Query psy11799
Match_columns 483
No_of_seqs 326 out of 2758
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 19:18:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11799.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11799hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.8 1.2E-18 4.2E-23 148.2 11.6 124 311-479 2-132 (135)
2 1z1y_A Ookinete surface protei 99.7 7.7E-19 2.6E-23 158.1 6.7 141 286-464 16-175 (186)
3 2vj3_A Neurogenic locus notch 99.7 9.4E-18 3.2E-22 142.7 12.8 127 123-284 2-131 (135)
4 4fbr_A Lectin, myxobacterial h 99.7 1.2E-21 4E-26 181.7 -12.8 225 139-460 40-265 (267)
5 1z1y_A Ookinete surface protei 99.7 1.6E-18 5.3E-23 156.1 7.0 148 138-310 12-176 (186)
6 1uzk_A Fibrillin-1; glycoprote 99.7 9E-18 3.1E-22 147.6 3.5 146 190-361 2-162 (162)
7 1uzk_A Fibrillin-1; glycoprote 99.7 3.5E-17 1.2E-21 143.8 5.7 140 313-467 2-162 (162)
8 4fbr_A Lectin, myxobacterial h 99.7 4.2E-20 1.4E-24 171.3 -14.6 244 22-354 4-265 (267)
9 2bou_A EGF-like module contain 99.6 4E-16 1.4E-20 134.1 10.2 122 333-473 12-143 (143)
10 4d90_A EGF-like repeat and dis 99.6 1.1E-15 3.7E-20 131.4 9.4 110 315-468 1-133 (143)
11 2bou_A EGF-like module contain 99.6 1.7E-15 5.8E-20 130.1 8.9 116 139-277 9-142 (143)
12 4d90_A EGF-like repeat and dis 99.6 2.8E-15 9.7E-20 128.8 10.3 112 139-264 8-129 (143)
13 1yo8_A Thrombospondin-2; EGF, 99.6 5.1E-15 1.7E-19 154.3 11.5 142 313-479 2-161 (634)
14 2vj2_A Jagged-1; signalling, p 99.5 3.4E-15 1.2E-19 131.8 5.6 150 250-467 14-168 (169)
15 1dx5_I Thrombomodulin; serine 99.5 2.9E-15 9.9E-20 123.9 4.0 114 312-466 2-118 (118)
16 1yo8_A Thrombospondin-2; EGF, 99.5 5.3E-14 1.8E-18 146.6 14.2 144 125-301 2-176 (634)
17 2w86_A Fibrillin-1, fibrillin1 99.5 4.6E-15 1.6E-19 128.0 3.2 123 312-467 2-147 (147)
18 2vj2_A Jagged-1; signalling, p 99.5 6.1E-15 2.1E-19 130.1 2.7 146 22-263 8-164 (169)
19 1dx5_I Thrombomodulin; serine 99.5 5.6E-14 1.9E-18 116.1 5.8 109 231-356 3-113 (118)
20 2ygq_A WIF-1, WNT inhibitory f 99.5 7.5E-14 2.6E-18 135.9 7.6 156 238-468 153-308 (324)
21 2w86_A Fibrillin-1, fibrillin1 99.4 8E-14 2.7E-18 120.2 3.8 118 231-360 3-146 (147)
22 2ygq_A WIF-1, WNT inhibitory f 99.4 2.7E-13 9.3E-18 131.9 6.9 154 139-362 155-308 (324)
23 1tpg_A T-plasminogen activator 99.3 1.3E-12 4.5E-17 102.3 5.3 85 342-471 1-90 (91)
24 1x7a_L Coagulation factor IX, 99.3 2.6E-12 8.9E-17 110.1 5.6 91 116-234 38-129 (146)
25 3fcs_B Integrin beta-3; beta p 99.2 9.2E-12 3.1E-16 131.8 9.1 168 234-467 436-627 (690)
26 1lmj_A Fibrillin 1; EGF, calci 99.2 1E-11 3.5E-16 96.3 6.7 82 125-229 2-85 (86)
27 1emn_A Fibrillin; extracellula 99.2 1.3E-11 4.5E-16 94.7 6.7 76 123-225 2-78 (82)
28 1aut_L Activated protein C; se 99.2 1.5E-11 5E-16 100.9 6.4 100 123-248 3-108 (114)
29 1z6c_A Vitamin K-dependent pro 99.2 6.2E-12 2.1E-16 97.7 3.7 83 125-232 2-86 (87)
30 1lmj_A Fibrillin 1; EGF, calci 99.2 1.9E-11 6.4E-16 94.8 6.1 79 190-268 2-83 (86)
31 1nfu_B Coagulation factor XA, 99.2 9.7E-12 3.3E-16 111.0 4.3 92 115-233 31-123 (195)
32 2vh0_B Activated factor XA lig 99.2 9.9E-12 3.4E-16 105.0 3.4 92 115-233 31-123 (134)
33 1emn_A Fibrillin; extracellula 99.2 5.4E-11 1.8E-15 91.3 7.1 73 311-396 2-77 (82)
34 3fcs_B Integrin beta-3; beta p 99.2 6E-11 2.1E-15 125.5 10.0 141 276-468 436-600 (690)
35 2gy5_A Angiopoietin-1 receptor 99.2 5E-11 1.7E-15 120.0 8.9 127 293-469 184-321 (423)
36 2c4f_L Coagulation factor VII 99.1 5.7E-11 1.9E-15 101.4 7.0 93 117-234 38-132 (142)
37 1z6c_A Vitamin K-dependent pro 99.1 3.1E-11 1E-15 93.8 4.3 82 190-274 2-86 (87)
38 1x7a_L Coagulation factor IX, 99.1 1.7E-10 5.9E-15 98.7 6.6 84 188-276 45-129 (146)
39 2w2n_E LDL receptor, low-densi 99.1 7.5E-11 2.5E-15 95.2 3.9 87 116-229 20-106 (107)
40 1tpg_A T-plasminogen activator 99.0 2E-10 6.8E-15 89.8 6.0 82 252-363 1-87 (91)
41 1aut_L Activated protein C; se 99.0 1E-09 3.4E-14 89.9 7.0 95 229-339 3-109 (114)
42 4aqs_A Laminin subunit beta-1; 98.9 4.1E-10 1.4E-14 117.4 3.6 99 342-467 417-524 (525)
43 2gy5_A Angiopoietin-1 receptor 98.9 3.3E-09 1.1E-13 106.7 9.8 126 203-395 209-346 (423)
44 2w2n_E LDL receptor, low-densi 98.9 4.7E-10 1.6E-14 90.5 2.9 76 190-268 28-104 (107)
45 3m0c_C LDL receptor, low-densi 98.9 2.2E-09 7.6E-14 116.6 8.0 84 191-277 312-395 (791)
46 2c4f_L Coagulation factor VII 98.9 4.6E-09 1.6E-13 89.4 8.0 84 188-276 44-132 (142)
47 2vh0_B Activated factor XA lig 98.9 9E-10 3.1E-14 92.8 3.2 83 188-275 39-123 (134)
48 1n7d_A LDL receptor, low-densi 98.8 7.9E-09 2.7E-13 111.4 9.7 138 203-362 225-373 (699)
49 1nfu_B Coagulation factor XA, 98.8 1.4E-09 4.7E-14 97.0 3.2 82 188-274 39-122 (195)
50 3k6s_B Integrin beta-2; cell r 98.8 6.6E-09 2.3E-13 109.7 6.5 136 294-481 446-603 (687)
51 4aqs_A Laminin subunit beta-1; 98.8 5.3E-09 1.8E-13 108.9 5.7 57 16-72 235-294 (525)
52 3h5c_B Vitamin K-dependent pro 98.7 1.8E-08 6.2E-13 98.0 6.5 80 366-473 7-89 (317)
53 3v65_B Low-density lipoprotein 98.6 7.9E-09 2.7E-13 103.5 2.9 84 190-275 2-85 (386)
54 1n7d_A LDL receptor, low-densi 98.6 7.1E-08 2.4E-12 104.0 9.4 82 190-274 293-374 (699)
55 3p5b_L Low density lipoprotein 98.6 3.8E-08 1.3E-12 99.0 6.7 80 192-274 1-80 (400)
56 3k6s_B Integrin beta-2; cell r 98.6 3.9E-08 1.3E-12 103.9 6.5 130 236-396 433-589 (687)
57 3m0c_C LDL receptor, low-densi 98.6 7E-08 2.4E-12 104.9 8.7 109 203-317 284-395 (791)
58 3v65_B Low-density lipoprotein 98.5 2E-08 6.9E-13 100.5 2.7 84 125-233 2-85 (386)
59 3h5c_B Vitamin K-dependent pro 98.5 1.1E-07 3.8E-12 92.4 6.4 82 190-278 4-89 (317)
60 3p5b_L Low density lipoprotein 98.5 1.8E-07 6.2E-12 94.0 7.2 79 233-314 1-80 (400)
61 1edm_B Factor IX; epidermal gr 98.3 8E-07 2.7E-11 57.2 4.1 37 422-467 2-38 (39)
62 2k2s_B Micronemal protein 6; m 98.2 3.8E-07 1.3E-11 64.6 1.4 45 420-473 8-55 (61)
63 2jkh_L Factor X light chain; p 98.1 1.4E-06 4.9E-11 60.7 3.2 45 192-236 2-46 (55)
64 3u7u_G Neuregulin 1; signaling 98.1 1.4E-06 4.8E-11 60.3 3.0 39 421-468 6-49 (55)
65 2jkh_L Factor X light chain; p 98.1 1.9E-06 6.7E-11 60.0 2.8 38 435-474 10-47 (55)
66 3u7u_G Neuregulin 1; signaling 98.0 2.7E-06 9.4E-11 58.8 3.4 41 121-170 2-48 (55)
67 1kli_L Factor VIIA; extrinsic 98.0 2.9E-06 1E-10 61.9 3.5 48 189-236 3-51 (69)
68 1klo_A Laminin; glycoprotein; 98.0 4.8E-06 1.6E-10 72.2 5.0 108 333-467 6-145 (162)
69 1edm_B Factor IX; epidermal gr 98.0 7.7E-06 2.6E-10 52.5 4.3 37 313-361 2-38 (39)
70 1klo_A Laminin; glycoprotein; 97.8 1.5E-05 5.2E-10 69.0 5.4 29 138-170 2-33 (162)
71 1egf_A Epidermal growth factor 97.8 2E-05 7E-10 54.2 4.7 41 422-468 2-44 (53)
72 1kli_L Factor VIIA; extrinsic 97.8 1.2E-05 4.1E-10 58.6 3.2 48 421-473 3-51 (69)
73 2k2s_B Micronemal protein 6; m 97.8 1E-05 3.5E-10 57.2 2.6 40 119-163 4-46 (61)
74 1kig_L Factor XA; glycoprotein 97.8 8.8E-06 3E-10 55.6 2.1 38 198-235 5-42 (51)
75 2bz6_L Blood coagulation facto 97.8 1.6E-05 5.6E-10 54.7 3.2 40 197-236 5-45 (53)
76 1apq_A Complement protease C1R 97.7 2.2E-05 7.7E-10 54.0 3.8 46 421-468 2-52 (53)
77 1hae_A Heregulin-alpha; growth 97.7 1.8E-05 6.1E-10 56.8 3.2 42 424-474 7-54 (63)
78 2p28_B Integrin beta-2; hybrid 97.7 2.6E-05 8.7E-10 70.7 4.7 97 333-467 101-213 (217)
79 2kl7_A Fibulin-4; secreted, ca 97.7 3.7E-05 1.3E-09 56.4 4.0 42 422-466 2-44 (71)
80 1apq_A Complement protease C1R 97.6 5.6E-05 1.9E-09 52.0 4.5 41 190-230 3-51 (53)
81 1k36_A Epiregulin; EGF-like fo 97.6 3.3E-05 1.1E-09 51.3 3.0 40 422-468 2-43 (46)
82 1kig_L Factor XA; glycoprotein 97.6 2.2E-05 7.6E-10 53.5 1.9 37 435-473 7-43 (51)
83 3ca7_A Protein spitz; argos, E 97.6 8.5E-06 2.9E-10 55.9 -0.3 30 435-468 15-48 (52)
84 1egf_A Epidermal growth factor 97.5 0.0001 3.6E-09 50.6 4.3 39 313-363 2-45 (53)
85 2bz6_L Blood coagulation facto 97.5 5.4E-05 1.8E-09 52.0 2.7 37 435-473 8-45 (53)
86 1a3p_A Epidermal growth factor 97.5 6.8E-05 2.3E-09 49.6 3.1 29 435-467 10-40 (45)
87 2wph_E Coagulation factor IXA 97.4 0.00017 5.8E-09 50.7 4.4 37 197-233 5-42 (59)
88 2p28_B Integrin beta-2; hybrid 97.4 7.8E-05 2.7E-09 67.5 3.2 86 294-396 107-211 (217)
89 2wg3_C Hedgehog-interacting pr 97.3 3.3E-05 1.1E-09 78.7 0.3 80 344-470 378-457 (463)
90 2kl7_A Fibulin-4; secreted, ca 97.3 0.0002 6.7E-09 52.5 3.8 40 125-167 2-42 (71)
91 1a3p_A Epidermal growth factor 97.2 0.00022 7.6E-09 47.1 3.5 35 316-362 2-41 (45)
92 1gl4_A Nidogen-1, entactin; im 97.2 7.1E-05 2.4E-09 69.8 1.2 46 421-471 3-48 (285)
93 1k36_A Epiregulin; EGF-like fo 97.2 0.0002 7E-09 47.4 3.2 39 125-170 2-42 (46)
94 1nql_B Epidermal growth factor 97.2 0.00012 4.1E-09 50.2 1.7 30 435-468 13-44 (53)
95 1gl4_A Nidogen-1, entactin; im 97.1 0.00014 4.9E-09 67.7 1.9 46 124-174 3-48 (285)
96 1hae_A Heregulin-alpha; growth 97.0 0.00021 7.2E-09 51.0 1.9 43 314-368 6-53 (63)
97 2wph_E Coagulation factor IXA 97.0 0.00067 2.3E-08 47.6 4.2 35 435-471 8-43 (59)
98 1nql_B Epidermal growth factor 96.7 0.00092 3.1E-08 45.7 2.8 30 137-170 12-43 (53)
99 1g1s_A P-selectin; selectin, l 96.7 0.00051 1.8E-08 59.2 1.8 35 435-473 126-160 (162)
100 3ltf_D Protein spitz; receptor 96.6 0.00054 1.8E-08 47.9 1.0 30 435-468 15-48 (58)
101 3ca7_A Protein spitz; argos, E 96.6 0.00099 3.4E-08 45.4 2.3 29 138-170 15-47 (52)
102 3zyj_B Netrin-G1; cell adhesio 96.5 0.00093 3.2E-08 66.1 2.8 37 435-479 372-408 (426)
103 2wg3_C Hedgehog-interacting pr 96.4 0.00062 2.1E-08 69.3 0.4 77 113-232 380-456 (463)
104 1n1i_A Merozoite surface prote 96.1 0.0087 3E-07 46.2 5.5 63 139-221 18-84 (105)
105 1ob1_C Major merozoite surface 96.0 0.0053 1.8E-07 47.1 3.9 64 139-221 12-83 (99)
106 3ltf_D Protein spitz; receptor 96.0 0.0022 7.5E-08 44.7 1.6 29 138-170 15-47 (58)
107 1szb_A Mannose binding lectin- 95.7 0.0066 2.3E-07 52.6 3.9 43 190-232 123-168 (170)
108 2fd6_A Urokinase-type plasmino 95.7 0.011 3.8E-07 48.2 4.8 29 138-170 2-33 (122)
109 1szb_A Mannose binding lectin- 95.7 0.0058 2E-07 53.0 3.2 48 420-469 121-168 (170)
110 3zyj_B Netrin-G1; cell adhesio 95.6 0.0044 1.5E-07 61.3 2.3 84 291-396 310-395 (426)
111 1g1s_A P-selectin; selectin, l 95.6 0.0038 1.3E-07 53.6 1.6 34 139-176 127-160 (162)
112 1ob1_C Major merozoite surface 95.0 0.03 1E-06 42.9 4.8 69 367-457 7-82 (99)
113 3cfw_A L-selectin; EGF, cell a 94.9 0.013 4.3E-07 50.4 3.0 35 435-473 126-160 (164)
114 1n1i_A Merozoite surface prote 94.2 0.14 4.7E-06 39.5 6.9 78 366-467 12-94 (105)
115 3v64_C Agrin; beta propeller, 93.8 0.027 9.2E-07 54.8 2.8 42 191-233 1-42 (349)
116 3f1s_B Vitamin K-dependent pro 93.8 0.027 9.1E-07 53.1 2.7 46 191-236 2-48 (283)
117 1nzi_A Complement C1S componen 93.6 0.055 1.9E-06 46.0 4.1 42 190-231 116-158 (159)
118 2fd6_A Urokinase-type plasmino 93.3 0.049 1.7E-06 44.2 3.2 29 435-467 2-33 (122)
119 3e50_C Protransforming growth 93.1 0.071 2.4E-06 35.6 3.1 31 435-470 15-47 (50)
120 1q4g_A Prostaglandin G/H synth 93.0 0.064 2.2E-06 55.4 4.1 36 126-170 2-39 (553)
121 1iox_A Betacellulin; EGF-like 92.9 0.044 1.5E-06 36.7 1.9 29 435-468 15-45 (50)
122 1nzi_A Complement C1S componen 92.4 0.11 3.7E-06 44.1 4.3 44 123-170 114-157 (159)
123 1q4g_A Prostaglandin G/H synth 92.0 0.063 2.1E-06 55.5 2.5 37 314-362 2-40 (553)
124 3nt1_A Prostaglandin-endoperox 91.6 0.1 3.5E-06 54.0 3.6 36 126-170 1-38 (587)
125 2i9a_A Urokinase-type plasmino 91.3 0.22 7.5E-06 41.7 4.7 28 139-170 15-45 (145)
126 3cfw_A L-selectin; EGF, cell a 91.1 0.11 3.8E-06 44.3 2.8 33 139-175 127-159 (164)
127 3nt1_A Prostaglandin-endoperox 90.8 0.12 3.9E-06 53.7 3.0 36 314-361 1-38 (587)
128 2rnl_A Amphiregulin; AR, color 90.5 0.22 7.7E-06 33.1 3.2 29 435-468 19-49 (50)
129 2rnl_A Amphiregulin; AR, color 89.7 0.4 1.4E-05 31.9 3.9 25 139-164 20-46 (50)
130 3e50_C Protransforming growth 89.6 0.29 1E-05 32.6 3.2 29 139-172 16-46 (50)
131 2ygo_A WIF-1, WNT inhibitory f 89.6 0.19 6.7E-06 43.4 3.0 27 435-468 154-180 (188)
132 3f1s_B Vitamin K-dependent pro 89.2 0.23 8E-06 46.5 3.5 47 232-279 2-49 (283)
133 1iox_A Betacellulin; EGF-like 89.0 0.26 8.8E-06 32.9 2.6 27 139-170 16-44 (50)
134 3v64_C Agrin; beta propeller, 87.7 0.27 9.4E-06 47.6 3.1 42 232-275 1-42 (349)
135 2i9a_A Urokinase-type plasmino 87.6 0.35 1.2E-05 40.4 3.2 29 435-467 14-45 (145)
136 1ijq_A LDL receptor, low-densi 87.4 0.45 1.5E-05 45.3 4.3 41 190-230 266-315 (316)
137 1xdt_R Hbegf, heparin-binding 87.4 0.2 6.9E-06 36.8 1.4 29 435-468 47-77 (79)
138 3sov_A LRP-6, low-density lipo 86.8 0.43 1.5E-05 45.5 3.8 43 191-233 267-311 (318)
139 1g1t_A E-selectin; EGF, adhesi 86.7 0.2 6.9E-06 42.2 1.3 29 435-467 126-154 (157)
140 2ygo_A WIF-1, WNT inhibitory f 86.6 0.36 1.2E-05 41.7 2.8 37 120-170 143-179 (188)
141 4aqt_A Laminin subunit gamma-1 85.3 0.49 1.7E-05 46.2 3.3 27 382-416 332-359 (375)
142 4a0p_A LRP6, LRP-6, low-densit 84.6 0.59 2E-05 49.2 3.8 42 190-231 264-306 (628)
143 3asi_A Neurexin-1-alpha; beta- 84.5 0.63 2.2E-05 46.1 3.8 36 424-468 186-222 (410)
144 1g1t_A E-selectin; EGF, adhesi 84.0 0.3 1E-05 41.1 1.1 36 315-362 120-155 (157)
145 3s94_A LRP-6, low-density lipo 82.8 0.7 2.4E-05 48.5 3.5 41 190-230 577-617 (619)
146 4aqt_A Laminin subunit gamma-1 82.6 0.37 1.3E-05 47.0 1.2 21 29-49 270-290 (375)
147 2y38_A Laminin subunit alpha-5 80.8 3.6 0.00012 40.3 7.5 38 382-427 355-393 (403)
148 3asi_A Neurexin-1-alpha; beta- 76.8 1.6 5.5E-05 43.1 3.7 37 314-362 185-222 (410)
149 1xdt_R Hbegf, heparin-binding 76.3 0.9 3.1E-05 33.3 1.2 25 334-362 51-77 (79)
150 3sov_A LRP-6, low-density lipo 72.8 2.9 9.9E-05 39.7 4.3 31 440-470 279-311 (318)
151 1ijq_A LDL receptor, low-densi 71.2 4.6 0.00016 38.0 5.3 27 335-361 283-315 (316)
152 1b9w_A Protein (merozoite surf 70.6 9 0.00031 28.7 5.4 64 139-221 12-79 (95)
153 4a0p_A LRP6, LRP-6, low-densit 70.1 3.1 0.00011 43.6 4.1 43 125-172 264-307 (628)
154 3qcw_A Neurexin-1-alpha; synap 67.9 2.9 0.0001 47.7 3.6 30 435-468 1024-1054(1245)
155 2e26_A Reelin, reeler protein; 67.3 1.7 5.8E-05 45.7 1.3 39 34-73 521-566 (725)
156 3qcw_A Neurexin-1-alpha; synap 64.7 4.2 0.00014 46.4 4.0 37 423-468 619-656 (1245)
157 3s94_A LRP-6, low-density lipo 64.6 4.3 0.00015 42.5 3.8 40 126-170 578-617 (619)
158 2y38_A Laminin subunit alpha-5 61.9 13 0.00043 36.4 6.3 26 383-416 285-310 (403)
159 3fl7_A Ephrin receptor; ATP-bi 61.4 4 0.00014 41.9 2.8 58 383-458 262-319 (536)
160 3fby_A COMP, cartilage oligome 61.0 4.4 0.00015 41.0 2.9 41 126-170 18-59 (551)
161 2p26_A Integrin beta-2; hybrid 57.7 5 0.00017 37.2 2.5 57 295-361 208-274 (280)
162 2e26_A Reelin, reeler protein; 53.7 3.4 0.00012 43.4 0.7 22 139-163 192-213 (725)
163 1b9w_A Protein (merozoite surf 51.5 45 0.0015 25.0 6.2 58 203-262 16-79 (95)
164 3ssb_I IMPI alpha, inducible m 49.8 11 0.00038 22.2 2.2 20 385-404 6-25 (32)
165 2p26_A Integrin beta-2; hybrid 46.1 7.3 0.00025 36.1 1.6 15 31-45 207-221 (280)
166 3fby_A COMP, cartilage oligome 44.4 12 0.00043 37.7 3.0 32 434-467 27-59 (551)
167 3dem_A Complement factor MAsp- 37.6 25 0.00086 32.2 3.9 31 200-230 133-163 (278)
168 3dem_A Complement factor MAsp- 35.9 19 0.00065 33.0 2.7 31 435-467 133-163 (278)
169 3fcn_A AN alpha-helical protei 34.0 8.7 0.0003 32.4 0.0 19 3-21 23-47 (164)
170 1ata_A Ascaris trypsin inhibit 31.5 74 0.0025 21.7 4.5 19 385-403 37-57 (62)
171 1nt0_A MAsp2, mannose-binding 28.8 36 0.0012 31.3 3.4 30 201-230 133-162 (286)
172 1ccv_A AMCI, chymotrypsin inhi 24.9 33 0.0011 22.9 1.7 18 386-403 36-53 (56)
173 3t5o_A Complement component C6 23.0 52 0.0018 36.0 3.7 30 435-468 504-533 (913)
174 1nt0_A MAsp2, mannose-binding 22.4 41 0.0014 30.9 2.4 31 435-467 132-162 (286)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.77 E-value=1.2e-18 Score=148.17 Aligned_cols=124 Identities=36% Similarity=0.863 Sum_probs=97.6
Q ss_pred cccCCcCC--CCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCccCCCCCCCC--cEECCCCCeeE
Q psy11799 311 CIDDNECA--RNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSSCLSSPCSFG--CTPLGISGFSC 386 (483)
Q Consensus 311 C~~~~~C~--~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~~~~C~~~--c~~~~~~~~~C 386 (483)
|+++++|+ .++|.+ +|+|++..++|+|.|++|| .|..|+...++|...+|.++ |+... ++|+|
T Consensus 2 c~dideC~~~~~~C~~--------~g~C~~~~g~~~C~C~~Gy----~G~~C~~~~~~C~~~~C~~~~~C~~~~-g~~~C 68 (135)
T 2vj3_A 2 AQDVDECSLGANPCEH--------AGKCINTLGSFECQCLQGY----TGPRCEIDVNECVSNPCQNDATCLDQI-GEFQC 68 (135)
T ss_dssp -CCCCTTTSSSCSSST--------TCEEEECSSSEEEECCTTE----ESTTSCEECCTTTTCCCCSSCEEEECS-SCEEE
T ss_pred CcccccccCCCCCCCC--------CCEeECCCCCEEEECCCCC----cCCcccccCccCCCCCCCCCCEEeCCC-CCcee
Confidence 56789998 478988 8999999999999999999 45678644448999999876 66666 88999
Q ss_pred eCCCCeeecCCcceecccCCCCCCCcccCCCCCcc-cccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCC
Q psy11799 387 ECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLG-DIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTF 465 (483)
Q Consensus 387 ~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~-~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~ 465 (483)
.|++||+|.. |+ ++++|... +|.++++|++..++|+|+|++|| .|..
T Consensus 69 ~C~~G~~G~~-----------------------C~~~~~~C~~~-----~C~~~g~C~~~~g~~~C~C~~G~----~G~~ 116 (135)
T 2vj3_A 69 ICMPGYEGVH-----------------------CEVNTDECASS-----PCLHNGRCLDKINEFQCECPTGF----TGHL 116 (135)
T ss_dssp ECCTTEESSS-----------------------SCEECCTTTTC-----CSTTTCEEEECSSCEEEECCTTE----ESSS
T ss_pred eCCCCCcCCc-----------------------ceecCCcccCC-----CcCCCCEeECCCCCeEEECCCCC----cCCc
Confidence 9999999865 54 67888754 89999999999999999999999 7889
Q ss_pred CC-CCcCCCCC-CCcc
Q psy11799 466 CL-DQDECTDD-SKCR 479 (483)
Q Consensus 466 C~-~~~~C~~~-~~C~ 479 (483)
|+ ++++|... +.|.
T Consensus 117 C~~~i~~C~~~~~~c~ 132 (135)
T 2vj3_A 117 CQVDLHHILDAQKMVW 132 (135)
T ss_dssp SCEECC----------
T ss_pred cCccCccccCCCccee
Confidence 96 78999854 4443
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.75 E-value=7.7e-19 Score=158.13 Aligned_cols=141 Identities=26% Similarity=0.662 Sum_probs=111.5
Q ss_pred ccc-cCCCCeeEeCCCCceeCCCCCccccCCcCC----CCCCCCCCCCCCCCCCEEeeCC-----CCeeEECCCCCeecc
Q psy11799 286 QIC-NLLGGYKCGCPEGYVRHPFSNECIDDNECA----RNPCEPSSNTTGERGGKCFNTA-----GSYRCGCPDGFQFEA 355 (483)
Q Consensus 286 ~~C-~~~g~~~C~C~~G~~g~~~~~~C~~~~~C~----~~~C~~~~~~~c~~~g~C~~~~-----g~~~C~C~~G~~~~~ 355 (483)
++| +..++|+|.|++||+|. ....|+++++|. .++|.+ +++|++.. ++|+|.|++||+|..
T Consensus 16 g~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~--------~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 16 GQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGE--------FGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp EEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEET--------TEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCC--------CCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 467 77789999999999997 235788999998 678887 89999999 899999999998843
Q ss_pred CCCceeeCCCccCCCCCCCC--cE----ECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccc--cccc
Q psy11799 356 ALQLCTQLSSSCLSSPCSFG--CT----PLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDI--DECK 427 (483)
Q Consensus 356 ~g~~C~~~~~~C~~~~C~~~--c~----~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~--~~C~ 427 (483)
..|+ ++ +|...||.++ |+ ... ++|+|.|++||+|... ....|.++ ++|.
T Consensus 87 --~~C~-~d-~C~~~~C~~~g~C~~~~~~~~-g~~~C~C~~Gy~g~~~------------------~~~~C~~~~~~~C~ 143 (186)
T 1z1y_A 87 --DTCV-LD-VCQYXNCGESGECIVEYLSEI-QSAGCSCAIGXVPNPE------------------DEXXCTXTGETACQ 143 (186)
T ss_dssp --TEEE-EG-GGTTCCCCTTEEEEEEEETTE-EEEEEEECTEEEEETT------------------TTTEEEEEECCCCC
T ss_pred --CCCC-CC-cCcCCCCCCCCEEeeCCcCCC-CCceEECCCCCcccCC------------------CCCcceEcCCCccc
Confidence 3676 33 8999999976 55 233 6899999999998420 00226654 7886
Q ss_pred cCCCCccCC-CCCCeEeeCCCCeeeeCCCCcccCCCCC
Q psy11799 428 EEINGVAVC-PKPGTCINTMGSFRCLCPRGFKLDRTGT 464 (483)
Q Consensus 428 ~~~~~~~~C-~~~g~C~~~~g~~~C~C~~G~~~~~~g~ 464 (483)
. +| .++++|+++.++|+|+|++||+|+....
T Consensus 144 ~------~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 144 L------XCNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp C------CCCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred c------cccccCcceecCCCCeeeECCCCCccCcccc
Confidence 3 89 8999999999999999999997665443
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.75 E-value=9.4e-18 Score=142.69 Aligned_cols=127 Identities=35% Similarity=0.817 Sum_probs=97.4
Q ss_pred cccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccc-cCCCCCCCCCccCCCccccccchhccCCCCC
Q psy11799 123 FLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL-DQDECTDDSKCREGCQTCEDINECLELSNQC 201 (483)
Q Consensus 123 C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~-~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C 201 (483)
|+|+|+|+.. .++ |.++|+|++..++|+|+|++||+ |..|+ ++++|. ..++..
T Consensus 2 c~dideC~~~-~~~--C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~~~~~~C~-------------------~~~C~~ 55 (135)
T 2vj3_A 2 AQDVDECSLG-ANP--CEHAGKCINTLGSFECQCLQGYT----GPRCEIDVNECV-------------------SNPCQN 55 (135)
T ss_dssp -CCCCTTTSS-SCS--SSTTCEEEECSSSEEEECCTTEE----STTSCEECCTTT-------------------TCCCCS
T ss_pred CcccccccCC-CCC--CCCCCEeECCCCCEEEECCCCCc----CCcccccCccCC-------------------CCCCCC
Confidence 5689999853 333 99999999999999999999999 55564 444443 334444
Q ss_pred CCeEEeCCCCeEEeCCCCceeCCCCCccc-ccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCcc-ccCccccC
Q psy11799 202 AFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTC-LDSDECAT 279 (483)
Q Consensus 202 ~~~C~~~~gs~~C~C~~G~~~~~~g~~C~-~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C-~~~~~C~~ 279 (483)
.++|++..++|+|.|++||+ |..|+ ++++|...+|..+++|++..++|+|.|++||+ +. .| .++++|..
T Consensus 56 ~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~----G~-~C~~~i~~C~~ 126 (135)
T 2vj3_A 56 DATCLDQIGEFQCICMPGYE----GVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFT----GH-LCQVDLHHILD 126 (135)
T ss_dssp SCEEEECSSCEEEECCTTEE----SSSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEE----SS-SSCEECC----
T ss_pred CCEEeCCCCCceeeCCCCCc----CCcceecCCcccCCCcCCCCEeECCCCCeEEECCCCCc----CC-ccCccCccccC
Confidence 48999999999999999999 99995 78999999999999999999999999999999 55 56 47888887
Q ss_pred CCCcc
Q psy11799 280 GRHIC 284 (483)
Q Consensus 280 ~~~~c 284 (483)
.++.+
T Consensus 127 ~~~~c 131 (135)
T 2vj3_A 127 AQKMV 131 (135)
T ss_dssp -----
T ss_pred CCcce
Confidence 65544
No 4
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.75 E-value=1.2e-21 Score=181.67 Aligned_cols=225 Identities=11% Similarity=0.005 Sum_probs=146.5
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCCCeEEeCCCCeEEeCCC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFRCHNVPGSFRCICPY 218 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~ 218 (483)
|.++|+|++..++|+|.|++||+|. .|+ .++++|.....--...|++. .+|
T Consensus 40 c~ngG~C~~g~~~y~C~Cp~Gf~G~----~Ce------------------~ni~ec~~~~~c~s~pC~ng---gtc---- 90 (267)
T 4fbr_A 40 SDDGGKTLKGTMTYNGEGPIGFRGT----LSS------------------ANNYTVENQWGGTSAPWQPG---GVW---- 90 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEEEE----ECS------------------TTEEEEEEESSSTTSCEEEE---EEE----
T ss_pred cCCCCeecCCCCCeEEeCCCCcccc----ccc------------------ccccccccccCcCCCcccCC---Cee----
Confidence 8899999999999999999999954 554 12333222111111334442 133
Q ss_pred CceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccCCCCcccccccCCCCeeEeC
Q psy11799 219 GYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQICNLLGGYKCGC 298 (483)
Q Consensus 219 G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C~~~g~~~C~C 298 (483)
|. |.+|...++|.+.|+.++++|++...+|+|+|++||++.... .++++|+....--...|. .+
T Consensus 91 -~~----G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce----~~~d~C~n~~~c~s~pC~-------ng 154 (267)
T 4fbr_A 91 -VL----GARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTD----GDTYSVENQWGGSAAPWH-------SG 154 (267)
T ss_dssp -EC----CCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECC----CCEEEEEEECSSTTSCCE-------EE
T ss_pred -ec----cCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCC----CCcccccccCCcCCcccc-------CC
Confidence 33 778887889999999999999999999999999999954322 234554432110011110 01
Q ss_pred CCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCccCCCC-CCCCcE
Q psy11799 299 PEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSSCLSSP-CSFGCT 377 (483)
Q Consensus 299 ~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~~~~-C~~~c~ 377 (483)
...|.|..++ ....|...+|.+ +|+|++..++|+|.|++|| .+++|+..+++|+..+ |.....
T Consensus 155 g~c~~G~~c~----~~i~c~~~~c~n--------gg~C~dg~~~y~C~Cp~Gf----~G~~c~~~i~ec~~~~~c~~~~c 218 (267)
T 4fbr_A 155 GVWVLGTRGK----QNVINVDAKSND--------GGKTLSGTMTYNGEGPIGF----RGTLTSPDTYTVENQWGGSTAPW 218 (267)
T ss_dssp EEEECCSSTT----SCEEEEEEECSS--------TTSEEEEEEEETTSCCEEE----EEEEEETTEEEEEEECSCTTSCC
T ss_pred cceecccccc----cccccCCCCCCC--------CCEeeCCCCCeEEeCCCCc----cccccccccceeccCCCccCCcc
Confidence 1223344433 223455568888 9999999999999999999 4567887765544222 222211
Q ss_pred ECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCc
Q psy11799 378 PLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGF 457 (483)
Q Consensus 378 ~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~ 457 (483)
... +.+.+.|+.++.+.. |.. +|.++|+|++...+|+|.||+||
T Consensus 219 ~~g-G~~~~~C~~g~n~~~-----------------------------c~~------~c~ngGtC~dg~~sy~CeCp~GF 262 (267)
T 4fbr_A 219 NPG-GFWMIGARNGQNVVA-----------------------------LNV------ASSDGGKTLAGTMIYNGEGPIGF 262 (267)
T ss_dssp EEE-EEEECCCCTTCCEEE-----------------------------EEE------ECSSTTSEEEEEEEETTSCCEEE
T ss_pred cCC-CeEEEecCCCCcccc-----------------------------CCc------CCCCCCEeeCCCcceeecCCCCc
Confidence 122 445666777765432 322 78999999999999999999999
Q ss_pred ccC
Q psy11799 458 KLD 460 (483)
Q Consensus 458 ~~~ 460 (483)
+|.
T Consensus 263 ~G~ 265 (267)
T 4fbr_A 263 RAR 265 (267)
T ss_dssp EEE
T ss_pred ccc
Confidence 653
No 5
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.74 E-value=1.6e-18 Score=156.13 Aligned_cols=148 Identities=25% Similarity=0.595 Sum_probs=115.1
Q ss_pred CCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCC---CCCccCCCccccccchhccCCCCCCCeEEeCC-----
Q psy11799 138 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTD---DSKCREGCQTCEDINECLELSNQCAFRCHNVP----- 209 (483)
Q Consensus 138 ~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~---~~~C~~g~~~C~~~~~C~~~~~~C~~~C~~~~----- 209 (483)
||. +|+|++..++|+|.|++||+|. .+..|+++++|.. ..+|.++ ++|++..
T Consensus 12 pC~-ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~------------------~~C~~~~~~~~~ 71 (186)
T 1z1y_A 12 ICX-NGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEF------------------GQCIENPDPAQV 71 (186)
T ss_dssp CCB-TEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETT------------------EEEEECSSTTSS
T ss_pred CCC-CCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCC------------------CEeecCCCCcCC
Confidence 396 5699999999999999999976 3557877777663 1123222 7899998
Q ss_pred CCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeee----eCCCCceEeCCCCceecC-CCCCccccC--ccccCCCC
Q psy11799 210 GSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCT----NTEGSYTCGCHPGFELSS-DGSGTCLDS--DECATGRH 282 (483)
Q Consensus 210 gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~----~~~g~~~C~C~~G~~~~~-~g~~~C~~~--~~C~~~~~ 282 (483)
++|+|.|++||++. +..|+ +++|...+|..+++|+ ++.++|+|.|++||++.. .+. .|+++ ++|.. +.
T Consensus 72 g~y~C~C~~G~~g~--~~~C~-~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~-~C~~~~~~~C~~-~C 146 (186)
T 1z1y_A 72 NMYXCGCIEGYTLX--EDTCV-LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEX-XCTXTGETACQL-XC 146 (186)
T ss_dssp CSEEEEECTTEEEE--TTEEE-EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTT-EEEEEECCCCCC-CC
T ss_pred CCEECCCCCCCccC--CCCCC-CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCC-cceEcCCCcccc-cc
Confidence 89999999999943 22566 7899999998899998 777899999999999854 344 78865 78873 22
Q ss_pred -cccccc-cCCCCeeEeCCCCceeCCCCCc
Q psy11799 283 -ICQQIC-NLLGGYKCGCPEGYVRHPFSNE 310 (483)
Q Consensus 283 -~c~~~C-~~~g~~~C~C~~G~~g~~~~~~ 310 (483)
...+.| +..++|+|.|++||+|..++..
T Consensus 147 ~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 147 NTDNEVCXNVEGVYXCQCMEGFTFDXEXNV 176 (186)
T ss_dssp CTTTEEEEEETTEEEEEECTTCEEETTTTE
T ss_pred cccCcceecCCCCeeeECCCCCccCccccc
Confidence 224778 8889999999999999877643
No 6
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.68 E-value=9e-18 Score=147.60 Aligned_cols=146 Identities=34% Similarity=0.788 Sum_probs=110.7
Q ss_pred ccchhccCCCCC-CCeEEeCCCCeEEeCCCCceeCCCCCcccccCc--ccCCC--C--CCCCeeeeCCC----CceEeCC
Q psy11799 190 DINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINE--CEQFP--G--LCAHTCTNTEG----SYTCGCH 258 (483)
Q Consensus 190 ~~~~C~~~~~~C-~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~--C~~~~--~--~~~~~C~~~~g----~~~C~C~ 258 (483)
+|++|+. +.+| +++|++..++|+|.|++||++..+|++|+++++ |...+ + ..+++|++..+ +|+|.|+
T Consensus 2 dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~ 80 (162)
T 1uzk_A 2 DVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCS 80 (162)
T ss_dssp CCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTT
T ss_pred ccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCC
Confidence 5677763 2234 489999999999999999999888999998876 86533 2 23678988776 7999999
Q ss_pred CCceecCCCCCccccCccccCCCCcccccccCCCCeeEeCCC--CceeCCCCCccccCCcCCC--CCCCCCCCCCCCCCC
Q psy11799 259 PGFELSSDGSGTCLDSDECATGRHICQQICNLLGGYKCGCPE--GYVRHPFSNECIDDNECAR--NPCEPSSNTTGERGG 334 (483)
Q Consensus 259 ~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C~~~g~~~C~C~~--G~~g~~~~~~C~~~~~C~~--~~C~~~~~~~c~~~g 334 (483)
+||.+ +. .|. .|.. +..++|+|.|++ ||++......|+++++|.. ++|.+ +
T Consensus 81 ~G~~~---~~-~C~---~C~~---------~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~---------g 135 (162)
T 1uzk_A 81 LGKAW---GT-PCE---MCPA---------VNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG---------G 135 (162)
T ss_dssp TCCEE---TT-TTE---ECCC---------TTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT---------S
T ss_pred CCCCc---CC-Ccc---cCCC---------CCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC---------C
Confidence 99984 22 332 1211 245689999988 9999877778899999975 36865 6
Q ss_pred EEeeCCCCeeEECCCCCeeccCCCcee
Q psy11799 335 KCFNTAGSYRCGCPDGFQFEAALQLCT 361 (483)
Q Consensus 335 ~C~~~~g~~~C~C~~G~~~~~~g~~C~ 361 (483)
+|+++.++|+|.|++||++...++.|+
T Consensus 136 ~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 136 KCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp EEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred EeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 999999999999999999988787763
No 7
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.67 E-value=3.5e-17 Score=143.80 Aligned_cols=140 Identities=38% Similarity=0.720 Sum_probs=105.1
Q ss_pred cCCcCCC-CCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCc--cCC--CCCC----CCcEECCCC-
Q psy11799 313 DDNECAR-NPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSS--CLS--SPCS----FGCTPLGIS- 382 (483)
Q Consensus 313 ~~~~C~~-~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~--C~~--~~C~----~~c~~~~~~- 382 (483)
+|++|+. ++|. +++|+++.++|+|.|++||++...++.|++++ + |.. .+|. ..|+... +
T Consensus 2 dideC~~~~~C~---------~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~-~~~C~~~~~~c~~~~~~~C~~~~-~~ 70 (162)
T 1uzk_A 2 DVNECLDPTTCI---------SGNCVNTPGSYICDCPPDFELNPTRVGCVDTR-SGNCYLDIRPRGDNGDTACSNEI-GV 70 (162)
T ss_dssp CCCGGGSTTSSB---------TSEEEEETTEEEEECCTTCEECTTSSBEECCC-CEEEEEEC----------CEEEE-EE
T ss_pred ccccCCCCCCCC---------CCEeECCCCCEEEeCCCCCeECCCCCcccCCC-CCcccCCCcccCCCCCCcccCCc-CC
Confidence 5788985 7885 47999999999999999999987899999765 4 763 3442 2366654 3
Q ss_pred ---CeeEeCCCCee-ecCCcceecccCC----CCCC--CcccCCC-CCcccccccccCCCCccCCCCCCeEeeCCCCeee
Q psy11799 383 ---GFSCECPSGYQ-RIGQGHCLATISS----GLYP--GFRSYER-PNLGDIDECKEEINGVAVCPKPGTCINTMGSFRC 451 (483)
Q Consensus 383 ---~~~C~C~~Gy~-g~~~g~C~~~~~~----~C~~--g~~g~~~-~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C 451 (483)
+|+|.|++||. +.....|...... .|++ ||++... ..|.+||+|....+ +|.+ ++|+++.++|+|
T Consensus 71 ~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~---~C~~-g~C~n~~gsy~C 146 (162)
T 1uzk_A 71 GVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPG---LCQG-GKCINTFGSFQC 146 (162)
T ss_dssp EECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGG---GGBT-SEEEECSSCEEE
T ss_pred cccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCC---CcCC-CEeEcCCCCEEe
Confidence 79999999998 4444444332111 6776 9998642 35789999986433 7985 799999999999
Q ss_pred eCCCCcccCCCCCCCC
Q psy11799 452 LCPRGFKLDRTGTFCL 467 (483)
Q Consensus 452 ~C~~G~~~~~~g~~C~ 467 (483)
+|++||+|+.++++|+
T Consensus 147 ~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 147 RCPTGYYLNEDTRVCD 162 (162)
T ss_dssp ECCTTCCBCTTTCBBC
T ss_pred eCCCCccCCCCCCccC
Confidence 9999999998898875
No 8
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.66 E-value=4.2e-20 Score=171.26 Aligned_cols=244 Identities=12% Similarity=-0.020 Sum_probs=155.7
Q ss_pred cccccCCCceEEEeCCC---CeeeEeee---cCCCCcccCC--------ceeeeccCcceeeecccCcceee--eecccc
Q psy11799 22 FLINMLAGIFVWSLASQ---WTGEILTN---VSPYPTSVNM--------ASVSTRKGLTGVSVTRDTSYTMA--ILNVEQ 85 (483)
Q Consensus 22 ~~~~~~~g~~~C~C~~g---~~G~~C~~---c~~~~~~~~~--------~~C~c~~g~~g~~C~~~~~~~~~--~~~~~~ 85 (483)
+.-+=..|++.+.+.|| |+|.+++. ....++.+++ ++|.|+.||+|..|+..+..... ..+..+
T Consensus 4 ~~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~p 83 (267)
T 4fbr_A 4 YLVQNQWGGSQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAP 83 (267)
T ss_dssp EEEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSC
T ss_pred eeEeecCCcccCCcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCc
Confidence 34444678888999998 67777662 1122444443 67888888888888764332111 122233
Q ss_pred ccCceEEEeeCceeEEEEEEEEEEEEEeecccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCC
Q psy11799 86 DKQGILIFSMLQTRYFNLFYVIIFYVISLKKKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRT 165 (483)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~ 165 (483)
|.+|... +.+..|...++|+.. | |.++|+|++...+|+|.|++||+|
T Consensus 84 C~nggtc-------------------------~~G~~c~~~~eC~s~-p----C~ngG~C~~~~~sy~C~C~~Gf~G--- 130 (267)
T 4fbr_A 84 WQPGGVW-------------------------VLGARDKQNIVAVSI-K----SNDGGKTLTGTTTYNGEGPIGFKS--- 130 (267)
T ss_dssp EEEEEEE-------------------------ECCCCSSCCEEEEEE-E----CSSTTSEEEEEEEETTSCCEEEEE---
T ss_pred ccCCCee-------------------------eccCccccccccCCC-C----CCCCCEEecCCccEEeeCCCCccc---
Confidence 3333221 126778877899865 4 999999999999999999999995
Q ss_pred CCccccCCCCCCCCCccCCCccccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCe
Q psy11799 166 GTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHT 245 (483)
Q Consensus 166 g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~ 245 (483)
..|+. ++++|......-...|.+. .+| |. |.+|.....+...++.++++
T Consensus 131 -~~Ce~------------------~~d~C~n~~~c~s~pC~ng---g~c-----~~----G~~c~~~i~c~~~~c~ngg~ 179 (267)
T 4fbr_A 131 -EVTDG------------------DTYSVENQWGGSAAPWHSG---GVW-----VL----GTRGKQNVINVDAKSNDGGK 179 (267)
T ss_dssp -EECCC------------------CEEEEEEECSSTTSCCEEE---EEE-----EC----CSSTTSCEEEEEEECSSTTS
T ss_pred -cCCCC------------------CcccccccCCcCCccccCC---cce-----ec----ccccccccccCCCCCCCCCE
Confidence 45541 2233222221111223221 122 22 66675444566778999999
Q ss_pred eeeCCCCceEeCCCCceecCCCCCccc-cCccccCCCCccc-ccccCCCCeeEeCCCCceeCCCCCccccCCcCCCCCCC
Q psy11799 246 CTNTEGSYTCGCHPGFELSSDGSGTCL-DSDECATGRHICQ-QICNLLGGYKCGCPEGYVRHPFSNECIDDNECARNPCE 323 (483)
Q Consensus 246 C~~~~g~~~C~C~~G~~~~~~g~~~C~-~~~~C~~~~~~c~-~~C~~~g~~~C~C~~G~~g~~~~~~C~~~~~C~~~~C~ 323 (483)
|++..++|+|.|++||++ . .|. ++++|+... .+. ..|...+.+.+.|+.++....+. .+|.
T Consensus 180 C~dg~~~y~C~Cp~Gf~G----~-~c~~~i~ec~~~~-~c~~~~c~~gG~~~~~C~~g~n~~~c~-----------~~c~ 242 (267)
T 4fbr_A 180 TLSGTMTYNGEGPIGFRG----T-LTSPDTYTVENQW-GGSTAPWNPGGFWMIGARNGQNVVALN-----------VASS 242 (267)
T ss_dssp EEEEEEEETTSCCEEEEE----E-EEETTEEEEEEEC-SCTTSCCEEEEEEECCCCTTCCEEEEE-----------EECS
T ss_pred eeCCCCCeEEeCCCCccc----c-ccccccceeccCC-CccCCcccCCCeEEEecCCCCccccCC-----------cCCC
Confidence 999999999999999994 4 443 455554332 222 33444566777788887654221 2566
Q ss_pred CCCCCCCCCCCEEeeCCCCeeEECCCCCeec
Q psy11799 324 PSSNTTGERGGKCFNTAGSYRCGCPDGFQFE 354 (483)
Q Consensus 324 ~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~ 354 (483)
+ +|+|++...+|.|.|++||+|.
T Consensus 243 n--------gGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 243 D--------GGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp S--------TTSEEEEEEEETTSCCEEEEEE
T ss_pred C--------CCEeeCCCcceeecCCCCcccc
Confidence 6 8999999999999999999764
No 9
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.65 E-value=4e-16 Score=134.07 Aligned_cols=122 Identities=25% Similarity=0.627 Sum_probs=96.3
Q ss_pred CCEEeeCCCCeeEECCCCCeec-----cCCCceeeCCCccCCC---CCCCC--cEECCCCCeeEeCCCCeeecCCcceec
Q psy11799 333 GGKCFNTAGSYRCGCPDGFQFE-----AALQLCTQLSSSCLSS---PCSFG--CTPLGISGFSCECPSGYQRIGQGHCLA 402 (483)
Q Consensus 333 ~g~C~~~~g~~~C~C~~G~~~~-----~~g~~C~~~~~~C~~~---~C~~~--c~~~~~~~~~C~C~~Gy~g~~~g~C~~ 402 (483)
+++|++. |+|.|++||++. ..++.|++++ +|... +|.++ |+... ++|+|.|++||+|....
T Consensus 12 ~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~did-eC~~~~~~~C~~~~~C~n~~-g~y~C~C~~Gy~g~~~~---- 82 (143)
T 2bou_A 12 DSSCVNA---TACRCNPGFSSFSEIITTPMETCDDIN-ECATLSKVSCGKFSDCWNTE-GSYDCVCSPGYEPVSGA---- 82 (143)
T ss_dssp TEEESSS---SCEEECTTEECSSSSBCSTTCCCEECC-GGGC----CCCTTEEEEECS-SCEEEEECTTEEETTCC----
T ss_pred CCEEcCC---CEEeCCCCCcCccccccCCCCcCCccc-cccCCCCCCCCCCCEEEcCC-CCeEeECCCCcccCcCc----
Confidence 8999875 799999999874 2357898877 99854 89865 77777 89999999999997421
Q ss_pred ccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 403 TISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 403 ~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
..+.......|.+|++|....+ +|.++++|+++.++|+|+|++||++...+..|+++++|+
T Consensus 83 -------~~~~~~~~~~C~dideC~~~~~---~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 83 -------KTFKNESENTCQDVDECSSGQH---QCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143 (143)
T ss_dssp -------SCBSSGGGCCEEECCHHHHTCC---CCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCBC
T ss_pred -------cccccCCCCCcCCccCccCcCC---CCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCccC
Confidence 1111111134889999986333 899999999999999999999999999999999888774
No 10
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=131.44 Aligned_cols=110 Identities=37% Similarity=0.933 Sum_probs=84.4
Q ss_pred CcCCCCCCCCCCCCCCCCCCEEeeCC--CCeeEECCCCCeeccCCCceee------------CCCccCCCCCCCCcEEC-
Q psy11799 315 NECARNPCEPSSNTTGERGGKCFNTA--GSYRCGCPDGFQFEAALQLCTQ------------LSSSCLSSPCSFGCTPL- 379 (483)
Q Consensus 315 ~~C~~~~C~~~~~~~c~~~g~C~~~~--g~~~C~C~~G~~~~~~g~~C~~------------~~~~C~~~~C~~~c~~~- 379 (483)
|+|..+||.+ +++|++.. ++|+|.|++||+ ++.|+. ..++|...||.++.++.
T Consensus 1 d~C~~~pC~~--------~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~ 68 (143)
T 4d90_A 1 DICDPNPCEN--------GGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEI 68 (143)
T ss_dssp --CCSCCCGG--------GCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEE
T ss_pred CcCCCCcCCC--------CCEeeCCCCCCCEEeECCCCCC----CCCCccCccccccccccccCCcCCCCCCCCCCEecC
Confidence 4677888988 89999876 689999999994 555654 22378888998863332
Q ss_pred -------CCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcc-cccccccCCCCccCCCCCCeEeeCCCCeee
Q psy11799 380 -------GISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLG-DIDECKEEINGVAVCPKPGTCINTMGSFRC 451 (483)
Q Consensus 380 -------~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~-~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C 451 (483)
..++|+|.|++||+|.. |+ ++++|... +|.++++|++..++|+|
T Consensus 69 ~~~~~~~~~~~~~C~C~~G~~G~~-----------------------C~~~i~~C~~~-----~C~~~~~C~~~~g~~~C 120 (143)
T 4d90_A 69 SEAYRGDTFIGYVCKCPRGFNGIH-----------------------CQHNINECEVE-----PCKNGGICTDLVANYSC 120 (143)
T ss_dssp CCCEETTEECCEEEECCTTEESTT-----------------------SCEECCTTTTC-----CSCTTCEEEEETTEEEE
T ss_pred CCccccCCCCCeEeECcCCCcCCC-----------------------cccCCCcCCCC-----CCCCCCEeECCCCCeEe
Confidence 12689999999998765 76 88999754 89999999999999999
Q ss_pred eCCCCcccCCCCCCCCC
Q psy11799 452 LCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 452 ~C~~G~~~~~~g~~C~~ 468 (483)
+|++|| .|..|+.
T Consensus 121 ~C~~G~----~G~~c~~ 133 (143)
T 4d90_A 121 ECPGEF----MGRNCQY 133 (143)
T ss_dssp ECCTTC----BSTTSCB
T ss_pred ECCCCC----ccCCcee
Confidence 999999 6666664
No 11
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.60 E-value=1.7e-15 Score=130.12 Aligned_cols=116 Identities=34% Similarity=0.801 Sum_probs=90.6
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeCC-----CCCccccCCCCCCCCCccCCCccccccchhccCC-CCCC--CeEEeCCC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLDR-----TGTFCLDQDECTDDSKCREGCQTCEDINECLELS-NQCA--FRCHNVPG 210 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~~-----~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~-~~C~--~~C~~~~g 210 (483)
|.++++|++. |+|+|++||+|.. .+..| +++++|.... ..|. +.|++..+
T Consensus 9 C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C-------------------~dideC~~~~~~~C~~~~~C~n~~g 66 (143)
T 2bou_A 9 CPQDSSCVNA---TACRCNPGFSSFSEIITTPMETC-------------------DDINECATLSKVSCGKFSDCWNTEG 66 (143)
T ss_dssp CCTTEEESSS---SCEEECTTEECSSSSBCSTTCCC-------------------EECCGGGC----CCCTTEEEEECSS
T ss_pred CCCCCEEcCC---CEEeCCCCCcCccccccCCCCcC-------------------CccccccCCCCCCCCCCCEEEcCCC
Confidence 9999999875 7999999999752 22344 4555555432 1333 89999999
Q ss_pred CeEEeCCCCceeCCC--------CCcccccCcccC--CCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccc
Q psy11799 211 SFRCICPYGYALAPD--------GRHCIDINECEQ--FPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDEC 277 (483)
Q Consensus 211 s~~C~C~~G~~~~~~--------g~~C~~~~~C~~--~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C 277 (483)
+|+|.|++||++... +..|+++++|.. .+|..+++|+++.++|+|.|++||++...+. .|..+++|
T Consensus 67 ~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~-~C~~~~~C 142 (143)
T 2bou_A 67 SYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP-NNQKDTVC 142 (143)
T ss_dssp CEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCC-SSBTTCCB
T ss_pred CeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCc-cCccCCcc
Confidence 999999999996533 348999999985 6787789999999999999999999887766 77776665
No 12
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.60 E-value=2.8e-15 Score=128.78 Aligned_cols=112 Identities=31% Similarity=0.680 Sum_probs=91.8
Q ss_pred CCCCCeEeeCC--CceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCCCeEE-------eCC
Q psy11799 139 CPKPGTCINTM--GSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFRCH-------NVP 209 (483)
Q Consensus 139 C~~~g~C~~~~--g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~C~-------~~~ 209 (483)
|.++|+|++.. ++|+|+|++||+ |..|+.+.++... ...|.++++|...++..++.|+ +..
T Consensus 8 C~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~------~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~ 77 (143)
T 4d90_A 8 CENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASD------EEEPTSAGPCTPNPCHNGGTCEISEAYRGDTF 77 (143)
T ss_dssp CGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTT------TTSCCCCCTTSSCCCCTTCEEEECCCEETTEE
T ss_pred CCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCcccccc------ccccccCCcCCCCCCCCCCEecCCCccccCCC
Confidence 99999999875 689999999998 6667655544332 3456677888877766668999 566
Q ss_pred CCeEEeCCCCceeCCCCCccc-ccCcccCCCCCCCCeeeeCCCCceEeCCCCceec
Q psy11799 210 GSFRCICPYGYALAPDGRHCI-DINECEQFPGLCAHTCTNTEGSYTCGCHPGFELS 264 (483)
Q Consensus 210 gs~~C~C~~G~~~~~~g~~C~-~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~ 264 (483)
++|+|.|++||+ |.+|+ ++++|...+|.++++|+++.++|+|.|++||++.
T Consensus 78 ~~~~C~C~~G~~----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 129 (143)
T 4d90_A 78 IGYVCKCPRGFN----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGR 129 (143)
T ss_dssp CCEEEECCTTEE----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBST
T ss_pred CCeEeECcCCCc----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccC
Confidence 799999999999 99997 9999999999999999999999999999999954
No 13
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.58 E-value=5.1e-15 Score=154.28 Aligned_cols=142 Identities=29% Similarity=0.613 Sum_probs=107.9
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCEEeeCCCC-eeE-ECCCCCeeccCCCceeeCCCccCCCC--CCC-----CcEECCCCC
Q psy11799 313 DDNECARNPCEPSSNTTGERGGKCFNTAGS-YRC-GCPDGFQFEAALQLCTQLSSSCLSSP--CSF-----GCTPLGISG 383 (483)
Q Consensus 313 ~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~-~~C-~C~~G~~~~~~g~~C~~~~~~C~~~~--C~~-----~c~~~~~~~ 383 (483)
++++|..+||.+ +++|++..++ |+| .|++||++ .++.|+.++ +|...+ |.+ .|+... ++
T Consensus 2 DIDeC~~nPC~~--------gg~C~n~~~Gsy~C~~C~~GytG--dg~~CeDiD-EC~~~p~~C~~gg~~~~CvNt~-gs 69 (634)
T 1yo8_A 2 DPDGCLSNPCFP--------GAQCSSFPDGSWSCGFCPVGFLG--NGTHCEDLD-ECALVPDICFSTSKVPRCVNTQ-PG 69 (634)
T ss_dssp --CGGGGCCSCT--------TCCEEECTTSCEEECCCCTTBCS--CSSSCCBCC-TTTTSCCCSCCCSSSCCEEECS-SS
T ss_pred cccccCCCCCCC--------CCEEecCCCCCeECCcCCCccCC--CCCCccccc-cccCCCCcccCCccccceeecc-Cc
Confidence 578898889988 8999999864 999 99999976 458899777 999777 986 477776 89
Q ss_pred eeEe-CCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCC----CCeeeeCCCCcc
Q psy11799 384 FSCE-CPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTM----GSFRCLCPRGFK 458 (483)
Q Consensus 384 ~~C~-C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~----g~~~C~C~~G~~ 458 (483)
|+|. |++||+|.... ... ..+.......|.++++|....+ +|.++++|+++. ++|+|.|++||.
T Consensus 70 Y~C~~C~~Gy~G~~c~---g~g-----~~~~~~dg~~C~dideC~~~~~---pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~ 138 (634)
T 1yo8_A 70 FHCLPCPPRYRGNQPV---GVG-----LEAAKTEKQVCEPENPCKDKTH---NCHKHAECIYLGHFSDPMYKCECQTGYA 138 (634)
T ss_dssp EEECCCCTTEEECCCE---ESS-----SHHHHSCCCCEEECCTTTTTCC---CCCTTEEEEECCTTCSSSEEEEECTTEE
T ss_pred eecccCCCCcccCccc---ccc-----ccccccCCCcccccccccCCCc---ccccCccccccccccccceeeeccCCcc
Confidence 9999 99999997511 000 0000011244889999986444 899999999998 999999999997
Q ss_pred cCCCCCCCC---CCcCCCCC-CCcc
Q psy11799 459 LDRTGTFCL---DQDECTDD-SKCR 479 (483)
Q Consensus 459 ~~~~g~~C~---~~~~C~~~-~~C~ 479 (483)
++ |..|+ ++++|... ..|.
T Consensus 139 Gd--G~~Ce~d~DiDeC~~~~~~C~ 161 (634)
T 1yo8_A 139 GD--GLICGEDSDLDGWPNLNLVCA 161 (634)
T ss_dssp ES--SSSEEECTTSSSSCSSCCTTT
T ss_pred cc--CcccccccCcccccCCCCccc
Confidence 64 68897 78898754 6675
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.54 E-value=3.4e-15 Score=131.79 Aligned_cols=150 Identities=26% Similarity=0.618 Sum_probs=98.4
Q ss_pred CCCceEeCCCCceecCCCCCccccCccccCCCCccc--ccccCCCCeeEeCCCCceeCCCCCccccCCcCCCCCCCCCCC
Q psy11799 250 EGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQ--QICNLLGGYKCGCPEGYVRHPFSNECIDDNECARNPCEPSSN 327 (483)
Q Consensus 250 ~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~--~~C~~~g~~~C~C~~G~~g~~~~~~C~~~~~C~~~~C~~~~~ 327 (483)
...+.|.|++||++.. |.. +|... ..+. +.|+. ...|.|++||+|..++. +.|.. .|..
T Consensus 14 ~~~~~c~C~~g~~G~~-----C~~--~C~~~-~~c~~~g~C~~--~g~C~C~~G~~G~~C~~-----~~C~~-~C~~--- 74 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFG-----CNK--FCRPR-DDFFGHYACDQ--NGNKTCMEGWMGPECNR-----AICRQ-GCSP--- 74 (169)
T ss_dssp -------CCTTEETTT-----TCE--ECCCE-EETTEEEEECS--SCCEEECTTEESTTSCE-----ECCCT-TCCT---
T ss_pred ccCeeeeCCCcCcCCC-----ccc--ccCCC-CCcCCCCEeCC--CCeeECCCCCcCCCCCC-----CCCCC-CCCC---
Confidence 3456799999999543 332 23321 1121 45532 45789999999976641 23442 3431
Q ss_pred CCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCccCCCC-CCCCcEECCCCCeeEeCCCCeeecCCcceecccCC
Q psy11799 328 TTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSSCLSSP-CSFGCTPLGISGFSCECPSGYQRIGQGHCLATISS 406 (483)
Q Consensus 328 ~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~~~~-C~~~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~ 406 (483)
.+|.|++ .|+|.|++||. |..|+ +|...+ |.++ ++. .+|+|.|++||+|..
T Consensus 75 ----~~g~C~~---~~~C~C~~G~~----G~~C~----~C~~~~~C~~g-~C~--~~~~C~C~~G~~G~~---------- 126 (169)
T 2vj2_A 75 ----KHGSCKL---PGDCRCQYGWQ----GLYCD----KCIPHPGCVHG-ICN--EPWQCLCETNWGGQL---------- 126 (169)
T ss_dssp ----TTEECSS---TTCCEECTTEE----SSSSC----EECCCTTCSSE-ECS--STTCCEECTTEETTT----------
T ss_pred ----CCcccCC---CCeeECCCCCC----CCCcc----cCCCCCCCCCC-CcC--CCCEEeCCCCCCCCc----------
Confidence 1577875 47999999995 55564 355555 7766 444 578999999998764
Q ss_pred CCCCCcccCCCCCcc-cccccccCCCCccCCCCCCeEeeC-CCCeeeeCCCCcccCCCCCCCC
Q psy11799 407 GLYPGFRSYERPNLG-DIDECKEEINGVAVCPKPGTCINT-MGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 407 ~C~~g~~g~~~~~C~-~~~~C~~~~~~~~~C~~~g~C~~~-~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
|+ ++++|... . +|.++|+|+++ .++|+|+|++|| .|..|+
T Consensus 127 -------------C~~~~~~C~~~-~---~C~~~g~C~~~~~~~~~C~C~~G~----~G~~Ce 168 (169)
T 2vj2_A 127 -------------CDKDLNYCGTH-Q---PCLNGGTCSNTGPDKYQCSCPEGY----SGPNCE 168 (169)
T ss_dssp -------------TCEESCHHHHT-C---CCCTTCEEEECSTTCEEEECCTTC----CSTTSC
T ss_pred -------------ccCCCCCCCCC-C---CCCCCCEEcCCCCCCcEeECCCCC----cCcCcC
Confidence 65 78888751 2 89999999996 899999999999 777775
No 15
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.53 E-value=2.9e-15 Score=123.91 Aligned_cols=114 Identities=35% Similarity=0.727 Sum_probs=87.0
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCEEeeC-CCCeeEECCCCCeeccC-CCceeeCCCccCCCCCCCCcEECCCCCeeEeCC
Q psy11799 312 IDDNECARNPCEPSSNTTGERGGKCFNT-AGSYRCGCPDGFQFEAA-LQLCTQLSSSCLSSPCSFGCTPLGISGFSCECP 389 (483)
Q Consensus 312 ~~~~~C~~~~C~~~~~~~c~~~g~C~~~-~g~~~C~C~~G~~~~~~-g~~C~~~~~~C~~~~C~~~c~~~~~~~~~C~C~ 389 (483)
+++++|..+||.+ +|++. .++|+|.|++||+|... ...|+. +|...+|...|+. .++|+|.|+
T Consensus 2 ~dideC~~~pC~~----------~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~---~C~~~~C~~~C~~--~~~y~C~C~ 66 (118)
T 1dx5_I 2 EPVDPCFRANCEY----------QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM---FCNQTACPADCDP--NTQASCECP 66 (118)
T ss_dssp CCCCGGGGCCCSS----------EEEECSSSCEEEECCTTEEEETTEEEEEEE---CCCSSEEECEECT--TSTTCEECC
T ss_pred CccccCCCCCCCC----------CCCCCCCCCEEeECCCCccccCCCCCcccc---ccCCCCCCCcccC--CCCeEeECC
Confidence 4678898889964 99999 89999999999988632 124543 3556666644554 378999999
Q ss_pred CCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCC-CCCC
Q psy11799 390 SGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRT-GTFC 466 (483)
Q Consensus 390 ~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~-g~~C 466 (483)
+||++... ..|.+|++|... + +| +++|+++.++|+|+|++||+++.+ ++.|
T Consensus 67 ~Gy~~~~g--------------------~~C~dideC~~~-~---~C--~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 67 EGYILDDG--------------------FICTDIDECENG-G---FC--SGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TTEEEETT--------------------TEEEECCHHHHC-S---SC--SSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCccCCCC--------------------CccccccccCCC-C---CC--cCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 99996531 237889999862 2 89 799999999999999999987765 5544
No 16
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.53 E-value=5.3e-14 Score=146.64 Aligned_cols=144 Identities=31% Similarity=0.658 Sum_probs=107.6
Q ss_pred cccccccCCCCccCCCCCCeEeeCCC-ceEe-eCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCC
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTMG-SFRC-LCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA 202 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~g-~~~C-~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~ 202 (483)
++++|... | |+++++|++..+ +|+| .|++||+|+ ++.|+++++|.. .+..|.
T Consensus 2 DIDeC~~n-P----C~~gg~C~n~~~Gsy~C~~C~~GytGd--g~~CeDiDEC~~-------------------~p~~C~ 55 (634)
T 1yo8_A 2 DPDGCLSN-P----CFPGAQCSSFPDGSWSCGFCPVGFLGN--GTHCEDLDECAL-------------------VPDICF 55 (634)
T ss_dssp --CGGGGC-C----SCTTCCEEECTTSCEEECCCCTTBCSC--SSSCCBCCTTTT-------------------SCCCSC
T ss_pred cccccCCC-C----CCCCCEEecCCCCCeECCcCCCccCCC--CCCccccccccC-------------------CCCccc
Confidence 67899743 3 999999999975 5999 999999864 566766665544 343343
Q ss_pred --C---eEEeCCCCeEEe-CCCCceeCC-----------CCCcccccCcccC--CCCCCCCeeeeCC----CCceEeCCC
Q psy11799 203 --F---RCHNVPGSFRCI-CPYGYALAP-----------DGRHCIDINECEQ--FPGLCAHTCTNTE----GSYTCGCHP 259 (483)
Q Consensus 203 --~---~C~~~~gs~~C~-C~~G~~~~~-----------~g~~C~~~~~C~~--~~~~~~~~C~~~~----g~~~C~C~~ 259 (483)
+ +|++..++|+|. |++||++.. +++.|+++++|.. .+|..+++|+++. ++|+|.|++
T Consensus 56 ~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~ 135 (634)
T 1yo8_A 56 STSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQT 135 (634)
T ss_dssp CCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECT
T ss_pred CCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccC
Confidence 5 899999999999 999998542 3456888999985 4787789999998 999999999
Q ss_pred CceecCCCCCccc---cCccccCCCCcccccccCCCCeeEe---CCCC
Q psy11799 260 GFELSSDGSGTCL---DSDECATGRHICQQICNLLGGYKCG---CPEG 301 (483)
Q Consensus 260 G~~~~~~g~~~C~---~~~~C~~~~~~c~~~C~~~g~~~C~---C~~G 301 (483)
||.+. +. .|. ++++|......|. ..++|.|. |+.+
T Consensus 136 Gy~Gd--G~-~Ce~d~DiDeC~~~~~~C~----~~~~y~C~~dnC~~~ 176 (634)
T 1yo8_A 136 GYAGD--GL-ICGEDSDLDGWPNLNLVCA----TNATYHCIKDNCPHL 176 (634)
T ss_dssp TEEES--SS-SEEECTTSSSSCSSCCTTT----TTCSSSCSCCSSTTS
T ss_pred Ccccc--Cc-ccccccCcccccCCCCccc----CCCCccccccccccc
Confidence 99964 45 675 7888876554443 23566666 6654
No 17
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.50 E-value=4.6e-15 Score=127.98 Aligned_cols=123 Identities=36% Similarity=0.789 Sum_probs=84.9
Q ss_pred ccCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCC----------ccC--CCCCCCC--cE
Q psy11799 312 IDDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSS----------SCL--SSPCSFG--CT 377 (483)
Q Consensus 312 ~~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~----------~C~--~~~C~~~--c~ 377 (483)
+++++|+.+||.+ ++|+++.++|+|.|++||++...+..|.+... .|. .+.|... |.
T Consensus 2 ~dideC~~~pC~n---------g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~ 72 (147)
T 2w86_A 2 ADIDECESSPCIN---------GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCC 72 (147)
T ss_dssp CCCCGGGGCCSBT---------SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHH
T ss_pred CcCccCcCCCCCC---------CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccc
Confidence 4688998889975 69999999999999999999877777765431 111 0000000 00
Q ss_pred ECC---------CCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCC
Q psy11799 378 PLG---------ISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGS 448 (483)
Q Consensus 378 ~~~---------~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~ 448 (483)
... .-.|.|.|++||++.. | ..|++|++|....+ +|.+ ++|+++.++
T Consensus 73 ~~~g~~~g~~C~~c~~~C~C~~Gy~~~~-----------------g---~~C~dideC~~~~~---~C~~-g~C~n~~g~ 128 (147)
T 2w86_A 73 SSLGAAWGSPCTLCQVDPICGKGYSRIK-----------------G---TQCEDIDECEVFPG---VCKN-GLCVNTRGS 128 (147)
T ss_dssp TTTCSEETTTTEECCCCTTTCTTEEEEE-----------------T---TEEEECCHHHHSTT---CSSS-SEEEEETTE
T ss_pred cCcCcccCCCcccCCCcccCCCccccCC-----------------C---CccCccccccCCCC---CCCC-CEEECCCCC
Confidence 000 0114556666665321 2 23889999986543 6985 699999999
Q ss_pred eeeeCCCCcccCCCCCCCC
Q psy11799 449 FRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 449 ~~C~C~~G~~~~~~g~~C~ 467 (483)
|+|+|++||+++.++++|+
T Consensus 129 y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 129 FKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp EEEECCTTCCBCTTSSCBC
T ss_pred EEeeCCCCCccCCCCCeeC
Confidence 9999999999998888874
No 18
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.49 E-value=6.1e-15 Score=130.15 Aligned_cols=146 Identities=25% Similarity=0.573 Sum_probs=91.1
Q ss_pred cccccCCCceEEEeCCCCeeeEeee-cCCCCccc------CCceeeeccCcceeeecccCcceeeeeccccccCceEEEe
Q psy11799 22 FLINMLAGIFVWSLASQWTGEILTN-VSPYPTSV------NMASVSTRKGLTGVSVTRDTSYTMAILNVEQDKQGILIFS 94 (483)
Q Consensus 22 ~~~~~~~g~~~C~C~~g~~G~~C~~-c~~~~~~~------~~~~C~c~~g~~g~~C~~~~~~~~~~~~~~~~~~g~~~~~ 94 (483)
....+....+.|+|.+||+|..|+. |.+..... ..++|.|.+||+|..|+.
T Consensus 8 ~~~~~~~~~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~---------------------- 65 (169)
T 2vj2_A 8 HHHGSIEGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNR---------------------- 65 (169)
T ss_dssp -------------CCTTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCE----------------------
T ss_pred ccccccccCeeeeCCCcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCC----------------------
Confidence 3344556678899999999999974 65432112 234557777777766554
Q ss_pred eCceeEEEEEEEEEEEEEeecccCcccccccccccccCCCCccCCC-CCCeEeeCCCceEeeCCCCCeeCCCCCccccCC
Q psy11799 95 MLQTRYFNLFYVIIFYVISLKKKKFYSVFLDMDECKEEINGVAVCP-KPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQD 173 (483)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~C~~~~~~~~~C~-~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~ 173 (483)
+.|... |. .+|+|++ .|+|+|++||+ |..|+
T Consensus 66 --------------------------------~~C~~~------C~~~~g~C~~---~~~C~C~~G~~----G~~C~--- 97 (169)
T 2vj2_A 66 --------------------------------AICRQG------CSPKHGSCKL---PGDCRCQYGWQ----GLYCD--- 97 (169)
T ss_dssp --------------------------------ECCCTT------CCTTTEECSS---TTCCEECTTEE----SSSSC---
T ss_pred --------------------------------CCCCCC------CCCCCcccCC---CCeeECCCCCC----CCCcc---
Confidence 112211 43 5677865 46899999999 44553
Q ss_pred CCCCCCCccCCCccccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCccc-ccCcccC-CCCCCCCeeeeC-C
Q psy11799 174 ECTDDSKCREGCQTCEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECEQ-FPGLCAHTCTNT-E 250 (483)
Q Consensus 174 ~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~-~~~~C~~-~~~~~~~~C~~~-~ 250 (483)
+|.....|.+ ++|+ ++|+|+|++||+ |..|+ ++++|.. .+|.++++|+++ .
T Consensus 98 ~C~~~~~C~~-------------------g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~~~~C~~~g~C~~~~~ 151 (169)
T 2vj2_A 98 KCIPHPGCVH-------------------GICN---EPWQCLCETNWG----GQLCDKDLNYCGTHQPCLNGGTCSNTGP 151 (169)
T ss_dssp EECCCTTCSS-------------------EECS---STTCCEECTTEE----TTTTCEESCHHHHTCCCCTTCEEEECST
T ss_pred cCCCCCCCCC-------------------CCcC---CCCEEeCCCCCC----CCcccCCCCCCCCCCCCCCCCEEcCCCC
Confidence 1222111111 3554 467999999999 99996 7899975 788889999996 7
Q ss_pred CCceEeCCCCcee
Q psy11799 251 GSYTCGCHPGFEL 263 (483)
Q Consensus 251 g~~~C~C~~G~~~ 263 (483)
++|+|+|++||++
T Consensus 152 ~~~~C~C~~G~~G 164 (169)
T 2vj2_A 152 DKYQCSCPEGYSG 164 (169)
T ss_dssp TCEEEECCTTCCS
T ss_pred CCcEeECCCCCcC
Confidence 8899999999984
No 19
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.45 E-value=5.6e-14 Score=116.12 Aligned_cols=109 Identities=27% Similarity=0.618 Sum_probs=84.8
Q ss_pred ccCcccCCCCCCCCeeeeC-CCCceEeCCCCceecCCCCCccccCccccCCCCcccccccCCCCeeEeCCCCceeCCCCC
Q psy11799 231 DINECEQFPGLCAHTCTNT-EGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQICNLLGGYKCGCPEGYVRHPFSN 309 (483)
Q Consensus 231 ~~~~C~~~~~~~~~~C~~~-~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C~~~g~~~C~C~~G~~g~~~~~ 309 (483)
++++|...||. ++|+++ .++|+|.|++||++.......|.+ +|.. ..|.+.|...++|+|.|++||++.. ..
T Consensus 3 dideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~--~C~~--~~C~~~C~~~~~y~C~C~~Gy~~~~-g~ 75 (118)
T 1dx5_I 3 PVDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQM--FCNQ--TACPADCDPNTQASCECPEGYILDD-GF 75 (118)
T ss_dssp CCCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETTEEEEEEE--CCCS--SEEECEECTTSTTCEECCTTEEEET-TT
T ss_pred ccccCCCCCCC--CCCCCCCCCCEEeECCCCccccCCCCCcccc--ccCC--CCCCCcccCCCCeEeECCCCccCCC-CC
Confidence 67889888876 499999 899999999999976432112332 2332 3555677336899999999999776 67
Q ss_pred ccccCCcCCC-CCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccC
Q psy11799 310 ECIDDNECAR-NPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAA 356 (483)
Q Consensus 310 ~C~~~~~C~~-~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~ 356 (483)
.|+++++|.. ++| . ++|+++.++|+|.|++||++...
T Consensus 76 ~C~dideC~~~~~C-~---------~~C~n~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 76 ICTDIDECENGGFC-S---------GVCHNLPGTFECICGPDSALAGQ 113 (118)
T ss_dssp EEEECCHHHHCSSC-S---------SEEEECSSSEEEEECSSSSCEEE
T ss_pred ccccccccCCCCCC-c---------CeEEeCCCCEEEECCCCCccCCC
Confidence 8899999987 788 3 69999999999999999987554
No 20
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.45 E-value=7.5e-14 Score=135.86 Aligned_cols=156 Identities=28% Similarity=0.647 Sum_probs=62.5
Q ss_pred CCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccCCCCcccccccCCCCeeEeCCCCceeCCCCCccccCCcC
Q psy11799 238 FPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQICNLLGGYKCGCPEGYVRHPFSNECIDDNEC 317 (483)
Q Consensus 238 ~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C~~~g~~~C~C~~G~~g~~~~~~C~~~~~C 317 (483)
.+|.++++|.+ .+.|.|++||++. .|.. +.|.. .....+.|.. .+.|.|++||+|..|+ .+.|
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~-----~C~~-~~C~~-~C~~~G~C~~--~~~C~C~~G~~G~~C~-----~~~C 215 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGP-----HCEK-ALCTP-RCMNGGLCVT--PGFCICPPGFYGVNCD-----KANC 215 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESS-----SSCE-ESSSS-CCCTTCEECS--SCCEECCTTCBTTTTC-----BCCC
T ss_pred CCCCCCCEECC---CCeEECCCCCcCC-----CCCC-CCCCC-CCCCCCEEcC--CCEEeCCCCccCCCcc-----cCcC
Confidence 46777889965 4789999999943 4442 23432 1122356633 4789999999998765 1335
Q ss_pred CCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCccCCCCCCCCcEECCCCCeeEeCCCCeeecCC
Q psy11799 318 ARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSSCLSSPCSFGCTPLGISGFSCECPSGYQRIGQ 397 (483)
Q Consensus 318 ~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~~~~C~~~c~~~~~~~~~C~C~~Gy~g~~~ 397 (483)
. .+|.+ +|+|++. +.|.|++|| .|..|+.. .|. .+|.++.++. +.++|.|++||+|..
T Consensus 216 ~-~~C~~--------~G~C~~~---~~C~C~~G~----~G~~C~~~--~C~-~~C~~~g~C~--~~~~C~C~~G~~G~~- 273 (324)
T 2ygq_A 216 S-TTCFN--------GGTCFYP---GKCICPPGL----EGEQCEIS--KCP-QPCRNGGKCI--GKSKCKCSKGYQGDL- 273 (324)
T ss_dssp S-SCCCS--------SCCBSCS---SCBCCCTTC----CTTTTC------------------------------------
T ss_pred C-CCCCC--------CCeeCCC---CeeeCCCCc----cCCCCCcC--cCC-CcCCCCCEEC--CCCEEECCCCCcCCC-
Confidence 3 46766 8899763 599999999 56677642 464 6788765554 357999999999865
Q ss_pred cceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 398 GHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 398 g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
|+ ++.|.. +|.++|+|++ .++|+|++|| .|..|+.
T Consensus 274 ----------------------C~-~~~C~~------~C~~~g~C~~---~~~C~C~~G~----~G~~C~~ 308 (324)
T 2ygq_A 274 ----------------------CS-KPVCEP------GCGAHGTCHE---PNKCQCQEGW----HGRHCNK 308 (324)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ----------------------Cc-CCCCCC------CCCCCCEECC---CCEeECCCCC----cCCCCCC
Confidence 43 345642 7999999986 4789999999 7888874
No 21
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.40 E-value=8e-14 Score=120.17 Aligned_cols=118 Identities=33% Similarity=0.768 Sum_probs=87.1
Q ss_pred ccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCc-----------cccCCCCccc--ccc-cCCCC---
Q psy11799 231 DINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSD-----------ECATGRHICQ--QIC-NLLGG--- 293 (483)
Q Consensus 231 ~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~-----------~C~~~~~~c~--~~C-~~~g~--- 293 (483)
+|++|+.+||.+ ++|+++.++|+|.|++||++...+. .|.+.. .|......+. ..| +..+.
T Consensus 3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~-~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g 80 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKT-ICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG 80 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSS-BEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCC-eecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence 688999999975 6999999999999999999877665 666532 2221111111 122 33332
Q ss_pred -------eeEeCCCCceeCCCCCccccCCcCCCC--CCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCce
Q psy11799 294 -------YKCGCPEGYVRHPFSNECIDDNECARN--PCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLC 360 (483)
Q Consensus 294 -------~~C~C~~G~~g~~~~~~C~~~~~C~~~--~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C 360 (483)
|.|.|++||++. ....|+++++|... +|.+ ++|+++.++|+|.|++||+++..++.|
T Consensus 81 ~~C~~c~~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~---------g~C~n~~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 81 SPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKN---------GLCVNTRGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp TTTEECCCCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSS---------SEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred CCcccCCCcccCCCccccC-CCCccCccccccCCCCCCCC---------CEEECCCCCEEeeCCCCCccCCCCCee
Confidence 788999999752 24678899999854 5876 599999999999999999998777766
No 22
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.39 E-value=2.7e-13 Score=131.89 Aligned_cols=154 Identities=31% Similarity=0.746 Sum_probs=63.9
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCCCeEEeCCCCeEEeCCC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFRCHNVPGSFRCICPY 218 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~ 218 (483)
|.++|+|++ .|+|.|++||+ |..|+. +.|.. +| ..++.|+. .++|.|++
T Consensus 155 C~~~G~C~~---~~~C~C~~G~~----G~~C~~-~~C~~--~C------------------~~~G~C~~---~~~C~C~~ 203 (324)
T 2ygq_A 155 CRNGGFCNE---RRICECPDGFH----GPHCEK-ALCTP--RC------------------MNGGLCVT---PGFCICPP 203 (324)
T ss_dssp CCSSCEECT---TSCEECCTTEE----SSSSCE-ESSSS--CC------------------CTTCEECS---SCCEECCT
T ss_pred CCCCCEECC---CCeEECCCCCc----CCCCCC-CCCCC--CC------------------CCCCEEcC---CCEEeCCC
Confidence 999999986 36899999999 445642 22321 12 22267865 36899999
Q ss_pred CceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccCCCCcccccccCCCCeeEeC
Q psy11799 219 GYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQICNLLGGYKCGC 298 (483)
Q Consensus 219 G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C~~~g~~~C~C 298 (483)
||+ |..|+. ..|. .+|.++++|++ .++|.|++||+ |. .|. +++|. .+....+.|. +.++|.|
T Consensus 204 G~~----G~~C~~-~~C~-~~C~~~G~C~~---~~~C~C~~G~~----G~-~C~-~~~C~-~~C~~~g~C~--~~~~C~C 265 (324)
T 2ygq_A 204 GFY----GVNCDK-ANCS-TTCFNGGTCFY---PGKCICPPGLE----GE-QCE-ISKCP-QPCRNGGKCI--GKSKCKC 265 (324)
T ss_dssp TCB----TTTTCB-CCCS-SCCCSSCCBSC---SSCBCCCTTCC----TT-TTC--------------------------
T ss_pred Ccc----CCCccc-CcCC-CCCCCCCeeCC---CCeeeCCCCcc----CC-CCC-cCcCC-CcCCCCCEEC--CCCEEEC
Confidence 999 999964 4565 57888889976 36899999999 44 453 34453 1112225563 3579999
Q ss_pred CCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceee
Q psy11799 299 PEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQ 362 (483)
Q Consensus 299 ~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 362 (483)
++||+|..|+ ++.|. .+|.+ +|+|++ .++|.|++|| .|+.|+.
T Consensus 266 ~~G~~G~~C~-----~~~C~-~~C~~--------~g~C~~---~~~C~C~~G~----~G~~C~~ 308 (324)
T 2ygq_A 266 SKGYQGDLCS-----KPVCE-PGCGA--------HGTCHE---PNKCQCQEGW----HGRHCNK 308 (324)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCCCcCCCCc-----CCCCC-CCCCC--------CCEECC---CCEeECCCCC----cCCCCCC
Confidence 9999998765 24454 46766 899986 4699999999 5566654
No 23
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.31 E-value=1.3e-12 Score=102.32 Aligned_cols=85 Identities=28% Similarity=0.552 Sum_probs=68.3
Q ss_pred CeeEECCCCCeeccCCCceeeCCCccCCCCCCCCcEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcc
Q psy11799 342 SYRCGCPDGFQFEAALQLCTQLSSSCLSSPCSFGCTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLG 421 (483)
Q Consensus 342 ~~~C~C~~G~~~~~~g~~C~~~~~~C~~~~C~~~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~ 421 (483)
+|+|.|.+|| .++.|+ ++ +|...||.++ . .+|+|.|++||+ . |+
T Consensus 1 sy~C~C~~g~----~g~~c~-~~-~c~~~pC~n~----~-~~y~C~C~~G~~--~-----------------------C~ 44 (91)
T 1tpg_A 1 SYQVICRDEK----TQMIYQ-QH-QSWLRPVLRS----N-RVEYCWCNSGRA--Q-----------------------CH 44 (91)
T ss_dssp CCCCCCBCSS----SCCBCC-SS-CEEEEECSSS----S-CEEEEECSSSCC--B-----------------------CC
T ss_pred CeeeECCCCC----cCCeEC-CC-cccCCccccC----C-CCcEeECCCCCc--c-----------------------cc
Confidence 5899999999 556664 33 7777777654 3 789999999996 2 54
Q ss_pred --cccccccCCCCccCCCCCCeEeeCC--CCeeeeCCCCcccCCCCCCCC-CCcC
Q psy11799 422 --DIDECKEEINGVAVCPKPGTCINTM--GSFRCLCPRGFKLDRTGTFCL-DQDE 471 (483)
Q Consensus 422 --~~~~C~~~~~~~~~C~~~g~C~~~~--g~~~C~C~~G~~~~~~g~~C~-~~~~ 471 (483)
++++|... ||.++|+|++.. ++|+|+|++|| .|..|+ +++|
T Consensus 45 ~~~~~~C~~~-----pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce~~ide 90 (91)
T 1tpg_A 45 SVPVKSCSEP-----RCFNGGTCQQALYFSDFVCQCPEGF----AGKSCEIDTRA 90 (91)
T ss_dssp EECEEECSSC-----CSCTTCEEEEESSSSCEEEECCTTC----BSSSCCBCSSC
T ss_pred cCcCCcccCC-----CCCCCCEeecCCCCCCeEeECCCCC----cCCcCCcCCCC
Confidence 67889764 899999999887 89999999999 788997 5554
No 24
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.28 E-value=2.6e-12 Score=110.08 Aligned_cols=91 Identities=29% Similarity=0.734 Sum_probs=64.9
Q ss_pred ccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhc
Q psy11799 116 KKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECL 195 (483)
Q Consensus 116 ~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~ 195 (483)
+..|+..|.++|+|... + |.++|+|++..++|+|.|++||+ |..|+++++|.
T Consensus 38 t~~~~~~c~dideC~~~---p--C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~------------------- 89 (146)
T 1x7a_L 38 TNEFWKQYVDGDQCEPN---P--CLNGGLCKDDINSYECWCQVGFE----GKNCELDATCN------------------- 89 (146)
T ss_dssp ------------CCSSC---S--SCTTCEEEECSSCEEEECCSSEE----STTTCEECCTT-------------------
T ss_pred hhhhhccCCCcCcCCCC---C--CCCCCEeECCCCCEEEecCCCCc----CCcCCCCcccc-------------------
Confidence 35577889999999843 3 99999999999999999999999 66676555444
Q ss_pred cCCCCCCCeE-EeCCCCeEEeCCCCceeCCCCCcccccCc
Q psy11799 196 ELSNQCAFRC-HNVPGSFRCICPYGYALAPDGRHCIDINE 234 (483)
Q Consensus 196 ~~~~~C~~~C-~~~~gs~~C~C~~G~~~~~~g~~C~~~~~ 234 (483)
..+..|...| ++..++|+|.|++||++..+|.+|+++++
T Consensus 90 ~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 90 IKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVP 129 (146)
T ss_dssp SGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred CCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence 3344566689 89999999999999999989999987654
No 25
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.25 E-value=9.2e-12 Score=131.77 Aligned_cols=168 Identities=24% Similarity=0.486 Sum_probs=113.4
Q ss_pred cccCCCCCCCCeeeeCCCCce---EeCCCCceecCCCCCc----cccCccccCCC--Cccc--ccccCCCCeeEeCC---
Q psy11799 234 ECEQFPGLCAHTCTNTEGSYT---CGCHPGFELSSDGSGT----CLDSDECATGR--HICQ--QICNLLGGYKCGCP--- 299 (483)
Q Consensus 234 ~C~~~~~~~~~~C~~~~g~~~---C~C~~G~~~~~~g~~~----C~~~~~C~~~~--~~c~--~~C~~~g~~~C~C~--- 299 (483)
+|...|+.+++.|.+..+.+. |.|++||.|..+.... -...++|.... ..|. +.|. .+.|.|+
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~---~g~C~C~~~~ 512 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL---CGQCVCHSSD 512 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC---SSSEEECCCS
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE---CCeeEeecCC
Confidence 577778888888987777777 9999999954332100 00114565432 2343 5564 2689999
Q ss_pred -CCceeCCCCCccccCCcCCC---CCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCcee--eCCCccCC---C
Q psy11799 300 -EGYVRHPFSNECIDDNECAR---NPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCT--QLSSSCLS---S 370 (483)
Q Consensus 300 -~G~~g~~~~~~C~~~~~C~~---~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~--~~~~~C~~---~ 370 (483)
+||+|..|+ .+++.|.. .+|.+ +|+|++ +.|.|++||. |..|+ ...+.|.. .
T Consensus 513 ~~Gy~G~~Ce---~~~~~C~~~~~~~C~~--------~G~C~~----g~C~C~~Gy~----G~~CeC~~~~~~C~~~~g~ 573 (690)
T 3fcs_B 513 FGKITGKYCE---CDDFSCVRYKGEMCSG--------HGQCSC----GDCLCDSDWT----GYYCNCTTRTDTCMSSNGL 573 (690)
T ss_dssp SCCCBSTTSC---BCSSCCCBSSSSBGGG--------SEEEET----TEEEECTTEE----SSSSCEECCCTTTBCTTSS
T ss_pred CCCeeCCCcC---cccCcCcCCCCCCCCC--------CCEecC----CeeECcCCCc----CCCCccCCCCCcccCCCCC
Confidence 999998776 34566764 25665 899987 5999999995 55565 33347874 6
Q ss_pred CCCCCcEECCCCCeeEeC-CCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCe
Q psy11799 371 PCSFGCTPLGISGFSCEC-PSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSF 449 (483)
Q Consensus 371 ~C~~~c~~~~~~~~~C~C-~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~ 449 (483)
+|.++.++.. ++|.| ++||+|.. |+....|. .+|.++++|++
T Consensus 574 ~C~~~G~C~~---g~C~C~~~Gy~G~~-----------------------Ce~C~~C~------~~C~~~g~Cv~----- 616 (690)
T 3fcs_B 574 LCSGRGKCEC---GSCVCIQPGSYGDT-----------------------CEKCPTCP------DACTFKKECVE----- 616 (690)
T ss_dssp BTSSSCEEET---TEEECCSTTCBSTT-----------------------SCBCTTSC------CTTTSCCGGGT-----
T ss_pred CCCCCCEEeC---CEEECCCCCccCCC-----------------------cCcCCCCC------CCCCCCCCccc-----
Confidence 7988766653 48999 99998865 43323342 27889999875
Q ss_pred eeeCCCCcccCCCCCCCC
Q psy11799 450 RCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 450 ~C~C~~G~~~~~~g~~C~ 467 (483)
|..+| +|..|+
T Consensus 617 ---C~~g~----tG~~C~ 627 (690)
T 3fcs_B 617 ---CKKFD----RGALHD 627 (690)
T ss_dssp ---TTTTC----CSSSSS
T ss_pred ---CCCCC----ccCCCC
Confidence 89999 566554
No 26
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.24 E-value=1e-11 Score=96.30 Aligned_cols=82 Identities=40% Similarity=0.882 Sum_probs=64.9
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCC-CCCccccCCCCCCCCCccCCCccccccchhccCCCCCC-
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDR-TGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA- 202 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~-~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~- 202 (483)
|||+|... ++. |. +++|+++.++|+|.|++||++.. .+..| +++++|...+..|.
T Consensus 2 dideC~~~-~~~--C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C-------------------~dideC~~~~~~C~~ 58 (86)
T 1lmj_A 2 DIDECRIS-PDL--CG-RGQCVNTPGDFECKCDEGYESGFMMMKNC-------------------MDIDECQRDPLLCRG 58 (86)
T ss_dssp CCCTTTTC-SST--TT-TSCEEEETTEEEECCCSSEEECTTTSSSE-------------------EECCHHHHCSSTTTT
T ss_pred ccccccCC-CCC--CC-CCEEECCCCCEEeeCCCCcCccCCCCCcc-------------------CCcccccCCCCcCCC
Confidence 68999865 555 94 56999999999999999998652 24444 56667766666665
Q ss_pred CeEEeCCCCeEEeCCCCceeCCCCCcc
Q psy11799 203 FRCHNVPGSFRCICPYGYALAPDGRHC 229 (483)
Q Consensus 203 ~~C~~~~gs~~C~C~~G~~~~~~g~~C 229 (483)
+.|++..++|+|.|++||++..+++.|
T Consensus 59 ~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 59 GVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp SEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 799999999999999999987777665
No 27
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.23 E-value=1.3e-11 Score=94.69 Aligned_cols=76 Identities=51% Similarity=1.069 Sum_probs=58.8
Q ss_pred cccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCC
Q psy11799 123 FLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA 202 (483)
Q Consensus 123 C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~ 202 (483)
|+++|+|.. +++ |. +++|+++.++|+|.|++||+++ +..|+++++|... ..|.
T Consensus 2 C~dideC~~--~~~--C~-~g~C~n~~g~y~C~C~~Gy~~~--g~~C~dideC~~~--------------------~~C~ 54 (82)
T 1emn_A 2 AVDMDECKE--PDV--CK-HGQCINTDGSYRCECPFGYILA--GNECVDTDECSVG--------------------NPCG 54 (82)
T ss_dssp CCCCCSSSS--TTS--CS-SSEECCCSSCCCEECCTTEEEE--TTEEEECCGGGTC--------------------CTTS
T ss_pred CCccccCCC--CCC--cC-CCEEEecCCCEEEECCCCeECC--CCccCCcccccCC--------------------CCCC
Confidence 678999985 233 96 5899999999999999999873 6677766665432 1222
Q ss_pred -CeEEeCCCCeEEeCCCCceeCCC
Q psy11799 203 -FRCHNVPGSFRCICPYGYALAPD 225 (483)
Q Consensus 203 -~~C~~~~gs~~C~C~~G~~~~~~ 225 (483)
++|++..++|+|.|++||++..+
T Consensus 55 ~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 55 NGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp SSCEEECSSSEEECCSSSSCCCSS
T ss_pred CCEeECCCCCEEeECCCCeEeCCC
Confidence 68999999999999999985544
No 28
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.21 E-value=1.5e-11 Score=100.88 Aligned_cols=100 Identities=31% Similarity=0.622 Sum_probs=68.4
Q ss_pred cccccccccCCC------CccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhcc
Q psy11799 123 FLDMDECKEEIN------GVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLE 196 (483)
Q Consensus 123 C~~~~~C~~~~~------~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~ 196 (483)
+.|+|+|... | +. |.++|+|++..++|+|.|++||+ |..|+++. ++++|..
T Consensus 3 ~~d~d~C~~~-p~~~~C~~~--C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~----------------~~~~C~~ 59 (114)
T 1aut_L 3 HVDGDQCLVL-PLEHPCASL--CCGHGTCIDGIGSFSCDCRSGWE----GRFCQREV----------------SFLNCSL 59 (114)
T ss_dssp -----CCCCC-SSCCSSSST--TTTSEEECCCSSCCCEEECTTEE----STTSCEEC----------------CSSSSSS
T ss_pred ceecccccCC-Ccccccccc--CCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCC----------------cCCcCcC
Confidence 4577788765 3 22 88999999999999999999999 55565322 1234444
Q ss_pred CCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeee
Q psy11799 197 LSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTN 248 (483)
Q Consensus 197 ~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~ 248 (483)
.+..|..+|++..++|+|.|++||++..+++.|+++.+ .|+...+.++.
T Consensus 60 ~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~---~pC~~~~~~i~ 108 (114)
T 1aut_L 60 DNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK---FPCGRPWKRME 108 (114)
T ss_dssp GGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECSS---SCTTCCC----
T ss_pred CCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCcc---cCCCCCCccCC
Confidence 35556679999999999999999999888999976443 46665555543
No 29
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.20 E-value=6.2e-12 Score=97.74 Aligned_cols=83 Identities=39% Similarity=0.917 Sum_probs=65.6
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCCCe
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFR 204 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~ 204 (483)
++|+|... +.. | ++++|+++.++|+|.|++||++...+..|+ ++++|... .|.+.
T Consensus 2 dideC~~~-~~~--C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-------------------dideC~~~--~C~~~ 56 (87)
T 1z6c_A 2 DVDECSLK-PSI--C-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-------------------DIDECSEN--MCAQL 56 (87)
T ss_dssp CSCSSSSS-SSS--B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-------------------CCCHHHHS--CCSSE
T ss_pred ccccccCC-CCC--C-CCCEeECCCCCEEEECCCCceECCCCCcCC-------------------CcCeeCCC--CCCCE
Confidence 67899865 544 9 889999999999999999999877676665 45555543 35589
Q ss_pred EEeCCCCeEEeC--CCCceeCCCCCccccc
Q psy11799 205 CHNVPGSFRCIC--PYGYALAPDGRHCIDI 232 (483)
Q Consensus 205 C~~~~gs~~C~C--~~G~~~~~~g~~C~~~ 232 (483)
|++..++|+|.| .+||.+..++..|++|
T Consensus 57 C~n~~g~y~C~C~g~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 57 CVNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86 (87)
T ss_dssp ECCCSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred EEccCCCEEEECCCCcCCcccCCCCcceEC
Confidence 999999999999 5788777667777655
No 30
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.20 E-value=1.9e-11 Score=94.82 Aligned_cols=79 Identities=46% Similarity=0.954 Sum_probs=65.7
Q ss_pred ccchhccCCCCCC-CeEEeCCCCeEEeCCCCceeC-CCCCcccccCcccCCCCCC-CCeeeeCCCCceEeCCCCceecCC
Q psy11799 190 DINECLELSNQCA-FRCHNVPGSFRCICPYGYALA-PDGRHCIDINECEQFPGLC-AHTCTNTEGSYTCGCHPGFELSSD 266 (483)
Q Consensus 190 ~~~~C~~~~~~C~-~~C~~~~gs~~C~C~~G~~~~-~~g~~C~~~~~C~~~~~~~-~~~C~~~~g~~~C~C~~G~~~~~~ 266 (483)
++++|...+..|. +.|++..++|+|.|++||++. .++..|+++++|...++.+ +++|+++.++|+|.|++||++...
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSS
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCC
Confidence 5677776666665 689999999999999999865 3478999999999877554 579999999999999999997765
Q ss_pred CC
Q psy11799 267 GS 268 (483)
Q Consensus 267 g~ 268 (483)
+.
T Consensus 82 ~~ 83 (86)
T 1lmj_A 82 IS 83 (86)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 31
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.18 E-value=9.7e-12 Score=110.95 Aligned_cols=92 Identities=32% Similarity=0.762 Sum_probs=34.1
Q ss_pred cccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCcccccc-ch
Q psy11799 115 KKKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDI-NE 193 (483)
Q Consensus 115 ~~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~-~~ 193 (483)
.+..|+..|.++++|... | |.++|+|++..++|+|.|++||+ |..|+. ++ ++
T Consensus 31 ~t~~fw~~c~dideC~~~-p----C~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~------------------~i~de 83 (195)
T 1nfu_B 31 KTNEFWNKYKDGDQCETS-P----CQNQGKCKDGLGEYTCTCLEGFE----GKNCEL------------------FTRKL 83 (195)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ccccccccCCCCcccCCC-C----CCCCCEeECCCCCeeEeCCCCce----eccccc------------------ccccc
Confidence 455678889999999853 3 99999999999999999999998 666753 12 34
Q ss_pred hccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccC
Q psy11799 194 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 194 C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
|...+..|...|++..++|+|.|++||++..+|..|+++.
T Consensus 84 C~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 84 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp GGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred ccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 4444556667999999999999999999999999997654
No 32
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.16 E-value=9.9e-12 Score=104.95 Aligned_cols=92 Identities=32% Similarity=0.762 Sum_probs=33.5
Q ss_pred cccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCcccccc-ch
Q psy11799 115 KKKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDI-NE 193 (483)
Q Consensus 115 ~~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~-~~ 193 (483)
.+..|+..|.++|+|... | |.++|+|++..++|+|.|++||+ |..|+. .+ ++
T Consensus 31 ~~~~~~~~c~d~d~C~~~-p----C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~------------------~i~d~ 83 (134)
T 2vh0_B 31 KTNEFWNKYKDGDQCETS-P----CQNQGKCKDGLGEYTCTCLEGFE----GKNCEL------------------FTRKL 83 (134)
T ss_dssp -----------------------------------------------------------------------------CCG
T ss_pred ccccccccCCCcCcCCCC-C----CCCcCCcccCCCCEEeeCCCCcc----CCcccc------------------CCCCc
Confidence 455678889999999854 3 99999999999999999999998 556653 12 34
Q ss_pred hccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccC
Q psy11799 194 CLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 194 C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
|...+..|...|++..++|+|.|++||++..+|+.|++++
T Consensus 84 C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 84 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp GGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred cccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 4443455667899999999999999999998999997654
No 33
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.16 E-value=5.4e-11 Score=91.25 Aligned_cols=73 Identities=38% Similarity=0.968 Sum_probs=63.4
Q ss_pred cccCCcCCC-CCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeCCCccC-CCCCCCC-cEECCCCCeeEe
Q psy11799 311 CIDDNECAR-NPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQLSSSCL-SSPCSFG-CTPLGISGFSCE 387 (483)
Q Consensus 311 C~~~~~C~~-~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~-~~~C~~~-c~~~~~~~~~C~ 387 (483)
|+++++|.. ++|.+ ++|+++.++|+|.|++||++ .++.|++++ +|. .++|.++ |+... ++|+|.
T Consensus 2 C~dideC~~~~~C~~---------g~C~n~~g~y~C~C~~Gy~~--~g~~C~did-eC~~~~~C~~~~C~n~~-g~y~C~ 68 (82)
T 1emn_A 2 AVDMDECKEPDVCKH---------GQCINTDGSYRCECPFGYIL--AGNECVDTD-ECSVGNPCGNGTCKNVI-GGFECT 68 (82)
T ss_dssp CCCCCSSSSTTSCSS---------SEECCCSSCCCEECCTTEEE--ETTEEEECC-GGGTCCTTSSSCEEECS-SSEEEC
T ss_pred CCccccCCCCCCcCC---------CEEEecCCCEEEECCCCeEC--CCCccCCcc-cccCCCCCCCCEeECCC-CCEEeE
Confidence 678899986 78864 79999999999999999987 578998887 998 7899865 88887 899999
Q ss_pred CCCCeeecC
Q psy11799 388 CPSGYQRIG 396 (483)
Q Consensus 388 C~~Gy~g~~ 396 (483)
|++||+|..
T Consensus 69 C~~G~~g~~ 77 (82)
T 1emn_A 69 CEEGFEPGP 77 (82)
T ss_dssp CSSSSCCCS
T ss_pred CCCCeEeCC
Confidence 999999865
No 34
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.16 E-value=6e-11 Score=125.54 Aligned_cols=141 Identities=23% Similarity=0.495 Sum_probs=98.3
Q ss_pred cccCCCCcccccc-cCCCCee---EeCCCCceeCCCCCcc-----ccCCcCCCC----CCCCCCCCCCCCCCEEeeCCCC
Q psy11799 276 ECATGRHICQQIC-NLLGGYK---CGCPEGYVRHPFSNEC-----IDDNECARN----PCEPSSNTTGERGGKCFNTAGS 342 (483)
Q Consensus 276 ~C~~~~~~c~~~C-~~~g~~~---C~C~~G~~g~~~~~~C-----~~~~~C~~~----~C~~~~~~~c~~~g~C~~~~g~ 342 (483)
+|...+....+.| +..|.|. |.|++||+|..|+..- ...++|... +|.+ +|+|++
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~--------~G~C~~---- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQ--------RGECLC---- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGG--------SEEECS----
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCC--------CCEEEC----
Confidence 4555444445677 4777787 9999999999886221 011445542 3555 999984
Q ss_pred eeEECC----CCCeeccCCCceeeCCCccCC---CCCCCCcEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccC
Q psy11799 343 YRCGCP----DGFQFEAALQLCTQLSSSCLS---SPCSFGCTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSY 415 (483)
Q Consensus 343 ~~C~C~----~G~~~~~~g~~C~~~~~~C~~---~~C~~~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~ 415 (483)
+.|.|+ +|| .|..|+.....|.. .+|.+++++.. ++|.|++||+|..
T Consensus 504 g~C~C~~~~~~Gy----~G~~Ce~~~~~C~~~~~~~C~~~G~C~~---g~C~C~~Gy~G~~------------------- 557 (690)
T 3fcs_B 504 GQCVCHSSDFGKI----TGKYCECDDFSCVRYKGEMCSGHGQCSC---GDCLCDSDWTGYY------------------- 557 (690)
T ss_dssp SSEEECCCSSCCC----BSTTSCBCSSCCCBSSSSBGGGSEEEET---TEEEECTTEESSS-------------------
T ss_pred CeeEeecCCCCCe----eCCCcCcccCcCcCCCCCCCCCCCEecC---CeeECcCCCcCCC-------------------
Confidence 499999 999 67778754447874 47887766643 8999999999876
Q ss_pred CCCCcc---cccccccCCCCccCCCCCCeEeeCCCCeeeeC-CCCcccCCCCCCCCC
Q psy11799 416 ERPNLG---DIDECKEEINGVAVCPKPGTCINTMGSFRCLC-PRGFKLDRTGTFCLD 468 (483)
Q Consensus 416 ~~~~C~---~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C-~~G~~~~~~g~~C~~ 468 (483)
|. ++++|.... ..+|.++|+|++. +|.| ++|| .|..|+.
T Consensus 558 ----CeC~~~~~~C~~~~--g~~C~~~G~C~~g----~C~C~~~Gy----~G~~Ce~ 600 (690)
T 3fcs_B 558 ----CNCTTRTDTCMSSN--GLLCSGRGKCECG----SCVCIQPGS----YGDTCEK 600 (690)
T ss_dssp ----SCEECCCTTTBCTT--SSBTSSSCEEETT----EEECCSTTC----BSTTSCB
T ss_pred ----CccCCCCCcccCCC--CCCCCCCCEEeCC----EEECCCCCc----cCCCcCc
Confidence 33 456675421 1289999999762 7999 9999 6777875
No 35
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.16 E-value=5e-11 Score=120.00 Aligned_cols=127 Identities=24% Similarity=0.587 Sum_probs=92.8
Q ss_pred CeeEeCCCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceeeC-C-------
Q psy11799 293 GYKCGCPEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQL-S------- 364 (483)
Q Consensus 293 ~~~C~C~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~-~------- 364 (483)
.+.|.|++||+|..|... | .+|.+ +|+|.+ +++.|.|++||.| ..|+.. .
T Consensus 184 ~~~c~C~~g~~G~~C~~~------C--~~C~~--------~G~C~~--~~g~C~C~~G~~G----~~Ce~~C~~g~~g~~ 241 (423)
T 2gy5_A 184 LIVRRCEAQKWGPECNHL------C--TACMN--------NGVCHE--DTGECICPPGFMG----RTCEKACELHTFGRT 241 (423)
T ss_dssp EEECSSCTTEESTTSCEE------C--CCCCT--------TCEECT--TTCCEECCTTEES----TTSCEECCTTEESTT
T ss_pred ccCCcCCCCCCCCCCCCC------C--CCCCC--------CCEEEC--CCCcEeCCCCccC----CCcccccCCCCCCCC
Confidence 346889999999766532 3 26777 899987 4569999999954 555532 1
Q ss_pred --CccC-CCCCCCCcEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCe
Q psy11799 365 --SSCL-SSPCSFGCTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGT 441 (483)
Q Consensus 365 --~~C~-~~~C~~~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~ 441 (483)
+.|. ..+|.++..+.. +.|+|.|++||+|.. |.. .|++||+|.. |.. .| +|.++++
T Consensus 242 C~~~C~~~~~C~~~g~C~~-~~~~C~C~~G~~G~~---C~~----~C~~G~~G~~---C~~--~C--------~C~ngg~ 300 (423)
T 2gy5_A 242 CKERCSGQEGCKSYVFCLP-DPYGCSCATGWKGLQ---CNE----ACHPGFYGPD---CKL--RC--------SCNNGEM 300 (423)
T ss_dssp SCEECCSTTTTTTCCEEET-TTTEEECCBTCBSGG---GCB----CCCTTBCSBT---TCC--BC--------CCTTCCE
T ss_pred cCccCCCCCCCCCCCEECC-CCCeEEeCCCccccc---ccC----ccCCCCcCCc---ccc--cc--------cCCCCCE
Confidence 1344 456777666665 789999999999875 322 6899999976 542 23 6899999
Q ss_pred EeeCCCCeeeeCCCCcccCCCCCCCCCC
Q psy11799 442 CINTMGSFRCLCPRGFKLDRTGTFCLDQ 469 (483)
Q Consensus 442 C~~~~g~~~C~C~~G~~~~~~g~~C~~~ 469 (483)
|.+..+ |.|++|| .|..|+..
T Consensus 301 C~~~~~---C~C~~G~----~G~~Ce~~ 321 (423)
T 2gy5_A 301 CDRFQG---CLCSPGW----QGLQCERE 321 (423)
T ss_dssp EETTTE---EECCTTC----BSTTSCBC
T ss_pred ecCCCc---eECCCCC----cCCCCccC
Confidence 997653 9999999 77788753
No 36
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.14 E-value=5.7e-11 Score=101.39 Aligned_cols=93 Identities=30% Similarity=0.719 Sum_probs=72.1
Q ss_pred cCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCcccc-CCCCCCCCCccCCCccccccchhc
Q psy11799 117 KKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLD-QDECTDDSKCREGCQTCEDINECL 195 (483)
Q Consensus 117 ~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~-~~~C~~~~~C~~g~~~C~~~~~C~ 195 (483)
..|+..|.++|+|... | |.++|+|++..++|+|.|++||+ |..|+. +++|.. |.
T Consensus 38 ~~f~~~c~did~C~~~-p----C~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~----------------c~ 92 (142)
T 2c4f_L 38 KLFWISYSDGDQCASS-P----CQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLI----------------CV 92 (142)
T ss_dssp HHHHHHHTTCCGGGGC-C----CCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCS----------------TT
T ss_pred ccccccCCccCcCcCC-C----cCCCCEEeCCCCCEEeeCCCCcc----CCccccCcccccc----------------cc
Confidence 3566778899999854 3 99999999999999999999998 666763 333321 11
Q ss_pred cCCCCCCCeEEeCCC-CeEEeCCCCceeCCCCCcccccCc
Q psy11799 196 ELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINE 234 (483)
Q Consensus 196 ~~~~~C~~~C~~~~g-s~~C~C~~G~~~~~~g~~C~~~~~ 234 (483)
..+..|...|++..+ +|+|.|++||++..+|++|+++++
T Consensus 93 ~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 93 NENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp TGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 113345568999999 999999999999999999987665
No 37
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.12 E-value=3.1e-11 Score=93.79 Aligned_cols=82 Identities=38% Similarity=0.867 Sum_probs=65.2
Q ss_pred ccchhccCCCCC-CCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeC--CCCceecCC
Q psy11799 190 DINECLELSNQC-AFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGC--HPGFELSSD 266 (483)
Q Consensus 190 ~~~~C~~~~~~C-~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C--~~G~~~~~~ 266 (483)
++++|...+..| .+.|++..++|+|.|++||++..+++.|+++++|...+|. ++|+++.++|+|.| .+||.+...
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~~~~~~ 79 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCDGKKGFKLAQD 79 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECCSSSCCBCCTT
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECCCCcCCcccCC
Confidence 456666666545 4889999999999999999988889999999999887765 79999999999999 467665544
Q ss_pred CCCccccC
Q psy11799 267 GSGTCLDS 274 (483)
Q Consensus 267 g~~~C~~~ 274 (483)
+. .|.++
T Consensus 80 ~~-~C~di 86 (87)
T 1z6c_A 80 QK-SCEVV 86 (87)
T ss_dssp SS-SCBCC
T ss_pred CC-cceEC
Confidence 43 45443
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.06 E-value=1.7e-10 Score=98.66 Aligned_cols=84 Identities=24% Similarity=0.572 Sum_probs=66.6
Q ss_pred ccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCee-eeCCCCceEeCCCCceecCC
Q psy11799 188 CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTC-TNTEGSYTCGCHPGFELSSD 266 (483)
Q Consensus 188 C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C-~~~~g~~~C~C~~G~~~~~~ 266 (483)
|.++++|..+++..+++|++..++|+|.|++||+ |..|+++++|...+..+.++| +++.++|+|.|++||++...
T Consensus 45 c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 45 YVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp -----CCSSCSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTT
T ss_pred CCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCC
Confidence 4555666555554458999999999999999999 999998899987666666699 99999999999999998877
Q ss_pred CCCccccCcc
Q psy11799 267 GSGTCLDSDE 276 (483)
Q Consensus 267 g~~~C~~~~~ 276 (483)
+. .|.++++
T Consensus 121 G~-~C~~~~~ 129 (146)
T 1x7a_L 121 QK-SCKPAVP 129 (146)
T ss_dssp SS-SEEECSS
T ss_pred CC-cCCCCCC
Confidence 77 7877654
No 39
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.05 E-value=7.5e-11 Score=95.18 Aligned_cols=87 Identities=34% Similarity=0.853 Sum_probs=37.2
Q ss_pred ccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhc
Q psy11799 116 KKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECL 195 (483)
Q Consensus 116 ~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~ 195 (483)
..+++..| ++++|... ++. | .++|++..++|+|.|++||++. .+..|+++++|..
T Consensus 20 ~~~~~~~C-d~neC~~~-~~~--C--~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~------------------ 74 (107)
T 2w2n_E 20 NLYFQGAM-GTNECLDN-NGG--C--SYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD------------------ 74 (107)
T ss_dssp CCCCSCCB-SCCGGGTG-GGG--C--SSEEECCSBSCEEECCTTCEEE-TTTEEEC------------------------
T ss_pred CCcCCCCC-cCccCcCC-CCC--C--CCEeEeCCCCeEEECCCCcccc-CCCccccccccCC------------------
Confidence 44557778 68999854 344 8 3699999999999999999974 2456665554432
Q ss_pred cCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcc
Q psy11799 196 ELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHC 229 (483)
Q Consensus 196 ~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C 229 (483)
+..|.+.|++..++|+|.|++||++..+++.|
T Consensus 75 --~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 75 --PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp ----------------------------------
T ss_pred --CCCcCCeeecCCCCEEEECCCCceECCCCCcc
Confidence 23455789999999999999999977766665
No 40
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.05 E-value=2e-10 Score=89.85 Aligned_cols=82 Identities=23% Similarity=0.467 Sum_probs=64.7
Q ss_pred CceEeCCCCceecCCCCCccccCccccCCCCcccccc-cCCCCeeEeCCCCceeCCCCCccc--cCCcCCCCCCCCCCCC
Q psy11799 252 SYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQIC-NLLGGYKCGCPEGYVRHPFSNECI--DDNECARNPCEPSSNT 328 (483)
Q Consensus 252 ~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C-~~~g~~~C~C~~G~~g~~~~~~C~--~~~~C~~~~C~~~~~~ 328 (483)
+|+|.|.+||+ +. .| ++++|... .| +..++|+|.|++||+ .|+ ++++|..+||.+
T Consensus 1 sy~C~C~~g~~----g~-~c-~~~~c~~~------pC~n~~~~y~C~C~~G~~------~C~~~~~~~C~~~pC~n---- 58 (91)
T 1tpg_A 1 SYQVICRDEKT----QM-IY-QQHQSWLR------PVLRSNRVEYCWCNSGRA------QCHSVPVKSCSEPRCFN---- 58 (91)
T ss_dssp CCCCCCBCSSS----CC-BC-CSSCEEEE------ECSSSSCEEEEECSSSCC------BCCEECEEECSSCCSCT----
T ss_pred CeeeECCCCCc----CC-eE-CCCcccCC------ccccCCCCcEeECCCCCc------ccccCcCCcccCCCCCC----
Confidence 48899999998 44 44 45666433 23 557889999999996 454 688999999998
Q ss_pred CCCCCCEEeeCC--CCeeEECCCCCeeccCCCceeeC
Q psy11799 329 TGERGGKCFNTA--GSYRCGCPDGFQFEAALQLCTQL 363 (483)
Q Consensus 329 ~c~~~g~C~~~~--g~~~C~C~~G~~~~~~g~~C~~~ 363 (483)
+|+|++.. ++|+|.|++|| .|+.|+..
T Consensus 59 ----gg~C~~~~~~~~~~C~C~~G~----~G~~Ce~~ 87 (91)
T 1tpg_A 59 ----GGTCQQALYFSDFVCQCPEGF----AGKSCEID 87 (91)
T ss_dssp ----TCEEEEESSSSCEEEECCTTC----BSSSCCBC
T ss_pred ----CCEeecCCCCCCeEeECCCCC----cCCcCCcC
Confidence 89999987 89999999999 66778643
No 41
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.96 E-value=1e-09 Score=89.87 Aligned_cols=95 Identities=26% Similarity=0.592 Sum_probs=68.3
Q ss_pred ccccCcccCCC--------CCCCCeeeeCCCCceEeCCCCceecCCCCCccccC---ccccCCCCcccccc-cCCCCeeE
Q psy11799 229 CIDINECEQFP--------GLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDS---DECATGRHICQQIC-NLLGGYKC 296 (483)
Q Consensus 229 C~~~~~C~~~~--------~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~---~~C~~~~~~c~~~C-~~~g~~~C 296 (483)
++++++|...| +.++++|+++.++|+|.|++||+ +. .|+++ ++|......|...| +..++|+|
T Consensus 3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~----G~-~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C 77 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE----GR-FCQREVSFLNCSLDNGGCTHYCLEEVGWRRC 77 (114)
T ss_dssp -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE----ST-TSCEECCSSSSSSGGGGCSSEEEECSSSEEE
T ss_pred ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc----CC-CcCcCCcCCcCcCCCCCCCCEeECCCCCEEe
Confidence 45678888888 88889999999999999999999 44 46543 46876656677788 88899999
Q ss_pred eCCCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEEeeC
Q psy11799 297 GCPEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKCFNT 339 (483)
Q Consensus 297 ~C~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C~~~ 339 (483)
.|++||+|...+..|+++. ..||.+ ++.++..
T Consensus 78 ~C~~G~~~~~~g~~C~~~~---~~pC~~--------~~~~i~~ 109 (114)
T 1aut_L 78 SCAPGYKLGDDLLQCHPAV---KFPCGR--------PWKRMEK 109 (114)
T ss_dssp ECCTTEEECTTSSCEEECS---SSCTTC--------CC-----
T ss_pred ECCCCeeECCCCCccCcCc---ccCCCC--------CCccCCC
Confidence 9999999988888887643 347766 5666544
No 42
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.91 E-value=4.1e-10 Score=117.37 Aligned_cols=99 Identities=22% Similarity=0.328 Sum_probs=30.9
Q ss_pred CeeE-ECCCCCeeccCCCceeeCCCccCCCCCCCC------cEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCccc
Q psy11799 342 SYRC-GCPDGFQFEAALQLCTQLSSSCLSSPCSFG------CTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRS 414 (483)
Q Consensus 342 ~~~C-~C~~G~~~~~~g~~C~~~~~~C~~~~C~~~------c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g 414 (483)
++.| .|++||.+ ..|+... .|...+|.+. ..+.. ..+.|.|++||+|.... .|.+||+|
T Consensus 417 G~~C~~C~~Gy~G----~~c~~~~-~C~~C~C~~~gtc~~~~~Cd~-~tg~C~C~~g~~G~~Ce--------~C~~G~~g 482 (525)
T 4aqs_A 417 GERCDVCKEGFYD----LSAEDPY-GCKSCACNPLGTIPGGNPCDS-ETGYCYCKRLVTGQRCD--------QCLPQHWG 482 (525)
T ss_dssp TTTTCEECTTEEC----CCTTSTT-SSEECCCCTTTBCCSSCCBCT-TTCCBCBCTTCCSTTTC--------C-------
T ss_pred CCcccCCCCCCcC----CCCCCCC-CCccCCCCCCceecCCCcccC-CCCEEECCCCCcCCCcc--------cCCCCccC
Confidence 3445 68888854 3333333 4555556543 22333 56789999999998633 47788887
Q ss_pred CCCCCcccccccccCCCCccCCCCCCeEeeC--CCCeeeeCCCCcccCCCCCCCC
Q psy11799 415 YERPNLGDIDECKEEINGVAVCPKPGTCINT--MGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 415 ~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~--~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
.. .+++.|..- +|.+++.+.+. ..+++|+|++|| .|..|+
T Consensus 483 ~~----~~~~~C~~C-----~C~~~gs~~~~C~~~tG~C~C~~G~----~G~~Ce 524 (525)
T 4aqs_A 483 LS----NDLDGCRPC-----DCDLGGALNNSCSEDSGQCSCLPHM----IGRQCN 524 (525)
T ss_dssp -------------------------------------------------------
T ss_pred CC----CCCCCCcCC-----CCCCCCccCCccCCCCCeeECCCCC----cCCCCC
Confidence 64 345666543 68787776543 334579999999 788876
No 43
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.90 E-value=3.3e-09 Score=106.71 Aligned_cols=126 Identities=26% Similarity=0.561 Sum_probs=74.9
Q ss_pred CeEEeCCCCeEEeCCCCceeCCCCCccccc-----------Cccc-CCCCCCCCeeeeCCCCceEeCCCCceecCCCCCc
Q psy11799 203 FRCHNVPGSFRCICPYGYALAPDGRHCIDI-----------NECE-QFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGT 270 (483)
Q Consensus 203 ~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~-----------~~C~-~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~ 270 (483)
+.|.+ ++++|.|++||+ |.+|+.. +.|. ..+|..++.|. .+.++|.|++||. |. .
T Consensus 209 G~C~~--~~g~C~C~~G~~----G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~----G~-~ 275 (423)
T 2gy5_A 209 GVCHE--DTGECICPPGFM----GRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWK----GL-Q 275 (423)
T ss_dssp CEECT--TTCCEECCTTEE----STTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCB----SG-G
T ss_pred CEEEC--CCCcEeCCCCcc----CCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcc----cc-c
Confidence 67865 456999999999 8888631 1222 22344445553 4566777777776 43 3
Q ss_pred cccCccccCCCCcccccccCCCCeeEeCCCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCC
Q psy11799 271 CLDSDECATGRHICQQICNLLGGYKCGCPEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDG 350 (483)
Q Consensus 271 C~~~~~C~~~~~~c~~~C~~~g~~~C~C~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G 350 (483)
|.. .|.+||+|..|.. .| +|.+ +++|.+.. .|.|++|
T Consensus 276 C~~-----------------------~C~~G~~G~~C~~------~C---~C~n--------gg~C~~~~---~C~C~~G 312 (423)
T 2gy5_A 276 CNE-----------------------ACHPGFYGPDCKL------RC---SCNN--------GEMCDRFQ---GCLCSPG 312 (423)
T ss_dssp GCB-----------------------CCCTTBCSBTTCC------BC---CCTT--------CCEEETTT---EEECCTT
T ss_pred ccC-----------------------ccCCCCcCCcccc------cc---cCCC--------CCEecCCC---ceECCCC
Confidence 321 3567777655432 12 5666 89998764 4999999
Q ss_pred CeeccCCCceeeCCCccCCCCCCCCcEECCCCCeeEeCCCCeeec
Q psy11799 351 FQFEAALQLCTQLSSSCLSSPCSFGCTPLGISGFSCECPSGYQRI 395 (483)
Q Consensus 351 ~~~~~~g~~C~~~~~~C~~~~C~~~c~~~~~~~~~C~C~~Gy~g~ 395 (483)
| .|..|+..... ...+ .. .. ....|.|.+||.|.
T Consensus 313 ~----~G~~Ce~~~~~-~~~~----~~-~~-~~~~~~c~~g~~g~ 346 (423)
T 2gy5_A 313 W----QGLQCEREGIP-RMTP----KI-VD-LPDHIEVNSGKFNP 346 (423)
T ss_dssp C----BSTTSCBCSSC-CCCC----EE-CS-CCSBCCEESEEECC
T ss_pred C----cCCCCccCccC-CcCc----ce-ec-CCCeEEeCCCccCC
Confidence 9 56667653211 0111 11 11 23357788888774
No 44
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.90 E-value=4.7e-10 Score=90.48 Aligned_cols=76 Identities=36% Similarity=0.928 Sum_probs=32.7
Q ss_pred ccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccC-CCCCCCCeeeeCCCCceEeCCCCceecCCCC
Q psy11799 190 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQ-FPGLCAHTCTNTEGSYTCGCHPGFELSSDGS 268 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~-~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~ 268 (483)
++++|...+..|.+.|++..++|+|.|++||++. ++..|+++++|.. .+| .++|+++.++|.|.|++||.+...+.
T Consensus 28 d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~~~~C--~~~C~n~~gsy~C~C~~Gy~~~~d~~ 104 (107)
T 2w2n_E 28 GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDPHTK 104 (107)
T ss_dssp SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC--------------------------------------
T ss_pred cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccCCCCCc--CCeeecCCCCEEEECCCCceECCCCC
Confidence 4556665555677899999999999999999953 3589999999974 454 47999999999999999999766554
No 45
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.87 E-value=2.2e-09 Score=116.59 Aligned_cols=84 Identities=36% Similarity=0.918 Sum_probs=70.2
Q ss_pred cchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCc
Q psy11799 191 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGT 270 (483)
Q Consensus 191 ~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~ 270 (483)
+++|...+..|.+.|++..++|+|.|++||.+ .+++.|+++++|. .+..+.+.|+++.++|+|.|++||.+...+. .
T Consensus 312 ~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~-~ 388 (791)
T 3m0c_C 312 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-A 388 (791)
T ss_dssp CCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCC-C
T ss_pred cccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCc-e
Confidence 34565556667789999999999999999987 5689999999998 4566778999999999999999999877776 7
Q ss_pred cccCccc
Q psy11799 271 CLDSDEC 277 (483)
Q Consensus 271 C~~~~~C 277 (483)
|.+++++
T Consensus 389 C~~~~~~ 395 (791)
T 3m0c_C 389 CKAVGSI 395 (791)
T ss_dssp CEETTSC
T ss_pred eeecccc
Confidence 8776554
No 46
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.86 E-value=4.6e-09 Score=89.43 Aligned_cols=84 Identities=25% Similarity=0.564 Sum_probs=66.2
Q ss_pred ccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccc-cCcccCCCCCC---CCeeeeCCC-CceEeCCCCce
Q psy11799 188 CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-INECEQFPGLC---AHTCTNTEG-SYTCGCHPGFE 262 (483)
Q Consensus 188 C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~-~~~C~~~~~~~---~~~C~~~~g-~~~C~C~~G~~ 262 (483)
|.++++|..+++..+++|++..++|+|.|++||+ |+.|++ +++|...++.. .++|+++.+ +|+|.|++||+
T Consensus 44 c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 44 YSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp HTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred CCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCce
Confidence 4567777766655558999999999999999999 999975 56654333333 349999999 99999999999
Q ss_pred ecCCCCCccccCcc
Q psy11799 263 LSSDGSGTCLDSDE 276 (483)
Q Consensus 263 ~~~~g~~~C~~~~~ 276 (483)
+...+. .|.++++
T Consensus 120 l~~dG~-~C~~~~e 132 (142)
T 2c4f_L 120 LLADGV-SCTPTVE 132 (142)
T ss_dssp ECTTSS-CEEESSS
T ss_pred ECCCCC-CCCCCCc
Confidence 887777 7877654
No 47
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.85 E-value=9e-10 Score=92.84 Aligned_cols=83 Identities=25% Similarity=0.669 Sum_probs=34.4
Q ss_pred ccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccc-c-CcccCCCCCCCCeeeeCCCCceEeCCCCceecC
Q psy11799 188 CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-I-NECEQFPGLCAHTCTNTEGSYTCGCHPGFELSS 265 (483)
Q Consensus 188 C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~-~-~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~ 265 (483)
|.++++|..+++..+++|++..++|+|.|++||+ |..|++ + ++|...+..+.++|+++.++|+|.|++||++..
T Consensus 39 c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECT
T ss_pred CCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECC
Confidence 4455666555544448999999999999999999 999976 6 889876666666999999999999999999887
Q ss_pred CCCCccccCc
Q psy11799 266 DGSGTCLDSD 275 (483)
Q Consensus 266 ~g~~~C~~~~ 275 (483)
.+. .|.+++
T Consensus 115 ~g~-~C~~~~ 123 (134)
T 2vh0_B 115 NGK-ACIPTG 123 (134)
T ss_dssp TSS-CEEESS
T ss_pred CCC-ccCcCC
Confidence 776 776553
No 48
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.81 E-value=7.9e-09 Score=111.41 Aligned_cols=138 Identities=28% Similarity=0.700 Sum_probs=96.0
Q ss_pred CeEEeCCCCeEEe----CCCCceeCCCCCcccccCccc-C--CCCCCCCeeeeCCC--CceEeCCCCceecCCCCCcccc
Q psy11799 203 FRCHNVPGSFRCI----CPYGYALAPDGRHCIDINECE-Q--FPGLCAHTCTNTEG--SYTCGCHPGFELSSDGSGTCLD 273 (483)
Q Consensus 203 ~~C~~~~gs~~C~----C~~G~~~~~~g~~C~~~~~C~-~--~~~~~~~~C~~~~g--~~~C~C~~G~~~~~~g~~~C~~ 273 (483)
+.|+. .++.|. |..|.. +..|..+..|. . .+|. ++.|++... .+.+.|..|+... .. .| +
T Consensus 225 g~Ci~--~~~~Cdg~~dC~dgsd----e~~C~~~~~C~~~~~~~C~-~g~Ci~~~~~Cd~~~dC~dgsDe~--~~-~C-~ 293 (699)
T 1n7d_A 225 GNCIH--GSRQCDREYDCKDMSD----EVGCVNVTLCEGPNKFKCH-SGECITLDKVCNMARDCRDWSDEP--IK-EC-G 293 (699)
T ss_dssp SCEEE--TTCCSSSCCCSSSSCS----SSSTTCCCCCCSTTCCCCT-TSCCCCSSCCSCSSCCSSSSCSCC--CS-SC-C
T ss_pred Cceee--eecccCCCCCCCCCCc----cCCCCCCCcccCCCceecC-CCcEeCCcccccccceecCccccc--cc-cc-c
Confidence 56665 345664 655554 66776555663 2 2232 356765422 2345677765421 11 34 5
Q ss_pred CccccCCCCcccccc-cCCCCeeEeCCCCceeCCCCCccccCCcCCC-CCCCCCCCCCCCCCCEEeeCCCCeeEECCCCC
Q psy11799 274 SDECATGRHICQQIC-NLLGGYKCGCPEGYVRHPFSNECIDDNECAR-NPCEPSSNTTGERGGKCFNTAGSYRCGCPDGF 351 (483)
Q Consensus 274 ~~~C~~~~~~c~~~C-~~~g~~~C~C~~G~~g~~~~~~C~~~~~C~~-~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~ 351 (483)
+++|......|.+.| +..++|.|.|++||.+ .....|+++++|.. .+|.+ +|+++.++|+|.|++||
T Consensus 294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C~~----------~C~n~~g~y~C~C~~G~ 362 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQ----------LCVNLEGGYKCQCEEGF 362 (699)
T ss_dssp CCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSCTT----------TCCBCSSCBCCCCCSSC
T ss_pred cccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCcccc----------ccccCCCCeeeeeeccc
Confidence 788988777788888 8889999999999997 44578899999974 57754 79999999999999999
Q ss_pred eeccCCCceee
Q psy11799 352 QFEAALQLCTQ 362 (483)
Q Consensus 352 ~~~~~g~~C~~ 362 (483)
++...++.|..
T Consensus 363 ~~~~~~~~C~~ 373 (699)
T 1n7d_A 363 QLDPHTKACKA 373 (699)
T ss_dssp BCCSSCCCCBC
T ss_pred ccCCCCCcccc
Confidence 99877777763
No 49
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.81 E-value=1.4e-09 Score=97.01 Aligned_cols=82 Identities=26% Similarity=0.677 Sum_probs=34.6
Q ss_pred ccccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccc-c-CcccCCCCCCCCeeeeCCCCceEeCCCCceecC
Q psy11799 188 CEDINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID-I-NECEQFPGLCAHTCTNTEGSYTCGCHPGFELSS 265 (483)
Q Consensus 188 C~~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~-~-~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~ 265 (483)
|.++++|...++..++.|++..++|+|.|++||+ |..|++ + ++|...+..+.++|+++.++|+|.|++||++..
T Consensus 39 c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECT
T ss_pred CCCCcccCCCCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCC
Confidence 4556666655544448999999999999999999 999976 5 889876666666999999999999999999887
Q ss_pred CCCCccccC
Q psy11799 266 DGSGTCLDS 274 (483)
Q Consensus 266 ~g~~~C~~~ 274 (483)
.+. .|.++
T Consensus 115 dG~-~C~~~ 122 (195)
T 1nfu_B 115 NGK-ACIPT 122 (195)
T ss_dssp TSS-CEEES
T ss_pred CCC-ccccC
Confidence 777 77765
No 50
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.75 E-value=6.6e-09 Score=109.67 Aligned_cols=136 Identities=21% Similarity=0.508 Sum_probs=89.0
Q ss_pred eeEeCCCCceeCCCCCccccC--------CcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECC------CCCeeccCCCc
Q psy11799 294 YKCGCPEGYVRHPFSNECIDD--------NECARNPCEPSSNTTGERGGKCFNTAGSYRCGCP------DGFQFEAALQL 359 (483)
Q Consensus 294 ~~C~C~~G~~g~~~~~~C~~~--------~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~------~G~~~~~~g~~ 359 (483)
..|.|++||+|..|+ |... ..|...+ ....|.++|+|+. + +|.|+ +|| .|..
T Consensus 446 g~C~C~~Gy~G~~Ce--c~~~~~~~~~~~~~C~~~~----~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~----~G~~ 511 (687)
T 3k6s_B 446 GICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDN----NSIICSGLGDCVC--G--QCLCHTSDVPGKLI----YGQY 511 (687)
T ss_dssp SSEEECSSEESTTSC--EESSSCCCSGGGSTTSSST----TSCGGGSSEEEET--T--EEEECCCCSTTCCE----ESTT
T ss_pred CEeEcCCCCcCCccc--ccCCcCCccccCCCCCCCC----CCCcCCCCCEEeC--C--EEEcCCCCCCCCCc----cccc
Confidence 479999999999886 2111 1354321 0112333899994 3 99999 999 6677
Q ss_pred eeeCCCccC---CCCCCC--CcEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcc---cccccccCCC
Q psy11799 360 CTQLSSSCL---SSPCSF--GCTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLG---DIDECKEEIN 431 (483)
Q Consensus 360 C~~~~~~C~---~~~C~~--~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~---~~~~C~~~~~ 431 (483)
|+.....|. ..+|.+ ++++.. .+|.|++||+|.. |. +++.|...
T Consensus 512 Ce~~~~~C~~~~~~~C~~~~~G~C~~---g~C~C~~G~~G~~-----------------------Cec~~~~~~C~~~-- 563 (687)
T 3k6s_B 512 CECDTINCERYNGQVCGGPGRGLCFC---GKCRCHPGFEGSA-----------------------CQCERTTEGCLNP-- 563 (687)
T ss_dssp SCEESSCSCEETTEETSHHHHEEEET---TEEEECTTCCSTT-----------------------SCSCCSSCTTBCT--
T ss_pred cccccccccCCCCcCcCCCCCCeEEC---CEEEcCCCCcCCC-----------------------CccCCCCCCCCCC--
Confidence 764333676 346876 555543 4899999998875 32 23556432
Q ss_pred CccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCCCCCCcccC
Q psy11799 432 GVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREG 481 (483)
Q Consensus 432 ~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~~~~~C~~g 481 (483)
...+|.++|+|+. ++|+|++|| .|..|+....|. ++|.++
T Consensus 564 ~g~~Cs~~G~C~~----g~C~C~~Gy----~G~~Ce~c~~C~--~~C~~~ 603 (687)
T 3k6s_B 564 RRVECSGRGRCRC----NVCECHSGY----QLPLCQECPGCP--SPCGKY 603 (687)
T ss_dssp TCSBTSSSCCBCS----SCBCCSTTC----CTTTTCCCTTSC--CCCTTT
T ss_pred CCCCCCCCCcCCC----CEEECCCCC----cCCCCCCCCCCC--cccCCC
Confidence 1127999999986 369999999 788888644564 456543
No 51
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.75 E-value=5.3e-09 Score=108.91 Aligned_cols=57 Identities=7% Similarity=-0.034 Sum_probs=31.5
Q ss_pred HHHhhhcccccCCCceEEEeCCCCeeeEeeecCCC---CcccCCceeeeccCcceeeecc
Q psy11799 16 LLIELLFLINMLAGIFVWSLASQWTGEILTNVSPY---PTSVNMASVSTRKGLTGVSVTR 72 (483)
Q Consensus 16 ~~~~~~~~~~~~~g~~~C~C~~g~~G~~C~~c~~~---~~~~~~~~C~c~~g~~g~~C~~ 72 (483)
...+.++...|+.-....+|.---.+..|..+... ......++|.|..||+|..|+.
T Consensus 235 ~~~~~~~~Yai~di~v~grC~CnGHa~~C~p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce~ 294 (525)
T 4aqs_A 235 MEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCEL 294 (525)
T ss_dssp HHHHTTCCCEEEEEEEEEECCCTTBCSCEECC------CCSCCCCEECCCTTEESSSSCE
T ss_pred ccccccccEEEEeeEECeEeccCCccccCCCcCCcccCCCCCcCccccCcCCCcCCCCcC
Confidence 33444566666655444444433334455533221 1223346899999999999985
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.68 E-value=1.8e-08 Score=98.04 Aligned_cols=80 Identities=29% Similarity=0.806 Sum_probs=67.6
Q ss_pred ccCCCCCCCC--cEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcc-cccccccCCCCccCCCCCCeE
Q psy11799 366 SCLSSPCSFG--CTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLG-DIDECKEEINGVAVCPKPGTC 442 (483)
Q Consensus 366 ~C~~~~C~~~--c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~-~~~~C~~~~~~~~~C~~~g~C 442 (483)
+|..+||.++ |.... ++|+|.|++||+|.. |+ ++++|.... ..+|.+ +|
T Consensus 7 ~C~~~pC~~~g~C~~~~-~~~~C~C~~g~~g~~-----------------------C~~~~~eC~~~~--~~~C~~--~C 58 (317)
T 3h5c_B 7 PCISQPCLHNGSCQDSI-WGYTCTCSPGYEGSN-----------------------CELAKNECHPER--TDGCQH--FC 58 (317)
T ss_dssp CTTSCCCTTTCCCCCCS-SSCCCCCSSSCCSSS-----------------------SCCCSSSCCTTC--TTSCSS--EE
T ss_pred cCCCCCCCCCCEeECCC-CCeEEECCCCCcCCc-----------------------cccCcccCCCCC--CCCCcC--cc
Confidence 8999999987 66555 789999999998765 76 899997521 128986 99
Q ss_pred eeCCCCeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 443 INTMGSFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 443 ~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
++..++|+|.|++||.++..+..|.+.++|.
T Consensus 59 ~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 59 LPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 89 (317)
T ss_dssp ECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred ccCCCeeEEeccccccccccccccccccccc
Confidence 9999999999999999998999999988875
No 53
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.64 E-value=7.9e-09 Score=103.50 Aligned_cols=84 Identities=38% Similarity=0.913 Sum_probs=22.4
Q ss_pred ccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCC
Q psy11799 190 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSG 269 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~ 269 (483)
++++|..+++.|.+.|.+..++|+|.|++||++..+++.|+++++|. .+..+.+.|+++.++|.|.|++||.+...+.
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~- 79 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRR- 79 (386)
T ss_dssp ---------------------------------------------------CCTTEEC-----CCEECCTTEEECTTSS-
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCC-
Confidence 56788877888888999889999999999999988899999999997 2234455699999999999999999887776
Q ss_pred ccccCc
Q psy11799 270 TCLDSD 275 (483)
Q Consensus 270 ~C~~~~ 275 (483)
.|...+
T Consensus 80 ~C~~~~ 85 (386)
T 3v65_B 80 SCKALG 85 (386)
T ss_dssp CEEECS
T ss_pred eECCcc
Confidence 676543
No 54
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.61 E-value=7.1e-08 Score=103.96 Aligned_cols=82 Identities=37% Similarity=0.965 Sum_probs=67.5
Q ss_pred ccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCC
Q psy11799 190 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSG 269 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~ 269 (483)
++++|...+..|.+.|++..++|+|.|++||++ .+++.|+++++|.. +..+.+.|+++.++|+|.|++||++...+.
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~- 369 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTK- 369 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCC-
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCC-
Confidence 456676666778889999999999999999997 67889999999973 234567999999999999999999877665
Q ss_pred ccccC
Q psy11799 270 TCLDS 274 (483)
Q Consensus 270 ~C~~~ 274 (483)
.|..+
T Consensus 370 ~C~~~ 374 (699)
T 1n7d_A 370 ACKAV 374 (699)
T ss_dssp CCBCC
T ss_pred ccccc
Confidence 66544
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.61 E-value=3.8e-08 Score=99.00 Aligned_cols=80 Identities=38% Similarity=0.992 Sum_probs=66.6
Q ss_pred chhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCcc
Q psy11799 192 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTC 271 (483)
Q Consensus 192 ~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C 271 (483)
++|...++.|.+.|++.+++|.|.|++||++ .+++.|+++++|.. +..+...|+++.++|.|.|.+||.+...+. .|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~-~C 77 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-AC 77 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTS-SC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc-cCCCCCccCCCccceeeecccccccccccc-ce
Confidence 3566567778899999999999999999998 57899999999973 345566999999999999999999887666 67
Q ss_pred ccC
Q psy11799 272 LDS 274 (483)
Q Consensus 272 ~~~ 274 (483)
..+
T Consensus 78 ~~~ 80 (400)
T 3p5b_L 78 KAV 80 (400)
T ss_dssp CCS
T ss_pred eec
Confidence 554
No 56
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.59 E-value=3.9e-08 Score=103.87 Aligned_cols=130 Identities=25% Similarity=0.461 Sum_probs=80.4
Q ss_pred cCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccc-cCc---------cccCCC--Cccc--ccccCCCCeeEeCC--
Q psy11799 236 EQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCL-DSD---------ECATGR--HICQ--QICNLLGGYKCGCP-- 299 (483)
Q Consensus 236 ~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~-~~~---------~C~~~~--~~c~--~~C~~~g~~~C~C~-- 299 (483)
...+|..+++|.. ..|.|.+||+|. .|. ..+ .|.... ..|. +.|.. ..|.|+
T Consensus 433 ~s~~Cs~~G~C~~----g~C~C~~Gy~G~-----~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~---G~C~C~~~ 500 (687)
T 3k6s_B 433 DRSLCHGKGFLEC----GICRCDTGYIGK-----NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---GQCLCHTS 500 (687)
T ss_dssp CSSTGGGSEEESS----SSEEECSSEEST-----TSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET---TEEEECCC
T ss_pred CCCCCCCCCEEeC----CEeEcCCCCcCC-----cccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC---CEEEcCCC
Confidence 3445666677762 469999999954 333 111 354321 1233 45541 389999
Q ss_pred ----CCceeCCCCCccccCCcCCCCCCCCCCCCCCCC--CCEEeeCCCCeeEECCCCCeeccCCCcee--eCCCccCCC-
Q psy11799 300 ----EGYVRHPFSNECIDDNECARNPCEPSSNTTGER--GGKCFNTAGSYRCGCPDGFQFEAALQLCT--QLSSSCLSS- 370 (483)
Q Consensus 300 ----~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~--~g~C~~~~g~~~C~C~~G~~~~~~g~~C~--~~~~~C~~~- 370 (483)
+||+|..|+ .+...|... ....|.+ +|+|+.. +|.|++|| .|..|+ ...+.|...
T Consensus 501 ~~~~~G~~G~~Ce---~~~~~C~~~-----~~~~C~~~~~G~C~~g----~C~C~~G~----~G~~Cec~~~~~~C~~~~ 564 (687)
T 3k6s_B 501 DVPGKLIYGQYCE---CDTINCERY-----NGQVCGGPGRGLCFCG----KCRCHPGF----EGSACQCERTTEGCLNPR 564 (687)
T ss_dssp CSTTCCEESTTSC---EESSCSCEE-----TTEETSHHHHEEEETT----EEEECTTC----CSTTSCSCCSSCTTBCTT
T ss_pred CCCCCCccccccc---cccccccCC-----CCcCcCCCCCCeEECC----EEEcCCCC----cCCCCccCCCCCCCCCCC
Confidence 999998876 234455431 1122344 6889852 89999999 566676 222367643
Q ss_pred --CCCCCcEECCCCCeeEeCCCCeeecC
Q psy11799 371 --PCSFGCTPLGISGFSCECPSGYQRIG 396 (483)
Q Consensus 371 --~C~~~c~~~~~~~~~C~C~~Gy~g~~ 396 (483)
+|.+++.+.. ++|.|++||+|..
T Consensus 565 g~~Cs~~G~C~~---g~C~C~~Gy~G~~ 589 (687)
T 3k6s_B 565 RVECSGRGRCRC---NVCECHSGYQLPL 589 (687)
T ss_dssp CSBTSSSCCBCS---SCBCCSTTCCTTT
T ss_pred CCCCCCCCcCCC---CEEECCCCCcCCC
Confidence 7877655543 5798988888865
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.59 E-value=7e-08 Score=104.88 Aligned_cols=109 Identities=33% Similarity=0.712 Sum_probs=79.8
Q ss_pred CeEEeCCC--CeEEeCCCCceeCCCCCcccccCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccCC
Q psy11799 203 FRCHNVPG--SFRCICPYGYALAPDGRHCIDINECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECATG 280 (483)
Q Consensus 203 ~~C~~~~g--s~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~ 280 (483)
+.|+.... ...+.|..|+. .....| ++++|......+.+.|+++.++|+|.|++||.+ ..+. .|.++++|. .
T Consensus 284 G~Ci~~~~~Cd~~~dC~dgsD--e~~~~C-~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~-~C~dideC~-~ 357 (791)
T 3m0c_C 284 GECITLDKVCNMARDCRDWSD--EPIKEC-GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQR-RCEDIDECQ-D 357 (791)
T ss_dssp SCCCCSSCCSCSSCCSSSSCS--CCCTTB-SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTT-EEECCCCCS-S
T ss_pred CcccccccccCCccccccccC--cccccc-ccccccccccCccccccCCCCCcccCCCCCCcc-CCCC-ccccCcccC-C
Confidence 55554432 12445666653 112335 356666555566779999999999999999998 3455 899999998 4
Q ss_pred CCcccccc-cCCCCeeEeCCCCceeCCCCCccccCCcC
Q psy11799 281 RHICQQIC-NLLGGYKCGCPEGYVRHPFSNECIDDNEC 317 (483)
Q Consensus 281 ~~~c~~~C-~~~g~~~C~C~~G~~g~~~~~~C~~~~~C 317 (483)
+..|.+.| +..++|.|.|++||.+......|..++++
T Consensus 358 ~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 358 PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp SSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred CCCCCCeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence 45788889 99999999999999998877888776654
No 58
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=2e-08 Score=100.52 Aligned_cols=84 Identities=35% Similarity=0.890 Sum_probs=24.3
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCCCe
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCAFR 204 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~~~ 204 (483)
++|+|... +.. | .++|++..++|+|.|++||++...+..|+++++|.. +..|...
T Consensus 2 ~~~~C~~~-~~~--c--~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~--------------------~~~C~~~ 56 (386)
T 3v65_B 2 GEENCNVN-NGG--C--AQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE--------------------EGYCSQG 56 (386)
T ss_dssp ---------------------------------------------------------------------------CCTTE
T ss_pred CcCcccCC-CCC--C--CCCCcCCCCCcEeECCCCceECCCCCccCccceeCC--------------------cCcccCc
Confidence 57889765 544 6 459999999999999999998777777766555542 3456667
Q ss_pred EEeCCCCeEEeCCCCceeCCCCCcccccC
Q psy11799 205 CHNVPGSFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 205 C~~~~gs~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
|++..++|+|.|.+||.+..+++.|..++
T Consensus 57 C~~~~g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 57 CTNSEGAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp EC-----CCEECCTTEEECTTSSCEEECS
T ss_pred CCCCCCCCeEEECCCceEcCCCCeECCcc
Confidence 99999999999999999998999996543
No 59
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=92.40 Aligned_cols=82 Identities=30% Similarity=0.690 Sum_probs=66.4
Q ss_pred ccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCccc-ccCcccC---CCCCCCCeeeeCCCCceEeCCCCceecC
Q psy11799 190 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI-DINECEQ---FPGLCAHTCTNTEGSYTCGCHPGFELSS 265 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~-~~~~C~~---~~~~~~~~C~~~~g~~~C~C~~G~~~~~ 265 (483)
++++|..+++..++.|++..++|+|.|++||+ |+.|+ ++++|.. .+|. +.|+++.++|.|.|++||.+..
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~--~~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCS--SEEECCSSSCEEECCTTEECCT
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCc--CccccCCCeeEEeccccccccc
Confidence 44556655655558899999999999999999 99997 9999986 4554 4999999999999999999877
Q ss_pred CCCCccccCcccc
Q psy11799 266 DGSGTCLDSDECA 278 (483)
Q Consensus 266 ~g~~~C~~~~~C~ 278 (483)
... .|.+.++|.
T Consensus 78 ~~~-~C~~~~~c~ 89 (317)
T 3h5c_B 78 DHK-QCVPHDQCA 89 (317)
T ss_dssp TSS-CCEECSSCC
T ss_pred ccc-ccccccccc
Confidence 666 788877774
No 60
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.46 E-value=1.8e-07 Score=93.98 Aligned_cols=79 Identities=42% Similarity=0.938 Sum_probs=67.2
Q ss_pred CcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccCCCCcccccc-cCCCCeeEeCCCCceeCCCCCcc
Q psy11799 233 NECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECATGRHICQQIC-NLLGGYKCGCPEGYVRHPFSNEC 311 (483)
Q Consensus 233 ~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~~~~~c~~~C-~~~g~~~C~C~~G~~g~~~~~~C 311 (483)
++|...++.+.+.|+++.++|.|.|++||++ ..+. .|+++++|.. +..|...| +..++|.|.|.+||.+......|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~-~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C 77 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQR-RCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 77 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSS-CEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCC-cccCchhhhc-cCCCCCccCCCccceeeeccccccccccccce
Confidence 4677778888999999999999999999998 3455 8999999984 45788889 88999999999999998777777
Q ss_pred ccC
Q psy11799 312 IDD 314 (483)
Q Consensus 312 ~~~ 314 (483)
..+
T Consensus 78 ~~~ 80 (400)
T 3p5b_L 78 KAV 80 (400)
T ss_dssp CCS
T ss_pred eec
Confidence 554
No 61
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.26 E-value=8e-07 Score=57.18 Aligned_cols=37 Identities=38% Similarity=0.988 Sum_probs=32.2
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 422 DIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 422 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
++++|... ||.++|+|++..++|+|.|++|| .|..|+
T Consensus 2 d~d~C~~~-----pC~ngg~C~~~~~~~~C~C~~G~----~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESN-----PCLNGGSCKDDINSYECWCPFGF----EGKNCE 38 (39)
T ss_dssp CCCTTTTC-----CCCTTCEEEEETTEEEEECCTTC----CSTTSC
T ss_pred ccccCCCC-----CCCCCCEeEcCCCceEeECCCCC----cCCccC
Confidence 56788654 99999999999999999999999 777775
No 62
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.18 E-value=3.8e-07 Score=64.58 Aligned_cols=45 Identities=22% Similarity=0.519 Sum_probs=39.1
Q ss_pred cccccccccCCCCccCCCCC--CeEeeCCCCeeeeCCCCcccCCC-CCCCCCCcCCC
Q psy11799 420 LGDIDECKEEINGVAVCPKP--GTCINTMGSFRCLCPRGFKLDRT-GTFCLDQDECT 473 (483)
Q Consensus 420 C~~~~~C~~~~~~~~~C~~~--g~C~~~~g~~~C~C~~G~~~~~~-g~~C~~~~~C~ 473 (483)
+.++++|... ||.++ |+|++..++|+|.|++|| . |..|++.++|.
T Consensus 8 ~~~~d~C~sn-----PC~nga~gtC~~~~g~y~C~C~~Gy----~~G~~C~~~~~C~ 55 (61)
T 2k2s_B 8 SETPAACSSN-----PCGPEAAGTCKETNSGYICRCNQGY----RISLDGTGNVTCI 55 (61)
T ss_dssp TTSCCHHHHC-----SSCSSSCCEEEECSSEEEEECCTTE----EEEECSSSCEEEE
T ss_pred cCCCCcCcCC-----CCcCCCccccccCCCceEeECCCCC----ccCCCCCCCCEec
Confidence 6788999765 99999 899999999999999999 7 78888777775
No 63
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.12 E-value=1.4e-06 Score=60.65 Aligned_cols=45 Identities=31% Similarity=0.663 Sum_probs=38.4
Q ss_pred chhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCccc
Q psy11799 192 NECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECE 236 (483)
Q Consensus 192 ~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~ 236 (483)
++|...+..|.+.|++++++|+|.|++||.+..++++|+++++|.
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 455554566778999999999999999999999999999998874
No 64
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.11 E-value=1.4e-06 Score=60.28 Aligned_cols=39 Identities=28% Similarity=0.701 Sum_probs=32.3
Q ss_pred ccccccccCCCCccCCCCCCeEe-----eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 421 GDIDECKEEINGVAVCPKPGTCI-----NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 421 ~~~~~C~~~~~~~~~C~~~g~C~-----~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
.++++|... ||+|+|+|+ +..++|+|.|++|| +|..|+.
T Consensus 6 ~~~~eC~s~-----pC~NgGtC~~~~~~d~~~~y~C~C~~g~----~G~~CE~ 49 (55)
T 3u7u_G 6 VKCAEKEKT-----FCVNGGECFMVKDLSNPSRYLCKCPNEF----TGDRCQN 49 (55)
T ss_dssp EECCSTTTT-----TSCTTCEEEEECCC--CCCEEEEECTTE----ESTTSCE
T ss_pred ccCCCCcCC-----CCCCCCCcCCCCccCCCCCEeEeCCCCC----cCCCcCc
Confidence 378899876 999999994 56789999999999 8999984
No 65
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.05 E-value=1.9e-06 Score=59.96 Aligned_cols=38 Identities=26% Similarity=0.615 Sum_probs=34.5
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTD 474 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~~ 474 (483)
.|. ..|+++.|+|+|.|++||+++.++++|+++++|.-
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCccccC
Confidence 675 49999999999999999999999999999999863
No 66
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.04 E-value=2.7e-06 Score=58.80 Aligned_cols=41 Identities=27% Similarity=0.682 Sum_probs=31.4
Q ss_pred cccc-cccccccCCCCccCCCCCCeE-----eeCCCceEeeCCCCCeeCCCCCccc
Q psy11799 121 SVFL-DMDECKEEINGVAVCPKPGTC-----INTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 121 ~~C~-~~~~C~~~~~~~~~C~~~g~C-----~~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
+.|+ ++|+|... | |.|+|+| ++..++|+|.|++||+ |..|+
T Consensus 2 ~~c~~~~~eC~s~-p----C~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 2 TSHLVKCAEKEKT-F----CVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp -CCEEECCSTTTT-T----SCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred CCCcccCCCCcCC-C----CCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 4454 78999865 4 9999999 4667899999999999 66665
No 67
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.03 E-value=2.9e-06 Score=61.87 Aligned_cols=48 Identities=29% Similarity=0.612 Sum_probs=42.1
Q ss_pred cccchhccCCCCCCCeEEeCCC-CeEEeCCCCceeCCCCCcccccCccc
Q psy11799 189 EDINECLELSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINECE 236 (483)
Q Consensus 189 ~~~~~C~~~~~~C~~~C~~~~g-s~~C~C~~G~~~~~~g~~C~~~~~C~ 236 (483)
.++++|...+..|...|++..+ +|+|.|++||.|..++++|+++++|.
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 4677787777788899999998 89999999999999999999988763
No 68
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.00 E-value=4.8e-06 Score=72.20 Aligned_cols=108 Identities=22% Similarity=0.379 Sum_probs=69.1
Q ss_pred CCEEeeCC--CCeeE-ECCCCCeeccCCCceee--------C------CCccCCCCCCCC------cEECCCCCeeEe-C
Q psy11799 333 GGKCFNTA--GSYRC-GCPDGFQFEAALQLCTQ--------L------SSSCLSSPCSFG------CTPLGISGFSCE-C 388 (483)
Q Consensus 333 ~g~C~~~~--g~~~C-~C~~G~~~~~~g~~C~~--------~------~~~C~~~~C~~~------c~~~~~~~~~C~-C 388 (483)
+++|+... +.++| .|+++|+| ..|+. . ...|.+-.|.++ ..++. ..++|. |
T Consensus 6 ~g~C~~~~~~g~~~C~~C~~g~~G----~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~-~tG~C~~C 80 (162)
T 1klo_A 6 GSSCAIVPKTKEVVCTHCPTGTAG----KRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR-LTGECLKC 80 (162)
T ss_dssp TCCEEECSSSCCEEECSCCTTEES----TTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCT-TTCCBCCB
T ss_pred cCcccccCCCCCEEeCCCCCCCcC----CCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccC-CCCcccCC
Confidence 88998765 57899 79999955 44442 0 012333345443 23333 567895 9
Q ss_pred CCCeeecCCcceecccCCCCCCCcccCCCCCcc--cccccccCCCCccCCCCCC------eEeeCCCCeeeeCCCCcccC
Q psy11799 389 PSGYQRIGQGHCLATISSGLYPGFRSYERPNLG--DIDECKEEINGVAVCPKPG------TCINTMGSFRCLCPRGFKLD 460 (483)
Q Consensus 389 ~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~--~~~~C~~~~~~~~~C~~~g------~C~~~~g~~~C~C~~G~~~~ 460 (483)
+++|+|....+ |++||+|.. +. ..+.|..- .|.+.+ +|.... .+|+|++||
T Consensus 81 ~~g~~G~~Ce~--------C~~Gy~g~~---~~~~~~~~C~~C-----~C~~~Gs~~~~~~Cd~~t--G~C~C~~g~--- 139 (162)
T 1klo_A 81 IYNTAGFYCDR--------CKEGFFGNP---LAPNPADKCKAC-----ACNPYGTVQQQSSCNPVT--GQCQCLPHV--- 139 (162)
T ss_dssp CTTEETTTTCE--------ECTTEEECT---TCSSGGGSEEEC-----CCCTTTBGGGCCCCCTTT--CCCCBCTTE---
T ss_pred CCCCcCCCcCc--------CchhhcCCc---cccCCCCCCeec-----cCCCCCccCCCCCCCCCC--CEeECCCCC---
Confidence 99999987443 788999976 32 22334321 465544 786544 479999999
Q ss_pred CCCCCCC
Q psy11799 461 RTGTFCL 467 (483)
Q Consensus 461 ~~g~~C~ 467 (483)
.|..|+
T Consensus 140 -~G~~Cd 145 (162)
T 1klo_A 140 -SGRDCG 145 (162)
T ss_dssp -ESTTCC
T ss_pred -cCCCCC
Confidence 677776
No 69
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.97 E-value=7.7e-06 Score=52.45 Aligned_cols=37 Identities=43% Similarity=1.027 Sum_probs=31.8
Q ss_pred cCCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCcee
Q psy11799 313 DDNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCT 361 (483)
Q Consensus 313 ~~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 361 (483)
++++|..+||.+ +|+|++..++|+|.|++|| .|+.|+
T Consensus 2 d~d~C~~~pC~n--------gg~C~~~~~~~~C~C~~G~----~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLN--------GGSCKDDINSYECWCPFGF----EGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCT--------TCEEEEETTEEEEECCTTC----CSTTSC
T ss_pred ccccCCCCCCCC--------CCEeEcCCCceEeECCCCC----cCCccC
Confidence 577898889998 8999999999999999999 555554
No 70
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.85 E-value=1.5e-05 Score=69.04 Aligned_cols=29 Identities=31% Similarity=0.734 Sum_probs=23.4
Q ss_pred CCCCCCeEeeCC--CceEe-eCCCCCeeCCCCCccc
Q psy11799 138 VCPKPGTCINTM--GSFRC-LCPRGFKLDRTGTFCL 170 (483)
Q Consensus 138 ~C~~~g~C~~~~--g~~~C-~C~~G~~g~~~g~~C~ 170 (483)
||+++++|+... +.++| .|+++|+ |..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~----G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTA----GKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEE----STTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCc----CCCCc
Confidence 388999999865 57899 7999999 55554
No 71
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.82 E-value=2e-05 Score=54.23 Aligned_cols=41 Identities=24% Similarity=0.698 Sum_probs=33.0
Q ss_pred cccccccCCCCccCCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 422 DIDECKEEINGVAVCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 422 ~~~~C~~~~~~~~~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
+|++|... ..+||.++|+|+ +..++|+|.|++|| +|..|+.
T Consensus 2 ~i~~C~~~--~~~pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSS--YDGYCLNGGVCMHIESLDSYTCNCVIGY----SGDRCQT 44 (53)
T ss_dssp EECCCCTT--SSCSSCSSCEEEEESSSSCEEEECCTTC----CSSSSCC
T ss_pred CcccCCCC--CCCcCCCCcEEEeeCCCCCEEEECCCCC----cCCcCCc
Confidence 46677642 123899999999 78899999999999 8889974
No 72
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.79 E-value=1.2e-05 Score=58.58 Aligned_cols=48 Identities=27% Similarity=0.502 Sum_probs=40.4
Q ss_pred ccccccccCCCCccCCCCCCeEeeCCC-CeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 421 GDIDECKEEINGVAVCPKPGTCINTMG-SFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 421 ~~~~~C~~~~~~~~~C~~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
.|+++|..... .|. ..|+++.+ +|+|.|++||.+..++++|.+++||.
T Consensus 3 ~d~~eC~~~ng---gC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENG---GCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGG---GCS--SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCC---CcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 47788865422 575 58999998 89999999999999999999999986
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.78 E-value=1e-05 Score=57.23 Aligned_cols=40 Identities=25% Similarity=0.610 Sum_probs=32.4
Q ss_pred cccccccccccccCCCCccCCCCC--CeEeeCCCceEeeCCCCCe-eC
Q psy11799 119 FYSVFLDMDECKEEINGVAVCPKP--GTCINTMGSFRCLCPRGFK-LD 163 (483)
Q Consensus 119 ~~~~C~~~~~C~~~~~~~~~C~~~--g~C~~~~g~~~C~C~~G~~-g~ 163 (483)
|-..+.++|+|..+ | |.++ |+|++..++|+|.|++||+ |.
T Consensus 4 ~~~~~~~~d~C~sn-P----C~nga~gtC~~~~g~y~C~C~~Gy~~G~ 46 (61)
T 2k2s_B 4 FVQLSETPAACSSN-P----CGPEAAGTCKETNSGYICRCNQGYRISL 46 (61)
T ss_dssp ---CTTSCCHHHHC-S----SCSSSCCEEEECSSEEEEECCTTEEEEE
T ss_pred hhhhcCCCCcCcCC-C----CcCCCccccccCCCceEeECCCCCccCC
Confidence 34557788999864 4 9888 8999999999999999998 75
No 74
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.77 E-value=8.8e-06 Score=55.55 Aligned_cols=38 Identities=26% Similarity=0.715 Sum_probs=34.0
Q ss_pred CCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCcc
Q psy11799 198 SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINEC 235 (483)
Q Consensus 198 ~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C 235 (483)
+..|.+.|++..++|+|.|++||.+..++++|++++++
T Consensus 5 ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 5 NGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp TTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 45566789999999999999999999999999998876
No 75
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.75 E-value=1.6e-05 Score=54.66 Aligned_cols=40 Identities=30% Similarity=0.617 Sum_probs=34.8
Q ss_pred CCCCCCCeEEeCCC-CeEEeCCCCceeCCCCCcccccCccc
Q psy11799 197 LSNQCAFRCHNVPG-SFRCICPYGYALAPDGRHCIDINECE 236 (483)
Q Consensus 197 ~~~~C~~~C~~~~g-s~~C~C~~G~~~~~~g~~C~~~~~C~ 236 (483)
.+..|...|++..+ +|+|.|++||.|..++++|+++++|.
T Consensus 5 ~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 5 ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 34557789999998 79999999999999999999998873
No 76
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.74 E-value=2.2e-05 Score=54.05 Aligned_cols=46 Identities=28% Similarity=0.667 Sum_probs=35.4
Q ss_pred ccccccccCCC-----CccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 421 GDIDECKEEIN-----GVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 421 ~~~~~C~~~~~-----~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
.||++|..... ...+|. ++|+++.|+|+|.|++||+++.++.+|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 36788865310 012786 59999999999999999999888988864
No 77
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.73 E-value=1.8e-05 Score=56.77 Aligned_cols=42 Identities=26% Similarity=0.604 Sum_probs=34.7
Q ss_pred cccccCCCCccCCCCCCeEee-----CCCCeeeeCCCCcccCCCCCCCC-CCcCCCC
Q psy11799 424 DECKEEINGVAVCPKPGTCIN-----TMGSFRCLCPRGFKLDRTGTFCL-DQDECTD 474 (483)
Q Consensus 424 ~~C~~~~~~~~~C~~~g~C~~-----~~g~~~C~C~~G~~~~~~g~~C~-~~~~C~~ 474 (483)
++|... ||.|+|+|++ ..++|+|.|++|| +|..|+ +++++..
T Consensus 7 ~~C~~~-----pC~ngG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKT-----FCVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMKVQ 54 (63)
T ss_dssp CHHHHT-----TSCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSSCT
T ss_pred CCCCCC-----cCCCCcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCcccc
Confidence 566554 9999999996 6689999999999 799997 6777764
No 78
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.70 E-value=2.6e-05 Score=70.71 Aligned_cols=97 Identities=27% Similarity=0.433 Sum_probs=62.0
Q ss_pred CCEEeeCCCCeeEECCCCCeeccCCCceeeCC---------CccC----CCCCCCCcEECCCCCeeEeCCCCeeecCCcc
Q psy11799 333 GGKCFNTAGSYRCGCPDGFQFEAALQLCTQLS---------SSCL----SSPCSFGCTPLGISGFSCECPSGYQRIGQGH 399 (483)
Q Consensus 333 ~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~---------~~C~----~~~C~~~c~~~~~~~~~C~C~~Gy~g~~~g~ 399 (483)
+|+|+. + .|.|++||. |+.|+-.. ..|. ..+|.++.++.. ++|.|.+||.+.
T Consensus 101 ~G~C~~--g--~C~C~~G~~----G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~---g~C~C~~gw~~~---- 165 (217)
T 2p28_B 101 KGFLEC--G--ICRCDTGYI----GKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---GQCLCHTSDVPG---- 165 (217)
T ss_dssp SEEEET--T--EEEECTTEE----STTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET---TEEEECCCCSTT----
T ss_pred CceEEC--C--EEECCCCcc----CCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC---CceECCCCCCCc----
Confidence 899985 2 899999995 45554221 1354 356776655543 479999995321
Q ss_pred eecccCCCCCCCcccCCCCCcc-cccccccCCCCccCCCCC--CeEeeCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 400 CLATISSGLYPGFRSYERPNLG-DIDECKEEINGVAVCPKP--GTCINTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 400 C~~~~~~~C~~g~~g~~~~~C~-~~~~C~~~~~~~~~C~~~--g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
..|+|.. |+ +++.|... ...+|.++ |+|+. .+|.|.+|| .|..|+
T Consensus 166 ----------~~~~G~~---Ce~~~~~C~~~--~g~~C~~~~~G~C~~----g~C~C~~G~----~G~~C~ 213 (217)
T 2p28_B 166 ----------KLIYGQY---CECDTINCERY--NGQVCGGPGRGLCFC----GKCRCHPGF----EGSACQ 213 (217)
T ss_dssp ----------CCEESTT---SCEESSCSCEE--TTEETTCTTTEEEET----TEEEECTTE----ESTTSC
T ss_pred ----------ccEECCC---cccCCccCCCC--CCCCCCCCCCcEEeC----CeeECCCCC----ccCCcC
Confidence 1233333 54 34566542 11269888 99985 279999999 677776
No 79
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.65 E-value=3.7e-05 Score=56.39 Aligned_cols=42 Identities=29% Similarity=0.494 Sum_probs=31.1
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCCeeee-CCCCcccCCCCCCC
Q psy11799 422 DIDECKEEINGVAVCPKPGTCINTMGSFRCL-CPRGFKLDRTGTFC 466 (483)
Q Consensus 422 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~-C~~G~~~~~~g~~C 466 (483)
|||||....+ +|.++++|+|+.|+|+|. +..||.++.++..+
T Consensus 2 DidEC~~~~~---~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 2 DVNECLTIPE---ACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CSCCTTCCCC---SCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred ccccccCCCC---CCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence 6889976444 899889999999999998 34556555544433
No 80
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.63 E-value=5.6e-05 Score=52.00 Aligned_cols=41 Identities=39% Similarity=0.882 Sum_probs=33.2
Q ss_pred ccchhccC--------CCCCCCeEEeCCCCeEEeCCCCceeCCCCCccc
Q psy11799 190 DINECLEL--------SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI 230 (483)
Q Consensus 190 ~~~~C~~~--------~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~ 230 (483)
+|++|... ...|.+.|++..++|+|.|++||++..+++.|+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence 55666543 256778999999999999999999888888875
No 81
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.61 E-value=3.3e-05 Score=51.32 Aligned_cols=40 Identities=30% Similarity=0.762 Sum_probs=30.0
Q ss_pred cccccccCCCCccCCCCCCeEeeCC--CCeeeeCCCCcccCCCCCCCCC
Q psy11799 422 DIDECKEEINGVAVCPKPGTCINTM--GSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 422 ~~~~C~~~~~~~~~C~~~g~C~~~~--g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
++++|.... .+||.| |+|++.. ++|+|.|++|| +|..|+.
T Consensus 2 ~i~~C~~~~--~~pC~n-G~C~~~~~~~~~~C~C~~Gy----tG~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDM--NGYCLH-GQCIYLVDMSQNYCRCEVGY----TGVRCEH 43 (46)
T ss_dssp CEECCCTTC--CSSCSS-EEEEEETTTTEEEEEECTTC----SSTTSCC
T ss_pred ccccCCCCC--CCCCCC-CEeeccCCCCCEEEECCCCC----ccCCCCc
Confidence 356675511 129999 8999744 68999999999 8888874
No 82
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.58 E-value=2.2e-05 Score=53.52 Aligned_cols=37 Identities=22% Similarity=0.608 Sum_probs=33.1
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
.|. ..|+++.|+|+|.|++||++..++++|++++|+.
T Consensus 7 ~C~--~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 7 GCD--QFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp SSS--SCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred CcC--CEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 564 4799999999999999999999999999999874
No 83
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.58 E-value=8.5e-06 Score=55.93 Aligned_cols=30 Identities=27% Similarity=0.734 Sum_probs=25.7
Q ss_pred CCCCCCeEee----CCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCIN----TMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~~----~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
||.|+|+|++ ..++|+|+|++|| .|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf----~G~~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGF----MGQRCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTE----ESTTSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCC----cCCCCcc
Confidence 8999999996 3568999999999 7888874
No 84
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.49 E-value=0.0001 Score=50.62 Aligned_cols=39 Identities=28% Similarity=0.710 Sum_probs=32.2
Q ss_pred cCCcCCCC---CCCCCCCCCCCCCCEEe--eCCCCeeEECCCCCeeccCCCceeeC
Q psy11799 313 DDNECARN---PCEPSSNTTGERGGKCF--NTAGSYRCGCPDGFQFEAALQLCTQL 363 (483)
Q Consensus 313 ~~~~C~~~---~C~~~~~~~c~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~~ 363 (483)
++++|..+ ||.+ +|+|+ +..++|.|.|++|| .|+.|+..
T Consensus 2 ~i~~C~~~~~~pC~n--------gg~C~~~~~~~~~~C~C~~G~----~G~~Ce~~ 45 (53)
T 1egf_A 2 SYPGCPSSYDGYCLN--------GGVCMHIESLDSYTCNCVIGY----SGDRCQTR 45 (53)
T ss_dssp EECCCCTTSSCSSCS--------SCEEEEESSSSCEEEECCTTC----CSSSSCCC
T ss_pred CcccCCCCCCCcCCC--------CcEEEeeCCCCCEEEECCCCC----cCCcCCcc
Confidence 46778775 8988 99999 78899999999999 66777654
No 85
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.48 E-value=5.4e-05 Score=52.04 Aligned_cols=37 Identities=27% Similarity=0.577 Sum_probs=33.1
Q ss_pred CCCCCCeEeeCCC-CeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 435 VCPKPGTCINTMG-SFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 435 ~C~~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
.|. ..|+++.+ +|+|.|++||++..++++|++++||.
T Consensus 8 gC~--~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 8 GCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GCS--SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CcC--CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 464 47999998 79999999999999999999999985
No 86
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.47 E-value=6.8e-05 Score=49.61 Aligned_cols=29 Identities=28% Similarity=0.815 Sum_probs=26.5
Q ss_pred CCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
||.++|+|+ +..++|+|.|++|| +|..|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~----~G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGY----SGDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTE----ETTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCC----cCCcCC
Confidence 899999998 67789999999999 788887
No 87
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.38 E-value=0.00017 Score=50.67 Aligned_cols=37 Identities=27% Similarity=0.607 Sum_probs=31.9
Q ss_pred CCCCCCCeEEeCC-CCeEEeCCCCceeCCCCCcccccC
Q psy11799 197 LSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 197 ~~~~C~~~C~~~~-gs~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
.+..|...|++.+ ++|.|.|++||.|..+++.|++++
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 3456778999998 699999999999999999998765
No 88
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.37 E-value=7.8e-05 Score=67.50 Aligned_cols=86 Identities=21% Similarity=0.429 Sum_probs=58.0
Q ss_pred eeEeCCCCceeCCCCCccccC--------CcCC----CCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeec--cCCCc
Q psy11799 294 YKCGCPEGYVRHPFSNECIDD--------NECA----RNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFE--AALQL 359 (483)
Q Consensus 294 ~~C~C~~G~~g~~~~~~C~~~--------~~C~----~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~--~~g~~ 359 (483)
..|.|.+||+|..|+ |... ..|. ..+|.+ +|+|+.. .|.|.+||.+. ..|..
T Consensus 107 g~C~C~~G~~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg--------~G~C~~g----~C~C~~gw~~~~~~~G~~ 172 (217)
T 2p28_B 107 GICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSG--------LGDCVCG----QCLCHTSDVPGKLIYGQY 172 (217)
T ss_dssp TEEEECTTEESTTSC--EECCCCC-GGGGGGGBSSTTSCBGGG--------TEEEETT----EEEECCCCSTTCCEESTT
T ss_pred CEEECCCCccCCccc--ccCcccccccCCCcCCCCCCCCCCCC--------CCEEeCC----ceECCCCCCCcccEECCC
Confidence 479999999999886 2211 1243 234554 8999852 89999995221 15677
Q ss_pred eeeCCCccCCC---CCCCC--cEECCCCCeeEeCCCCeeecC
Q psy11799 360 CTQLSSSCLSS---PCSFG--CTPLGISGFSCECPSGYQRIG 396 (483)
Q Consensus 360 C~~~~~~C~~~---~C~~~--c~~~~~~~~~C~C~~Gy~g~~ 396 (483)
|+.....|... +|.++ .++.. .+|.|.+||+|..
T Consensus 173 Ce~~~~~C~~~~g~~C~~~~~G~C~~---g~C~C~~G~~G~~ 211 (217)
T 2p28_B 173 CECDTINCERYNGQVCGGPGRGLCFC---GKCRCHPGFEGSA 211 (217)
T ss_dssp SCEESSCSCEETTEETTCTTTEEEET---TEEEECTTEESTT
T ss_pred cccCCccCCCCCCCCCCCCCCcEEeC---CeeECCCCCccCC
Confidence 87443367743 78765 56553 4899999999875
No 89
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.34 E-value=3.3e-05 Score=78.67 Aligned_cols=80 Identities=23% Similarity=0.520 Sum_probs=31.5
Q ss_pred eEECCCCCeeccCCCceeeCCCccCCCCCCCCcEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccc
Q psy11799 344 RCGCPDGFQFEAALQLCTQLSSSCLSSPCSFGCTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDI 423 (483)
Q Consensus 344 ~C~C~~G~~~~~~g~~C~~~~~~C~~~~C~~~c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~ 423 (483)
...|..+| .+..|+.. .|.. +|.++ ++.. .++|.|++||+|.. |. +
T Consensus 378 p~~C~~~~----~g~~c~~~--~C~~-~C~nG-~C~~--~~~C~C~~G~~G~~-----------------------C~-~ 423 (463)
T 2wg3_C 378 PEECRATV----QPAQTLTS--ECSR-LCRNG-YCTP--TGKCCCSPGWEGDF-----------------------CR-T 423 (463)
T ss_dssp CGGGCCCC----CCCCCCCC--HHHH-HCCSE-EECT--TSCEEECTTEESTT-----------------------SC-E
T ss_pred cccCCCCC----cCCCCccc--cccC-CCCCC-ccCC--CCeECCCCCcCCCc-----------------------CC-c
Confidence 45677888 44455532 5654 58774 5553 35899999999865 42 4
Q ss_pred cccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCc
Q psy11799 424 DECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQD 470 (483)
Q Consensus 424 ~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~ 470 (483)
+.|.. +|.++|+|++. ++|.|++|| .|..|+..+
T Consensus 424 ~~C~~------~C~~~g~C~~~---~~C~C~~G~----~G~~C~~~~ 457 (463)
T 2wg3_C 424 AKCEP------ACRHGGVCVRP---NKCLCKKGY----LGPQCEQVD 457 (463)
T ss_dssp ECC--------------------------------------------
T ss_pred CcCCC------CCCCCCEECCC---CEEECCCCc----ccCCCCCCc
Confidence 56753 79999999865 589999999 788887543
No 90
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.28 E-value=0.0002 Score=52.48 Aligned_cols=40 Identities=30% Similarity=0.576 Sum_probs=31.0
Q ss_pred cccccccCCCCccCCCCCCeEeeCCCceEee-CCCCCeeCCCCC
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTMGSFRCL-CPRGFKLDRTGT 167 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~-C~~G~~g~~~g~ 167 (483)
|||+|... ++. |.++++|+|+.|+|+|. +..||.++..+.
T Consensus 2 DidEC~~~-~~~--C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~ 42 (71)
T 2kl7_A 2 DVNECLTI-PEA--CKGEMKCINHYGGYLCLPRSAAVINDLHGE 42 (71)
T ss_dssp CSCCTTCC-CCS--CTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred ccccccCC-CCC--CCCCCEeECCCCCeEecccCCcccccccCC
Confidence 68999854 444 98889999999999998 456777665554
No 91
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.25 E-value=0.00022 Score=47.09 Aligned_cols=35 Identities=26% Similarity=0.620 Sum_probs=28.0
Q ss_pred cCCCC---CCCCCCCCCCCCCCEEe--eCCCCeeEECCCCCeeccCCCceee
Q psy11799 316 ECARN---PCEPSSNTTGERGGKCF--NTAGSYRCGCPDGFQFEAALQLCTQ 362 (483)
Q Consensus 316 ~C~~~---~C~~~~~~~c~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 362 (483)
+|..+ ||.+ +|+|+ +..++|+|.|++|| .|+.|+.
T Consensus 2 ~C~~~~~~pC~n--------gg~C~~~~~~~~~~C~C~~G~----~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLN--------GGVXMHIESLDSYTCNCVIGY----SGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSS--------SCEEEECTTTSSEEEECCTTE----ETTTTCE
T ss_pred CcccCCCCCCCC--------CCEEEeecCCCCEEEEcCCCC----cCCcCCc
Confidence 45555 8888 99998 67789999999999 5666754
No 92
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.23 E-value=7.1e-05 Score=69.78 Aligned_cols=46 Identities=17% Similarity=0.489 Sum_probs=36.3
Q ss_pred ccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcC
Q psy11799 421 GDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDE 471 (483)
Q Consensus 421 ~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~ 471 (483)
.|+|||..... +|..++.|+|+.|+|.|.|++||.|+ |..|.++++
T Consensus 3 ~DiDEC~~~~~---~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn--G~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRH---QCSVHAECRDYATGFCCRCVANYTGN--GRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGG---GSCTTEEEEECSSCEEEEECTTEEEC--SSSEEETTC
T ss_pred ccchhccCCCC---CCCCCCEeEcCCCCeEEEcCCCCCCC--CCcCCCCCC
Confidence 47899975433 89999999999999999999999875 888988765
No 93
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.23 E-value=0.0002 Score=47.44 Aligned_cols=39 Identities=26% Similarity=0.693 Sum_probs=28.6
Q ss_pred cccccccCCCCccCCCCCCeEeeCC--CceEeeCCCCCeeCCCCCccc
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTM--GSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~--g~~~C~C~~G~~g~~~g~~C~ 170 (483)
++++|... ..+||.+ |+|++.. ++|.|+|++||+ |..|+
T Consensus 2 ~i~~C~~~--~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 2 SITKCSSD--MNGYCLH-GQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CEECCCTT--CCSSCSS-EEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred ccccCCCC--CCCCCCC-CEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 46778752 2234988 8999754 689999999999 55665
No 94
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.19 E-value=0.00012 Score=50.20 Aligned_cols=30 Identities=27% Similarity=0.836 Sum_probs=26.9
Q ss_pred CCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
||.|+|+|+ +..++|+|+|++|| +|..|+.
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~Gy----tG~~Ce~ 44 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGY----IGERCQY 44 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTE----ESTTSCE
T ss_pred CCCCCeEEeeecCCCCEEEecCCCC----cCCCCCc
Confidence 899999998 67789999999999 8888873
No 95
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.10 E-value=0.00014 Score=67.69 Aligned_cols=46 Identities=20% Similarity=0.556 Sum_probs=35.6
Q ss_pred ccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCC
Q psy11799 124 LDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDE 174 (483)
Q Consensus 124 ~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~ 174 (483)
+|+|+|... .+. |+.++.|+|+.|+|.|.|++||.|+ |..|.++|.
T Consensus 3 ~DiDEC~~~-~~~--C~~~a~C~Nt~Gsy~C~C~~Gy~Gn--G~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANN-RHQ--CSVHAECRDYATGFCCRCVANYTGN--GRQCVAEGS 48 (285)
T ss_dssp ----CHHHH-GGG--SCTTEEEEECSSCEEEEECTTEEEC--SSSEEETTC
T ss_pred ccchhccCC-CCC--CCCCCEeEcCCCCeEEEcCCCCCCC--CCcCCCCCC
Confidence 378999854 444 9999999999999999999999987 778876654
No 96
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.04 E-value=0.00021 Score=51.04 Aligned_cols=43 Identities=30% Similarity=0.627 Sum_probs=32.8
Q ss_pred CCcCCCCCCCCCCCCCCCCCCEEee-----CCCCeeEECCCCCeeccCCCceeeCCCccC
Q psy11799 314 DNECARNPCEPSSNTTGERGGKCFN-----TAGSYRCGCPDGFQFEAALQLCTQLSSSCL 368 (483)
Q Consensus 314 ~~~C~~~~C~~~~~~~c~~~g~C~~-----~~g~~~C~C~~G~~~~~~g~~C~~~~~~C~ 368 (483)
.++|..+||.+ +|+|++ ..++|.|.|++|| .|+.|+...+++.
T Consensus 6 c~~C~~~pC~n--------gG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 6 CAEKEKTFCVN--------GGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMKV 53 (63)
T ss_dssp CCHHHHTTSCT--------TCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSSC
T ss_pred cCCCCCCcCCC--------CcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCccc
Confidence 35676789988 999997 6689999999999 6677864443543
No 97
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.01 E-value=0.00067 Score=47.58 Aligned_cols=35 Identities=23% Similarity=0.567 Sum_probs=30.3
Q ss_pred CCCCCCeEeeCC-CCeeeeCCCCcccCCCCCCCCCCcC
Q psy11799 435 VCPKPGTCINTM-GSFRCLCPRGFKLDRTGTFCLDQDE 471 (483)
Q Consensus 435 ~C~~~g~C~~~~-g~~~C~C~~G~~~~~~g~~C~~~~~ 471 (483)
.|. ..|+++. |+|+|.|++||.+..++++|+++++
T Consensus 8 gC~--~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 8 RCE--QFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp GCS--SEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CcC--CEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 464 4899998 6999999999999999999998764
No 98
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.70 E-value=0.00092 Score=45.74 Aligned_cols=30 Identities=27% Similarity=0.856 Sum_probs=25.0
Q ss_pred cCCCCCCeEe--eCCCceEeeCCCCCeeCCCCCccc
Q psy11799 137 AVCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 137 ~~C~~~g~C~--~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
+||.++|+|+ +..++|+|+|++||+ |..|+
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 3499999998 667889999999999 55664
No 99
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.68 E-value=0.00051 Score=59.23 Aligned_cols=35 Identities=34% Similarity=0.838 Sum_probs=31.3
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
+|.++++|++..++|+|+|++|| .|..|+.+++|.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~----~G~~Ce~~~~c~ 160 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGF----YGPECEYVRDDD 160 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTE----ESTTSCEECC--
T ss_pred CCCCCCEEecCCCCceEeCCCCC----cCcccccCcccC
Confidence 89999999999999999999999 788999999997
No 100
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.58 E-value=0.00054 Score=47.85 Aligned_cols=30 Identities=27% Similarity=0.747 Sum_probs=25.7
Q ss_pred CCCCCCeEe--e--CCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCI--N--TMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~--~--~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
+|.|+|+|+ + ..++|.|.|++|| .|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf----~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGF----MGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTE----ESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCC----ccCCCcc
Confidence 799999998 3 4557999999999 7888884
No 101
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.58 E-value=0.00099 Score=45.42 Aligned_cols=29 Identities=28% Similarity=0.782 Sum_probs=23.8
Q ss_pred CCCCCCeEee----CCCceEeeCCCCCeeCCCCCccc
Q psy11799 138 VCPKPGTCIN----TMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 138 ~C~~~g~C~~----~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
||.|+|+|++ ..++|+|+|++||+ |..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 3999999997 35689999999999 55565
No 102
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.55 E-value=0.00093 Score=66.08 Aligned_cols=37 Identities=41% Similarity=1.062 Sum_probs=0.0
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCCCCCCcc
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCR 479 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~~~~~C~ 479 (483)
+|.|+|+|.+.. +|+|++|| .|..|+. ..|...+.|.
T Consensus 372 ~C~ngg~C~~~~---~C~C~~G~----~G~~Ce~-c~C~~~g~C~ 408 (426)
T 3zyj_B 372 HCQNGGTCHNNV---RCLCPAAY----TGILCEK-LRCEEAGSCG 408 (426)
T ss_dssp ---------------------------------------------
T ss_pred cCCCCCCcCCCC---CCcCCCCC----cCCCCcC-CCCCCCCccc
Confidence 899999998765 89999999 6777874 4566555553
No 103
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.38 E-value=0.00062 Score=69.27 Aligned_cols=77 Identities=30% Similarity=0.760 Sum_probs=30.4
Q ss_pred eecccCcccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccc
Q psy11799 113 SLKKKKFYSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDIN 192 (483)
Q Consensus 113 ~~~~~~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~ 192 (483)
.|...+++..|. +++|... |.+ |+|++.. +|.|.+||+ |..|+ .+.|.. +|.+
T Consensus 380 ~C~~~~~g~~c~-~~~C~~~------C~n-G~C~~~~---~C~C~~G~~----G~~C~-~~~C~~--~C~~--------- 432 (463)
T 2wg3_C 380 ECRATVQPAQTL-TSECSRL------CRN-GYCTPTG---KCCCSPGWE----GDFCR-TAKCEP--ACRH--------- 432 (463)
T ss_dssp GGCCCCCCCCCC-CCHHHHH------CCS-EEECTTS---CEEECTTEE----STTSC-EECC-----------------
T ss_pred cCCCCCcCCCCc-cccccCC------CCC-CccCCCC---eECCCCCcC----CCcCC-cCcCCC--CCCC---------
Confidence 344455556665 4678753 975 8998643 799999999 55563 233332 2222
Q ss_pred hhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCccccc
Q psy11799 193 ECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 232 (483)
Q Consensus 193 ~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~ 232 (483)
+++|++. ++|.|.+||+ |..|+..
T Consensus 433 ---------~g~C~~~---~~C~C~~G~~----G~~C~~~ 456 (463)
T 2wg3_C 433 ---------GGVCVRP---NKCLCKKGYL----GPQCEQV 456 (463)
T ss_dssp ----------------------------------------
T ss_pred ---------CCEECCC---CEEECCCCcc----cCCCCCC
Confidence 2678754 5899999999 9988643
No 104
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.14 E-value=0.0087 Score=46.24 Aligned_cols=63 Identities=25% Similarity=0.474 Sum_probs=48.1
Q ss_pred CCCCCeEee-CCCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCC--CeEEeCC-CCeEE
Q psy11799 139 CPKPGTCIN-TMGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA--FRCHNVP-GSFRC 214 (483)
Q Consensus 139 C~~~g~C~~-~~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~--~~C~~~~-gs~~C 214 (483)
|..++.|.. .+|..+|+|..||+++ +..|...++ .|..++.+|. +.|+... ..-.|
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~d--g~~Cv~~Np------------------~C~~nNGGCd~nAeC~~~~~~ki~C 77 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEV--GGKCVPASI------------------TCEENNGGCAPEAECTMDDKKEVEC 77 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEEC--SSSEEECCC------------------CTTSGGGGSCTTSEEEECTTSCEEE
T ss_pred CCCCCCeEECCCCCEeEEEECCeecc--CCEEEECCc------------------chhhcCCCcCCCcEeEECCCCEEEe
Confidence 778999998 6888999999999986 666764443 0333355555 8898875 67899
Q ss_pred eCCCCce
Q psy11799 215 ICPYGYA 221 (483)
Q Consensus 215 ~C~~G~~ 221 (483)
.|..+|+
T Consensus 78 ~C~~~~~ 84 (105)
T 1n1i_A 78 KCTKEGS 84 (105)
T ss_dssp ECCSTTC
T ss_pred ECCCCCC
Confidence 9999974
No 105
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.03 E-value=0.0053 Score=47.11 Aligned_cols=64 Identities=22% Similarity=0.579 Sum_probs=46.6
Q ss_pred CCCCCeEeeC-CCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCC--CeEEeCC-----C
Q psy11799 139 CPKPGTCINT-MGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA--FRCHNVP-----G 210 (483)
Q Consensus 139 C~~~g~C~~~-~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~--~~C~~~~-----g 210 (483)
|+.++.|.+. ++.++|+|.+||+++ +..|.... ...|+.++..|. +.|+... +
T Consensus 12 C~~NA~C~r~~~g~e~C~C~~gy~gd--g~~Cv~~~-----------------~~sC~~nNGGCd~nA~C~~~~~~~~~~ 72 (99)
T 1ob1_C 12 CPQNSGCFRHLDEREECKCLLNYKQE--GDKCVENP-----------------NPTCNENNGGCDADAKCTEEDSGSNGK 72 (99)
T ss_dssp CCTTEEEECCTTSCCEEEECTTEEEE--TTEEEECS-----------------CCCSTTGGGGCCTTEEEECCSCSSSSC
T ss_pred CCCCCCeEEcCCCCEEEEecCCeecC--CCeEeeCC-----------------CCChhhcCCCcCCCceeEecCCcccCC
Confidence 7889999984 788999999999986 67776442 023333344454 7887764 5
Q ss_pred CeEEeCCCCce
Q psy11799 211 SFRCICPYGYA 221 (483)
Q Consensus 211 s~~C~C~~G~~ 221 (483)
...|.|.+||+
T Consensus 73 ki~C~C~~g~~ 83 (99)
T 1ob1_C 73 KITCECTKPDS 83 (99)
T ss_dssp CCEEEECSTTC
T ss_pred ceEeEeCCCCc
Confidence 68999999985
No 106
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.02 E-value=0.0022 Score=44.73 Aligned_cols=29 Identities=28% Similarity=0.795 Sum_probs=23.5
Q ss_pred CCCCCCeEe--e--CCCceEeeCCCCCeeCCCCCccc
Q psy11799 138 VCPKPGTCI--N--TMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 138 ~C~~~g~C~--~--~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
||.|+|+|+ + ..++|.|.|++||+ |..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 499999998 3 45579999999999 55665
No 107
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.74 E-value=0.0066 Score=52.63 Aligned_cols=43 Identities=40% Similarity=0.896 Sum_probs=33.5
Q ss_pred ccchhccCCCC---CCCeEEeCCCCeEEeCCCCceeCCCCCccccc
Q psy11799 190 DINECLELSNQ---CAFRCHNVPGSFRCICPYGYALAPDGRHCIDI 232 (483)
Q Consensus 190 ~~~~C~~~~~~---C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~ 232 (483)
++++|...+.. |...|++..++|.|.|++||++..+++.|+++
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 44455544433 77789999999999999999998889888654
No 108
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.69 E-value=0.011 Score=48.15 Aligned_cols=29 Identities=34% Similarity=0.921 Sum_probs=24.1
Q ss_pred CCCCCCeEeeCC--Cce-EeeCCCCCeeCCCCCccc
Q psy11799 138 VCPKPGTCINTM--GSF-RCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 138 ~C~~~g~C~~~~--g~~-~C~C~~G~~g~~~g~~C~ 170 (483)
||.++|+|++.. .+| +|.|++||+ |..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEE----STTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCC----Ccccc
Confidence 499999999874 556 999999999 66675
No 109
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.66 E-value=0.0058 Score=53.03 Aligned_cols=48 Identities=35% Similarity=0.783 Sum_probs=36.9
Q ss_pred cccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCC
Q psy11799 420 LGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQ 469 (483)
Q Consensus 420 C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~ 469 (483)
+.++++|........+|.+ .|+++.|+|+|.|++||.+..++.+|+++
T Consensus 121 ~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp EEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 4577888764321123864 89999999999999999998889999763
No 110
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=95.59 E-value=0.0044 Score=61.30 Aligned_cols=84 Identities=19% Similarity=0.399 Sum_probs=25.3
Q ss_pred CCCeeEeCCCCceeCCCCCccccCCcCCCCCCCCCCCCCCCCCCEE-eeCCCCeeEE-CCCCCeeccCCCceeeCCCccC
Q psy11799 291 LGGYKCGCPEGYVRHPFSNECIDDNECARNPCEPSSNTTGERGGKC-FNTAGSYRCG-CPDGFQFEAALQLCTQLSSSCL 368 (483)
Q Consensus 291 ~g~~~C~C~~G~~g~~~~~~C~~~~~C~~~~C~~~~~~~c~~~g~C-~~~~g~~~C~-C~~G~~~~~~g~~C~~~~~~C~ 368 (483)
.+.+.|.|+++++|..|+ .|... ....|+.+ ++.+ +.....+.|. |+-++ .+..|+..
T Consensus 310 ~g~~~C~C~~~ttG~~CE-~C~pg--y~~~P~~~--------gt~~p~~~g~~~~C~pC~Cn~----~g~~CD~~----- 369 (426)
T 3zyj_B 310 NSKLTCECEHNTTGPDCG-KCKKN--YQGRPWSP--------GSYLPIPKGAANACIPSISSI----GTNVCDNE----- 369 (426)
T ss_dssp TTEEEECCCTTEESSSSC-EECTT--CCSSCCCC--------CBCCSSSSCBCCCCCCCCC-------------------
T ss_pred CCCceeeCCCCCcCCCcc-ccccc--cccCcccC--------CcccccCCCCCCcccCCCCCC----CcCccccC-----
Confidence 456899999999998886 23221 22235554 2111 1122334553 33334 34455432
Q ss_pred CCCCCCCcEECCCCCeeEeCCCCeeecC
Q psy11799 369 SSPCSFGCTPLGISGFSCECPSGYQRIG 396 (483)
Q Consensus 369 ~~~C~~~c~~~~~~~~~C~C~~Gy~g~~ 396 (483)
..+|.++.++.. .. +|.|++||+|..
T Consensus 370 t~~C~ngg~C~~-~~-~C~C~~G~~G~~ 395 (426)
T 3zyj_B 370 LLHCQNGGTCHN-NV-RCLCPAAYTGIL 395 (426)
T ss_dssp ----------------------------
T ss_pred cccCCCCCCcCC-CC-CCcCCCCCcCCC
Confidence 357888766655 33 899999999865
No 111
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.57 E-value=0.0038 Score=53.65 Aligned_cols=34 Identities=35% Similarity=0.870 Sum_probs=28.4
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCCC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECT 176 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C~ 176 (483)
|.++|+|++..++|+|+|++||. |..|+.+++|.
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~ 160 (162)
T 1g1s_A 127 CSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDD 160 (162)
T ss_dssp GGGSEEEEECSSSEEEEECTTEE----STTSCEECC--
T ss_pred CCCCCEEecCCCCceEeCCCCCc----CcccccCcccC
Confidence 98899999999999999999999 56787666664
No 112
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.01 E-value=0.03 Score=42.93 Aligned_cols=69 Identities=20% Similarity=0.535 Sum_probs=45.7
Q ss_pred cCCCCCCCC--cEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEee
Q psy11799 367 CLSSPCSFG--CTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCIN 444 (483)
Q Consensus 367 C~~~~C~~~--c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~ 444 (483)
|....|... |.....+..+|.|.+||.+++ ..|+.... ..|+.... -|..+|+|..
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-~~Cv~~~~------------------~sC~~nNG---GCd~nA~C~~ 64 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEG-DKCVENPN------------------PTCNENNG---GCDADAKCTE 64 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEET-TEEEECSC------------------CCSTTGGG---GCCTTEEEEC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCC-CeEeeCCC------------------CChhhcCC---CcCCCceeEe
Confidence 333344433 555444788999999999975 34433211 35554322 5889999996
Q ss_pred CC-----CCeeeeCCCCc
Q psy11799 445 TM-----GSFRCLCPRGF 457 (483)
Q Consensus 445 ~~-----g~~~C~C~~G~ 457 (483)
.. +...|+|.+||
T Consensus 65 ~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 65 EDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CSCSSSSCCCEEEECSTT
T ss_pred cCCcccCCceEeEeCCCC
Confidence 54 67999999997
No 113
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.94 E-value=0.013 Score=50.39 Aligned_cols=35 Identities=23% Similarity=0.665 Sum_probs=29.4
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCCCcCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDECT 473 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~C~ 473 (483)
+|.++++|++..++|.|.|++|| .|..|+.+.+|.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~----~g~~C~~~~~c~ 160 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGY----YGPQCQFVQVDP 160 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTC----BSSSSCBC----
T ss_pred cCCCCCeecccCCCceeeeCCCc----ccccccccccCc
Confidence 89999999999999999999999 788999988886
No 114
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.23 E-value=0.14 Score=39.55 Aligned_cols=78 Identities=18% Similarity=0.390 Sum_probs=50.8
Q ss_pred ccCCCCCCCC--cEECCCCCeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccc-cccCCCCccCCCCCCeE
Q psy11799 366 SCLSSPCSFG--CTPLGISGFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDE-CKEEINGVAVCPKPGTC 442 (483)
Q Consensus 366 ~C~~~~C~~~--c~~~~~~~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~-C~~~~~~~~~C~~~g~C 442 (483)
.|....|..+ |.....+..+|.|..||.+++ ..|..++. |...-. -|..+|.|
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg---------------------~~Cv~~Np~C~~nNG---GCd~nAeC 67 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVG---------------------GKCVPASITCEENNG---GCAPEAEC 67 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECS---------------------SSEEECCCCTTSGGG---GSCTTSEE
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccC---------------------CEEEECCcchhhcCC---CcCCCcEe
Confidence 3443445433 676444888999999999975 22444455 543322 58999999
Q ss_pred eeCC-CCeeeeCCCCcccC-CCCCCCC
Q psy11799 443 INTM-GSFRCLCPRGFKLD-RTGTFCL 467 (483)
Q Consensus 443 ~~~~-g~~~C~C~~G~~~~-~~g~~C~ 467 (483)
.... ..-.|.|.++|.-. ..|..|.
T Consensus 68 ~~~~~~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 68 TMDDKKEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp EECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred EECCCCEEEeECCCCCCccccceEEEC
Confidence 9774 78999999997211 0455554
No 115
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.81 E-value=0.027 Score=54.84 Aligned_cols=42 Identities=40% Similarity=0.952 Sum_probs=27.6
Q ss_pred cchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccC
Q psy11799 191 INECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 191 ~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
++||. .+..|...|++..++|.|.|++||.+.++++.|...+
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccc
Confidence 35666 4667889999999999999999999999999996543
No 116
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=93.79 E-value=0.027 Score=53.14 Aligned_cols=46 Identities=30% Similarity=0.766 Sum_probs=38.6
Q ss_pred cchhccC-CCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccccCccc
Q psy11799 191 INECLEL-SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCIDINECE 236 (483)
Q Consensus 191 ~~~C~~~-~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~~~~C~ 236 (483)
.|+|... +..|...|.+..++|+|.|..||.+..+++.|...++|.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 4667666 678889999999999999999999999999998766653
No 117
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.59 E-value=0.055 Score=46.05 Aligned_cols=42 Identities=38% Similarity=0.820 Sum_probs=31.6
Q ss_pred ccchhccC-CCCCCCeEEeCCCCeEEeCCCCceeCCCCCcccc
Q psy11799 190 DINECLEL-SNQCAFRCHNVPGSFRCICPYGYALAPDGRHCID 231 (483)
Q Consensus 190 ~~~~C~~~-~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~~ 231 (483)
++++|... ...|.+.|.+..++|+|.|.+||++..+++.|++
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 34444432 2356678999999999999999999888888853
No 118
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=93.34 E-value=0.049 Score=44.24 Aligned_cols=29 Identities=34% Similarity=0.921 Sum_probs=25.0
Q ss_pred CCCCCCeEeeCC--CCe-eeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCINTM--GSF-RCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~~~~--g~~-~C~C~~G~~~~~~g~~C~ 467 (483)
||.|+|+|++.. .+| +|.|++|| .|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~----~G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKF----GGQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTE----ESTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCC----CCcccc
Confidence 799999999874 555 99999999 788887
No 119
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.12 E-value=0.071 Score=35.60 Aligned_cols=31 Identities=29% Similarity=0.666 Sum_probs=25.1
Q ss_pred CCCCCCeEee--CCCCeeeeCCCCcccCCCCCCCCCCc
Q psy11799 435 VCPKPGTCIN--TMGSFRCLCPRGFKLDRTGTFCLDQD 470 (483)
Q Consensus 435 ~C~~~g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~~~ 470 (483)
.|.++ +|.- ..+.+.|.|++|| +|.+|+..+
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy----~G~RCe~~d 47 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGY----VGARCEHAD 47 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCC----cccCCCcee
Confidence 79886 9984 4467999999999 888888644
No 120
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.97 E-value=0.064 Score=55.40 Aligned_cols=36 Identities=25% Similarity=0.842 Sum_probs=30.8
Q ss_pred ccccccCCCCccCCCCCCeEee-CCCceEeeCC-CCCeeCCCCCccc
Q psy11799 126 MDECKEEINGVAVCPKPGTCIN-TMGSFRCLCP-RGFKLDRTGTFCL 170 (483)
Q Consensus 126 ~~~C~~~~~~~~~C~~~g~C~~-~~g~~~C~C~-~G~~g~~~g~~C~ 170 (483)
+|+|..+ | |+++|+|++ ..++|+|.|. +||+ |..|+
T Consensus 2 ~d~C~~~-P----C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYY-P----CQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGGGC-C----CCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCCCC-C----CCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 4778764 4 999999999 8999999999 9999 66675
No 121
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.90 E-value=0.044 Score=36.68 Aligned_cols=29 Identities=31% Similarity=0.775 Sum_probs=24.2
Q ss_pred CCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
.|.| |+|. ...+.+.|+|++|| +|..|+.
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy----~G~RCe~ 45 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGY----IGARCER 45 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTE----ETTTTCE
T ss_pred cccC-CEEEeEcCCCCeEEECCCCc----ccCCCCe
Confidence 7988 7996 55667999999999 7888874
No 122
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.43 E-value=0.11 Score=44.13 Aligned_cols=44 Identities=27% Similarity=0.570 Sum_probs=33.5
Q ss_pred cccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccc
Q psy11799 123 FLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 123 C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
+.++++|... ...+| ...|++..++|+|.|.+||.+..+++.|.
T Consensus 114 ~~d~~eC~~~--~~~~C--~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 114 ATDINECTDF--VDVPC--SHFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEECCTTTC---CCCCS--SSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cccCcccCCC--CCCCC--CCcccCcCCCEEEecCCCcEECCCCCccc
Confidence 3478899753 11237 46899999999999999999887777775
No 123
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.97 E-value=0.063 Score=55.47 Aligned_cols=37 Identities=32% Similarity=0.826 Sum_probs=32.1
Q ss_pred CCcCCCCCCCCCCCCCCCCCCEEee-CCCCeeEECC-CCCeeccCCCceee
Q psy11799 314 DNECARNPCEPSSNTTGERGGKCFN-TAGSYRCGCP-DGFQFEAALQLCTQ 362 (483)
Q Consensus 314 ~~~C~~~~C~~~~~~~c~~~g~C~~-~~g~~~C~C~-~G~~~~~~g~~C~~ 362 (483)
+++|..+||++ +|+|++ ..++|.|.|+ +|| .|+.|+.
T Consensus 2 ~d~C~~~PC~n--------gG~C~~~~~~~y~C~C~~~G~----~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQH--------QGICVRFGLDRYQCDCTRTGY----SGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCT--------TCEEEEETTTEEEEECTTSSE----ETTTTCE
T ss_pred CCcCCCCCCCC--------CCCcCCCCCCceEeeCCCCCc----CCCCCCC
Confidence 56898899999 999999 8999999999 999 5667763
No 124
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=91.57 E-value=0.1 Score=54.00 Aligned_cols=36 Identities=28% Similarity=0.880 Sum_probs=29.2
Q ss_pred ccccccCCCCccCCCCCCeEee-CCCceEeeCC-CCCeeCCCCCccc
Q psy11799 126 MDECKEEINGVAVCPKPGTCIN-TMGSFRCLCP-RGFKLDRTGTFCL 170 (483)
Q Consensus 126 ~~~C~~~~~~~~~C~~~g~C~~-~~g~~~C~C~-~G~~g~~~g~~C~ 170 (483)
+|+|..+ | |+++|+|++ ..++|.|.|+ +||+ |.+|+
T Consensus 1 vd~C~s~-P----C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSN-P----CQNRGECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp CCTTTTC-C----CCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCCCC-C----CCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 4678754 3 999999996 4689999999 9999 66775
No 125
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.30 E-value=0.22 Score=41.65 Aligned_cols=28 Identities=36% Similarity=1.024 Sum_probs=23.1
Q ss_pred CCCCCeEeeC--CCce-EeeCCCCCeeCCCCCccc
Q psy11799 139 CPKPGTCINT--MGSF-RCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 139 C~~~g~C~~~--~g~~-~C~C~~G~~g~~~g~~C~ 170 (483)
|.|+|+|+.. ...| +|.|++||. |..|+
T Consensus 15 C~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Ce 45 (145)
T 2i9a_A 15 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE 45 (145)
T ss_dssp CCTTCEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred CCCCCCcCCCccccCCccccCCCCCC----CCcee
Confidence 9999999876 3556 899999999 66665
No 126
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.05 E-value=0.11 Score=44.31 Aligned_cols=33 Identities=24% Similarity=0.712 Sum_probs=26.6
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeCCCCCccccCCCC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLDQDEC 175 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~~~~~C 175 (483)
|+++|+|++..++|.|+|.+||. |..|+...+|
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c 159 (164)
T 3cfw_A 127 CSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVD 159 (164)
T ss_dssp SCSSEEEEEETTEEEEEECTTCB----SSSSCBC---
T ss_pred CCCCCeecccCCCceeeeCCCcc----cccccccccC
Confidence 98999999999999999999999 5567655544
No 127
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.79 E-value=0.12 Score=53.67 Aligned_cols=36 Identities=39% Similarity=1.014 Sum_probs=30.5
Q ss_pred CCcCCCCCCCCCCCCCCCCCCEEee-CCCCeeEECC-CCCeeccCCCcee
Q psy11799 314 DNECARNPCEPSSNTTGERGGKCFN-TAGSYRCGCP-DGFQFEAALQLCT 361 (483)
Q Consensus 314 ~~~C~~~~C~~~~~~~c~~~g~C~~-~~g~~~C~C~-~G~~~~~~g~~C~ 361 (483)
+++|..+||++ +|+|++ ..++|.|.|+ +|| .|+.|+
T Consensus 1 vd~C~s~PC~n--------gG~C~~~~~~~y~C~C~~~G~----~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQN--------RGECMSTGFDQYKCDCTRTGF----YGENCT 38 (587)
T ss_dssp CCTTTTCCCCT--------TCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred CCCCCCCCCCC--------CCEeeCCCCCCeEEecCCCCc----cCCCCC
Confidence 46799999999 999996 4589999999 999 666776
No 128
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.50 E-value=0.22 Score=33.15 Aligned_cols=29 Identities=24% Similarity=0.764 Sum_probs=23.5
Q ss_pred CCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
.|.+ |+|. ...+.+.|.|+.|| +|..|+.
T Consensus 19 yC~n-G~C~~i~~~~~~~C~C~~gy----~G~RCe~ 49 (50)
T 2rnl_A 19 FCIH-GECKYIEHLEAVTCKCQQEY----FGERCGE 49 (50)
T ss_dssp TCSS-SEEEEETTTTEEEEECCSSC----CSSSCCC
T ss_pred cCCC-CEEEEecCCCCeeEECCCCc----ccccccc
Confidence 7886 6997 55667899999999 7877763
No 129
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=89.71 E-value=0.4 Score=31.92 Aligned_cols=25 Identities=24% Similarity=0.713 Sum_probs=19.4
Q ss_pred CCCCCeEe--eCCCceEeeCCCCCeeCC
Q psy11799 139 CPKPGTCI--NTMGSFRCLCPRGFKLDR 164 (483)
Q Consensus 139 C~~~g~C~--~~~g~~~C~C~~G~~g~~ 164 (483)
|. +|+|. ...+.+.|+|++||+|.+
T Consensus 20 C~-nG~C~~i~~~~~~~C~C~~gy~G~R 46 (50)
T 2rnl_A 20 CI-HGECKYIEHLEAVTCKCQQEYFGER 46 (50)
T ss_dssp CS-SSEEEEETTTTEEEEECCSSCCSSS
T ss_pred CC-CCEEEEecCCCCeeEECCCCccccc
Confidence 85 47998 446678999999999543
No 130
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=89.61 E-value=0.29 Score=32.57 Aligned_cols=29 Identities=31% Similarity=0.716 Sum_probs=21.5
Q ss_pred CCCCCeEeeC--CCceEeeCCCCCeeCCCCCccccC
Q psy11799 139 CPKPGTCINT--MGSFRCLCPRGFKLDRTGTFCLDQ 172 (483)
Q Consensus 139 C~~~g~C~~~--~g~~~C~C~~G~~g~~~g~~C~~~ 172 (483)
|.+ |+|... ...+.|.|++||+ |..|+..
T Consensus 16 C~n-G~C~~~~~~~~~~C~C~~gy~----G~RCe~~ 46 (50)
T 3e50_C 16 CFH-GTCRFLVQEDKPACVCHSGYV----GARCEHA 46 (50)
T ss_pred ccC-CEEeeccCCCCeEEECCCCCc----ccCCCce
Confidence 855 499864 4679999999999 5556533
No 131
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.58 E-value=0.19 Score=43.41 Aligned_cols=27 Identities=37% Similarity=0.893 Sum_probs=23.1
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
+|.|+|.|+... +|.|++|| .|..|+.
T Consensus 154 ~C~ngG~Cv~P~---~C~C~~Gw----~G~~C~~ 180 (188)
T 2ygo_A 154 GCRNGGFCNERR---ICECPDGF----HGPHCEG 180 (188)
T ss_dssp CCCTTCEECTTS---CEECCTTC----BTTTTCB
T ss_pred CCCCCCEeCCCC---cccCcCCC----CCCCCcC
Confidence 799999999644 79999999 7888874
No 132
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=89.15 E-value=0.23 Score=46.55 Aligned_cols=47 Identities=38% Similarity=0.853 Sum_probs=38.4
Q ss_pred cCcccCC-CCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCccccC
Q psy11799 232 INECEQF-PGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSDECAT 279 (483)
Q Consensus 232 ~~~C~~~-~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~~C~~ 279 (483)
.++|... +..+.+.|.++.++|+|.|.+||.+..++. .|.+.++|.-
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~-sC~p~~~c~C 49 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHK-QCVPHDQCAC 49 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSS-CEEECSTTCT
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCC-cccccccccc
Confidence 4678766 677889999999999999999999888776 8888776653
No 133
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=89.04 E-value=0.26 Score=32.88 Aligned_cols=27 Identities=33% Similarity=0.830 Sum_probs=21.1
Q ss_pred CCCCCeEe--eCCCceEeeCCCCCeeCCCCCccc
Q psy11799 139 CPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 139 C~~~g~C~--~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
|.+ |+|. ...+.+.|+|++||+ |..|+
T Consensus 16 C~n-G~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 16 CIK-GRCRFVVAEQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp CTT-CCEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred ccC-CEEEeEcCCCCeEEECCCCcc----cCCCC
Confidence 866 8997 446678999999999 55565
No 134
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=87.72 E-value=0.27 Score=47.57 Aligned_cols=42 Identities=40% Similarity=0.982 Sum_probs=26.1
Q ss_pred cCcccCCCCCCCCeeeeCCCCceEeCCCCceecCCCCCccccCc
Q psy11799 232 INECEQFPGLCAHTCTNTEGSYTCGCHPGFELSSDGSGTCLDSD 275 (483)
Q Consensus 232 ~~~C~~~~~~~~~~C~~~~g~~~C~C~~G~~~~~~g~~~C~~~~ 275 (483)
+++|. .+..|.+.|.++.++|.|.|++||.+..++. .|...+
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~-~C~~~~ 42 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRR-SCKALG 42 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSS-CEEESS
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCC-cccccc
Confidence 46676 4566788999999999999999999987776 776543
No 135
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=87.55 E-value=0.35 Score=40.38 Aligned_cols=29 Identities=34% Similarity=0.956 Sum_probs=24.5
Q ss_pred CCCCCCeEeeC--CCCe-eeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCINT--MGSF-RCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~~~--~g~~-~C~C~~G~~~~~~g~~C~ 467 (483)
||+|+|+|+.. ...| +|.|++|| .|..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~----~G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKF----GGQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTE----ESTTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCC----CCCcee
Confidence 89999999875 3455 89999999 788887
No 136
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.40 E-value=0.45 Score=45.26 Aligned_cols=41 Identities=37% Similarity=0.848 Sum_probs=33.7
Q ss_pred ccchhccC---CCCCCCeEEeCC------CCeEEeCCCCceeCCCCCccc
Q psy11799 190 DINECLEL---SNQCAFRCHNVP------GSFRCICPYGYALAPDGRHCI 230 (483)
Q Consensus 190 ~~~~C~~~---~~~C~~~C~~~~------gs~~C~C~~G~~~~~~g~~C~ 230 (483)
..++|... +..|...|.+.+ ++|+|.|+.||.+..++++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 45677765 667889999875 589999999999999999885
No 137
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=87.35 E-value=0.2 Score=36.76 Aligned_cols=29 Identities=24% Similarity=0.748 Sum_probs=22.8
Q ss_pred CCCCCCeEe--eCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCI--NTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
.|.|+ +|+ ...+.+.|.|++|| +|..|+.
T Consensus 47 yClnG-~C~~i~~~~~~~C~C~~GY----tG~RCE~ 77 (79)
T 1xdt_R 47 FCIHG-ECKYVKELRAPSCICHPGY----HGERCHG 77 (79)
T ss_dssp CCSSE-EECCBGGGTBCCEEECTTE----ESTTCCE
T ss_pred cCCCC-EeeeecCCCCeEEEcCCCc----ccccccc
Confidence 79885 995 34467899999999 7877763
No 138
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=86.78 E-value=0.43 Score=45.55 Aligned_cols=43 Identities=33% Similarity=0.683 Sum_probs=34.6
Q ss_pred cchhccCCCCCCCeEEeCCC--CeEEeCCCCceeCCCCCcccccC
Q psy11799 191 INECLELSNQCAFRCHNVPG--SFRCICPYGYALAPDGRHCIDIN 233 (483)
Q Consensus 191 ~~~C~~~~~~C~~~C~~~~g--s~~C~C~~G~~~~~~g~~C~~~~ 233 (483)
.++|...+..|...|...++ +|+|.|+.||.+..++++|.+-+
T Consensus 267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 46676666788899998865 79999999999999999997643
No 139
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.73 E-value=0.2 Score=42.24 Aligned_cols=29 Identities=34% Similarity=0.999 Sum_probs=26.7
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
||.+++.|.+...+|.|.|.+|| +|..|+
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~----~g~~Ce 154 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGF----SGLKCE 154 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTE----ESTTSC
T ss_pred CCCCCCEeecCCCCeeEECCCCc----cCcccc
Confidence 89999999999999999999999 777886
No 140
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=86.60 E-value=0.36 Score=41.73 Aligned_cols=37 Identities=32% Similarity=0.836 Sum_probs=27.1
Q ss_pred ccccccccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccc
Q psy11799 120 YSVFLDMDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 120 ~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
...|.. ..|... |.|+|.|+... +|.|++||. |..|+
T Consensus 143 ~K~C~~-~~C~~~------C~ngG~Cv~P~---~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 143 FKTCQQ-AECPGG------CRNGGFCNERR---ICECPDGFH----GPHCE 179 (188)
T ss_dssp EEEECC-CCCTTC------CCTTCEECTTS---CEECCTTCB----TTTTC
T ss_pred cccccC-CccCCC------CCCCCEeCCCC---cccCcCCCC----CCCCc
Confidence 345542 456542 99999999766 799999999 66665
No 141
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=85.29 E-value=0.49 Score=46.16 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=20.7
Q ss_pred CCeeE-eCCCCeeecCCcceecccCCCCCCCcccCC
Q psy11799 382 SGFSC-ECPSGYQRIGQGHCLATISSGLYPGFRSYE 416 (483)
Q Consensus 382 ~~~~C-~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~ 416 (483)
..++| .|++||+|....+ |.+||++..
T Consensus 332 ~~G~C~~C~~n~~G~~Ce~--------C~~Gyyg~~ 359 (375)
T 4aqt_A 332 HGGHCTNCRDNTDGAKCER--------CRENFFRLG 359 (375)
T ss_dssp CCEEECSCTTTEESTTSCE--------ECSSEECCT
T ss_pred CCCCCCCCCCCCcCCCCCC--------CCcCcccCc
Confidence 56788 4999999987443 678898864
No 142
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.56 E-value=0.59 Score=49.23 Aligned_cols=42 Identities=40% Similarity=0.900 Sum_probs=36.7
Q ss_pred ccchhccCCCCCCCeEEeCC-CCeEEeCCCCceeCCCCCcccc
Q psy11799 190 DINECLELSNQCAFRCHNVP-GSFRCICPYGYALAPDGRHCID 231 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~-gs~~C~C~~G~~~~~~g~~C~~ 231 (483)
.+++|...+..|...|.+.+ ++|+|.|++||.+..++++|..
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 46788777778889999988 8999999999999999999954
No 143
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=84.48 E-value=0.63 Score=46.11 Aligned_cols=36 Identities=33% Similarity=0.991 Sum_probs=30.6
Q ss_pred cccccCCCCccCCCCCCeEeeCCCCeeeeCCC-CcccCCCCCCCCC
Q psy11799 424 DECKEEINGVAVCPKPGTCINTMGSFRCLCPR-GFKLDRTGTFCLD 468 (483)
Q Consensus 424 ~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~-G~~~~~~g~~C~~ 468 (483)
+.|... ||.++|+|++..++|.|.|+. || .|..|+.
T Consensus 186 ~~C~~~-----pC~n~g~C~~~~~~~~C~C~~~~~----~G~~C~~ 222 (410)
T 3asi_A 186 TTCQED-----SCSNQGVCLQQWDGFSCDCSMTSF----SGPLCND 222 (410)
T ss_dssp SCCCTT-----SSSTTCEEEECSSSEEEECTTTSE----ESTTSCE
T ss_pred CCcccc-----cCCCCCEecCCCCCceEeccCCcc----cCCCCCC
Confidence 556553 999999999999999999996 99 7888874
No 144
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=83.95 E-value=0.3 Score=41.10 Aligned_cols=36 Identities=33% Similarity=0.868 Sum_probs=28.7
Q ss_pred CcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeeccCCCceee
Q psy11799 315 NECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFEAALQLCTQ 362 (483)
Q Consensus 315 ~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 362 (483)
++|..+||.+ ++.|.+....|.|.|.+|| .|..|+.
T Consensus 120 ~~~~~~pc~~--------~g~C~~~~~~~~c~C~~g~----~g~~Ce~ 155 (157)
T 1g1t_A 120 AACTNTSCSG--------HGECVETINNYTCKCDPGF----SGLKCEQ 155 (157)
T ss_dssp CCCCTTGGGG--------SEEEEEETTEEEEEECTTE----ESTTSCE
T ss_pred CCCCCCCCCC--------CCEeecCCCCeeEECCCCc----cCccccc
Confidence 3466667877 8999999999999999999 4556654
No 145
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=82.76 E-value=0.7 Score=48.53 Aligned_cols=41 Identities=37% Similarity=0.867 Sum_probs=36.6
Q ss_pred ccchhccCCCCCCCeEEeCCCCeEEeCCCCceeCCCCCccc
Q psy11799 190 DINECLELSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCI 230 (483)
Q Consensus 190 ~~~~C~~~~~~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~ 230 (483)
..++|...+..|...|.+.+++|+|.|+.||.+.+++++|.
T Consensus 577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 46788887888999999999999999999999999998885
No 146
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=82.65 E-value=0.37 Score=47.01 Aligned_cols=21 Identities=10% Similarity=0.007 Sum_probs=17.6
Q ss_pred CceEEEeCCCCeeeEeeecCC
Q psy11799 29 GIFVWSLASQWTGEILTNVSP 49 (483)
Q Consensus 29 g~~~C~C~~g~~G~~C~~c~~ 49 (483)
+++.|.|+++|+|..|+.|.+
T Consensus 270 ~~~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 270 DKLMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp SCEEECCCTTEESTTSCEECT
T ss_pred CCeeeeCcCCCcCCCcccCCC
Confidence 457899999999999997653
No 147
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=80.82 E-value=3.6 Score=40.35 Aligned_cols=38 Identities=24% Similarity=0.396 Sum_probs=26.1
Q ss_pred CCeeEe-CCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccc
Q psy11799 382 SGFSCE-CPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECK 427 (483)
Q Consensus 382 ~~~~C~-C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~ 427 (483)
.+.+|. |..+++|....+ |.+||+|.....-.+.+.|.
T Consensus 355 ~~G~C~~C~~nt~G~~CEr--------C~~GYyg~p~~~~~~~~~C~ 393 (403)
T 2y38_A 355 GGGVCLDCQHHTTGINCER--------CLPGFFRAPDQPLDSPHVCR 393 (403)
T ss_dssp CCEEESSCCSSEESTTSCE--------ECTTCEECTTSCTTSTTSEE
T ss_pred CCCCCCCCcCcCcCCCCCc--------CCCCccCCCCCCCCCCCccc
Confidence 568995 999999987554 66899987633333444454
No 148
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=76.83 E-value=1.6 Score=43.13 Aligned_cols=37 Identities=24% Similarity=0.785 Sum_probs=30.6
Q ss_pred CCcCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCC-CCeeccCCCceee
Q psy11799 314 DNECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPD-GFQFEAALQLCTQ 362 (483)
Q Consensus 314 ~~~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~-G~~~~~~g~~C~~ 362 (483)
.+.|..+||.+ +|+|++..++|.|.|+. +| .|+.|+.
T Consensus 185 ~~~C~~~pC~n--------~g~C~~~~~~~~C~C~~~~~----~G~~C~~ 222 (410)
T 3asi_A 185 STTCQEDSCSN--------QGVCLQQWDGFSCDCSMTSF----SGPLCND 222 (410)
T ss_dssp SSCCCTTSSST--------TCEEEECSSSEEEECTTTSE----ESTTSCE
T ss_pred CCCcccccCCC--------CCEecCCCCCceEeccCCcc----cCCCCCC
Confidence 45788889988 99999999999999996 99 5556653
No 149
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=76.29 E-value=0.9 Score=33.30 Aligned_cols=25 Identities=24% Similarity=0.574 Sum_probs=17.8
Q ss_pred CEEee--CCCCeeEECCCCCeeccCCCceee
Q psy11799 334 GKCFN--TAGSYRCGCPDGFQFEAALQLCTQ 362 (483)
Q Consensus 334 g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~ 362 (483)
|+|+. ..+.+.|.|++|| +|..|+.
T Consensus 51 G~C~~i~~~~~~~C~C~~GY----tG~RCE~ 77 (79)
T 1xdt_R 51 GECKYVKELRAPSCICHPGY----HGERCHG 77 (79)
T ss_dssp EEECCBGGGTBCCEEECTTE----ESTTCCE
T ss_pred CEeeeecCCCCeEEEcCCCc----ccccccc
Confidence 48953 3467899999999 5555653
No 150
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.84 E-value=2.9 Score=39.67 Aligned_cols=31 Identities=32% Similarity=0.740 Sum_probs=25.4
Q ss_pred CeEeeCCC--CeeeeCCCCcccCCCCCCCCCCc
Q psy11799 440 GTCINTMG--SFRCLCPRGFKLDRTGTFCLDQD 470 (483)
Q Consensus 440 g~C~~~~g--~~~C~C~~G~~~~~~g~~C~~~~ 470 (483)
..|+..++ +|+|.|+.||.+..++++|.+.+
T Consensus 279 ~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 279 HLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp SEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred eEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 47887665 79999999999999999999754
No 151
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=71.23 E-value=4.6 Score=38.02 Aligned_cols=27 Identities=26% Similarity=0.872 Sum_probs=23.4
Q ss_pred EEeeCC------CCeeEECCCCCeeccCCCcee
Q psy11799 335 KCFNTA------GSYRCGCPDGFQFEAALQLCT 361 (483)
Q Consensus 335 ~C~~~~------g~~~C~C~~G~~~~~~g~~C~ 361 (483)
.|.+.+ ++|+|.|+.||.+..+++.|.
T Consensus 283 ~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 283 LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 898765 589999999999988888885
No 152
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=70.65 E-value=9 Score=28.73 Aligned_cols=64 Identities=22% Similarity=0.410 Sum_probs=45.2
Q ss_pred CCCCCeEeeC-CCceEeeCCCCCeeCCCCCccccCCCCCCCCCccCCCccccccchhccCCCCCC--CeEEeCC-CCeEE
Q psy11799 139 CPKPGTCINT-MGSFRCLCPRGFKLDRTGTFCLDQDECTDDSKCREGCQTCEDINECLELSNQCA--FRCHNVP-GSFRC 214 (483)
Q Consensus 139 C~~~g~C~~~-~g~~~C~C~~G~~g~~~g~~C~~~~~C~~~~~C~~g~~~C~~~~~C~~~~~~C~--~~C~~~~-gs~~C 214 (483)
|+.++.|.+. .+.-.|+|..+|.-+ +..|+... ...|..+.++|. +.|.... ..-.|
T Consensus 12 cp~NA~Cyr~~dg~EecRCllnykk~--~~kCV~~~-----------------~~~C~~NNGGCd~nA~C~~~~~~kIvC 72 (95)
T 1b9w_A 12 VPENAACYRYLDGTEEWRCLLYFKED--AGKCVPAP-----------------NMTCKDKNGGCAPEAECKMNDKNEIVC 72 (95)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEEE--TTEEEECT-----------------TCCTTTGGGGSCTTSEEEECTTSCEEE
T ss_pred CCCCcCeEEEcCCCEEEEEECCeEec--CCEEEcCC-----------------CCCccccCCCcCCCcceeecCCCcEEE
Confidence 8889999985 578899999999854 44565221 123444455555 8888777 67899
Q ss_pred eCCCCce
Q psy11799 215 ICPYGYA 221 (483)
Q Consensus 215 ~C~~G~~ 221 (483)
+|...+.
T Consensus 73 ~C~~~~~ 79 (95)
T 1b9w_A 73 KCTKEGS 79 (95)
T ss_dssp ECCSTTE
T ss_pred ECCCCCC
Confidence 9988864
No 153
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=70.10 E-value=3.1 Score=43.63 Aligned_cols=43 Identities=30% Similarity=0.771 Sum_probs=33.5
Q ss_pred cccccccCCCCccCCCCCCeEeeCC-CceEeeCCCCCeeCCCCCccccC
Q psy11799 125 DMDECKEEINGVAVCPKPGTCINTM-GSFRCLCPRGFKLDRTGTFCLDQ 172 (483)
Q Consensus 125 ~~~~C~~~~~~~~~C~~~g~C~~~~-g~~~C~C~~G~~g~~~g~~C~~~ 172 (483)
.+++|... ++. | ...|++.+ ++|+|.|++||.+..+++.|...
T Consensus 264 ~~n~C~~~-ng~--C--~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASS-NGH--C--SHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTT-GGG--C--SSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccC-CCC--c--chhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 45677653 344 6 46899988 99999999999998888888643
No 154
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=67.88 E-value=2.9 Score=47.68 Aligned_cols=30 Identities=33% Similarity=0.992 Sum_probs=27.4
Q ss_pred CCCCCCeEeeCCCCeeeeCC-CCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCP-RGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~-~G~~~~~~g~~C~~ 468 (483)
||.|+|+|++...+|.|.|+ +|| .|..|+.
T Consensus 1024 pC~ngG~C~~~~~~~~C~C~~~g~----~G~~C~~ 1054 (1245)
T 3qcw_A 1024 SCSNQGVCLQQWDGFSCDCSMTSF----SGPLCND 1054 (1245)
T ss_dssp SSSSSCEEEEETTEEEEECTTSSC----BSTTSCB
T ss_pred cCCCCCEeCCCCCCCEEECCCCCC----CCCCccC
Confidence 99999999998889999999 699 8888874
No 155
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=67.34 E-value=1.7 Score=45.67 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=32.0
Q ss_pred EeCCCCeeeEeee-------cCCCCcccCCceeeeccCcceeeeccc
Q psy11799 34 SLASQWTGEILTN-------VSPYPTSVNMASVSTRKGLTGVSVTRD 73 (483)
Q Consensus 34 ~C~~g~~G~~C~~-------c~~~~~~~~~~~C~c~~g~~g~~C~~~ 73 (483)
.|.+||+|++|.+ |+.+.-+.. +.|.|.+||+|..|..+
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCEE
T ss_pred ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCcc
Confidence 7899999999994 555555555 59999999999999864
No 156
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=64.74 E-value=4.2 Score=46.44 Aligned_cols=37 Identities=24% Similarity=0.710 Sum_probs=31.1
Q ss_pred ccccccCCCCccCCCCCCeEeeCCCCeeeeCC-CCcccCCCCCCCCC
Q psy11799 423 IDECKEEINGVAVCPKPGTCINTMGSFRCLCP-RGFKLDRTGTFCLD 468 (483)
Q Consensus 423 ~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~-~G~~~~~~g~~C~~ 468 (483)
.+.|... ||.++|+|++...+|.|.|+ .|| .|..|+.
T Consensus 619 ~~~C~~~-----pC~ngg~C~~~~~~~~C~C~~~g~----~G~~C~~ 656 (1245)
T 3qcw_A 619 AKPCLSN-----PCKNNGMCRDGWNRYVCDCSGTGY----LGRSCER 656 (1245)
T ss_dssp SCGGGSC-----CCCTTCEEEECSSSEEEECTTTTE----ESTTSCE
T ss_pred CCCCCcc-----CCCCCCEEeCCCCCeEEECCCCCc----ccccCcc
Confidence 4567554 99999999998899999999 799 7888863
No 157
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=64.58 E-value=4.3 Score=42.45 Aligned_cols=40 Identities=38% Similarity=0.848 Sum_probs=32.2
Q ss_pred ccccccCCCCccCCCCCCeEeeCCCceEeeCCCCCeeCCCCCccc
Q psy11799 126 MDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 126 ~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
.++|... ++. | ...|++.+++|+|.|+.||.+..+++.|.
T Consensus 578 ~~~C~~~-ng~--C--~~~C~~~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 578 SNPCAEE-NGG--C--SHLCLYRPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp CCGGGSG-GGG--C--SSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred cccCCCC-CCC--h--hHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence 5677654 444 7 56899999999999999999888888775
No 158
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=61.93 E-value=13 Score=36.44 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=19.9
Q ss_pred CeeEeCCCCeeecCCcceecccCCCCCCCcccCC
Q psy11799 383 GFSCECPSGYQRIGQGHCLATISSGLYPGFRSYE 416 (483)
Q Consensus 383 ~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~ 416 (483)
..+|.|..++.|....+ |.+||+|..
T Consensus 285 ~g~C~C~hnT~G~~CEr--------C~pGy~g~p 310 (403)
T 2y38_A 285 RLQCACQHNTCGGSCDR--------CCPGFNQQP 310 (403)
T ss_dssp CEEECCCTTEESSSCCE--------ECTTCCSSC
T ss_pred ceEeECcCcCcCCCCCC--------CCccccCCc
Confidence 35799999999987554 678888763
No 159
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=61.42 E-value=4 Score=41.87 Aligned_cols=58 Identities=29% Similarity=0.707 Sum_probs=39.5
Q ss_pred CeeEeCCCCeeecCCcceecccCCCCCCCcccCCCCCcccccccccCCCCccCCCCCCeEeeCCCCeeeeCCCCcc
Q psy11799 383 GFSCECPSGYQRIGQGHCLATISSGLYPGFRSYERPNLGDIDECKEEINGVAVCPKPGTCINTMGSFRCLCPRGFK 458 (483)
Q Consensus 383 ~~~C~C~~Gy~g~~~g~C~~~~~~~C~~g~~g~~~~~C~~~~~C~~~~~~~~~C~~~g~C~~~~g~~~C~C~~G~~ 458 (483)
.+.|.|.+||... ...|. .|++||.... .....|. +|..+.. ....|++.|+|..||.
T Consensus 262 ~G~C~C~~G~e~~-~~~C~-----aC~~g~~k~~----~~~~~C~-------~CP~~S~-s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 262 IGQCLCQAGYEKV-EDACQ-----ACSPGFFKFE----ASESPCL-------ECPEHTL-PSPEGATSCECEEGFF 319 (536)
T ss_dssp BCCCEECTTEEEE-TTEEE-----ECCTTEECCS----CCSSCCE-------ECCSSEE-CCCTTCSSCEECTTCB
T ss_pred cCcEeccCccccC-Cceee-----ecCCCCCccc----CCCCccc-------cCCCCCC-CCCCCccEEEEecccc
Confidence 3589999999854 34565 4889987543 1112342 6766554 4467899999999994
No 160
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=61.04 E-value=4.4 Score=40.98 Aligned_cols=41 Identities=24% Similarity=0.619 Sum_probs=30.6
Q ss_pred ccccccCCCCccCCCCCCeEeeC-CCceEeeCCCCCeeCCCCCccc
Q psy11799 126 MDECKEEINGVAVCPKPGTCINT-MGSFRCLCPRGFKLDRTGTFCL 170 (483)
Q Consensus 126 ~~~C~~~~~~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~g~~C~ 170 (483)
++.|... ..+||+.++.|+.. .+.|.|.|+.||.|. |..|.
T Consensus 18 ~~~c~~~--~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~--G~~c~ 59 (551)
T 3fby_A 18 QRFCPDG--SPSECHEHADCVLERDGSRSCVCAVGWAGN--GILCG 59 (551)
T ss_dssp CCBCTTS--SBCCCCTTEEEEECTTSCEEEEECTTEESS--SSSCE
T ss_pred cccCCCC--CCCCCCCCCeeEeCCCCCEecCCCCCCCCC--CcccC
Confidence 3556542 22349999999987 667999999999986 66664
No 161
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=57.74 E-value=5 Score=37.24 Aligned_cols=57 Identities=21% Similarity=0.511 Sum_probs=34.9
Q ss_pred eEeCCCCceeCCCCCccccCC--------cCCCCCCCCCCCCCCCCCCEEeeCCCCeeEECCCCCeec--cCCCcee
Q psy11799 295 KCGCPEGYVRHPFSNECIDDN--------ECARNPCEPSSNTTGERGGKCFNTAGSYRCGCPDGFQFE--AALQLCT 361 (483)
Q Consensus 295 ~C~C~~G~~g~~~~~~C~~~~--------~C~~~~C~~~~~~~c~~~g~C~~~~g~~~C~C~~G~~~~--~~g~~C~ 361 (483)
.|.|.+||+|..|+ |.... .|... .....|..+|.|+-. +|.|..++.+. ..|+.|+
T Consensus 208 ~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~----~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 208 ICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKD----NNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp EEEECTTEESTTSC--EECTTSCHHHHHHTTCSS----TTSCGGGGSEEEETT----EEEECCCSSTTCEEESTTSC
T ss_pred ceeCCCCCcCCcce--ecCCccccccccccCCCC----CCCCccCCCceEeCC----eeECcCCCCCCeeEeeEecc
Confidence 68999999999875 32211 35321 112233448999865 89998887554 3455543
No 162
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=53.73 E-value=3.4 Score=43.35 Aligned_cols=22 Identities=36% Similarity=0.992 Sum_probs=19.2
Q ss_pred CCCCCeEeeCCCceEeeCCCCCeeC
Q psy11799 139 CPKPGTCINTMGSFRCLCPRGFKLD 163 (483)
Q Consensus 139 C~~~g~C~~~~g~~~C~C~~G~~g~ 163 (483)
|..+|.|++.. .|+|.+||.|.
T Consensus 192 C~g~G~C~~~~---~C~C~~g~~g~ 213 (725)
T 2e26_A 192 CYGHGSCINGT---KCICDPGYSGP 213 (725)
T ss_dssp GGGSEEEETTT---EEEECTTEEST
T ss_pred cCCCcEecCCC---eeeccCCcccC
Confidence 98999998876 69999999954
No 163
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=51.51 E-value=45 Score=24.96 Aligned_cols=58 Identities=17% Similarity=0.432 Sum_probs=41.6
Q ss_pred CeEEeC-CCCeEEeCCCCceeCCCCCcccccC--cccCCCCCC--CCeeeeCC-CCceEeCCCCce
Q psy11799 203 FRCHNV-PGSFRCICPYGYALAPDGRHCIDIN--ECEQFPGLC--AHTCTNTE-GSYTCGCHPGFE 262 (483)
Q Consensus 203 ~~C~~~-~gs~~C~C~~G~~~~~~g~~C~~~~--~C~~~~~~~--~~~C~~~~-g~~~C~C~~G~~ 262 (483)
+.|+.. .+.-.|+|..+|... +..|+..+ .|..+...+ .+.|.... ....|.|...+.
T Consensus 16 A~Cyr~~dg~EecRCllnykk~--~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 16 AACYRYLDGTEEWRCLLYFKED--AGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp EEEEECTTSCEEEEECTTEEEE--TTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred cCeEEEcCCCEEEEEECCeEec--CCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 788885 567899999999853 66785433 565544444 67898776 567899987764
No 164
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=49.79 E-value=11 Score=22.22 Aligned_cols=20 Identities=35% Similarity=0.866 Sum_probs=15.7
Q ss_pred eEeCCCCeeecCCcceeccc
Q psy11799 385 SCECPSGYQRIGQGHCLATI 404 (483)
Q Consensus 385 ~C~C~~Gy~g~~~g~C~~~~ 404 (483)
-|.|++||.-+..|.|+...
T Consensus 6 GC~C~~G~vrn~~G~CV~~~ 25 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIPIK 25 (32)
T ss_dssp EEEECTTEEECTTSCEEEGG
T ss_pred CCCcCCCcEECCCCCEECHH
Confidence 38999999988777777643
No 165
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=46.11 E-value=7.3 Score=36.15 Aligned_cols=15 Identities=7% Similarity=0.053 Sum_probs=12.8
Q ss_pred eEEEeCCCCeeeEee
Q psy11799 31 FVWSLASQWTGEILT 45 (483)
Q Consensus 31 ~~C~C~~g~~G~~C~ 45 (483)
..|.|.+||+|..|+
T Consensus 207 G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 207 GICRCDTGYIGKNCE 221 (280)
T ss_dssp TEEEECTTEESTTSC
T ss_pred CceeCCCCCcCCcce
Confidence 358999999999987
No 166
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=44.40 E-value=12 Score=37.72 Aligned_cols=32 Identities=28% Similarity=0.728 Sum_probs=26.2
Q ss_pred cCCCCCCeEeeC-CCCeeeeCCCCcccCCCCCCCC
Q psy11799 434 AVCPKPGTCINT-MGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 434 ~~C~~~g~C~~~-~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
++|..++.|+.. .+.|.|+|+.||.|+ |..|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~--G~~c~ 59 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGN--GILCG 59 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESS--SSSCE
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCC--CcccC
Confidence 489999999964 567999999999874 66664
No 167
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=37.56 E-value=25 Score=32.17 Aligned_cols=31 Identities=42% Similarity=1.056 Sum_probs=26.0
Q ss_pred CCCCeEEeCCCCeEEeCCCCceeCCCCCccc
Q psy11799 200 QCAFRCHNVPGSFRCICPYGYALAPDGRHCI 230 (483)
Q Consensus 200 ~C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~ 230 (483)
.|...|.+..+++.|.|.+||.+..+.+.|.
T Consensus 133 ~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 133 SCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 4557799999999999999999887777664
No 168
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=35.86 E-value=19 Score=33.02 Aligned_cols=31 Identities=29% Similarity=0.735 Sum_probs=25.9
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
.|. ..|.+..+++.|.|.+||.+..+...|.
T Consensus 133 ~c~--~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 133 SCD--HYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCC--cCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 564 4699999999999999999887777765
No 169
>3fcn_A AN alpha-helical protein of unknown function (PFA; DUF29 family protein, structural genomics; HET: MSE; 1.45A {Rhodospirillum rubrum atcc 11170}
Probab=33.99 E-value=8.7 Score=32.38 Aligned_cols=19 Identities=26% Similarity=0.261 Sum_probs=16.9
Q ss_pred cccccc------ccchhHHHHHhhh
Q psy11799 3 LLKARK------LETFDRELLIELL 21 (483)
Q Consensus 3 ~~~~~~------~~~~~~~~~~~~~ 21 (483)
|||+++ +..+|.|+|+|+.
T Consensus 23 lLr~~~~~~~~~~~~lD~enLiEEI 47 (164)
T 3fcn_A 23 GLRALSRSRRDLPDDLDLEHIAEEI 47 (164)
T ss_dssp HHHHHHHHCSSSCTTCCHHHHHHHH
T ss_pred HHHcCCccccccchHhhHHHHHHHH
Confidence 689999 9999999998875
No 170
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=31.46 E-value=74 Score=21.75 Aligned_cols=19 Identities=42% Similarity=1.029 Sum_probs=15.8
Q ss_pred eEeCC--CCeeecCCcceecc
Q psy11799 385 SCECP--SGYQRIGQGHCLAT 403 (483)
Q Consensus 385 ~C~C~--~Gy~g~~~g~C~~~ 403 (483)
-|.|+ +||..+..|+||..
T Consensus 37 gC~C~~~~G~vr~~~g~CV~~ 57 (62)
T 1ata_A 37 RCECIASAGFVRDAQGNCIKF 57 (62)
T ss_dssp EEECCTTTTEEEETTTEEEES
T ss_pred CcCcCCCCCeEECCCCCEECH
Confidence 69999 99998777888764
No 171
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=28.77 E-value=36 Score=31.27 Aligned_cols=30 Identities=33% Similarity=0.892 Sum_probs=25.5
Q ss_pred CCCeEEeCCCCeEEeCCCCceeCCCCCccc
Q psy11799 201 CAFRCHNVPGSFRCICPYGYALAPDGRHCI 230 (483)
Q Consensus 201 C~~~C~~~~gs~~C~C~~G~~~~~~g~~C~ 230 (483)
|...|.+..++|.|.|.+||.+..++..|.
T Consensus 133 c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 133 CDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCccccccCceEeecCCCceeccCCCCcc
Confidence 557899999999999999999887776664
No 172
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=24.90 E-value=33 Score=22.87 Aligned_cols=18 Identities=39% Similarity=1.165 Sum_probs=14.9
Q ss_pred EeCCCCeeecCCcceecc
Q psy11799 386 CECPSGYQRIGQGHCLAT 403 (483)
Q Consensus 386 C~C~~Gy~g~~~g~C~~~ 403 (483)
|.|++||..+..+.|+..
T Consensus 36 C~C~~G~v~~~~g~CV~~ 53 (56)
T 1ccv_A 36 CQCQEGFLRNGEGACVLP 53 (56)
T ss_dssp EEECTTCEEETTTEEECG
T ss_pred CcCCCCeeECCCCcccCh
Confidence 999999998776788764
No 173
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=22.95 E-value=52 Score=35.99 Aligned_cols=30 Identities=27% Similarity=0.562 Sum_probs=26.1
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCLD 468 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~ 468 (483)
||.++++++.......|+|++|| .|..|+.
T Consensus 504 PC~ngg~~~l~g~~C~C~C~~g~----~G~~Ce~ 533 (913)
T 3t5o_A 504 PCPNNGRPTLSGTECLCVCQSGT----YGENCEK 533 (913)
T ss_dssp CBTTTBEEEEETTEEEEECCTTB----CSTTSCC
T ss_pred CCCCCCEeecCCCceEEEccCCc----cccCccC
Confidence 89999999988888999999999 6666663
No 174
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=22.39 E-value=41 Score=30.93 Aligned_cols=31 Identities=26% Similarity=0.706 Sum_probs=25.7
Q ss_pred CCCCCCeEeeCCCCeeeeCCCCcccCCCCCCCC
Q psy11799 435 VCPKPGTCINTMGSFRCLCPRGFKLDRTGTFCL 467 (483)
Q Consensus 435 ~C~~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~ 467 (483)
.|. ..|.+..++|.|.|.+||.+..++..|.
T Consensus 132 ~c~--~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 132 PCD--HYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CCS--SEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCC--CccccccCceEeecCCCceeccCCCCcc
Confidence 464 4799999999999999999887777665
Done!