BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11786
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11498|PYC_HUMAN Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2
Length = 1178
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
+ +EEN+ RA + FG + VEK I +PRHIEVQILGD+YG+++HLY+RDC I
Sbjct: 211 EELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRR 270
Query: 97 -EKISESHPKS 106
+K+ E P +
Sbjct: 271 HQKVVEIAPAA 281
>sp|Q29RK2|PYC_BOVIN Pyruvate carboxylase, mitochondrial OS=Bos taurus GN=PC PE=2 SV=2
Length = 1178
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
+ +EEN+ RA + FG + VEK I +PRHIEVQILGD+YG+++HLY+RDC I
Sbjct: 211 EELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRR 270
Query: 97 -EKISESHPKS 106
+K+ E P +
Sbjct: 271 HQKVVEIAPAA 281
>sp|Q05920|PYC_MOUSE Pyruvate carboxylase, mitochondrial OS=Mus musculus GN=Pc PE=1 SV=1
Length = 1178
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
+ +EEN+ RA + FG + VEK I +PRHIEVQILGD+YG+++HLY+RDC I
Sbjct: 211 EELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRR 270
Query: 97 -EKISESHPKS 106
+K+ E P +
Sbjct: 271 HQKVVEIAPAT 281
>sp|P52873|PYC_RAT Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus GN=Pc PE=1
SV=2
Length = 1178
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
+ +EEN+ RA + FG + VEK I +PRHIEVQILGD+YG+++HLY+RDC I
Sbjct: 211 EELEENYTRAYSEALAAFGNGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRR 270
Query: 97 -EKISESHPKS 106
+K+ E P +
Sbjct: 271 HQKVVEIAPAT 281
>sp|O17732|PYC1_CAEEL Pyruvate carboxylase 1 OS=Caenorhabditis elegans GN=pyc-1 PE=1 SV=1
Length = 1175
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
+ +EE F+R+ + FG + VEK + RPRHIEVQ+LGD +G++VHLY+RDC +
Sbjct: 206 EEVEEAFRRSYSEAQAAFGDGSLFVEKFVERPRHIEVQLLGDHHGNIVHLYERDCSVQRR 265
Query: 97 -EKISESHP 104
+K+ E P
Sbjct: 266 HQKVVEIAP 274
>sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Glycine max GN=MCCA PE=1 SV=2
Length = 731
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
T D E+F A + FG + +L+EK I RPRHIEVQI GDK+G+V+HLY+RDC +
Sbjct: 204 TPDEFVESFLAAQREAAASFGVNTILLEKYITRPRHIEVQIFGDKHGNVLHLYERDCSVQ 263
Query: 96 A--EKISESHP 104
+KI E P
Sbjct: 264 RRHQKIIEEAP 274
>sp|Q2QMG2|MCCA_ORYSJ Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=MCCA PE=2 SV=2
Length = 737
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
FG + +LVEK I +PRHIEVQI GD++G+V+HLY+RDC + +KI E P
Sbjct: 229 FGINTLLVEKYITQPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAP 280
>sp|Q9KWU4|PYC_BACSU Pyruvate carboxylase OS=Bacillus subtilis (strain 168) GN=pyc PE=3
SV=1
Length = 1148
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
++ ++E ++RA + FG D++ VEK I P+HIEVQ++GDK G+VVHL++RDC +
Sbjct: 178 SESEVKEAYERAKSEAKAAFGNDEVYVEKLIENPKHIEVQVIGDKQGNVVHLFERDCSV 236
>sp|Q42523|MCCA_ARATH Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=MCCA PE=1 SV=2
Length = 734
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
FG + +L+EK I RPRHIEVQI GDK+G+V+HLY+RDC + +KI E P
Sbjct: 228 FGVNTILLEKYITRPRHIEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEEAP 279
>sp|P78992|PYC_PICPA Pyruvate carboxylase OS=Komagataella pastoris GN=PYC1 PE=3 SV=1
Length = 1189
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
D IE+ F RA + FG + +E+ + +P+HIEVQ+L D YG+V+HL++RDC +
Sbjct: 198 DDIEDAFLRASSEAKTAFGNGTVFIERFLDKPKHIEVQLLADNYGNVIHLFERDCSV 254
>sp|Q9HES8|PYC_ASPNG Pyruvate carboxylase OS=Aspergillus niger GN=pyc PE=3 SV=1
Length = 1192
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 40 IEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
+ ++F+RA + FG + VE+ + RP+HIEVQ+LGD +G+VVHL++RDC +
Sbjct: 219 LRDSFERATSEARSAFGNGTVFVERFLDRPKHIEVQLLGDNHGNVVHLFERDCSV 273
>sp|D3DJ42|2OCS_HYDTT 2-oxoglutarate carboxylase small subunit OS=Hydrogenobacter
thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
GN=cfiB PE=1 SV=1
Length = 472
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 43 NFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
N++ A + FG+ D+L+EK I P+HIE Q+LGDKYG+V+HL +RDC I
Sbjct: 179 NYENAYNEAVKAFGRGDLLLEKYIENPKHIEFQVLGDKYGNVIHLGERDCSI 230
>sp|O34544|ACCC2_BACSU Biotin carboxylase 2 OS=Bacillus subtilis (strain 168) GN=accC2
PE=3 SV=1
Length = 444
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 37 KDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA 96
K A E N KRA FFG M +EK I RHIEVQ+L D++G VHL++RDC +
Sbjct: 178 KKAYEGNKKRAAD----FFGDGSMYIEKVIEHARHIEVQLLADQHGHTVHLFERDCSVQR 233
Query: 97 --EKISESHP 104
+K+ E P
Sbjct: 234 RHQKVIEEAP 243
>sp|Q0CLK1|PYC_ASPTN Pyruvate carboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=pyc PE=3 SV=2
Length = 1193
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 40 IEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--E 97
+ ++F+RA + FG + VE+ + +P+HIEVQ+LGD +G+VVHL++RDC + +
Sbjct: 220 LRDSFERATSEARSAFGNGTVFVERFLDKPKHIEVQLLGDNHGNVVHLFERDCSVQRRHQ 279
Query: 98 KISESHP 104
K+ E P
Sbjct: 280 KVVEVAP 286
>sp|O93918|PYC_ASPTE Pyruvate carboxylase OS=Aspergillus terreus GN=pyc PE=2 SV=1
Length = 1193
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 40 IEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--E 97
+ ++F+RA + FG + VE+ + +P+HIEVQ+LGD +G+VVHL++RDC + +
Sbjct: 220 LRDSFERATSEARSAFGNGTVFVERFLDKPKHIEVQLLGDNHGNVVHLFERDCSVQRRHQ 279
Query: 98 KISESHP 104
K+ E P
Sbjct: 280 KVVEVAP 286
>sp|Q9KDS9|ACCC_BACHD Biotin carboxylase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=accC PE=3
SV=1
Length = 452
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 37 KDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA 96
+ A N KRA FFG M +EK + PRHIEVQI D +G VVHL++RDC I
Sbjct: 178 RKAFAGNQKRATS----FFGDGTMFLEKAVENPRHIEVQIAADHHGHVVHLWERDCSIQR 233
Query: 97 --EKISESHP 104
+K+ E P
Sbjct: 234 RHQKVVEEAP 243
>sp|Q9UUE1|PYC_SCHPO Pyruvate carboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pyr1 PE=3 SV=1
Length = 1185
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 42/59 (71%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
+ D ++E+F+RA + FG + +E+ + +P+HIE+Q++ DK G+V+HL++RDC +
Sbjct: 207 SADTLKESFERARSEALASFGDGTVFIERFLDKPKHIEIQLMADKAGNVIHLHERDCSV 265
>sp|Q8X1T3|PYC_PICAN Pyruvate carboxylase OS=Pichia angusta GN=PYC PE=3 SV=1
Length = 1175
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
++I + F+RA + FG +E+ + +P+HIEVQ+L D YG+V+HL++RDC +
Sbjct: 199 ESIADAFQRATSEAKTAFGNGTCFIERFLDKPKHIEVQLLADNYGNVIHLFERDCSV 255
>sp|P32327|PYC2_YEAST Pyruvate carboxylase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC2 PE=1 SV=2
Length = 1180
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
D + + F+RA + FG VE+ + +P+HIEVQ+L D +G+VVHL++RDC +
Sbjct: 196 DDVADAFQRATSEARTAFGNGTCFVERFLDKPKHIEVQLLADNHGNVVHLFERDCSVQRR 255
Query: 97 -EKISESHP 104
+K+ E P
Sbjct: 256 HQKVVEVAP 264
>sp|P11154|PYC1_YEAST Pyruvate carboxylase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC1 PE=1 SV=2
Length = 1178
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 38 DAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA- 96
D + + F+RA + FG VE+ + +P+HIEVQ+L D +G+VVHL++RDC +
Sbjct: 195 DDVADAFQRATSEARTAFGNGTCFVERFLDKPKHIEVQLLADNHGNVVHLFERDCSVQRR 254
Query: 97 -EKISESHP 104
+K+ E P
Sbjct: 255 HQKVVEVAP 263
>sp|O30019|PYCA_ARCFU Pyruvate carboxylase subunit A OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pycA PE=3 SV=1
Length = 506
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI- 94
+++ +EE F+++ +F + +EK + RPRHIEVQIL D++G+V+HL +R+C I
Sbjct: 172 SQEELEEAFRKSKKLGESYFKDSTVYLEKYLARPRHIEVQILADQHGNVIHLGERECSIQ 231
Query: 95 --YAEKISESHPKSLN 108
+ + I E+ +LN
Sbjct: 232 RRHQKLIEEAPSPALN 247
>sp|Q06862|ACCC_NOSS1 Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=accC PE=3 SV=1
Length = 447
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
FG + +EK I RPRHIE QIL D YG+V+HL +RDC I +K+ E P
Sbjct: 193 FGNAGVYIEKFIERPRHIEFQILADNYGNVIHLGERDCSIQRRNQKLLEEAP 244
>sp|P0A508|BCCA_MYCTU Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium tuberculosis GN=accA1 PE=1 SV=1
Length = 654
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
FG D + +E+ + RPRHIEVQ+L D +G+VVHL +R+C + +K+ E P L
Sbjct: 192 FGDDTLFLERFVLRPRHIEVQVLADAHGNVVHLGERECSLQRRHQKVIEEAPSPL 246
>sp|P0A509|BCCA_MYCBO Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=accA1 PE=3 SV=1
Length = 654
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
FG D + +E+ + RPRHIEVQ+L D +G+VVHL +R+C + +K+ E P L
Sbjct: 192 FGDDTLFLERFVLRPRHIEVQVLADAHGNVVHLGERECSLQRRHQKVIEEAPSPL 246
>sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Homo sapiens GN=MCCC1 PE=1 SV=3
Length = 725
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
++ +E + A + F D ML+EK + PRH+EVQ+ GD +G+ V+L++RDC +
Sbjct: 220 SEQEFQEQLESARREAKKSFNDDAMLIEKFVDTPRHVEVQVFGDHHGNAVYLFERDCSVQ 279
Query: 96 A--EKISESHP 104
+KI E P
Sbjct: 280 RRHQKIIEEAP 290
>sp|Q58626|PYCA_METJA Pyruvate carboxylase subunit A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pycA PE=1 SV=1
Length = 501
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
FG + +EK + PRHIE+Q+LGDK+G+++HL DR+C I
Sbjct: 192 FGDPTVFIEKYLENPRHIEIQLLGDKHGNIIHLGDRECSI 231
>sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo
sapiens GN=PCCA PE=1 SV=4
Length = 728
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
+ F+ + + FG D +L+EK I PRHIE+Q+LGDK+G+ + L +R+C I +K+
Sbjct: 240 DGFRLSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKV 299
Query: 100 SESHP 104
E P
Sbjct: 300 VEEAP 304
>sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1
Length = 715
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
F D ML+EK + PRH+EVQ+ GD +G+ V+L++RDC + +KI E P
Sbjct: 235 FNDDAMLIEKFVDTPRHVEVQVFGDHHGNAVYLFERDCSVQRRHQKIIEEAP 286
>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus
musculus GN=Mccc1 PE=2 SV=2
Length = 717
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
F D ML+EK + PRH+EVQ+ GD +G+ V+L++RDC + +KI E P
Sbjct: 235 FNDDAMLIEKFVDTPRHVEVQVFGDHHGNAVYLFERDCSVQRRHQKIIEEAP 286
>sp|Q91ZA3|PCCA_MOUSE Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Mus
musculus GN=Pcca PE=2 SV=2
Length = 724
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
+ F+ + + FG D +L+EK I PRHIE+Q+LGDK+G+ + L +R+C I +K+
Sbjct: 236 DGFRFSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKV 295
Query: 100 SESHP 104
E P
Sbjct: 296 VEEAP 300
>sp|B9N843|ACCC2_POPTR Biotin carboxylase 2, chloroplastic OS=Populus trichocarpa
GN=POPTRDRAFT_673504 PE=2 SV=1
Length = 526
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 44 FKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
++A + FG D + +EK + PRHIE Q+L DK+G+VVH +RDC I
Sbjct: 246 LQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKFGNVVHFGERDCSI 296
>sp|B9HBA8|ACCC1_POPTR Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa
GN=POPTRDRAFT_831870 PE=2 SV=1
Length = 528
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 44 FKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
++A + FG D + +EK + PRHIE Q+L DK+G+VVH +RDC I
Sbjct: 244 LQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKFGNVVHFGERDCSI 294
>sp|P14882|PCCA_RAT Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus
norvegicus GN=Pcca PE=1 SV=3
Length = 737
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
+ F+ + + FG D +L+EK I PRHIE+Q+LGDK+G+ + L +R+C I +K+
Sbjct: 249 DGFRFSSQEAASSFGDDRLLIEKFIDNPRHIEIQVLGDKHGNALWLNERECSIQRRNQKV 308
Query: 100 SESHP 104
E P
Sbjct: 309 VEEAP 313
>sp|Q612F5|PCCA_CAEBR Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis briggsae GN=pcca-1 PE=3 SV=1
Length = 738
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
E ++ + + FG D MLVEK I PRHIE+QIL DK+G+ + L +R+C I +K+
Sbjct: 240 EGYRLSKQEAASSFGDDRMLVEKFIDNPRHIEMQILCDKHGNALWLNERECSIQRRNQKV 299
Query: 100 SESHPKSL 107
E P S
Sbjct: 300 IEEAPSSF 307
>sp|Q54KE6|MCCA_DICDI Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=mccA PE=3 SV=1
Length = 699
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 37 KDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA 96
+D +E + + A FG +LVEK + PRH+E+Q+ D++G+ VHL++RDC +
Sbjct: 206 EDGVESSKREATAS----FGDSRVLVEKYLVHPRHVEIQVFADRHGNCVHLFERDCSVQR 261
Query: 97 --EKISESHP 104
+KI E P
Sbjct: 262 RHQKIIEEAP 271
>sp|O04983|ACCC_ARATH Biotin carboxylase, chloroplastic OS=Arabidopsis thaliana GN=CAC2
PE=1 SV=1
Length = 537
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 44 FKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPI 94
++A + FG D +EK + PRHIE Q+L DK+G+VVH +RDC I
Sbjct: 253 LQQAKSEAAAAFGNDGCYLEKFVQNPRHIEFQVLADKFGNVVHFGERDCSI 303
>sp|Q19842|PCCA_CAEEL Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis elegans GN=pcca-1 PE=1 SV=1
Length = 724
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
E ++ + + FG D MLVEK I PRHIE+Q+L DK+G+ + L +R+C I +K+
Sbjct: 226 EGYRLSKQEAASSFGDDRMLVEKFIDNPRHIEMQVLCDKHGNALWLNERECSIQRRNQKV 285
Query: 100 SESHPKSL 107
E P S
Sbjct: 286 IEEAPSSF 293
>sp|O27939|PYCA_METTH Pyruvate carboxylase subunit A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pycA PE=1 SV=1
Length = 491
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
FG + +EK + RPRHIE Q++ D+ G+V+HL DR+C I +K+ E P +
Sbjct: 192 FGDPTVYIEKYLERPRHIEFQVMADESGNVIHLADRECSIQRRHQKLIEEAPSPI 246
>sp|P43873|ACCC_HAEIN Biotin carboxylase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=accC PE=3 SV=1
Length = 448
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
++DA+EE+ + F D + +EK + PRH+E+Q+L D +G+ V+L +RDC +
Sbjct: 174 SEDALEESIAMTKAEAKAAFNNDMVYMEKYLENPRHVEIQVLADTHGNAVYLAERDCSMQ 233
Query: 96 A--EKISESHP 104
+K+ E P
Sbjct: 234 RRHQKVVEEAP 244
>sp|P49787|ACCC1_BACSU Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) GN=accC1
PE=3 SV=3
Length = 450
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
FG + +EK I RH+E+Q+L D YG+ +HL +RDC I +K+ E P
Sbjct: 192 FGNPGVYIEKYIEDFRHVEIQVLADNYGNTIHLGERDCSIQRRLQKLLEESP 243
>sp|P37798|ACCC_PSEAE Biotin carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=accC PE=1 SV=1
Length = 449
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
FG + +EK + PRH+EVQ+L D G+ +HL DRDC + +K+ E P
Sbjct: 193 FGNPMVYLEKFLTNPRHVEVQVLSDGQGNAIHLGDRDCSLQRRHQKVIEEAP 244
>sp|O52058|ACCC_ALLVD Biotin carboxylase OS=Allochromatium vinosum (strain ATCC 17899 /
DSM 180 / NBRC 103801 / D) GN=accC PE=3 SV=2
Length = 449
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
F D + +EK + PRHIE Q+L D+ G+ +HL +RDC + +K+ E P
Sbjct: 196 FNNDMVYMEKYLENPRHIEFQVLADQMGNAIHLGERDCSMQRRHQKVVEEAP 247
>sp|P46392|BCCA_MYCLE Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium leprae (strain TN) GN=bccA PE=3 SV=2
Length = 598
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
T + I E ++ A + + FG+ + VE+ + +PRH+E Q++ D++G++V RDC +
Sbjct: 180 TLEEISELYESAVREATVAFGRGECFVERYLDKPRHVEAQVIADQHGNIVVAGTRDCSLQ 239
Query: 96 A--EKISESHP 104
+K+ E P
Sbjct: 240 RRFQKLVEEAP 250
>sp|P32528|DUR1_YEAST Urea amidolyase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DUR1,2 PE=1 SV=2
Length = 1835
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
+++ IE F+ + FFG + +E+ I RH+EVQ++GD +G + L +RDC +
Sbjct: 803 SEEDIEHIFETVKHQGETFFGDAGVFLERFIENARHVEVQLMGDGFGKAIALGERDCSLQ 862
Query: 96 --AEKISESHP 104
+K+ E P
Sbjct: 863 RRNQKVIEETP 873
>sp|A5H0J2|DUR1_LACKL Urea amidolyase OS=Lachancea kluyveri GN=DUR1,2 PE=3 SV=1
Length = 1830
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 36 TKDAIEENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIY 95
+++ IE F+ + +FG + +E+ + RH+E+Q++GD YG + + +RDC +
Sbjct: 796 SENEIERVFETVQHQGKAYFGDSGVFLERFVENARHVEIQMMGDGYGKAIAIGERDCSLQ 855
Query: 96 --AEKISESHP 104
+KI E P
Sbjct: 856 RRNQKIIEETP 866
>sp|P78820|ACAC_SCHPO Acetyl-CoA carboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cut6 PE=1 SV=2
Length = 2280
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 42 ENFKRAGPKLWLFFGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKI 99
E F +A ++ + V K G+ RH+EVQIL D+YG+ + L+ RDC + +KI
Sbjct: 279 EKFAQAFQQVLDELPGSPVFVMKLAGQARHLEVQILADQYGNNISLFGRDCSVQRRHQKI 338
Query: 100 SESHPKSL 107
E P ++
Sbjct: 339 IEEAPVTI 346
>sp|Q00955|ACAC_YEAST Acetyl-CoA carboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ACC1 PE=1 SV=2
Length = 2233
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 60 MLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
+ + K GR RH+EVQ+L D+YG + L+ RDC + +KI E P ++
Sbjct: 287 IFIMKLAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTI 336
>sp|O00763|ACACB_HUMAN Acetyl-CoA carboxylase 2 OS=Homo sapiens GN=ACACB PE=1 SV=3
Length = 2458
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 70 RHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
RH+EVQIL D+YG+ V L+ RDC I +KI E P ++
Sbjct: 499 RHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATI 538
>sp|P24182|ACCC_ECOLI Biotin carboxylase OS=Escherichia coli (strain K12) GN=accC PE=1
SV=2
Length = 449
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 55 FGKDDMLVEKDIGRPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHP 104
F D + +EK + PRH+E+Q+L D G+ ++L +RDC + +K+ E P
Sbjct: 193 FSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAP 244
>sp|P11029|ACAC_CHICK Acetyl-CoA carboxylase OS=Gallus gallus GN=ACAC PE=1 SV=1
Length = 2324
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 68 RPRHIEVQILGDKYGDVVHLYDRDCPIYA--EKISESHPKSL 107
+ RH+EVQIL D+YG+ + L+ RDC + +KI E P S+
Sbjct: 354 QSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPASI 395
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,108,413
Number of Sequences: 539616
Number of extensions: 1610652
Number of successful extensions: 3561
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3490
Number of HSP's gapped (non-prelim): 75
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)