+.+ ....+| +|+..|++.++..++.
T Consensus 101 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~--------~~~~~~--~wr~~f~i~ai~~l~~ 170 (356)
T TIGR00901 101 DIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA--------NTGLIT--LWGYIFFWTALLILPG 170 (356)
T ss_pred HHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------cccccc--ccHHHHHHHHHHHHHH
Confidence 345577899999999999999999999999999999999988765421 011244 4888898887766554
Q ss_pred HHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChH---HHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 87 AVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDI---LMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 87 ~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~---f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
.+..++..++ ++++++. + + + ..++....++++++||. ++...+..++.....+...+++|
T Consensus 171 ~~~~~~~~~e-~~~~~~~-~-~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (356)
T TIGR00901 171 LLVTLFLAKE-PQEDASV-P-K--------P------LTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTT 233 (356)
T ss_pred HHHHHHhccC-CCccccc-c-h--------h------HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433332222 1111000 0 0 0 00122345677788875 66666666666777888899999
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++ +|+++.+.+.+.+.....+.++|.+++|++.||++++
T Consensus 234 ~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 275 (356)
T TIGR00901 234 LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL 275 (356)
T ss_pred HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 99988 8999999988776555456678999999999999855
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.50 E-value=1.5e-13 Score=130.70 Aligned_cols=192 Identities=8% Similarity=0.073 Sum_probs=123.9
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|++..+|...+++.|++|+++|++++|++.....+|.++|+++++++...- + ..+. .+||..|++.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~-----~~~~------~gwr~~f~~~~~ 176 (412)
T TIGR02332 109 AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD-G-----LMAL------KGWQWLFLLEGF 176 (412)
T ss_pred HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-----CCCc------cchhHHHHHHHH
Confidence 566677888899999999999999999999999999999999999886420 0 0000 137777888777
Q ss_pred HHHHHHHHHHhccCCCCCCCCcc-C-Ccc-c-ccCCCc----c-ccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVN-G-TTT-V-ATLPTK----K-ESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI 152 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~-~-~~~-~-~~~~~~----~-~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~ 152 (308)
..++..+.++++.++.|++++.. + +++ . +..+.. + .++..++........+++++ +|.++...+...+..
T Consensus 177 ~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 255 (412)
T TIGR02332 177 PSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLT 255 (412)
T ss_pred HHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHH
Confidence 76665555444434444432110 0 000 0 000000 0 00000000000112344444 688888888888888
Q ss_pred HHHHHHHhHHHHHHHHH-hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 153 LPIAGLYTFLPKYFETQ-FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 153 ~~~~~~~~~~P~yl~~~-~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
...+++.+|+|.|+++. ++++..+++++..... .+.++|.+++|++.||++.|.
T Consensus 256 ~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~-l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 256 NTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQ-FCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHH-HHHHHHHHHHHHHhcccCccH
Confidence 88999999999999883 4778888887665443 356889999999999998653
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=3.4e-13 Score=126.89 Aligned_cols=160 Identities=11% Similarity=0.132 Sum_probs=116.4
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..++...+++.|++|+++|++++|++.++..+|.++||.+++.+.+.+ +||..|.+.+++
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~------------------gw~~~f~~~~~~ 172 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL------------------GWRTTFLAIGGG 172 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh------------------cHHHHHHHHHHH
Confidence 34566788899999999999999999999999999999999999887643 377777777766
Q ss_pred HHHHHHHHHh-ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVAMFM-FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~~~~-~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++..+..+. .|+. ++ ++ + . ..+..++++|||.++...+...+.....++..++
T Consensus 173 ~~l~~~~~~~~~~~~-~~---~~-~----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (390)
T PRK03545 173 ALITLLLLIKLLPLL-PS---EH-S----------------G----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSY 227 (390)
T ss_pred HHHHHHHHHHhCCCC-CC---CC-c----------------c----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443332 2321 11 00 0 0 0123567889998876655555555566666788
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|.|+++++|+|+.+++++.....+ +.++|.++.|++.||++++
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~ 271 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGG-AGIIGSVLFSRLGNRHPSG 271 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHH-HHHHHHHHHHHHhhccchh
Confidence 8999999999999999887655443 4678899999999998743
No 21
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.48 E-value=3e-13 Score=126.10 Aligned_cols=167 Identities=15% Similarity=0.176 Sum_probs=121.1
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...+...+++.|++|+++|++.+++.+....+|..+||++++.+.+.+ +|+..|.+.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~ 154 (377)
T PRK11102 93 AAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF------------------SWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------ChHHHHHHHHHH
Confidence 34455677889999999999999999999999999999999999887632 266667766665
Q ss_pred HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++..+.. +..|++.++++++ +.+.++..+..+++++||.++...+...+.....+.+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T PRK11102 155 AILAAALVFFFIPETLPKERRQ------------------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTA 216 (377)
T ss_pred HHHHHHHHHHhCCccCcccccC------------------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHc
Confidence 55544433 3344432211000 0011123345678899998887777777777777888889
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|.++++++|+++.+++++..... .+.+++.+++|++.||+++|
T Consensus 217 ~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 217 GPFVYIELNGVSPQNFGYYFALNI-VFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCHH
Confidence 999999999999999998776543 35678889999999999854
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.47 E-value=3.8e-13 Score=130.88 Aligned_cols=184 Identities=11% Similarity=0.159 Sum_probs=120.1
Q ss_pred ccccccccchhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
|++..+|...+.+.+.+ |+++|++++|++.+...+|+++||.+||++.+.+ .||..|.+..
T Consensus 107 g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~------------------gwr~~f~i~~ 168 (495)
T PRK14995 107 GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF------------------YWGSVFLINV 168 (495)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------------------ChHHHHHHHH
Confidence 44556666677775554 7899999999999999999999999999998743 2555566655
Q ss_pred HHHHHHHH-HHHhccCCCCCCCCccCCc-ccc-----------cCCC-cccc-cc-------------------CCCCCC
Q psy11785 81 VFLMLAAV-AMFMFPKTLTKASPVNGTT-TVA-----------TLPT-KKES-NQ-------------------KNPSLK 126 (308)
Q Consensus 81 ~~~ll~~i-~~~~~p~~~p~~~~~~~~~-~~~-----------~~~~-~~~~-~~-------------------~~~~~~ 126 (308)
.+.++..+ .++..|++. +++.++.+. ... .... .+.. .. .+.+.
T Consensus 169 ~~~~~~~~l~~~~l~~~~-~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~- 246 (495)
T PRK14995 169 PIVLVVMGLTARYVPRQA-GRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAA- 246 (495)
T ss_pred HHHHHHHHHHHHhCCCCC-CCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 44444333 234445432 211111100 000 0000 0000 00 00000
Q ss_pred cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.|....+++|||.+....+..++....++++..++|.|+|..+|+|+.++|+.+....+ +..++.+++|++.||++.|
T Consensus 247 ~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~-~~~~~~~~~g~l~~r~g~~ 325 (495)
T PRK14995 247 SRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMV-ASGFSGPIAGILVSRLGLR 325 (495)
T ss_pred CCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCch
Confidence 011112578999999888888888888888999999999999999999999998765543 4677889999999999864
No 23
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.47 E-value=6.1e-13 Score=123.29 Aligned_cols=166 Identities=17% Similarity=0.189 Sum_probs=127.7
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
++.+..+++++..++|||++|.++|+.. +..+|.++.-+++-.+.....+ +.|+..-.+..+..
T Consensus 119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~---------------~~w~~~~~i~~~~l 182 (417)
T COG2223 119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF---------------LAWRNVAGIYVVAL 182 (417)
T ss_pred cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh---------------HHHHHHHHHHHHHH
Confidence 4567899999999999999999999999 8888888888888777654311 13766666666666
Q ss_pred HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
++.++..+++-++.|+.+...+ +.+ +..++.+++|+..|..++.+...+..+.++..++|
T Consensus 183 ~v~~v~~~~~~~d~p~~r~~~~------------------~~~--~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~ 242 (417)
T COG2223 183 AIAAVLAWLGMNDVPEHRASVK------------------PQL--PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLP 242 (417)
T ss_pred HHHHHHHHHHhCCChhhhcccc------------------ccc--hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666676665421110 011 14567889999999999999999999999999999
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++|||+++.++|.+.....+++. +.-.+||++.||++.+
T Consensus 243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~-l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 243 MYLVTQFGLSPVTAGLIAFLFPLIGA-LARPLGGWLSDRIGGR 284 (417)
T ss_pred HHHHHhcCCChhhHHHHHHHHHHHHH-HHHhccchhhhhccch
Confidence 99999999999999987765555543 4467899999999865
No 24
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.47 E-value=3.6e-13 Score=127.30 Aligned_cols=171 Identities=15% Similarity=0.122 Sum_probs=116.7
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|++..+|...+++.|++|+++|++++|++.....+|.++||.+||++.+. .|+..+.+.+.
T Consensus 101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-------------------~~~~~~~i~~~ 161 (393)
T PRK11195 101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-------------------HAEAALAVCAL 161 (393)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHH
Confidence 56778899999999999999999999999999999999999999998762 15566665554
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
..++..+..+.+|+..++.++ ++ + + .....+++.+..+.+++||.+....+...+...........
T Consensus 162 ~~~~~~~~~~~l~~~~~~~~~-~~--~--------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARRPG-QS--W--------N---PIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFL 227 (393)
T ss_pred HHHHHHHHHhcCCCCcccccc-cC--C--------C---HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHH
Confidence 443333344455543211100 00 0 0 00001233344577889998765555544455556666777
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|.|+++.+|+++.++|++.....+ ++++|.++.+++.||.+.+
T Consensus 228 ~~~~~~~~lg~s~~~~G~~~~~~~~-g~i~g~~~~~~l~~~~~~~ 271 (393)
T PRK11195 228 VLAWAPVALGITLNQPAYLQAVVAI-GIAVGAGAAARLVTLETVL 271 (393)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhcCCccc
Confidence 8889999999999999987765433 5677777888887776543
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.46 E-value=4e-13 Score=123.67 Aligned_cols=171 Identities=19% Similarity=0.109 Sum_probs=118.8
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...+...+++.|++|+++|++++|+......+|.++||.+++++.+.+ .|+..|.+.++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------g~~~~~~~~~~~ 167 (365)
T TIGR00900 106 QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL------------------GIKWAIWVDAVG 167 (365)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHH
Confidence 44556778899999999999999999999999999999999999987642 366677766655
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH-hH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY-TF 161 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~-~~ 161 (308)
.++..+.++.++.+ +.++++.+ + .+ ++..++..+..+.++|||.++...+..........+.. .+
T Consensus 168 ~~~~~~~~~~~~~~--~~~~~~~~-~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (365)
T TIGR00900 168 FAISALLIVSVRIP--ELAASEIQ-A--------LS---NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVAL 233 (365)
T ss_pred HHHHHHHHHhcccc--cCCCcccc-c--------cc---hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333333221 11110000 0 00 00011233456778899988877777776666666666 89
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|.|+++.+|+++.+.+++.....+ +.+++.++.+++.||++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ 277 (365)
T TIGR00900 234 FPYVQSKYLGRGSTHYGWVLAAFGL-GALLGALLLGLLGRYFKRM 277 (365)
T ss_pred hHHHHHHHhCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhchh
Confidence 9999998899999999887655443 4577888889999998754
No 26
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.46 E-value=1.1e-12 Score=126.13 Aligned_cols=182 Identities=13% Similarity=0.091 Sum_probs=115.2
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHH-HHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGP-SLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp-~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
.+..+|...+.+.|++|+++|++++|+++.+..+|. .++|+++..+... .+|+..|++.++
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~------------------~gw~~~f~i~~~ 195 (452)
T PRK11273 134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF------------------NDWHAALYMPAF 195 (452)
T ss_pred HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh------------------ccHHHHHHHHHH
Confidence 344556667788899999999999999999988886 4566655433211 137777887776
Q ss_pred HHHHHHHH-HHhccCCCCCCCCccCCcc-cccCCCccccccCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVA-MFMFPKTLTKASPVNGTTT-VATLPTKKESNQKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGL 158 (308)
Q Consensus 82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~ 158 (308)
+.++..++ +++.|++ |++...++.++ .+..++..+++ .+. .++.... .+.++|||.++...+...+.....+++
T Consensus 196 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 272 (452)
T PRK11273 196 AAILVALFAFAMMRDT-PQSCGLPPIEEYKNDYPDDYNEK-HEQ-ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGI 272 (452)
T ss_pred HHHHHHHHHHHHccCC-HhhcCCCChhhhhhccccccccc-cCC-CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 65555444 3444443 33211111000 00000000000 000 0111111 235789999998888888888888899
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+|+|.|+++++|++..+++++..... .+.++|.+++|++.||++.+
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYE-YAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHccC
Confidence 999999999999999998887665433 34567899999999998543
No 27
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.46 E-value=6.3e-13 Score=125.68 Aligned_cols=167 Identities=11% Similarity=0.030 Sum_probs=115.7
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
...+...+++.|++|+|+|+++.++..++..+|.++|+.+++++.+.+ .+|+..|++.++..+
T Consensus 110 ~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~-----------------~gw~~~f~i~a~~~l 172 (402)
T PRK11902 110 SQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV-----------------LGWGNTYLLMAGLML 172 (402)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc-----------------cCHHHHHHHHHHHHH
Confidence 344566788999999999999999999999999999999988876532 148888888877665
Q ss_pred HHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy11785 85 LAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPK 164 (308)
Q Consensus 85 l~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~ 164 (308)
+..+..+..||..++ +++ + + +..++..+.+++++|||.++...+...+..........+.+.
T Consensus 173 ~~~l~~~~~~e~~~~--~~~-~-~--------------~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 234 (402)
T PRK11902 173 AGALTTLWAPEPEVP--ARP-P-R--------------SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT 234 (402)
T ss_pred HHHHHHHhcCCCccc--ccc-c-c--------------hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 554444444432111 000 0 0 000123456778999998877666555544443333445666
Q ss_pred HHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 165 YFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 165 yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|+++++|+++.+.+++.+...+.+.++|.+++|++.||++++
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 788889999999998875544445688999999999999754
No 28
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.46 E-value=3.2e-13 Score=130.09 Aligned_cols=186 Identities=19% Similarity=0.204 Sum_probs=121.7
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++|+++|+++++++.....+|+++||.+++++.+.+ + |+..|.+.+.
T Consensus 103 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------~------w~~~f~~~~~ 164 (485)
T TIGR00711 103 GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY------------H------WRWIFLINVP 164 (485)
T ss_pred hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc------------C------ceehhhhhhH
Confidence 556677889999999999999999999999999999999999999987643 2 4344544444
Q ss_pred HHHHHHH-HHHhccCCCCCCCCccCCccc-----------ccCCCccccccCCC---------------------CCCcc
Q psy11785 82 FLMLAAV-AMFMFPKTLTKASPVNGTTTV-----------ATLPTKKESNQKNP---------------------SLKDF 128 (308)
Q Consensus 82 ~~ll~~i-~~~~~p~~~p~~~~~~~~~~~-----------~~~~~~~~~~~~~~---------------------~~~~~ 128 (308)
+.++..+ .++.+|++.++.+++...... ....+..++..... ..++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDN 244 (485)
T ss_pred HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3333332 233445432221111000000 00000000000000 00000
Q ss_pred hHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 129 PKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 129 ~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+....+++|||.++...+..++.....++...++|.|+++.+|+++.+++++..... .+.+++.++.|++.||+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~ 321 (485)
T TIGR00711 245 PLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG-LAPMLSSPIAGRMGDKIDPR 321 (485)
T ss_pred CccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcCcH
Confidence 111246889999988888888888888999999999999999999999998775543 34678899999999999864
No 29
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.46 E-value=1.1e-12 Score=121.65 Aligned_cols=183 Identities=14% Similarity=0.167 Sum_probs=114.2
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHH-HHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGL-VLVAVFLM 84 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~f-ii~g~~~l 84 (308)
.++...+++.|++|+++|++++++......+|.++|+.+++.+...+.+-. .+....+ |+..| ++.++..+
T Consensus 107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~--~~~~~~~------w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGA--GLPAHLA------WGWAFVIVPAGILL 178 (366)
T ss_pred hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc--ccccccc------ccchhHHHHHHHHH
Confidence 345678899999999999999999998888888888888877765432210 0001112 33334 33233333
Q ss_pred HHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 85 LAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 85 l~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
+..+. +...+++ |++++++.+.+ .+.+.... .++..+..++++++|.++...+.........+++.+++|
T Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (366)
T TIGR00886 179 LPALLIFFVGADT-PPGKPATGKLS-----FKGARWSV---GTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFA 249 (366)
T ss_pred HHHHHHHHhcccC-Ccccccchhcc-----cccccccc---cchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 33333 3333443 22211110000 00000000 011122457788999888887777777777888999999
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++.+|+++.+++++.....+ ..+++.+++|++.||++.|
T Consensus 250 ~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~r~g~~ 291 (366)
T TIGR00886 250 MFFKDQFGLSKVTAGAYASLGGL-LGSLARPLGGAISDRLGGA 291 (366)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHH-HHHHHhhccchHHHhhccc
Confidence 99999999999999976654433 4577889999999999865
No 30
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=8.2e-13 Score=128.49 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=117.5
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+...+...+++.|++|+++|+++.++...+..+|.++|+.+++++.+.+ .+|+..|.+.+++.
T Consensus 122 a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-----------------~GWr~~f~i~a~l~ 184 (491)
T PRK11010 122 ASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY-----------------LGWQGMYWLMAALL 184 (491)
T ss_pred HHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------cCHHHHHHHHHHHH
Confidence 3444566788999999999999999999999999999999999887621 14888898888776
Q ss_pred HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
++..+..+..||.. + ++++ + + + .+ +.....++++++++.++...+...+.....+...++.|
T Consensus 185 ll~~l~~~~~~e~~-~-~~~~-~-~----------~-~~---~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~ 246 (491)
T PRK11010 185 IPCIIATLLAPEPT-D-TIPV-P-K----------T-LE---QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTT 246 (491)
T ss_pred HHHHHHHHhcCCCc-c-cccc-c-c----------c-hh---hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554444444421 1 1000 0 0 0 00 01223456777777665555444555555666677889
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++++|+++.+.+++.+.....+.++|.+++|+++||++++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~ 289 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF 289 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9998889999999998765454557789999999999999854
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.45 E-value=9.8e-13 Score=124.32 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=117.7
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...+...+++.|.+|+++|.+.+++......+|..+||.+++++.+.+ +|+..|++.++.
T Consensus 115 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------~w~~~~~~~~~~ 176 (406)
T PRK15402 115 LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL------------------PWRGMFVLFAAL 176 (406)
T ss_pred hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------CccHHHHHHHHH
Confidence 34456778899999999999999999998888899999999999887632 255556666655
Q ss_pred HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++..+.. +..|++.+ .+.+ +.+.++..+..+++++||.++...+...+.......+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (406)
T PRK15402 177 AALSFFGLWRAMPETAG----RVGE---------------KLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIAL 237 (406)
T ss_pred HHHHHHHHHHhCCCCCc----cccc---------------cccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444333 23333211 0000 0011234456678999999988877777776667778888
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|.|+++++|+++.+.++...... .+.++|.++.|++.||++.+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~-~~~~~g~~~~g~l~~r~~~~ 281 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVF-GALIAGNLTLARLTSRRPLR 281 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHH
Confidence 999999999999998887654333 35678889999999998754
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.44 E-value=1.5e-12 Score=126.22 Aligned_cols=176 Identities=12% Similarity=0.108 Sum_probs=119.1
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAV 88 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i 88 (308)
....++.|++|+++|++++|+......+|.++|+++.+.+.....+.. . + .. .+||..|++.+++.++..+
T Consensus 143 ~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~------~-~-~~-~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 143 SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG------A-P-SF-TAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------C-c-ch-hhhHHHHHHHHHHHHHHHH
Confidence 345678999999999999999988777788888777765543221100 0 0 01 1488888888888777776
Q ss_pred HHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11785 89 AMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFET 168 (308)
Q Consensus 89 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~ 168 (308)
.+++++++.|+...++.. + +. +.. .++..+.+++.++++.++...+...+.....+++.+++|.|+++
T Consensus 214 ~~~~~~~~~p~~~~~~~~-------~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 281 (476)
T PLN00028 214 LVLTLGQDLPDGNYRELK-------K-SG-TMP---KDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD 281 (476)
T ss_pred HHHHHcCcCCCCchhhHH-------h-cC-ccc---cccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 666677665543211000 0 00 000 01223456778889988777766666666667788899999999
Q ss_pred HhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 169 QFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 169 ~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++|++..+++.+.....+ +.++|.+++|++.||+++|
T Consensus 282 ~~g~s~~~a~~~~~~~~~-~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 282 RFGLSLETAGAIAASFGL-MNLFARPAGGYLSDVAARR 318 (476)
T ss_pred hcCCCHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHHHh
Confidence 999999999887655443 4678999999999998754
No 33
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.43 E-value=1.5e-13 Score=126.00 Aligned_cols=174 Identities=23% Similarity=0.359 Sum_probs=117.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++|+++|++++++...+..+|.++||.+++++.+.+ .|+..|++.++
T Consensus 98 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------~~~~~~~~~~~ 159 (352)
T PF07690_consen 98 GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF------------------GWRWAFLISAI 159 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC------------------HHCCHHHHHHH
T ss_pred ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc------------------ccccccccccc
Confidence 345677888999999999999999999999999999999999999987543 37677888777
Q ss_pred HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
+.++..+. .++++++.+++++.+.+ + ++ ++.+. +..+.++.++++|.++...+...........+..
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~-~-------~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPK-E-------SE-SKKPK---PLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSF 227 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SST-T-------TT---HHH---CCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhccccccccccc-c-------cc-ccccc---ccccccccccccchhhhhhhhhhHHHHHHHHhhc
Confidence 76666553 23444443322221110 0 00 00000 1111245666777665455555555667788999
Q ss_pred HHHHHHHHHhCCC-cccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLP-SHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls-~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++|.|+++.+|++ ..+++.+.+...+ ..+++.++.|++.||++.+
T Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ 273 (352)
T PF07690_consen 228 FLPLYLQEVLGFSGPSQAGLLFSIFGI-VGIIGSLLAGRLSDRFGRR 273 (352)
T ss_dssp HHHHHCCHHHHCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTCH
T ss_pred ccchhhhhccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCcH
Confidence 9999999999999 7888866655443 3456688999999998764
No 34
>KOG2533|consensus
Probab=99.43 E-value=3e-13 Score=130.65 Aligned_cols=186 Identities=16% Similarity=0.148 Sum_probs=136.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
-++..+|.-..++..|+.++||++.+|++++...+|.++|.++...+.++.... . ..+|+..|++-|+
T Consensus 147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~------~------~~gW~~~FiI~G~ 214 (495)
T KOG2533|consen 147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG------G------LAGWRWLFIIEGV 214 (495)
T ss_pred HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC------C------cCCceeehhHHHH
Confidence 367889999999999999999999999999999999999999998876532110 0 1247778999999
Q ss_pred HHHHHHHHH-HhccCCCCCCCCccCCcccc----cCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVA----TLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIA 156 (308)
Q Consensus 82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 156 (308)
+.++.++.. +++|.. |++.+...++|.. ..++.+. ...+++ .-+..+++.++.|..+..++..++.....+
T Consensus 215 i~~~~gi~~f~~lp~~-P~~~~fl~~~ek~~~~~~~~~~~~-~~~~~~--~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~ 290 (495)
T KOG2533|consen 215 ITLVLGIVVFFFLPDN-PSKAWFLTDEEKELVVERLRESPS-GGIENK--FKWKGFKEALKDPGVWPFSLCYFFLKLVNY 290 (495)
T ss_pred HHHHHHheEEEEecCC-hhhccccchHHHHHHHHHHHhccC-CCcccc--cCHHHHHHHHhchhHHHHHHHHHHHhhccc
Confidence 998888764 455554 4433222211110 0000000 000111 124567899999999999999999999999
Q ss_pred HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
++.+|+|.|+.+..|+|..+++.+....-+ +.++|.++.|+++||++
T Consensus 291 ~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~-~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 291 GFSYWLPLYLKSNGGYSELQANLLSTPYDV-GGIVGLILAGYLSDRLK 337 (495)
T ss_pred cHHHHHHHHHHcCCCcChHHhccccchHHh-hhHHHHHHHHHHHHHHh
Confidence 999999999998677999999887655443 56889999999999976
No 35
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.43 E-value=1.3e-12 Score=124.30 Aligned_cols=161 Identities=14% Similarity=0.225 Sum_probs=114.9
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+...+...+++.|.+++++++++++++.....+|+++||++|+++.+.+ +|+..|++.++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------------------gw~~~f~~~~~~~ 180 (413)
T PRK15403 119 CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------------------HWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------CHHHHHHHHHHHH
Confidence 3344566788999999999999999999999999999999999887532 3777788777765
Q ss_pred HHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 84 MLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 84 ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
++..+. ++.+||+.++++ + + ...++..+.+++++|||.++...+...+....++++.++.
T Consensus 181 ~i~~~~~~~~lp~~~~~~~--~---~--------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~ 241 (413)
T PRK15403 181 LIAFVGLLLAMPETVKRGA--V---P--------------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVS 241 (413)
T ss_pred HHHHHHHHHhCCCCccccC--C---C--------------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555443 334555422100 0 0 0011234567899999999988888888888888999999
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK 202 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r 202 (308)
|.|+++++|+++.++++...... .+.+++..+.+++.+|
T Consensus 242 P~~l~~~~g~s~~~~gl~~~~~~-~~~~i~~~l~~~~~~~ 280 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQVPVF-GAVIVANAIVARFVKD 280 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence 99999999999999988754332 2345555555554433
No 36
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=3.7e-12 Score=120.56 Aligned_cols=168 Identities=13% Similarity=0.127 Sum_probs=112.0
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHH-HHHHHHHHhhhcccccCCCCCCCCCCCCchhHH-HHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGP-SLGFILGSFCTRLYVDLSIPSDITPSDPRWIGA-WWLGLVLV 79 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp-~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~ga-Ww~~fii~ 79 (308)
|.+...+...+++.|++|+++|++++|+..++..+|. ++||++++++.+.+ .|... |+..+...
T Consensus 118 g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~--------------g~~~~~~~~~~~~~ 183 (402)
T TIGR00897 118 GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF--------------GEMNTLWSALAFVL 183 (402)
T ss_pred chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------------chHHHHHHHHHHHH
Confidence 3344455566778899999999999999999999997 68999999876532 12222 33322211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
+..+..+++.++.+++++++ + + .+.++..+.+++++|||.++...+...+.....+++.
T Consensus 184 -----~~~~~~~~~~~~~~~~~~~~-~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 184 -----TGGVIALFSNKDIFTPQHMQ-T------------R---EKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred -----HHHHHHHhccCCCCCccccc-C------------C---cchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 11122222222221111000 0 0 0112334456789999999888888888888889999
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+++|.|+++ +|+++.+++.+.+... .+.++|.++.|++.||+++|
T Consensus 243 ~~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~ 287 (402)
T TIGR00897 243 VFLPMFVAE-LGFSTSEWLQIWGTFF-FTNIVFNVIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHHHHH-cCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhcch
Confidence 999999865 8999999887665543 35688999999999999855
No 37
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.41 E-value=4e-12 Score=120.04 Aligned_cols=162 Identities=13% Similarity=0.115 Sum_probs=109.3
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|.+..++...+++.|++| ++|++++|++.++..+|+.+|+.+++++.+.+. . |+..+.+.+
T Consensus 109 ig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~-------------~----w~~~~~~~~ 170 (393)
T PRK09705 109 VGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE-------------T----WYQTLAWWA 170 (393)
T ss_pred hHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------C----HHHHHHHHH
Confidence 3566677888899999986 789999999999999999999999998876431 2 433333333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
+..++..+.++...++.|+++++ + +. + .++.++++.++...+...+.....+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~---------------~--~~---~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 226 (393)
T PRK09705 171 LPAVVALFAWWWQSAREVASSHK---------------T--TT---T----PVRVVFTPRAWTLGVYFGLINGGYASLIA 226 (393)
T ss_pred HHHHHHHHHHHHHhcCCCccccC---------------C--Cc---C----CcccccCHhHHHHHHHHHHHHHHHHHHHH
Confidence 33322222222222222211000 0 00 0 12345667666666666666777888999
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|+|.|+++ +|+++.+++.+.....+ +.++|.++.|++.||++++
T Consensus 227 ~lp~~l~~-~g~s~~~ag~~~~~~~i-~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 227 WLPAFYIE-IGASAQYSGSLLALMTL-GQAAGALLMPAMARHQDRR 270 (393)
T ss_pred HHHHHHHH-cCCChhhhhHHHHHHHH-HHHHHHHHHHHHHhhccch
Confidence 99999986 79999999987765544 6688999999999998765
No 38
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.41 E-value=1.7e-12 Score=138.00 Aligned_cols=170 Identities=14% Similarity=0.077 Sum_probs=124.6
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+++...|...+++.|+++++++++++|++.++..+|.++||++||+++..+ .|+..|++.++
T Consensus 121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~------------------~~~~~~~~~~~ 182 (1140)
T PRK06814 121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG------------------NFVILVALLMG 182 (1140)
T ss_pred HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc------------------ccHHHHHHHHH
Confidence 567788999999999999999999999999999999999999999998642 35655644433
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
..++..+..+.+|+..++....+. .....++....++.+.+||.++...+..++..+..+++.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1140)
T PRK06814 183 IAVLGWLASLFIPKTGNAAPDLKI---------------DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQ 247 (1140)
T ss_pred HHHHHHHHHhhCCCCCCCCCCCee---------------ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444443221111000 00001223345778899999999888888888888889999
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
+|.|+++.+|.++.++|++++...+ ++++|.++.|++.+|...
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~-g~~ig~~~~g~l~~~~~~ 290 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSV-GVAVGSFLASKLSEGRIT 290 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHH-HHHHHHHHHHHHhCCcee
Confidence 9999999999999999988766544 678889999999876543
No 39
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.41 E-value=2.8e-12 Score=120.53 Aligned_cols=165 Identities=16% Similarity=0.242 Sum_probs=115.2
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+.+..++...+++.|.+|+++|++.+++.+....+|+++||++++++.+.+ .|+..|.+.++
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~------------------g~~~~~~~~~~ 165 (392)
T PRK10473 104 GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF------------------PWQSLFYTMAA 165 (392)
T ss_pred hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc------------------ChHHHHHHHHH
Confidence 344556778899999999999999999999999999999999999876432 26666666665
Q ss_pred HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+. ++..||+.++. ++ + . ++..+..++.++|+.++...+...+.......+..
T Consensus 166 ~~~i~~~~~~~~~~~~~~~~----~~-~------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (392)
T PRK10473 166 MGILVLLLSLFILKETRPAR----AP-A------------A----SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVN 224 (392)
T ss_pred HHHHHHHHHHHHcCCCCCcc----cC-C------------c----cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444443 33444432111 00 0 0 01123446778898887666655555556667778
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.|.|+++++|+++.+.+.+.....+ ..+++.++.+++.||+++|
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~r~g~~ 269 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAG-VSMTVSFSTPFALGIFKPR 269 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHH
Confidence 88999999999999988876654433 4567888999999999854
No 40
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=3.7e-12 Score=118.37 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=115.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++++++|+++.++...+..+|+++|+++++.+.....+. ....| +|+..|++.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~--------~~~~~--~w~~~~~~~~~ 178 (394)
T TIGR00883 109 SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD--------ALLEW--GWRIPFLVSAV 178 (394)
T ss_pred hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------Hhhcc--chHHHHHHHHH
Confidence 456677888999999999999999999999999999999999988765422110 00112 47777777665
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChH--HHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDI--LMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~--f~~~~l~~~~~~~~~~~~~ 159 (308)
..++..+.....||+. +.++++ + ++ ++..+ ..+++++|+. ++...+...+.....+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~-~~~~~~---~-------~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (394)
T TIGR00883 179 LVLIGLYLRRNLEETP-VFEKAQ---E-------KH----KKKRG----PIRETLTKHRKPFLLGLGLVIATTTTFYLIT 239 (394)
T ss_pred HHHHHHHHHHhcCCCh-hHHHHH---h-------cc----ccccC----CHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 5443322222333321 110000 0 00 00011 1345555554 6666666667777788888
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+++|.|+++++|++..+++.+.....+ ..+++.+++|++.||+++|
T Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 285 (394)
T TIGR00883 240 TYLPTYLTQTLGLSANSALLVLMLSLI-LFFITIPLSGALSDRIGRR 285 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhchH
Confidence 999999999999999988876654433 4577888999999999855
No 41
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.39 E-value=2.7e-12 Score=124.77 Aligned_cols=186 Identities=10% Similarity=0.101 Sum_probs=110.5
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|.+..++.+.+++.|++|+++|+++.+++..+..+|+++|+.++..+.....+. ....| +||..|++.+
T Consensus 130 ~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~--------~~~~~--gWR~~f~i~~ 199 (490)
T PRK10642 130 FSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA--------NFLDW--GWRIPFFIAL 199 (490)
T ss_pred hHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------HhcCc--cHHHHHHHHH
Confidence 3567788999999999999999999999999888888888887776654321100 00122 4888888766
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhc-ChHHHHHH-HHHHHHHHHHHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLK-NDILMYRT-ASSVLHILPIAGL 158 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~-n~~f~~~~-l~~~~~~~~~~~~ 158 (308)
++.++..+....+||+ |+..+.+.+.+. ...+.. .+. . +. .++++++ ++..+... ...++....++++
T Consensus 200 ~~~l~~~~~~~~~~es-p~~~~~~~~~~~----~~~~~~-~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (490)
T PRK10642 200 PLGIIGLYLRHALEET-PAFQQHVDKLEQ----GDREGL-QDG-P-KV--SFKEIATKHWRSLLTCIGLVIATNVTYYML 269 (490)
T ss_pred HHHHHHHHHHHcCCCC-hhHHHHHHhhhh----hccccc-ccc-c-cC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 5444322222233332 221100000000 000000 000 0 00 1234443 33322222 2233455678889
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
.+|+|.|+++.+|++..++++.... ...+.+++.+++|++.||+++|.
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIA-IMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHH
Confidence 9999999999999998877665433 34456788889999999998763
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.38 E-value=6.2e-12 Score=118.85 Aligned_cols=158 Identities=16% Similarity=0.174 Sum_probs=109.8
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+.+..+|...+++.|++|+++|+++++++.+...+|.++||.+++++.+.+ +|+..|.+.++
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~------------------gw~~~f~~~~~ 182 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI------------------GWRNVFNAAAV 182 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------CHHHHHHHHHH
Confidence 345567888999999999999999999999999999999999999987643 26666766665
Q ss_pred HHHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
+.++..+.+. ..|+ .++++ + + ..+..++++|||.++...+..+......+++.+
T Consensus 183 l~~~~~l~~~~~~p~----~~~~~---~--------------~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T PRK10213 183 MGVLCIFWIIKSLPS----LPGEP---S--------------H----QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFT 237 (394)
T ss_pred HHHHHHHHHHHHCCC----CCccc---c--------------c----chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444332222 2222 11100 0 0 011245788999988776666666666777777
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF 203 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~ 203 (308)
+++.++.+++|+++.+++++.....+ +.++|.++.+++.||.
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~-~~iig~~~~~~l~~r~ 279 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGI-ASFVGTSLSSFILKRS 279 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence 87554556789999998886654433 5677788888888884
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=99.38 E-value=5.2e-12 Score=121.15 Aligned_cols=187 Identities=12% Similarity=0.164 Sum_probs=120.2
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC---CCCCCC---CCchh--HHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIP---SDITPS---DPRWI--GAWW 73 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~---~~~~~~---~~~W~--gaWw 73 (308)
|.+...+...+++.|..++++|.+.++++.....+|+.+|+++|+.+.........+ ..+..+ .+||. ..|+
T Consensus 130 g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~ 209 (438)
T PRK10133 130 GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQ 209 (438)
T ss_pred HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHH
Confidence 455667778888889877777777899999999999999999998776321100000 000001 23332 4688
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHH
Q psy11785 74 LGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHIL 153 (308)
Q Consensus 74 ~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~ 153 (308)
..|+..+.+..+..+.+.. +..|+.+.++.+ + + +.++..+..++++|||.++...+..++...
T Consensus 210 ~~f~~~~~v~~~~~~~~~~--~~~p~~~~~~~~----------~-~----~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 272 (438)
T PRK10133 210 TPYMIIVAIVLLVALLIML--TKFPALQSDNHS----------D-A----KQGSFSASLSRLARIRHWRWAVLAQFCYVG 272 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH--hcCCCCCccccc----------c-c----cccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence 8886544333322222211 222221110000 0 0 011234456789999998877777777777
Q ss_pred HHHHHHhHHHHHH-HHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 154 PIAGLYTFLPKYF-ETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 154 ~~~~~~~~~P~yl-~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..++...|+|.|+ |+.+|+++.++++.+....+ ++++|.+++|++.||+++|
T Consensus 273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~-~~~vG~~~~g~l~~r~g~~ 325 (438)
T PRK10133 273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV-CFFIGRFTGTWLISRFAPH 325 (438)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHH
Confidence 7788888999995 67899999999987765544 6789999999999999754
No 44
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.38 E-value=5.7e-12 Score=115.50 Aligned_cols=194 Identities=13% Similarity=0.127 Sum_probs=130.1
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+.+.+...+|+.|..++|++++.+++..+...+|..+||++++.++..... +........+ .....|+..|++.++
T Consensus 23 G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~-~~~~~~~~~~-~~~~~~~~~yl~ia~ 100 (310)
T TIGR01272 23 GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAG-DLSMQVATAN-AEAAKVHTPYLLLAG 100 (310)
T ss_pred hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCc-chhhhhhhhh-HHHHHHHHHHHHHHH
Confidence 66778889999999999999999999999999999999999999988743210 0000000000 112348888887776
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
+.++..+.+.+.+ .|+.+++..++. . + ++.. + .++++++|.++...++.++...+-.++..|
T Consensus 101 ~~~~~~i~~~~~~--~p~~~~~~~~~~--------~-~--~~~~-~----~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w 162 (310)
T TIGR01272 101 ALAVLAIIFAFLP--LPELQEADVARV--------S-S--GDTT-Q----KTSAFQFTHLVLGALGIFVYVGAEVSAGSF 162 (310)
T ss_pred HHHHHHHHHHHcc--CCCCCccccccc--------c-c--cccc-c----hhhHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555555444432 333211110000 0 0 0000 1 134677888888888888877788899999
Q ss_pred HHHHHHH--HhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785 162 LPKYFET--QFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA 218 (308)
Q Consensus 162 ~P~yl~~--~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~ 218 (308)
+|.|+++ ++|+++.++++..+.. ..++++|.++++++.||++.+ +.++++.+..
T Consensus 163 ~~~yl~~~~~~g~s~~~a~~~~s~~-~~~~~iGr~~~~~l~~r~g~~--~~l~~~~~l~ 218 (310)
T TIGR01272 163 LVNFLSDPHALGLPEDQAAHFTAYT-WGGAMVGRFIGSAVMPMISQG--RYLAFNAFLA 218 (310)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHH
Confidence 9999985 4799999999887654 456789999999999999844 4444444333
No 45
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.38 E-value=8.8e-12 Score=117.10 Aligned_cols=160 Identities=15% Similarity=0.274 Sum_probs=111.2
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...+...++++|++++++|+++++++.++..+|..+||.+++++.+.+ +|+..|.+.++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------gwr~~f~~~~~~ 166 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------------------SWRYTFLLIAVF 166 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------------------cHHHHHHHHHHH
Confidence 44556777888999999999999999999999999999999999886532 266667766665
Q ss_pred HHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++..+. ++..|+. ++++ + . +. +...+.+||+.++...+...+.....+.+.++
T Consensus 167 ~~~~~~~~~~~lp~~----~~~~-~----------------~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (382)
T PRK10091 167 NIAVLASIYFWVPDI----RDEA-K----------------G---GL-REQFHFLRSPAPWLIFAATMFGNAGVFAWFSY 221 (382)
T ss_pred HHHHHHHHHHhCCCC----Cccc-c----------------c---CH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333 2334432 1100 0 0 00 11234567777766655555555566666778
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|.|+++++|+++.+++++.....+ +.++|.++.|++.||++.+
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~~r~~~~ 265 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGL-GMVLGNLLSGRLSGRYSPL 265 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHhHHHheeccccCch
Confidence 8889998899999999987655443 5688999999999999754
No 46
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=1.2e-11 Score=116.74 Aligned_cols=163 Identities=10% Similarity=0.148 Sum_probs=111.0
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..++...+++.|++|+++|++.++.......+|..++|.+.++++..+ ..|+..|.+.+++
T Consensus 109 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----------------~gw~~~f~~~~~~ 171 (394)
T PRK03699 109 SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS-----------------IEWYWVYACIGLV 171 (394)
T ss_pred hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------ccHHHHHHHHHHH
Confidence 45566778899999999999999999998888999999999988876422 1377777776665
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.++..+..+ + ++.|+.++++. + +++ +..+ + ..++.++...+..++.....+++..|+
T Consensus 172 ~~~~~~~~~-~-~~~p~~~~~~~--~--------~~~---~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T PRK03699 172 YVAIFILTL-F-SEFPALGKHAP--K--------ADK---PVAK-------E-KWGIGVLFLAIAALLYILAQLTFISWV 228 (394)
T ss_pred HHHHHHHHH-h-cCCccccccCc--c--------ccC---cccc-------c-cCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554433332 2 22232111100 0 000 0000 1 113455555566666666777889999
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|.|+++++|+++.+++.+.+... .+..+|.+++|++.||+++|
T Consensus 229 p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~ 271 (394)
T PRK03699 229 PEYAQKKFGMSLEDAGNLVSNFW-MAYMVGMWIFSFIVRFFDLQ 271 (394)
T ss_pred HHHHHHHcCCChHHhhHHHHHHH-HHHHHHHHHHHHHHHHhchh
Confidence 99999999999999998776543 35688999999999999865
No 47
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=5.7e-12 Score=119.63 Aligned_cols=161 Identities=13% Similarity=0.071 Sum_probs=110.9
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML 85 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll 85 (308)
..+...+++.|++|+++|+++.++..+...+|.++||.+++++.+.+ .|+..|++.++..++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~------------------~~~~~~~~~~~~~~~ 188 (417)
T PRK10489 127 GVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG------------------GVAWNYGLAAAGTFI 188 (417)
T ss_pred HHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH------------------hhHHHHHHHHHHHHH
Confidence 34556788899999999999999999999999999999999987632 254556666555555
Q ss_pred HHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785 86 AAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY 165 (308)
Q Consensus 86 ~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y 165 (308)
..+.++.+|+..++. + +++ ...++..+.++.+++||.+....+...+. ....++.+++|.|
T Consensus 189 ~~~~~~~l~~~~~~~-~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~ 249 (417)
T PRK10489 189 TLLPLLRLPALPPPP-Q---PRE--------------HPLRSLLAGFRFLLASPVVGGIALLGGLL-TMASAVRVLYPAL 249 (417)
T ss_pred HHHHHHhCCCCCCCC-c---ccc--------------cchHHHHHHHHHHHcChHHHHHHHHHHHH-HHHHhHHHhhHHH
Confidence 555555555432211 0 000 01123334566788898876555544433 2346778899999
Q ss_pred HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 166 FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 166 l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
+++.+|+++.++|++.+... .+.++|.++++++.||.+
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~-~g~~ig~~~~~~l~~~~~ 287 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVP-LGAALGALTSGWLAHSAR 287 (417)
T ss_pred HHhccCCChhHhHHHHHHHH-HHHHHHHHHHHHhhhccC
Confidence 99999999999988765543 356778888899888744
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=4.3e-12 Score=119.25 Aligned_cols=176 Identities=16% Similarity=0.115 Sum_probs=119.9
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.++..|...++.+|+ +++|++.+|.......+|.++||+++|++.+.+ +|+..|.+.+++
T Consensus 108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~------------------g~~~~f~~~~~~ 167 (382)
T TIGR00902 108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF------------------DEQNILAILTAG 167 (382)
T ss_pred HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc------------------ChhHHHHHHHHH
Confidence 445677888887664 577899999999999999999999999998753 255556655444
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.++ .+..+.++++.+++++.+ + + ..+ ..+..++++|||.++...+..++.......+.++.
T Consensus 168 ~~~-~~~~~~~~~~~~~~~~~~---~----------~-~~~----~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 168 LAF-MLIGFLIKPTIPPKDAIP---E----------D-ESQ----GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS 228 (382)
T ss_pred HHH-HHHHHHcCCCCCCCcccc---c----------c-ccc----cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 222333333321111100 0 0 000 11235789999999988888888888899999999
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
|.|+++ +|.++.+.|++.+. ...+.+++.++.+++.||++.+ +.+.++.+...+.
T Consensus 229 ~~~l~~-~g~s~~~~g~l~~~-~~~~~i~~~~~~~~l~~r~g~~--~~l~~~~~~~~~~ 283 (382)
T TIGR00902 229 AIYWQA-AGISASATGLLWGI-GVLAEIIIFAFSNKLFQNCSAR--DLLLISAIACVGR 283 (382)
T ss_pred HHHHHH-CCCCHhHHHHHHHH-HHHHHHHHHHHhHHHHhhCCHH--HHHHHHHHHHHHH
Confidence 999986 89999999987764 3445567778889999998754 5555555444443
No 49
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=9.1e-12 Score=119.36 Aligned_cols=179 Identities=11% Similarity=0.120 Sum_probs=110.8
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|.+..+|.+.+++.|++|+++|+++.+....+..+|+.+|..++.++.....+. ....| +||..|++.+
T Consensus 137 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~--------~~~~~--gWr~~f~~~~ 206 (438)
T PRK09952 137 FAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE--------QFLSW--GWRIPFLFSI 206 (438)
T ss_pred hhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------Hhhcc--ChHHHHHHHH
Confidence 3567788888999999999999999999999999999999988887765432110 00112 4888888876
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHH-HHHHHHHHHHHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTA-SSVLHILPIAGLY 159 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l-~~~~~~~~~~~~~ 159 (308)
+..++. +. +++..|+.++..++++ + .+ + .+. +.+ ..+.++++|..+...+ ..++.....+.+.
T Consensus 207 ~~~l~~-~~---l~~~~~es~~~~~~~~-----~-~~-~-~~~---~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (438)
T PRK09952 207 VLVLIA-LW---VRNGMEESAEFEQQQH-----E-QA-A-AKK---RIP-VIEALLRHPGAFLKIIALRLCELLTMYIVT 270 (438)
T ss_pred HHHHHH-HH---HHHhCCCChhHHHHHh-----h-cc-c-ccc---cCC-HHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Confidence 654332 22 2233333221111000 0 00 0 000 111 1234667776665544 3444566778888
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|+|.|+++.+|++......+.... ....+++.++.|++.||+++|
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~-g~~~~i~~~~~g~l~Dr~grr 316 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLV-GGLSCLTIPCFAWLADRFGRR 316 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCch
Confidence 9999999999999887543222111 223466778899999999865
No 50
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.35 E-value=6e-12 Score=118.21 Aligned_cols=175 Identities=13% Similarity=0.063 Sum_probs=116.3
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...|...+++.|+ +++|++..+.......+|.++||++|+++.+.+ +|+..|.+.++.
T Consensus 108 ~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~------------------g~~~~f~~~~~~ 167 (382)
T PRK11128 108 FSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF------------------GEQAILWILTAG 167 (382)
T ss_pred HcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc------------------ChhHHHHHHHHH
Confidence 455667777777776 456788888888888999999999999998753 367777766654
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.++..+..+..|+..|+.++ + ++. ++..+.+++++|||.++...+..++......++.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~-----~----------~~~----~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 228 (382)
T PRK11128 168 VASMLLGQLLRPTIMPQGES-----R----------QQE----SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFS 228 (382)
T ss_pred HHHHHHHHHccCCCCCcccc-----c----------ccc----ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHH
Confidence 44433333333332111100 0 000 0111246789999999888777777777777888899
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL 220 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~ 220 (308)
|.|+++ .|++..+.|.+.+... .+.+++.++.|++.||++.+ +.+..+.+...+
T Consensus 229 ~~~~~~-~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~--~~l~~~~~~~~~ 282 (382)
T PRK11128 229 AIYWQA-AGYSASTIGYLWSLGV-VAEVLIFAFSNRLFRRWSAR--DLLLLSAICGVV 282 (382)
T ss_pred HHHHHH-CCCCHhHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHH
Confidence 999975 8999988888776443 35566778888999998754 444444443333
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.35 E-value=8.8e-12 Score=120.10 Aligned_cols=184 Identities=11% Similarity=0.093 Sum_probs=115.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++...++++|+++ ++|++++|+..++..+|.+++|.+++++.+.+ +|+..|++.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~------------------gwr~~f~~~~~ 181 (455)
T TIGR00892 121 GLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF------------------GWRGSFLILGG 181 (455)
T ss_pred cchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh------------------ChHHHHHHHHH
Confidence 344445666788899995 78999999999999999999999999887643 37778888877
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccc-cCCCCCCcchH-HHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESN-QKNPSLKDFPK-AVKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
+.++..+.++++.+..+..+..+.+.+....+....++ ..+...++..+ ...+++++|.++...++.++.....+...
T Consensus 182 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 261 (455)
T TIGR00892 182 LLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPI 261 (455)
T ss_pred HHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchH
Confidence 66554444333322211110000000000000000000 00000011111 11367899999888887777777778888
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+++|.|+++ +|++..+++++.+...+ +.+++.+++|++.||.+.+
T Consensus 262 ~~l~~~~~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~d~~~~~ 306 (455)
T TIGR00892 262 IFLVPYAKD-KGVDEYEAAFLLSIIGF-VDIFARPSCGLIAGLKWIR 306 (455)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccC
Confidence 899999976 79999999988765543 3466778889999985433
No 52
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=1.6e-11 Score=115.86 Aligned_cols=160 Identities=12% Similarity=0.110 Sum_probs=113.6
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+...+...+++.|+++++++++..+.......+|.++||.+++++.+.+ +|+..|.+.++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------g~~~~~~~~~~~~ 170 (401)
T PRK11043 109 CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF------------------GWQAIFATLFAIT 170 (401)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------------ChHHHHHHHHHHH
Confidence 3344556778899999999999999999899999999999999887643 3777777777666
Q ss_pred HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
++..+..+.++++.++++ + + +....+++++|+|.++...+...+....++.+.++.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~----~----------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 227 (401)
T PRK11043 171 LLLILPTLRLKPSKKARK----Q----------S---------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSP 227 (401)
T ss_pred HHHHHHHHHcCCCCCccc----c----------c---------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 665555555544322100 0 0 0123467888999887666665566667778888999
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++ +|+++.++++..... ..+.++|.++++++.||++.+
T Consensus 228 ~~~~~-~g~s~~~~g~~~~~~-~~~~~~g~~~~~~l~~r~~~~ 268 (401)
T PRK11043 228 FILEQ-MGYSPADIGLSYVPQ-TIAFLVGGYGCRAALQKWGGE 268 (401)
T ss_pred HHHHH-cCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHH
Confidence 98875 799999888755332 335577888889999998744
No 53
>TIGR00895 2A0115 benzoate transport.
Probab=99.34 E-value=7.6e-12 Score=116.52 Aligned_cols=185 Identities=13% Similarity=0.127 Sum_probs=111.3
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++...+++.|++|+++|++++++...+..+|.++|+.+++++.+.+ +|+..|.+.++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------g~~~~~~~~~~ 179 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF------------------GWRSLFYVGGI 179 (398)
T ss_pred ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc------------------cceeehhhhhh
Confidence 566778889999999999999999999999999999999999999887632 25555666554
Q ss_pred HHHHHHH-HHHhccCCCCCCCCccCCc--c----cc-c--CCC--c-cccccCCCCCCcchHHHHHhhcChHHHHHHHHH
Q psy11785 82 FLMLAAV-AMFMFPKTLTKASPVNGTT--T----VA-T--LPT--K-KESNQKNPSLKDFPKAVKRLLKNDILMYRTASS 148 (308)
Q Consensus 82 ~~ll~~i-~~~~~p~~~p~~~~~~~~~--~----~~-~--~~~--~-~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~ 148 (308)
..++..+ .++.+|+......+++.++ + .. . .+. . .+++..++..++..+..++..+++..+...+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR00895 180 APLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLY 259 (398)
T ss_pred HHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHH
Confidence 4333333 3344554422111110000 0 00 0 000 0 000000000111111122222233444444445
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+.....+....++| ++.+.+|+++.+++++..... .+.++|.+++|++.||++++
T Consensus 260 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 260 FMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFN-FGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcchH
Confidence 556667777888999 666778999999888765544 35688999999999999865
No 54
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=8.3e-12 Score=116.82 Aligned_cols=188 Identities=12% Similarity=0.117 Sum_probs=110.6
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++...+++.|++|+++|+++.++..+...+|.++|+.+++.+.+.+. . .|+..|++.++
T Consensus 113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~------------~----~w~~~f~~~~~ 176 (405)
T TIGR00891 113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG------------D----GWRALFFISIL 176 (405)
T ss_pred hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------c----cHHHHHHHHHH
Confidence 5567788889999999999999999999999999999999999998876431 0 26666766554
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCccc-ccCCCc-cccccCCCCCCcchHHHHHhhc-C-hHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTK-KESNQKNPSLKDFPKAVKRLLK-N-DILMYRTASSVLHILPIAG 157 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~Ll~-n-~~f~~~~l~~~~~~~~~~~ 157 (308)
..++..+.....|++.+..++++.+++. +...+. .+++..+...++.....++..+ + +.+....+...+......+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (405)
T TIGR00891 177 PIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHP 256 (405)
T ss_pred HHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 4443333333444432111100000000 000000 0000000001111111111111 1 1233333333344455566
Q ss_pred HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..+++|.|+++++|++..+++++.....+ +.++|.++.|++.||+++|
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~g~~ 304 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNI-GAIVGGCVFGFLGDWLGRR 304 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCch
Confidence 77889999999999999999987655443 5678999999999999865
No 55
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.33 E-value=1.5e-11 Score=130.68 Aligned_cols=183 Identities=15% Similarity=0.064 Sum_probs=120.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+.+...|...+++.|++|+++|++++|++.++..+|.++|+++|+++...+... .+....| .||..+++...
T Consensus 116 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~------~~~~~~~--~~~~~~~~~~~ 187 (1146)
T PRK08633 116 QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN------TPSEILG--RIAPAGLVLLA 187 (1146)
T ss_pred HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc------ccccccc--chHHHHHHHHH
Confidence 456677888999999999999999999999999999999999999987642100 0111111 12332332222
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
..++..+..+.+|+..+.... +.++ ......++....++.+++||.++...++.++.....+.+.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPE-VFDK------------KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQAN 254 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcc-cccc------------cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222333344443221111 0000 000111234456778899999888777777777777788899
Q ss_pred HHHHHHHHhCCCcc-cccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSH-TANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~-~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|.|+++.+|++.. +++++..... .+.++|.++.|++.||++.+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~-ig~~~g~~~~g~l~~r~~~~ 299 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASA-IGIGIGSLLAGRLSGRHIEL 299 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhCCceEc
Confidence 99999999999998 8888765543 45678889999999998654
No 56
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.32 E-value=2.8e-11 Score=112.24 Aligned_cols=161 Identities=14% Similarity=0.098 Sum_probs=109.9
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+...+...++++|.++ ++|+++++++..+..+|..+|+.+++.+.+.+. ..|+..|++.++..
T Consensus 102 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~----------------~~w~~~f~~~~~~~ 164 (355)
T TIGR00896 102 AIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG----------------GHWQQALAWWALPA 164 (355)
T ss_pred HHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------hhHHHHHHHHHHHH
Confidence 3445566778888885 689999999999999999999999998865320 13777777665543
Q ss_pred HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
++.. +..+|+..++.++ + ++ . . . ...++++|||.++...+...+.....+++.+|+|
T Consensus 165 ~~~~--~~~~~~~~~~~~~-----~-------~~-~---~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 221 (355)
T TIGR00896 165 LLAL--LAWIPQVRRRVAA-----N-------QT-T---T-R----LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLP 221 (355)
T ss_pred HHHH--HHHhhhhccccCC-----C-------CC-C---C-C----CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 2233433111100 0 00 0 0 0 0124667888887777666667777888899999
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+++ +|+++.+++++.....+ +.+++.++.|++.||++.+
T Consensus 222 ~~~~~-~g~~~~~~g~~~~~~~~-~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 222 AILIS-HGASAATAGSLLALMQL-AQAASALLIPALARRVKDQ 262 (355)
T ss_pred HHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhccc
Confidence 99986 69999999887765543 5688999999999999644
No 57
>PRK15075 citrate-proton symporter; Provisional
Probab=99.32 E-value=2.9e-11 Score=115.56 Aligned_cols=174 Identities=11% Similarity=0.199 Sum_probs=107.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++...+++.|++|+++|++++++......+|..+|+.+|+.+.....+. ....| +||..|++..+
T Consensus 130 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~--------~~~~~--gWr~~f~~~~~ 199 (434)
T PRK15075 130 SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA--------QMAEW--GWRIPFLIGCL 199 (434)
T ss_pred cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------HHhcc--chHHHHHHHHH
Confidence 455566777899999999999999999999988888888888888875432110 00011 37777765433
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHH-HHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYR-TASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~-~l~~~~~~~~~~~~~~ 160 (308)
.. +.+++.++..|+.++...+ + .+.+.++ .++++.+++..+.. .+...+.....++...
T Consensus 200 ~~----~~~~~~~~~~~e~~~~~~~-~------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (434)
T PRK15075 200 IV----PFIFLIRRSLEETEEFLAR-K------------HRPSMRE---IFRSLAANWRIVLAGMLMVAMTTVSFYLITV 259 (434)
T ss_pred HH----HHHHHHHHhcCCCHHHHHh-h------------hcccccc---HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1122233333322110000 0 0011112 23344556544433 2333345566778889
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|+|.|+++.+|++..+++++..... .+.+++.+++|++.||+++|
T Consensus 260 ~~p~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~Dr~g~r 304 (434)
T PRK15075 260 YTPTFGKTVLHLSAADSLLVTLCVG-VSNFIWLPIGGALSDRIGRR 304 (434)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch
Confidence 9999999999999988876554332 34578889999999999865
No 58
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=1.5e-11 Score=116.76 Aligned_cols=175 Identities=10% Similarity=0.120 Sum_probs=107.7
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++...+++.|++|+++|++++++..++..+|+++++.+++.+.+.+ +|+..|++.++
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~------------------~w~~~f~i~~~ 180 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY------------------GWRAAFFVGLL 180 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC------------------CHHHHHHHHHH
Confidence 456677888999999999999999999999999999999999988776532 26666655433
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHH---HHHHHHHHH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSV---LHILPIAGL 158 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~---~~~~~~~~~ 158 (308)
..++ . +++.+..|++++..+++. + ++. ++.+...++....+++++++|.+....+... ......+.+
T Consensus 181 ~~~~-~---~~~~~~~p~~~~~~~~~~-~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (426)
T PRK12307 181 PVLL-V---IYIRARAPESKEWEEAKL-S---GKG--KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPI 250 (426)
T ss_pred HHHH-H---HHHHHHCCCChHHHHhhh-h---ccc--cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 1 122222233221110000 0 000 0000011112235678888887754433222 222333446
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..++|.|+++ .|+++.+.+.+..... .+.++|.++.|++.||+++|
T Consensus 251 ~~~~~~~~~~-~g~~~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~~~~ 296 (426)
T PRK12307 251 FGLLPTYLAG-EGFDTGVVSNLMTAAA-FGTVLGNIVWGLCADRIGLK 296 (426)
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccH
Confidence 7789999986 5999888887655443 34678889999999999865
No 59
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=2.4e-11 Score=114.55 Aligned_cols=169 Identities=16% Similarity=0.158 Sum_probs=106.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+.+...+...+++.|++|+++|++++++++....+|..+++++++.+.+.+ .|+..|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 177 (406)
T PRK11551 116 GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA------------------AWRHIFYVGGV 177 (406)
T ss_pred hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc------------------CHHHHHHHHHH
Confidence 345566788899999999999999999999999999999999998775432 26666776665
Q ss_pred HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+. ++++|++.+ ..+.+.++ ++ .++..+...+..+++..+...+.........+.+..
T Consensus 178 ~~~~~~~~~~~~l~~~~~-~~~~~~~~--------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (406)
T PRK11551 178 GPLLLVPLLMRWLPESRA-FAQAAGAG--------KQ-------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLN 241 (406)
T ss_pred HHHHHHHHHHHhCCCChh-HHhccCcc--------hh-------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333 333454321 11110000 00 001111111111122222333334444556677888
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|+|.|+++ .|++..+++++..... .+.+++.++.|++.||++++
T Consensus 242 ~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~ 285 (406)
T PRK11551 242 WLPSLLVG-QGLSRSQAGLVQIAFN-IGGALGSLLIGALMDRLRPR 285 (406)
T ss_pred HHHHHHHh-CCCChhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhHH
Confidence 99999986 6999999988766544 35678899999999999754
No 60
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.29 E-value=3.6e-11 Score=110.98 Aligned_cols=166 Identities=14% Similarity=0.042 Sum_probs=107.8
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..++....++.+++| ++|+++.++..++..+|..+++.+.+.+.+.+ +|+..|++.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~f~~~~~~ 165 (377)
T TIGR00890 105 VGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE------------------GVPAAFIYMGII 165 (377)
T ss_pred HHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc------------------cHHHHHHHHHHH
Confidence 44455667778888886 67999999999999999887665555554321 377788888877
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.++..+..+.+.++.++++.++ +. + .++..+..++++|||.++...+..............+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~-~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKT-NI---------E-------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLY 228 (377)
T ss_pred HHHHHHHHHHheecCchhcccc-Cc---------c-------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHH
Confidence 6666655544444322211100 00 0 00111234678889888776666665555555566677
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|.|.+ .++++..+++++.....+ +.+++.++.|++.||+++|
T Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 270 (377)
T TIGR00890 229 KPYGQ-SLGLSDGFLVLAVSISSI-FNGGGRPFLGALSDKIGRQ 270 (377)
T ss_pred HHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Confidence 77765 478888887776554433 4578899999999999865
No 61
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=5.2e-11 Score=110.63 Aligned_cols=161 Identities=13% Similarity=0.116 Sum_probs=107.2
Q ss_pred ccccccchhhhcCccCCCCchhH--HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLY--FAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~--~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+...|...+++.|+.|+++|.+. .++......+|.++||.+++++.+.+ .|+..|++.++
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------------------~~~~~f~~~~~ 163 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF------------------GFTVMFLTAAL 163 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc------------------ccHHHHHHHHH
Confidence 44567778888898888777644 68888888999999999999887532 37778888777
Q ss_pred HHHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+.. +..|+. |+.++++ + . .++ .++++++|.++...+..+........+..
T Consensus 164 ~~~~~~~~~~~~~~~~-~~~~~~~---~------------~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSY-PRGAPGA---L------------T---RLE----VRGLLASRDTRLLFVACTLMWGCNILYII 220 (375)
T ss_pred HHHHHHHHHHHhCCCc-ccCcccc---c------------C---cch----hhhhhcCcchHHHHHHHHHHHHHHHHHHh
Confidence 655554443 335543 2111100 0 0 001 23356677666555555555555556677
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++|.|+++++|+++.+++++.+... ...+++.+++|++.||+++|
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~g~~ 265 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAA-GLEIPFMLLAGYLIKRFGKR 265 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHhHHHHHHHhcch
Confidence 8999999999999999887665432 23456778899999999865
No 62
>PRK10504 putative transporter; Provisional
Probab=99.26 E-value=3.3e-11 Score=116.16 Aligned_cols=182 Identities=13% Similarity=0.105 Sum_probs=117.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...|...+++.|++|+++|++++|+......+|.++||.++|++.+.+ +|+..|.+...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~------------------gw~~~f~~~~~ 172 (471)
T PRK10504 111 GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA------------------SWHWIFLINIP 172 (471)
T ss_pred hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc------------------cHHHHHHHHHH
Confidence 456677888999999999999999999999999999999999999987642 26566666554
Q ss_pred HHHHHHHHH-HhccCCCCCCCCccCCcccc-----------cCCCcccc-----------------------ccCCCCCC
Q psy11785 82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVA-----------TLPTKKES-----------------------NQKNPSLK 126 (308)
Q Consensus 82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~-----------~~~~~~~~-----------------------~~~~~~~~ 126 (308)
..++..+.. ...|+.. ...++....... ...+.+.. ++. ...+
T Consensus 173 ~~~l~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (471)
T PRK10504 173 VGIIGAIATLMLMPNYT-MQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR-NNNR 250 (471)
T ss_pred HHHHHHHHHHHhCCCcc-ccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 433333332 2333322 111110000000 00000000 000 0001
Q ss_pred cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+....+++|||.+....+..++..........+.|.|++.++|.++.+++++.... ..+.+++.++.|++.||+++|
T Consensus 251 --~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 251 --ALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPM-VLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred --CccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCch
Confidence 11124689999998888877777777777788999999999999999998776443 333455667889999999765
No 63
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.23 E-value=1.8e-10 Score=108.36 Aligned_cols=152 Identities=11% Similarity=0.051 Sum_probs=100.4
Q ss_pred cCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11785 15 DDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFP 94 (308)
Q Consensus 15 ~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p 94 (308)
.|..++++++.+.+....+..+|.++|..+.+++.+.+ +|+..|++.+++.++..+..++++
T Consensus 123 ~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~------------------gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 123 AEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF------------------GQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555555555555666666666666665532 388889988877766555555554
Q ss_pred CCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc
Q psy11785 95 KTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS 174 (308)
Q Consensus 95 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~ 174 (308)
++.+++++ .+ + ...+..++++|||.++...+..++.........++.|.|+++ .|+++
T Consensus 185 ~~~~~~~~----~~-------------~----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~ 242 (390)
T TIGR02718 185 DRAVASPE----AP-------------L----ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPL 242 (390)
T ss_pred CCCcCccc----cc-------------h----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCH
Confidence 43221100 00 0 011246788999987777666666667677788889999987 69999
Q ss_pred ccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 175 HTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 175 ~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++.|++.+...+...++|.+++|++.||++.+
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999876554556678889999999999854
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=1.4e-10 Score=109.39 Aligned_cols=158 Identities=12% Similarity=0.143 Sum_probs=101.6
Q ss_pred cccccchhhhcCccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRES--PLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~--~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
...|...+++.|+.++++| +++.++..++..+|.++||.+++++.+.+ +|+..|++.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~------------------gw~~~f~~~~~~ 182 (393)
T PRK15011 121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF------------------SFTVMYLSAAVA 182 (393)
T ss_pred hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc------------------ChHHHHHHHHHH
Confidence 4556777888888777655 45668889999999999999999987643 388888888777
Q ss_pred HHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcCh-HHHHHHHHHHHHHHHHHHHHh
Q psy11785 83 LMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKND-ILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 83 ~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~-~f~~~~l~~~~~~~~~~~~~~ 160 (308)
.++.+++++ ..|+. ++++++. + + + . +..+ +++ ..+...+.........+.+..
T Consensus 183 ~~~~~~~~~~~~~~~-~~~~~~~-~-~--------~---~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T PRK15011 183 FIVCGVMVWLFLPSM-RKELPLA-T-G--------T---L-EAPR----------RNRRDTLLLFVICTLMWGTNSLYII 237 (393)
T ss_pred HHHHHHHHHhhcCcc-CCCCccc-c-c--------c---c-cccc----------cccccHHHHHHHHHHHHHHHHHHHH
Confidence 666655544 34443 2111100 0 0 0 0 0000 111 111122222333344556677
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++|.|+++++|+++.+++++.+... ...+++.+++|++.||+++|
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~-~~~i~~~~~~G~l~dr~g~~ 282 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAA-GLEIPTMLIAGYFAKRLGKR 282 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhChH
Confidence 9999999999999999988765433 34567889999999999866
No 65
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.22 E-value=1.6e-10 Score=108.67 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=110.0
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+...+...+++.|.+++++++++.++...+..+|+.+||.+++++.+.+ +|+..|.+.++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------g~~~~f~~~~~~~ 172 (394)
T PRK11652 111 GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------------------GWRACYLFLLLLG 172 (394)
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------ChHHHHHHHHHHH
Confidence 3445566778889999999999999999999999999999999886532 2666666665554
Q ss_pred HHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 84 MLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 84 ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
++..+. .++.||+.+++ ++ + ++..+.+++++|||.++...+..+........+..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (394)
T PRK11652 173 AGVTFSMARWMPETRPAD-AR------------------R---TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACS 230 (394)
T ss_pred HHHHHHHHHhCCccCccc-cc------------------h---hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444333 33344431110 00 0 0123456788899988766665555555666677788
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
|.|+++.+|+++.+.+++... ..++.++|.++.+++.||++
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~g~~~~~~l~~~~~ 271 (394)
T PRK11652 231 GVLMGAVLGLSSMTVSILFIL-PIPAAFFGAWFAGRPNKRFS 271 (394)
T ss_pred hHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988876533 34566777777888888776
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.20 E-value=1.9e-10 Score=108.88 Aligned_cols=160 Identities=13% Similarity=0.156 Sum_probs=100.9
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
++...|...+++.|++|+++|++++|+......+|.++||.+++++.+ + +|+..|.+.++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~------------------g~~~~f~~~~~~ 173 (400)
T PRK11646 113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y------------------DFRLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h------------------hHHHHHHHHHHH
Confidence 344556778899999999999999999999999999999999999873 2 366666666655
Q ss_pred HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
.++.++.. +..|+. +..+. .++..+.++++++||.++...+..............+
T Consensus 174 ~~~~~i~~~~~~~~~----~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (400)
T PRK11646 174 FVLAAAFNAWLLPAY----KLSTV-------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLM 230 (400)
T ss_pred HHHHHHHHHHhCCcc----ccccc-------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 54444332 233321 00000 0012234678889998876655544444444455678
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
+|.|+++..+ ++.+.+++.+...+....+...++++..||++.
T Consensus 231 ~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~ 273 (400)
T PRK11646 231 LPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRL 273 (400)
T ss_pred hhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 9999988766 667777665443333333333444444455543
No 67
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=4.7e-11 Score=113.63 Aligned_cols=186 Identities=14% Similarity=0.116 Sum_probs=105.9
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHH---HhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILG---SFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV 77 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lG---g~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi 77 (308)
+|.+..++...+++.|++|+++|+++++++.++..+|.++|++++ +..... .+|+..|.
T Consensus 139 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~------------------~~w~~~f~ 200 (481)
T TIGR00879 139 IGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT------------------LGWRIPLG 200 (481)
T ss_pred hhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC------------------ccHHHHHH
Confidence 356677888999999999999999999999999999999999998 332221 13666777
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC--CCccCC-cc-cccC-CCcccccc--------------CCCCCCcchHHHHHhhc-
Q psy11785 78 LVAVFLMLAAVAMFMFPKTLTKA--SPVNGT-TT-VATL-PTKKESNQ--------------KNPSLKDFPKAVKRLLK- 137 (308)
Q Consensus 78 i~g~~~ll~~i~~~~~p~~~p~~--~~~~~~-~~-~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~Ll~- 137 (308)
+.++..++..+..+++|++.+.. +++.++ .+ .... ....++.. .....+...+..++..+
T Consensus 201 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (481)
T TIGR00879 201 LQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRR 280 (481)
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCch
Confidence 75555554444455556542110 000000 00 0000 00000000 00000001122233322
Q ss_pred --ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 138 --NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 138 --n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+.++...+..+........+..+.|.+++ ++|++..++++...... ...+++.+++|++.||+++|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~ 349 (481)
T TIGR00879 281 IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVG-AVNFAFTFVAIFLVDRFGRR 349 (481)
T ss_pred hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch
Confidence 334444444444444444556667787765 57998877766554333 34578899999999999865
No 68
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=1.5e-10 Score=112.91 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=111.8
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCC-------CCCCCCchhHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD-------ITPSDPRWIGAWWL 74 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~-------~~~~~~~W~gaWw~ 74 (308)
|.+..++...+|+.|++|+++|++++++.+....+|..+|+.++.++...+.+....++ ....+..| +||.
T Consensus 128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~WR~ 205 (502)
T TIGR00887 128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY--MWRI 205 (502)
T ss_pred HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc--cHHH
Confidence 45667788999999999999999999999999999999999999877543321000000 00001123 4888
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCC--CCCccCC--cc-cc-----cCCCcccc-ccCCCCCCcchHHHHHhhcC----h
Q psy11785 75 GLVLVAVFLMLAAVAMFMFPKTLTK--ASPVNGT--TT-VA-----TLPTKKES-NQKNPSLKDFPKAVKRLLKN----D 139 (308)
Q Consensus 75 ~fii~g~~~ll~~i~~~~~p~~~p~--~~~~~~~--~~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~Ll~n----~ 139 (308)
.|.+.++..++..+..+++||+..- .+.++++ ++ .. ..++..++ ++.++..++....+++++++ +
T Consensus 206 ~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (502)
T TIGR00887 206 LIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWR 285 (502)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhH
Confidence 8877777666655555666765321 1111100 00 00 00000000 00000000011134455542 1
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccccccc-----------chhhhhhhhHHHhhhhheehhhccC
Q psy11785 140 ---ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV-----------SGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 140 ---~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~-----------~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
..+...+..+......++...|.|.+++ +.|++..+++.. ...+...+.++|.+++++++||+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gR 364 (502)
T TIGR00887 286 HGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGR 364 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 1122222233344566778888999996 578876543311 1111222345678889999999997
Q ss_pred Ccc
Q psy11785 206 NAR 208 (308)
Q Consensus 206 ~~~ 208 (308)
|..
T Consensus 365 R~~ 367 (502)
T TIGR00887 365 KPI 367 (502)
T ss_pred hhH
Confidence 643
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.19 E-value=2.7e-10 Score=108.35 Aligned_cols=183 Identities=10% Similarity=0.124 Sum_probs=117.2
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccC-CCC--CCCCCC------CCchhHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL-SIP--SDITPS------DPRWIGAW 72 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~-~~~--~~~~~~------~~~W~gaW 72 (308)
|.+...+...+++.+..|+++|++.+++.+....+|..+||++++.+.....+. ..+ ....+. +.++ ..|
T Consensus 107 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w 185 (410)
T TIGR00885 107 GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL-ASV 185 (410)
T ss_pred hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH-HHH
Confidence 445566777788889999999999999999999999999999999886431110 000 000000 0122 359
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785 73 WLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI 152 (308)
Q Consensus 73 w~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~ 152 (308)
|..|++.+++.++..+.+.+. +.|+.++.+ + + +. +.....++++|||.++...++.++..
T Consensus 186 ~~~fl~~a~~~~~~~~~~~~~--~~p~~~~~~---~--------~----~~---~~~~~~~~~~~~~~~~~~~l~~f~yv 245 (410)
T TIGR00885 186 QTPYMIIGAVVLAVALLIMLT--KMPALNHSD---A--------K----QI---SFSASLSRLARIRHYREGVIAQFFYV 245 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--cCCCCCccc---c--------c----cc---cchhhHHHHHhChhHHHHHHHHHHHH
Confidence 999998887666554433322 233211100 0 0 00 11123457889999988888877777
Q ss_pred HHHHHHHhHHHHHHHHHh-CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 153 LPIAGLYTFLPKYFETQF-RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 153 ~~~~~~~~~~P~yl~~~~-gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..-.+..++++.|+++.. +.+...++.+.... .....+|.++++++.||++.|
T Consensus 246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~-~~~~~vGR~~~~~l~~r~~~~ 299 (410)
T TIGR00885 246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGA-MVIFFISRFIGTWLISYLAAH 299 (410)
T ss_pred HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHH
Confidence 777788899999998643 45555444333332 345688999999999998654
No 70
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.19 E-value=1.7e-10 Score=108.29 Aligned_cols=158 Identities=16% Similarity=0.164 Sum_probs=100.8
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..+|...+.+.|..++++|+++++++.+...+|+++||.+++.+.+.+. |...|+..++..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~--------------~~~~~~~~~~~~~-- 171 (381)
T PRK03633 108 CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM--------------SVLPWVTGLVLAA-- 171 (381)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc--------------chHHHHHHHHHHH--
Confidence 344556666777788899999999999999999999999999998865321 1123443322211
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.+++++.+.+ ++ +.++ + + .++ .++++|||.++...............+.+++
T Consensus 172 ----~~~~~~~~~~-~~-~~~~--------------~---~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 172 ----ILPLLFTRIL-NQ-QAEN--------------H---D-STS----IWPMLKLRQARLGVNGCIISGIVLGSLYGLM 223 (381)
T ss_pred ----HHHHHHhccc-CC-CCCC--------------C---C-CCC----HHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 11 0000 0 0 011 3456788887765544444445556677889
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
|.|+++ .|.++.+++++..... .+.+++.++.|++.||++.+
T Consensus 224 p~~~~~-~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 224 PLYLNH-QGMSDASIGFWMALLV-SAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHH-HHHHHHHhhhHHHHHHcCcH
Confidence 999986 5999988887665433 45678889999999999865
No 71
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.18 E-value=4.3e-10 Score=107.96 Aligned_cols=178 Identities=13% Similarity=0.008 Sum_probs=110.3
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc-----ccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR-----LYVDLSIPSDITPSDPRWIGAWWLGLVL 78 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~-----~~v~~~~~~~~~~~~~~W~gaWw~~fii 78 (308)
+..++.+...+.+++|+++|++++|+......+|..++++++..+.. .+.. .... ..-.+.. +|+..+++
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~-~~~~-~~~g~~~---~~~~~~~~ 216 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGV-NGVP-QADGSVM---SLANAAWI 216 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc-cccc-ccccchH---HHHHHHHH
Confidence 44678889999999999999999999976667777666666554332 1211 0000 0000111 25555555
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785 79 VAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGL 158 (308)
Q Consensus 79 ~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~ 158 (308)
..++.++.++..+++.++.++. + .-.+..+.++|||..|..++..++.+..+.++
T Consensus 217 ~~~~~iv~~i~~~~~~~~~~~~---~----------------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~ 271 (462)
T PRK15034 217 WVPLLAIATIAAWSGMNDIASS---R----------------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGF 271 (462)
T ss_pred HHHHHHHHHHHHHHhCCCcccc---c----------------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHH
Confidence 5555555555544443322210 0 11234567899999999999999999999999
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI 216 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~ 216 (308)
..++|.|+++++.- ..+ +....+......+..+++|++.||++.+ +.+.++.+
T Consensus 272 s~~lp~~~~~~~~~--~~~-l~~~~l~~l~~~l~rplgG~LADRiG~~--~vl~~~~i 324 (462)
T PRK15034 272 SAGFAMLAKTQFPD--VNI-LRLAFFGPFIGAIARSVGGAISDKFGGV--RVTLINFI 324 (462)
T ss_pred HHHHHHHHHHHcCh--HHH-HHHHHHHHHHHHHHHHhhHHHHHhcCch--HHHHHHHH
Confidence 99999999998742 111 1111111223456778999999999865 44443333
No 72
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.17 E-value=1e-10 Score=112.78 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=63.1
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++.+.+++.|++|+++|++++++...+..+|.++++++++.+.....+ ... + .| +||..|++.++
T Consensus 133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-----~~~-~--~~--gWr~~f~~~~~ 202 (479)
T PRK10077 133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDA-----SWL-N--TD--GWRYMFASEAI 202 (479)
T ss_pred hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-----ccc-c--cC--ChHHHHHHHHH
Confidence 56777889999999999999999999999999999999999998877542110 000 1 11 37777887777
Q ss_pred HHHHHHHHHHhccCC
Q psy11785 82 FLMLAAVAMFMFPKT 96 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~ 96 (308)
..++..+..+++||+
T Consensus 203 ~~~~~~~~~~~l~~s 217 (479)
T PRK10077 203 PALLFLMLLYFVPET 217 (479)
T ss_pred HHHHHHHHHHcCCCC
Confidence 666665556666765
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.07 E-value=2.2e-09 Score=97.84 Aligned_cols=143 Identities=21% Similarity=0.332 Sum_probs=111.4
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
+.+...+...+++.|++|+|+|++.+++......+|..+||.+++.+.+.+ .|+..|.+.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 161 (352)
T cd06174 100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL------------------GWRWLFLILAI 161 (352)
T ss_pred ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHH
Confidence 556778888999999999999999999999999999999999999987642 26666666665
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
..++..+..++++ |.++...+...+.......+..+
T Consensus 162 ~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd06174 162 LGLLLALLLLFLL--------------------------------------------RLLLLLALAFFLLSFGYYGLLTY 197 (352)
T ss_pred HHHHHHHHHHHHH--------------------------------------------HHHHHHHHHHHHHHhHHHHHHHH
Confidence 5554444333322 34455556666777788889999
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
.|.++++.++.+..+.+....... .+..++.++.|++.||+++|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFG-LGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Confidence 999999998999999988765544 356788899999999998663
No 74
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.05 E-value=3.7e-09 Score=99.50 Aligned_cols=161 Identities=16% Similarity=0.157 Sum_probs=98.3
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML 85 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll 85 (308)
.++...+++.|++|+++|++++|+......+|.++||.+++.+.+.+ .|+..|.+.++..++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~ 184 (408)
T PRK09874 123 FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY------------------GLRPVFFITASVLFL 184 (408)
T ss_pred hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CHHHHHHHHHHHHHH
Confidence 45677788999999999999999999999999999999999887642 266667766665554
Q ss_pred HHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHH-HHHHHHHHHHHHHhHHH
Q psy11785 86 AAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTA-SSVLHILPIAGLYTFLP 163 (308)
Q Consensus 86 ~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l-~~~~~~~~~~~~~~~~P 163 (308)
..+..+ +.|++.++.++ + + +. + .+...+.++|+.++...+ ...........+..++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~-~---~-------------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T PRK09874 185 CFLVTLFCIRENFQPVSK-K---E-------------ML---H-MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILT 243 (408)
T ss_pred HHHHHHHHhccCcccccc-h---h-------------hh---H-HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333 33332111100 0 0 00 0 122345667777654332 23333444556677889
Q ss_pred HHHHHHhCCCccc---ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQFRLPSHT---ANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~gls~~~---agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|++++.+..... .+++..... .+.+++.++.|++.||++++
T Consensus 244 ~~~~~~~~~~~~~~~~~g~~~~~~~-l~~~~~~~~~g~l~dr~g~~ 288 (408)
T PRK09874 244 LYVRELAGNVSNIAFISGMIASVPG-VAALLSAPRLGKLGDRIGPE 288 (408)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccccc
Confidence 9988765533221 222222221 23456677789999999865
No 75
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.01 E-value=1.9e-09 Score=104.43 Aligned_cols=49 Identities=10% Similarity=0.052 Sum_probs=43.3
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.+..++...+++.|++|+++|+++++++.....+|..+||.+++++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 170 (496)
T PRK03893 122 MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV 170 (496)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3456677788999999999999999999999999999999999988764
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.01 E-value=2.3e-09 Score=101.97 Aligned_cols=154 Identities=11% Similarity=0.061 Sum_probs=94.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy11785 20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTK 99 (308)
Q Consensus 20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~ 99 (308)
++++++.+|.......+|.++||.++|++.+. .|+..|++.+++.++..+.++..+++.++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK09528 136 SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-------------------NPQINFWLGSGSALILLVLLFFAKPDAPS 196 (420)
T ss_pred HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-------------------CchHhHHHHHHHHHHHHHHHhcccccccc
Confidence 34567788888889999999999999988642 15556776666555544444443333222
Q ss_pred CCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh---CCCccc
Q psy11785 100 ASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQF---RLPSHT 176 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~---gls~~~ 176 (308)
+.+.+ +++ + ++. .+...+..++++|||.++...+...........+..++|.|+++.+ +.+..+
T Consensus 197 ~~~~~-~~~--------~-~~~---~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
T PRK09528 197 TAKVA-NAL--------G-ANA---SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV 263 (420)
T ss_pred hhhhc-cch--------h-ccc---ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence 11100 000 0 000 0112344667889998776666555555555556667888887765 455555
Q ss_pred ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 177 ANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 177 agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|.+.+...+ ..+++.+++|++.||+++|
T Consensus 264 ~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~ 292 (420)
T PRK09528 264 FGYLNSFQVF-LEALIMFFAPFIINRIGAK 292 (420)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHhCcc
Confidence 6665554433 3467889999999999876
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.00 E-value=4.7e-09 Score=98.93 Aligned_cols=166 Identities=11% Similarity=0.066 Sum_probs=99.7
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML 85 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll 85 (308)
..+...++++|.. +++++.+|.......+|.++||.++|.+.++ .|+..|.+.+++.++
T Consensus 116 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-------------------~~~~~f~~~~~~~~~ 174 (396)
T TIGR00882 116 GAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI-------------------DPQIVFWLGSGFALI 174 (396)
T ss_pred chhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-------------------CchHHHHHHHHHHHH
Confidence 3444455555532 3345677888888899999999999987542 266677777766666
Q ss_pred HHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785 86 AAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY 165 (308)
Q Consensus 86 ~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y 165 (308)
..+..+...++.|++++.+ + + .+.++. +.-.+..++++|||.++...+...........+..++|.|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y 241 (396)
T TIGR00882 175 LMLLLMFAKPKAPSSATVA-N-A-------LGANAS----AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANF 241 (396)
T ss_pred HHHHHHHhCCCCchhhhhh-c-c-------cccccC----CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444333322211100 0 0 000000 1112456889999998777666665555666677788999
Q ss_pred HHHHh---CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 166 FETQF---RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 166 l~~~~---gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+++.+ +.+....|++.....+ ...++.+..|++.||+++|
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~i-~~~~~~~~~g~l~~r~g~~ 284 (396)
T TIGR00882 242 FTSFFATPQQGTRVFGYVTTMGEL-LNALIMFCAPLIINRIGAK 284 (396)
T ss_pred HHHhccccccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccc
Confidence 98876 4444555655443322 3355678889999999866
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.99 E-value=3.2e-09 Score=101.02 Aligned_cols=174 Identities=16% Similarity=0.162 Sum_probs=109.7
Q ss_pred hhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785 11 IPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA 89 (308)
Q Consensus 11 ~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~ 89 (308)
.++..|.. ++++|++..++......+|..++.++++.+.....+ .+..+ +|+..|++.+++.++..+.
T Consensus 121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~---------~~~~~--g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG---------GDDKF--GWFMFALVLALIGVVSLII 189 (437)
T ss_pred hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Ccccc--cHHHHHHHHHHHHHHHHHH
Confidence 45666766 478999999998888889888888887776653211 01111 4777788877776666554
Q ss_pred HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785 90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ 169 (308)
Q Consensus 90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~ 169 (308)
.+.+-++.+++.+. +++ .+ .++.+.++++++||.++...+..++.....+.+..+.+.|++..
T Consensus 190 ~~~~~~e~~~~~~~-------------~~~-~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (437)
T TIGR00792 190 CFFGTKERYSEIPK-------------NIE-KK---LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYV 252 (437)
T ss_pred HHcCCEecCCCCCc-------------ccc-cC---CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeee
Confidence 43332221111000 000 00 12445678899999998888887777777777777778777766
Q ss_pred hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785 170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI 216 (308)
Q Consensus 170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~ 216 (308)
++ ++.+.+.+.... ..+.+++.++.+++.||++.| +...++.+
T Consensus 253 ~~-~~~~~~~~~~~~-~i~~ii~~~~~~~l~~r~g~~--~~~~~~~~ 295 (437)
T TIGR00792 253 LG-DPELFSYMGSIA-IVAGLIGVLLFPRLVKKFGRK--ILFAGGIL 295 (437)
T ss_pred cC-ChHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcH--HHHHHHHH
Confidence 66 444555444333 345678888999999999854 44444333
No 79
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.97 E-value=1.8e-09 Score=109.31 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=63.1
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..+|+..+++.|++|+++|+++++++.+...+|.++++.++.+++..+ +|....... . ...+||..|++.++
T Consensus 268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~-G~~~~~g~~---~-~~~gWR~l~~i~~l 342 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY-GWSFQMGSA---Y-QFHSWRVFVIVCAF 342 (742)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhccccc---c-ccccHHHHHHHHHH
Confidence 445667899999999999999999999999999999999999998876543 111100000 0 01247777777766
Q ss_pred HHHHHHHHHHhccCC
Q psy11785 82 FLMLAAVAMFMFPKT 96 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~ 96 (308)
..++..+.++++||+
T Consensus 343 p~ll~ll~~~~lPES 357 (742)
T TIGR01299 343 PCVFAIGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHcCCC
Confidence 665555555666765
No 80
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.95 E-value=2.4e-08 Score=92.64 Aligned_cols=187 Identities=17% Similarity=0.184 Sum_probs=131.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCC-CCCch----hHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITP-SDPRW----IGAWWLGL 76 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~-~~~~W----~gaWw~~f 76 (308)
|-+.+.+.+.+|+.+.-++++.++.+.+.+....+|.++||++|+.++.. ++- ....+ ....| ...|+..|
T Consensus 117 Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils--~~~--~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 117 GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS--GVA--LTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh--hhh--hccCHHHHHHHHHHHHHhhhhHH
Confidence 44567788899999999999999999999999999999999999988642 000 00000 00012 23477888
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHH
Q psy11785 77 VLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIA 156 (308)
Q Consensus 77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 156 (308)
++.+...+++++.... .++|+.++...+ ..+ .++. ...+++|||.+...+++.++...+=.
T Consensus 193 l~~~~~lvll~v~~~~--~k~p~~~~~~~~--------------~~~-~~~~--~~~~l~~~~~~~~gvl~~FlYVG~Ev 253 (422)
T COG0738 193 LILAGLLVLLAVLILL--SKLPDLQVAAPS--------------LGA-SGSA--GLSSLFQNKHLRLGVLAIFLYVGAEV 253 (422)
T ss_pred HHHHHHHHHHHHHHHh--ccCCcCCccccc--------------ccc-cccc--hHHHHHhChHHHHHHHHHHHHHhHHH
Confidence 8887776666554433 222332211000 000 0111 35789999999999999999999999
Q ss_pred HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHH
Q psy11785 157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWI 214 (308)
Q Consensus 157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~ 214 (308)
....|++.|+++..|++..+++.+.... ..+.++|-++|.++++|++.+ +.+.+.
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~-~~~~~vGRFig~~lm~~~~~~--k~Laf~ 308 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFF-WVGFMVGRFIGSALMSRIKPE--KYLAFY 308 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCHH--HHHHHH
Confidence 9999999999998899988888776543 557789999999999988754 554443
No 81
>PRK10054 putative transporter; Provisional
Probab=98.95 E-value=2.4e-09 Score=101.21 Aligned_cols=160 Identities=14% Similarity=0.137 Sum_probs=101.2
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
...+...+++.|.+|+++|++++|+.+....+|.++||.+++++.+. .|+..|.+.++..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-------------------g~~~~f~~~~~~~~ 172 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-------------------SINLPFWLAAICSA 172 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------ccCcHHHHHHHHHH
Confidence 34566778889999999999999999999999999999999988642 25566776665555
Q ss_pred HHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 85 LAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 85 l~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
+..+.. +..||+.|+++++ + + +. ...++++|||.++...+..++.......+..+.+
T Consensus 173 i~~i~~~~~~~~~~~~~~~~----~----------~-------~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 230 (395)
T PRK10054 173 FPLVFIQIWVQRSEKAIATE----T----------G-------SV-WSPSVLLQDKALLWFTCSGFLASFVSGAFASCIS 230 (395)
T ss_pred HHHHHHHHHHhccccccccc----h----------h-------hh-hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHH
Confidence 443333 3345543221100 0 0 00 1136778999988777777777766666777888
Q ss_pred HHHHHHh--CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 164 KYFETQF--RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 164 ~yl~~~~--gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.|+.... +.+....+.+.....+ .........|++.||+++|
T Consensus 231 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~g~~~~~~~~~ 274 (395)
T PRK10054 231 QYVMVVADSDFAEKVVAVVLPVNAA-MVVSLQYSVGRRLNAANIR 274 (395)
T ss_pred HHHHHhcccchHHHHHHHHHHhhhh-heeeehhHHHHHHccCCch
Confidence 8886543 3444444544332221 1222334556777777654
No 82
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.93 E-value=1.8e-08 Score=94.89 Aligned_cols=155 Identities=14% Similarity=0.095 Sum_probs=91.0
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+...+...+++.|++|+++|++++++...+..+|.++|+.+++++.+.+ +|+..|++.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------g~~~~~~~~~~ 186 (399)
T PRK05122 125 GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG------------------GLAGLGLLIML 186 (399)
T ss_pred hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc------------------cHHHHHHHHHH
Confidence 456667777888899999999999999999999999999999999987643 25555555444
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF 161 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~ 161 (308)
..++.. ++..+ .|+.++.+ + .+ ++..+..++..++ .+...+.........++
T Consensus 187 ~~~~~~---~~~~~-~~~~~~~~---~------------~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 238 (399)
T PRK05122 187 LALLGL---LLARP-RPAVPPVK---G------------ER---LPFRRVLGRVWPY------GMGLALASIGFGTIATF 238 (399)
T ss_pred HHHHHH---HHHhc-CCCCCCCC---c------------cc---hhHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 332221 11111 12211100 0 00 0111112222111 11222333445566788
Q ss_pred HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+|.|+++ .++ +++++...... .+.+++.++.|++.||++++
T Consensus 239 ~~~~~~~-~~~--~~~~~~~~~~~-~~~~~~~~~~g~l~~r~~~~ 279 (399)
T PRK05122 239 ITLYYAA-RGW--DGAALALTLFG-VAFVGARLLFGNLINRLGGL 279 (399)
T ss_pred HHHHHHH-ccc--ccchHHHHHHH-HHHHHHHHHHHHHHHHhccH
Confidence 8988875 455 33444433332 34567888999999998754
No 83
>TIGR00898 2A0119 cation transport protein.
Probab=98.92 E-value=4.6e-09 Score=102.12 Aligned_cols=178 Identities=13% Similarity=0.091 Sum_probs=100.1
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|.+..++...+++.|++|+++|+++.++...+..+|.++++++++++.+ |+..|++.+
T Consensus 192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------------wr~~~~~~~ 250 (505)
T TIGR00898 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---------------------WRWLQLAVS 250 (505)
T ss_pred hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---------------------HHHHHHHHH
Confidence 35677788999999999999999999999999999999999998865421 666677777
Q ss_pred HHHHHHHHHHHhccCCCCCC--CCccCCc-c-c--------ccCCCc----cccccCCCCCCcchHHHHHhhcChHHHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKA--SPVNGTT-T-V--------ATLPTK----KESNQKNPSLKDFPKAVKRLLKNDILMYR 144 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~--~~~~~~~-~-~--------~~~~~~----~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~ 144 (308)
+..++..+..+++||+.+.. +.+.++. + . ...... ..+++.+. .+ .....++++++|.+...
T Consensus 251 i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~ 328 (505)
T TIGR00898 251 LPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSS-SK-KQYSFLDLFRTPNLRKT 328 (505)
T ss_pred HHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhh-cc-CCCcHHHHhCChHHHHH
Confidence 66666555556666642210 0000000 0 0 000000 00000000 00 01246788999987666
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 145 TASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+...+..+........++.++ ..++.+.....++.+ ...+.+.+++++++||+++|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~i~~~~~~~~l~dr~grr 385 (505)
T TIGR00898 329 TLCLMMLWFTTAFSYYGLVLDL-GNLGGNIYLDLFISG----LVELPAKLITLLLIDRLGRR 385 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cccCCChHHHHHHHH----HHHHHHHHHHHHHHHHhCCH
Confidence 5554433332222112222222 234444333333322 23356778889999999865
No 84
>PRK12382 putative transporter; Provisional
Probab=98.89 E-value=2.3e-08 Score=93.92 Aligned_cols=50 Identities=14% Similarity=0.017 Sum_probs=42.9
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
|.+...+...+++.|++|+|+|++++|+...+..+|.++||.+++++.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 125 GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455666778889999999999999999999999999999999988653
No 85
>cd00104 KAZAL_FS Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor.
Probab=98.89 E-value=7.6e-10 Score=70.01 Aligned_cols=28 Identities=43% Similarity=1.238 Sum_probs=24.3
Q ss_pred CCCCCcceeeCCCCceecCcccccccccc
Q psy11785 262 CDHSKFNPICGGDGRTYFSACHAGCQNIS 290 (308)
Q Consensus 262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~~ 290 (308)
|+. .|+||||+||+||.||||++|....
T Consensus 1 C~~-~~~pVCgsdg~tY~n~C~~~~~~c~ 28 (41)
T cd00104 1 CPK-EYDPVCGSDGKTYSNECHLGCAACR 28 (41)
T ss_pred CCC-CCCccCCCCCCEECCHhhhhHHhhc
Confidence 654 4799999999999999999998655
No 86
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.87 E-value=1.4e-08 Score=99.48 Aligned_cols=167 Identities=12% Similarity=0.134 Sum_probs=109.2
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+...|.-.+++.|.+|+++.+.+.++..+...+.-++||.+||.++..+ |.- ..|++.++.
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-----------------G~~-~~f~inals 178 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF-----------------GAA-AAFLINALS 178 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-----------------HHH-HHHHHHHHH
Confidence 44556777899999999999999999999999999999999999998753 222 236655554
Q ss_pred HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785 83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL 162 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~ 162 (308)
.++..+.+...+++.++. +.. .+...+++...++.+.++|......+..++......++...+
T Consensus 179 fl~~i~~l~~~~~~~~~~---~~~--------------~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLl 241 (524)
T PF05977_consen 179 FLISILALLRWKPPPPPS---SLP--------------RERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALL 241 (524)
T ss_pred HHHHHHHHHHcccccccc---ccc--------------hhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence 444333333332221110 000 001123444556667777876555554444455555667789
Q ss_pred HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
|.+.++++|.++...|++.+...+ |+++|.++.+++.+|++.
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gv-Gai~Gal~~~~l~~~~~~ 283 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGV-GAILGALLLPRLRRRLSS 283 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHH-HHHHHHHHHHHhhcccCc
Confidence 999999999999999998776543 556666666666665543
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.78 E-value=1.2e-07 Score=86.87 Aligned_cols=171 Identities=15% Similarity=0.110 Sum_probs=114.2
Q ss_pred ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy11785 8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAA 87 (308)
Q Consensus 8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~ 87 (308)
.+-++.|.+.||+ +-+..+|++.+...+|.++|+.+.-.+.+.. ++|+....+-+.+.++..
T Consensus 118 VLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----------------~gW~~aL~~WAl~allAl 179 (395)
T COG2807 118 VLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----------------GGWRGALGFWALLALLAL 179 (395)
T ss_pred HhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----------------ccHHHHHHHHHHHHHHHH
Confidence 4557788888865 4588899999999999999988877776542 346666665555555543
Q ss_pred HHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy11785 88 VAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFE 167 (308)
Q Consensus 88 i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~ 167 (308)
+.+ +|....+... +.+ ++.. ....++|||.-|...+...+.+..+|..+.|+|+++.
T Consensus 180 ~~W--lPq~~r~~~~-~~~---------------~~~~-----~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili 236 (395)
T COG2807 180 LIW--LPQALREQAA-SIA---------------TKLV-----SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI 236 (395)
T ss_pred HHH--hhhccccccc-ccc---------------cccc-----cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333 3442111100 000 0000 0135789999999999999999999999999999998
Q ss_pred HHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHH
Q psy11785 168 TQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYA 222 (308)
Q Consensus 168 ~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~ 222 (308)
+ .|+|+.++|.+.+...+. .+...+++-.+.+|.+- .|........++.++.
T Consensus 237 ~-~G~sa~~aG~llsl~~l~-~~~~~ll~P~la~R~~n-~r~~~~~~~~~~l~G~ 288 (395)
T COG2807 237 D-RGLSAAEAGSLLSLMQLA-QLPTALLIPLLARRSKN-QRPLVVLALLLMLVGL 288 (395)
T ss_pred H-cCCCHHHhhhHHHHHHHH-HHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHH
Confidence 6 699999999988776654 45567788888888543 3333333333344443
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.76 E-value=1.3e-07 Score=92.18 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=59.7
Q ss_pred CccccccccchhhhcCccCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANR--ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL 78 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~--~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii 78 (308)
+|++...|...+++.|.+|++ +|.+++++++++..+|+++||.+++++.+.+ +||..|.+
T Consensus 117 ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~------------------gw~~~F~i 178 (489)
T PRK10207 117 VGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF------------------GYSVTYNL 178 (489)
T ss_pred hccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh------------------ChHHHHHH
Confidence 477888899999999999887 4577899999999999999999999997643 37888888
Q ss_pred HHHHHHHHHHHHHhccCC
Q psy11785 79 VAVFLMLAAVAMFMFPKT 96 (308)
Q Consensus 79 ~g~~~ll~~i~~~~~p~~ 96 (308)
.++..++..+.+...++.
T Consensus 179 ~~i~~~~~~~~~~~~~~~ 196 (489)
T PRK10207 179 CGAGLIIALLVYFACRGM 196 (489)
T ss_pred HHHHHHHHHHHHHHcchh
Confidence 765443333334444433
No 89
>KOG3764|consensus
Probab=98.71 E-value=1.2e-08 Score=94.33 Aligned_cols=163 Identities=15% Similarity=0.181 Sum_probs=118.9
Q ss_pred CccccccccchhhhcCccCCCC-chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRE-SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV 79 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~-~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~ 79 (308)
+|.|...+.|.++++|.+|+++ |++++|+.....++|-.+||.+||++.++. +-..+|+++
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~------------------Gk~aPFlVL 232 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA------------------GKSAPFLVL 232 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc------------------CCcCcHHHH
Confidence 4778888999999999999774 799999999999999999999999997642 356789999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
+++.++-+.+-++.-+....+++ + . .++ ..+++|++.|-.+....+.......+.-.-
T Consensus 233 ~~v~Lld~~L~l~vi~p~~~~~~-----~------------~---~~~--~~~~~Ll~dP~I~~~agai~~~n~~lafLe 290 (464)
T KOG3764|consen 233 AIVLLLDGALQLLVIEPTEMDPD-----S------------T---EQG--TPMWSLLMDPYILLIAGAITFSNSSLAFLE 290 (464)
T ss_pred HHHHHHHHHHHHheeCccccCcc-----c------------c---ccC--ccHHHHHhCchHhhhhcchhhccchHHHhC
Confidence 98887776654443221110000 0 0 001 135789999988777776666666666566
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
-.+|.+..+++..+.-+.|+.+-...+ .-.+|..+-|.+.||++
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~-~y~ig~~lfg~la~k~~ 334 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASL-SYAIGTNLFGKLADKYP 334 (464)
T ss_pred cccHHHHHHhccCCCcceeeeeccccc-chhccCchHHHHHHhcC
Confidence 677788888888555588887644443 34788889999999987
No 90
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.67 E-value=3.7e-07 Score=87.16 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=113.2
Q ss_pred hhhhcCccC-CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785 11 IPYIDDNVA-NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA 89 (308)
Q Consensus 11 ~a~i~d~~~-~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~ 89 (308)
.+++.|..+ +++|.+..+.-.....+|..+...+.+.+.+.+.+ ++.. .+|.....+.+++.++..+.
T Consensus 125 ~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~---------~~~~--~~~~~~~~v~~iv~~v~~~i 193 (428)
T PF13347_consen 125 NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG---------GDTS--NGYRWMALVLAIVGLVFFLI 193 (428)
T ss_pred hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---------Cccc--hHHHHHHHHHHHHHHHHhhh
Confidence 567778886 57899999988888888887777777777654321 1111 13555566666665555444
Q ss_pred HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785 90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ 169 (308)
Q Consensus 90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~ 169 (308)
.++..|+.+++.++ ++.+. ++.+.++.++|||.++...+..++.........++.+.|.+..
T Consensus 194 ~~~~~ke~~~~~~~---------------~~~~~---~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~v 255 (428)
T PF13347_consen 194 TFFFVKERSVEVTE---------------QEKKI---SLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYV 255 (428)
T ss_pred hhheeeeccccccc---------------ccccc---ccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 43333330000000 00111 2334568899999999888888888888888888999999999
Q ss_pred hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785 170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL 220 (308)
Q Consensus 170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~ 220 (308)
.|.+. ..+.+.... ....+++.++.+++.||++.+ +....+.+...+
T Consensus 256 l~~~~-~~~~~~~~~-~~~~~v~~~~~~~l~~r~gk~--~~~~~~~~~~~~ 302 (428)
T PF13347_consen 256 LGNEG-LISIFMLIF-FVASIVGSPLWGRLSKRFGKK--KVYIIGLLLAAL 302 (428)
T ss_pred hcCch-hhHHHHHHH-HHHHHHHHHHHHHHHHHccce--eehhhhHHHHHH
Confidence 88883 344443333 334577888999999999865 444444444333
No 91
>KOG2504|consensus
Probab=98.66 E-value=2.2e-07 Score=90.64 Aligned_cols=200 Identities=16% Similarity=0.137 Sum_probs=127.8
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|-+..+.-+..++..+| +|+|+++.|+..++..+|..+=|.+--++++.| +||..+++.+
T Consensus 147 ~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~------------------G~r~~~l~~~ 207 (509)
T KOG2504|consen 147 LGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY------------------GWRGALLIFG 207 (509)
T ss_pred ccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh------------------CcHHHHHHHH
Confidence 355666777777777555 678999999999999999998888888887755 3666666666
Q ss_pred HHHHHHHHHHHhccCCCCCC-CC------------c-------cC--CcccccCC----Cc--cccccCCCCCCcch---
Q psy11785 81 VFLMLAAVAMFMFPKTLTKA-SP------------V-------NG--TTTVATLP----TK--KESNQKNPSLKDFP--- 129 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~-~~------------~-------~~--~~~~~~~~----~~--~~~~~~~~~~~~~~--- 129 (308)
.+.+-..+.-+.+++..++. +. + +. .+...... .. .++.+.+.......
T Consensus 208 ~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (509)
T KOG2504|consen 208 GISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFL 287 (509)
T ss_pred HHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhh
Confidence 55444333322222211111 11 0 00 00000000 00 00000000000111
Q ss_pred -HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCcc
Q psy11785 130 -KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNAR 208 (308)
Q Consensus 130 -~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~ 208 (308)
...++++|+|.|+...++..+....++....++|.|.+ .++++..+++.+...+.+ .-++|.++.|++.||...+.+
T Consensus 288 ~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi-~~i~gRi~~G~laD~~~~~~~ 365 (509)
T KOG2504|consen 288 SMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGV-SDIIGRIILGLLADKPGIRAL 365 (509)
T ss_pred hhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHH-hhhhhhhhhhhhcCccccchH
Confidence 11368999999999999999999999999999999999 799999999988776654 457899999999999886655
Q ss_pred chhHHHHHHHHHH
Q psy11785 209 FVAAWIAITAVLY 221 (308)
Q Consensus 209 ~~~~~~~~~~~~~ 221 (308)
..-.++++...++
T Consensus 366 ~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 366 VLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHHHHHHH
Confidence 5545444444443
No 92
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.66 E-value=4.5e-07 Score=87.92 Aligned_cols=186 Identities=13% Similarity=0.159 Sum_probs=126.5
Q ss_pred hhhhcCccCCCCc--------------------------hhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCC
Q psy11785 11 IPYIDDNVANRES--------------------------PLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPS 64 (308)
Q Consensus 11 ~a~i~d~~~~~~~--------------------------~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~ 64 (308)
.+|+.|..+++++ ++..+.-.+...+|..+..++.-.+.....+ . .
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~-------~-~ 219 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGS-------T-A 219 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------c-c
Confidence 4677777777777 7887777777777777777766555432110 0 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHH
Q psy11785 65 DPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYR 144 (308)
Q Consensus 65 ~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~ 144 (308)
+..| +-+..+.+.|+--++.++|++++-++.|+.+..+... +..+...+++.+.+|++-|+|.....
T Consensus 220 ~~~~--~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~l~~t~k~~~~~~~~~~f 286 (477)
T PF11700_consen 220 SNTW--AIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-----------SYLRFGFKRLWRTFKEIRKLRQLFLF 286 (477)
T ss_pred ccch--hhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-----------hHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 1122 2367788888877778888766555544321111000 00011234566778888888988888
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785 145 TASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA 218 (308)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~ 218 (308)
.++.++..-++..+.++...|..+++|++..+...+.. +.-..+++|.++.|++.||+|.|.++++..+++..
T Consensus 287 Lia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l-~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 287 LIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGL-VVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999999655443 33445789999999999999998776665544443
No 93
>KOG2563|consensus
Probab=98.66 E-value=5.2e-07 Score=84.85 Aligned_cols=178 Identities=15% Similarity=0.159 Sum_probs=109.6
Q ss_pred cCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHH--HHHHHHHHHHHHHHHHh
Q psy11785 15 DDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLG--LVLVAVFLMLAAVAMFM 92 (308)
Q Consensus 15 ~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~--fii~g~~~ll~~i~~~~ 92 (308)
.-||+++||+.+..+-.++..+|.++|+++...+...- + +.++. .|-.. |+..+.+..+......+
T Consensus 166 ~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~------~--~~~~~----~~~~~~~f~~~~~l~~l~l~l~~~ 233 (480)
T KOG2563|consen 166 AVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS------K--DSEDN----SWLFFTLFLGVECLAALLLALVLF 233 (480)
T ss_pred HhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC------C--Ccchh----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34899999999999888888899999998888775421 0 11122 24332 44344433333222222
Q ss_pred ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Q psy11785 93 FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL 172 (308)
Q Consensus 93 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gl 172 (308)
..++.|+.+...... +.+ -.++++.++++++|+.|..+.+.......++++..+.+-.-+.-+ |.
T Consensus 234 ~~~~~P~tPps~s~~-----------~~~---~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-gY 298 (480)
T KOG2563|consen 234 VFTKKPPTPPSASQA-----------ALQ---DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPS-GY 298 (480)
T ss_pred hcCCCCCCCCchhHh-----------hhh---cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccc-cC
Confidence 333334333221110 001 125788999999999999998888888888888777665434322 34
Q ss_pred CcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 173 PSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 173 s~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
+...+|... ...+.+.++|+++.|.+.||.+ +-|...+......+++
T Consensus 299 ~~~~aG~ig-~l~iv~Gmlga~~~gii~Dktk-~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 299 EGVFAGYIG-ALMIVAGMLGALASGIIADKTK-KFKLTTLVLYLFALVG 345 (480)
T ss_pred CccccchhH-HHHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHHHHH
Confidence 445666654 4445677899999999999976 3455555544444444
No 94
>KOG2615|consensus
Probab=98.64 E-value=1.8e-07 Score=86.22 Aligned_cols=174 Identities=16% Similarity=0.152 Sum_probs=93.4
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHH---HHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGL---VLVAVFL 83 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~f---ii~g~~~ 83 (308)
..+..+++.|.+++|+|++.++.+..+..+|-++||++||++.++- +.. |-.|..+ +++....
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~-~~~-------------g~~p~alP~~~v~i~a~ 203 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS-SIS-------------GSYPFALPCLLVFILAA 203 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH-hhh-------------ccCchHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999998731 110 0011111 1111111
Q ss_pred HHHHHHHHhccCCCCCCCCccCCccc-ccCCCccccccCCCCCCcchHHHHHhhcChHHHH-------HHHHHHHHHHHH
Q psy11785 84 MLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMY-------RTASSVLHILPI 155 (308)
Q Consensus 84 ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~-------~~l~~~~~~~~~ 155 (308)
.-+.+..+++||++|.+++.++..+. +..+. +....+.+.. .--.++||+...- ..+-.+.....+
T Consensus 204 ~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~----~~~~~~~~~~--~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~ 277 (451)
T KOG2615|consen 204 GDVTFFPWFLPETLPLRKRNDEHSTLQEAADD----RLALLKFARI--FKVAALRNPPLLDFISVLRIFGLHYFLYLELF 277 (451)
T ss_pred HHHHHHHHhCCccccchhhcccccchhhhhhh----hhhhcchhhh--hhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 21223446789998765543111110 00000 0000011100 1123344443221 112222333334
Q ss_pred HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
-++..+.+++-+..||+++.+.|-++.... +.+.++.+.+.+|..
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tG----l~m~~~ql~~~~~l~ 322 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTG----LLMLVIQLALVPILP 322 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhh----HHHHHHHHhcccccc
Confidence 444555555557889999999987664332 344555566655554
No 95
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=1.2e-06 Score=81.96 Aligned_cols=187 Identities=16% Similarity=0.093 Sum_probs=111.7
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
...+...+++.|..++|+|++..++++.+..+|-+++-++.|.+++-|.. .| -++. +-..+++.+
T Consensus 105 ~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-----------~r---L~~v-~~~~a~i~~ 169 (403)
T PF03209_consen 105 ASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-----------ER---LIQV-IQGVALIAL 169 (403)
T ss_pred HhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-----------HH---HHHH-HHHHHHHHH
Confidence 34566788999999999999999999999999999999999988875421 11 1222 222222222
Q ss_pred HHHH-HHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785 85 LAAV-AMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP 163 (308)
Q Consensus 85 l~~i-~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P 163 (308)
++.+ .++... ++..+.... + + ++..++...++++..||.-....+..+.....++.=-..+-
T Consensus 170 ~l~~ia~wg~E---~r~~~~~~~----------~-~---~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLE 232 (403)
T PF03209_consen 170 LLNLIALWGQE---PRRSRRAAA----------A-E---RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILE 232 (403)
T ss_pred HHHHHHHHhcc---cCCcccccC----------C-C---CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcC
Confidence 2222 222211 111111100 0 0 00113556778888888654444433333333333333444
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHH
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGM 225 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
-|=-+.||+|.++..-+.+... .+..+|..+.|++..| +.+.++..++++...++++.+.
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~-~G~L~G~~~~g~~l~~-~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWG-GGTLLGMLLAGFLLSR-RLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHHHHHHH
Confidence 4556799999999887766543 4668888888887775 3345567777777776665543
No 96
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.50 E-value=1e-06 Score=84.10 Aligned_cols=83 Identities=16% Similarity=0.064 Sum_probs=55.3
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc--------ccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785 132 VKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS--------HTANMVSGVGGILVMGIGIILSGVFILKF 203 (308)
Q Consensus 132 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~--------~~agl~~g~~~i~~~~iG~~lgG~l~~r~ 203 (308)
.++++|||.++...+..++..........++|.|+++ .|.++ +..+++.+...+ +.+++.++.|++.||+
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i-~~i~~~~~~g~l~dr~ 278 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQF-SEIFFILTIPFFLKRF 278 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 4578899998877777777666666677888999875 45444 444655544333 3466778899999999
Q ss_pred cCCccchhHHHHHHH
Q psy11785 204 KPNARFVAAWIAITA 218 (308)
Q Consensus 204 ~~~~~~~~~~~~~~~ 218 (308)
+.| +.+..+.+..
T Consensus 279 g~r--~~l~~~~~~~ 291 (418)
T TIGR00889 279 GIK--KVMLLSLVAW 291 (418)
T ss_pred CcH--HHHHHHHHHH
Confidence 754 4444444333
No 97
>PRK09848 glucuronide transporter; Provisional
Probab=98.43 E-value=1.1e-06 Score=84.38 Aligned_cols=86 Identities=8% Similarity=-0.025 Sum_probs=63.9
Q ss_pred chHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 128 FPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 128 ~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+...++.++|||.++...+..++.......+.+..|.|+++.+|.++...++... ....+.+++.++.+++.||++.+
T Consensus 217 ~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~r~g~~- 294 (448)
T PRK09848 217 LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLV-QNLVGTVASAPLVPGMVARIGKK- 294 (448)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCcH-
Confidence 4456788999999999888888888888888888999999999987766554332 22234567788899999998754
Q ss_pred cchhHHHHH
Q psy11785 208 RFVAAWIAI 216 (308)
Q Consensus 208 ~~~~~~~~~ 216 (308)
+...++.+
T Consensus 295 -~~~~~g~~ 302 (448)
T PRK09848 295 -NTFLIGAL 302 (448)
T ss_pred -HHHHHHHH
Confidence 44444433
No 98
>cd01327 KAZAL_PSTI Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins.
Probab=98.42 E-value=1.4e-07 Score=60.64 Aligned_cols=28 Identities=36% Similarity=0.955 Sum_probs=24.1
Q ss_pred ccCCCCCcceeeCCCCceecCccccccccc
Q psy11785 260 CECDHSKFNPICGGDGRTYFSACHAGCQNI 289 (308)
Q Consensus 260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~ 289 (308)
..|+ ..|+||||+||+||.|+|+. |.+.
T Consensus 3 ~~Cp-~~~~PVCGsDg~TY~N~C~l-~~~~ 30 (45)
T cd01327 3 FGCP-KDYDPVCGTDGVTYSNECLL-CAEN 30 (45)
T ss_pred CCCC-CCCCceeCCCCCEeCCHhHH-HHHH
Confidence 5686 56999999999999999999 7654
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=98.38 E-value=3.5e-06 Score=80.80 Aligned_cols=162 Identities=12% Similarity=0.105 Sum_probs=91.9
Q ss_pred hhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785 12 PYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAM 90 (308)
Q Consensus 12 a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~ 90 (308)
++..|+. +++||.+..++-.....+|..+++.++..+...+.+ .+.+ .+|+..+.+.+++.++..+..
T Consensus 132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~---------~~~~--~g~~~~~~i~~ii~~v~~~~~ 200 (444)
T PRK09669 132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK---------GDEQ--KGYFYAMMVMGLLGVVLFFCC 200 (444)
T ss_pred HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cchh--hhHHHHHHHHHHHHHHHHHHH
Confidence 4566666 457899888888878888888877766655543211 1111 247777777776655544333
Q ss_pred HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy11785 91 FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQF 170 (308)
Q Consensus 91 ~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~ 170 (308)
++..|+.++.+ + + . .++..+.++.++|||.++...+..++............+.|.+...
T Consensus 201 ~~~~~e~~~~~--~------------~---~---~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~ 260 (444)
T PRK09669 201 FFMTKERYTPE--V------------D---N---SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL 260 (444)
T ss_pred hCCeEEecCCC--C------------c---C---CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeec
Confidence 32222211000 0 0 0 0134566788999999988777666555555444454554444333
Q ss_pred CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 171 RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 171 gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+. +...+.+.. ......+++.++.+++.||++.+
T Consensus 261 ~~-~~~~~~~~~-~~~i~~ii~~~~~~~l~~r~gk~ 294 (444)
T PRK09669 261 LR-PDLATLFLV-TGMIAGLFGALLSERLLGKFDRV 294 (444)
T ss_pred CC-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhChH
Confidence 32 222222222 22334567888899999999754
No 100
>PRK11462 putative transporter; Provisional
Probab=98.37 E-value=9e-06 Score=78.62 Aligned_cols=153 Identities=12% Similarity=0.014 Sum_probs=86.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy11785 20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTK 99 (308)
Q Consensus 20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~ 99 (308)
++||++..++-.....+|..+++++...+.+.+.+ ++ ...+|.....+.+++.++..+..+...|+.++
T Consensus 141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~---------~~--~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~ 209 (460)
T PRK11462 141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG---------DN--KPLGFQGGIAVLSVVAFMMLAFCFFTTKERVE 209 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cc--hhhhHHHHHHHHHHHHHHHHHHHHhcceeccC
Confidence 78999999999988888888888887666553311 11 11246666666666555444333332222111
Q ss_pred CCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccc
Q psy11785 100 ASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM 179 (308)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl 179 (308)
.+ . .+. ++.+.++.+++||.++......++.........+....|.+-.++... ..+.
T Consensus 210 ~~-----~-------------~~~---~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~ 267 (460)
T PRK11462 210 AP-----P-------------TTT---SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVA 267 (460)
T ss_pred CC-----c-------------cCC---CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHH
Confidence 00 0 001 245567889999998766655554444433333333333333344432 2233
Q ss_pred cchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 180 VSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 180 ~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.... ..+.++|.++++++.||++.|
T Consensus 268 ~l~~~-~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 268 FLTTY-CVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhChH
Confidence 32222 234577888999999998754
No 101
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.37 E-value=1.1e-05 Score=78.40 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=60.1
Q ss_pred CccccccccchhhhcCccCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRE---SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV 77 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~---~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi 77 (308)
+|.+...|...+++.|++|+++ |+.+.++++.+..+|.++||++++++.+.+ +|+..|.
T Consensus 114 ~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~------------------g~~~~f~ 175 (475)
T TIGR00924 114 VGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY------------------GYHVGFN 175 (475)
T ss_pred hccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc------------------ChHHHHH
Confidence 3567778888999999998765 888999999999999999999999987643 3778888
Q ss_pred HHHHHHHHHHHHHHhccCCC
Q psy11785 78 LVAVFLMLAAVAMFMFPKTL 97 (308)
Q Consensus 78 i~g~~~ll~~i~~~~~p~~~ 97 (308)
+.++..++..+.++..++..
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~ 195 (475)
T TIGR00924 176 LAAVGMVIGLLTFFAGRHML 195 (475)
T ss_pred HHHHHHHHHHHHHHHccccc
Confidence 87755544444444444443
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.28 E-value=9e-06 Score=78.79 Aligned_cols=168 Identities=10% Similarity=0.037 Sum_probs=92.4
Q ss_pred hhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785 11 IPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA 89 (308)
Q Consensus 11 ~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~ 89 (308)
.++++|.. .++||.+..++-.....+|..+++.++..+++.+.+ .+ +.. +|.....+.+++.++..+.
T Consensus 128 ~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~---------~~-~~~-g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 128 WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG---------GD-RGF-GFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cc-hhh-hHHHHHHHHHHHHHHHHHH
Confidence 35667877 588999988875555566655555444433332210 01 111 3555555555554443333
Q ss_pred HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785 90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ 169 (308)
Q Consensus 90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~ 169 (308)
.+..-|+.+..+..+. . ++.+ .++.+.++.+++||.++...+..++.........++.+.|++..
T Consensus 197 ~~~~~~e~~~~~~~~~----------~--~~~~---~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~ 261 (473)
T PRK10429 197 TLRNVHEVYSSDNQVS----------A--EGSH---LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV 261 (473)
T ss_pred HHcCceecCCcccccc----------c--cccC---CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE
Confidence 2222222111100000 0 0001 13445567788999998888877777777777777777666654
Q ss_pred hCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+ +....+++..... ...+++.++.+++.||++.|
T Consensus 262 ~~-~~~~~~~~~~~~~-i~~ii~~~~~~~l~~r~gkk 296 (473)
T PRK10429 262 IG-DADLFPYYLSYAG-AANLVTLILFPRLVKSLSRR 296 (473)
T ss_pred CC-CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCcH
Confidence 44 4444444443322 34567788889999999865
No 103
>KOG0569|consensus
Probab=98.26 E-value=3.7e-06 Score=81.03 Aligned_cols=185 Identities=15% Similarity=0.111 Sum_probs=102.1
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
..+..-|+.|..|++.||..-.....+..+|-.+|..+|.--+ .. . +. .|+..+.+..+.+++.
T Consensus 134 ~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i--lG---------t-~~----~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 134 TGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL--LG---------T-ED----LWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh--cC---------C-Cc----chHHHHHHHHHHHHHH
Confidence 3455678999999999999877778888888888776664321 11 1 11 2666676666666666
Q ss_pred HHHHHhccCCCCC---CCCccC--Cccccc----C--CCccc----cccCCCCCCcchHHHHHhhcChHH-----HHHHH
Q psy11785 87 AVAMFMFPKTLTK---ASPVNG--TTTVAT----L--PTKKE----SNQKNPSLKDFPKAVKRLLKNDIL-----MYRTA 146 (308)
Q Consensus 87 ~i~~~~~p~~~p~---~~~~~~--~~~~~~----~--~~~~~----~~~~~~~~~~~~~~~~~Ll~n~~f-----~~~~l 146 (308)
.+.+.++||+.+= .+.+++ +++.+. . ++..+ +.+.++..++....++++++||.. +..++
T Consensus 198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v 277 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVV 277 (485)
T ss_pred HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHH
Confidence 6667778876331 011111 000000 0 00000 000000011112235677777543 33333
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccc
Q psy11785 147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARF 209 (308)
Q Consensus 147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~ 209 (308)
...-...+.++...+.-.+++ .-|++..++-.....+.+ ...+.++++.+++||+|+|+.-
T Consensus 278 ~~~qq~sGi~ai~~Yst~i~~-~aG~~~~~a~~an~~~g~-v~~~~t~~~~~lid~~gRRpLl 338 (485)
T KOG0569|consen 278 SFAQQFSGINAIFFYSTSIFK-TAGFTPEEAQYANLGIGI-VNLLSTLVSPFLIDRLGRRPLL 338 (485)
T ss_pred HHHHHhcCcceeHHHHHHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCcHHH
Confidence 334444455555555555555 568888876654433322 2356788999999999987544
No 104
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.23 E-value=1.7e-05 Score=76.19 Aligned_cols=48 Identities=21% Similarity=0.116 Sum_probs=43.9
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT 49 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll 49 (308)
+++|+.+ ...++|..++|+++|+++.|++.++..+|.++|+++++++.
T Consensus 127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577787 88999999999999999999999999999999999999944
No 105
>KOG0254|consensus
Probab=98.18 E-value=4.3e-06 Score=81.91 Aligned_cols=198 Identities=13% Similarity=0.165 Sum_probs=111.6
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+....+...|++|..|++.|+...+.......+|..+|+++|...-+. + | .||..+.+..+
T Consensus 155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~--------------~-~--~Wr~~~~~~~i 217 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV--------------Y-A--GWRIPLGLALI 217 (513)
T ss_pred chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC--------------C-c--cHHHHHHHHHH
Confidence 55566677889999999999999999999999999999997777655321 1 1 47877777777
Q ss_pred HHHHHHHHHHhccCCCCCCCCccCCc-c----cccC-C--Cccccc-----------cCCCCCCcchHHHHHh----hcC
Q psy11785 82 FLMLAAVAMFMFPKTLTKASPVNGTT-T----VATL-P--TKKESN-----------QKNPSLKDFPKAVKRL----LKN 138 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~~p~~~~~~~~~-~----~~~~-~--~~~~~~-----------~~~~~~~~~~~~~~~L----l~n 138 (308)
..++..+.+++.||+ |+...++.+. + ...+ . +.+.+. +.....++. ..+.+ .++
T Consensus 218 ~~~~~~~~~~~~pes-p~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~ 294 (513)
T KOG0254|consen 218 PAVILALGMLFLPES-PRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKA--SWGELFSPKVRK 294 (513)
T ss_pred HHHHHHHHHHhCCCC-hHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccc--cHHHhcCcchHH
Confidence 777777666666654 3211111000 0 0000 0 000000 000000000 11222 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc-ccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785 139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS-HTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217 (308)
Q Consensus 139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~-~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~ 217 (308)
+.++...+..+-...+......+.+.++++.-.-+. ....++.+. ..+++.+++.+++||+|+| ..+.++.+.
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~----v~~~~t~~~~~lvd~~gRr--~lll~s~~~ 368 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGV----VNFLGTLVATYLVDRFGRR--KLLLFGAAG 368 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHH----HHHHHHHHHHHHHHHhccH--HHHHHhHHH
Confidence 344445555555555666677778888776433323 223333332 2356677779999999765 555555555
Q ss_pred HHHHHHHH
Q psy11785 218 AVLYALGM 225 (308)
Q Consensus 218 ~~~~~~~~ 225 (308)
..++.+..
T Consensus 369 m~~~~~~~ 376 (513)
T KOG0254|consen 369 MSICLVIL 376 (513)
T ss_pred HHHHHHHH
Confidence 55555433
No 106
>PF07648 Kazal_2: Kazal-type serine protease inhibitor domain; InterPro: IPR011497 This domain is usually indicative of serine protease inhibitors that belong to Merops inhibitor families: I1, I2, I17 and I31. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays and have a central alpha-helix, a short two-stranded antiparallel beta-sheet and several disulphide bonds [, , ]. The amino terminal segment of this domain binds to the active site of its target proteases, thus inhibiting their function.; PDB: 2KMP_A 1LDT_L 2KMR_A 2KMO_A 2KMQ_A 1AN1_I 4E0S_B 3T5O_A 4A5W_B 1LR7_A ....
Probab=98.18 E-value=4.3e-07 Score=57.45 Aligned_cols=30 Identities=37% Similarity=0.935 Sum_probs=24.0
Q ss_pred CCCCCcceeeCCCCceecCccccccccccc
Q psy11785 262 CDHSKFNPICGGDGRTYFSACHAGCQNISS 291 (308)
Q Consensus 262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~ 291 (308)
|+...++||||+||+||.|+|++.+..-..
T Consensus 1 C~~~~~~PVCg~dg~ty~n~C~l~~~~c~~ 30 (42)
T PF07648_consen 1 CPREYSSPVCGSDGKTYSNECELRCANCRT 30 (42)
T ss_dssp EESSSSSTEEETTSEEESSHHHHHHHHHHH
T ss_pred CcCCCCCCEEcCCCCEEhhHHHHHHHHHhc
Confidence 554445599999999999999999975544
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.09 E-value=9.4e-05 Score=71.71 Aligned_cols=156 Identities=8% Similarity=0.044 Sum_probs=88.3
Q ss_pred cccchhhhcCccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhhcc-cccCCCC--CCCCCCCCchhHHHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRES--PLYFAITIGVRILGPSLGFILGSFCTRL-YVDLSIP--SDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~--~~~~gi~~~~~~~Gp~lG~~lGg~ll~~-~v~~~~~--~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
++...+++.|.+|+++| +++.++...+..+|.++|+.+|++.... +..+... ....+. .-+..|++.++
T Consensus 132 ~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~F~i~a~ 205 (477)
T TIGR01301 132 QGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCA------NLKSCFLIDII 205 (477)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccc------hHHHHHHHHHH
Confidence 34457899999998865 6899999999999999999999975211 1010000 001111 13566887777
Q ss_pred HHHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785 82 FLMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT 160 (308)
Q Consensus 82 ~~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 160 (308)
..++..+... ..+|+.+..+++..+++ .++ .++.+.+...+++.+.++++ -|.++..++.+++..++++.+..
T Consensus 206 ~l~i~~l~t~~~v~E~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~ 279 (477)
T TIGR01301 206 LLAILTYIALSAVKENPLIGSDDFINSE---AAP-PSKHGEEAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFIL 279 (477)
T ss_pred HHHHHHHHHeeeeeccCCCccccchhhh---ccc-ccccchhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666555443 34443322211110000 000 00000111122222223222 34667788889999999999999
Q ss_pred HHHHHHH-HHhCCCc
Q psy11785 161 FLPKYFE-TQFRLPS 174 (308)
Q Consensus 161 ~~P~yl~-~~~gls~ 174 (308)
+...|+- +.|+-++
T Consensus 280 y~T~~vg~~v~~~~~ 294 (477)
T TIGR01301 280 FDTDWMGREVYGGSV 294 (477)
T ss_pred hccHHHHHHHcCCCC
Confidence 9999886 5777554
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.05 E-value=6e-05 Score=72.28 Aligned_cols=179 Identities=14% Similarity=0.078 Sum_probs=111.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH-hccCCCC
Q psy11785 20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF-MFPKTLT 98 (308)
Q Consensus 20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~-~~p~~~p 98 (308)
++||.+..+.-.....+|..+-.++-..+.+.+. ++|..+ +|+..-.+.++++++..+.-+ -.+|+..
T Consensus 144 ~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g---------~~~~~~--g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 144 PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG---------GGDKAL--GYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCcchh--hHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 6889998888888888886666666666666542 222222 467666666665544433222 2222211
Q ss_pred CCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccccc
Q psy11785 99 KASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTAN 178 (308)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~ag 178 (308)
+..+. + +.. .+++...+..+++|+.+....+...+...+..-..+.+..|.+-..|.+...+.
T Consensus 213 ~~~~~-------------~-~~~---~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~ 275 (467)
T COG2211 213 ETQPT-------------K-TGV---KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAY 275 (467)
T ss_pred ccccC-------------c-ccc---cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHH
Confidence 11000 0 001 113334556789999999999988888888888889999999888888877776
Q ss_pred ccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcC
Q psy11785 179 MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIG 232 (308)
Q Consensus 179 l~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (308)
+.+.. ..++.+++.++..++.+|+|.+ +...++.+..+++. +.+++.+
T Consensus 276 ~~~~~-~~~~~l~~~~~~p~L~~~~gkk--~~~~~~~~~~~i~~---~~~~f~~ 323 (467)
T COG2211 276 LLLLA-SGAGLLIGLILWPRLVKKFGKK--KLFLIGLLLLAVGY---LLLYFTP 323 (467)
T ss_pred HHHHH-HHHHHHHHHHhHHHHHHHhchH--HHHHHHHHHHHHHH---HHHHhhc
Confidence 55432 2345566788899999999854 55555544444433 3344455
No 109
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.04 E-value=4.2e-08 Score=93.90 Aligned_cols=80 Identities=21% Similarity=0.423 Sum_probs=57.5
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+..++....|+.|..|+++|++..++......+|..++.+++-.+.. +. + .| .||..+.+..+
T Consensus 115 ~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~-----------~-~~--~Wr~~~~~~~~ 179 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-YS-----------D-NW--GWRILLIFGAI 179 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-cc-----------c-cc--ccccccccccc
Confidence 5567788999999999999999999999999888888888877654422 11 0 11 36776666666
Q ss_pred HHHHHHHHHHhccCC
Q psy11785 82 FLMLAAVAMFMFPKT 96 (308)
Q Consensus 82 ~~ll~~i~~~~~p~~ 96 (308)
..++..+..+++||+
T Consensus 180 ~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 180 PSLLVLLLRFFLPES 194 (451)
T ss_pred ccccccccccccccc
Confidence 655554555566665
No 110
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.04 E-value=7.8e-05 Score=72.89 Aligned_cols=66 Identities=11% Similarity=0.178 Sum_probs=51.5
Q ss_pred ccccccccchhhhcCccCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRE--SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV 79 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~--~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~ 79 (308)
|.+...|...+++.|.+|+++ +..++++++++..+|.++||+++|++.+.+ +||..|.+.
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~------------------g~~~~F~i~ 186 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY------------------GWSVAFALS 186 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh------------------CHHHHHHHH
Confidence 556677888899999998654 456789999999999999999999987643 377888876
Q ss_pred HHHHHH
Q psy11785 80 AVFLML 85 (308)
Q Consensus 80 g~~~ll 85 (308)
++..++
T Consensus 187 ~i~~~i 192 (500)
T PRK09584 187 VVGMLI 192 (500)
T ss_pred HHHHHH
Confidence 654443
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.96 E-value=5.1e-05 Score=71.21 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=119.2
Q ss_pred chhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc--ccCCCC-CCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 10 GIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY--VDLSIP-SDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 10 g~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~--v~~~~~-~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
--+++.|..++++-++.-+.-.....+|..+-.++.-.....+ ..++.. -.++|+|..- =++.+.+.++--++.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~---~ri~~~l~A~W~li~ 212 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED---VRITGLLAALWWLLF 212 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc---chhHHHHHHHHHHHH
Confidence 3578888999988888877766677777666665542111111 000000 1123333321 256677777777777
Q ss_pred HHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy11785 87 AVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYF 166 (308)
Q Consensus 87 ~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl 166 (308)
++|++..-++.++..... .+......|++...++++.+++.++...++.++..=++.+..++.-.|-
T Consensus 213 ~iPm~~~v~~~~~~~~~~-------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg 279 (438)
T COG2270 213 ALPMILNVHDAEKISSPP-------------PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG 279 (438)
T ss_pred HhHHHhcccccccccccc-------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 888876655544321000 0001123456777888999999888888898888888999999999999
Q ss_pred HHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 167 ETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 167 ~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...+|++..+..++..... ..+++|.+++|++.+|++.|
T Consensus 280 ~~~~gls~~~lll~g~~~~-vvA~lg~ii~g~Ld~rfg~k 318 (438)
T COG2270 280 AADLGLSSTELLLIGIALS-VVAALGAIIAGFLDERFGSK 318 (438)
T ss_pred HHHcCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCc
Confidence 9999999999877654444 35688999999999999987
No 112
>KOG2816|consensus
Probab=97.93 E-value=2.1e-05 Score=75.89 Aligned_cols=193 Identities=16% Similarity=0.235 Sum_probs=112.4
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
+.++..+.+|++|..+.++|...+|++......+-++||.+|+.+.+.+. --..|.+..+..
T Consensus 127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~------------------~a~~f~ia~~~~ 188 (463)
T KOG2816|consen 127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG------------------IALVFLIAAASG 188 (463)
T ss_pred hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC------------------chHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999987642 123455555444
Q ss_pred HHHH-HHHHhccCCCCCCCCccC-CcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHH-HHHHh
Q psy11785 84 MLAA-VAMFMFPKTLTKASPVNG-TTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPI-AGLYT 160 (308)
Q Consensus 84 ll~~-i~~~~~p~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~-~~~~~ 160 (308)
++.. ..++++||++.++++... .++ .... .. ......+..+.....=..|..+...+...+....- .+..-
T Consensus 189 ~~~~~y~~~~l~Esl~~~~~~~~~~~~--~~~~-~~---~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~ 262 (463)
T KOG2816|consen 189 ILSLLYMLLFLPESLQEKERSDATLRE--LTPG-SL---DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASD 262 (463)
T ss_pred HHHHHHHhhccccccCccccccccccc--cCCC-cc---cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCcee
Confidence 4333 345667777665443210 000 0000 00 00011122222222222344444444333332222 22231
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhh-heehhhccCCccchhHHHHHHHHHHHH
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILS-GVFILKFKPNARFVAAWIAITAVLYAL 223 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lg-G~l~~r~~~~~~~~~~~~~~~~~~~~~ 223 (308)
.++.|+...|+++..+.+.+.+...+.. .+++++. ..+.++++.+. .+.+++....+...
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~-~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~ 323 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILG-IISQLLLLPLLSSILGEKR--LISLGLLSEFLQLL 323 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHH
Confidence 4477888899999999997776666654 4455554 47777777653 55555555544433
No 113
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.90 E-value=0.00011 Score=72.80 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=52.1
Q ss_pred HHHhhcC-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcc---cccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 132 VKRLLKN-DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSH---TANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 132 ~~~Ll~n-~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~---~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
..+|+|+ +.|....+..++..+.+++...+.|......|+-++. ..+++..... .+.++|.++.|.+++|++
T Consensus 302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~-fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVG-FGSCAGAVILGLLFSKIR 377 (599)
T ss_pred CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHH-HHHHHHHHHHHHHHHHcc
Confidence 4689998 5677766777778888899999999999999988764 4454433332 245667777788888775
No 114
>PF00050 Kazal_1: Kazal-type serine protease inhibitor domain; InterPro: IPR002350 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family of Kazal inhibitors, belongs to MEROPS inhibitor family I1, clan IA. They inhibit serine peptidases of the S1 family (IPR001254 from INTERPRO) []. The members are primarily metazoan, but includes exceptions in the alveolata (apicomplexa), stramenopiles, higher plants and bacteria. Kazal inhibitors, which inhibit a number of serine proteases (such as trypsin and elastase), belong to family of proteins that includes pancreatic secretory trypsin inhibitor; avian ovomucoid; acrosin inhibitor; and elastase inhibitor. These proteins contain between 1 and 7 Kazal-type inhibitor repeats [, ]. The structure of the Kazal repeat includes a large quantity of extended chain, 2 short alpha-helices and a 3-stranded anti-parallel beta sheet [].The inhibitor makes 11 contacts with its enzyme substrate: unusually, 8 of these important residues are hypervariable []. Altering the enzyme-contact residues, and especially that of the active site bond, affects the the strength of inhibition and specificity of the inhibitor for particular serine proteases [, ]. The presence of this Pfam domain is usually indicative of serine protease inhibitors, however, Kazal-like domains are also seen in the extracellular part of agrins which are not known to be proteinase inhibitors.; GO: 0005515 protein binding; PDB: 1HPT_A 1CGI_I 1CGJ_I 2P6A_D 3HH2_C 2B0U_D 2BUS_A 1BUS_A 1OVO_A 3OVO_A ....
Probab=97.89 E-value=2.7e-06 Score=55.52 Aligned_cols=26 Identities=38% Similarity=1.087 Sum_probs=21.5
Q ss_pred CCCCCcceeeCCCCceecCccccccccc
Q psy11785 262 CDHSKFNPICGGDGRTYFSACHAGCQNI 289 (308)
Q Consensus 262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~ 289 (308)
|+ ..|+||||+||+||-+.|+- |...
T Consensus 8 C~-~~~~PVCGsdg~TY~N~C~l-C~~~ 33 (48)
T PF00050_consen 8 CP-REYDPVCGSDGVTYSNECEL-CAAN 33 (48)
T ss_dssp EE-SSCS-EEETTSEEESSHHHH-HHHH
T ss_pred CC-CCCCceECCCCCCccccchh-hhhh
Confidence 65 67999999999999999999 9433
No 115
>smart00280 KAZAL Kazal type serine protease inhibitors. Kazal type serine protease inhibitors and follistatin-like domains.
Probab=97.87 E-value=6.2e-06 Score=53.29 Aligned_cols=25 Identities=40% Similarity=1.030 Sum_probs=21.2
Q ss_pred CCCCCcceeeCCCCceecCccccccc
Q psy11785 262 CDHSKFNPICGGDGRTYFSACHAGCQ 287 (308)
Q Consensus 262 C~~~~~~PvC~~~g~ty~SpC~AGC~ 287 (308)
|+ ..|+||||+||.||-|.|+--+.
T Consensus 6 C~-~~~~pVCgsdg~TY~N~C~l~~~ 30 (46)
T smart00280 6 CP-REYDPVCGSDGVTYSNECHLCKA 30 (46)
T ss_pred CC-CCCCccCCCCCCEeCCHhHHHHH
Confidence 65 46999999999999999997544
No 116
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.87 E-value=1.2e-05 Score=78.06 Aligned_cols=187 Identities=12% Similarity=-0.001 Sum_probs=95.2
Q ss_pred ccchhhhcCccCCCCchh---HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 8 TLGIPYIDDNVANRESPL---YFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 8 ~lg~a~i~d~~~~~~~~~---~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
+.+-+++.|..+ +++.. ..+..+....+|.++|+.++|++.+.+ .|+..|.+.+++.+
T Consensus 139 v~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~------------------~~~~~f~~~a~l~l 199 (468)
T TIGR00788 139 VLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT------------------LTRILFLITAALLL 199 (468)
T ss_pred HhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc------------------CcchHHHHHHHHHH
Confidence 345566777776 43333 444555666789999999999887643 27777888777766
Q ss_pred HHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy11785 85 LAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPK 164 (308)
Q Consensus 85 l~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~ 164 (308)
+..+..++++|+.+....+..+++. ..............++..+..++.+++|..+...+..++.+....+....+-.
T Consensus 200 l~~~~~~~~~E~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~ 277 (468)
T TIGR00788 200 LQLFVSNLSKERRAFVRPRIGTYLE--MNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC 277 (468)
T ss_pred HHHHHHHhcccccccccccccccch--hhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE
Confidence 6655556666642111100000000 00000000000001122334566788887765444333311111111111111
Q ss_pred HHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785 165 YFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA 218 (308)
Q Consensus 165 yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~ 218 (308)
+.++..|+++.+.|++.+... .+.++|..+.+++.+|++. ++++.++.+..
T Consensus 278 ~~~~~lG~s~~~~G~~~~~~~-v~~i~g~~~~~~~~~~~~~--r~~l~~~~~l~ 328 (468)
T TIGR00788 278 ATTQCLPGGPSFSGMSKVVGN-LGSLCGVGGYDRFLKTFPY--RLLFGVTTLLY 328 (468)
T ss_pred EEcccCCCCcchhhhHHHHHH-HHHHHHHHHHHHHHhhCCH--HHHHHHHHHHH
Confidence 344578999999998876544 3445666666666666553 34444433333
No 117
>KOG0252|consensus
Probab=97.80 E-value=3.9e-05 Score=72.68 Aligned_cols=204 Identities=13% Similarity=0.163 Sum_probs=118.0
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
+|-++-||++.++..|...++.|+..++.+.++..+|...|.+++-.+...|...-..+ .++.+.+ +.||+.|.+..
T Consensus 156 iGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~-~~~~~ld--~vWRl~~glg~ 232 (538)
T KOG0252|consen 156 IGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP-STYPHLD--GVWRIIFGLGA 232 (538)
T ss_pred ccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC-CCchHHH--HHHHHHHHHHH
Confidence 57788999999999999999999999999999999999998888887776554321111 1122223 56999876654
Q ss_pred HHHHHHHHHHHhccCCCCCCCCccC----C---------ccc-ccCCCccc-cc---cCCCCCCcchHHHHHhhcChHHH
Q psy11785 81 VFLMLAAVAMFMFPKTLTKASPVNG----T---------TTV-ATLPTKKE-SN---QKNPSLKDFPKAVKRLLKNDILM 142 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p~~~~~~~----~---------~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~Ll~n~~f~ 142 (308)
+..++ .+.++-.+|++++... + +.. ..+.+++. +. ..+.+.+.+.+-..+. .-+..+
T Consensus 233 vpa~~----~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Ll 307 (538)
T KOG0252|consen 233 VPALL----VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLL 307 (538)
T ss_pred HHHHH----HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHH-HHHHHH
Confidence 44433 3344445555544221 0 000 00000000 00 0111112222211111 223445
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccc--------cchhhhhhhhHHHhhhhheehhhccCCccchhHH
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM--------VSGVGGILVMGIGIILSGVFILKFKPNARFVAAW 213 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl--------~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~ 213 (308)
..++..+..-.++|+...+...++++ .|+.+++..+ .-.++...+.+-|..++.+++|+.|++..++..+
T Consensus 308 gt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF 385 (538)
T KOG0252|consen 308 GTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGF 385 (538)
T ss_pred HHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhH
Confidence 56666777778888888888888774 5666665443 0011112223447778889999999775555444
No 118
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.76 E-value=0.00025 Score=67.40 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=63.4
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccch
Q psy11785 131 AVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFV 210 (308)
Q Consensus 131 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~ 210 (308)
...+++|||.++...+..++.......+.+|.+.|+++.-|.+....+.+...- ..+=+.-.++.+++.+|++.+ ++
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~-~~aEi~~f~~~~~~~~r~g~~--~l 275 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALG-VVAEIPFFFFSGRFLKRFGIK--WL 275 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHhcCHH--HH
Confidence 346899999998888888888888889999999999987667767666544322 222344556789999999854 55
Q ss_pred hHHHHHHHHHHH
Q psy11785 211 AAWIAITAVLYA 222 (308)
Q Consensus 211 ~~~~~~~~~~~~ 222 (308)
+.++.+..++-.
T Consensus 276 l~~a~~~~~vR~ 287 (400)
T PF03825_consen 276 LLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHH
Confidence 555555544443
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.71 E-value=0.00012 Score=69.66 Aligned_cols=73 Identities=12% Similarity=0.125 Sum_probs=62.1
Q ss_pred HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
..++||.++...+..++...+...+..++|.|+++++|+|+.+.|++.+...+ +..++.++.|++.||+++|.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~i~~~~~G~l~Dr~g~r~ 77 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSL-FALLFQPLYGLISDKLGLKK 77 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchH
Confidence 45678888888888888888888899999999999999999999998876554 45778889999999999663
No 120
>KOG4686|consensus
Probab=97.66 E-value=0.00039 Score=62.38 Aligned_cols=181 Identities=16% Similarity=0.158 Sum_probs=105.2
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|+-.+-..-.+|..-||+.||....+|+..++.-+|..+-+.+-+++.+.-.+. .......-.|-| +-|- .
T Consensus 149 GgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~-----~~~~ghT~LG~~-l~~~---~ 219 (459)
T KOG4686|consen 149 GGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRM-----FPGVGHTLLGLW-LCFE---V 219 (459)
T ss_pred CchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHh-----cccchHHHHHHH-HHHH---H
Confidence 333344455678888999999999999999999999888777766665421000 000011123332 2222 1
Q ss_pred HHHHHHHH-HHhccCCCCCCCCcc-CCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785 82 FLMLAAVA-MFMFPKTLTKASPVN-GTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY 159 (308)
Q Consensus 82 ~~ll~~i~-~~~~p~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 159 (308)
......+. ...+- +.++..++ ..+| + ....+++++.|.. --.|.||...+..++.+.+++-|.
T Consensus 220 ~tc~~slical~lg--~~D~rAerilh~e-----~--g~~Ge~pkLtdv~------~f~ppfw~~~iicv~yyva~fPFi 284 (459)
T KOG4686|consen 220 KTCKQSLICALSLG--LSDDRAERILHLE-----E--GFLGEEPKLTDVN------TFYPPFWVLVIICVLYYVAWFPFI 284 (459)
T ss_pred HHHHHHHHHHHHhh--hhhhHHHHHHhhh-----c--CcccCCccccccc------ccCccHHHHHHHHHHHHHHHHHHh
Confidence 11111111 11000 00111100 0011 0 0000111122210 013678888888899999999999
Q ss_pred hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+..|.++++.||+|+..++-+.+.+-..+ .+-+.+-|.++||+|.+.
T Consensus 285 ~lg~~fF~~rfGlS~~~a~~i~s~vy~Is-av~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 285 TLGPMFFQKRFGLSAVSAGNILSTVYGIS-AVLSPVFGAISDKYGFNL 331 (459)
T ss_pred hhhHHHHHHhhCCChhhccchhhhhhhhh-hhhhhhHHHhHhhhccee
Confidence 99999999999999999998776655544 345667789999999764
No 121
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.56 E-value=0.00025 Score=66.81 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=58.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
||.++......++.+..+..+..++|.|+++++|+++.+.|++.+...+ ...++.++.|++.||+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l-~~~i~~~~~G~l~Dr~grr 68 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISL-FSILFQPLFGLISDKLGLK 68 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH
Confidence 5777888888888888889999999999999999999999998776554 4577888999999999865
No 122
>KOG0255|consensus
Probab=97.48 E-value=0.00094 Score=65.41 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=43.1
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
+.++.++++..++.|++++++|+.++.+ ......|+.+++.+++++.+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 4567788999999999999999999999 88889999999999998875
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.44 E-value=0.00017 Score=56.29 Aligned_cols=48 Identities=23% Similarity=0.279 Sum_probs=42.3
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
+..++...+++.|.+|+++|++..++......+|..+||.+++++.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 113 (141)
T TIGR00880 66 AFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF 113 (141)
T ss_pred HHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence 345567788999999999999999999999999999999999988753
No 124
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.42 E-value=0.00027 Score=68.66 Aligned_cols=75 Identities=12% Similarity=0.064 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHH--hCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCCccchhHHHHHH
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQ--FRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPNARFVAAWIAIT 217 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~--~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~~~~~~~~~~~~ 217 (308)
++...+..+++...+++...++|.|++++ +|++..+++++.+...+ +..++.+++|++.|| +|+| +.+.++.+.
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~-~~~~~~~~~G~laDr~~G~~--~~l~~~~~~ 88 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSA-LVYLLTSVGWWFGDRVWGTK--KTMVLGGIV 88 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH-HHHHHHhhHHHHHHhhcchH--HHHHHHHHH
Confidence 34555667778899999999999999988 99999999998876554 467889999999999 7865 444443333
Q ss_pred H
Q psy11785 218 A 218 (308)
Q Consensus 218 ~ 218 (308)
.
T Consensus 89 ~ 89 (475)
T TIGR00924 89 L 89 (475)
T ss_pred H
Confidence 3
No 125
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.41 E-value=0.0025 Score=62.12 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=52.8
Q ss_pred ccccccccchhhhcCccCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANR--ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV 79 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~--~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~ 79 (308)
|.+...+...+++.|.+|++ +|....++.+....+|..+||++.+++.+.+ +|+.+|.+.
T Consensus 113 G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------------------Gw~~~F~ia 174 (493)
T PRK15462 113 GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------------------SWAMGFGLA 174 (493)
T ss_pred hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------------------ChHHHHHHH
Confidence 44555566678999999876 6888999999999999999999999987643 378888887
Q ss_pred HHHHHHH
Q psy11785 80 AVFLMLA 86 (308)
Q Consensus 80 g~~~ll~ 86 (308)
++..++.
T Consensus 175 aigm~l~ 181 (493)
T PRK15462 175 AVGMIAG 181 (493)
T ss_pred HHHHHHH
Confidence 6644433
No 126
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.39 E-value=0.0055 Score=58.19 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=57.6
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccc----ccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 130 KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT----ANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 130 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~----agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
+..++++|+|.||...+........+..+-...|.|+...+. ++.+ .|.+.+ +.+..=++...+..++++|+|.
T Consensus 211 ~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~-~~~~g~~~~G~l~s-~~v~~E~~~m~~~p~li~rig~ 288 (412)
T PF01306_consen 211 KDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ-SAGQGNQMYGYLWS-VQVFLEALMMFFSPWLINRIGA 288 (412)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccChhHHhHHHH-HHHHHHHHHHHHHHHHHHhcCh
Confidence 557899999999988887766667777777778888887664 3322 333322 2222335667788999999985
Q ss_pred CccchhHHHHHHHHHHH
Q psy11785 206 NARFVAAWIAITAVLYA 222 (308)
Q Consensus 206 ~~~~~~~~~~~~~~~~~ 222 (308)
| +.+.+..+...+-.
T Consensus 289 k--~~Lllag~i~~iRi 303 (412)
T PF01306_consen 289 K--NLLLLAGVIMAIRI 303 (412)
T ss_dssp H--HHHHHHHHHHHHHH
T ss_pred H--hHHHHHHHHHHHHH
Confidence 5 55444444444443
No 127
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.32 E-value=0.0083 Score=58.15 Aligned_cols=42 Identities=7% Similarity=-0.055 Sum_probs=36.1
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
+=.++..|.++.+|..|..+++.++..+|..+|+.+..++.+
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999999999999999999999999888888777664
No 128
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.30 E-value=0.00064 Score=66.24 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc-cCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF-KPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~-~~~ 206 (308)
.++........+.+.+|++..++|.|+++++|++..+++.+.+... ....++.+++|++.||+ |+|
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~-~~~~l~~ligG~LaDRilGrr 76 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYC-SLVYVTPILGGFLADKVLGNR 76 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCcH
Confidence 3445556667788899999999999999999999999998876554 34567889999999998 755
No 129
>PRK10054 putative transporter; Provisional
Probab=97.29 E-value=0.00086 Score=63.38 Aligned_cols=65 Identities=17% Similarity=0.153 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++...+..++.....+....++|.|+++++|++..+.|++.+...+ ..+++.++.|++.||+++|
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~g~k 73 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALT-IGVVFSLGFGILADKFDKK 73 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCcc
Confidence 4455566677777788888999999999999999999998765544 4567788999999999875
No 130
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.24 E-value=0.00074 Score=66.07 Aligned_cols=73 Identities=10% Similarity=0.034 Sum_probs=55.9
Q ss_pred HHhhcChH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCC
Q psy11785 133 KRLLKNDI-LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPN 206 (308)
Q Consensus 133 ~~Ll~n~~-f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~ 206 (308)
.+++++|. ++...+..+++...++++.+++|.|+++++|++..+++...+.... ......+++|++.|| +|+|
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~~~~G~LaDr~~G~r 88 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSA-LVYGLVAIGGWLGDKVLGTK 88 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccchH
Confidence 45567774 7777778888999999999999999999999999988776554322 223334689999999 5865
No 131
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.23 E-value=0.00092 Score=61.69 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++...++....+...+.+..++|.++++++|+|+.+.+++.+...+ +.+++.++.|++.||+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r 67 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVL-AGAVLRIILGFLVDKFGPR 67 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHH-HHHHHHHHHHHHHHHhCch
Confidence 4456666677777888899999999999999999999998766544 5678899999999999866
No 132
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.21 E-value=0.00026 Score=72.30 Aligned_cols=74 Identities=9% Similarity=0.049 Sum_probs=58.9
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
++.++...+++.|++|+++|++++|+..++..+|.++||++++.+.+.. .+..|++.+++.
T Consensus 663 ~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-------------------~~~pf~i~a~~l 723 (742)
T TIGR01299 663 IAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-------------------KAAPILFASAAL 723 (742)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHH
Confidence 3456677889999999999999999999999999999999999886531 245677777776
Q ss_pred HHHHHHHHhccCC
Q psy11785 84 MLAAVAMFMFPKT 96 (308)
Q Consensus 84 ll~~i~~~~~p~~ 96 (308)
++.++..+++||+
T Consensus 724 ll~~ll~~~LPET 736 (742)
T TIGR01299 724 ACGGLLALKLPDT 736 (742)
T ss_pred HHHHHHHHhCCCC
Confidence 6666666666654
No 133
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.17 E-value=0.0014 Score=61.55 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.+....+...............+|.++++++|+|..+.|++.+...+ +..++.++.|++.||+++|
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~-~~~i~~~~~G~l~Dr~g~r 81 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYL-ATLLSRPHAGRYADTLGPK 81 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH-HHHHhchhhHhHHhccCCc
Confidence 444555666666666666677789999999999999999998876654 4577889999999999976
No 134
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.14 E-value=0.001 Score=63.14 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=58.2
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 136 LKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 136 l~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+||+.|+...+..++.++.+..+..|.|.+|++.-|+|+.+.|++++...+ ..++..++.|.+.||++.|.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~-~~l~~qp~~G~i~Dklg~kK 74 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSL-FALLAQPVYGFISDKLGLKK 74 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHTHHHHHHHHHHCTTCS
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHH-HHHHHHHhHHHhcchhhhhH
Confidence 468889888888888899999999999999999899999999999886554 45666778899999999763
No 135
>PRK12382 putative transporter; Provisional
Probab=97.13 E-value=0.0012 Score=61.97 Aligned_cols=67 Identities=7% Similarity=0.109 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.++...++.++...........+|.|+++++|+|+.+.|++.+...+ +..++.++.|+++||+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~-~~~i~~~~~G~l~Dr~g~r 81 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFL-ATVLTRGYAGRLADQYGAK 81 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHH-HHHHHhhhhhHHHHhhcch
Confidence 334444455555566666667789999999999999999998876655 4567788999999999866
No 136
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.02 E-value=0.00058 Score=65.13 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=41.5
Q ss_pred cccccchhhhcCccCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhhccc
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITI-GVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~-~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
...+....++.|.+|+++|++++|+.+ +...+|.++||+++|++.+.+
T Consensus 324 ~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~ 372 (418)
T TIGR00889 324 FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 445667788999999999999999997 678899999999999998753
No 137
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.02 E-value=0.0049 Score=59.03 Aligned_cols=99 Identities=7% Similarity=0.112 Sum_probs=70.6
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchh
Q psy11785 132 VKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVA 211 (308)
Q Consensus 132 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~ 211 (308)
++.-+++|.|. ..++..+.++.+-+|...+-.|+.++ |+++...|.+-+.-. ...+.|+++..++.+|+|+. +..
T Consensus 252 w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~ga-v~Gl~gT~~~p~l~~riGlv--r~G 326 (432)
T PF06963_consen 252 WRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGA-VFGLLGTWVYPWLMKRIGLV--RAG 326 (432)
T ss_pred HHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch--hhH
Confidence 34456677765 56777777777888888999999998 999999988765433 34678999999999999965 444
Q ss_pred HHHHHHHHHHHHHHhHHHhcCCCC
Q psy11785 212 AWIAITAVLYALGMGILTFIGCPM 235 (308)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~C~~ 235 (308)
.+++......+.+....++...++
T Consensus 327 ~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 327 LWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 555666665555544445555543
No 138
>KOG2325|consensus
Probab=96.81 E-value=0.013 Score=56.57 Aligned_cols=44 Identities=30% Similarity=0.331 Sum_probs=36.5
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
...-.+|+.|....++|.++++....+..+|.++||.++..+..
T Consensus 147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 35668999999999999999999988888888888877776654
No 139
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.80 E-value=0.0026 Score=45.80 Aligned_cols=58 Identities=22% Similarity=0.357 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..++.+.+...+.-|+|.|++ +.|+++.+.|++.++..+ ..+++.++.|.++||++.+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~-~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPL-IRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCcc
Confidence 345566677778889999998 599999999998876544 3578899999999999854
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.66 E-value=0.0056 Score=57.96 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=58.5
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 131 AVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 131 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+++.+.||+.+....+..++...........+|.+.++ ++.++.+.|++.+...+ +.+++.++.|++.||+++|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l-~~~~~~~~~G~l~dr~g~~~ 83 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGG-AMFIGLMVGGVLADRYDRKK 83 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH-HHHHHHHhhHHHhhhcCCce
Confidence 44555678988888787777777777778888988765 56799999988776655 45778899999999998763
No 141
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.63 E-value=0.0043 Score=59.03 Aligned_cols=73 Identities=16% Similarity=0.235 Sum_probs=53.1
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHH-HHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGV-RILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~-~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
.+..+..|+++++|++.|+.+.+++.+. .++|.++|.++||++.+.|. .+..-.|...|.+.+++.+
T Consensus 318 ~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g------------~~~~~~~~~~~~v~a~~~~ 385 (400)
T PF03825_consen 318 FHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG------------ARGMFDWSAVFLVFAVMAL 385 (400)
T ss_pred HHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc------------chhhhhHHHHHHHHHHHHH
Confidence 4567789999999999999999998864 68999999999999988652 1222234455555555554
Q ss_pred HHHHHH
Q psy11785 85 LAAVAM 90 (308)
Q Consensus 85 l~~i~~ 90 (308)
+..+.+
T Consensus 386 ~~~~~f 391 (400)
T PF03825_consen 386 VILVLF 391 (400)
T ss_pred HHHHHH
Confidence 444443
No 142
>KOG0253|consensus
Probab=96.61 E-value=0.056 Score=50.57 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=48.2
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
-++ +|.-.++-.|.-|..+|...+=.. +.+.+|.++.-.+.-.....+ +|+.-.+..+..
T Consensus 180 ~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~------------------gwr~~l~~~~~p 239 (528)
T KOG0253|consen 180 VGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF------------------GWRYLLFTSSTP 239 (528)
T ss_pred CCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh------------------hHHHHHHHHHhH
Confidence 344 677778888888988888765555 778888888877766555432 243333344455
Q ss_pred HHHHHHHHHhccCC
Q psy11785 83 LMLAAVAMFMFPKT 96 (308)
Q Consensus 83 ~ll~~i~~~~~p~~ 96 (308)
..+.+...+..||.
T Consensus 240 l~~~a~f~~w~~ES 253 (528)
T KOG0253|consen 240 LMFAARFLVWVYES 253 (528)
T ss_pred HHHHHHHHhhcccC
Confidence 55566666666665
No 143
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.55 E-value=0.0069 Score=59.15 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~ 206 (308)
.++...+..+.+.+.+|++..+++.|+++.+|++..+++.+.+..... ..+..+++|++.|| +|+|
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~-~~~~~~~~G~laDr~~G~r 81 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAAL-VYGLISIGGYVGDHLLGTK 81 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhhHHHhhhhccchH
Confidence 344555667788999999999999999999999999988766554332 34456789999999 8865
No 144
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.52 E-value=0.058 Score=52.60 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=30.9
Q ss_pred hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
.++..|.++.+|..|+.+++.++..+|.++|..+..++.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999988877777666655555544
No 145
>cd01328 FSL_SPARC Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin. The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.
Probab=96.51 E-value=0.0015 Score=47.83 Aligned_cols=28 Identities=25% Similarity=0.635 Sum_probs=20.8
Q ss_pred CCCCCCccCCCCCcceeeCCCCceecCccc
Q psy11785 254 CATTHGCECDHSKFNPICGGDGRTYFSACH 283 (308)
Q Consensus 254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~ 283 (308)
|... |.=..+.++||||+||.||=|.||
T Consensus 25 C~~~--Cp~~~~~~~~VCGsDg~TY~s~C~ 52 (86)
T cd01328 25 CIDP--CPEEVDDRRKVCTNDNETFDSDCE 52 (86)
T ss_pred cCCc--CCCCCCCCCceeCCCCCCcccHhH
Confidence 4444 333334568899999999999997
No 146
>PRK11043 putative transporter; Provisional
Probab=96.51 E-value=0.0091 Score=56.11 Aligned_cols=60 Identities=12% Similarity=0.188 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhHHHHH--HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 146 ASSVLHILPIAGLYTFLPKY--FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 146 l~~~~~~~~~~~~~~~~P~y--l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+..........+...+.|.+ +++++|+++.+.+++.+... .+..++.++.|++.||+++|
T Consensus 10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~g~r 71 (401)
T PRK11043 10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFL-AGFALGQLLWGPLSDRYGRK 71 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHhhhhHHhhcCCc
Confidence 33333444445555566655 67789999999999877654 35678899999999999876
No 147
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.50 E-value=0.0025 Score=59.80 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=54.5
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
.+..+|...+++.|..+++++++.+++......+|.++||.++|++.+.+ +|+..|++.+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------------------g~~~~f~~~~~~ 386 (408)
T PRK09874 325 DGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------------------GFRAVFLVTAGV 386 (408)
T ss_pred hHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc------------------chhHHHHHHHHH
Confidence 34455666777888889999999999999999999999999999987632 266677777766
Q ss_pred HHHHHHHHH
Q psy11785 83 LMLAAVAMF 91 (308)
Q Consensus 83 ~ll~~i~~~ 91 (308)
.++.++..+
T Consensus 387 ~l~~~~~~~ 395 (408)
T PRK09874 387 VLFNAVYSW 395 (408)
T ss_pred HHHHHHHHH
Confidence 665554433
No 148
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.45 E-value=0.0039 Score=58.35 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=52.9
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL 83 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ 83 (308)
...+|...+++.|.+|+++++.+.+.+.....+|.++||.++|++.+.+ +|+..|++.+...
T Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~------------------g~~~~f~~~~~~~ 361 (381)
T PRK03633 300 FTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY------------------SDNLLFIMIASVS 361 (381)
T ss_pred HhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CccHHHHHHHHHH
Confidence 4567888888999999988888888888889999999999999998754 2455677766665
Q ss_pred HHHHHHH
Q psy11785 84 MLAAVAM 90 (308)
Q Consensus 84 ll~~i~~ 90 (308)
++..+.+
T Consensus 362 l~~~~~~ 368 (381)
T PRK03633 362 FIYLLML 368 (381)
T ss_pred HHHHHHH
Confidence 5544333
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.44 E-value=0.0075 Score=57.67 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=52.8
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 130 KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 130 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.++++ +++.++...+.....+.....+....|.+ ++ +|+++.+.+++.+...+ +..++.++.|++.||+++|
T Consensus 19 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~g~~ 91 (438)
T TIGR00712 19 PTYKRL-RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISI-AYGFSKFIMGSVSDRSNPR 91 (438)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHH-HHHHhhhccchhhhccCCc
Confidence 345555 56676666666666666666667777754 44 59999999988765544 5678899999999999965
No 150
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.42 E-value=0.0004 Score=66.96 Aligned_cols=49 Identities=14% Similarity=-0.035 Sum_probs=42.7
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.+...+...+++.|.+|++++++++|++++...+|.++||.++|++.+.
T Consensus 347 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 347 FGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred hchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 3445567788999999999999999999999999999999999988753
No 151
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.41 E-value=0.01 Score=56.11 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785 144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL 220 (308)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~ 220 (308)
.....++...+.+....++|.|+++++|+|+.+.|+..+...++. .+..+++|++.||+++| +.+..+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~-~~~~~~~G~l~dr~g~k--~~l~~~~~~~~~ 88 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQ-QGLGIFGGAIADRFGAK--PMIVTGMLMRAA 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHHHhhhhHHHHHhCch--HHHHHHHHHHHH
Confidence 335556667777888889999999999999999999887655544 34467889999999864 444444443333
No 152
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.39 E-value=0.011 Score=55.61 Aligned_cols=69 Identities=9% Similarity=-0.057 Sum_probs=53.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
|.+.+...+..++.......+...+|.|+++++|+|+++.|++.....+.+..++.+.+|+ .||+++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~ 82 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRK 82 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccchh
Confidence 4444555555666666777778889999999999999999998655556667788888888 99998764
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.30 E-value=0.0089 Score=57.14 Aligned_cols=66 Identities=14% Similarity=0.213 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+.++...+..+..+...+.+..++|.+.++ +|+|+.+.|++.+...+ +..++.+++|++.||+++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~g~r 88 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYI-TYGVSKFVSGIVSDRSNAR 88 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHH-HHHHHHhhhhHHHhhcCCc
Confidence 344455555555666666778889988774 99999999988765544 4577889999999999876
No 154
>PRK03699 putative transporter; Provisional
Probab=96.30 E-value=0.0091 Score=56.17 Aligned_cols=65 Identities=12% Similarity=-0.021 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.++...+..++.......+...+|.+. +++|+|.++.+++.+...+ +..++.+++|++.||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~g~r 72 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNA-GILISIFLNAWLMEIIPLK 72 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhHH
Confidence 344455555666666677777888855 5799999999988765543 6788999999999999865
No 155
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=96.26 E-value=0.0045 Score=56.02 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=44.7
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
+.+...+...+++.|.+|+++|++.+|+......+|..+++.++|.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 278 GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456778889999999999999999999999999999999999999875
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.18 E-value=0.0066 Score=57.50 Aligned_cols=45 Identities=9% Similarity=-0.077 Sum_probs=39.6
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.+...+++.|.+|+++|++++|+......+|.+++|.+.+.+.+.
T Consensus 401 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 401 GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356677889999999999999999999999999999999987653
No 157
>PRK10504 putative transporter; Provisional
Probab=96.16 E-value=0.013 Score=56.41 Aligned_cols=65 Identities=15% Similarity=0.045 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.++...++.++.....+.+..++|.|.++ +|+++.+.+++..... .+.+++.++.|++.||+++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~r 75 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYV-LTVAVMLPASGWLADRVGVR 75 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhchH
Confidence 45566667777777778888899998875 9999999888765443 34577889999999999866
No 158
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.09 E-value=0.0059 Score=56.03 Aligned_cols=48 Identities=10% Similarity=0.102 Sum_probs=42.1
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
+..++...+++.|.+|+++|++++|++.....+|.++||.++|.+.+.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 310 GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344566678899999999999999999999999999999999998764
No 159
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.08 E-value=0.019 Score=55.62 Aligned_cols=69 Identities=6% Similarity=0.009 Sum_probs=54.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
++.++...++....+...+.+....+.+-+..+++|+++.+++.+...+.+ .++.+..|++.||+|.|.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~-al~rip~G~l~Dr~G~R~ 101 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSG-ALLRVPYSFMVPIFGGRR 101 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChH
Confidence 457777888888888888888888888878789999999998877555443 466677799999999773
No 160
>PTZ00207 hypothetical protein; Provisional
Probab=96.04 E-value=0.0072 Score=60.19 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=53.0
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHH-HHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSL-GFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA 80 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~l-G~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g 80 (308)
|++..++.....+.+++| ++||+++|++.++..+|+++ +++..+++.. .|+..|++.+
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--------------------~~~~~fl~l~ 191 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--------------------NTSAYFFFLM 191 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------hHHHHHHHHH
Confidence 455566777888899996 78899999999999999975 6666555431 1445566667
Q ss_pred HHHHHHHHHHHhccCCCC
Q psy11785 81 VFLMLAAVAMFMFPKTLT 98 (308)
Q Consensus 81 ~~~ll~~i~~~~~p~~~p 98 (308)
++.+++++.++.+-+..|
T Consensus 192 vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 192 SFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHHHHHhheeCCc
Confidence 776666666555544433
No 161
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=96.03 E-value=0.0071 Score=56.85 Aligned_cols=46 Identities=13% Similarity=-0.012 Sum_probs=40.9
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
..+...+++.|.+|+++|++.+|+.+....+|.++||.++|++.+.
T Consensus 325 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 325 GQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred HHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 3456678889999999999999999999999999999999998764
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.01 E-value=0.025 Score=54.86 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=38.5
Q ss_pred HHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 152 ILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 152 ~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
....++...++| ++++++|++..+.+++... ...+..++.+++|++.||+++|.
T Consensus 49 ~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~-~~~~~~~~~~~~G~l~dr~G~r~ 102 (476)
T PLN00028 49 FVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIA-SVSGSIFSRLAMGPVCDLYGPRY 102 (476)
T ss_pred HHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChH
Confidence 333444444445 5677899999999876543 34466788999999999999763
No 163
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=95.98 E-value=0.02 Score=53.65 Aligned_cols=53 Identities=6% Similarity=0.056 Sum_probs=38.4
Q ss_pred HHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 152 ILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 152 ~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
......+...+|.+ .+++|+|+.+.++..+...+ +..++.++.|++.||+++|
T Consensus 21 ~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~l~Dr~grr 73 (394)
T PRK11652 21 QMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLL-TYGLSQLFYGPLSDRVGRR 73 (394)
T ss_pred HHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHH-HHHHHHHhhhhHHHhcCCh
Confidence 33333344455654 46799999999988776554 4678889999999999865
No 164
>PRK09848 glucuronide transporter; Provisional
Probab=95.95 E-value=0.02 Score=54.87 Aligned_cols=63 Identities=11% Similarity=0.070 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...++.............+++.|++++.|+++.++|+++....+ ..++..++.|+++||.+.|
T Consensus 12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~~~~ 74 (448)
T PRK09848 12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRV-FDAFADVFAGRVVDSVNTR 74 (448)
T ss_pred hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHhhhhheeeeecCCCC
Confidence 33344444555555566778889999999999999988765544 3466788999999998654
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=95.95 E-value=0.012 Score=53.96 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=42.4
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
..+...+++.|.+|+++|++++|+......+|.++||.++|++.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 5678889999999999999999999999999999999999998764
No 166
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=95.91 E-value=0.026 Score=52.53 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+....++........+.+....|. +++++|++..+.+++.+...+ +..++.++.|++.||+++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~g~r 77 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALI-SRWFGALMFGLWGDRYGRR 77 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhccH
Confidence 3445556666666666666777775 567899999999988765544 5678899999999999865
No 167
>TIGR00898 2A0119 cation transport protein.
Probab=95.88 E-value=0.0099 Score=57.73 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=54.2
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML 85 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll 85 (308)
.++...++..|.+|++.|+.++|+..+...+|.++||.+.+ +.+. .+...|++.++..++
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-------------------~~~~~~~~~~~~~~~ 486 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-------------------WLFLPLVLFGGLALL 486 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-------------------HHhhHHHHHHHHHHH
Confidence 45667788999999999999999999999999999999988 4321 134566666666666
Q ss_pred HHHHHHhccCC
Q psy11785 86 AAVAMFMFPKT 96 (308)
Q Consensus 86 ~~i~~~~~p~~ 96 (308)
.++..+++||+
T Consensus 487 ~~~~~~~lpet 497 (505)
T TIGR00898 487 AGILTLFLPET 497 (505)
T ss_pred HHHHHHcCcCC
Confidence 66666666654
No 168
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=95.84 E-value=0.035 Score=53.35 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=36.6
Q ss_pred HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++...+|. ++++ |+++.+.++......+ +.+++.++.|++.||+++|
T Consensus 47 ~~~~~~p~-l~~~-g~s~~~~g~~~~~~~i-~~~~~~~~~G~l~Dr~g~k 93 (452)
T PRK11273 47 NFALAMPY-LVEQ-GFSRGDLGFALSGISI-AYGFSKFIMGSVSDRSNPR 93 (452)
T ss_pred HHHHhhHH-HHHc-CCCHHHHHHHHHHHHH-HHHHHHhhhhhhhhccCCc
Confidence 45566775 5556 9999999988765544 5678899999999999976
No 169
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.79 E-value=0.21 Score=46.37 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=51.9
Q ss_pred cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT-FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
++.+.++.++++|..+..-+.+.+.-..+|.|.. |.|..-.+. ....-|+++...++ ++++|+.+-.++..|- .
T Consensus 232 ~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~~P~GlIFssFM~-a~MlGS~lf~~l~s~~-~ 306 (354)
T PF05631_consen 232 SFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EELPLGLIFSSFMV-AMMLGSSLFSRLLSKS-L 306 (354)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CCCCchHHHHHHHH-HHHHHHHHHHHHHhCC-C
Confidence 3455677888889888877777776666666654 677643111 11224555544332 3455555554444432 4
Q ss_pred CccchhHHHHHHHHHHHH
Q psy11785 206 NARFVAAWIAITAVLYAL 223 (308)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~ 223 (308)
|....+...+.+..+++.
T Consensus 307 ~~e~~l~~v~~~aa~~l~ 324 (354)
T PF05631_consen 307 RPESLLRYVFAVAAVSLA 324 (354)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 555666666655555443
No 170
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.70 E-value=0.026 Score=53.22 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...++.++.....+....++|.+++ ++|+|+.++|++.+...+ +..++.++.|++.||+++|
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~-~~~i~~~~~g~l~dr~g~k 78 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGI-AAAISAWISGVVAEIIGPL 78 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHH-HHHHHHHHHHHHHHHcCcH
Confidence 3444444444444455567888885 589999999998765544 4578889999999999875
No 171
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.69 E-value=0.34 Score=49.15 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=57.7
Q ss_pred CccccccccchhhhcCccCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRE---SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV 77 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~---~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi 77 (308)
+|.++.-|.-.+...|-+++++ +-.+..+++.+..+|..+++++-.++-+.+... + .+. +|+.+|.
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f---------g-~~~-~~~~aF~ 165 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF---------G-CQD-CYPLAFG 165 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------c-cCc-chHHHHH
Confidence 4677788888889999887543 566778888899999999988888765322100 0 011 4889999
Q ss_pred HHHHHHHHHHHHHHhccCC
Q psy11785 78 LVAVFLMLAAVAMFMFPKT 96 (308)
Q Consensus 78 i~g~~~ll~~i~~~~~p~~ 96 (308)
+.+++.++..+.+....+.
T Consensus 166 i~~i~m~ia~lvf~~g~k~ 184 (654)
T TIGR00926 166 VPAILMILALIVFMAGSKM 184 (654)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 8887776665554443333
No 172
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.64 E-value=0.071 Score=51.49 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=62.8
Q ss_pred CccccccccchhhhcCccCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRE--SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL 78 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~--~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii 78 (308)
+|.+.+=|-..+++.|.+|+++ |-..+++++++..+|..++|++-+++.+.| +|+.+|-+
T Consensus 129 iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~------------------g~~~gF~~ 190 (498)
T COG3104 129 VGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY------------------GWHVGFGL 190 (498)
T ss_pred hccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh------------------CHHHHHHH
Confidence 4666667777888999887663 566778899999999999999999987654 49999999
Q ss_pred HHHHHHHHHHHHHhccCCCCC
Q psy11785 79 VAVFLMLAAVAMFMFPKTLTK 99 (308)
Q Consensus 79 ~g~~~ll~~i~~~~~p~~~p~ 99 (308)
.++...+..+.++..+|....
T Consensus 191 aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 191 AAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred HHHHHHHHHHHHHHccchhcC
Confidence 988777666666666665443
No 173
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=95.62 E-value=0.038 Score=52.55 Aligned_cols=46 Identities=22% Similarity=0.254 Sum_probs=36.5
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...+|. +++++|+|..++|++..... .+..++.+..|++.||+++|
T Consensus 23 ~~l~~~-~~~~~~~s~~~~g~l~s~~~-~g~~i~~~~~g~l~~r~G~r 68 (410)
T TIGR00885 23 NPMVPQ-FQQAFTLTAFQAALVQSAFY-GGYFIMAIPAAIFMKKLSYK 68 (410)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCch
Confidence 355664 58899999999998876543 45678889999999999966
No 174
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.62 E-value=0.017 Score=54.47 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=37.8
Q ss_pred ccccccchhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 4 TAVYTLGIPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 4 a~~~~lg~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
+..+|...+...|.. |++++++..|+.+....++..+||.+.|++.+.
T Consensus 307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~ 355 (393)
T PRK09705 307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI 355 (393)
T ss_pred cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555666 467899999999999999999999999999874
No 175
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=95.58 E-value=0.019 Score=52.27 Aligned_cols=73 Identities=12% Similarity=0.029 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
+..++.......+...+|.++.+++|.|..+.+++.+...+ +..++.++.|++.||+++| +.+..+.+...++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r--~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFL-GSALFSPFAGYLSDRFGRR--RVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHH-HHHHHHHHHHHHHHHS-HH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCe--eeEeehhhhhhhH
Confidence 34445555566677778878888999999999998766544 4577889999999999854 4555555555554
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=95.55 E-value=0.029 Score=53.25 Aligned_cols=65 Identities=8% Similarity=-0.025 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+....+...+.+.-........| .+++++|++..+.|++.+... .+..++.+..|++.||+++|.
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~G~r~ 74 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFY-AAYVICGIPSNIMLAIIGARR 74 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHH-HHHHHHHhhHHHHHHHhChHH
Confidence 33444455555555555666666 788899999999998876554 456788899999999999763
No 177
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.53 E-value=0.047 Score=51.52 Aligned_cols=76 Identities=11% Similarity=-0.023 Sum_probs=50.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785 138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~ 217 (308)
||.|+...++.++....-..+...+|.+ ..+++.++.+.+++.+...++ ..+..+++|++.||+++| +++.++.+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~-~~l~~~~~G~laDr~grr--~vl~~~~~~ 77 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLA-YIVLAPFVGAFADSFPKG--RVMFIANGI 77 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHH-HHHHHhhhhHhhhccCCc--hhhHHHHHH
Confidence 4556666666666665544455555655 457888888888877666554 567788999999999976 444444433
No 178
>PRK03893 putative sialic acid transporter; Provisional
Probab=95.53 E-value=0.031 Score=54.02 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=39.8
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.++..+++.|.+|+++|++.+|+++....+|..+||+++|++.+.
T Consensus 384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 345567889999999999999999999999999999999998764
No 179
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=95.49 E-value=0.027 Score=51.62 Aligned_cols=55 Identities=16% Similarity=0.214 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..+.....+...+| ++++++|++..+.+++.+...+ +..++.++.|++.||+++|
T Consensus 6 ~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r 60 (379)
T TIGR00881 6 AYYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSI-AYGISKFVMGSVSDRSNPR 60 (379)
T ss_pred HHHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHH-HHHhhhhhhhHHHHhhCCe
Confidence 44445566666777 4667899999999988765544 5678889999999999876
No 180
>PRK10133 L-fucose transporter; Provisional
Probab=95.45 E-value=0.051 Score=52.18 Aligned_cols=69 Identities=16% Similarity=0.068 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
+...+.-......+|.+ ++.+|+|..+.+++..... .+..++.++.|++.||+|+| +.+..+.+...++
T Consensus 36 ~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~-~g~~i~~~~~g~l~dr~G~r--~~l~~g~~~~~~~ 104 (438)
T PRK10133 36 FLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFY-FGYFIIPIPAGILMKKLSYK--AGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHH
Confidence 33333445555668876 8899999999999876554 35678889999999999976 4444444433333
No 181
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=95.39 E-value=0.032 Score=51.50 Aligned_cols=60 Identities=10% Similarity=-0.085 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
..++..........++|.|+++++|.|+.+.|++.+...+. ..+..++.|++.||+++|.
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~Dr~g~r~ 64 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIV-GIAVSQLLATRSDYQGDRK 64 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCch
Confidence 34455556666778899999999999999999987655443 3455677899999998653
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=95.37 E-value=0.043 Score=51.34 Aligned_cols=73 Identities=7% Similarity=0.129 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI 216 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~ 216 (308)
.++...+..+.....-..+...+|.+ ++++|++..+.|++.+...+ +..++.++.|++.||+++| +.+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~g~r--~~~~~~~~ 76 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYAL-GVVVGAPIIALFSSRYSLK--HILLFLVA 76 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHH-HHHHHHHHHHHHHccCccH--HHHHHHHH
Confidence 34455555555555556677778875 45799999999988766544 5678899999999999865 44443333
No 183
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=95.22 E-value=0.065 Score=50.16 Aligned_cols=64 Identities=14% Similarity=0.069 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..+..+...........+...+|.+.+ ++|.|..+.++..+... .+..++.++.|++.||+++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~l~Dr~g~r 68 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAA-DLNASEAQLHIAFSVYL-AGMAAAMLFAGKIADRSGRK 68 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHH-HhCCCHHHHHHHHHHHH-HHHHHHHHhHhHHHHHhCCh
Confidence 334444455555566666777888665 58999999988766543 35677889999999999865
No 184
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=95.11 E-value=0.068 Score=49.41 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=38.2
Q ss_pred HHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 153 LPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 153 ~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.....+...+|. +++++|+|..+.+++.+... .+..++.++.|++.||+++|
T Consensus 19 ~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~d~~g~r 70 (385)
T TIGR00710 19 LGIDMYLPAFPE-IAADLSTPASIVQMTLTLYL-LGFAAGQLLWGPLSDRYGRR 70 (385)
T ss_pred HHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHhhhhHHHhcCCh
Confidence 333444445665 45679999999998876554 35678899999999999865
No 185
>PRK09669 putative symporter YagG; Provisional
Probab=95.09 E-value=0.046 Score=52.32 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
..++..........+.+|++.|+.+.+|+|+..+|+++.+..+. -.+..++.|+++||.+.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~-dai~dp~~G~lsD~~~~ 74 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVL-DAVTDPLMGALVDRTRT 74 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHcccceeeEeeecCCC
Confidence 44444444555666778999999999999999999887655443 35667889999999654
No 186
>PRK12307 putative sialic acid transporter; Provisional
Probab=95.09 E-value=0.069 Score=50.47 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
....+.........+.....+| ++++++|+|..+.+++.+... .+..++.++.|++.||+++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~-~~~~l~~~~~g~l~dr~g~r 83 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAF-IGRPFGGALFGLLADKFGRK 83 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCh
Confidence 3344444444444444444445 456789999999998776544 45678899999999999865
No 187
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.05 E-value=0.042 Score=52.09 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
........+..+++.|+.+.+|+++.++|+++....+ ..++..++.|+++||.+.|
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i-~~~i~~p~~G~lsDr~~~r 65 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARI-LDAITDPIMGNIVDRTRTR 65 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH-HHHhccchheEeeecCCCC
Confidence 3444555667789999999999999999988765544 3467788999999997543
No 188
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.03 E-value=0.028 Score=54.06 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=26.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 21 RESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 21 ~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
++++...+..+....+|..+|-.++|.+.+.
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 3478888899999999999999999988763
No 189
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.99 E-value=0.061 Score=54.32 Aligned_cols=73 Identities=21% Similarity=0.141 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHH
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALG 224 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~ 224 (308)
.+......++....-.-+|++|++++.+.|++.+...+ +..++.++.|++.||++++ +.+.++.+...++.++
T Consensus 42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i-~~~~~~i~v~~~~~r~~r~--~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEI-GNLLLIIFVSYFGTKLHRP--IVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhH-HHHHHHHHHHHhhcccCcc--eEEEecHHHHHHHHHH
Confidence 34444455666555567899999999999998876654 5677788899999998854 4444444444444433
No 190
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=94.94 E-value=0.077 Score=49.94 Aligned_cols=50 Identities=6% Similarity=-0.233 Sum_probs=36.3
Q ss_pred HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...+...+|. +.+++++|+.+.++..+...+ +..++.++.|++.||+++|
T Consensus 29 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~g~r 78 (406)
T PRK15402 29 NDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLA-GGMFLQWLLGPLSDRIGRR 78 (406)
T ss_pred hhhHhcchHH-HHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCh
Confidence 3344445565 446799999999887665443 4577888999999999876
No 191
>KOG3098|consensus
Probab=94.93 E-value=0.59 Score=45.18 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=33.1
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLG 41 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG 41 (308)
+|+|.+++---.|+.+|.++++..+..++..+..-.+-.+|
T Consensus 114 ~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 114 FGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred hhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhh
Confidence 46777788888999999999999999999887766555443
No 192
>PRK03545 putative arabinose transporter; Provisional
Probab=94.82 E-value=0.054 Score=50.76 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=34.9
Q ss_pred chhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 10 GIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 10 g~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
-.+.+.+..| ++|++++|++.....+|.++||+++|++.+.+
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL 356 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3456667655 68899999999999999999999999998753
No 193
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=94.75 E-value=0.054 Score=52.68 Aligned_cols=42 Identities=10% Similarity=0.053 Sum_probs=33.1
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
...+++.+.+|++.|+..+|+.+....++..++|.+.+++.+
T Consensus 362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~ 403 (490)
T PRK10642 362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE 403 (490)
T ss_pred HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999998655566667889988888765
No 194
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.75 E-value=0.074 Score=51.49 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF 203 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~ 203 (308)
...++.+........+.+|++.|+.+.+|+++..+|.++....+. -++..++.|+++||.
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~-dai~dp~~G~lsD~t 69 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIW-DAINDPIMGWIVNNT 69 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHhhchheeehhcC
Confidence 444555556666777888999999999999999999887654433 356677889999965
No 195
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=94.73 E-value=0.11 Score=51.19 Aligned_cols=76 Identities=11% Similarity=0.015 Sum_probs=55.9
Q ss_pred HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHH
Q psy11785 134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAW 213 (308)
Q Consensus 134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~ 213 (308)
.-||||.|..+-++..+...+......-++-++. +..-|+...+++.....+|..+ -.+++|.+.||+++| +++..
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~L-lsl~aG~laDr~drr--rili~ 80 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILL-LSLFAGALADRFDRR--RILIL 80 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccch--HHHHH
Confidence 4578999988888888888887777777776654 4556777778777666677544 457899999999865 44443
No 196
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.70 E-value=3.4 Score=39.38 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=89.2
Q ss_pred hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785 11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAM 90 (308)
Q Consensus 11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~ 90 (308)
.+||--.+++++--++.+..-++..+|-.+|.++|=.+...- +.+. -.+.++-.+.. .+..+..
T Consensus 115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~------------~~sy---~~L~~isl~~~-~~a~~~~ 178 (412)
T PF01770_consen 115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG------------GVSY---FQLNYISLASV-SLALLIA 178 (412)
T ss_pred HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCCH---HHHHHHHHHHH-HHHHHHH
Confidence 578888999999999999888888888888888887776531 0111 12223323222 2222333
Q ss_pred HhccCCCCCCCCccCC--------cccccCCCcccc------ccCCC------CCCcchHHHHHhhcChHHHHHHHHHHH
Q psy11785 91 FMFPKTLTKASPVNGT--------TTVATLPTKKES------NQKNP------SLKDFPKAVKRLLKNDILMYRTASSVL 150 (308)
Q Consensus 91 ~~~p~~~p~~~~~~~~--------~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~Ll~n~~f~~~~l~~~~ 150 (308)
+++|+..+..--.+.. .+.+..++..++ ++... ..+.+.+.+++..+||.++.-++-..+
T Consensus 179 ~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~ 258 (412)
T PF01770_consen 179 LFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAF 258 (412)
T ss_pred HHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 5566632211000100 000000000000 00000 012345667778889999888888777
Q ss_pred HHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhh---hhhHHHhhhhhee
Q psy11785 151 HILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGI---LVMGIGIILSGVF 199 (308)
Q Consensus 151 ~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i---~~~~iG~~lgG~l 199 (308)
...+.+-...+.....++. -+......+-|.+-. ..+.++++..|++
T Consensus 259 atcgy~qv~nYvQ~LW~~v--~~~~~~~vYNG~VeA~~tllgA~~al~~g~v 308 (412)
T PF01770_consen 259 ATCGYYQVINYVQSLWDTV--PPSDNESVYNGAVEAASTLLGAIAALLAGYV 308 (412)
T ss_pred HHhHHHHHHHHHHHHHHhc--CCCCCCcccchHHHHHHHHHHHHHHHHHhHh
Confidence 7777776666666655554 222222222222211 1234456677777
No 197
>TIGR00895 2A0115 benzoate transport.
Probab=94.70 E-value=0.066 Score=49.48 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+........+...+|.+ .+++|+++.+.+++.+... .+.+++.++.|++.||+++|
T Consensus 27 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~ 82 (398)
T TIGR00895 27 LMDGYDLAAMGFAAPAI-SAEWGLDPVQLGFLFSAGL-IGMAFGALFFGPLADRIGRK 82 (398)
T ss_pred HHHHHHHHHHHhhHHHH-hhccCCCHHHHHHHHHHHH-HHHHHHHHHhHHHHHHhhhH
Confidence 33333344455556654 4569999999998776544 35678899999999999854
No 198
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=94.70 E-value=0.063 Score=52.37 Aligned_cols=45 Identities=9% Similarity=-0.019 Sum_probs=39.5
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
..++..++..|.+|.+.|++.+|+.+....+|.+++|.+.+++.+
T Consensus 409 ~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 409 PNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred CCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 345667788999999999999999999999999999999998765
No 199
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=94.69 E-value=0.063 Score=48.98 Aligned_cols=59 Identities=12% Similarity=0.121 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++.++...........+|.|.++ ++.++.+.+++.....+ +.+++.++.|++.||+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~-~~~i~~~~~G~l~dr~g~r 64 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGML-PYVVLSPIAGALADRYDRK 64 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHH-HHHHHHHhhhHHHHhhchh
Confidence 44455555556666778887765 78999999987765544 4567788999999999865
No 200
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=94.61 E-value=0.17 Score=48.82 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=38.6
Q ss_pred HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
-..+...+|. +++.+|++..+.|++.+...+ +..++.+++|++.||+++|.
T Consensus 45 r~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~g~r~ 95 (467)
T PRK09556 45 RKNFKAAQND-MISTYGLSTTELGMIGLGFSI-TYGVGKTLVGYYADGKNTKQ 95 (467)
T ss_pred hcChhhhhHH-HHHhcCCCHHHHHHHHHHHHH-HHHHHHhhhhhHhhccCccc
Confidence 3345555776 556799999999988765543 56788999999999999763
No 201
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.55 E-value=1.6 Score=42.42 Aligned_cols=175 Identities=9% Similarity=0.078 Sum_probs=83.7
Q ss_pred hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11785 12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF 91 (308)
Q Consensus 12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~ 91 (308)
.+..|..+.+|..|..+.+++...++-.++-.+-+++.+.- | .+.++.-+ + .-|..+++.+..+++..+...
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~-~-----~~~~~~~~-~-~~~~~~~vi~~~~~i~~~l~~ 242 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR-D-----ALASEFKD-L-LLQILFIVIVILGIIAILLYR 242 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch-h-----hHhHHHHH-H-HHHHHHHHHHHHHHHHHHHHH
Confidence 45567788889999999888777666655555555444310 0 00011001 1 135556666665555544444
Q ss_pred hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHh
Q psy11785 92 MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGL-YTFLPKYFETQF 170 (308)
Q Consensus 92 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~-~~~~P~yl~~~~ 170 (308)
+.-|...+.+.....+ ...+++.+.+. .+....+.++|+|-....++...+.+....-+ .+|-.+ .+..+
T Consensus 243 ~~~r~il~~~~f~~~~-------~~kk~~~k~k~-~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~-ik~~~ 313 (509)
T COG3202 243 YINRNVLTDPLFYLRA-------KKKKKKKKLKL-GLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSG-IKELY 313 (509)
T ss_pred HHHhhcccCcchhHHH-------hcccccccccC-cHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 4444433322210000 00000111112 35567788888887665555444433333222 112222 22222
Q ss_pred CCCcccc------cccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 171 RLPSHTA------NMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 171 gls~~~a------gl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.-+.... .+++| +...++....+|-+++|.|.-
T Consensus 314 ~~~~~~~~f~~~~~~~tg---vv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 314 PTTNEYTAFMGRFQIWTG---VVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred CChhHHHHHHHHHHHHHH---HHHHHHHHhhhHHHHHHhhHH
Confidence 2222211 12333 223456678899999998854
No 202
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=94.55 E-value=0.1 Score=50.70 Aligned_cols=77 Identities=16% Similarity=0.210 Sum_probs=54.4
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAV 88 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i 88 (308)
....++.+..|+++++...|++.+...+|..+|+.+||++.+.+ + ++.++-+.. |. ..+++.+..++...
T Consensus 371 ~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g------~~~~~~~~~--~~-~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 371 PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-G------ITCDNSNNL--WL-LILGHSLAPLLPLP 440 (468)
T ss_pred cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-C------CCcccccch--HH-HHHHHHHHHHHHHH
Confidence 34788899999999999999999999999999999999998754 2 222222221 33 34455555555444
Q ss_pred HHHhccC
Q psy11785 89 AMFMFPK 95 (308)
Q Consensus 89 ~~~~~p~ 95 (308)
.++++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4556776
No 203
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=94.48 E-value=0.09 Score=56.40 Aligned_cols=72 Identities=14% Similarity=0.074 Sum_probs=48.0
Q ss_pred HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccc--ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT--ANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~--agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.+++++.|....++.++..+...++...+..++...++.+.+. .+++.++..+ +.+++.+++|+++||+++|
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~G~l~Dr~grk 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLL-PFLLLSSPAGFLADKFSKN 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHH-HHHHHhhhHhhhcccccHH
Confidence 4567777777777777766666666666666666667665433 3444443333 3567888999999999865
No 204
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.16 E-value=0.083 Score=51.45 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=46.2
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
-++.++...+++.+..|+++.+.++|++....-....+||++-|.+.+..
T Consensus 394 ~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 394 MGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred hhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999999999999999999998753
No 205
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=94.10 E-value=0.094 Score=50.39 Aligned_cols=41 Identities=7% Similarity=-0.031 Sum_probs=34.5
Q ss_pred ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy11785 8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFC 48 (308)
Q Consensus 8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~l 48 (308)
|...+++.|.+|+++|++++|+..+...+|.++|+.+...+
T Consensus 383 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 383 PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 66788999999999999999999998888888886665544
No 206
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=94.06 E-value=0.17 Score=48.60 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
...++.+............+|.+. +++|.++.+.+++.....+ +.+++.++.|++.||+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r 67 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYML-ANAISIPLTGWLAKRFGTR 67 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHH-HHHHHHHhHHHHHHHhCcH
Confidence 344444555555555666778765 4689999999988765544 4678889999999999865
No 207
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=94.03 E-value=0.14 Score=47.85 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+........+..++|.|+++ +|.|.++.|++.+...+ ..+++.++.|.+.||++++
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l-~~~l~~~~~g~l~dr~g~~ 69 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLV-ARFLGSLLIAPRVKDPSQL 69 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHH-HHHhhhHHHHHHHhhhcch
Confidence 34445556677788999965 79999999998876554 3467788899999999864
No 208
>PRK09952 shikimate transporter; Provisional
Probab=93.96 E-value=0.076 Score=50.86 Aligned_cols=72 Identities=7% Similarity=0.146 Sum_probs=49.7
Q ss_pred cccchhhhcCccCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIG-VRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML 85 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~-~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll 85 (308)
.+...+++.|.+|++.|+...|+.+. +..+|.+++|.+.+++.+... +.|...|++.++..++
T Consensus 361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~----------------~~~~~~~~~~~~~~~i 424 (438)
T PRK09952 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG----------------GSWHSVAIYLLAGCLI 424 (438)
T ss_pred HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC----------------CCchHHHHHHHHHHHH
Confidence 45567889999999999988888654 455899999999999876421 1255556666555555
Q ss_pred HHHHHHhcc
Q psy11785 86 AAVAMFMFP 94 (308)
Q Consensus 86 ~~i~~~~~p 94 (308)
.++..+..+
T Consensus 425 ~~v~~~~~~ 433 (438)
T PRK09952 425 SAMTALLMK 433 (438)
T ss_pred HHHHHHHcc
Confidence 544444443
No 209
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=93.93 E-value=0.02 Score=52.80 Aligned_cols=48 Identities=0% Similarity=-0.194 Sum_probs=40.0
Q ss_pred cccccchhhhcCccCCCCchhHHHHH-HHHHHHHHHHHHHHHHhhhccc
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAIT-IGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~-~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
..++...+++.|.+|+++|+++.++. .....+|..+||.++|++.+.+
T Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 45567788999999999999999984 4566789999999999998753
No 210
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=93.76 E-value=0.2 Score=47.21 Aligned_cols=61 Identities=13% Similarity=0.084 Sum_probs=41.1
Q ss_pred HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785 156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL 220 (308)
Q Consensus 156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~ 220 (308)
+.....+|.+ .+++|+++++.++..+...+ +..++.++.|++.||+++| +.+..+.+...+
T Consensus 37 ~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~Dr~grr--~~~~~~~~~~~~ 97 (394)
T PRK10213 37 FLPVSLLTPM-AQDLGISEGVAGQSVTVTAF-VAMFASLFITQTIQATDRR--YVVILFAVLLTL 97 (394)
T ss_pred HHHHhhHHHH-HHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcccCcH--HHHHHHHHHHHH
Confidence 3444456664 45799999999987765544 4567888999999999865 444444443333
No 211
>KOG3762|consensus
Probab=93.70 E-value=0.13 Score=50.14 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=56.1
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIG-VRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF 82 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~-~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~ 82 (308)
+.+|....+|+.+..||+-++.+.|++.. .-.+|-.+|-++||.+...+. =+..|-+.++.
T Consensus 474 aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg------------------~~ttf~~~giA 535 (618)
T KOG3762|consen 474 ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG------------------ARTTFRIFGIA 535 (618)
T ss_pred HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh------------------hHHHHHHHHHH
Confidence 45677889999999999999999999875 558899999999999987541 14556666666
Q ss_pred HHHHHHHHHhccCCCC
Q psy11785 83 LMLAAVAMFMFPKTLT 98 (308)
Q Consensus 83 ~ll~~i~~~~~p~~~p 98 (308)
.+++.+.+....+.++
T Consensus 536 cl~~l~~~~~iq~~l~ 551 (618)
T KOG3762|consen 536 CLVTLALFISIQLLLK 551 (618)
T ss_pred HHHHHHHHHHhhhhhc
Confidence 6555544444444333
No 212
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=93.58 E-value=0.15 Score=49.04 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=45.1
Q ss_pred hcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy11785 14 IDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMF 93 (308)
Q Consensus 14 i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~ 93 (308)
..|..| +.++...|+.+....+|+.++|.+.|++.+.. .| +.|+..|.+.++..++..+....+
T Consensus 386 ~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~--------------~~-~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 386 SLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQD--------------SK-NVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred hhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCC--------------Cc-hHHHHHHHHHHHHHHHHHHHeeee
Confidence 335554 47888889998888888888888888765421 23 568889998887776655544433
No 213
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=93.35 E-value=0.073 Score=50.41 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=46.1
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
-++.+....+|+.+++|++|.++++|++....-.+..+||.+-+.+.+..
T Consensus 355 ~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT 404 (438)
T COG2270 355 LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT 404 (438)
T ss_pred cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh
Confidence 36788899999999999999999999999999999999999999988764
No 214
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=93.15 E-value=0.13 Score=47.57 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=41.3
Q ss_pred HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785 156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI 216 (308)
Q Consensus 156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~ 216 (308)
..+...+|.+.+ ++|+|+.+.+++.+...+ +..++.++.|++.||+++| +.+..+.+
T Consensus 8 ~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~--~~~~~~~~ 64 (377)
T PRK11102 8 DMYLPALPVIAA-DFGVSAGSVQMTLSAYIL-GFAIGQLFYGPMADSFGRK--PVILGGTL 64 (377)
T ss_pred HHHhccHHHHHH-HhCCCHHHHHHHHHHHHH-HHHHHHHhhchHHhhcCCh--HHHHHHHH
Confidence 345567788776 589999999988766544 4678899999999999854 44443333
No 215
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=92.70 E-value=0.34 Score=45.29 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
..+..+..+.....+..++|.|+++ +|+|..+.|++.+...+ ...++.++.|.+.||+++
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~-~~~~~~~~~g~l~d~~~~ 68 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALI-ARFAGGLFFAPLIKDANH 68 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCc
Confidence 3344455555556677789999974 79999999998765543 446677888999999875
No 216
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=92.46 E-value=0.55 Score=44.69 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785 138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~ 217 (308)
-..|....++....+..=-.|..-.|. +.++.++|.++.|++.+...+ +-.++-++.|.++||.++| ..+.++++.
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i-~YG~sKf~~G~~sDr~npr--~fm~~gLil 103 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSI-TYGVSKFVMGVLSDRSNPR--YFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHH-HHHHHHHHhhhhcccCCCc--eeehHHHHH
Confidence 356666666666666666677777775 555788999999988766544 5678999999999999866 544444444
Q ss_pred HHHHH
Q psy11785 218 AVLYA 222 (308)
Q Consensus 218 ~~~~~ 222 (308)
+.+..
T Consensus 104 sai~n 108 (448)
T COG2271 104 SAIVN 108 (448)
T ss_pred HHHHH
Confidence 44443
No 217
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=92.18 E-value=0.39 Score=45.60 Aligned_cols=48 Identities=8% Similarity=-0.162 Sum_probs=36.1
Q ss_pred HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
+..-+|. +.++++.+..++++..+... .+..++.++.|++.||+|+|.
T Consensus 35 ~~p~l~~-i~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~ 82 (413)
T PRK15403 35 IQPGIIN-VVRDFNADVSLAPASVSLYL-AGGMALQWLLGPLSDRIGRRP 82 (413)
T ss_pred hccCHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHhhhHHHHHcCchH
Confidence 3334454 56689999999988776654 356788899999999999763
No 218
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=92.03 E-value=0.43 Score=44.89 Aligned_cols=51 Identities=20% Similarity=0.105 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
.......-....+|.|++++ |+|.++.|++.. +..| .+..++.|.++||++
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~-~~~~--~~~~~l~g~~~Dr~~ 60 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSL-VGQA--YIFKFLWAPLMDRYT 60 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHH-HHHH--HHHHHHHHHHHHccc
Confidence 34444555667899999976 999999998743 4444 467789999999993
No 219
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=91.94 E-value=0.49 Score=46.07 Aligned_cols=64 Identities=9% Similarity=0.002 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+....++.+....-.....+-+|.+. +.+|.+..+.+++.....+ +..++.+..|++.||+|+|
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~-~~l~~s~~~~~~~~~~~~l-~~~~~~~~~G~l~D~~Grk 71 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLS-MTLGASGNELLWIIDIYSL-VMAGMVLPMGALGDRIGFK 71 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccH
Confidence 34444555555555556777789875 5699999999887765544 4566778899999999876
No 220
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=91.43 E-value=0.63 Score=45.09 Aligned_cols=78 Identities=17% Similarity=0.106 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC----CCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785 141 LMYRTASSVLHILPIAGLYTFLPKYFETQFR----LPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI 216 (308)
Q Consensus 141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~g----ls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~ 216 (308)
+..+...-+.+-+.+||+-.-+-.|++.+++ ++.++|.-+++...-. .=+-.++|||+.||+-- .|+.+.++.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~sl-VY~t~i~GG~laDr~LG-~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSL-VYLTPIIGGWLADRVLG-TRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHH-HHHHHHHHHHHHHHhcc-hhHHHHHHHH
Confidence 4455566788999999999999999999999 9998887665543321 12356789999999732 2344444433
Q ss_pred HHHH
Q psy11785 217 TAVL 220 (308)
Q Consensus 217 ~~~~ 220 (308)
...+
T Consensus 101 l~~i 104 (498)
T COG3104 101 LMAI 104 (498)
T ss_pred HHHH
Confidence 3333
No 221
>KOG4578|consensus
Probab=91.42 E-value=0.075 Score=48.07 Aligned_cols=34 Identities=41% Similarity=1.001 Sum_probs=27.2
Q ss_pred ccCCCCCCCccCCCCCcceeeCCCCceecCccc---cccccc
Q psy11785 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNI 289 (308)
Q Consensus 251 ~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~~ 289 (308)
.+.||-+ |+.++ .|||++||.||-|-|| |-|.+-
T Consensus 31 d~~c~l~----C~~~~-kPvCasDGrty~srCe~qRAkC~dp 67 (421)
T KOG4578|consen 31 DAACQLE----CDDNE-KPVCASDGRTYPSRCELQRAKCGDP 67 (421)
T ss_pred chhhccc----cCCCC-CCccccCCccchhHHHHHHhhcCCC
Confidence 4678877 55555 8999999999999998 778754
No 222
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=91.02 E-value=0.24 Score=46.30 Aligned_cols=73 Identities=18% Similarity=0.296 Sum_probs=54.2
Q ss_pred ccccccccchhhhcCccCCC---CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANR---ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL 78 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~---~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii 78 (308)
|.+.+=|...+++.|-++++ +|-.+..+++.+..+|..+++.+-+++-+.+ +|+.+|.+
T Consensus 46 G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~------------------~~~~~f~i 107 (372)
T PF00854_consen 46 GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY------------------GWFLGFGI 107 (372)
T ss_dssp HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------------------HHHHHHH
T ss_pred ccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc------------------chhhhhhH
Confidence 55666677778888988766 3556777889999999999999988876533 48999999
Q ss_pred HHHHHHHHHHHHHh
Q psy11785 79 VAVFLMLAAVAMFM 92 (308)
Q Consensus 79 ~g~~~ll~~i~~~~ 92 (308)
.++..++..+.++.
T Consensus 108 ~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 108 PAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 88776655444433
No 223
>PRK11010 ampG muropeptide transporter; Validated
Probab=90.91 E-value=0.35 Score=47.21 Aligned_cols=70 Identities=7% Similarity=0.034 Sum_probs=51.3
Q ss_pred ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy11785 8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAA 87 (308)
Q Consensus 8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~ 87 (308)
+...+++.+.++++.++...|++++...+|.++++.++|++.+.+ +|...|.+.+++.++..
T Consensus 335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~------------------G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH------------------GWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------ChHHHHHHHHHHHHHHH
Confidence 344677788899999999999999999999998888899887642 25666766666655554
Q ss_pred HHHHhccC
Q psy11785 88 VAMFMFPK 95 (308)
Q Consensus 88 i~~~~~p~ 95 (308)
+.....++
T Consensus 397 ~~~~~~~~ 404 (491)
T PRK11010 397 LLLLVCRQ 404 (491)
T ss_pred HHHHHHHh
Confidence 44444444
No 224
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=90.78 E-value=0.37 Score=45.15 Aligned_cols=44 Identities=5% Similarity=-0.165 Sum_probs=38.3
Q ss_pred ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785 6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT 49 (308)
Q Consensus 6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll 49 (308)
.++...++..|.+|++.|+...|+.+....+|.+++|++.+.++
T Consensus 297 ~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 297 AYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred hHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 34556688999999999999999999999999999998888776
No 225
>PRK11462 putative transporter; Provisional
Probab=90.69 E-value=0.66 Score=44.83 Aligned_cols=63 Identities=10% Similarity=0.099 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
..-++..........+.+|++.|+.+..|+++..+|.++.+.-+.- ++--++-|+++||.+.|
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~D-ai~Dp~~G~~~D~t~~r 75 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALD-AISDPCMGLLADRTRSR 75 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHH-HHHhhhheehhccCCCC
Confidence 3445555555666667789999999999999999998765443332 45567779999987544
No 226
>PTZ00207 hypothetical protein; Provisional
Probab=90.68 E-value=0.84 Score=45.69 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=42.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 151 HILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 151 ~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
.....|++..+.|. +++++|+|..+.+++.+. ... ..+..+++|++.||+++| ..+.++.+...++
T Consensus 39 ~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~sv-g~~-~g~~~lp~G~L~Dr~G~R--~vllig~ll~~iG 104 (591)
T PTZ00207 39 CTSFMYAFNLISGA-MQARYNLTQRDLSTITTV-GIA-VGYFLLPYSFIYDYLGPR--PIFVLSMTVFCLG 104 (591)
T ss_pred HHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHH-HHH-HHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHH
Confidence 34456677777774 688899999998887653 222 223455789999999966 4444444433333
No 227
>KOG2615|consensus
Probab=90.46 E-value=0.3 Score=45.89 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=47.9
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV 79 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~ 79 (308)
.|--..++....|.++||..+|+..+...++-++||+++|.+..+- ..+++.|+ +||.-+++.
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws---------~~~~~a~~-~~~~L~~~~ 432 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS---------QGAQPAYI-AWGALLLIP 432 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe---------cCCCceee-ehHHHHHHH
Confidence 3445667777889999999999999999999999999999887642 23455564 577655443
No 228
>PRK15075 citrate-proton symporter; Provisional
Probab=90.30 E-value=1 Score=42.97 Aligned_cols=64 Identities=13% Similarity=0.165 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccc-hhhh----hhhhHHHhhhhheehhhccCC
Q psy11785 142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVS-GVGG----ILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~-g~~~----i~~~~iG~~lgG~l~~r~~~~ 206 (308)
....++.++.+.-...+....|. +.++++.+..+.+.+. +... ..+..+|.++.|++.||+|+|
T Consensus 18 ~~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr 86 (434)
T PRK15075 18 LRVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH
Confidence 34555666666666777777785 5556888777654322 1111 111246788899999999965
No 229
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=90.16 E-value=1.1 Score=43.58 Aligned_cols=47 Identities=13% Similarity=0.084 Sum_probs=37.1
Q ss_pred hHHHHHHHHHhCCCccc-ccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 160 TFLPKYFETQFRLPSHT-ANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 160 ~~~P~yl~~~~gls~~~-agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
.+...++.+.+|+|..+ .|.+.+.... +..+..+.+|++.||+|.|.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~y-sYal~qIp~GlLaDrlG~K~ 93 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPY-SHLAVLVPVFLLTDYLRYKP 93 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHH-HHHHHHHHHHHHHHHhCchH
Confidence 33444787899999999 8888765543 56788999999999998763
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=89.94 E-value=0.34 Score=46.11 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehh----hccCC
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFIL----KFKPN 206 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~----r~~~~ 206 (308)
+........+.+++++|+.++.|+++..+|++.....+.. ++-.++-|+++| |+|+|
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~d-ai~dp~~G~~sDr~~tr~Grr 71 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWD-AITDPLIGYLSDRTRTRWGRR 71 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhh-hhcCCcEEEEEeeeccccccc
Confidence 3444455567779999999999999999998765444333 344567899999 55644
No 231
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=89.63 E-value=1.1 Score=42.57 Aligned_cols=71 Identities=15% Similarity=0.033 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhC---CCccccc---ccchhhhhhhhHHHhhhhheehhhccCCccchhHHHH
Q psy11785 142 MYRTASSVLHILPIAGLYTFLPKYFETQFR---LPSHTAN---MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIA 215 (308)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~g---ls~~~ag---l~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~ 215 (308)
+...++..++..-...+....| ++.++++ .+..+.+ ..++ ....+..+|.+++|++.||+|+| +.+..++
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ig~~~~G~l~Dr~Grr--~~l~~~~ 100 (432)
T PRK10406 25 VGASSGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFA-AGFLMRPIGGWLFGRIADKHGRK--KSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCcH--HHHHHHH
Confidence 3444556666665555444444 6666664 4444322 2222 22334468999999999999966 4444433
Q ss_pred H
Q psy11785 216 I 216 (308)
Q Consensus 216 ~ 216 (308)
+
T Consensus 101 ~ 101 (432)
T PRK10406 101 C 101 (432)
T ss_pred H
Confidence 3
No 232
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=89.49 E-value=0.41 Score=44.78 Aligned_cols=41 Identities=10% Similarity=0.041 Sum_probs=33.8
Q ss_pred hhhhcCccCC-CCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 11 IPYIDDNVAN-RESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 11 ~a~i~d~~~~-~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.+++.+..++ ++++..++..++...+|.++||.++|++.+.
T Consensus 325 ~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~ 366 (390)
T TIGR02718 325 YTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR 366 (390)
T ss_pred HHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555 8899999999999999999999999998764
No 233
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=89.46 E-value=0.38 Score=44.23 Aligned_cols=47 Identities=13% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+...+|.+ ++.+|+|.++++++.+... .+..++.++.|++.||+++|
T Consensus 19 ~~~~lp~l-~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~g~r 65 (355)
T TIGR00896 19 VGPLLPQI-RSALGMSFSVAGLLTALPV-LCFAVLAPLAPWLARRFGEE 65 (355)
T ss_pred CcccHHHH-HHHhCCCHHHHHHHHHHHH-HHHHHHHHhHHHHHHHhCch
Confidence 34466764 4579999999999876554 45688899999999999976
No 234
>KOG0637|consensus
Probab=89.24 E-value=3.5 Score=39.74 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=34.6
Q ss_pred ccchhhhcCccCCCCchh-HHHHHHHHHHHHHHHHHHHHHhh
Q psy11785 8 TLGIPYIDDNVANRESPL-YFAITIGVRILGPSLGFILGSFC 48 (308)
Q Consensus 8 ~lg~a~i~d~~~~~~~~~-~~gi~~~~~~~Gp~lG~~lGg~l 48 (308)
.-..+++.|...++++.+ +.+.+..+.++|.++|+.+|++.
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 345788999987776666 99999999999999999999844
No 235
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=88.75 E-value=0.57 Score=50.49 Aligned_cols=47 Identities=6% Similarity=-0.148 Sum_probs=40.6
Q ss_pred ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
+...+...+++.+.+|++++|+++|+.++...+|.++|++++|.+..
T Consensus 349 ~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 349 GLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567888999999999999999999999999999999998864
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=88.74 E-value=1.6 Score=42.57 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh----ccCCc
Q psy11785 149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK----FKPNA 207 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r----~~~~~ 207 (308)
.-..+.+.....+++.|++ .+|+++..++++.....+ ..++..++.|+++|| +|+|+
T Consensus 14 ~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l-~~~i~~Pi~G~lSDr~~sr~GRRr 74 (477)
T TIGR01301 14 AGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPL-SGLLVQPLVGYLSDRCTSRFGRRR 74 (477)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHhHeeehhcCCCCCCCChH
Confidence 3344555666677787875 599999999887655444 456778899999995 77653
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=88.58 E-value=1.1 Score=43.45 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~ 217 (308)
..-++-+...........|+.+|+.+.+|+++..+|.++.+.-+.= ++.-++-|.++||.+.|.-|-.-|.+..
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiD-Ai~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIID-AITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHH-HHhcchheeeecccccccccccHHHHHH
Confidence 3444445555666667889999999999999999999887665543 4566788999998875543433444443
No 238
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=87.95 E-value=0.99 Score=33.04 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=43.2
Q ss_pred HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHH
Q psy11785 155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYAL 223 (308)
Q Consensus 155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~ 223 (308)
=+.|.-.+|. ++++.++|.+++|++.+.. ..+..+|.++..++.++. +.++..+.+++...++.+
T Consensus 8 RFayTplLP~-M~~~~~ls~~~ag~lasaN-y~GYL~GAl~~~~~~~~~--~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 8 RFAYTPLLPL-MQADGGLSLSQAGWLASAN-YLGYLVGALLASRLPRHS--RPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HHHHHhHhHH-HHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHH
Confidence 3455556775 5667899999999876543 456778888877776653 334566666665555543
No 239
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=87.12 E-value=2.2 Score=40.47 Aligned_cols=65 Identities=9% Similarity=0.091 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.++...++....+.+++-+....+ .+.+.+++|+.|.+++.....+.+ .+--+.-|.+.||+|.|
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~G-allRl~~g~l~drfGgR 79 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVG-ALLRLPYGFLTDRFGGR 79 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHh-HHHHHHHHhhhcccCch
Confidence 344444554444445444444444 444899999999998875444433 44456779999999976
No 240
>KOG3762|consensus
Probab=84.44 E-value=0.29 Score=47.86 Aligned_cols=50 Identities=18% Similarity=0.361 Sum_probs=39.0
Q ss_pred HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
+....-+++.|+. |+|+++.+.|.+++...+. .+++.++.|++.||+..+
T Consensus 27 ~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v-~~L~~P~~g~~Adr~r~~ 76 (618)
T KOG3762|consen 27 FGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLV-EFLAAPLWGFLADRYRKR 76 (618)
T ss_pred ccccchHHHHHHH-HcCCCHHHhhhhhhHHHHH-HHHhHHHHHHHHHHHHhc
Confidence 3445556777665 8999999999999876665 467889999999999744
No 241
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=82.17 E-value=3.3 Score=39.29 Aligned_cols=62 Identities=15% Similarity=-0.029 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHH
Q psy11785 161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGM 225 (308)
Q Consensus 161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 225 (308)
-+-+.+++.|+++..+++++.-. ...+..++++..|+++||++.| +-+.+++...+++..++
T Consensus 34 iLip~l~~~f~ls~~~a~liqfa-ff~gYf~~~lpa~~~~kk~gyk--~gi~lgL~l~avg~~lF 95 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFA-FFGGYFIMSLPAGLLIKKLGYK--AGIVLGLLLYAVGAALF 95 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHH-HHHHHHHHhccHHHHHHHhhhH--HHHHHHHHHHHHHHHHH
Confidence 34456788999999999986533 3456678888999999999976 44444444444444433
No 242
>KOG3810|consensus
Probab=81.94 E-value=16 Score=34.38 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=33.2
Q ss_pred hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
++||-.-++|++.-+..|.--++...|-.+|..++-.+++
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 6788889999999999998888888888787777776665
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=81.60 E-value=4.7 Score=38.72 Aligned_cols=76 Identities=21% Similarity=0.423 Sum_probs=53.0
Q ss_pred hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11785 12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF 91 (308)
Q Consensus 12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~ 91 (308)
..+.+..|+..-+...|++.+...+|..++-.+|..+.+.+ + ++.+| +-.-|++ .++..+..++....+.
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~-~------vt~~~--f~~l~~l-ili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELF-G------VTRDD--FSNLWLL-ILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C------CCccc--ccchHHH-HHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999998754 2 23333 3234665 4555555544433444
Q ss_pred hccCCC
Q psy11785 92 MFPKTL 97 (308)
Q Consensus 92 ~~p~~~ 97 (308)
++|++.
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 666643
No 244
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=81.41 E-value=42 Score=31.56 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=21.7
Q ss_pred CccCCCCchhHHHHH-HHHHHHHHHHHHHHHH
Q psy11785 16 DNVANRESPLYFAIT-IGVRILGPSLGFILGS 46 (308)
Q Consensus 16 d~~~~~~~~~~~gi~-~~~~~~Gp~lG~~lGg 46 (308)
|.+|. ++.+.+|.- ......||++||+++.
T Consensus 48 DYvP~-~~~vlfghhf~sIAGaGPI~GPi~aa 78 (376)
T PF02554_consen 48 DYVPT-NKWVLFGHHFASIAGAGPIVGPILAA 78 (376)
T ss_pred CCCCC-chHHhhHHHHHHHhccccchHHHHHH
Confidence 55554 445667764 5577889999999984
No 245
>KOG4686|consensus
Probab=81.04 E-value=5.6 Score=36.36 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=34.8
Q ss_pred hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
..++-.+|+++.|.+.|..+....+|-++-|++.|++++
T Consensus 375 P~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d 413 (459)
T KOG4686|consen 375 PCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIAD 413 (459)
T ss_pred hhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeec
Confidence 345667899999999999999999999999999999875
No 246
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=78.25 E-value=11 Score=33.59 Aligned_cols=26 Identities=15% Similarity=0.456 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC
Q psy11785 71 AWWLGLVLVAVFLMLAAVAMFMFPKT 96 (308)
Q Consensus 71 aWw~~fii~g~~~ll~~i~~~~~p~~ 96 (308)
.|+..+.+.+++.++..+....+-++
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 37777777777776666666666444
No 247
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=77.47 E-value=3.2 Score=35.59 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=41.3
Q ss_pred ccccccccchhhhcCccCC-CCchhHHHHHHH-HHHHHHHHHHHHHHhhhcc
Q psy11785 2 GQTAVYTLGIPYIDDNVAN-RESPLYFAITIG-VRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~-~~~~~~~gi~~~-~~~~Gp~lG~~lGg~ll~~ 51 (308)
+.+...+...+++.|.+|+ ++|+...+.... ...+|..+++++++.+...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 107 GGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred hhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778889999999988 778999998888 6888999999888887653
No 248
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=76.62 E-value=0.81 Score=45.35 Aligned_cols=81 Identities=15% Similarity=0.040 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHH-HH
Q psy11785 146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYA-LG 224 (308)
Q Consensus 146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~-~~ 224 (308)
+..++. ....++..-.=+-+|++|+++++++|++.+..-+. .++..++-.++..|.+ |+| .+..+.+...++. +.
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~-~~~~~~~vsy~g~~~h-rpr-wig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIG-SLVVVLFVSYFGGRGH-RPR-WIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHhhhcC-Ccc-eeeecHHHHHHHHHHH
Confidence 333444 66777777667789999999999999987655442 3333444456655532 333 3333333333333 33
Q ss_pred HhHHHh
Q psy11785 225 MGILTF 230 (308)
Q Consensus 225 ~~~~~~ 230 (308)
.++-|+
T Consensus 86 ~lPhf~ 91 (539)
T PF03137_consen 86 ALPHFL 91 (539)
T ss_dssp ------
T ss_pred hccHhh
Confidence 344443
No 249
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=76.61 E-value=8.6 Score=36.52 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=34.0
Q ss_pred hhhhcCcc--CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 11 IPYIDDNV--ANRESPLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 11 ~a~i~d~~--~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
..+.-+.. .|+.+....++..+...+|.++|-.+||.+++.+
T Consensus 319 ~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~ 362 (394)
T COG2814 319 QGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL 362 (394)
T ss_pred hHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33444443 3788999999999999999999999999998753
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=76.25 E-value=0.52 Score=44.89 Aligned_cols=45 Identities=11% Similarity=0.016 Sum_probs=35.2
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT 49 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll 49 (308)
...++...+..|.+|.+.|++..|+......++.++++.+-..+.
T Consensus 365 g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~ 409 (451)
T PF00083_consen 365 GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLF 409 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344666788899999999999999998887777777766655444
No 251
>KOG2504|consensus
Probab=75.68 E-value=0.79 Score=45.06 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=54.8
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAV 88 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i 88 (308)
+..-.+.|.+..++-+.+.|+......++..+||.+.|++.+.. |.|-..|+.+|+..++.+.
T Consensus 408 l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t-----------------g~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 408 LTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT-----------------GNYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc-----------------CCeeeehhhcChHHHHHHH
Confidence 33457889999999999999999999999999999999765532 2255678888888777776
Q ss_pred HHHhcc
Q psy11785 89 AMFMFP 94 (308)
Q Consensus 89 ~~~~~p 94 (308)
.++..|
T Consensus 471 ~~~~~~ 476 (509)
T KOG2504|consen 471 LLLILR 476 (509)
T ss_pred HHHHhH
Confidence 666665
No 252
>PRK11469 hypothetical protein; Provisional
Probab=74.36 E-value=52 Score=27.78 Aligned_cols=24 Identities=29% Similarity=0.492 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 28 AITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 28 gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
-++.....+.|.+|..+|..+.++
T Consensus 41 l~~g~~q~~m~~~g~~~G~~l~~~ 64 (188)
T PRK11469 41 LIFGAVETLTPLIGWGMGMLASRF 64 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888888877664
No 253
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=71.62 E-value=31 Score=26.04 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 38 PSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 38 p~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
.++.|++.|..+..|.|-.. +.++ | |-+.|++.|+++-+.
T Consensus 51 ~~v~pil~G~~lG~WLD~~~-----~t~~-~---~tl~~lllGv~~G~~ 90 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHY-----PSPF-S---WTLTMLIVGVVIGCL 90 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----CCCc-H---HHHHHHHHHHHHHHH
Confidence 34455555555555554211 1122 2 556677777654433
No 254
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=71.10 E-value=5.8 Score=37.22 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=40.2
Q ss_pred CccccccccchhhhcCccCC-CCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 1 MGQTAVYTLGIPYIDDNVAN-RESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~-~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
+|.+..+|++.+++.|..+. ++.+.--|..+....+=.++||.+-|++-+.
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa 359 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA 359 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh
Confidence 46788899999999998864 4555666677777777789999999998654
No 255
>KOG0253|consensus
Probab=69.10 E-value=6.6 Score=37.23 Aligned_cols=73 Identities=12% Similarity=0.249 Sum_probs=54.7
Q ss_pred cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785 5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM 84 (308)
Q Consensus 5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l 84 (308)
..+..++.|-.|.+|.+-|+..+|.-..+.-+|.++.|++. ...+.-.. +...+.+...+
T Consensus 450 g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~s-------------------l~i~vy~~~~i 509 (528)
T KOG0253|consen 450 GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELSTS-------------------LPIFVYGALFI 509 (528)
T ss_pred chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcccee-------------------ehHHHHHHHHH
Confidence 45677899999999999999999999999999999999998 33332111 23345566666
Q ss_pred HHHHHHHhccCCC
Q psy11785 85 LAAVAMFMFPKTL 97 (308)
Q Consensus 85 l~~i~~~~~p~~~ 97 (308)
+.++...+||-+.
T Consensus 510 lagIavcffPiEt 522 (528)
T KOG0253|consen 510 LAGIAVCFFPIET 522 (528)
T ss_pred HHHHHheeeeecc
Confidence 6677777788653
No 256
>TIGR00901 2A0125 AmpG-related permease.
Probab=68.98 E-value=6.4 Score=36.00 Aligned_cols=42 Identities=14% Similarity=0.092 Sum_probs=30.4
Q ss_pred HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
...+|.+++ ++|+|.++.|++.. ..+|.+ + .++.|.++||++
T Consensus 8 ~~~~~~~~~-~~g~s~~~~g~~~~-~~~~~~-~-~~~~g~~~Dr~~ 49 (356)
T TIGR00901 8 GNTLPYWLR-SKNVSLKTIGFFSL-VGLPYS-L-KFLWSPLVDTVY 49 (356)
T ss_pred HhHHHHHHH-HcCCCHHHHHHHHH-HHHHHH-H-HHHHHHHHhccc
Confidence 345677766 56999999998753 345543 3 778999999984
No 257
>KOG1330|consensus
Probab=68.63 E-value=24 Score=34.32 Aligned_cols=64 Identities=13% Similarity=0.101 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785 142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA 207 (308)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~ 207 (308)
....+...++..==+.... .-+=+|+.|+++.+..|++..... ...++.+++.|++.||++++.
T Consensus 36 ~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~-v~~~i~sPl~gyLadryNR~~ 99 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFI-VVFMIASPLFGYLADRYNRKR 99 (493)
T ss_pred HHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHH-HHHHHHHHHHHHHHhhcCcce
Confidence 3344444444443333333 334477889999999998765543 345677889999999998763
No 258
>COG1971 Predicted membrane protein [Function unknown]
Probab=67.02 E-value=78 Score=26.81 Aligned_cols=54 Identities=13% Similarity=0.157 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
...++..+...++..-..+++ .+...+...+|.+++....+|..+|.++.+.++
T Consensus 112 ~laiatSidal~vG~~~a~lg--------v~i~~~av~iG~~T~il~~~G~~IG~~~g~~~g 165 (190)
T COG1971 112 LLAIATSIDALAVGVGLAFLG--------VNILLAAVAIGLITLILSALGAIIGRKLGKFLG 165 (190)
T ss_pred HHHHHHHHHHHHHhhhHHHhc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455556666655554444443 122223333444444444556655544444443
No 259
>KOG0252|consensus
Probab=66.35 E-value=14 Score=35.87 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=27.0
Q ss_pred hhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHH
Q psy11785 183 VGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYAL 223 (308)
Q Consensus 183 ~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~ 223 (308)
.+...+.++|.++-|++.||+|+| +.....+++.+++.+
T Consensus 91 ~~A~vGti~GQl~FG~lgD~~GRK--~vYG~~liImIi~t~ 129 (538)
T KOG0252|consen 91 AAALVGTIFGQLFFGWLGDKFGRK--KVYGKELIIMIICSA 129 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcch--hhhhHHHHHHHHHHH
Confidence 344567789999999999999976 444444455555443
No 260
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=65.94 E-value=17 Score=34.60 Aligned_cols=79 Identities=22% Similarity=0.230 Sum_probs=55.8
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV 81 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~ 81 (308)
|.+.......+.+-|..++++.+.++|.|.++..++-.+|-++||.+.+.--.+ ...++. -++-..|.+-++
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~------~~~~~~--~aY~~VF~lEa~ 385 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRAL------FGNSPA--LAYGVVFALEAV 385 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccCCcc--hHHHHHHHHHHH
Confidence 344444556788889999999999999999999999999999999987642111 111121 256677777766
Q ss_pred HHHHHHH
Q psy11785 82 FLMLAAV 88 (308)
Q Consensus 82 ~~ll~~i 88 (308)
+.++...
T Consensus 386 ll~~a~~ 392 (403)
T PF03209_consen 386 LLLAALV 392 (403)
T ss_pred HHHHHHH
Confidence 6554433
No 261
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=65.12 E-value=4.7 Score=33.04 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=40.0
Q ss_pred CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy11785 1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFC 48 (308)
Q Consensus 1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~l 48 (308)
+|++++++.-..|+.++.+++++++..|++......+..+|-++.-++
T Consensus 101 ~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 101 FGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999999888887777776665444
No 262
>KOG3555|consensus
Probab=65.10 E-value=3.5 Score=37.91 Aligned_cols=21 Identities=43% Similarity=0.914 Sum_probs=18.5
Q ss_pred CCCCCcceeeCCCCceecCcc
Q psy11785 262 CDHSKFNPICGGDGRTYFSAC 282 (308)
Q Consensus 262 C~~~~~~PvC~~~g~ty~SpC 282 (308)
|+..+-.+|||+||-||=|-|
T Consensus 142 Cpvaq~a~vCGsDghtYss~c 162 (434)
T KOG3555|consen 142 CPVAQPAFVCGSDGHTYSSRC 162 (434)
T ss_pred CCcccccceecCCCCeehhhh
Confidence 666788899999999998877
No 263
>KOG0569|consensus
Probab=65.08 E-value=1.4e+02 Score=29.20 Aligned_cols=29 Identities=10% Similarity=0.358 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 24 PLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 24 ~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
...-+.......+|.++|-.+++++.+-|
T Consensus 59 ~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 59 DLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455666777888888888888887754
No 264
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=64.27 E-value=8.1 Score=34.28 Aligned_cols=53 Identities=19% Similarity=0.315 Sum_probs=37.6
Q ss_pred HHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 151 HILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 151 ~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
.....|.|..+-|. +++++|+|.++.+.+...-. .+..+| ++.|.+.||++++
T Consensus 14 ~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~-~G~~~G-~~~G~l~d~~gp~ 66 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGD-IGSYFG-ILAGLLYDRFGPW 66 (250)
T ss_pred hcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHH-HHhhcc-HHHHHHHHhcchH
Confidence 33456777777776 66799999999887643333 344555 6789999999865
No 265
>PRK15015 carbon starvation protein A; Provisional
Probab=60.44 E-value=1.6e+02 Score=30.00 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=22.8
Q ss_pred CccCCCCchhHHHH-HHHHHHHHHHHHHHHHHh
Q psy11785 16 DNVANRESPLYFAI-TIGVRILGPSLGFILGSF 47 (308)
Q Consensus 16 d~~~~~~~~~~~gi-~~~~~~~Gp~lG~~lGg~ 47 (308)
|.+|.+++ ..+|- +.+....||.+||+++..
T Consensus 79 DYvPt~k~-VLfGHHFasIAGAGPivGPvlAa~ 110 (701)
T PRK15015 79 DYVPTDKK-VLFGHHFAAIAGAGPLVGPVLAAQ 110 (701)
T ss_pred CcCcCCcc-chhHHHHHHHhccCccHHHHHHHH
Confidence 67776665 55565 556778899999999874
No 266
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=59.78 E-value=61 Score=31.96 Aligned_cols=64 Identities=14% Similarity=0.015 Sum_probs=35.3
Q ss_pred CCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHhCCCcccccccchhhhhhhhHH
Q psy11785 125 LKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT-FLPKYFETQFRLPSHTANMVSGVGGILVMGI 191 (308)
Q Consensus 125 ~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~~P~yl~~~~gls~~~agl~~g~~~i~~~~i 191 (308)
+++.-+.+++++|.|....+++.....-.++.+--. ..=|.+| .|++..+-+++. ++.+|.-++
T Consensus 264 i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE--kG~~KE~LAl~~-li~~P~qii 328 (544)
T PF13000_consen 264 IKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE--KGLSKEDLALLV-LIDFPFQII 328 (544)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH--cCCCHHHhHHHH-HHhhhHHHH
Confidence 344556677788888776665555444444332222 2224443 688888876643 444554433
No 267
>KOG3574|consensus
Probab=56.82 E-value=67 Score=30.80 Aligned_cols=76 Identities=9% Similarity=0.065 Sum_probs=44.6
Q ss_pred CCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehh
Q psy11785 124 SLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFIL 201 (308)
Q Consensus 124 ~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~ 201 (308)
++++..+.++++++-|............-.++.+-.+..+.=+. .+|++..+-+++. +..+|.-+++....|++..
T Consensus 250 ~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLl-e~Gv~ke~Lal~~-v~~~plqI~l~~~~gk~ta 325 (510)
T KOG3574|consen 250 GIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLL-EHGVPKEELALIA-VPLVPLQIALPLYIGKWTA 325 (510)
T ss_pred CHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHH-HcCCChhHheeee-eehhhHHHhhhhhheeecC
Confidence 34455566777777776655555445555555555555554443 4799988877765 4445655555555555443
No 268
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=55.00 E-value=64 Score=28.74 Aligned_cols=22 Identities=9% Similarity=-0.026 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHh
Q psy11785 149 VLHILPIAGLYTFLPKYFETQF 170 (308)
Q Consensus 149 ~~~~~~~~~~~~~~P~yl~~~~ 170 (308)
.+....+||....=.+|++++-
T Consensus 188 Av~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 188 AVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHHhcccchHHHHHhCc
Confidence 4456678887777777888764
No 269
>KOG3626|consensus
Probab=54.96 E-value=21 Score=36.73 Aligned_cols=88 Identities=11% Similarity=0.074 Sum_probs=50.7
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchh
Q psy11785 132 VKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVA 211 (308)
Q Consensus 132 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~ 211 (308)
.+++.+.+.|+.......+......++....=+-+|++|+++.++.|++.+..=+ +-.+..++-.|...|.. |+ +.+
T Consensus 89 ~q~~~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~di-g~~l~i~fVsYfG~r~H-rP-r~I 165 (735)
T KOG3626|consen 89 LQRFANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDI-GNLLLIIFVSYFGSRGH-RP-RWI 165 (735)
T ss_pred ceeccCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeeccc-chhhhhHhHHHhccccC-cc-cee
Confidence 4456666777655544444444555777777778999999999999987654332 22233333345544433 12 344
Q ss_pred HHHHHHHHHHH
Q psy11785 212 AWIAITAVLYA 222 (308)
Q Consensus 212 ~~~~~~~~~~~ 222 (308)
.++.+.+.++.
T Consensus 166 g~G~~~m~lgs 176 (735)
T KOG3626|consen 166 GIGLVLMGLGS 176 (735)
T ss_pred eechhHHHHHH
Confidence 44444444443
No 270
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=54.07 E-value=51 Score=33.20 Aligned_cols=67 Identities=12% Similarity=0.126 Sum_probs=37.1
Q ss_pred cChHHHHHHHHHHHHH----HHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785 137 KNDILMYRTASSVLHI----LPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 137 ~n~~f~~~~l~~~~~~----~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~ 206 (308)
++|.++....+..+.. +.+.....-+| ++...+|-+.. ..++.....+ +..++..+.|+++|.||||
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~-~I~~diG~~~~-~~w~~~~~~l-~~av~~~~~G~LSDlfGRr 108 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILP-YINADIGGSDN-WSWFSTAWTL-ASAVSFPFVGRLSDLFGRR 108 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHhcCCCcc-chHHHHHHHH-HHHHHHHhhHHHHHHhcch
Confidence 4566654443333322 22222233344 45556676543 4455444444 4566678889999999976
No 271
>KOG2532|consensus
Probab=53.92 E-value=25 Score=34.22 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=45.8
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11785 19 ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFP 94 (308)
Q Consensus 19 ~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p 94 (308)
.|++.+..+|+.+....+...++|.+-|.+.+ - + . ...|+..|++.+++.++..+.+.++-
T Consensus 387 apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~------------~-t-~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 387 APQHAGFVMGIINFVGALAGFIAPLLVGIIVT-D------------N-T-REEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C------------C-C-HHHHHHHHHHHHHHHHHhchheeEee
Confidence 57777888888888888888888888887763 1 1 1 13588999999988887776665554
No 272
>PRK10263 DNA translocase FtsK; Provisional
Probab=53.68 E-value=3.5e+02 Score=30.14 Aligned_cols=19 Identities=21% Similarity=0.111 Sum_probs=12.9
Q ss_pred hhHHHhhhhheehhhccCC
Q psy11785 188 VMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 188 ~~~iG~~lgG~l~~r~~~~ 206 (308)
|+++|.+++..+..-+|.-
T Consensus 143 GGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred cchHHHHHHHHHHHHHhHH
Confidence 5567777777777777643
No 273
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=50.16 E-value=17 Score=27.36 Aligned_cols=19 Identities=26% Similarity=0.132 Sum_probs=15.1
Q ss_pred hhHHHhhhhheehhhccCC
Q psy11785 188 VMGIGIILSGVFILKFKPN 206 (308)
Q Consensus 188 ~~~iG~~lgG~l~~r~~~~ 206 (308)
+.+++.++.|++.||+++|
T Consensus 10 ~~~~~~~~~g~~~d~~g~~ 28 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRK 28 (141)
T ss_pred HHHHHHhhHHHHHhhcchh
Confidence 4567788889999999865
No 274
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=48.12 E-value=3e+02 Score=27.51 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=24.1
Q ss_pred CccCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy11785 16 DNVANRESPLYFAITIGVRILGPSLGFILGSF 47 (308)
Q Consensus 16 d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ 47 (308)
|.+|.+++-..-=-+.+....||.+||+++..
T Consensus 48 DYVPtnk~vlfGhHFaaIAGAGPivGPvlAAq 79 (575)
T COG1966 48 DYVPTNKWVLFGHHFASIAGAGPIVGPALAAQ 79 (575)
T ss_pred ccccCCchhhhHHHHHHHhccCcchhHHHHHH
Confidence 67777665555445667788999999999875
No 275
>COG3350 Uncharacterized conserved protein [Function unknown]
Probab=48.11 E-value=8.6 Score=25.27 Aligned_cols=8 Identities=38% Similarity=1.115 Sum_probs=6.1
Q ss_pred CcceeeCC
Q psy11785 266 KFNPICGG 273 (308)
Q Consensus 266 ~~~PvC~~ 273 (308)
.-+||||.
T Consensus 3 ~iDPVcgm 10 (53)
T COG3350 3 VIDPVCGM 10 (53)
T ss_pred cccCCcCc
Confidence 45799985
No 276
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=46.28 E-value=29 Score=22.32 Aligned_cols=34 Identities=21% Similarity=-0.025 Sum_probs=20.6
Q ss_pred hHHHhhhhheehhhccCCccchhHHHHHHHHHHHH
Q psy11785 189 MGIGIILSGVFILKFKPNARFVAAWIAITAVLYAL 223 (308)
Q Consensus 189 ~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~ 223 (308)
.++|+++||++.+.++. ...-....++.++++.+
T Consensus 4 GiiGa~vGg~l~~~lg~-~~~~~~~~~i~aviGAi 37 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI-NGGGSWGSFIVAVIGAI 37 (48)
T ss_pred ehHHHHHHHHHHHHhcc-cCCchHHHHHHHHHHHH
Confidence 36788899999888887 22222233444555544
No 277
>KOG3776|consensus
Probab=45.55 E-value=12 Score=36.66 Aligned_cols=31 Identities=29% Similarity=0.555 Sum_probs=25.2
Q ss_pred cCCCCCCCccCCCCCcceeeCCCCceecCccccccc
Q psy11785 252 PMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQ 287 (308)
Q Consensus 252 ~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~ 287 (308)
.++| . |-|.... |=|-.+|+...|+|++||.
T Consensus 315 ~~~~-~--Cy~~~~~--~~Clp~G~~niS~C~~~~p 345 (507)
T KOG3776|consen 315 NPDG-F--CYCTEKK--PNCLPSGVLNISQCQGGAP 345 (507)
T ss_pred CCCc-c--ccCcccc--CCCCccCceeehhhcCCCc
Confidence 3455 3 9997554 5599999999999999998
No 278
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=45.27 E-value=1.2e+02 Score=24.58 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
++.++..-.+.....|.-..+++.+|.- .+...|+.++|.++.|++.+|.+.
T Consensus 37 iaaVlLGP~ya~~~Af~~sliR~~lg~G--------t~lAfPGsm~GA~laGllyr~~~k 88 (150)
T PF09512_consen 37 IAAVLLGPWYAVAMAFITSLIRNLLGTG--------TLLAFPGSMFGALLAGLLYRKTKK 88 (150)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHhCCC--------CHHHhccchHHHHHHHHHHHHhCc
Confidence 3333333333344455566666665532 123478999999999999999863
No 279
>KOG0254|consensus
Probab=44.49 E-value=37 Score=33.14 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=27.9
Q ss_pred cccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHH
Q psy11785 178 NMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYA 222 (308)
Q Consensus 178 gl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~ 222 (308)
+++.+... .+..+|.++.|++.|++|+| ..+.++.+...++.
T Consensus 92 s~~~s~~~-lga~~g~l~~g~l~d~~GRk--~~l~~~~~~~~iG~ 133 (513)
T KOG0254|consen 92 GLLTSILN-LGALVGSLLAGRLGDRIGRK--KTLLLAVVLFLIGA 133 (513)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHH
Confidence 56555444 46688999999999999965 44444444444443
No 280
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=44.13 E-value=27 Score=32.64 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=28.6
Q ss_pred HHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHH
Q psy11785 168 TQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIA 215 (308)
Q Consensus 168 ~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~ 215 (308)
+++|++..+.+.++..-..-+++.|. +.|.+.||+|+| +.++.+++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk-~~cl~~ci 107 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRK-KACLLFCI 107 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCch-HHHHHHHH
Confidence 47999999988765322222334454 557899999955 33443333
No 281
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=41.52 E-value=29 Score=25.51 Aligned_cols=44 Identities=23% Similarity=0.192 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhh
Q psy11785 142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGG 185 (308)
Q Consensus 142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~ 185 (308)
+...+.....+.++.....+.|..+.....-.+...|++.|...
T Consensus 19 ~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~ 62 (91)
T PF04341_consen 19 WPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQ 62 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHH
Confidence 34444455566677777888888876543322444555555433
No 282
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=40.43 E-value=23 Score=32.17 Aligned_cols=48 Identities=8% Similarity=0.024 Sum_probs=35.6
Q ss_pred ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
+.++.+|...+...+.++++ .+.+.++. .+..+|.+++|.+-|.+.+.
T Consensus 243 ~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 243 FNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 45678888888888877654 44555664 56778999999988888764
No 283
>KOG4260|consensus
Probab=38.93 E-value=15 Score=32.77 Aligned_cols=30 Identities=40% Similarity=1.078 Sum_probs=25.2
Q ss_pred ccCCCCCcceeeCCCCceec-----------Cccccccccc
Q psy11785 260 CECDHSKFNPICGGDGRTYF-----------SACHAGCQNI 289 (308)
Q Consensus 260 C~C~~~~~~PvC~~~g~ty~-----------SpC~AGC~~~ 289 (308)
|.|+...=.|.|..=|+.|| +.||+||..+
T Consensus 170 CkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~ 210 (350)
T KOG4260|consen 170 CKCETGYTGPLCRYCGIEYFESSRNEQHLVCTACHEGCLGV 210 (350)
T ss_pred ccccCCCCCccccccchHHHHhhcccccchhhhhhhhhhcc
Confidence 89987766799988889999 5899999853
No 284
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=38.60 E-value=22 Score=36.26 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=37.2
Q ss_pred HHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785 154 PIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK 204 (308)
Q Consensus 154 ~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~ 204 (308)
.+||+.+.+-.|+.+.+|++..++..+.+..... .-+-.++||++.|++=
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l-~yl~pilGg~iAD~~l 51 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYL-CYLTPLIGAIIADGWL 51 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 3577788888999999999998887766554332 3445678999999853
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.58 E-value=39 Score=25.84 Aligned_cols=21 Identities=19% Similarity=0.196 Sum_probs=11.1
Q ss_pred HHHhhhhheehhhc-cCCccchh
Q psy11785 190 GIGIILSGVFILKF-KPNARFVA 211 (308)
Q Consensus 190 ~iG~~lgG~l~~r~-~~~~~~~~ 211 (308)
++|..+ ||+.||| +-++..++
T Consensus 57 lVGa~i-G~llD~~agTsPwglI 78 (116)
T COG5336 57 LVGAGI-GWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHH-HHHHHHhcCCCcHHHH
Confidence 444433 6888886 33443433
No 286
>KOG4096|consensus
Probab=36.93 E-value=14 Score=25.93 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=28.2
Q ss_pred ccccccchhhhhhhhHHHhhhhheehhhccCCccchhHH
Q psy11785 175 HTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAW 213 (308)
Q Consensus 175 ~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~ 213 (308)
-.+|++++.. .++..|.++||+-.-|.+++.+..++.
T Consensus 11 ikmG~~mG~a--vG~a~G~lfGgf~~lR~g~~g~~~vr~ 47 (75)
T KOG4096|consen 11 IKMGLMMGGA--VGGATGALFGGFAALRYGPRGRGLVRT 47 (75)
T ss_pred HHHHHHHHhh--hhhhhhhhccchhheeecCChhHHHHH
Confidence 3456666643 467889999999999999998876654
No 287
>PRK03612 spermidine synthase; Provisional
Probab=36.90 E-value=77 Score=31.32 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=30.4
Q ss_pred cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
.|+...+..+. ..++.+...|-+++...+|.++|.++.++++-
T Consensus 128 ~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 128 IPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 44444444332 22345677899999999999999999998764
No 288
>COG4890 Predicted outer membrane lipoprotein [Function unknown]
Probab=36.80 E-value=81 Score=18.70 Aligned_cols=22 Identities=41% Similarity=0.794 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q psy11785 68 WIGAWWLGLVLVAVFLMLAAVA 89 (308)
Q Consensus 68 W~gaWw~~fii~g~~~ll~~i~ 89 (308)
|-.+|-+|.++..+.+++-++.
T Consensus 2 WYFaWiLG~lLAcAFgiinAlw 23 (37)
T COG4890 2 WYFAWILGLLLACAFGIINALW 23 (37)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 5567888887777766666543
No 289
>KOG0255|consensus
Probab=34.72 E-value=64 Score=31.36 Aligned_cols=41 Identities=10% Similarity=0.025 Sum_probs=35.5
Q ss_pred chhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 10 GIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 10 g~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
...+..|.+|...|..+.+...+...+|.+++|.+-.....
T Consensus 427 ~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 427 IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 36677899999999999999999999999999998766554
No 290
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=34.37 E-value=1.9e+02 Score=27.83 Aligned_cols=77 Identities=13% Similarity=-0.020 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHH
Q psy11785 144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYAL 223 (308)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~ 223 (308)
+.++.++....--.+....|.|+.+.|.-+---.+.+--...+..+++|..+ |..+||..+ .+.++..++..-++.+
T Consensus 7 Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~v-G~~iD~~~R--l~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 7 LYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWV-GRWIDRSPR--LKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHH-HHHHhCCcc--hhhHHHHHHHHHHHHH
Confidence 3345555555555566677888888765433322222111122233455544 455677642 3455555555444443
No 291
>KOG4332|consensus
Probab=34.16 E-value=3.8e+02 Score=24.68 Aligned_cols=89 Identities=9% Similarity=0.109 Sum_probs=45.4
Q ss_pred HHHHhhcChH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccccc----ccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 131 AVKRLLKNDI-LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTAN----MVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 131 ~~~~Ll~n~~-f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~ag----l~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
+.+.+.++.. .+...+-..++...+.-.+.|.|. +||..-+ +++...++ +.++|+-+..++..|-.+
T Consensus 240 aa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPa-------Lspn~e~iPhGfiFatFMl-ASmLGSSla~Rl~s~s~~ 311 (454)
T KOG4332|consen 240 AARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA-------LSPNDEEIPHGFIFATFML-ASMLGSSLASRLLSRSSP 311 (454)
T ss_pred hHHHHhcchHHHHHHHHHHHHhhhhheeeeeeccc-------CCCCcccCCchhHHHHHHH-HHHHhhHHHHHHHhcCCc
Confidence 3445555443 344445455555555445556664 3443333 33322221 234455555555555555
Q ss_pred CccchhHHHHHHHHHHHHHHhH
Q psy11785 206 NARFVAAWIAITAVLYALGMGI 227 (308)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
+....+.+.+.+++.++.+.+.
T Consensus 312 ~ve~ymqivf~vs~a~l~Lpil 333 (454)
T KOG4332|consen 312 KVESYMQIVFLVSIAALLLPIL 333 (454)
T ss_pred ccchHHHHHHHHHHHHHHHHHH
Confidence 6666677777766666555443
No 292
>KOG2325|consensus
Probab=31.68 E-value=18 Score=35.30 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=34.5
Q ss_pred hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785 11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY 52 (308)
Q Consensus 11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~ 52 (308)
.+.-.+...|++.+.+.|++.....++..+||++....-..+
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 345566778899999999999999999999999988776554
No 293
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=31.08 E-value=5.2e+02 Score=25.51 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=9.6
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q psy11785 138 NDILMYRTASSVLHILPIA 156 (308)
Q Consensus 138 n~~f~~~~l~~~~~~~~~~ 156 (308)
++.++...++..+....+.
T Consensus 260 ~~~lls~lvG~G~Qll~~~ 278 (521)
T PF02990_consen 260 HPMLLSALVGTGIQLLFMA 278 (521)
T ss_pred CchHHHhHhcchhhhhHHH
Confidence 4455555555555444433
No 294
>TIGR02359 thiW thiW protein. Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved,to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=30.89 E-value=3e+02 Score=22.59 Aligned_cols=39 Identities=15% Similarity=-0.052 Sum_probs=24.0
Q ss_pred hhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHH
Q psy11785 186 ILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALG 224 (308)
Q Consensus 186 i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~ 224 (308)
.|+.+++.++.|++.+|.+.+......-.+...+++.+.
T Consensus 72 fpg~~~~a~laGliyrk~~~~~~a~~ge~igt~iig~~~ 110 (160)
T TIGR02359 72 FPGGMPGALLAGLLYRFGRKHYWASLGEILGTGIIGSLL 110 (160)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
Confidence 567778888999998886544333444444445554443
No 295
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=29.18 E-value=3.4e+02 Score=22.69 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=21.8
Q ss_pred hhhhcCccCCCCchhH--HHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785 11 IPYIDDNVANRESPLY--FAITIGVRILGPSLGFILGSFCTRL 51 (308)
Q Consensus 11 ~a~i~d~~~~~~~~~~--~gi~~~~~~~Gp~lG~~lGg~ll~~ 51 (308)
.+.+.+..|+++|.++ .|+..+ .+=-.+--.++.++++.
T Consensus 18 i~~~~~~lp~~~r~kal~~Gi~~A--~~lR~~~i~~~~~ll~~ 58 (183)
T PF03741_consen 18 IAMIFRKLPPEQRRKALFWGIIGA--IVLRIIFIFLASWLLSI 58 (183)
T ss_pred HHHHHhCCCHHHhhhhHHHhHHHH--HHHHHHHHHHHHHHHHH
Confidence 4566777888766554 444433 23344444566666653
No 296
>KOG2563|consensus
Probab=29.05 E-value=66 Score=31.23 Aligned_cols=54 Identities=11% Similarity=-0.042 Sum_probs=27.4
Q ss_pred HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785 164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY 221 (308)
Q Consensus 164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~ 221 (308)
.|.+.-|| +.+.+-++..+..+. .+.-.+.+-|+.||+|+| ....+..+...++
T Consensus 69 n~~~~~Yg-s~~~~~wlsmIym~v-~vp~gf~~mw~ldk~GLR--~a~llgt~ln~iG 122 (480)
T KOG2563|consen 69 NYVNSFYG-SSSAADWLSMIYMVV-SVPFGFAAMWILDKFGLR--TALLLGTVLNGIG 122 (480)
T ss_pred HHHHHHhc-chHHHHHHHHHHHHH-HHHHhhHHHHhhcccchH--HHHHHHHHHHHHH
Confidence 36677777 433333322222222 222234567999999987 3444444444443
No 297
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=28.57 E-value=5.5e+02 Score=24.90 Aligned_cols=29 Identities=7% Similarity=-0.146 Sum_probs=17.8
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785 18 VANRESPLYFAITIGVRILGPSLGFILGS 46 (308)
Q Consensus 18 ~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg 46 (308)
+.+.+..-.++++.++.+.|-..=|+..|
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g 45 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAG 45 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHh
Confidence 34555566666776666666666666554
No 298
>COG4720 Predicted membrane protein [Function unknown]
Probab=28.10 E-value=97 Score=25.88 Aligned_cols=51 Identities=22% Similarity=0.464 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785 26 YFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA 86 (308)
Q Consensus 26 ~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~ 86 (308)
+..++.++..+||..|.+.|+.=...+ | +....|.| ||..++.-|..+++.
T Consensus 41 da~i~las~lfGs~~G~lvg~iG~al~-D------ll~gy~~W---~~~tlv~~G~~g~i~ 91 (177)
T COG4720 41 DAGIALASFLFGSRAGALVGGLGHALK-D------LLSGYPSW---MFFTLVIHGLIGLIA 91 (177)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHH-H------HhcCCccH---HHHHHHHhchhhhhh
Confidence 345666777889988888877644432 2 12234567 566666656665544
No 299
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=28.04 E-value=2.4e+02 Score=24.61 Aligned_cols=10 Identities=20% Similarity=1.365 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q psy11785 72 WWLGLVLVAVF 82 (308)
Q Consensus 72 Ww~~fii~g~~ 82 (308)
||. +++.|++
T Consensus 52 ~~~-~~i~gi~ 61 (224)
T PF13829_consen 52 WWY-WLIIGIL 61 (224)
T ss_pred HHH-HHHHHHH
Confidence 444 4455544
No 300
>PF01130 CD36: CD36 family; InterPro: IPR002159 CD36 is a transmembrane, highly glycosylated, 88kDa glycoprotein expressed by monocytes, macrophages, platelets, microvascular endothelial cells and adipose tissues. Platelet glycoprotein IV (GP IV)(GPIIIb) (CD36 antigen) is also called GPIV, OKM5-antigen or PASIV. CD36 recognises oxidized low density lipoprotein, long chain fatty acids, anionic phospholipids, collagen types I, IV and V, thrombospondin (TSP) and Plasmodium falciparum infected erythrocytes. The recognition of apoptotic neutrophils is in co-operation with TSP and avb3. Other ligands may still be unknown. CD36 is a scavenger receptor for oxidized LDL and shed photoreceptor outer segments and in recognition and phagocytosis of apoptotic cells and is the cell adhesion molecule in platelet adhesion and aggregation, platelet-monocyte and platelet-tumor cell interaction []. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0007155 cell adhesion, 0016020 membrane
Probab=27.29 E-value=46 Score=32.28 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=29.7
Q ss_pred cCCCCCCCccCCCCCcceeeCCCCceecCccccccc
Q psy11785 252 PMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQ 287 (308)
Q Consensus 252 ~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~ 287 (308)
..+|.+..|-|++......|..+|+.-.|+|+.|-.
T Consensus 306 ~~~~~~n~c~C~~~~~~~~c~p~G~~~ls~C~~g~P 341 (467)
T PF01130_consen 306 GSNNPENKCFCPKNSDECNCLPSGLLNLSPCQFGAP 341 (467)
T ss_pred cCcCccccccCCCCCcccccCCcceEechhhcCCCC
Confidence 456666669999887777899999999999998865
No 301
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.96 E-value=2e+02 Score=19.19 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785 27 FAITIGVRILGPSLGFILGSFCTR 50 (308)
Q Consensus 27 ~gi~~~~~~~Gp~lG~~lGg~ll~ 50 (308)
+-.+..+..+|-++|++.+...-.
T Consensus 4 ivt~fWs~il~~vvgyI~ssL~~~ 27 (57)
T PF11151_consen 4 IVTFFWSFILGEVVGYIGSSLTGV 27 (57)
T ss_pred EehhHHHHHHHHHHHHHHHHHhCC
Confidence 334455667888899888876543
No 302
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=26.85 E-value=3.1e+02 Score=21.39 Aligned_cols=30 Identities=13% Similarity=-0.137 Sum_probs=19.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785 20 NRESPLYFAITIGVRILGPSLGFILGSFCT 49 (308)
Q Consensus 20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll 49 (308)
.--||.-..=+.....+|.++|.++|-.+.
T Consensus 16 vV~rGlT~~El~~~a~~~~~~g~~~gl~la 45 (121)
T PF11990_consen 16 VVFRGLTADELGLAAGVGFVAGLVVGLPLA 45 (121)
T ss_pred CeecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566666566667777788777666543
No 303
>KOG2816|consensus
Probab=26.62 E-value=44 Score=32.50 Aligned_cols=52 Identities=19% Similarity=0.103 Sum_probs=44.4
Q ss_pred cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy11785 3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVD 54 (308)
Q Consensus 3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~ 54 (308)
+...+|...+++.-++.++++|+.++++.....+.+.++|.+=+.+.....|
T Consensus 344 ~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 344 AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3456778889999999999999999999999999999999988887665443
No 304
>PRK03612 spermidine synthase; Provisional
Probab=26.38 E-value=1.9e+02 Score=28.65 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheeh
Q psy11785 150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFI 200 (308)
Q Consensus 150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~ 200 (308)
+..++..++-......+...+|-+..+.+++++.. +.++.+|..+++++.
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~f-l~glalGs~l~~~~~ 74 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLM-LFAMGVGALLSKYLL 74 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH-HHHHHHHHHHHHhhh
Confidence 34455556666677777778888888877766543 345666666666554
No 305
>PF14927 Neurensin: Neurensin
Probab=25.39 E-value=1.9e+02 Score=23.24 Aligned_cols=30 Identities=27% Similarity=0.593 Sum_probs=17.0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785 61 ITPSDPRWIGAWWLGLVLVAVFLMLAAVAM 90 (308)
Q Consensus 61 ~~~~~~~W~gaWw~~fii~g~~~ll~~i~~ 90 (308)
..+.+.+|-..||-.-+++|.+.++..+..
T Consensus 32 ~~~~~~~w~s~~wkV~~i~g~l~Ll~Gi~~ 61 (140)
T PF14927_consen 32 IQPSPSRWSSVCWKVGFISGLLLLLLGIVA 61 (140)
T ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 455666786656644455565555555443
No 306
>PF09490 CbtA: Probable cobalt transporter subunit (CbtA)
Probab=23.99 E-value=3.9e+02 Score=23.34 Aligned_cols=65 Identities=17% Similarity=0.249 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy11785 25 LYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKA 100 (308)
Q Consensus 25 ~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~~ 100 (308)
|....+......|.++| ++...+...+. ...+.+++..+.+|.. +....+..+|++.+|-+.|..
T Consensus 70 R~~~~~~~~~l~g~a~g-l~~~~~~~~~g------r~~~~~~~~~al~la~----~GF~av~lvP~LkyPpnpPav 134 (227)
T PF09490_consen 70 RTGQTLLGNVLFGIAFG-LFALAFAFLRG------RLGPLSPRRLALLLAA----AGFVAVFLVPFLKYPPNPPAV 134 (227)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhc------ccCCCChHHHHHHHHH----HHHHHHHHHHcccCCCCCCCC
Confidence 44444555666678888 66655543321 1123344544433321 222334456777777776653
No 307
>COG5249 RER1 Golgi protein involved in Golgi-to-ER retrieval [Intracellular trafficking and secretion]
Probab=22.52 E-value=3.9e+02 Score=21.63 Aligned_cols=28 Identities=29% Similarity=0.596 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q psy11785 70 GAWWLGLVLVAVFLMLAAVAMFMFPKTLT 98 (308)
Q Consensus 70 gaWw~~fii~g~~~ll~~i~~~~~p~~~p 98 (308)
|+|.+.-.-.|+- ++-+++.++-|+-.+
T Consensus 55 ~gwY~icY~Lgiy-LLn~flaFLTPKfdm 82 (180)
T COG5249 55 GGWYLICYCLGIY-LLNAFLAFLTPKFDM 82 (180)
T ss_pred cchhhHHHHHHHH-HHHHHHHHhCCCCcc
Confidence 5677655544443 334455556666443
No 308
>KOG4004|consensus
Probab=22.34 E-value=29 Score=29.53 Aligned_cols=20 Identities=25% Similarity=0.665 Sum_probs=17.3
Q ss_pred CCcceeeCCCCceecCcccc
Q psy11785 265 SKFNPICGGDGRTYFSACHA 284 (308)
Q Consensus 265 ~~~~PvC~~~g~ty~SpC~A 284 (308)
..+.-||+.|+.||=|=|+-
T Consensus 87 ~p~~KVC~nnNqTf~S~C~~ 106 (259)
T KOG4004|consen 87 RPVHKVCGNNNQTFNSWCEM 106 (259)
T ss_pred CchhhhhcCCCcchhHHHHH
Confidence 46778899999999999973
No 309
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=21.23 E-value=3.8e+02 Score=20.44 Aligned_cols=42 Identities=21% Similarity=0.304 Sum_probs=24.4
Q ss_pred HHHHHhhcChHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHhC
Q psy11785 130 KAVKRLLKNDILMYRTASSVLH-ILPIAGLYTFLPKYFETQFR 171 (308)
Q Consensus 130 ~~~~~Ll~n~~f~~~~l~~~~~-~~~~~~~~~~~P~yl~~~~g 171 (308)
+..|+.+++..|..=+...... .+++.....++..++.++..
T Consensus 39 ~~lrr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L~ 81 (106)
T PF11872_consen 39 RFLRRLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQLA 81 (106)
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777776665555544433 34444455577777777654
No 310
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=21.12 E-value=1.3e+02 Score=23.17 Aligned_cols=25 Identities=16% Similarity=0.012 Sum_probs=17.1
Q ss_pred chHHHHHhhcChHHHHHHHHHHHHH
Q psy11785 128 FPKAVKRLLKNDILMYRTASSVLHI 152 (308)
Q Consensus 128 ~~~~~~~Ll~n~~f~~~~l~~~~~~ 152 (308)
.....+.+++||.|+...+...+.+
T Consensus 31 ~~~~~~~Ll~n~~y~ipf~lNq~GS 55 (113)
T PF10639_consen 31 LLQEIKFLLLNPKYIIPFLLNQSGS 55 (113)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4566788999999986655444433
No 311
>cd01397 HAT_MBD Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The Drosophila melanogaster toutatis protein, a putative subunit of the chromatin-remodeling complex, and other such proteins in this group share a similar domain architecture with BAZ2A, as does the Caenorhabditis elegans flectin homolog.
Probab=20.99 E-value=42 Score=23.76 Aligned_cols=15 Identities=13% Similarity=0.461 Sum_probs=12.1
Q ss_pred CceecCccccccccc
Q psy11785 275 GRTYFSACHAGCQNI 289 (308)
Q Consensus 275 g~ty~SpC~AGC~~~ 289 (308)
.+.|+|||=.=+++.
T Consensus 26 dV~Y~aPcGKklRs~ 40 (73)
T cd01397 26 EVAYYAPCGKKLRQY 40 (73)
T ss_pred eEEEECCCCcccccH
Confidence 478999998887754
No 312
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=20.91 E-value=7.5e+02 Score=23.74 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=30.8
Q ss_pred HHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785 167 ETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP 205 (308)
Q Consensus 167 ~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~ 205 (308)
|-.-+++....++++|.....+.++-+++.-.++|+-++
T Consensus 364 qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~iV~d~~gl 402 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINTFVALVLQTILTLIVVDKRGL 402 (412)
T ss_pred HHHHhccccceeeeeeeHHHHHHHHHHheEEEEEcCccc
Confidence 344567788889999998888888888888888986443
No 313
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=20.89 E-value=2.4e+02 Score=24.95 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=22.6
Q ss_pred cchhhhcCccCCCCchhHHHHHHHHHHHHHHH
Q psy11785 9 LGIPYIDDNVANRESPLYFAITIGVRILGPSL 40 (308)
Q Consensus 9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~l 40 (308)
.....--+||| ++||.+.|+.-...+++.++
T Consensus 116 a~lvt~~~NFP-~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 116 ASLVTCVRNFP-RSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred HHHHHHHHhCc-cccCceehhhhHHHHhHHHH
Confidence 33334447886 58999999998888877655
No 314
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.24 E-value=1.2e+02 Score=22.95 Aligned_cols=14 Identities=7% Similarity=0.190 Sum_probs=6.1
Q ss_pred HHhhhhheehhhcc
Q psy11785 191 IGIILSGVFILKFK 204 (308)
Q Consensus 191 iG~~lgG~l~~r~~ 204 (308)
+|.++|-||-+|++
T Consensus 58 ~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 58 LGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHhhcC
Confidence 34444444444444
Done!