RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11798
(245 letters)
>d1apja_ g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [TaxId:
9606]}
Length = 74
Score = 59.1 bits (143), Expect = 1e-12
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 100 CIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSM-GQAWGRYCLPCPSPNSGE 152
D+R CY ++ G C+ + + + +ECCC++ G+ WG C CP+
Sbjct: 2 AQDLRMSYCYAKFEGGKCSSPKSRNHSKQECCCALKGEGWGDPCELCPTEPDEA 55
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 55.3 bits (133), Expect = 2e-11
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
D+NECL+ + + C N PGS+ C CP + L P C+D
Sbjct: 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43
Score = 48.3 bits (115), Expect = 6e-09
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID 102
D+NEC + G C+N G C+CP F L+P + C+D
Sbjct: 2 DVNECLDPTTCIS-GNCVNTPGSYICDCPPDFELNPTRVGCVD 43
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 54.4 bits (131), Expect = 4e-11
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCI 101
DI+EC+ + +C G C N G CECP G LSPN CI
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
Score = 51.8 bits (124), Expect = 4e-10
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 19 DINECLELSNQCAF-RCHNVPGSFRCICPYGYALAPDGRHCI 59
DI+EC C CHN GS+RC CP G+ L+P+ CI
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 53.6 bits (129), Expect = 7e-11
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC 100
DI+EC+E G+C+ GKCIN G C CP G+ L+ + C
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 52.1 bits (125), Expect = 3e-10
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 18 EDINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHC 58
EDI+EC EL C +C N GSF+C CP GY L D R C
Sbjct: 1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 52.1 bits (125), Expect = 3e-10
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
+ D++EC E +C N GS+RC CP+GY L G C+D
Sbjct: 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVD 43
Score = 44.8 bits (106), Expect = 1e-07
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 58 CIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCID 102
+D++ECKE + C+ G+CIN G CECP G++L G +C+D
Sbjct: 2 AVDMDECKEPDV-CKHGQCINTDGSYRCECPFGYIL--AGNECVD 43
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 41
Score = 50.5 bits (121), Expect = 9e-10
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 20 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 61
I+EC + + C+ C N+ G ++C C G+ L P + C +
Sbjct: 1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41
Score = 42.0 bits (99), Expect = 1e-06
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 61 INECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDV 103
I+EC ++ C C+N+ GG C+C EGF L P+ C V
Sbjct: 1 IDEC-QDPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 41
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos
taurus) [TaxId: 9913]}
Length = 51
Score = 49.8 bits (119), Expect = 2e-09
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
C + C C RC C +GY L D + C+
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42
Score = 39.8 bits (93), Expect = 9e-06
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
C + G C+ C V C C G++L + C+ + C
Sbjct: 1 CSLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC 44
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 49.1 bits (117), Expect = 4e-09
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 20 INECLELSNQ---CAFRCHNVPGSFRCICPYGYALAPDGRHCID 60
I+EC + C CHN G F C C GY L + R C +
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
Score = 43.3 bits (102), Expect = 5e-07
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 61 INECKENEGICE--DGKCINIAGGVTCECPEGFMLSPNGMKCID 102
I+EC+ G D C N GG C C G++L N C +
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 49.6 bits (118), Expect = 4e-09
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 104 RQDVCYDSYQE------GTCTLLRKQPITVKECCCSMGQAWGRYCLPCPSPNSGE 152
R CY + C+ ++ CCCS+G+AWG C CP+ N+ E
Sbjct: 2 RSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSE 56
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 48.8 bits (116), Expect = 5e-09
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 8/48 (16%)
Query: 19 DINECLELSNQCAF--------RCHNVPGSFRCICPYGYALAPDGRHC 58
D++EC S CHN G + C C GY L D C
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
Score = 45.0 bits (106), Expect = 2e-07
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 59 IDINECKENEGICEDG-------KCINIAGGVTCECPEGFMLSPNGMKC 100
+D++EC E+ C N GG C C G+ L + C
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
>d1ksqa_ g.23.1.1 (A:) Transforming growth factor-beta binding
protein-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 49.5 bits (118), Expect = 6e-09
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 104 RQDVCYDSYQEG-TCTLLRKQPITVKECCCSMGQAWGRYC--LPCPSPNSGE 152
+ CY + + C + +T +ECCC+ G WG C PCP + E
Sbjct: 8 EKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAE 59
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human
(Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 47.2 bits (112), Expect = 2e-08
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 21 NECLELSN-QCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
NEC + + C+ C+N G + C CP Y L D ++C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
Score = 36.8 bits (85), Expect = 1e-04
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKC 100
NEC + + C N GG C CP + L + C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 46.7 bits (111), Expect = 2e-08
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMK-CI 101
DI+EC+ + +C G+C+N G C+C EG+ MK C+
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44
Score = 44.4 bits (105), Expect = 2e-07
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 19 DINECLELSNQCAF-RCHNVPGSFRCICPYGYAL-APDGRHCI 59
DI+EC + C +C N PG F C C GY ++C+
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 47.1 bits (112), Expect = 2e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
C + C CH S C C GY LA +G+ CI
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44
Score = 39.4 bits (92), Expect = 1e-05
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
C + G C+ C V C C G+ L+ NG CI C
Sbjct: 3 CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 46
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 46.7 bits (111), Expect = 3e-08
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 23 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
C + C C G RC C GY L D C +
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43
Score = 40.2 bits (94), Expect = 6e-06
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
C + G C C+ G C C G+ L + ++C + C
Sbjct: 2 CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPC 45
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 46.4 bits (110), Expect = 4e-08
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 20 INECLELSN---QCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 61
++EC C CHN G + C C GY L + C +
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45
Score = 40.3 bits (94), Expect = 5e-06
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 61 INECKENEGICE--DGKCINIAGGVTCECPEGFMLSPNGMKCIDV 103
++EC+ + G D C N GG C C G++L N C +
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSAL 45
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 43.2 bits (102), Expect = 4e-07
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 19 DINECLELSNQCAFRCHNVPGSFRCICPYGYALA-PDGRHC 58
DI+EC E C+ CHN+PG+F CIC ALA G C
Sbjct: 1 DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
Score = 35.5 bits (82), Expect = 3e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGFMLS-PNGMKC 100
DI+EC+ C G C N+ G C C L+ G C
Sbjct: 1 DIDECENGGF-C-SGVCHNLPGTFECICGPDSALAGQIGTDC 40
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 42.8 bits (101), Expect = 6e-07
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 21 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC 58
NECL+ + C+ C+++ + C+CP G+ L R C
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC 39
Score = 36.6 bits (85), Expect = 9e-05
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSPN 96
NEC +N G C C ++ G C CP+GF L
Sbjct: 3 NECLDNNGGCSH-VCNDLKIGYECLCPDGFQLVAQ 36
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 41.3 bits (97), Expect = 2e-06
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 18 EDINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
+D++EC +N C +C N GSF C C GY G C
Sbjct: 1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39
Score = 35.5 bits (82), Expect = 2e-04
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 60 DINECKENEGICE-DGKCINIAGGVTCECPEGF 91
D++EC CE GKCIN G C+C +G+
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGY 34
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 41.3 bits (97), Expect = 3e-06
Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINEC 64
C + +C C N C C GY LA + + C
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45
Score = 35.2 bits (81), Expect = 5e-04
Identities = 13/45 (28%), Positives = 16/45 (35%)
Query: 64 CKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVC 108
C G CE + V C C EG+ L+ N C C
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPC 47
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 38.6 bits (90), Expect = 2e-05
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 23 CLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINEC 64
C+ + C C + G C C GY+L DG C E
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44
Score = 34.4 bits (79), Expect = 9e-04
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 64 CKENEGICEDGKCINIAGG-VTCECPEGFMLSPNGMKCIDVRQDVC 108
C G CE C + G +C C EG+ L +G+ C + C
Sbjct: 2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 46
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 36.8 bits (85), Expect = 1e-04
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 62 NECKENEGICE-----DGKCINIAGGVTCECPEGFMLSPNGMKCI 101
+ G C+ + + TC CP+G +L+ + C+
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49
Score = 36.8 bits (85), Expect = 1e-04
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 21 NECLELSNQCAFRCHNVP------GSFRCICPYGYALAPDGRHCI 59
+ C + C P F C CP G LA D R C+
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 33.0 bits (75), Expect = 0.003
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 57 HCIDINECKE----NEGICEDGKCINIAGGVTCECPEGFM 92
H + E ++ N G C K ++ C+C GF
Sbjct: 2 HLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT 41
Score = 23.8 bits (51), Expect = 5.9
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 14/63 (22%)
Query: 19 DINECLELSNQC-------AFRCHNVPGSFRCICPYGYALAPDGRHC-IDINECKENEGI 70
E C + + P + C C G+ G C ++ +N+
Sbjct: 5 KCAEKE--KTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQNQEK 58
Query: 71 CED 73
E+
Sbjct: 59 AEE 61
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 31.7 bits (72), Expect = 0.005
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 23 CLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHCID 60
C +QC+ C + F C C Y +GR C+
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCVA 39
Score = 28.7 bits (64), Expect = 0.060
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 64 CKENEGIC-EDGKCINIAGGVTCECPEGFMLSPNGMKCID 102
C N C +C + A G C C + + NG +C+
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCVA 39
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 31.6 bits (72), Expect = 0.006
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 8/42 (19%)
Query: 19 DINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
D ++C SN C C + S+ C CP+G+ G++C
Sbjct: 2 DGDQCE--SNPCLNGGSCKDDINSYECWCPFGFE----GKNC 37
Score = 30.8 bits (70), Expect = 0.010
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 59 IDINECKENEGICE-DGKCINIAGGVTCECPEGF 91
+D ++C+ N C G C + C CP GF
Sbjct: 1 VDGDQCESNP--CLNGGSCKDDINSYECWCPFGF 32
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 31.6 bits (72), Expect = 0.006
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Query: 19 DINECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
D ++C S+ C C + S+ C C + GR+C
Sbjct: 1 DGDQCA--SSPCQNGGSCKDQLQSYICFCLPAFE----GRNC 36
Score = 28.9 bits (65), Expect = 0.052
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 60 DINECKENEGICE-DGKCINIAGGVTCECPEGF 91
D ++C + C+ G C + C C F
Sbjct: 1 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAF 31
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 29.6 bits (67), Expect = 0.033
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Query: 20 INECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
+NEC+ SN C C + G F+CIC GY G HC
Sbjct: 1 VNECV--SNPCQNDATCLDQIGEFQCICMPGYE----GVHC 35
Score = 27.0 bits (60), Expect = 0.24
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 61 INECKENEGICE-DGKCINIAGGVTCECPEGF 91
+NEC N C+ D C++ G C C G+
Sbjct: 1 VNECVSNP--CQNDATCLDQIGEFQCICMPGY 30
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 29.4 bits (66), Expect = 0.046
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 60 DINECKENEGICEDGKCINIAGGVTCECPEGF 91
+ C C G CI+ G +C+C G+
Sbjct: 7 LEHPCASLC--CGHGTCIDGIGSFSCDCRSGW 36
Score = 25.9 bits (57), Expect = 0.76
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 7/41 (17%)
Query: 19 DINECLELSNQCAF-RCHNVPGSFRCICPYGYALAPDGRHC 58
+ C S C C + GSF C C G+ GR C
Sbjct: 7 LEHPCA--SLCCGHGTCIDGIGSFSCDCRSGWE----GRFC 41
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 28.7 bits (64), Expect = 0.066
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 62 NECKENEGICEDGKCINIAGGVTCECPEGFMLSP 95
+EC C +G C N+ GG C C EGF P
Sbjct: 2 DECSVGN-PCGNGTCKNVIGGFECTCEEGFEPGP 34
Score = 24.5 bits (53), Expect = 2.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 34 CHNVPGSFRCICPYGYALAP 53
C NV G F C C G+ P
Sbjct: 15 CKNVIGGFECTCEEGFEPGP 34
>d2h9ec1 g.22.1.1 (C:6-83) Anticoagulant protein {Dog hookworm
(Ancylostoma caninum) [TaxId: 29170]}
Length = 78
Score = 28.8 bits (64), Expect = 0.15
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 16 TCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 64
C+ E + C C+C G+ D + C+ +C
Sbjct: 18 KCKYDGVEEEDDEEPNVPCLVRVCHQDCVCEEGFYRNKDDK-CVSAEDC 65
Score = 23.8 bits (51), Expect = 9.5
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 58 CIDINECKENEGICEDGKCINIAGGVTCECPEGFMLSPNGMKCIDVRQDVCY 109
C +E++ + + C C EGF + + KC+
Sbjct: 19 CKYDGVEEEDDEEPNVPCLVRVCHQ-DCVCEEGFYRNKDD-KCVSAEDCELD 68
>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 43
Score = 27.5 bits (61), Expect = 0.22
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 28 NQCAFRCHNV-PGSFRCICPYGYALAPDGRH 57
C ++C + S+ C+C G+A P H
Sbjct: 10 ANCEYQCQPLDQTSYLCVCAEGFAPIPHEPH 40
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.0 bits (60), Expect = 0.28
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 8/40 (20%)
Query: 21 NECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
++C ++ C +C + G + C C G+ G++C
Sbjct: 1 DQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNC 34
Score = 25.4 bits (56), Expect = 1.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 62 NECKENEGICE-DGKCINIAGGVTCECPEGFMLSPNGMKC-IDVR 104
++C+ + C+ GKC + G TC C EGF G C + R
Sbjct: 1 DQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTR 39
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 26.6 bits (59), Expect = 0.33
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
Query: 21 NECLELSNQCAF--RCHNVPGSFRCICPYGYALAPDGRHC 58
+EC S+ C RC + F+C CP G+ G C
Sbjct: 1 DECA--SSPCLHNGRCLDKINEFQCECPTGFT----GHLC 34
Score = 24.6 bits (54), Expect = 1.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 62 NECKENEGICE-DGKCINIAGGVTCECPEGF 91
+EC + C +G+C++ CECP GF
Sbjct: 1 DECASSP--CLHNGRCLDKINEFQCECPTGF 29
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max)
[TaxId: 3847]}
Length = 250
Score = 28.9 bits (64), Expect = 0.42
Identities = 23/153 (15%), Positives = 38/153 (24%), Gaps = 11/153 (7%)
Query: 79 IAGGVTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKECCCSMG--- 135
G E + NG+ + + + + G
Sbjct: 55 GPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFPILSYADF--YQLAGVVAVEVTGGPE 112
Query: 136 --QAWGRYCLPCPSPNSGEP-ATFWSHYPKGFFFVLFFL--VIFWSILPIYKTIKDITIL 190
GR P P P P AT S + + F L ++ +
Sbjct: 113 VPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKER 172
Query: 191 SVCAYNMKQTTLHYTNFFFLNFLFDALLEHLMK 223
S L + N +F L E L++
Sbjct: 173 SGFEGPWTSNPLIFDNSYFTE-LLSGEKEGLLQ 204
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White
mustard (Sinapis alba) [TaxId: 3728]}
Length = 499
Score = 28.6 bits (63), Expect = 0.66
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 136 QAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILPIYKT 183
A G Y P + + +YPKG + V+ + + IY T
Sbjct: 359 NASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVT 406
>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 24.7 bits (53), Expect = 2.6
Identities = 5/36 (13%), Positives = 12/36 (33%)
Query: 83 VTCECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCT 118
V +C +G+ P ++ + + C
Sbjct: 26 VDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACY 61
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.3 bits (57), Expect = 2.9
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 85 CECPEGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQ 123
C+ G LS + C D+ V + + L +
Sbjct: 2 CDGRGGLKLSQDMDTCEDILPCVPFSVAKSVKSLYLGRM 40
Score = 25.2 bits (54), Expect = 6.7
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 43 CICPYGYALAPDGRHCIDINEC 64
C G L+ D C DI C
Sbjct: 2 CDGRGGLKLSQDMDTCEDILPC 23
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum
bicolor [TaxId: 4558]}
Length = 484
Score = 26.7 bits (58), Expect = 3.4
Identities = 20/159 (12%), Positives = 41/159 (25%), Gaps = 8/159 (5%)
Query: 33 RCHNVPGSFRCICPYGYALAPDGRHCIDINECKENEGICEDGKCINIAGG----VTCECP 88
+ H + + P +D + + C + G
Sbjct: 233 KYHKGADGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSA 292
Query: 89 EGFMLSPNGMKCIDVRQDVCYDSYQEGTCTLLRKQPITVKEC-CCSMGQAWGRYCLPCPS 147
+ + + T T + ++ + A+ P
Sbjct: 293 RDRVPYFKEKEQEKLVGSYDMIGINYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPD 352
Query: 148 PNSGEPATFWSH---YPKGFFFVLFFLVIFWSILPIYKT 183
N+ P T + YPKG +L + + P+Y T
Sbjct: 353 GNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYIT 391
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438
{Mycoplasma genitalium [TaxId: 2097]}
Length = 193
Score = 26.2 bits (56), Expect = 3.5
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 8/132 (6%)
Query: 122 KQPITVKECCCSMGQAWGRYCLPCPSPNSGEPATFWSHYPKGFFFVLFFLVIFWSILP-I 180
K +G + G L + G+ + + F S I
Sbjct: 56 KFNTFKNTISVIVGGSCGYVRLADKNFFCGQSNCTLNLLDPLELDLKFAYYALKSQQERI 115
Query: 181 YKTIKDITILSVCAYNMKQTTLHYTNF-----FFLNFL--FDALLEHLMKEIARLFVLAS 233
TI ++ ++K+ + +T+ N L FD LE+L I L
Sbjct: 116 EALAFGTTIQNIRISDLKELEIPFTSNKNEQHAIANTLSVFDERLENLASLIEINRKLRD 175
Query: 234 LFMQQTETDKQT 245
+ + + +
Sbjct: 176 EYAHKLFSLDEA 187
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 23.6 bits (51), Expect = 4.1
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 33 RCHNVPGSFRCICPYGYALAPDGRHC 58
C G++ C C G+ G C
Sbjct: 14 ECLETIGNYTCSCYPGFY----GPEC 35
Score = 22.8 bits (49), Expect = 7.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 74 GKCINIAGGVTCECPEGF 91
G+C+ G TC C GF
Sbjct: 13 GECLETIGNYTCSCYPGF 30
>d1h5wa_ e.27.1.1 (A:) Upper collar protein gp10 (connector protein)
{Bacteriophage phi-29 [TaxId: 10756]}
Length = 268
Score = 26.0 bits (57), Expect = 4.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 2 STTMSVTGYRLRVETCEDINECLELSNQCAFR 33
+ + R E CE INE L+ + FR
Sbjct: 234 IESSGTVFLKSREEACEKINELYGLNVKVKFR 265
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 23.2 bits (50), Expect = 5.3
Identities = 6/26 (23%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 33 RCHNVPGSFRCICPYGYALAPDGRHC 58
C ++ C C G++ G C
Sbjct: 14 ECVETINNYTCKCDPGFS----GLKC 35
Score = 22.8 bits (49), Expect = 8.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 74 GKCINIAGGVTCECPEGF 91
G+C+ TC+C GF
Sbjct: 13 GECVETINNYTCKCDPGF 30
>d1bx7a_ g.3.15.1 (A:) Hirustasin {Medicinal leech (Hirudo
medicinalis) [TaxId: 6421]}
Length = 51
Score = 23.8 bits (51), Expect = 5.7
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 70 ICEDGKCINIAGGVTCECPEGFMLSPNG 97
+C GKC+ C G NG
Sbjct: 14 VCLKGKCVCNEVHCRIRCKYGLKKDENG 41
>d1ejab_ g.3.15.1 (B:) Bdellastasin {Medicinal leech (Hirudo
medicinalis) [TaxId: 6421]}
Length = 53
Score = 23.8 bits (51), Expect = 5.9
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 70 ICEDGKCINIAGGVTCECPEGFMLSPNG 97
+CE KC+ +C GF NG
Sbjct: 14 MCEVDKCVCSDLHCKVKCEHGFKKDDNG 41
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.328 0.141 0.478
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 992,565
Number of extensions: 51152
Number of successful extensions: 374
Number of sequences better than 10.0: 1
Number of HSP's gapped: 345
Number of HSP's successfully gapped: 124
Length of query: 245
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 162
Effective length of database: 1,268,006
Effective search space: 205416972
Effective search space used: 205416972
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.1 bits)