BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1180
(140 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 128 bits (321), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Query: 6 CLD-IKGDFPFAIIGDENRDLAVXXXXXXXXXXXXXXTAITVRAVYIIGPDRKLKLSIVY 64
CL +KGD P+ II DE R+LAV +T RAV+IIGPD+KLKLSI+Y
Sbjct: 86 CLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILY 145
Query: 65 PASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVMIHPAVKDDELPKLFPKGVDI 124
PA+TGR+ EILRV+DSLQL + V TPA+W+PGD+ M+ P V +E LFP +++
Sbjct: 146 PATTGRNFSEILRVIDSLQLTAQKK-VATPADWQPGDRCMVVPGVSAEEAKTLFPN-MEV 203
Query: 125 VDMPSGVSYVRFT 137
+PSG Y+R+T
Sbjct: 204 KAVPSGKGYLRYT 216
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
Query: 13 FPFAIIGDENRDLAVXXXXXXXXXXXXXXTAITVRAVYIIGPDRKLKLSIVYPASTGRSV 72
PF II D NR+LA+ +T R V++ GPD+KLKLSI+YPA+TGR+
Sbjct: 98 LPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNF 157
Query: 73 DEILRVLDSLQLFYKNNTVVTPANWKPGDKVMIHPAVKDDELPKLFPKGVDIVDMPSGVS 132
DEILRV+ SLQL + V TP +WK GD VM+ P + ++E KLFPKGV ++PSG
Sbjct: 158 DEILRVVISLQLTAEKR-VATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKK 216
Query: 133 YVRFT 137
Y+R+T
Sbjct: 217 YLRYT 221
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 1 DIKNYCLDIKGDFPFAIIGDENRDLAVXXXXXXXXXXXXXXTAITVRAVYIIGPDRKLKL 60
DIK Y K + P I+ DE+R+LA +T R ++ I P++K+K
Sbjct: 85 DIKYYGKLNKWEIP--IVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKA 142
Query: 61 SIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVMIHPAVKDDELPKLFPK 120
+++YPA+TGR+ EILRVL SLQL Y V TP NW GDK + P ++DDE+ K F
Sbjct: 143 TVLYPATTGRNAHEILRVLKSLQLTY-TTPVATPVNWNEGDKCCVIPTLQDDEISKHFKN 201
Query: 121 GVDIVDMPSGVSYVRFTN 138
+ V+MPS Y+RF N
Sbjct: 202 EITKVEMPSKKKYLRFVN 219
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 1 DIKNYCLDIKGDFPFAIIGDENRDLAVXXXXXXXXXXXXXXTAITVRAVYIIGPDRKLKL 60
DIK Y K + P I+ DE+R+LA +T R ++ I P++K+K
Sbjct: 85 DIKYYGKLNKWEIP--IVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKA 142
Query: 61 SIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVMIHPAVKDDELPKLFPK 120
+++YPA+TGR+ EILRVL SLQL Y V TP NW GDK + P ++DDE+ K F
Sbjct: 143 TVLYPATTGRNAHEILRVLKSLQLTY-TTPVATPVNWNEGDKCCVIPTLQDDEISKHFKN 201
Query: 121 GVDIVDMPSGVSYVRFTN 138
+ V+MPS Y+RF N
Sbjct: 202 EITKVEMPSKKKYLRFVN 219
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
+ R ++II P + L+ V GR VDE LR++ + Q F + + V PANWKPGDK
Sbjct: 124 GVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ-FVEKHGEVCPANWKPGDK 182
Query: 103 VM 104
M
Sbjct: 183 TM 184
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ + R V+II P+ KL+ I+ GR+V+E++R++++LQ F + + V PANWK GD
Sbjct: 123 SGVAYRGVFIIDPNGKLRQIIINDXPIGRNVEEVIRLVEALQ-FVEEHGEVCPANWKKGD 181
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
AI +R ++I + K++ +++ GR+ DE+LR++D+L L ++ + V PA W+ GDK
Sbjct: 120 AIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL-LHFEEHGEVCPAGWRKGDK 178
Query: 103 VM 104
M
Sbjct: 179 GM 180
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
+ R ++II P L+ V GRSV+E+LR+L++ Q F + + V PANWK GD
Sbjct: 144 GVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ-FVEKHGEVCPANWKKGDP 202
Query: 103 VM 104
M
Sbjct: 203 GM 204
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
+ +R ++II P ++ + GR+VDE LR++++ Q KN TV+ P NW PG
Sbjct: 140 GVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTVL-PCNWTPG-A 197
Query: 103 VMIHPAVKDDE 113
I P V+D +
Sbjct: 198 ATIKPTVEDSK 208
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPG 100
R ++II P+ L+ + GRSVDE LR+LD+ Q F + + V P NWK G
Sbjct: 158 RGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQ-FVEKHGEVCPVNWKRG 210
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
R ++II P+ L+ + GRSVDE LR+LD+ Q F + + V P NWK G
Sbjct: 161 RGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQ-FVEKHGEVCPVNWKRGQ 214
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPG 100
R ++II P+ L+ + GRSVDE LR+LD+ Q F + + V P NWK G
Sbjct: 158 RGLFIIDPNGILRQITLNDKPVGRSVDETLRLLDAFQ-FVEKHGEVCPVNWKRG 210
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
++ +RA +I ++ +V + GRSVDEILR++D+LQ K V PANW+ G +
Sbjct: 118 SVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYGD-VCPANWQKGKE 176
Query: 103 VM 104
M
Sbjct: 177 SM 178
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
R +I+ P+ +++ S GR+VDE+LRVLD+LQ + + +NW+ GD +
Sbjct: 133 RVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ-----SDELCASNWRKGDPTL 185
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
++++RA +I + ++ +V + GRSVDEILR++D++Q K V PANW+ G K
Sbjct: 139 SVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGD-VCPANWQKG-K 196
Query: 103 VMIHPA 108
V + P+
Sbjct: 197 VSMKPS 202
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPG 100
I+ R ++II L+ + GRSVDEILR++ + Q F + V PA WKPG
Sbjct: 124 GISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQ-FTDKHGEVCPAGWKPG 180
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPG 100
I+ R ++II L+ + GRSVDEILR++ + Q F + V PA WKPG
Sbjct: 124 GISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQ-FTDKHGEVCPAGWKPG 180
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
I+ R ++II L+ V GRSVDE LR++ + Q F + V+PA WKPG
Sbjct: 124 GISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQ-FTDKHGEVSPAGWKPGSD 182
Query: 103 VMIHPAVKDDE 113
+ K E
Sbjct: 183 TICPDVQKSKE 193
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD- 101
+ +R ++II P+ +K V GRSV+E LR++ + Q F + + V+PANW P
Sbjct: 144 GLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ-FVEAHGEVSPANWTPESP 202
Query: 102 KVMIHPAVKDDELPKL 117
+ HP + K+
Sbjct: 203 TIKPHPTASREYFEKV 218
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPG 100
I+ R ++II L+ V GRSVDE LR++ + Q F + V+PA WKPG
Sbjct: 124 GISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQ-FTDKHGEVSPAGWKPG 180
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 135 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 193
Query: 102 KVMI-HPAVKDDELPKL 117
+ +I PA K KL
Sbjct: 194 ETIIPDPAGKLKYFDKL 210
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 170 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 228
Query: 102 KVMI 105
+ +I
Sbjct: 229 ETII 232
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 170 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 228
Query: 102 KVMI 105
+ +I
Sbjct: 229 ETII 232
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 178 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 236
Query: 102 KVMI 105
+ +I
Sbjct: 237 ETII 240
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 170 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 228
Query: 102 KVMI 105
+ +I
Sbjct: 229 ETII 232
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 178 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGS 236
Query: 102 KVMI 105
+ +I
Sbjct: 237 ETII 240
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 178 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVA-PAGWKPGS 236
Query: 102 KVMI 105
+ +I
Sbjct: 237 ETII 240
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
+ T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG
Sbjct: 178 SGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVA-PAGWKPGS 236
Query: 102 KVMI 105
+ +I
Sbjct: 237 ETII 240
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
T+R ++II L+ + GRSVDE LR++ + Q K+ V PA WKPG +
Sbjct: 167 TLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKHGEVC-PAGWKPGSDTI 225
Query: 105 I 105
I
Sbjct: 226 I 226
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 43 AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDK 102
I R ++II L+ V GRSVDE LR++ + Q + + V PA WKPG
Sbjct: 122 GIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ-YTDEHGEVCPAGWKPGSD 180
Query: 103 VMIHPAVKDDE 113
I P V D +
Sbjct: 181 T-IKPNVDDSK 190
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 11 GDFPFAIIGDENRDLAVXXXXXXXXXXXXXXTAITVRAVYIIGPDRKLKLSIVYPASTGR 70
G+ F ++ D N+D++ + +R ++II + ++ V GR
Sbjct: 118 GNVEFTLVSDINKDIS-------KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGR 170
Query: 71 SVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
+V E+LR +DS+ + + V P NWK G K
Sbjct: 171 NVQEVLRTIDSI-IHVDTSGEVCPINWKKGQKAF 203
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 124 TVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 182
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 183 EGLIVPPPTTEDQ 195
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 123 TVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 181
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 182 EGLIVPPPTTEDQ 194
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 124 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 182
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 183 EGLIVPPPTTEDQ 195
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 181
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 182 EGLIVPPPTTEDQ 194
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 124 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 182
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 183 EGLIVPPPTTEDQ 195
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 181
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 182 EGLIVPPPTTEDQ 194
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 181
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 182 EGLIVPPPTTEDQ 194
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKP----G 100
TVR V+I+ ++ + YP GR VDEILR++ +L+L V PA+W G
Sbjct: 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAV-PADWPNNEIIG 181
Query: 101 DKVMIHPAVKDDE 113
+ +++ P +D+
Sbjct: 182 EGLIVPPPTTEDQ 194
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V+PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEGEATL 176
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGDKVM 104
RA +++ P ++ V GR ++LR + + Q + V PA WK G+ +
Sbjct: 119 RATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATL 176
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 33.1 bits (74), Expect = 0.053, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 97 WKPGDKVMIHPAVKDDELPKLFPKGV 122
WKPGD V++HPA D++ P G+
Sbjct: 131 WKPGDHVIVHPAHVDEQEPATHGDGM 156
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 42 TAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101
T + R +II PD ++ + GR ++ + + Q +N V PA W+ G
Sbjct: 115 TGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGG 174
Query: 102 KVM 104
+ +
Sbjct: 175 ETL 177
>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|B Chain B, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|C Chain C, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|D Chain D, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|E Chain E, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
pdb|3VKU|F Chain F, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase
Length = 326
Score = 25.4 bits (54), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 92 VTPANWKPGDKVMIHPAVKDDELPKLFP----KGVDIVDMPSGVSY 133
VT A W V HP +K+D+L K+F K +I+ + Y
Sbjct: 197 VTIAEW-----VKAHPEIKEDKLVKMFEDVRNKAYEIIKLKGATFY 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.142 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,069,121
Number of Sequences: 62578
Number of extensions: 149255
Number of successful extensions: 360
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 284
Number of HSP's gapped (non-prelim): 54
length of query: 140
length of database: 14,973,337
effective HSP length: 89
effective length of query: 51
effective length of database: 9,403,895
effective search space: 479598645
effective search space used: 479598645
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)