Query psy11795
Match_columns 313
No_of_seqs 379 out of 2331
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 19:09:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11795.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11795hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1214|consensus 99.3 3.6E-12 7.7E-17 125.4 10.2 156 7-202 704-866 (1289)
2 KOG1214|consensus 99.2 3.4E-11 7.3E-16 118.7 8.8 125 93-240 720-856 (1289)
3 KOG1219|consensus 99.2 2.2E-11 4.7E-16 129.1 7.1 100 4-150 3870-3973(4289)
4 KOG1219|consensus 99.1 2.8E-10 6.2E-15 121.0 8.1 103 42-192 3865-3973(4289)
5 KOG1217|consensus 99.0 7.7E-09 1.7E-13 100.1 13.7 199 6-245 137-353 (487)
6 KOG4289|consensus 99.0 1.8E-09 3.9E-14 111.4 8.9 84 21-147 1220-1308(2531)
7 KOG4260|consensus 98.9 1E-09 2.3E-14 96.1 4.0 81 92-191 221-304 (350)
8 KOG1217|consensus 98.9 6E-08 1.3E-12 93.9 15.7 173 21-244 108-306 (487)
9 PF00683 TB: TB domain; Inter 98.7 1.3E-09 2.8E-14 69.8 -1.8 35 276-312 1-35 (42)
10 KOG4289|consensus 98.6 4.4E-08 9.5E-13 101.5 6.4 98 133-246 1215-1317(2531)
11 PF07645 EGF_CA: Calcium-bindi 98.6 4.3E-08 9.4E-13 63.1 3.9 41 159-199 1-42 (42)
12 KOG4260|consensus 98.4 3.4E-07 7.3E-12 80.6 6.0 83 138-232 215-299 (350)
13 PF07645 EGF_CA: Calcium-bindi 98.4 1.9E-07 4.1E-12 60.1 2.8 34 120-153 4-38 (42)
14 PF12662 cEGF: Complement Clr- 98.0 5.8E-06 1.3E-10 46.0 2.5 24 139-162 1-24 (24)
15 PF12662 cEGF: Complement Clr- 97.9 8.9E-06 1.9E-10 45.3 2.3 24 181-204 1-24 (24)
16 PF14670 FXa_inhibition: Coagu 97.8 2.1E-05 4.5E-10 48.6 2.9 32 167-199 5-36 (36)
17 KOG1225|consensus 97.7 0.0001 2.2E-09 72.0 7.7 125 23-194 234-365 (525)
18 KOG1225|consensus 97.6 0.00044 9.6E-09 67.7 10.3 95 92-243 268-365 (525)
19 smart00179 EGF_CA Calcium-bind 97.4 0.00022 4.7E-09 44.4 3.9 32 159-191 1-33 (39)
20 PF14670 FXa_inhibition: Coagu 97.4 8.7E-05 1.9E-09 45.8 1.9 33 124-157 4-36 (36)
21 PF12947 EGF_3: EGF domain; I 97.4 0.00012 2.6E-09 45.2 2.3 33 165-199 3-36 (36)
22 KOG0994|consensus 97.3 0.0013 2.7E-08 68.4 9.9 121 22-158 884-1017(1758)
23 PF12947 EGF_3: EGF domain; I 97.2 0.00017 3.7E-09 44.5 1.6 29 123-151 3-32 (36)
24 PF00008 EGF: EGF-like domain 97.1 0.00018 3.9E-09 43.2 0.9 27 4-34 4-31 (32)
25 PF06247 Plasmod_Pvs28: Plasmo 97.0 0.00019 4E-09 60.4 0.6 104 127-239 7-119 (197)
26 KOG0994|consensus 97.0 0.0041 8.8E-08 64.8 9.8 109 131-250 830-953 (1758)
27 smart00179 EGF_CA Calcium-bind 97.0 0.0011 2.3E-08 41.1 3.8 24 126-149 9-33 (39)
28 PF00008 EGF: EGF-like domain 97.0 0.00057 1.2E-08 41.0 2.3 27 167-193 3-31 (32)
29 smart00181 EGF Epidermal growt 96.5 0.0033 7.2E-08 38.0 3.3 28 4-36 6-34 (35)
30 cd00054 EGF_CA Calcium-binding 96.5 0.004 8.8E-08 38.0 3.6 32 160-192 2-34 (38)
31 PF06247 Plasmod_Pvs28: Plasmo 96.5 0.0023 5E-08 53.9 2.9 142 5-197 7-166 (197)
32 PF00683 TB: TB domain; Inter 96.4 0.00012 2.5E-09 46.9 -4.0 35 216-252 2-36 (42)
33 cd00054 EGF_CA Calcium-binding 96.2 0.0063 1.4E-07 37.1 3.2 28 4-36 9-37 (38)
34 cd00053 EGF Epidermal growth f 96.2 0.0068 1.5E-07 36.3 3.3 26 4-34 6-32 (36)
35 cd01475 vWA_Matrilin VWA_Matri 96.0 0.008 1.7E-07 52.9 4.1 44 153-197 180-223 (224)
36 KOG1226|consensus 96.0 0.052 1.1E-06 54.9 10.1 137 92-253 481-628 (783)
37 smart00181 EGF Epidermal growt 95.8 0.015 3.2E-07 35.1 3.7 26 168-193 6-31 (35)
38 cd00053 EGF Epidermal growth f 95.8 0.016 3.5E-07 34.6 3.7 27 167-193 5-32 (36)
39 cd01475 vWA_Matrilin VWA_Matri 95.6 0.015 3.2E-07 51.2 4.2 43 102-154 180-222 (224)
40 PF12661 hEGF: Human growth fa 95.3 0.0072 1.5E-07 28.6 0.6 13 24-36 1-13 (13)
41 KOG1226|consensus 94.2 0.32 6.9E-06 49.4 9.6 93 131-245 467-580 (783)
42 PF07974 EGF_2: EGF-like domai 93.0 0.11 2.4E-06 31.0 2.6 22 8-36 11-32 (32)
43 PHA03099 epidermal growth fact 88.7 0.33 7.2E-06 38.4 2.3 35 4-41 51-85 (139)
44 KOG1836|consensus 86.5 21 0.00046 40.6 15.2 53 185-250 925-978 (1705)
45 PF12946 EGF_MSP1_1: MSP1 EGF 76.3 1.4 3.1E-05 27.2 1.0 24 128-151 7-32 (37)
46 KOG1836|consensus 75.5 5.6 0.00012 44.9 6.0 14 25-38 697-710 (1705)
47 smart00051 DSL delta serrate l 69.5 9.2 0.0002 26.6 4.0 46 182-244 17-63 (63)
48 cd00055 EGF_Lam Laminin-type e 63.3 6.1 0.00013 25.9 2.0 20 287-310 17-37 (50)
49 smart00180 EGF_Lam Laminin-typ 62.1 6.8 0.00015 25.2 2.0 19 288-310 17-36 (46)
50 PHA03099 epidermal growth fact 58.3 9.8 0.00021 30.3 2.6 31 125-159 50-82 (139)
51 PF09064 Tme5_EGF_like: Thromb 53.2 10 0.00022 22.8 1.6 14 22-35 17-30 (34)
52 PHA02887 EGF-like protein; Pro 45.7 22 0.00047 27.9 2.7 31 125-159 91-123 (126)
53 PF00954 S_locus_glycop: S-loc 43.9 25 0.00054 27.0 2.9 31 160-192 77-108 (110)
54 PHA02887 EGF-like protein; Pro 43.4 14 0.00029 29.0 1.3 31 270-306 91-122 (126)
55 PF00053 Laminin_EGF: Laminin 36.3 16 0.00035 23.6 0.7 20 287-310 16-36 (49)
56 KOG1218|consensus 31.8 3.8E+02 0.0083 24.1 10.6 30 277-310 270-301 (316)
57 KOG1215|consensus 29.1 90 0.0019 33.3 5.2 63 131-196 337-400 (877)
58 KOG3514|consensus 24.3 55 0.0012 35.4 2.4 37 203-246 622-660 (1591)
59 PF01683 EB: EB module; Inter 23.6 1E+02 0.0022 20.0 2.8 11 24-34 38-48 (52)
60 PTZ00214 high cysteine membran 23.0 3.1E+02 0.0067 29.1 7.6 56 92-164 650-706 (800)
61 KOG3516|consensus 22.1 73 0.0016 34.8 2.8 37 155-193 540-578 (1306)
62 KOG3512|consensus 20.8 3.1E+02 0.0068 27.0 6.5 21 131-151 285-306 (592)
No 1
>KOG1214|consensus
Probab=99.35 E-value=3.6e-12 Score=125.43 Aligned_cols=156 Identities=26% Similarity=0.555 Sum_probs=118.1
Q ss_pred CCCeeecCCCCCCCCCeEeeCCCCCeecCCCcceecCCCCC--CCccCCCCCccCCCCCCceecCCcccccCCcccCCCC
Q psy11795 7 INGVMINFPPNVCRSRYRDYCCPGWTLKQATGLCIIHYRTG--PCYTKVVNDMCQGQLEGVVCTKQLCCATVGRAWGHPC 84 (313)
Q Consensus 7 ~ng~C~n~~g~~c~~~y~C~C~~G~~g~~~~~~~~~~c~~~--~C~~~~~~~~C~~~~~~~~C~~~~C~~~~~~~~~~~C 84 (313)
.++.|...++ -.|.|+|..||.|+.-..+.+++|+.. .| ..++.|++..+.|.|.
T Consensus 704 t~a~C~pg~~----~~~tcecs~g~~gdgr~c~d~~eca~~~~~C---Gp~s~Cin~pg~~rce---------------- 760 (1289)
T KOG1214|consen 704 TTARCHPGTG----VDYTCECSSGYQGDGRNCVDENECATGFHRC---GPNSVCINLPGSYRCE---------------- 760 (1289)
T ss_pred CCccccCCCC----cceEEEEeeccCCCCCCCCChhhhccCCCCC---CCCceeecCCCceeEE----------------
Confidence 3566777766 589999999999987554445555433 34 3578999988889988
Q ss_pred CCCCCCCCCCCCceecCCCCCcccCccCCCCCCcCccccCCCCCC-C--CeeeeCC-CCeeeecCCCcccCCCCCCcccC
Q psy11795 85 EHCPAQLDCDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCR-G--GRCINTP-GSFTCECARGKSRNPDTNACEDR 160 (313)
Q Consensus 85 ~~C~~~~~C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~-~--~~C~n~~-gsy~C~C~~G~~~~~~~~~C~di 160 (313)
|..||....+...|..|-. ...++.|....+.|. + ++|+..- ++|.|.|.+||.+ ++..|.++
T Consensus 761 --------C~~gy~F~dd~~tCV~i~~---pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsG--DG~~c~dv 827 (1289)
T KOG1214|consen 761 --------CRSGYEFADDRHTCVLITP---PAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSG--DGHQCTDV 827 (1289)
T ss_pred --------EeecceeccCCcceEEecC---CCCCCccccCccccCcCCceEEEecCCceEEEeecCCccC--Cccccccc
Confidence 8888887776677874321 012333466667775 3 6676654 5699999999998 56889999
Q ss_pred ccccCCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCceeeC
Q psy11795 161 NECREEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSCIDA 202 (313)
Q Consensus 161 deC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~ 202 (313)
|||. ++.|+. ++|+|++|+|.|+|.+||.+ |+..|++-
T Consensus 828 DeC~--psrChp~A~CyntpgsfsC~C~pGy~G--DGf~CVP~ 866 (1289)
T KOG1214|consen 828 DECS--PSRCHPAATCYNTPGSFSCRCQPGYYG--DGFQCVPD 866 (1289)
T ss_pred cccC--ccccCCCceEecCCCcceeecccCccC--CCceecCC
Confidence 9999 888986 99999999999999999998 58888753
No 2
>KOG1214|consensus
Probab=99.21 E-value=3.4e-11 Score=118.70 Aligned_cols=125 Identities=33% Similarity=0.744 Sum_probs=103.5
Q ss_pred CCCCceecCCCCCcccCccCCCCCCcCccccCCCCCC-CCeeeeCCCCeeeecCCCcccCCCCCCcc------cCccccC
Q psy11795 93 CDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCR-GGRCINTPGSFTCECARGKSRNPDTNACE------DRNECRE 165 (313)
Q Consensus 93 C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~~~~~~C~------dideC~~ 165 (313)
|..||.++. +.|.|++|| ++.++.|. ++.|+|.+++|+|.|..||....++.+|+ .++.|..
T Consensus 720 cs~g~~gdg--r~c~d~~ec---------a~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~ 788 (1289)
T KOG1214|consen 720 CSSGYQGDG--RNCVDENEC---------ATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCED 788 (1289)
T ss_pred EeeccCCCC--CCCCChhhh---------ccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCcccc
Confidence 999999887 669999999 67788896 79999999999999999999888888887 3577887
Q ss_pred CCCCCC---CCEEEeCCC-CcEEecCCCceeCCCCCceeeCCCCCCCCCCCC-CCccCCCCCCCCCCeeeEecCCCCCcC
Q psy11795 166 EPNICA---NGKCVNTDG-GFYCICNPGFIPTQDRMSCIDARQGSCYTSLTS-DNQCKNKLPIRLSRKDCCCGKNMGKAW 240 (313)
Q Consensus 166 ~~~~C~---~~~C~n~~g-~y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~~~-~~~C~~~~~~~~~~~~C~C~~~~g~g~ 240 (313)
..+.|. +++|+...+ .|.|.|.+||.+ |+..|.|++ +|..+.|. +++|.+..+ ++.|+| -+||
T Consensus 789 g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsG--DG~~c~dvD--eC~psrChp~A~Cyntpg----sfsC~C----~pGy 856 (1289)
T KOG1214|consen 789 GSHTCAIAGQARCVHHGGSTYSCACLPGFSG--DGHQCTDVD--ECSPSRCHPAATCYNTPG----SFSCRC----QPGY 856 (1289)
T ss_pred CccccCcCCceEEEecCCceEEEeecCCccC--Ccccccccc--ccCccccCCCceEecCCC----cceeec----ccCc
Confidence 778886 266776654 599999999998 689998886 67776663 789998875 999999 6666
No 3
>KOG1219|consensus
Probab=99.20 E-value=2.2e-11 Score=129.11 Aligned_cols=100 Identities=28% Similarity=0.667 Sum_probs=89.5
Q ss_pred ccCCC-CeeecCCCCCCCCCeEeeCCCCCeecCCCcceecCCCCCCCccCCCCCccCCCCCCceecCCcccccCCcccCC
Q psy11795 4 DLEIN-GVMINFPPNVCRSRYRDYCCPGWTLKQATGLCIIHYRTGPCYTKVVNDMCQGQLEGVVCTKQLCCATVGRAWGH 82 (313)
Q Consensus 4 ~~c~n-g~C~n~~g~~c~~~y~C~C~~G~~g~~~~~~~~~~c~~~~C~~~~~~~~C~~~~~~~~C~~~~C~~~~~~~~~~ 82 (313)
.||+| |+|+.++. ++|.|.|++-|+|..|+ ..+.+|..+|| +.+++|+.-.++|.|.
T Consensus 3870 npCqhgG~C~~~~~----ggy~CkCpsqysG~~CE-i~~epC~snPC---~~GgtCip~~n~f~Cn-------------- 3927 (4289)
T KOG1219|consen 3870 NPCQHGGTCISQPK----GGYKCKCPSQYSGNHCE-IDLEPCASNPC---LTGGTCIPFYNGFLCN-------------- 3927 (4289)
T ss_pred CcccCCCEecCCCC----CceEEeCcccccCcccc-cccccccCCCC---CCCCEEEecCCCeeEe--------------
Confidence 47885 58999998 79999999999999998 57788999999 5899999999999998
Q ss_pred CCCCCCCCCCCCCCceecCCCCCcc-c-CccCCCCCCcCccccCCCCCCC-CeeeeCCCCeeeecCCCccc
Q psy11795 83 PCEHCPAQLDCDEGHLKNIHSGQCV-D-IDECEAVPDIDECEAVPGLCRG-GRCINTPGSFTCECARGKSR 150 (313)
Q Consensus 83 ~C~~C~~~~~C~~Gf~~~~~~~~C~-d-ideC~~~~d~~~C~~~~~~C~~-~~C~n~~gsy~C~C~~G~~~ 150 (313)
|+.||+|.. |+ + |+|| +.+.|.+ +.|+|+.|+|.|.|.+||.+
T Consensus 3928 ----------C~~gyTG~~----Ce~~Gi~eC-----------s~n~C~~gg~C~n~~gsf~CncT~g~~g 3973 (4289)
T KOG1219|consen 3928 ----------CPNGYTGKR----CEARGISEC-----------SKNVCGTGGQCINIPGSFHCNCTPGILG 3973 (4289)
T ss_pred ----------CCCCccCce----eeccccccc-----------ccccccCCceeeccCCceEeccChhHhc
Confidence 999999998 98 4 8999 4556874 99999999999999999998
No 4
>KOG1219|consensus
Probab=99.07 E-value=2.8e-10 Score=120.96 Aligned_cols=103 Identities=34% Similarity=0.842 Sum_probs=91.1
Q ss_pred cCCCCCCCccCCCCCccCCC-CCCceecCCcccccCCcccCCCCCCCCCCCCCCCCceecCCCCCcc-cCccCCCCCCcC
Q psy11795 42 IHYRTGPCYTKVVNDMCQGQ-LEGVVCTKQLCCATVGRAWGHPCEHCPAQLDCDEGHLKNIHSGQCV-DIDECEAVPDID 119 (313)
Q Consensus 42 ~~c~~~~C~~~~~~~~C~~~-~~~~~C~~~~C~~~~~~~~~~~C~~C~~~~~C~~Gf~~~~~~~~C~-dideC~~~~d~~ 119 (313)
++|..+||+ ++++|... .++|.|. |++-|.|+. |+ ++..|
T Consensus 3865 d~C~~npCq---hgG~C~~~~~ggy~Ck------------------------CpsqysG~~----CEi~~epC------- 3906 (4289)
T KOG1219|consen 3865 DPCNDNPCQ---HGGTCISQPKGGYKCK------------------------CPSQYSGNH----CEIDLEPC------- 3906 (4289)
T ss_pred cccccCccc---CCCEecCCCCCceEEe------------------------CcccccCcc----cccccccc-------
Confidence 678899995 89999764 4678998 999999998 99 88999
Q ss_pred ccccCCCCCC-CCeeeeCCCCeeeecCCCcccCCCCCCcc-c-CccccCCCCCCCC-CEEEeCCCCcEEecCCCcee
Q psy11795 120 ECEAVPGLCR-GGRCINTPGSFTCECARGKSRNPDTNACE-D-RNECREEPNICAN-GKCVNTDGGFYCICNPGFIP 192 (313)
Q Consensus 120 ~C~~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~~~~~~C~-d-ideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~ 192 (313)
.+++|. +++|+...++|.|.|+.||+| ..|+ + ++||+ .++|.+ |.|+|++|+|.|.|.+||.+
T Consensus 3907 ----~snPC~~GgtCip~~n~f~CnC~~gyTG----~~Ce~~Gi~eCs--~n~C~~gg~C~n~~gsf~CncT~g~~g 3973 (4289)
T KOG1219|consen 3907 ----ASNPCLTGGTCIPFYNGFLCNCPNGYTG----KRCEARGISECS--KNVCGTGGQCINIPGSFHCNCTPGILG 3973 (4289)
T ss_pred ----cCCCCCCCCEEEecCCCeeEeCCCCccC----ceeecccccccc--cccccCCceeeccCCceEeccChhHhc
Confidence 455698 599999999999999999999 7887 3 89998 789998 99999999999999999984
No 5
>KOG1217|consensus
Probab=98.98 E-value=7.7e-09 Score=100.12 Aligned_cols=199 Identities=28% Similarity=0.622 Sum_probs=123.8
Q ss_pred CCCCeeecCCCCCCCCCeEeeCCCCCeecCCCcceecCCC--CCCCccCCCCCccCCCCCCceecCCcccccCCcccCCC
Q psy11795 6 EINGVMINFPPNVCRSRYRDYCCPGWTLKQATGLCIIHYR--TGPCYTKVVNDMCQGQLEGVVCTKQLCCATVGRAWGHP 83 (313)
Q Consensus 6 c~ng~C~n~~g~~c~~~y~C~C~~G~~g~~~~~~~~~~c~--~~~C~~~~~~~~C~~~~~~~~C~~~~C~~~~~~~~~~~ 83 (313)
+..+.|++.++ -...|+|.|..||.+..+.. ..+.|. ..+| .+...|.+...+|.|.
T Consensus 137 ~~~~~c~~~~~--~~~~~~c~C~~g~~~~~~~~-~~~~C~~~~~~c---~~~~~C~~~~~~~~C~--------------- 195 (487)
T KOG1217|consen 137 CIDGSCSNGPG--SVGPFRCSCTEGYEGEPCET-DLDECIQYSSPC---QNGGTCVNTGGSYLCS--------------- 195 (487)
T ss_pred eCchhhcCCCC--CCCceeeeeCCCcccccccc-cccccccCCCCc---CCCcccccCCCCeeEe---------------
Confidence 34556665431 11389999999999998874 224555 3457 3778898888778887
Q ss_pred CCCCCCCCCCCCCceecCCCC-----CcccCccCCCC--CCcCccccCCCCCC-C-CeeeeCCCCeeeecCCCcccCCCC
Q psy11795 84 CEHCPAQLDCDEGHLKNIHSG-----QCVDIDECEAV--PDIDECEAVPGLCR-G-GRCINTPGSFTCECARGKSRNPDT 154 (313)
Q Consensus 84 C~~C~~~~~C~~Gf~~~~~~~-----~C~dideC~~~--~d~~~C~~~~~~C~-~-~~C~n~~gsy~C~C~~G~~~~~~~ 154 (313)
|++||.+..... .|.+...|... .....|......+. . ++|+++.++|.|.+++||.+...
T Consensus 196 ---------c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~- 265 (487)
T KOG1217|consen 196 ---------CPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGDAC- 265 (487)
T ss_pred ---------CCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccccccCCCCcccccCCceeeeCCCCcccccc-
Confidence 777776654111 12211001000 00111111111222 1 78999999999999999998431
Q ss_pred CCcccCccccCCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCceeeCCCCCCC----CCCCC-CCccCCCCCCCCCCe
Q psy11795 155 NACEDRNECREEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSCIDARQGSCY----TSLTS-DNQCKNKLPIRLSRK 228 (313)
Q Consensus 155 ~~C~dideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~~~~~C~----~~~~~-~~~C~~~~~~~~~~~ 228 (313)
..+.++++|+.... |.+ ++|++..+.|.|.|++||.+... ..+.+. ..|. ...+. ++.|. .......+
T Consensus 266 ~~~~~~~~C~~~~~-c~~~~~C~~~~~~~~C~C~~g~~g~~~-~~~~~~--~~C~~~~~~~~c~~g~~C~--~~~~~~~~ 339 (487)
T KOG1217|consen 266 VTCVDVDSCALIAS-CPNGGTCVNVPGSYRCTCPPGFTGRLC-TECVDV--DECSPRNAGGPCANGGTCN--TLGSFGGF 339 (487)
T ss_pred ceeeeccccCCCCc-cCCCCeeecCCCcceeeCCCCCCCCCC-cccccc--ccccccccCCcCCCCcccc--cCCCCCCC
Confidence 35678999985544 876 99999999999999999997654 233332 2453 22233 23662 22334478
Q ss_pred eeEecCCCCCcC-CCCCC
Q psy11795 229 DCCCGKNMGKAW-GDECL 245 (313)
Q Consensus 229 ~C~C~~~~g~g~-g~~ce 245 (313)
.|.| +++| |..|+
T Consensus 340 ~C~c----~~~~~g~~C~ 353 (487)
T KOG1217|consen 340 RCAC----GPGFTGRRCE 353 (487)
T ss_pred CcCC----CCCCCCCccc
Confidence 8999 7777 88887
No 6
>KOG4289|consensus
Probab=98.96 E-value=1.8e-09 Score=111.43 Aligned_cols=84 Identities=35% Similarity=0.795 Sum_probs=72.2
Q ss_pred CCeEeeCCCCCeecCCCcceecCCCCCCCccCCCCCccCCCCCCceecCCcccccCCcccCCCCCCCCCCCCCCCCceec
Q psy11795 21 SRYRDYCCPGWTLKQATGLCIIHYRTGPCYTKVVNDMCQGQLEGVVCTKQLCCATVGRAWGHPCEHCPAQLDCDEGHLKN 100 (313)
Q Consensus 21 ~~y~C~C~~G~~g~~~~~~~~~~c~~~~C~~~~~~~~C~~~~~~~~C~~~~C~~~~~~~~~~~C~~C~~~~~C~~Gf~~~ 100 (313)
++++|.||+||+|+.|+ +.|+.|.++|| .++++|....++|.|. |.+||+|.
T Consensus 1220 nglrCrCPpGFTgd~Ce-TeiDlCYs~pC---~nng~C~srEggYtCe------------------------Crpg~tGe 1271 (2531)
T KOG4289|consen 1220 NGLRCRCPPGFTGDYCE-TEIDLCYSGPC---GNNGRCRSREGGYTCE------------------------CRPGFTGE 1271 (2531)
T ss_pred CceeEeCCCCCCccccc-chhHhhhcCCC---CCCCceEEecCceeEE------------------------ecCCcccc
Confidence 48999999999999998 58889999999 4889999998999999 99999998
Q ss_pred CCCCCcc-cC--ccCCCCCCcCccccCCCCCCC-CeeeeC-CCCeeeecCCC
Q psy11795 101 IHSGQCV-DI--DECEAVPDIDECEAVPGLCRG-GRCINT-PGSFTCECARG 147 (313)
Q Consensus 101 ~~~~~C~-di--deC~~~~d~~~C~~~~~~C~~-~~C~n~-~gsy~C~C~~G 147 (313)
. |+ +. ..| .|..|++ ++|++. .|.|.|.|+.|
T Consensus 1272 h----CEvs~~agrC-----------vpGvC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1272 H----CEVSARAGRC-----------VPGVCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred c----eeeecccCcc-----------ccceecCCCEEeecCCCceeccCCCc
Confidence 8 88 32 345 5778885 899987 47889999988
No 7
>KOG4260|consensus
Probab=98.90 E-value=1e-09 Score=96.06 Aligned_cols=81 Identities=38% Similarity=0.906 Sum_probs=65.9
Q ss_pred CCCCCceecCCCCCcccCccCCCCCCcCccccCCCCCC-CCeeeeCCCCeeeecCCCcccCCCCCCcccCccccCCCCCC
Q psy11795 92 DCDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCR-GGRCINTPGSFTCECARGKSRNPDTNACEDRNECREEPNIC 170 (313)
Q Consensus 92 ~C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~~~~~~C~dideC~~~~~~C 170 (313)
+|+.||.++. ..|.||||| ...+.+|. +..|+|+.|||.|...+||... +|+|..-...|
T Consensus 221 kCkkGW~lde--~gCvDvnEC---------~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g--------~d~C~~~~d~~ 281 (350)
T KOG4260|consen 221 KCKKGWKLDE--EGCVDVNEC---------QNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG--------VDECQFCADVC 281 (350)
T ss_pred hhcccceecc--cccccHHHH---------hcCCCCCChhheeecCCCceEecccccccCC--------hHHhhhhhhhc
Confidence 6999999986 559999999 56677887 5899999999999999999762 55665323444
Q ss_pred C--CCEEEeCCCCcEEecCCCce
Q psy11795 171 A--NGKCVNTDGGFYCICNPGFI 191 (313)
Q Consensus 171 ~--~~~C~n~~g~y~C~C~~Gy~ 191 (313)
. +..|.|++++|+|+|..|+.
T Consensus 282 ~~kn~~c~ni~~~~r~v~f~~~~ 304 (350)
T KOG4260|consen 282 ASKNRPCMNIDGQYRCVCFSGLI 304 (350)
T ss_pred ccCCCCcccCCccEEEEecccce
Confidence 3 47899999999999999876
No 8
>KOG1217|consensus
Probab=98.87 E-value=6e-08 Score=93.88 Aligned_cols=173 Identities=31% Similarity=0.701 Sum_probs=112.6
Q ss_pred CCeEeeCCCCCeecCCCcceecCCCCCCCccCCCCCccCCCC---CCceecCCcccccCCcccCCCCCCCCCCCCCCCCc
Q psy11795 21 SRYRDYCCPGWTLKQATGLCIIHYRTGPCYTKVVNDMCQGQL---EGVVCTKQLCCATVGRAWGHPCEHCPAQLDCDEGH 97 (313)
Q Consensus 21 ~~y~C~C~~G~~g~~~~~~~~~~c~~~~C~~~~~~~~C~~~~---~~~~C~~~~C~~~~~~~~~~~C~~C~~~~~C~~Gf 97 (313)
.+|.|.|++||.+..++... .|...+. .......|.... ..+.|. |..||
T Consensus 108 ~~~~c~c~~g~~~~~~~~~~--~C~~~~~-~~~~~~~c~~~~~~~~~~~c~------------------------C~~g~ 160 (487)
T KOG1217|consen 108 GSYECTCPPGYQGTPCEGEC--ECVTGPG-VCCIDGSCSNGPGSVGPFRCS------------------------CTEGY 160 (487)
T ss_pred CCceeeCCCccccCcCCcce--eecCCCC-CeeCchhhcCCCCCCCceeee------------------------eCCCc
Confidence 48999999999999887521 2222221 001344444422 234444 99999
Q ss_pred eecCCCCCcc-cCccCCCCCCcCccccCCCCCCC-CeeeeCCCCeeeecCCCcccCCCCCC-----ccc-----------
Q psy11795 98 LKNIHSGQCV-DIDECEAVPDIDECEAVPGLCRG-GRCINTPGSFTCECARGKSRNPDTNA-----CED----------- 159 (313)
Q Consensus 98 ~~~~~~~~C~-dideC~~~~d~~~C~~~~~~C~~-~~C~n~~gsy~C~C~~G~~~~~~~~~-----C~d----------- 159 (313)
.+.. +. +.++| ......|.+ +.|.+..++|.|.|+++|.+...... |.+
T Consensus 161 ~~~~----~~~~~~~C---------~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~ 227 (487)
T KOG1217|consen 161 EGEP----CETDLDEC---------IQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGAR 227 (487)
T ss_pred cccc----cccccccc---------ccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCC
Confidence 9988 66 33778 445556774 88999999999999999987533221 221
Q ss_pred CccccCCCCCCC-C-CEEEeCCCCcEEecCCCceeCCCCCceeeCCCCCCCCCC-CC-CCccCCCCCCCCCCeeeEecCC
Q psy11795 160 RNECREEPNICA-N-GKCVNTDGGFYCICNPGFIPTQDRMSCIDARQGSCYTSL-TS-DNQCKNKLPIRLSRKDCCCGKN 235 (313)
Q Consensus 160 ideC~~~~~~C~-~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~-~~-~~~C~~~~~~~~~~~~C~C~~~ 235 (313)
.+.|......+. . ++|+++.++|+|.|++||.+... ..+.+++ .|.... +. +++|++... .|.|.|
T Consensus 228 ~~~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~-~~~~~~~--~C~~~~~c~~~~~C~~~~~----~~~C~C--- 297 (487)
T KOG1217|consen 228 GPECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGDAC-VTCVDVD--SCALIASCPNGGTCVNVPG----SYRCTC--- 297 (487)
T ss_pred CCCcccccccccCCCCcccccCCceeeeCCCCcccccc-ceeeecc--ccCCCCccCCCCeeecCCC----cceeeC---
Confidence 223332222232 1 68999999999999999997541 3455554 555542 43 578988765 599999
Q ss_pred CCCcC-CCCC
Q psy11795 236 MGKAW-GDEC 244 (313)
Q Consensus 236 ~g~g~-g~~c 244 (313)
..|| |..+
T Consensus 298 -~~g~~g~~~ 306 (487)
T KOG1217|consen 298 -PPGFTGRLC 306 (487)
T ss_pred -CCCCCCCCC
Confidence 8888 7777
No 9
>PF00683 TB: TB domain; InterPro: IPR002212 Transforming growth factor beta (TGF-beta)-binding protein-like (TB) domain comes from human fibrillin-1[]. This domain is found in fibrillins and latent TGF-beta-binding proteins (LTBPs) which are localized to fibrillar structures in the extracellular matrix [].; GO: 0005488 binding; PDB: 2W86_A 1UZJ_B 1UZQ_A 1UZK_A 1UZP_A 1APJ_A 1KSQ_A.
Probab=98.68 E-value=1.3e-09 Score=69.80 Aligned_cols=35 Identities=46% Similarity=1.258 Sum_probs=28.8
Q ss_pred CCCCccCCCCcccceeeeccCCCCccCCCCccCCCCC
Q psy11795 276 NQCKNKLPIRLSRKDCCCGKNMGKAWGDECLQCPMIG 312 (313)
Q Consensus 276 ~~C~~~~~~~~~~~~C~C~~~~g~g~G~~C~~Cp~~~ 312 (313)
++|.+.|+.++|+++|+|+ +|.|||+.||+||..|
T Consensus 1 g~C~~~l~~~~tk~~CCCs--~G~aWG~~Ce~CP~~~ 35 (42)
T PF00683_consen 1 GQCSNPLPGNVTKSECCCS--VGRAWGSPCEPCPPPG 35 (42)
T ss_dssp TCEEEEEEEEEEHHHHHTT--T-SEETTTTEE---TT
T ss_pred CcCCCcCCCCeeccccCCC--CCCcCCCccccCCCCC
Confidence 4788999999999999998 9999999999999987
No 10
>KOG4289|consensus
Probab=98.63 E-value=4.4e-08 Score=101.52 Aligned_cols=98 Identities=31% Similarity=0.774 Sum_probs=79.9
Q ss_pred eeeCCCCeeeecCCCcccCCCCCCcc-cCccccCCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCcee-eCCCCCCCC
Q psy11795 133 CINTPGSFTCECARGKSRNPDTNACE-DRNECREEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSCI-DARQGSCYT 209 (313)
Q Consensus 133 C~n~~gsy~C~C~~G~~~~~~~~~C~-dideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~-d~~~~~C~~ 209 (313)
=++..++++|.|++||++ ..|+ +||+|- .++|.+ +.|....|+|+|.|++||+ |..|+ +.+...|..
T Consensus 1215 pi~pvnglrCrCPpGFTg----d~CeTeiDlCY--s~pC~nng~C~srEggYtCeCrpg~t----GehCEvs~~agrCvp 1284 (2531)
T KOG4289|consen 1215 PIHPVNGLRCRCPPGFTG----DYCETEIDLCY--SGPCGNNGRCRSREGGYTCECRPGFT----GEHCEVSARAGRCVP 1284 (2531)
T ss_pred eccccCceeEeCCCCCCc----ccccchhHhhh--cCCCCCCCceEEecCceeEEecCCcc----ccceeeecccCcccc
Confidence 456778999999999999 5787 899998 789987 9999999999999999998 56775 445566777
Q ss_pred CCCCC-CccCCCCCCCCCCeeeEecCCCCCcC-CCCCCC
Q psy11795 210 SLTSD-NQCKNKLPIRLSRKDCCCGKNMGKAW-GDECLQ 246 (313)
Q Consensus 210 ~~~~~-~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ce~ 246 (313)
..|.| ++|++... +++.|.| ..| .| ++.||.
T Consensus 1285 GvC~nggtC~~~~n---ggf~c~C--p~g-e~e~prC~v 1317 (2531)
T KOG4289|consen 1285 GVCKNGGTCVNLLN---GGFCCHC--PYG-EFEDPRCEV 1317 (2531)
T ss_pred ceecCCCEEeecCC---CceeccC--CCc-ccCCCceEE
Confidence 77764 69998754 5899999 555 45 888886
No 11
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=98.62 E-value=4.3e-08 Score=63.09 Aligned_cols=41 Identities=44% Similarity=1.083 Sum_probs=35.1
Q ss_pred cCccccCCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCce
Q psy11795 159 DRNECREEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSC 199 (313)
Q Consensus 159 dideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C 199 (313)
|||||+...+.|.. ++|+|+.|+|+|.|++||+....+..|
T Consensus 1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~C 42 (42)
T PF07645_consen 1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTTC 42 (42)
T ss_dssp ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSEE
T ss_pred CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCcC
Confidence 68999988889975 999999999999999999966555543
No 12
>KOG4260|consensus
Probab=98.45 E-value=3.4e-07 Score=80.55 Aligned_cols=83 Identities=31% Similarity=0.677 Sum_probs=62.2
Q ss_pred CCeee-ecCCCcccCCCCCCcccCccccCCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCceeeCCCCCCCCCCCCCC
Q psy11795 138 GSFTC-ECARGKSRNPDTNACEDRNECREEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSCIDARQGSCYTSLTSDN 215 (313)
Q Consensus 138 gsy~C-~C~~G~~~~~~~~~C~dideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~~~~~ 215 (313)
++-.| .|..||.++ ...|+|||||...+.+|.. ..|+|+.|||+|..++||... ...|.-. .+.|.. .+.
T Consensus 215 ~~k~C~kCkkGW~ld--e~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g--~d~C~~~-~d~~~~---kn~ 286 (350)
T KOG4260|consen 215 SSKGCSKCKKGWKLD--EEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG--VDECQFC-ADVCAS---KNR 286 (350)
T ss_pred CCCChhhhcccceec--ccccccHHHHhcCCCCCChhheeecCCCceEecccccccCC--hHHhhhh-hhhccc---CCC
Confidence 33445 799999985 4679999999988899975 899999999999999999852 2222210 123433 277
Q ss_pred ccCCCCCCCCCCeeeEe
Q psy11795 216 QCKNKLPIRLSRKDCCC 232 (313)
Q Consensus 216 ~C~~~~~~~~~~~~C~C 232 (313)
.|.+..+ .|+|+|
T Consensus 287 ~c~ni~~----~~r~v~ 299 (350)
T KOG4260|consen 287 PCMNIDG----QYRCVC 299 (350)
T ss_pred CcccCCc----cEEEEe
Confidence 8888766 899999
No 13
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=98.41 E-value=1.9e-07 Score=60.10 Aligned_cols=34 Identities=44% Similarity=0.990 Sum_probs=28.2
Q ss_pred ccccCCCCCC-CCeeeeCCCCeeeecCCCcccCCC
Q psy11795 120 ECEAVPGLCR-GGRCINTPGSFTCECARGKSRNPD 153 (313)
Q Consensus 120 ~C~~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~~~ 153 (313)
||...++.|. +++|+|+.|+|+|.|++||+....
T Consensus 4 EC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~ 38 (42)
T PF07645_consen 4 ECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDD 38 (42)
T ss_dssp TTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTT
T ss_pred ccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCC
Confidence 3377778897 699999999999999999985443
No 14
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=97.98 E-value=5.8e-06 Score=46.05 Aligned_cols=24 Identities=46% Similarity=0.994 Sum_probs=22.6
Q ss_pred CeeeecCCCcccCCCCCCcccCcc
Q psy11795 139 SFTCECARGKSRNPDTNACEDRNE 162 (313)
Q Consensus 139 sy~C~C~~G~~~~~~~~~C~dide 162 (313)
||+|+|++||++.++++.|+||||
T Consensus 1 sy~C~C~~Gy~l~~d~~~C~DIdE 24 (24)
T PF12662_consen 1 SYTCSCPPGYQLSPDGRSCEDIDE 24 (24)
T ss_pred CEEeeCCCCCcCCCCCCccccCCC
Confidence 699999999999999999999997
No 15
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=97.90 E-value=8.9e-06 Score=45.31 Aligned_cols=24 Identities=33% Similarity=0.814 Sum_probs=22.3
Q ss_pred CcEEecCCCceeCCCCCceeeCCC
Q psy11795 181 GFYCICNPGFIPTQDRMSCIDARQ 204 (313)
Q Consensus 181 ~y~C~C~~Gy~~~~~~~~C~d~~~ 204 (313)
||+|.|++||++..+++.|+||++
T Consensus 1 sy~C~C~~Gy~l~~d~~~C~DIdE 24 (24)
T PF12662_consen 1 SYTCSCPPGYQLSPDGRSCEDIDE 24 (24)
T ss_pred CEEeeCCCCCcCCCCCCccccCCC
Confidence 699999999999999999999974
No 16
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=97.79 E-value=2.1e-05 Score=48.56 Aligned_cols=32 Identities=38% Similarity=0.910 Sum_probs=26.3
Q ss_pred CCCCCCCEEEeCCCCcEEecCCCceeCCCCCce
Q psy11795 167 PNICANGKCVNTDGGFYCICNPGFIPTQDRMSC 199 (313)
Q Consensus 167 ~~~C~~~~C~n~~g~y~C~C~~Gy~~~~~~~~C 199 (313)
.+.|. ..|++++++|+|.|++||++..|+++|
T Consensus 5 NGgC~-h~C~~~~g~~~C~C~~Gy~L~~D~~tC 36 (36)
T PF14670_consen 5 NGGCS-HICVNTPGSYRCSCPPGYKLAEDGRTC 36 (36)
T ss_dssp GGGSS-SEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred CCCcC-CCCccCCCceEeECCCCCEECcCCCCC
Confidence 45576 699999999999999999999998876
No 17
>KOG1225|consensus
Probab=97.70 E-value=0.0001 Score=72.04 Aligned_cols=125 Identities=28% Similarity=0.639 Sum_probs=74.7
Q ss_pred eEeeCCCCCeecCCCc-ceecCCC-CCCCccCCCCCccCCCCCCceecCCccccc-C--CcccCCCCCCCCCCCCCCCCc
Q psy11795 23 YRDYCCPGWTLKQATG-LCIIHYR-TGPCYTKVVNDMCQGQLEGVVCTKQLCCAT-V--GRAWGHPCEHCPAQLDCDEGH 97 (313)
Q Consensus 23 y~C~C~~G~~g~~~~~-~~~~~c~-~~~C~~~~~~~~C~~~~~~~~C~~~~C~~~-~--~~~~~~~C~~C~~~~~C~~Gf 97 (313)
+.|.|+.+|++..++. .|...|. .+.|. .+...|..++.+..|....|... . +......| .|.+||
T Consensus 234 ~ic~c~~~~~g~~c~~~~C~~~c~~~g~c~--~G~CIC~~Gf~G~dC~e~~Cp~~cs~~g~~~~g~C-------iC~~g~ 304 (525)
T KOG1225|consen 234 GICECPEGYFGPLCSTIYCPGGCTGRGQCV--EGRCICPPGFTGDDCDELVCPVDCSGGGVCVDGEC-------ICNPGY 304 (525)
T ss_pred ceeecCCceeCCccccccCCCCCcccceEe--CCeEeCCCCCcCCCCCcccCCcccCCCceecCCEe-------ecCCCc
Confidence 4788888888887764 1211221 12332 12234556666666665555333 1 12222334 399999
Q ss_pred eecCCCCCcccCccCCCCCCcCccccCCCCCC-CCeeeeCCCCeeeecCCCcccCCCCCCcccCccccCCCCCCCC-CEE
Q psy11795 98 LKNIHSGQCVDIDECEAVPDIDECEAVPGLCR-GGRCINTPGSFTCECARGKSRNPDTNACEDRNECREEPNICAN-GKC 175 (313)
Q Consensus 98 ~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~~~~~~C~dideC~~~~~~C~~-~~C 175 (313)
+|.. |+ +-.| +..|. +++|+ .| +|.|.+||++ ..|... .|.+ +.|
T Consensus 305 ~G~d----Cs-~~~c------------padC~g~G~Ci--~G--~C~C~~Gy~G----~~C~~~--------~C~~~g~c 351 (525)
T KOG1225|consen 305 SGKD----CS-IRRC------------PADCSGHGKCI--DG--ECLCDEGYTG----ELCIQR--------ACSGGGQC 351 (525)
T ss_pred cccc----cc-cccC------------CccCCCCCccc--CC--ceEeCCCCcC----Cccccc--------ccCCCcee
Confidence 9987 76 3335 34476 58897 33 7999999998 555432 2655 777
Q ss_pred EeCCCCcEEecCCCceeCC
Q psy11795 176 VNTDGGFYCICNPGFIPTQ 194 (313)
Q Consensus 176 ~n~~g~y~C~C~~Gy~~~~ 194 (313)
+|. |.|..||++..
T Consensus 352 v~g-----C~C~~Gw~G~d 365 (525)
T KOG1225|consen 352 VNG-----CKCKKGWRGPD 365 (525)
T ss_pred ccC-----ceeccCccCCC
Confidence 662 89999998653
No 18
>KOG1225|consensus
Probab=97.59 E-value=0.00044 Score=67.66 Aligned_cols=95 Identities=40% Similarity=1.001 Sum_probs=63.6
Q ss_pred CCCCCceecCCCCCcccCccCCCCCCcCccccCCCCCCC-CeeeeCCCCeeeecCCCcccCCCCCCcccCccccCCCCCC
Q psy11795 92 DCDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCRG-GRCINTPGSFTCECARGKSRNPDTNACEDRNECREEPNIC 170 (313)
Q Consensus 92 ~C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~~-~~C~n~~gsy~C~C~~G~~~~~~~~~C~dideC~~~~~~C 170 (313)
.|++||.|.. |.. -.| +..|.. +.+ ..+ .|+|.+||.+ +.|+.. .| +..|
T Consensus 268 IC~~Gf~G~d----C~e-~~C------------p~~cs~~g~~--~~g--~CiC~~g~~G----~dCs~~-~c---padC 318 (525)
T KOG1225|consen 268 ICPPGFTGDD----CDE-LVC------------PVDCSGGGVC--VDG--ECICNPGYSG----KDCSIR-RC---PADC 318 (525)
T ss_pred eCCCCCcCCC----CCc-ccC------------CcccCCCcee--cCC--EeecCCCccc----cccccc-cC---CccC
Confidence 4999999988 753 234 222542 444 333 8999999998 667532 24 3667
Q ss_pred CC-CEEEeCCCCcEEecCCCceeCCCCCceeeCCCCCCCCCCCCCCccCCCCCCCCCCeeeEecCCCCCcC-CCC
Q psy11795 171 AN-GKCVNTDGGFYCICNPGFIPTQDRMSCIDARQGSCYTSLTSDNQCKNKLPIRLSRKDCCCGKNMGKAW-GDE 243 (313)
Q Consensus 171 ~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~~~~~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ 243 (313)
.+ +.|+ .| +|.|.+||+ +..|... .|.. .+.|++ + |.| -.|| |.+
T Consensus 319 ~g~G~Ci--~G--~C~C~~Gy~----G~~C~~~---~C~~----~g~cv~-------g--C~C----~~Gw~G~d 365 (525)
T KOG1225|consen 319 SGHGKCI--DG--ECLCDEGYT----GELCIQR---ACSG----GGQCVN-------G--CKC----KKGWRGPD 365 (525)
T ss_pred CCCCccc--CC--ceEeCCCCc----CCccccc---ccCC----Cceecc-------C--cee----ccCccCCC
Confidence 65 8998 33 799999998 5566532 2655 567765 3 889 8888 766
No 19
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=97.43 E-value=0.00022 Score=44.36 Aligned_cols=32 Identities=50% Similarity=1.125 Sum_probs=27.2
Q ss_pred cCccccCCCCCCCC-CEEEeCCCCcEEecCCCce
Q psy11795 159 DRNECREEPNICAN-GKCVNTDGGFYCICNPGFI 191 (313)
Q Consensus 159 dideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~ 191 (313)
++++|... .+|.+ ++|+++.++|+|.|++||+
T Consensus 1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~ 33 (39)
T smart00179 1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT 33 (39)
T ss_pred CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc
Confidence 46788732 68886 7999999999999999997
No 20
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=97.42 E-value=8.7e-05 Score=45.81 Aligned_cols=33 Identities=39% Similarity=0.898 Sum_probs=25.7
Q ss_pred CCCCCCCCeeeeCCCCeeeecCCCcccCCCCCCc
Q psy11795 124 VPGLCRGGRCINTPGSFTCECARGKSRNPDTNAC 157 (313)
Q Consensus 124 ~~~~C~~~~C~n~~gsy~C~C~~G~~~~~~~~~C 157 (313)
....|. ..|++++++|+|.|++||++..++++|
T Consensus 4 ~NGgC~-h~C~~~~g~~~C~C~~Gy~L~~D~~tC 36 (36)
T PF14670_consen 4 NNGGCS-HICVNTPGSYRCSCPPGYKLAEDGRTC 36 (36)
T ss_dssp GGGGSS-SEEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred CCCCcC-CCCccCCCceEeECCCCCEECcCCCCC
Confidence 344566 799999999999999999998887665
No 21
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=97.39 E-value=0.00012 Score=45.22 Aligned_cols=33 Identities=36% Similarity=0.911 Sum_probs=24.0
Q ss_pred CCCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCce
Q psy11795 165 EEPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSC 199 (313)
Q Consensus 165 ~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C 199 (313)
...+.|+. ++|+++.++|+|+|++||.+ +|..|
T Consensus 3 ~~~~~C~~nA~C~~~~~~~~C~C~~Gy~G--dG~~C 36 (36)
T PF12947_consen 3 ENNGGCHPNATCTNTGGSYTCTCKPGYEG--DGFFC 36 (36)
T ss_dssp TGGGGS-TTCEEEE-TTSEEEEE-CEEEC--CSTCE
T ss_pred CCCCCCCCCcEeecCCCCEEeECCCCCcc--CCcCC
Confidence 34567774 99999999999999999998 45544
No 22
>KOG0994|consensus
Probab=97.33 E-value=0.0013 Score=68.41 Aligned_cols=121 Identities=26% Similarity=0.476 Sum_probs=57.4
Q ss_pred CeEee-CCCCCeecCCCcceecCCCCCCCccCCCC-----CccCCCCCCceecCCcccccCCcccCCCCCCCCCCCCCCC
Q psy11795 22 RYRDY-CCPGWTLKQATGLCIIHYRTGPCYTKVVN-----DMCQGQLEGVVCTKQLCCATVGRAWGHPCEHCPAQLDCDE 95 (313)
Q Consensus 22 ~y~C~-C~~G~~g~~~~~~~~~~c~~~~C~~~~~~-----~~C~~~~~~~~C~~~~C~~~~~~~~~~~C~~C~~~~~C~~ 95 (313)
++.|. |-.||.|+.--++- +.|++-||-..+.. ..|.-.. .-....|.|..|. .|..|+ .|.+
T Consensus 884 G~~CdrCl~GyyGdP~lg~g-~~CrPCpCP~gp~Sg~~~A~sC~~d~---~t~~ivC~C~~GY-~G~RCe------~CA~ 952 (1758)
T KOG0994|consen 884 GHSCDRCLDGYYGDPRLGSG-IGCRPCPCPDGPASGRQHADSCYLDT---RTQQIVCHCQEGY-SGSRCE------ICAD 952 (1758)
T ss_pred ccchhhhhccccCCcccCCC-CCCCCCCCCCCCccchhccccccccc---cccceeeecccCc-cccchh------hhcc
Confidence 67884 99999999754433 36766666322211 1221100 0001122222221 133343 5777
Q ss_pred CceecCC-CCCcccCccCCCCCCcCccccCCCCCC-C-Ce---eeeCCCCeee-ecCCCcccCCCCCCcc
Q psy11795 96 GHLKNIH-SGQCVDIDECEAVPDIDECEAVPGLCR-G-GR---CINTPGSFTC-ECARGKSRNPDTNACE 158 (313)
Q Consensus 96 Gf~~~~~-~~~C~dideC~~~~d~~~C~~~~~~C~-~-~~---C~n~~gsy~C-~C~~G~~~~~~~~~C~ 158 (313)
||+|+++ +.+|+ .=||..+.| ...+..|. . +. |.-...+-.| .|.+||.|+.-.+.|+
T Consensus 953 ~~fGnP~~GGtCq-~CeC~~NiD----~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck~Gf~GdA~~q~Cq 1017 (1758)
T KOG0994|consen 953 NHFGNPSEGGTCQ-KCECSNNID----LYDPGACDVATGACLKCLYHTEGDHCEHCKDGFYGDALRQNCQ 1017 (1758)
T ss_pred cccCCcccCCccc-cccccCCcC----ccCCCccchhhchhhhhhhcccccchhhccccchhHHHHhhhh
Confidence 7777752 34444 122321111 11233343 1 32 4333344566 6999999876656665
No 23
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=97.22 E-value=0.00017 Score=44.54 Aligned_cols=29 Identities=38% Similarity=0.820 Sum_probs=22.1
Q ss_pred cCCCCCC-CCeeeeCCCCeeeecCCCcccC
Q psy11795 123 AVPGLCR-GGRCINTPGSFTCECARGKSRN 151 (313)
Q Consensus 123 ~~~~~C~-~~~C~n~~gsy~C~C~~G~~~~ 151 (313)
..++.|. +|+|+++.++|.|+|++||.++
T Consensus 3 ~~~~~C~~nA~C~~~~~~~~C~C~~Gy~Gd 32 (36)
T PF12947_consen 3 ENNGGCHPNATCTNTGGSYTCTCKPGYEGD 32 (36)
T ss_dssp TGGGGS-TTCEEEE-TTSEEEEE-CEEECC
T ss_pred CCCCCCCCCcEeecCCCCEEeECCCCCccC
Confidence 3455676 7999999999999999999984
No 24
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=97.11 E-value=0.00018 Score=43.24 Aligned_cols=27 Identities=37% Similarity=0.590 Sum_probs=23.1
Q ss_pred ccCCC-CeeecCCCCCCCCCeEeeCCCCCeec
Q psy11795 4 DLEIN-GVMINFPPNVCRSRYRDYCCPGWTLK 34 (313)
Q Consensus 4 ~~c~n-g~C~n~~g~~c~~~y~C~C~~G~~g~ 34 (313)
+||.| |+|++... ++|+|.|++||+|.
T Consensus 4 ~~C~n~g~C~~~~~----~~y~C~C~~G~~G~ 31 (32)
T PF00008_consen 4 NPCQNGGTCIDLPG----GGYTCECPPGYTGK 31 (32)
T ss_dssp TSSTTTEEEEEEST----SEEEEEEBTTEEST
T ss_pred CcCCCCeEEEeCCC----CCEEeECCCCCccC
Confidence 47886 79999983 39999999999986
No 25
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=97.04 E-value=0.00019 Score=60.36 Aligned_cols=104 Identities=28% Similarity=0.700 Sum_probs=70.0
Q ss_pred CCCCCeeeeCCCCeeeecCCCcccCCCCCCcccCccccC---CCCCCCC-CEEEeCC-----CCcEEecCCCceeCCCCC
Q psy11795 127 LCRGGRCINTPGSFTCECARGKSRNPDTNACEDRNECRE---EPNICAN-GKCVNTD-----GGFYCICNPGFIPTQDRM 197 (313)
Q Consensus 127 ~C~~~~C~n~~gsy~C~C~~G~~~~~~~~~C~dideC~~---~~~~C~~-~~C~n~~-----g~y~C~C~~Gy~~~~~~~ 197 (313)
.|.++..+.+.+-|.|.|.+||.+. +..+|+...+|.. ...+|.. ++|++.. ..|+|.|.+||++.+ .
T Consensus 7 ~CKNG~LiQMSNHfEC~Cnegfvl~-~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~--~ 83 (197)
T PF06247_consen 7 ICKNGYLIQMSNHFECKCNEGFVLK-NENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQ--G 83 (197)
T ss_dssp --BTEEEEEESSEEEEEESTTEEEE-ETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESS--S
T ss_pred cccCCEEEEccCceEEEcCCCcEEc-cccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeC--C
Confidence 4788899999999999999999875 4478988878864 2467887 9999875 469999999999864 4
Q ss_pred ceeeCCCCCCCCCCCCCCccCCCCCCCCCCeeeEecCCCCCc
Q psy11795 198 SCIDARQGSCYTSLTSDNQCKNKLPIRLSRKDCCCGKNMGKA 239 (313)
Q Consensus 198 ~C~d~~~~~C~~~~~~~~~C~~~~~~~~~~~~C~C~~~~g~g 239 (313)
.|.+. .|.+..|.+|.|+-...+.. ...|.| +.|.-
T Consensus 84 vCvp~---~C~~~~Cg~GKCI~d~~~~~-~~~CSC--~IGkV 119 (197)
T PF06247_consen 84 VCVPN---KCNNKDCGSGKCILDPDNPN-NPTCSC--NIGKV 119 (197)
T ss_dssp SEEEG---GGSS---TTEEEEEEEGGGS-EEEEEE---TEEE
T ss_pred eEchh---hcCceecCCCeEEecCCCCC-CceeEe--eeceE
Confidence 77754 47776666788876644333 459999 55543
No 26
>KOG0994|consensus
Probab=97.01 E-value=0.0041 Score=64.81 Aligned_cols=109 Identities=24% Similarity=0.672 Sum_probs=72.7
Q ss_pred CeeeeCCCCe--ee-ecCCCcccCCCCCCcc---cCccccCCCCCCCCCEEEeCCCCcEE-ecCCCceeCC---CCCcee
Q psy11795 131 GRCINTPGSF--TC-ECARGKSRNPDTNACE---DRNECREEPNICANGKCVNTDGGFYC-ICNPGFIPTQ---DRMSCI 200 (313)
Q Consensus 131 ~~C~n~~gsy--~C-~C~~G~~~~~~~~~C~---dideC~~~~~~C~~~~C~n~~g~y~C-~C~~Gy~~~~---~~~~C~ 200 (313)
++|+=.+|.| .| .|.+||++.++=+.|+ -.|+|....+.|. .|.+..+++.| .|..||.|++ .+..|.
T Consensus 830 GQC~C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi--~CqD~T~G~~CdrCl~GyyGdP~lg~g~~Cr 907 (1758)
T KOG0994|consen 830 GQCQCRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCDPITGACI--DCQDSTTGHSCDRCLDGYYGDPRLGSGIGCR 907 (1758)
T ss_pred cceeeccccchhhccccCCCccCCCcCccccccCcccccCccccccc--cccccccccchhhhhccccCCcccCCCCCCC
Confidence 5565555655 35 7899999987767776 2466665555554 46677788899 6999999874 234444
Q ss_pred eCCCCCCCCCCCCC----CccCCCCCCCCCCeeeEecCCCCCcC-CCCCCCCCCC
Q psy11795 201 DARQGSCYTSLTSD----NQCKNKLPIRLSRKDCCCGKNMGKAW-GDECLQCPMI 250 (313)
Q Consensus 201 d~~~~~C~~~~~~~----~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ce~C~~~ 250 (313)
..+|...+.+. ..|... .......|.| ..|| |..|+.|.+.
T Consensus 908 ---PCpCP~gp~Sg~~~A~sC~~d--~~t~~ivC~C----~~GY~G~RCe~CA~~ 953 (1758)
T KOG0994|consen 908 ---PCPCPDGPASGRQHADSCYLD--TRTQQIVCHC----QEGYSGSRCEICADN 953 (1758)
T ss_pred ---CCCCCCCCccchhcccccccc--ccccceeeec----ccCccccchhhhccc
Confidence 34576666432 145443 3344678999 8888 9999998644
No 27
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=97.00 E-value=0.0011 Score=41.14 Aligned_cols=24 Identities=46% Similarity=1.147 Sum_probs=21.4
Q ss_pred CCCCC-CeeeeCCCCeeeecCCCcc
Q psy11795 126 GLCRG-GRCINTPGSFTCECARGKS 149 (313)
Q Consensus 126 ~~C~~-~~C~n~~gsy~C~C~~G~~ 149 (313)
.+|.+ ++|+++.++|.|.|++||.
T Consensus 9 ~~C~~~~~C~~~~g~~~C~C~~g~~ 33 (39)
T smart00179 9 NPCQNGGTCVNTVGSYRCECPPGYT 33 (39)
T ss_pred CCcCCCCEeECCCCCeEeECCCCCc
Confidence 56874 7999999999999999998
No 28
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=96.99 E-value=0.00057 Score=41.01 Aligned_cols=27 Identities=41% Similarity=1.125 Sum_probs=23.9
Q ss_pred CCCCCC-CEEEeCC-CCcEEecCCCceeC
Q psy11795 167 PNICAN-GKCVNTD-GGFYCICNPGFIPT 193 (313)
Q Consensus 167 ~~~C~~-~~C~n~~-g~y~C~C~~Gy~~~ 193 (313)
+++|.| ++|++.. ++|+|.|++||+|.
T Consensus 3 ~~~C~n~g~C~~~~~~~y~C~C~~G~~G~ 31 (32)
T PF00008_consen 3 SNPCQNGGTCIDLPGGGYTCECPPGYTGK 31 (32)
T ss_dssp TTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred CCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence 468988 9999998 99999999999863
No 29
>smart00181 EGF Epidermal growth factor-like domain.
Probab=96.53 E-value=0.0033 Score=38.04 Aligned_cols=28 Identities=39% Similarity=0.553 Sum_probs=23.4
Q ss_pred ccCCCCeeecCCCCCCCCCeEeeCCCCCee-cCC
Q psy11795 4 DLEINGVMINFPPNVCRSRYRDYCCPGWTL-KQA 36 (313)
Q Consensus 4 ~~c~ng~C~n~~g~~c~~~y~C~C~~G~~g-~~~ 36 (313)
.+|.+++|+++.+ +|+|.|++||+| ..|
T Consensus 6 ~~C~~~~C~~~~~-----~~~C~C~~g~~g~~~C 34 (35)
T smart00181 6 GPCSNGTCINTPG-----SYTCSCPPGYTGDKRC 34 (35)
T ss_pred CCCCCCEEECCCC-----CeEeECCCCCccCCcc
Confidence 4677779999976 999999999999 443
No 30
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=96.50 E-value=0.004 Score=37.95 Aligned_cols=32 Identities=47% Similarity=1.069 Sum_probs=26.4
Q ss_pred CccccCCCCCCCC-CEEEeCCCCcEEecCCCcee
Q psy11795 160 RNECREEPNICAN-GKCVNTDGGFYCICNPGFIP 192 (313)
Q Consensus 160 ideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~ 192 (313)
+++|... .+|.+ +.|+++.++|+|.|++||.+
T Consensus 2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~g 34 (38)
T cd00054 2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYTG 34 (38)
T ss_pred cccCCCC-CCcCCCCEeECCCCCeEeECCCCCcC
Confidence 5677632 67876 89999999999999999985
No 31
>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium. Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.
Probab=96.45 E-value=0.0023 Score=53.90 Aligned_cols=142 Identities=29% Similarity=0.659 Sum_probs=83.2
Q ss_pred cCCCCeeecCCCCCCCCCeEeeCCCCCeecCCCccee--cCCC-----CCCCccCCCCCccCCCC-----CCceecCCcc
Q psy11795 5 LEINGVMINFPPNVCRSRYRDYCCPGWTLKQATGLCI--IHYR-----TGPCYTKVVNDMCQGQL-----EGVVCTKQLC 72 (313)
Q Consensus 5 ~c~ng~C~n~~g~~c~~~y~C~C~~G~~g~~~~~~~~--~~c~-----~~~C~~~~~~~~C~~~~-----~~~~C~~~~C 72 (313)
.|-||.-+.... -|.|.|.+||.+.. +..|. .+|. ..+|. +-++|.... ..|.|.
T Consensus 7 ~CKNG~LiQMSN-----HfEC~Cnegfvl~~-EntCE~kv~C~~~e~~~K~Cg---dya~C~~~~~~~~~~~~~C~---- 73 (197)
T PF06247_consen 7 ICKNGYLIQMSN-----HFECKCNEGFVLKN-ENTCEEKVECDKLENVNKPCG---DYAKCINQANKGEERAYKCD---- 73 (197)
T ss_dssp --BTEEEEEESS-----EEEEEESTTEEEEE-TTEEEE----SG-GGTTSEEE---TTEEEEE-SSTTSSTSEEEE----
T ss_pred cccCCEEEEccC-----ceEEEcCCCcEEcc-ccccccceecCcccccCcccc---chhhhhcCCCcccceeEEEe----
Confidence 355666666553 79999999999884 33342 2332 34562 446775432 456777
Q ss_pred cccCCcccCCCCCCCCCCCCCCCCceecCCCCCcccCccCCCCCCcCccccCCCCCCCCeeeeCC---CCeeeecCCCcc
Q psy11795 73 CATVGRAWGHPCEHCPAQLDCDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCRGGRCINTP---GSFTCECARGKS 149 (313)
Q Consensus 73 ~~~~~~~~~~~C~~C~~~~~C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~~~~C~n~~---gsy~C~C~~G~~ 149 (313)
|.+||+... ..|. .++| ....|..+.|+-.+ ....|+|.-|+.
T Consensus 74 --------------------C~~gY~~~~--~vCv-p~~C-----------~~~~Cg~GKCI~d~~~~~~~~CSC~IGkV 119 (197)
T PF06247_consen 74 --------------------CINGYILKQ--GVCV-PNKC-----------NNKDCGSGKCILDPDNPNNPTCSCNIGKV 119 (197)
T ss_dssp --------------------E-TTEEESS--SSEE-EGGG-----------SS---TTEEEEEEEGGGSEEEEEE-TEEE
T ss_pred --------------------cccCceeeC--CeEc-hhhc-----------CceecCCCeEEecCCCCCCceeEeeeceE
Confidence 999999987 3465 3566 23447678887543 345999999998
Q ss_pred cCCCCCCcc--cCccccCCCCCCC-CCEEEeCCCCcEEecCCCceeCCCCC
Q psy11795 150 RNPDTNACE--DRNECREEPNICA-NGKCVNTDGGFYCICNPGFIPTQDRM 197 (313)
Q Consensus 150 ~~~~~~~C~--dideC~~~~~~C~-~~~C~n~~g~y~C~C~~Gy~~~~~~~ 197 (313)
..+...|. ...+|+ --|. +.+|..+.+-|+|.+..||.++..+.
T Consensus 120 -~~dn~kCtk~G~T~C~---LKCk~nE~CK~~~~~Y~C~~~~~~~~~~~~~ 166 (197)
T PF06247_consen 120 -PDDNKKCTKTGETKCS---LKCKENEECKLVDGYYKCVCKEGFPGDGEGE 166 (197)
T ss_dssp -TTTTTESEEEE-----------TTTEEEEEETTEEEEEE-TT-EEETTT-
T ss_pred -eccCCcccCCCcccee---eecCCCcceeeeCcEEEeecCCCCCCCCCcc
Confidence 33556776 334565 3354 47999999999999999998765543
No 32
>PF00683 TB: TB domain; InterPro: IPR002212 Transforming growth factor beta (TGF-beta)-binding protein-like (TB) domain comes from human fibrillin-1[]. This domain is found in fibrillins and latent TGF-beta-binding proteins (LTBPs) which are localized to fibrillar structures in the extracellular matrix [].; GO: 0005488 binding; PDB: 2W86_A 1UZJ_B 1UZQ_A 1UZK_A 1UZP_A 1APJ_A 1KSQ_A.
Probab=96.38 E-value=0.00012 Score=46.87 Aligned_cols=35 Identities=46% Similarity=1.258 Sum_probs=23.9
Q ss_pred ccCCCCCCCCCCeeeEecCCCCCcCCCCCCCCCCCCC
Q psy11795 216 QCKNKLPIRLSRKDCCCGKNMGKAWGDECLQCPMIGE 252 (313)
Q Consensus 216 ~C~~~~~~~~~~~~C~C~~~~g~g~g~~ce~C~~~~~ 252 (313)
+|.+.+...+++.+|.| ++|.+||..||.||..++
T Consensus 2 ~C~~~l~~~~tk~~CCC--s~G~aWG~~Ce~CP~~~t 36 (42)
T PF00683_consen 2 QCSNPLPGNVTKSECCC--SVGRAWGSPCEPCPPPGT 36 (42)
T ss_dssp CEEEEEEEEEEHHHHHT--TT-SEETTTTEE---TTS
T ss_pred cCCCcCCCCeeccccCC--CCCCcCCCccccCCCCCC
Confidence 45555555566788999 899999999999998765
No 33
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=96.18 E-value=0.0063 Score=37.07 Aligned_cols=28 Identities=29% Similarity=0.457 Sum_probs=23.4
Q ss_pred ccCC-CCeeecCCCCCCCCCeEeeCCCCCeecCC
Q psy11795 4 DLEI-NGVMINFPPNVCRSRYRDYCCPGWTLKQA 36 (313)
Q Consensus 4 ~~c~-ng~C~n~~g~~c~~~y~C~C~~G~~g~~~ 36 (313)
.+|. +++|+++.+ +|+|.|++||+|..|
T Consensus 9 ~~C~~~~~C~~~~~-----~~~C~C~~g~~g~~C 37 (38)
T cd00054 9 NPCQNGGTCVNTVG-----SYRCSCPPGYTGRNC 37 (38)
T ss_pred CCcCCCCEeECCCC-----CeEeECCCCCcCCcC
Confidence 4676 568999987 899999999999755
No 34
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=96.17 E-value=0.0068 Score=36.29 Aligned_cols=26 Identities=38% Similarity=0.623 Sum_probs=22.6
Q ss_pred ccCCC-CeeecCCCCCCCCCeEeeCCCCCeec
Q psy11795 4 DLEIN-GVMINFPPNVCRSRYRDYCCPGWTLK 34 (313)
Q Consensus 4 ~~c~n-g~C~n~~g~~c~~~y~C~C~~G~~g~ 34 (313)
.+|.+ ++|+++.+ +|+|.|++||.|.
T Consensus 6 ~~C~~~~~C~~~~~-----~~~C~C~~g~~g~ 32 (36)
T cd00053 6 NPCSNGGTCVNTPG-----SYRCVCPPGYTGD 32 (36)
T ss_pred CCCCCCCEEecCCC-----CeEeECCCCCccc
Confidence 56664 89999986 8999999999987
No 35
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=95.99 E-value=0.008 Score=52.94 Aligned_cols=44 Identities=23% Similarity=0.686 Sum_probs=37.5
Q ss_pred CCCCcccCccccCCCCCCCCCEEEeCCCCcEEecCCCceeCCCCC
Q psy11795 153 DTNACEDRNECREEPNICANGKCVNTDGGFYCICNPGFIPTQDRM 197 (313)
Q Consensus 153 ~~~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~Gy~~~~~~~ 197 (313)
.+..|.++++|...++.|. ..|+++.|+|.|.|+.||++..+++
T Consensus 180 ~~~~C~~~~~C~~~~~~c~-~~C~~~~g~~~c~c~~g~~~~~~~~ 223 (224)
T cd01475 180 QGKICVVPDLCATLSHVCQ-QVCISTPGSYLCACTEGYALLEDNK 223 (224)
T ss_pred ccccCcCchhhcCCCCCcc-ceEEcCCCCEEeECCCCccCCCCCC
Confidence 3578999999987777787 6899999999999999999877664
No 36
>KOG1226|consensus
Probab=95.98 E-value=0.052 Score=54.91 Aligned_cols=137 Identities=27% Similarity=0.629 Sum_probs=69.2
Q ss_pred CCCCCceecCCCCCcc-cCccCCCCCCcCccccCC--CCCC-CCeeeeCCCCeeeecCCCcccCCCCCCcccCc-cccC-
Q psy11795 92 DCDEGHLKNIHSGQCV-DIDECEAVPDIDECEAVP--GLCR-GGRCINTPGSFTCECARGKSRNPDTNACEDRN-ECRE- 165 (313)
Q Consensus 92 ~C~~Gf~~~~~~~~C~-dideC~~~~d~~~C~~~~--~~C~-~~~C~n~~gsy~C~C~~G~~~~~~~~~C~did-eC~~- 165 (313)
.|.+||.|.. |+ ..++=......+.|.... .+|. .+.|.= -.|+|.+...+...++.|+.-| .|..
T Consensus 481 ~C~~G~~G~~----CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C----GqC~C~~~~~~~i~G~fCECDnfsC~r~ 552 (783)
T KOG1226|consen 481 RCDEGWLGKK----CECSTDELSSSEEEDKCRENSDSPVCSGRGDCVC----GQCVCHKPDNGKIYGKFCECDNFSCERH 552 (783)
T ss_pred ecCCCCCCCc----ccCCccccCcHhHHhhccCCCCCCCcCCCCcEeC----CceEecCCCCCceeeeeeeccCcccccc
Confidence 4999999987 65 222111000122233211 1354 244421 1467777666444557776222 2332
Q ss_pred CCCCCCC-CEEEeCCCCcEEecCCCceeCCCCCceeeCCCCCCCCCC---CC-CCccCCCCCCCCCCeeeEecCCCCCcC
Q psy11795 166 EPNICAN-GKCVNTDGGFYCICNPGFIPTQDRMSCIDARQGSCYTSL---TS-DNQCKNKLPIRLSRKDCCCGKNMGKAW 240 (313)
Q Consensus 166 ~~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~---~~-~~~C~~~~~~~~~~~~C~C~~~~g~g~ 240 (313)
...+|.. ++|.=- +|+|.+||+|...+- +...+.|.+.- |+ .|+|.-. +|+| ..+...
T Consensus 553 ~g~lC~g~G~C~CG----~CvC~~GwtG~~C~C---~~std~C~~~~G~iCSGrG~C~Cg--------~C~C--~~~~~s 615 (783)
T KOG1226|consen 553 KGVLCGGHGRCECG----RCVCNPGWTGSACNC---PLSTDTCESSDGQICSGRGTCECG--------RCKC--TDPPYS 615 (783)
T ss_pred cCcccCCCCeEeCC----cEEcCCCCccCCCCC---CCCCccccCCCCceeCCCceeeCC--------ceEc--CCCCcC
Confidence 1234653 676432 699999999653221 12233454431 11 2344322 5777 545444
Q ss_pred CCCCCCCCCCCCC
Q psy11795 241 GDECLQCPMIGED 253 (313)
Q Consensus 241 g~~ce~C~~~~~~ 253 (313)
|.+||.||.-...
T Consensus 616 G~~CE~cptc~~~ 628 (783)
T KOG1226|consen 616 GEFCEKCPTCPDP 628 (783)
T ss_pred cchhhcCCCCCCc
Confidence 9999998864443
No 37
>smart00181 EGF Epidermal growth factor-like domain.
Probab=95.83 E-value=0.015 Score=35.10 Aligned_cols=26 Identities=42% Similarity=1.136 Sum_probs=22.0
Q ss_pred CCCCCCEEEeCCCCcEEecCCCceeC
Q psy11795 168 NICANGKCVNTDGGFYCICNPGFIPT 193 (313)
Q Consensus 168 ~~C~~~~C~n~~g~y~C~C~~Gy~~~ 193 (313)
.+|.+++|+++.++|+|.|++||.+.
T Consensus 6 ~~C~~~~C~~~~~~~~C~C~~g~~g~ 31 (35)
T smart00181 6 GPCSNGTCINTPGSYTCSCPPGYTGD 31 (35)
T ss_pred CCCCCCEEECCCCCeEeECCCCCccC
Confidence 56764589999999999999999863
No 38
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=95.77 E-value=0.016 Score=34.61 Aligned_cols=27 Identities=48% Similarity=1.206 Sum_probs=23.1
Q ss_pred CCCCCC-CEEEeCCCCcEEecCCCceeC
Q psy11795 167 PNICAN-GKCVNTDGGFYCICNPGFIPT 193 (313)
Q Consensus 167 ~~~C~~-~~C~n~~g~y~C~C~~Gy~~~ 193 (313)
..+|.+ ++|+++.++|+|.|+.||.+.
T Consensus 5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~ 32 (36)
T cd00053 5 SNPCSNGGTCVNTPGSYRCVCPPGYTGD 32 (36)
T ss_pred CCCCCCCCEEecCCCCeEeECCCCCccc
Confidence 456765 899999999999999999864
No 39
>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.
Probab=95.57 E-value=0.015 Score=51.20 Aligned_cols=43 Identities=35% Similarity=0.797 Sum_probs=34.8
Q ss_pred CCCCcccCccCCCCCCcCccccCCCCCCCCeeeeCCCCeeeecCCCcccCCCC
Q psy11795 102 HSGQCVDIDECEAVPDIDECEAVPGLCRGGRCINTPGSFTCECARGKSRNPDT 154 (313)
Q Consensus 102 ~~~~C~dideC~~~~d~~~C~~~~~~C~~~~C~n~~gsy~C~C~~G~~~~~~~ 154 (313)
....|+++++| ...++.|. ..|+++.|+|.|.|.+||.+..++
T Consensus 180 ~~~~C~~~~~C---------~~~~~~c~-~~C~~~~g~~~c~c~~g~~~~~~~ 222 (224)
T cd01475 180 QGKICVVPDLC---------ATLSHVCQ-QVCISTPGSYLCACTEGYALLEDN 222 (224)
T ss_pred ccccCcCchhh---------cCCCCCcc-ceEEcCCCCEEeECCCCccCCCCC
Confidence 35668888888 55666776 689999999999999999986554
No 40
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=95.25 E-value=0.0072 Score=28.56 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=10.3
Q ss_pred EeeCCCCCeecCC
Q psy11795 24 RDYCCPGWTLKQA 36 (313)
Q Consensus 24 ~C~C~~G~~g~~~ 36 (313)
.|+|++||+|..|
T Consensus 1 ~C~C~~G~~G~~C 13 (13)
T PF12661_consen 1 TCQCPPGWTGPNC 13 (13)
T ss_dssp EEEE-TTEETTTT
T ss_pred CccCcCCCcCCCC
Confidence 5999999999865
No 41
>KOG1226|consensus
Probab=94.19 E-value=0.32 Score=49.44 Aligned_cols=93 Identities=29% Similarity=0.740 Sum_probs=52.3
Q ss_pred CeeeeCCCCee---eecCCCcccCCCCCCcc----------cCccccCC--CCCCCC-CEEEeCCCCcEEecCCCceeCC
Q psy11795 131 GRCINTPGSFT---CECARGKSRNPDTNACE----------DRNECREE--PNICAN-GKCVNTDGGFYCICNPGFIPTQ 194 (313)
Q Consensus 131 ~~C~n~~gsy~---C~C~~G~~~~~~~~~C~----------dideC~~~--~~~C~~-~~C~n~~g~y~C~C~~Gy~~~~ 194 (313)
+.|. ..|.|. |.|.+||.| +.|+ ..+.|... ..+|.. |.|+=- +|+|.+...+.-
T Consensus 467 ~~C~-g~G~~~CG~C~C~~G~~G----~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~CG----qC~C~~~~~~~i 537 (783)
T KOG1226|consen 467 ALCH-GNGTFVCGQCRCDEGWLG----KKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVCG----QCVCHKPDNGKI 537 (783)
T ss_pred cccC-CCCcEEecceecCCCCCC----CcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeCC----ceEecCCCCCce
Confidence 3443 344444 689999988 4554 11334321 125654 666432 578877665444
Q ss_pred CCCceeeCCCCCCCCC---CCC-CCccCCCCCCCCCCeeeEecCCCCCcC-CCCCC
Q psy11795 195 DRMSCIDARQGSCYTS---LTS-DNQCKNKLPIRLSRKDCCCGKNMGKAW-GDECL 245 (313)
Q Consensus 195 ~~~~C~d~~~~~C~~~---~~~-~~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ce 245 (313)
-|+.|+.- ...|... +|. +|+|.-. +|+| .+|| |+.|+
T Consensus 538 ~G~fCECD-nfsC~r~~g~lC~g~G~C~CG--------~CvC----~~GwtG~~C~ 580 (783)
T KOG1226|consen 538 YGKFCECD-NFSCERHKGVLCGGHGRCECG--------RCVC----NPGWTGSACN 580 (783)
T ss_pred eeeeeecc-CcccccccCcccCCCCeEeCC--------cEEc----CCCCccCCCC
Confidence 46667532 2234332 121 5666432 6999 9999 99886
No 42
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=93.00 E-value=0.11 Score=31.05 Aligned_cols=22 Identities=23% Similarity=0.285 Sum_probs=17.1
Q ss_pred CCeeecCCCCCCCCCeEeeCCCCCeecCC
Q psy11795 8 NGVMINFPPNVCRSRYRDYCCPGWTLKQA 36 (313)
Q Consensus 8 ng~C~n~~g~~c~~~y~C~C~~G~~g~~~ 36 (313)
+|+|++.. .+|.|.+||+|+.|
T Consensus 11 ~G~C~~~~-------g~C~C~~g~~G~~C 32 (32)
T PF07974_consen 11 HGTCVSPC-------GRCVCDSGYTGPDC 32 (32)
T ss_pred CCEEeCCC-------CEEECCCCCcCCCC
Confidence 56676653 49999999999864
No 43
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=88.71 E-value=0.33 Score=38.41 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=28.0
Q ss_pred ccCCCCeeecCCCCCCCCCeEeeCCCCCeecCCCccee
Q psy11795 4 DLEINGVMINFPPNVCRSRYRDYCCPGWTLKQATGLCI 41 (313)
Q Consensus 4 ~~c~ng~C~n~~g~~c~~~y~C~C~~G~~g~~~~~~~~ 41 (313)
+-|+||+|.-.+. ...+.|.|..||+|..|+....
T Consensus 51 ~YClHG~C~yI~d---l~~~~CrC~~GYtGeRCEh~dL 85 (139)
T PHA03099 51 GYCLHGDCIHARD---IDGMYCRCSHGYTGIRCQHVVL 85 (139)
T ss_pred CEeECCEEEeecc---CCCceeECCCCcccccccceee
Confidence 5688999986653 1489999999999999997554
No 44
>KOG1836|consensus
Probab=86.49 E-value=21 Score=40.57 Aligned_cols=53 Identities=23% Similarity=0.590 Sum_probs=28.7
Q ss_pred ecCCCceeCCCCCceeeCCCCCCCCCCCCCCccCCCCCCCCCCeeeEecCCCCCcC-CCCCCCCCCC
Q psy11795 185 ICNPGFIPTQDRMSCIDARQGSCYTSLTSDNQCKNKLPIRLSRKDCCCGKNMGKAW-GDECLQCPMI 250 (313)
Q Consensus 185 ~C~~Gy~~~~~~~~C~d~~~~~C~~~~~~~~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ce~C~~~ 250 (313)
.|.+||.+.+.+..|...+ |...--.+..|....+ +|.| ..|- |..|..|...
T Consensus 925 ~c~~g~fnl~s~~gC~~c~---c~~~gs~~~~c~~~tG------qc~c----~~gVtgqrc~qc~~~ 978 (1705)
T KOG1836|consen 925 YCFKGFFNLNSGVGCEPCN---CDPTGSESSDCDVGTG------QCYC----RPGVTGQRCDQCETY 978 (1705)
T ss_pred cccccccccCCCCCccccc---ccccccccccccccCC------ceee----ecCccccccCccccC
Confidence 4667776655555555332 4332111335554433 6778 5555 7778777654
No 45
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=76.29 E-value=1.4 Score=27.16 Aligned_cols=24 Identities=29% Similarity=0.703 Sum_probs=18.5
Q ss_pred CC-CCeeeeCC-CCeeeecCCCcccC
Q psy11795 128 CR-GGRCINTP-GSFTCECARGKSRN 151 (313)
Q Consensus 128 C~-~~~C~n~~-gsy~C~C~~G~~~~ 151 (313)
|+ |+.|++.. |++.|+|..||...
T Consensus 7 cP~NA~C~~~~dG~eecrCllgyk~~ 32 (37)
T PF12946_consen 7 CPANAGCFRYDDGSEECRCLLGYKKV 32 (37)
T ss_dssp --TTEEEEEETTSEEEEEE-TTEEEE
T ss_pred CCCCcccEEcCCCCEEEEeeCCcccc
Confidence 55 79999887 99999999999863
No 46
>KOG1836|consensus
Probab=75.46 E-value=5.6 Score=44.94 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=13.0
Q ss_pred eeCCCCCeecCCCc
Q psy11795 25 DYCCPGWTLKQATG 38 (313)
Q Consensus 25 C~C~~G~~g~~~~~ 38 (313)
|.|++||+|..|+.
T Consensus 697 c~C~~g~tG~~Ce~ 710 (1705)
T KOG1836|consen 697 CTCPVGYTGQFCES 710 (1705)
T ss_pred ccCCCCcccchhhh
Confidence 99999999999984
No 47
>smart00051 DSL delta serrate ligand.
Probab=69.53 E-value=9.2 Score=26.56 Aligned_cols=46 Identities=15% Similarity=0.466 Sum_probs=30.0
Q ss_pred cEEecCCCceeCCCCCceeeCCCCCCCCCCCCCCccCCCCCCCCCCeeeEecCCCCCcC-CCCC
Q psy11795 182 FYCICNPGFIPTQDRMSCIDARQGSCYTSLTSDNQCKNKLPIRLSRKDCCCGKNMGKAW-GDEC 244 (313)
Q Consensus 182 y~C~C~~Gy~~~~~~~~C~d~~~~~C~~~~~~~~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~c 244 (313)
+.-.|.++|.+....+.|.+.+ .... +.+|... + .+.| .+|| |+.|
T Consensus 17 ~rv~C~~~~yG~~C~~~C~~~~--d~~~----~~~Cd~~-G------~~~C----~~Gw~G~~C 63 (63)
T smart00051 17 IRVTCDENYYGEGCNKFCRPRD--DFFG----HYTCDEN-G------NKGC----LEGWMGPYC 63 (63)
T ss_pred EEeeCCCCCcCCccCCEeCcCc--cccC----CccCCcC-C------CEec----CCCCcCCCC
Confidence 4567999999766666665322 2333 5678542 3 5889 8999 8765
No 48
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies
Probab=63.30 E-value=6.1 Score=25.86 Aligned_cols=20 Identities=25% Similarity=0.660 Sum_probs=16.9
Q ss_pred ccceeeeccCCCCcc-CCCCccCCC
Q psy11795 287 SRKDCCCGKNMGKAW-GDECLQCPM 310 (313)
Q Consensus 287 ~~~~C~C~~~~g~g~-G~~C~~Cp~ 310 (313)
....|.|. ++| |..|++|+.
T Consensus 17 ~~G~C~C~----~~~~G~~C~~C~~ 37 (50)
T cd00055 17 GTGQCECK----PNTTGRRCDRCAP 37 (50)
T ss_pred CCCEEeCC----CcCCCCCCCCCCC
Confidence 45689998 899 999999975
No 49
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai.
Probab=62.12 E-value=6.8 Score=25.22 Aligned_cols=19 Identities=26% Similarity=0.704 Sum_probs=16.4
Q ss_pred cceeeeccCCCCcc-CCCCccCCC
Q psy11795 288 RKDCCCGKNMGKAW-GDECLQCPM 310 (313)
Q Consensus 288 ~~~C~C~~~~g~g~-G~~C~~Cp~ 310 (313)
...|.|. ++| |..|++|+.
T Consensus 17 ~G~C~C~----~~~~G~~C~~C~~ 36 (46)
T smart00180 17 TGQCECK----PNVTGRRCDRCAP 36 (46)
T ss_pred CCEEECC----CCCCCCCCCcCCC
Confidence 4589998 899 999999975
No 50
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=58.32 E-value=9.8 Score=30.29 Aligned_cols=31 Identities=29% Similarity=0.828 Sum_probs=24.1
Q ss_pred CCCCCCCeeeeCC--CCeeeecCCCcccCCCCCCccc
Q psy11795 125 PGLCRGGRCINTP--GSFTCECARGKSRNPDTNACED 159 (313)
Q Consensus 125 ~~~C~~~~C~n~~--gsy~C~C~~G~~~~~~~~~C~d 159 (313)
.+.|-|++|.-.. ..+.|.|..||.| ..|+-
T Consensus 50 ~~YClHG~C~yI~dl~~~~CrC~~GYtG----eRCEh 82 (139)
T PHA03099 50 DGYCLHGDCIHARDIDGMYCRCSHGYTG----IRCQH 82 (139)
T ss_pred CCEeECCEEEeeccCCCceeECCCCccc----ccccc
Confidence 4557778887654 7899999999999 67763
No 51
>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet. Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane
Probab=53.16 E-value=10 Score=22.84 Aligned_cols=14 Identities=21% Similarity=0.541 Sum_probs=12.1
Q ss_pred CeEeeCCCCCeecC
Q psy11795 22 RYRDYCCPGWTLKQ 35 (313)
Q Consensus 22 ~y~C~C~~G~~g~~ 35 (313)
.+.|.||.||.++.
T Consensus 17 ~~~C~CPeGyIlde 30 (34)
T PF09064_consen 17 PGQCFCPEGYILDE 30 (34)
T ss_pred CCceeCCCceEecC
Confidence 46999999999875
No 52
>PHA02887 EGF-like protein; Provisional
Probab=45.67 E-value=22 Score=27.92 Aligned_cols=31 Identities=26% Similarity=0.738 Sum_probs=23.0
Q ss_pred CCCCCCCeeeeC--CCCeeeecCCCcccCCCCCCccc
Q psy11795 125 PGLCRGGRCINT--PGSFTCECARGKSRNPDTNACED 159 (313)
Q Consensus 125 ~~~C~~~~C~n~--~gsy~C~C~~G~~~~~~~~~C~d 159 (313)
.+.|-|++|.-. ...+.|.|..||.| ..|+.
T Consensus 91 k~YCiHG~C~yI~dL~epsCrC~~GYtG----~RCE~ 123 (126)
T PHA02887 91 NDFCINGECMNIIDLDEKFCICNKGYTG----IRCDE 123 (126)
T ss_pred hCEeeCCEEEccccCCCceeECCCCccc----CCCCc
Confidence 445667888755 45689999999998 56654
No 53
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=43.93 E-value=25 Score=26.98 Aligned_cols=31 Identities=32% Similarity=0.881 Sum_probs=22.7
Q ss_pred CccccCCCCCCCC-CEEEeCCCCcEEecCCCcee
Q psy11795 160 RNECREEPNICAN-GKCVNTDGGFYCICNPGFIP 192 (313)
Q Consensus 160 ideC~~~~~~C~~-~~C~n~~g~y~C~C~~Gy~~ 192 (313)
.|.|. ....|+. +.|. ......|.|.+||..
T Consensus 77 ~d~Cd-~y~~CG~~g~C~-~~~~~~C~Cl~GF~P 108 (110)
T PF00954_consen 77 KDQCD-VYGFCGPNGICN-SNNSPKCSCLPGFEP 108 (110)
T ss_pred ccCCC-CccccCCccEeC-CCCCCceECCCCcCC
Confidence 45676 3578886 9994 344567999999974
No 54
>PHA02887 EGF-like protein; Provisional
Probab=43.44 E-value=14 Score=29.04 Aligned_cols=31 Identities=32% Similarity=0.698 Sum_probs=23.7
Q ss_pred CCCCCCCCCCccCCCCcccceeeeccCCCCcc-CCCCc
Q psy11795 270 TSLTSDNQCKNKLPIRLSRKDCCCGKNMGKAW-GDECL 306 (313)
Q Consensus 270 ~~~~~~~~C~~~~~~~~~~~~C~C~~~~g~g~-G~~C~ 306 (313)
.++|-+|.|.-. ..+....|.|. .|| |..||
T Consensus 91 k~YCiHG~C~yI--~dL~epsCrC~----~GYtG~RCE 122 (126)
T PHA02887 91 NDFCINGECMNI--IDLDEKFCICN----KGYTGIRCD 122 (126)
T ss_pred hCEeeCCEEEcc--ccCCCceeECC----CCcccCCCC
Confidence 466778888553 35567799998 788 99998
No 55
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation. They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.
Probab=36.30 E-value=16 Score=23.55 Aligned_cols=20 Identities=35% Similarity=0.752 Sum_probs=15.1
Q ss_pred ccceeeeccCCCCcc-CCCCccCCC
Q psy11795 287 SRKDCCCGKNMGKAW-GDECLQCPM 310 (313)
Q Consensus 287 ~~~~C~C~~~~g~g~-G~~C~~Cp~ 310 (313)
....|.|. ++| |..|+.|..
T Consensus 16 ~~G~C~C~----~~~~G~~C~~C~~ 36 (49)
T PF00053_consen 16 STGQCVCK----PGTTGPRCDQCKP 36 (49)
T ss_dssp TCEEESBS----TTEESTTS-EE-T
T ss_pred CCCEEecc----ccccCCcCcCCCC
Confidence 45689998 899 999998864
No 56
>KOG1218|consensus
Probab=31.78 E-value=3.8e+02 Score=24.05 Aligned_cols=30 Identities=27% Similarity=0.552 Sum_probs=19.8
Q ss_pred CCCccCCCCcccceeeeccCCCCcc-CCCCc-cCCC
Q psy11795 277 QCKNKLPIRLSRKDCCCGKNMGKAW-GDECL-QCPM 310 (313)
Q Consensus 277 ~C~~~~~~~~~~~~C~C~~~~g~g~-G~~C~-~Cp~ 310 (313)
+|...+.....+..+.+. ++| ++.++ .++.
T Consensus 270 ~c~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 301 (316)
T KOG1218|consen 270 QCGGGLVCRPGKGSCRCS----PGAALATCQKICFL 301 (316)
T ss_pred eeCCCCccccccccccCC----CcccccccccccCC
Confidence 566666666666677775 677 77776 5544
No 57
>KOG1215|consensus
Probab=29.10 E-value=90 Score=33.25 Aligned_cols=63 Identities=29% Similarity=0.682 Sum_probs=44.2
Q ss_pred CeeeeCCCCeeeecCCCcccCCCCCCcccCccccCCCCCCCCCEEE-eCCCCcEEecCCCceeCCCC
Q psy11795 131 GRCINTPGSFTCECARGKSRNPDTNACEDRNECREEPNICANGKCV-NTDGGFYCICNPGFIPTQDR 196 (313)
Q Consensus 131 ~~C~n~~gsy~C~C~~G~~~~~~~~~C~dideC~~~~~~C~~~~C~-n~~g~y~C~C~~Gy~~~~~~ 196 (313)
+.+.++....++.|..++........ +.+.|....+.|. ..|+ +.++.|+|.|..||.+..++
T Consensus 337 ~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~Cs-q~C~~~~p~~~~c~c~~g~~~~~~~ 400 (877)
T KOG1215|consen 337 HKCPDVSVGPRCDCMGAKVLPLGART--DSNPCESDNGGCS-QLCVPNSPGTFKCACSPGYELRLDK 400 (877)
T ss_pred CCCCccccCCcccCCccceecccccc--cCCcccccCCccc-eeccCCCCCceeEecCCCcEeccCC
Confidence 45666777778888888876433333 2234444567776 5787 56899999999999987655
No 58
>KOG3514|consensus
Probab=24.35 E-value=55 Score=35.35 Aligned_cols=37 Identities=22% Similarity=0.601 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCC-CccCCCCCCCCCCeeeEecCCCCCcC-CCCCCC
Q psy11795 203 RQGSCYTSLTSD-NQCKNKLPIRLSRKDCCCGKNMGKAW-GDECLQ 246 (313)
Q Consensus 203 ~~~~C~~~~~~~-~~C~~~~~~~~~~~~C~C~~~~g~g~-g~~ce~ 246 (313)
+...|..+||.| |.|..... +|.|.|+ +.+| |..||.
T Consensus 622 ~~~~C~~nPC~N~g~C~egwN----rfiCDCs---~T~~~G~~Cer 660 (1591)
T KOG3514|consen 622 NEKICESNPCQNGGKCSEGWN----RFICDCS---GTGFEGRTCER 660 (1591)
T ss_pred hccccCCCcccCCCCcccccc----ccccccc---cCcccCccccc
Confidence 344788888875 69988776 9999993 6677 999985
No 59
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function. It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO
Probab=23.57 E-value=1e+02 Score=19.96 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=7.8
Q ss_pred EeeCCCCCeec
Q psy11795 24 RDYCCPGWTLK 34 (313)
Q Consensus 24 ~C~C~~G~~g~ 34 (313)
+|.|++||.-.
T Consensus 38 ~C~C~~g~~~~ 48 (52)
T PF01683_consen 38 RCQCPPGYVEV 48 (52)
T ss_pred EeECCCCCEec
Confidence 77787777654
No 60
>PTZ00214 high cysteine membrane protein Group 4; Provisional
Probab=23.00 E-value=3.1e+02 Score=29.12 Aligned_cols=56 Identities=25% Similarity=0.564 Sum_probs=34.8
Q ss_pred CCCCCceecCCCCCcccCccCCCCCCcCccccCCCCCCCCeeeeC-CCCeeeecCCCcccCCCCCCcccCcccc
Q psy11795 92 DCDEGHLKNIHSGQCVDIDECEAVPDIDECEAVPGLCRGGRCINT-PGSFTCECARGKSRNPDTNACEDRNECR 164 (313)
Q Consensus 92 ~C~~Gf~~~~~~~~C~dideC~~~~d~~~C~~~~~~C~~~~C~n~-~gsy~C~C~~G~~~~~~~~~C~dideC~ 164 (313)
+|..+|.+..+.++|.. +| . .+.. . + .. .+.-+|+|..||..+.++..|+....|.
T Consensus 650 ~C~~~~~ls~~~~~C~~--~C---------~-~~~~-~-~---~~~~~~~~C~C~~g~~p~~~~~~C~~~~~C~ 706 (800)
T PTZ00214 650 ECAGELFVSLDGQSCLE--EC---------T-GDKV-V-G---EVSGGVRRCWCERGFLPALDRSGCVLPTECP 706 (800)
T ss_pred cCCCCceecCcCCchhh--cC---------C-Cccc-c-c---cccCCcceeEecCCcccccCCCccccccCCC
Confidence 68999888877777853 55 1 1100 0 0 01 1234799999999877777787554554
No 61
>KOG3516|consensus
Probab=22.10 E-value=73 Score=34.78 Aligned_cols=37 Identities=32% Similarity=0.839 Sum_probs=30.3
Q ss_pred CCcccCccccCCCCCCCC-CEEEeCCCCcEEecC-CCceeC
Q psy11795 155 NACEDRNECREEPNICAN-GKCVNTDGGFYCICN-PGFIPT 193 (313)
Q Consensus 155 ~~C~dideC~~~~~~C~~-~~C~n~~g~y~C~C~-~Gy~~~ 193 (313)
..|.-+|.|. +++|.| +.|..+...|.|.|. .||.+.
T Consensus 540 d~C~i~drCl--PN~CehgG~C~Qs~~~f~C~C~~TGY~Ga 578 (1306)
T KOG3516|consen 540 DMCGISDRCL--PNPCEHGGKCSQSWDDFECNCELTGYKGA 578 (1306)
T ss_pred cccccccccC--CccccCCCcccccccceeEeccccccccc
Confidence 3455667787 899998 999998889999998 799843
No 62
>KOG3512|consensus
Probab=20.75 E-value=3.1e+02 Score=27.04 Aligned_cols=21 Identities=29% Similarity=0.795 Sum_probs=15.5
Q ss_pred CeeeeCCCC-eeeecCCCcccC
Q psy11795 131 GRCINTPGS-FTCECARGKSRN 151 (313)
Q Consensus 131 ~~C~n~~gs-y~C~C~~G~~~~ 151 (313)
..|+-...+ ++|.|.....|.
T Consensus 285 s~Cv~d~~~~ltCdC~HNTaGP 306 (592)
T KOG3512|consen 285 SRCVMDESSHLTCDCEHNTAGP 306 (592)
T ss_pred ceeeeccCCceEEecccCCCCC
Confidence 568776655 999998877664
Done!