Query psy1180
Match_columns 140
No_of_seqs 225 out of 1793
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 19:20:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1prx_A HORF6; peroxiredoxin, h 100.0 6.1E-39 2.1E-43 250.4 13.4 129 11-140 96-224 (224)
2 2v2g_A Peroxiredoxin 6; oxidor 100.0 2.4E-38 8.2E-43 249.4 12.2 127 12-140 93-219 (233)
3 1xcc_A 1-Cys peroxiredoxin; un 100.0 4.5E-37 1.6E-41 239.3 13.9 127 11-139 93-220 (220)
4 3sbc_A Peroxiredoxin TSA1; alp 100.0 5E-34 1.7E-38 223.8 8.1 101 10-120 113-213 (216)
5 3tue_A Tryparedoxin peroxidase 100.0 8.8E-33 3E-37 217.1 9.1 102 10-120 117-218 (219)
6 3a2v_A Probable peroxiredoxin; 100.0 3.9E-32 1.3E-36 216.4 8.9 118 11-140 94-217 (249)
7 3tjj_A Peroxiredoxin-4; thiore 99.9 5.1E-24 1.7E-28 169.2 8.6 100 11-120 153-252 (254)
8 3qpm_A Peroxiredoxin; oxidored 99.9 5.1E-23 1.7E-27 161.7 9.6 99 11-119 139-237 (240)
9 1zye_A Thioredoxin-dependent p 99.9 5E-22 1.7E-26 153.4 8.7 100 11-120 118-217 (220)
10 2pn8_A Peroxiredoxin-4; thiore 99.9 1.3E-21 4.6E-26 150.3 9.8 99 11-119 110-208 (211)
11 2i81_A 2-Cys peroxiredoxin; st 99.8 7.2E-21 2.5E-25 146.4 10.8 98 11-119 114-211 (213)
12 1uul_A Tryparedoxin peroxidase 99.8 5.9E-21 2E-25 144.5 9.7 100 11-120 98-197 (202)
13 1n8j_A AHPC, alkyl hydroperoxi 99.8 2.2E-20 7.7E-25 140.2 10.8 89 12-106 90-178 (186)
14 2h01_A 2-Cys peroxiredoxin; th 99.8 2.9E-20 1E-24 139.2 9.3 97 11-118 93-189 (192)
15 1qmv_A Human thioredoxin perox 99.8 4.1E-20 1.4E-24 139.1 10.0 98 11-118 96-193 (197)
16 2c0d_A Thioredoxin peroxidase 99.8 2.8E-19 9.6E-24 138.8 9.2 97 12-119 119-215 (221)
17 3ztl_A Thioredoxin peroxidase; 99.8 1.7E-18 5.7E-23 133.6 10.2 91 11-108 131-221 (222)
18 1we0_A Alkyl hydroperoxide red 99.7 1.5E-17 5.3E-22 123.6 8.8 90 12-107 91-180 (187)
19 1zof_A Alkyl hydroperoxide-red 99.7 2.4E-17 8.1E-22 123.8 8.1 99 11-120 95-193 (198)
20 2bmx_A Alkyl hydroperoxidase C 99.6 4.9E-15 1.7E-19 111.1 8.4 84 11-106 104-187 (195)
21 4gqc_A Thiol peroxidase, perox 99.6 5.7E-15 2E-19 109.0 8.0 71 11-83 88-159 (164)
22 4eo3_A Bacterioferritin comigr 99.5 5.1E-15 1.7E-19 121.0 6.6 96 11-117 75-170 (322)
23 4g2e_A Peroxiredoxin; redox pr 99.5 5.3E-14 1.8E-18 102.7 8.8 71 11-82 85-156 (157)
24 3mng_A Peroxiredoxin-5, mitoch 99.4 4.9E-13 1.7E-17 100.2 6.2 71 11-82 100-173 (173)
25 1xiy_A Peroxiredoxin, pfaop; a 99.3 7.3E-12 2.5E-16 95.0 7.3 70 11-83 101-181 (182)
26 3keb_A Probable thiol peroxida 99.2 2.2E-11 7.7E-16 95.4 8.3 72 11-85 103-177 (224)
27 3drn_A Peroxiredoxin, bacterio 99.2 1.3E-10 4.3E-15 84.1 8.8 75 11-94 84-158 (161)
28 3ixr_A Bacterioferritin comigr 99.1 8.1E-11 2.8E-15 87.2 7.4 72 11-83 106-177 (179)
29 4f82_A Thioredoxin reductase; 99.1 4.8E-11 1.6E-15 90.5 5.4 68 11-82 104-174 (176)
30 3gkn_A Bacterioferritin comigr 99.1 2E-10 6.9E-15 82.6 6.6 72 11-83 90-161 (163)
31 2xhf_A Peroxiredoxin 5; oxidor 99.1 7.9E-11 2.7E-15 88.7 4.2 65 14-80 103-170 (171)
32 3p7x_A Probable thiol peroxida 99.0 5.4E-10 1.8E-14 81.3 7.3 66 11-82 98-166 (166)
33 1psq_A Probable thiol peroxida 99.0 2.1E-09 7.1E-14 77.9 7.8 66 11-82 95-163 (163)
34 1xvw_A Hypothetical protein RV 98.9 2E-09 6.7E-14 77.0 7.1 67 11-83 91-159 (160)
35 2ywi_A Hypothetical conserved 98.9 2.5E-09 8.6E-14 78.8 7.8 79 11-101 108-196 (196)
36 3uma_A Hypothetical peroxiredo 98.9 1.1E-09 3.6E-14 82.6 5.6 65 11-78 113-183 (184)
37 2cvb_A Probable thiol-disulfid 98.9 1.9E-09 6.6E-14 79.2 6.7 80 11-102 94-182 (188)
38 3u5r_E Uncharacterized protein 98.9 3.3E-09 1.1E-13 80.9 7.7 80 11-102 121-210 (218)
39 2pwj_A Mitochondrial peroxired 98.9 1.6E-09 5.4E-14 80.1 5.7 68 13-82 104-171 (171)
40 3zrd_A Thiol peroxidase; oxido 98.9 4.5E-09 1.6E-13 79.5 7.8 67 11-80 131-200 (200)
41 1tp9_A Peroxiredoxin, PRX D (t 98.9 2.7E-09 9.3E-14 77.6 5.5 64 11-78 92-161 (162)
42 1nm3_A Protein HI0572; hybrid, 98.9 3.3E-09 1.1E-13 81.6 6.2 70 11-83 90-166 (241)
43 1q98_A Thiol peroxidase, TPX; 98.8 5.4E-09 1.9E-13 75.9 6.8 66 11-79 96-164 (165)
44 2yzh_A Probable thiol peroxida 98.7 1.8E-08 6.3E-13 73.2 6.9 68 11-82 100-170 (171)
45 2jsy_A Probable thiol peroxida 98.7 4.6E-08 1.6E-12 70.4 8.5 67 11-83 97-166 (167)
46 2wfc_A Peroxiredoxin 5, PRDX5; 98.7 3.8E-08 1.3E-12 72.5 6.3 70 11-82 88-159 (167)
47 1xvq_A Thiol peroxidase; thior 98.6 9.8E-08 3.3E-12 69.9 8.1 68 11-81 96-165 (175)
48 2a4v_A Peroxiredoxin DOT5; yea 98.5 6.9E-08 2.4E-12 69.2 4.5 65 11-82 89-156 (159)
49 4evm_A Thioredoxin family prot 98.3 1.8E-06 6E-11 58.4 7.3 56 11-82 81-137 (138)
50 2b7k_A SCO1 protein; metalloch 98.3 4.4E-07 1.5E-11 68.0 4.6 85 11-98 103-195 (200)
51 3eyt_A Uncharacterized protein 98.3 2.1E-06 7.1E-11 60.6 7.7 57 11-83 90-151 (158)
52 3lor_A Thiol-disulfide isomera 98.3 2.6E-06 8.9E-11 60.1 7.6 56 11-82 92-153 (160)
53 3kcm_A Thioredoxin family prot 98.3 2.4E-06 8.1E-11 59.9 6.9 63 11-87 84-146 (154)
54 2f9s_A Thiol-disulfide oxidore 98.2 3.1E-06 1E-10 59.4 7.3 57 11-83 81-137 (151)
55 3hdc_A Thioredoxin family prot 98.2 4.5E-06 1.5E-10 59.3 8.1 60 11-84 93-152 (158)
56 3gl3_A Putative thiol:disulfid 98.2 5.2E-06 1.8E-10 58.0 8.1 60 11-84 83-142 (152)
57 2b5x_A YKUV protein, TRXY; thi 98.2 4.9E-06 1.7E-10 57.4 7.7 56 11-82 88-143 (148)
58 3fw2_A Thiol-disulfide oxidore 98.2 4E-06 1.4E-10 59.0 6.4 53 11-82 91-146 (150)
59 1lu4_A Soluble secreted antige 98.2 5.1E-06 1.7E-10 56.6 6.7 58 11-82 77-134 (136)
60 3erw_A Sporulation thiol-disul 98.1 5.9E-06 2E-10 56.8 6.6 53 11-79 92-144 (145)
61 3kh7_A Thiol:disulfide interch 98.1 4E-06 1.4E-10 61.3 5.9 44 11-66 109-153 (176)
62 1jfu_A Thiol:disulfide interch 98.1 5.5E-06 1.9E-10 60.2 6.3 63 11-83 116-179 (186)
63 1xzo_A BSSCO, hypothetical pro 98.1 6.1E-06 2.1E-10 59.0 6.3 70 11-83 94-171 (174)
64 2l5o_A Putative thioredoxin; s 98.1 8.1E-06 2.8E-10 57.1 6.7 57 11-83 84-140 (153)
65 3lwa_A Secreted thiol-disulfid 98.1 6.5E-06 2.2E-10 59.8 6.2 59 11-82 121-179 (183)
66 3raz_A Thioredoxin-related pro 98.1 5.9E-06 2E-10 58.2 5.5 63 11-87 78-143 (151)
67 3ewl_A Uncharacterized conserv 98.0 1.3E-05 4.6E-10 55.4 6.8 54 11-83 85-140 (142)
68 1zzo_A RV1677; thioredoxin fol 98.0 2.3E-05 8E-10 53.0 7.9 55 11-82 78-133 (136)
69 2ggt_A SCO1 protein homolog, m 98.0 1.1E-05 3.7E-10 57.1 6.2 70 11-84 86-161 (164)
70 2hyx_A Protein DIPZ; thioredox 98.0 1.9E-05 6.6E-10 65.0 8.0 72 11-99 142-213 (352)
71 3fkf_A Thiol-disulfide oxidore 98.0 1.6E-05 5.4E-10 54.9 6.4 53 11-82 89-144 (148)
72 2h30_A Thioredoxin, peptide me 98.0 2.5E-05 8.5E-10 55.1 7.4 55 12-82 99-154 (164)
73 2rli_A SCO2 protein homolog, m 98.0 3.8E-05 1.3E-09 54.7 8.2 73 11-87 89-167 (171)
74 2lrn_A Thiol:disulfide interch 97.9 1.4E-05 4.9E-10 56.2 5.8 54 11-83 84-140 (152)
75 3hcz_A Possible thiol-disulfid 97.9 1.7E-05 5.7E-10 54.7 6.0 55 11-81 86-143 (148)
76 3ia1_A THIO-disulfide isomeras 97.9 8.4E-06 2.9E-10 57.2 4.4 57 11-83 84-143 (154)
77 1kng_A Thiol:disulfide interch 97.9 3E-05 1E-09 54.1 6.9 56 11-82 94-150 (156)
78 2k6v_A Putative cytochrome C o 97.9 9.2E-06 3.2E-10 57.8 3.8 68 11-82 97-171 (172)
79 2b1k_A Thiol:disulfide interch 97.9 1.7E-05 5.7E-10 56.6 5.0 43 11-65 102-145 (168)
80 2lrt_A Uncharacterized protein 97.8 2.5E-05 8.7E-10 55.4 5.5 53 11-79 88-143 (152)
81 2ls5_A Uncharacterized protein 97.0 2.7E-06 9.4E-11 60.3 0.0 60 11-85 90-149 (159)
82 3ha9_A Uncharacterized thiored 97.7 5.7E-05 1.9E-09 53.6 6.1 55 11-83 108-163 (165)
83 3or5_A Thiol:disulfide interch 97.7 8.7E-05 3E-09 52.2 6.6 61 11-82 89-149 (165)
84 3me7_A Putative uncharacterize 97.6 9.8E-05 3.4E-09 53.6 5.5 59 21-85 105-163 (170)
85 4h86_A Peroxiredoxin type-2; o 97.6 8.7E-05 3E-09 57.2 5.3 63 11-77 131-197 (199)
86 2lja_A Putative thiol-disulfid 97.5 9.3E-05 3.2E-09 51.5 4.7 55 15-85 90-144 (152)
87 4fo5_A Thioredoxin-like protei 97.5 5.8E-05 2E-09 52.5 3.4 51 11-80 87-141 (143)
88 3eur_A Uncharacterized protein 97.4 0.00035 1.2E-08 48.3 6.1 51 11-80 89-141 (142)
89 3cmi_A Peroxiredoxin HYR1; thi 97.4 2.9E-05 1E-09 55.9 0.5 68 11-82 94-166 (171)
90 3dwv_A Glutathione peroxidase- 97.1 0.00031 1.1E-08 51.5 3.5 67 11-82 109-181 (187)
91 2p5q_A Glutathione peroxidase 97.0 0.00027 9.4E-09 49.9 2.5 58 11-82 95-166 (170)
92 2vup_A Glutathione peroxidase- 97.0 0.00031 1.1E-08 51.5 2.6 31 48-82 153-183 (190)
93 2v1m_A Glutathione peroxidase; 96.9 0.00058 2E-08 48.2 3.4 68 11-82 94-165 (169)
94 2i3y_A Epididymal secretory gl 96.9 0.00037 1.3E-08 53.3 2.1 33 47-83 178-210 (215)
95 2r37_A Glutathione peroxidase 96.9 0.00046 1.6E-08 52.3 2.5 32 47-82 160-191 (207)
96 2gs3_A PHGPX, GPX-4, phospholi 96.9 0.00037 1.3E-08 50.9 1.9 67 11-81 111-183 (185)
97 2obi_A PHGPX, GPX-4, phospholi 96.9 0.00035 1.2E-08 50.8 1.7 68 11-82 109-182 (183)
98 2lus_A Thioredoxion; CR-Trp16, 95.8 0.00023 8E-09 48.8 0.0 48 15-74 90-137 (143)
99 2p31_A CL683, glutathione pero 96.6 0.00036 1.2E-08 50.8 0.1 31 48-82 149-179 (181)
100 2f8a_A Glutathione peroxidase 96.6 0.0033 1.1E-07 47.3 5.4 32 47-82 174-205 (208)
101 1o8x_A Tryparedoxin, TRYX, TXN 96.5 0.00063 2.1E-08 47.2 0.7 56 13-99 87-144 (146)
102 2ju5_A Thioredoxin disulfide i 96.2 0.0081 2.8E-07 42.6 5.6 49 20-83 103-151 (154)
103 4hde_A SCO1/SENC family lipopr 96.2 0.034 1.2E-06 40.1 9.0 36 46-83 134-169 (170)
104 2kuc_A Putative disulphide-iso 96.1 0.016 5.4E-07 39.0 6.5 47 21-83 74-120 (130)
105 2l57_A Uncharacterized protein 96.0 0.015 5.2E-07 39.1 5.7 56 12-83 58-116 (126)
106 1o73_A Tryparedoxin; electron 95.7 0.0025 8.7E-08 43.7 0.9 36 14-61 88-125 (144)
107 3fk8_A Disulphide isomerase; A 95.4 0.034 1.2E-06 37.6 5.8 55 20-83 75-132 (133)
108 3kij_A Probable glutathione pe 95.3 0.026 9E-07 40.6 5.1 36 49-84 139-174 (180)
109 2fwh_A Thiol:disulfide interch 95.2 0.0071 2.4E-07 41.6 1.8 48 20-83 78-127 (134)
110 1i5g_A Tryparedoxin II; electr 95.2 0.0045 1.5E-07 42.6 0.6 37 14-62 88-126 (144)
111 3hxs_A Thioredoxin, TRXP; elec 93.7 0.17 5.7E-06 34.3 6.1 49 17-82 89-137 (141)
112 2l5l_A Thioredoxin; structural 93.5 0.18 6.1E-06 34.4 5.9 53 13-82 71-124 (136)
113 3s9f_A Tryparedoxin; thioredox 93.5 0.017 5.9E-07 41.2 0.6 37 14-62 108-146 (165)
114 2voc_A Thioredoxin; electron t 93.3 0.19 6.4E-06 32.9 5.5 53 13-82 50-103 (112)
115 2i4a_A Thioredoxin; acidophIle 93.1 0.23 7.8E-06 31.6 5.6 53 13-82 53-106 (107)
116 2trx_A Thioredoxin; electron t 92.9 0.28 9.4E-06 31.4 5.8 53 13-82 53-106 (108)
117 1thx_A Thioredoxin, thioredoxi 92.9 0.28 9.5E-06 31.6 5.9 53 13-82 58-111 (115)
118 2e0q_A Thioredoxin; electron t 92.2 0.42 1.4E-05 29.9 6.0 53 13-82 48-101 (104)
119 3tco_A Thioredoxin (TRXA-1); d 92.2 0.4 1.4E-05 30.4 5.9 53 13-82 54-107 (109)
120 1nsw_A Thioredoxin, TRX; therm 92.2 0.22 7.5E-06 31.7 4.6 52 13-81 50-102 (105)
121 1w4v_A Thioredoxin, mitochondr 92.2 0.37 1.3E-05 31.9 5.9 53 13-82 64-117 (119)
122 1dby_A Chloroplast thioredoxin 92.1 0.53 1.8E-05 29.9 6.4 53 13-82 52-105 (107)
123 3f9u_A Putative exported cytoc 92.0 0.058 2E-06 38.2 1.7 42 26-82 123-164 (172)
124 2pu9_C TRX-F, thioredoxin F-ty 91.8 0.42 1.4E-05 30.9 5.7 44 21-82 66-109 (111)
125 2yzu_A Thioredoxin; redox prot 91.7 0.44 1.5E-05 30.1 5.6 53 13-82 51-104 (109)
126 2es7_A Q8ZP25_salty, putative 90.9 0.21 7.3E-06 35.2 3.7 48 19-83 77-124 (142)
127 3die_A Thioredoxin, TRX; elect 90.9 0.61 2.1E-05 29.4 5.7 52 13-81 52-104 (106)
128 1oaz_A Thioredoxin 1; immune s 90.3 0.28 9.6E-06 33.1 3.7 47 19-82 75-121 (123)
129 3ira_A Conserved protein; meth 90.2 0.43 1.5E-05 35.2 5.0 50 20-81 83-144 (173)
130 1t00_A Thioredoxin, TRX; redox 90.0 0.67 2.3E-05 29.8 5.4 53 13-82 56-109 (112)
131 2o8v_B Thioredoxin 1; disulfid 90.0 0.37 1.3E-05 32.7 4.1 46 20-82 81-126 (128)
132 3zzx_A Thioredoxin; oxidoreduc 89.8 0.79 2.7E-05 30.3 5.6 45 19-81 59-103 (105)
133 3hz4_A Thioredoxin; NYSGXRC, P 89.7 0.57 1.9E-05 32.0 5.0 74 13-103 57-132 (140)
134 1fb6_A Thioredoxin M; electron 89.6 1.2 4.2E-05 27.9 6.3 47 19-82 58-104 (105)
135 2l6c_A Thioredoxin; oxidoreduc 89.1 0.86 2.9E-05 29.6 5.4 54 12-82 50-104 (110)
136 2wz9_A Glutaredoxin-3; protein 89.0 0.99 3.4E-05 31.3 5.9 54 12-83 63-117 (153)
137 1x5d_A Protein disulfide-isome 88.8 0.99 3.4E-05 29.8 5.6 47 20-83 70-116 (133)
138 3gnj_A Thioredoxin domain prot 88.7 1.3 4.4E-05 28.2 6.0 53 13-82 55-108 (111)
139 4euy_A Uncharacterized protein 88.5 0.84 2.9E-05 29.2 5.0 47 19-82 57-103 (105)
140 1faa_A Thioredoxin F; electron 88.3 0.83 2.8E-05 30.0 4.9 44 21-82 79-122 (124)
141 3f3q_A Thioredoxin-1; His TAG, 87.9 1.7 5.7E-05 28.1 6.2 52 13-82 56-108 (109)
142 3ul3_B Thioredoxin, thioredoxi 87.8 0.72 2.5E-05 30.8 4.4 45 19-80 82-126 (128)
143 2ppt_A Thioredoxin-2; thiredox 87.5 1.5 5E-05 30.7 6.1 53 13-82 97-150 (155)
144 3cxg_A Putative thioredoxin; m 87.4 1.2 4.1E-05 30.2 5.4 47 19-82 78-127 (133)
145 2dml_A Protein disulfide-isome 87.4 0.72 2.5E-05 30.5 4.2 48 19-82 75-122 (130)
146 1xfl_A Thioredoxin H1; AT3G510 87.1 1.5 5.3E-05 29.2 5.8 45 20-82 78-122 (124)
147 3d22_A TRXH4, thioredoxin H-ty 86.9 1.4 4.9E-05 29.5 5.5 52 13-82 78-130 (139)
148 2dlx_A UBX domain-containing p 86.8 1.4 4.7E-05 31.6 5.6 45 22-83 90-135 (153)
149 3qfa_C Thioredoxin; protein-pr 86.7 2.3 7.8E-05 27.9 6.4 46 19-82 70-115 (116)
150 1v98_A Thioredoxin; oxidoreduc 86.5 2.1 7.3E-05 28.8 6.3 53 13-82 83-136 (140)
151 3p2a_A Thioredoxin 2, putative 86.3 1.5 5E-05 29.9 5.4 54 12-82 87-141 (148)
152 3gix_A Thioredoxin-like protei 85.9 1.6 5.5E-05 30.4 5.5 56 19-87 63-124 (149)
153 1ep7_A Thioredoxin CH1, H-type 85.4 2.3 7.8E-05 27.0 5.7 52 13-82 57-109 (112)
154 3uvt_A Thioredoxin domain-cont 85.4 2 6.8E-05 27.2 5.4 53 12-81 56-109 (111)
155 2xc2_A Thioredoxinn; oxidoredu 85.4 2.4 8.1E-05 27.5 5.9 45 20-82 72-116 (117)
156 2vlu_A Thioredoxin, thioredoxi 85.4 2.2 7.6E-05 27.7 5.8 52 13-82 66-118 (122)
157 2oe3_A Thioredoxin-3; electron 84.9 2 6.9E-05 28.2 5.4 51 13-81 62-113 (114)
158 2vm1_A Thioredoxin, thioredoxi 84.8 2.8 9.4E-05 26.8 6.0 52 13-82 60-112 (118)
159 2lst_A Thioredoxin; structural 84.9 0.19 6.4E-06 33.6 0.0 46 21-82 66-114 (130)
160 2vim_A Thioredoxin, TRX; thior 84.5 3 0.0001 25.9 5.9 53 12-82 50-103 (104)
161 3emx_A Thioredoxin; structural 84.4 0.99 3.4E-05 30.6 3.7 47 20-83 79-125 (135)
162 1r26_A Thioredoxin; redox-acti 83.2 3.2 0.00011 27.8 5.9 52 13-82 69-121 (125)
163 1gh2_A Thioredoxin-like protei 82.9 3.7 0.00013 26.0 5.9 52 13-82 53-105 (107)
164 1xwb_A Thioredoxin; dimerizati 82.7 3.6 0.00012 25.6 5.7 45 19-81 60-104 (106)
165 3m9j_A Thioredoxin; oxidoreduc 82.6 3.7 0.00013 25.6 5.8 46 19-82 59-104 (105)
166 2j23_A Thioredoxin; immune pro 82.5 3.2 0.00011 27.3 5.6 52 13-82 67-119 (121)
167 1ti3_A Thioredoxin H, PTTRXH1; 82.2 2 6.7E-05 27.3 4.3 52 13-82 58-110 (113)
168 2i1u_A Thioredoxin, TRX, MPT46 81.8 1.7 5.9E-05 28.0 4.0 53 12-81 62-115 (121)
169 3h79_A Thioredoxin-like protei 81.5 1.9 6.3E-05 28.6 4.1 55 13-82 71-126 (127)
170 1x5e_A Thioredoxin domain cont 81.4 2 6.9E-05 28.2 4.3 54 12-83 55-109 (126)
171 3d6i_A Monothiol glutaredoxin- 81.1 3.7 0.00013 26.1 5.4 53 12-82 54-107 (112)
172 2f51_A Thioredoxin; electron t 81.1 2 6.9E-05 28.3 4.2 57 12-85 54-114 (118)
173 2qsi_A Putative hydrogenase ex 80.7 3.1 0.00011 29.6 5.2 48 19-83 75-122 (137)
174 2qgv_A Hydrogenase-1 operon pr 80.4 2.4 8.2E-05 30.3 4.6 47 19-82 77-123 (140)
175 2dj1_A Protein disulfide-isome 80.1 2.8 9.6E-05 27.9 4.7 46 20-83 78-123 (140)
176 2yj7_A LPBCA thioredoxin; oxid 80.6 0.38 1.3E-05 30.2 0.0 45 20-81 60-104 (106)
177 1syr_A Thioredoxin; SGPP, stru 78.2 4 0.00014 26.2 4.9 52 13-82 58-110 (112)
178 3apq_A DNAJ homolog subfamily 78.0 2.8 9.7E-05 30.4 4.5 53 13-82 147-200 (210)
179 1nho_A Probable thioredoxin; b 76.7 3.5 0.00012 24.7 4.0 42 20-82 42-83 (85)
180 3aps_A DNAJ homolog subfamily 75.8 1.5 5.1E-05 28.6 2.2 59 12-83 53-112 (122)
181 1mek_A Protein disulfide isome 74.9 1.6 5.6E-05 27.8 2.2 46 20-82 68-115 (120)
182 4fu0_A D-alanine--D-alanine li 74.5 8.4 0.00029 30.6 6.7 43 46-88 296-352 (357)
183 1sen_A Thioredoxin-like protei 74.1 1.7 6E-05 30.6 2.3 39 46-84 104-148 (164)
184 1a8l_A Protein disulfide oxido 73.0 7.7 0.00026 27.9 5.7 54 12-82 170-224 (226)
185 3q6o_A Sulfhydryl oxidase 1; p 72.9 5.6 0.00019 29.4 5.1 40 11-62 183-222 (244)
186 3ph9_A Anterior gradient prote 72.1 1.3 4.3E-05 31.7 1.2 36 46-81 101-142 (151)
187 3dxb_A Thioredoxin N-terminall 71.1 5.3 0.00018 29.3 4.5 48 19-83 70-117 (222)
188 3qou_A Protein YBBN; thioredox 71.0 7.9 0.00027 29.1 5.5 51 13-80 59-110 (287)
189 1zma_A Bacterocin transport ac 70.7 3.1 0.00011 27.0 2.8 41 23-80 77-117 (118)
190 2k9k_A TONB2; metal transport; 68.8 6.7 0.00023 25.8 4.2 36 46-81 42-78 (106)
191 1qgv_A Spliceosomal protein U5 67.4 9.7 0.00033 26.0 5.0 52 20-84 64-121 (142)
192 1u07_A TONB protein; beta-hair 65.9 6.7 0.00023 25.0 3.6 20 46-65 27-46 (90)
193 3t58_A Sulfhydryl oxidase 1; o 62.5 22 0.00076 30.1 7.2 55 12-82 65-125 (519)
194 1fo5_A Thioredoxin; disulfide 61.8 5.7 0.0002 23.7 2.6 41 20-81 43-83 (85)
195 2jnz_A PHL P 3 allergen; timot 59.0 3.7 0.00013 28.3 1.4 12 91-102 92-103 (108)
196 3q6o_A Sulfhydryl oxidase 1; p 58.7 25 0.00084 25.8 6.1 57 12-82 65-125 (244)
197 3ft1_A PHL P 3 allergen; beta- 57.9 4 0.00014 27.6 1.4 12 91-102 81-92 (100)
198 2grx_C Protein TONB; beta barr 57.3 8.7 0.0003 29.7 3.4 36 46-81 166-202 (229)
199 3o2g_A Gamma-butyrobetaine dio 57.3 23 0.00079 28.7 6.2 62 46-107 275-343 (388)
200 1w63_Q Adapter-related protein 57.2 21 0.00073 25.3 5.4 22 46-67 2-23 (158)
201 3ga4_A Dolichyl-diphosphooligo 55.5 19 0.00065 26.4 4.9 74 12-99 81-166 (178)
202 1lr0_A TOLA protein; domain-sw 53.6 24 0.00081 24.4 4.9 36 45-80 53-89 (129)
203 1bmw_A PHL P II, pollen allerg 52.8 4.4 0.00015 27.1 0.9 12 91-102 80-91 (96)
204 2dj3_A Protein disulfide-isome 52.7 4 0.00014 26.8 0.7 35 46-82 82-116 (133)
205 1v58_A Thiol:disulfide interch 52.0 11 0.00036 28.4 3.1 45 22-83 188-232 (241)
206 2hls_A Protein disulfide oxido 49.9 32 0.0011 25.6 5.5 51 12-83 174-225 (243)
207 1ilo_A Conserved hypothetical 49.9 17 0.00057 21.2 3.2 38 22-79 39-76 (77)
208 1wmj_A Thioredoxin H-type; str 49.2 2.8 9.7E-05 27.3 -0.5 45 20-82 76-120 (130)
209 3idv_A Protein disulfide-isome 46.9 32 0.0011 24.6 5.0 52 13-82 68-120 (241)
210 3t58_A Sulfhydryl oxidase 1; o 46.3 18 0.0006 30.8 3.9 39 11-61 183-221 (519)
211 1sji_A Calsequestrin 2, calseq 45.6 24 0.00081 27.6 4.3 52 12-81 67-119 (350)
212 3kp8_A Vkorc1/thioredoxin doma 43.8 49 0.0017 21.3 5.1 37 21-79 54-90 (106)
213 3kol_A Oxidoreductase, glyoxal 43.3 25 0.00084 23.0 3.6 20 47-66 134-153 (156)
214 3u3g_D Ribonuclease H, RNAse H 43.3 29 0.00098 23.0 4.0 42 48-89 22-64 (140)
215 3a0s_A Sensor protein; PAS-fol 43.1 15 0.00052 20.6 2.2 14 48-61 4-17 (96)
216 2vgl_S AP-2 complex subunit si 43.0 36 0.0012 23.5 4.5 20 46-65 2-21 (142)
217 3b33_A Sensor protein; structu 42.5 19 0.00066 21.9 2.8 15 47-61 18-32 (115)
218 4hi4_A Aerotaxis transducer AE 41.8 15 0.00053 23.3 2.3 15 47-61 16-30 (121)
219 3k3p_A D-alanine--D-alanine li 41.5 1E+02 0.0035 24.7 7.7 34 46-79 320-367 (383)
220 3f8u_A Protein disulfide-isome 40.5 30 0.001 28.1 4.3 53 13-82 54-107 (481)
221 1ttz_A Conserved hypothetical 39.1 44 0.0015 21.0 4.2 46 19-86 34-79 (87)
222 4gym_A Glyoxalase/bleomycin re 38.6 34 0.0012 22.6 3.8 19 46-64 115-133 (149)
223 3idv_A Protein disulfide-isome 38.2 44 0.0015 23.8 4.5 52 13-82 183-235 (241)
224 3dml_A Putative uncharacterize 37.4 28 0.00094 23.7 3.1 32 46-82 77-108 (116)
225 3vhj_A BFPC; type IV pilus bio 37.3 76 0.0026 23.4 5.6 53 48-105 97-150 (172)
226 3cwf_A Alkaline phosphatase sy 37.1 17 0.0006 23.8 2.0 15 48-62 50-64 (122)
227 3fcd_A Lyase, ORF125EGC139; la 36.7 49 0.0017 21.5 4.3 21 46-66 106-126 (134)
228 3olo_A Two-component sensor hi 36.4 27 0.00093 20.9 2.7 15 47-61 24-38 (118)
229 3fg8_A Uncharacterized protein 36.4 27 0.00091 21.9 2.8 15 47-61 23-37 (118)
230 2r2j_A Thioredoxin domain-cont 36.4 51 0.0017 26.0 5.0 54 13-82 61-115 (382)
231 3tqt_A D-alanine--D-alanine li 36.4 1.4E+02 0.0048 23.8 7.7 21 46-66 300-320 (372)
232 2av4_A Thioredoxin-like protei 35.5 95 0.0032 22.5 5.9 64 20-96 82-153 (160)
233 2a4x_A Mitomycin-binding prote 35.3 47 0.0016 21.5 4.0 20 46-65 110-129 (138)
234 2gj3_A Nitrogen fixation regul 33.5 32 0.0011 21.3 2.8 14 48-61 17-30 (120)
235 2ywm_A Glutaredoxin-like prote 33.4 61 0.0021 23.1 4.6 44 19-82 175-218 (229)
236 2qnt_A AGR_C_3434P, uncharacte 32.9 45 0.0015 21.5 3.6 20 46-65 109-128 (141)
237 3e5n_A D-alanine-D-alanine lig 32.9 1.7E+02 0.0059 23.3 7.7 21 46-66 318-338 (386)
238 3fc7_A HTR-like protein, senso 32.5 27 0.00091 21.2 2.2 15 47-61 30-44 (125)
239 1ll8_A PAS kinase; PAS domain, 32.4 27 0.00093 21.3 2.3 15 47-61 9-24 (114)
240 3ey7_A Biphenyl-2,3-DIOL 1,2-d 32.1 53 0.0018 20.6 3.8 20 46-65 112-131 (133)
241 3ihg_A RDME; flavoenzyme, anth 31.9 30 0.001 28.6 3.0 19 46-64 498-516 (535)
242 2vv6_A FIXL, sensor protein FI 31.5 28 0.00095 21.5 2.2 14 48-61 5-18 (119)
243 3p8d_A Medulloblastoma antigen 31.4 20 0.0007 22.4 1.5 14 93-106 3-16 (67)
244 1z6n_A Hypothetical protein PA 31.2 23 0.00077 25.2 1.9 41 13-62 86-127 (167)
245 1ecs_A Bleomycin resistance pr 31.2 51 0.0017 21.0 3.6 19 47-65 102-120 (126)
246 3mfx_A Sensory BOX/ggdef famil 31.1 27 0.00093 23.1 2.2 15 47-61 18-32 (129)
247 2r78_A Sensor protein; sensory 31.1 36 0.0012 21.2 2.7 15 47-61 22-36 (117)
248 2ywm_A Glutaredoxin-like prote 30.6 64 0.0022 23.0 4.3 54 12-82 59-113 (229)
249 3rri_A Glyoxalase/bleomycin re 30.2 59 0.002 20.8 3.8 20 46-65 110-129 (135)
250 2qkp_A Uncharacterized protein 30.1 28 0.00097 24.0 2.2 18 47-64 30-47 (151)
251 4eg0_A D-alanine--D-alanine li 29.9 1.5E+02 0.0051 22.5 6.6 21 46-66 263-283 (317)
252 2dj0_A Thioredoxin-related tra 29.4 1E+02 0.0034 20.0 4.9 40 20-66 68-107 (137)
253 2ldm_A Uncharacterized protein 35.0 12 0.0004 24.4 0.0 14 93-106 3-16 (81)
254 3ed3_A Protein disulfide-isome 28.6 91 0.0031 23.9 5.2 49 21-82 79-140 (298)
255 3fdr_A Tudor and KH domain-con 28.6 59 0.002 20.7 3.5 32 74-106 6-37 (94)
256 3bwl_A Sensor protein; structu 28.2 45 0.0015 20.4 2.8 14 48-61 29-42 (126)
257 3sk2_A EHPR; antibiotic resist 27.9 61 0.0021 20.8 3.5 17 47-63 114-130 (132)
258 2djj_A PDI, protein disulfide- 27.7 23 0.0008 22.4 1.4 33 46-82 82-115 (121)
259 3mxq_A Sensor protein; PSI2, M 27.6 33 0.0011 23.8 2.2 15 47-61 33-47 (152)
260 3zw5_A Glyoxalase domain-conta 27.5 62 0.0021 21.3 3.6 18 46-63 129-146 (147)
261 2b5e_A Protein disulfide-isome 27.4 53 0.0018 26.8 3.7 53 13-82 65-120 (504)
262 3bqx_A Glyoxalase-related enzy 27.1 62 0.0021 21.4 3.5 19 47-65 109-127 (150)
263 3kzq_A Putative uncharacterize 27.0 61 0.0021 23.1 3.7 31 49-83 172-202 (208)
264 3iv4_A Putative oxidoreductase 27.0 54 0.0018 22.3 3.1 30 24-65 71-100 (112)
265 2rk0_A Glyoxalase/bleomycin re 26.9 88 0.003 20.0 4.2 19 47-65 110-128 (136)
266 1d06_A Nitrogen fixation regul 26.4 38 0.0013 21.2 2.2 15 47-61 27-41 (130)
267 2k8s_A Thioredoxin; dimer, str 25.4 1.1E+02 0.0036 18.0 4.1 25 22-61 44-68 (80)
268 2dbc_A PDCL2, unnamed protein 24.9 92 0.0032 20.5 4.1 36 46-82 81-119 (135)
269 3us3_A Calsequestrin-1; calciu 24.6 73 0.0025 25.1 4.0 52 13-82 70-122 (367)
270 3luq_A Sensor protein; PAS, hi 24.6 46 0.0016 19.4 2.3 15 47-61 14-28 (114)
271 3apo_A DNAJ homolog subfamily 24.5 28 0.00097 30.2 1.6 58 12-82 707-765 (780)
272 2p25_A Glyoxalase family prote 24.4 69 0.0023 19.8 3.2 15 47-61 110-124 (126)
273 3huh_A Virulence protein STM31 24.3 78 0.0027 20.7 3.6 20 46-65 125-144 (152)
274 3r4q_A Lactoylglutathione lyas 24.1 77 0.0026 21.3 3.6 20 46-65 114-133 (160)
275 1nwz_A PYP, photoactive yellow 23.9 64 0.0022 22.2 3.1 35 22-61 8-42 (125)
276 3mjq_A Uncharacterized protein 23.7 48 0.0016 19.9 2.2 15 47-61 10-24 (126)
277 3vol_A Aerotaxis transducer AE 23.5 42 0.0014 24.5 2.2 15 47-61 33-47 (233)
278 3rhe_A NAD-dependent benzaldeh 23.4 78 0.0027 21.1 3.5 19 47-65 106-124 (148)
279 2rbb_A Glyoxalase/bleomycin re 23.4 79 0.0027 20.4 3.5 19 46-64 114-132 (141)
280 3lyx_A Sensory BOX/ggdef domai 23.3 51 0.0018 19.0 2.3 15 47-61 18-32 (124)
281 2fho_A Spliceosomal protein SF 23.2 39 0.0013 19.8 1.6 34 96-130 10-43 (47)
282 3e5d_A Putative glyoxalase I; 23.1 69 0.0024 19.9 3.0 16 46-61 110-125 (127)
283 2znm_A Thiol:disulfide interch 23.0 71 0.0024 22.2 3.3 27 47-82 152-178 (195)
284 4dvc_A Thiol:disulfide interch 22.7 1.2E+02 0.0041 20.4 4.4 28 49-82 153-180 (184)
285 1qto_A Bleomycin-binding prote 22.6 75 0.0026 20.1 3.2 16 47-62 104-119 (122)
286 1xrk_A Bleomycin resistance pr 22.4 77 0.0026 20.1 3.2 16 47-62 104-119 (124)
287 3bj5_A Protein disulfide-isome 22.3 61 0.0021 22.3 2.8 77 11-100 63-146 (147)
288 2i87_A D-alanine-D-alanine lig 22.3 2.2E+02 0.0074 22.1 6.4 21 46-66 290-310 (364)
289 2rih_A Conserved protein with 22.2 62 0.0021 21.1 2.7 54 17-88 82-135 (141)
290 1r9c_A Glutathione transferase 22.1 70 0.0024 20.7 3.0 19 46-64 104-122 (139)
291 1f9z_A Glyoxalase I; beta-alph 21.9 89 0.003 19.6 3.4 18 47-64 109-126 (135)
292 3apo_A DNAJ homolog subfamily 21.9 1.1E+02 0.0038 26.5 4.9 53 12-82 487-540 (780)
293 3l7t_A SMU.1112C, putative unc 21.7 83 0.0028 19.5 3.2 16 46-61 117-132 (134)
294 3g12_A Putative lactoylglutath 21.5 73 0.0025 20.6 3.0 19 47-66 104-122 (128)
295 1xqa_A Glyoxalase/bleomycin re 21.5 58 0.002 20.0 2.4 16 46-61 96-111 (113)
296 3f8u_A Protein disulfide-isome 21.4 53 0.0018 26.5 2.6 55 13-82 405-459 (481)
297 4h3u_A Hypothetical protein; s 21.4 1.5E+02 0.0051 19.9 4.7 36 48-101 122-157 (158)
298 4g6x_A Glyoxalase/bleomycin re 21.4 76 0.0026 21.1 3.1 16 47-62 134-149 (155)
299 3t12_B Gliding protein MGLB; G 21.3 87 0.003 21.9 3.4 19 46-64 26-44 (136)
300 2diq_A Tudor and KH domain-con 21.2 1.2E+02 0.0041 19.7 4.0 33 73-106 10-42 (110)
301 2vlg_A Sporulation kinase A; h 21.0 70 0.0024 20.5 2.7 15 47-61 10-24 (111)
302 3ghj_A Putative integron gene 20.9 92 0.0032 20.4 3.4 17 46-62 123-139 (141)
303 2qqz_A Glyoxalase family prote 20.8 1.1E+02 0.0038 19.1 3.7 18 46-63 106-123 (126)
304 2pjs_A AGR_C_3564P, uncharacte 20.8 88 0.003 19.3 3.2 17 46-62 100-116 (119)
305 3hst_B Protein RV2228C/MT2287; 20.6 92 0.0031 20.5 3.4 42 48-89 22-65 (141)
306 3r6a_A Uncharacterized protein 20.4 97 0.0033 20.7 3.5 18 47-64 101-118 (144)
307 1e4e_A Vancomycin/teicoplanin 20.3 2E+02 0.007 22.0 5.8 21 46-66 289-309 (343)
308 3itw_A Protein TIOX; bleomycin 20.3 96 0.0033 19.8 3.4 19 46-64 104-122 (137)
309 2rem_A Disulfide oxidoreductas 20.1 1.2E+02 0.0042 20.8 4.1 12 71-82 171-182 (193)
No 1
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=100.00 E-value=6.1e-39 Score=250.42 Aligned_cols=129 Identities=50% Similarity=0.878 Sum_probs=118.2
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||+++|.+++++++|||..+...+..|+..+.|++||||++|+|++++.++...+|+++|++|.|++||.+++|+
T Consensus 96 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~~~~~~~- 174 (224)
T 1prx_A 96 EKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKR- 174 (224)
T ss_dssp SCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHHHHHHHC-
T ss_pred cCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhccCC-
Confidence 6899999999999999999998654322224333579999999999999999999999999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCCCCceEEeCCCCCceeEeccCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFPKGVDIVDMPSGVSYVRFTNDY 140 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~ylr~~~~~ 140 (140)
++|||||++|++||++|+++.++|+++|++|+++++|||||||||+|++|
T Consensus 175 ~~~p~~W~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (224)
T 1prx_A 175 VATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP 224 (224)
T ss_dssp EEBCTTCCTTSCEEECTTSCHHHHHHHCTTCCEECCCTTCCCCCEEECCC
T ss_pred cCCCCCCCCCCceEeCCCCCHHHHHHhhccCceeeccCCCCceEEeccCC
Confidence 99999999999999999999999999999999999999999999999987
No 2
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=2.4e-38 Score=249.38 Aligned_cols=127 Identities=51% Similarity=0.941 Sum_probs=116.0
Q ss_pred CCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCCe
Q psy1180 12 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTV 91 (140)
Q Consensus 12 ~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~~ 91 (140)
+++||+|+|.+++++++|||..+...+..|...+.|++||||++|+|+++++++...+|+++|++|.|++||.+++++ +
T Consensus 93 ~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq~~~~~~-~ 171 (233)
T 2v2g_A 93 DMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQLTAQKK-V 171 (233)
T ss_dssp SCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSS-E
T ss_pred CCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhccCC-c
Confidence 799999999999999999998654222224334679999999999999999999999999999999999999999998 9
Q ss_pred eecCCCCCCCceeeCCCCCCchhcccCCCCceEEeCCCCCceeEeccCC
Q psy1180 92 VTPANWKPGDKVMIHPAVKDDELPKLFPKGVDIVDMPSGVSYVRFTNDY 140 (140)
Q Consensus 92 ~~PanW~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~ylr~~~~~ 140 (140)
+|||||++|++||++|+++.++|+++|++ +++++|||||||||+|++|
T Consensus 172 ~~p~~W~~g~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 219 (233)
T 2v2g_A 172 ATPADWQPGDRCMVVPGVSAEEAKTLFPN-MEVKAVPSGKGYLRYTPQP 219 (233)
T ss_dssp EBCTTCCTTSCEEECTTSCHHHHHHHCTT-CEECCCTTCCSCCEEECCC
T ss_pred cCCCCcCcCCceEeCCCCCHHHHHHhcCC-ceEeccCCCCceEEEecCc
Confidence 99999999999999999999999999996 9999999999999999986
No 3
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=100.00 E-value=4.5e-37 Score=239.25 Aligned_cols=127 Identities=44% Similarity=0.799 Sum_probs=115.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||+++|.+++++++|||+.+...+..|...+.|++||||++|+|++++.++.+.+|+++|++|.|++||.+++|+
T Consensus 93 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq~~~~~~- 171 (220)
T 1xcc_A 93 NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTP- 171 (220)
T ss_dssp SCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSS-
T ss_pred CCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhhcCC-
Confidence 7899999999999999999998654322224334579999999999999999999999999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccC-CCCceEEeCCCCCceeEeccC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLF-PKGVDIVDMPSGVSYVRFTND 139 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~-~~~~~~~~~p~~~~ylr~~~~ 139 (140)
++|||||++|++||++|+++.++|+++| |+ +++++|||++||||+|++
T Consensus 172 ~~~p~~w~~g~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 220 (220)
T 1xcc_A 172 VATPVNWNEGDKCCVIPTLQDDEISKHFKNE-ITKVEMPSKKKYLRFVNL 220 (220)
T ss_dssp EEBCTTCCTTSCEEECTTCCGGGHHHHCSSC-EEECCCTTCCCCCEEECC
T ss_pred cccCCCcCcCCceEeCCCCCHHHHHHHhcCC-ceEeecCCCCceeEeccC
Confidence 9999999999999999999999999999 75 999999999999999985
No 4
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-34 Score=223.84 Aligned_cols=101 Identities=29% Similarity=0.550 Sum_probs=93.2
Q ss_pred cCCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCC
Q psy1180 10 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNN 89 (140)
Q Consensus 10 ~~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~ 89 (140)
+.+++||||||++++++++|||+.++. |+ +.|+||||||+|+||++++++.++|||++|+||+|+|||++++|+
T Consensus 113 ~~~l~fpllsD~~~~vak~YGv~~~~~----g~--~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ~~~~~~ 186 (216)
T 3sbc_A 113 LGPINIPLLADTNHSLSRDYGVLIEEE----GV--ALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNG 186 (216)
T ss_dssp CCSCSSCEEECTTSHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHC
T ss_pred ccCcccceEeCCCCHHHHHcCCeeccC----Cc--eeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhhhHhhcC
Confidence 568999999999999999999998765 76 569999999999999999999999999999999999999999998
Q ss_pred CeeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 90 TVVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 90 ~~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
++|||||+||+++|+ |+ .++++++|++
T Consensus 187 -~~~Pa~W~~G~~~i~-p~--~~~~~~~~~~ 213 (216)
T 3sbc_A 187 -TVLPCNWTPGAATIK-PT--VEDSKEYFEA 213 (216)
T ss_dssp -CBBCTTCCTTSCCBC-CS--TTTHHHHHHH
T ss_pred -CCcCCCCCCCCceec-CC--HHHHHHHHHH
Confidence 999999999999987 54 4889999864
No 5
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.98 E-value=8.8e-33 Score=217.14 Aligned_cols=102 Identities=32% Similarity=0.580 Sum_probs=68.9
Q ss_pred cCCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCC
Q psy1180 10 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNN 89 (140)
Q Consensus 10 ~~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~ 89 (140)
+.+++||||||++++|+++|||+.+.. |+ +.|+||||||+|+||++++++..+|||++|+||+|+|||++++|+
T Consensus 117 ~~~l~fpllsD~~~~va~~yGv~~~~~----g~--~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ~~~~~~ 190 (219)
T 3tue_A 117 LGTMAIPILADKTKNIARSYGVLEESQ----GV--AYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHG 190 (219)
T ss_dssp CCSCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHC-
T ss_pred ccccccccccCcccHHHHHcCCcccCC----Ce--eEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhhhHHhcC
Confidence 568999999999999999999998764 76 569999999999999999999999999999999999999999998
Q ss_pred CeeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 90 TVVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 90 ~~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
++|||||+||+++|+|++ ....++||++
T Consensus 191 -~~~Pa~W~~G~~~i~p~~--~~~~e~y~~k 218 (219)
T 3tue_A 191 -EVCPANWKKGDPGMKPEP--NASVEGYFSK 218 (219)
T ss_dssp -------------------------------
T ss_pred -CCcCCCCCCCCccccCCC--ccchhhhccC
Confidence 999999999999998643 2334457754
No 6
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.97 E-value=3.9e-32 Score=216.41 Aligned_cols=118 Identities=30% Similarity=0.519 Sum_probs=109.7
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++|||..+.. |. .+.|++||||++|+|+++++++.++||+++|++|+|++||.+++|+
T Consensus 94 ~~i~fPil~D~~~~ia~~ygv~~~~~----g~-~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~~~~~~- 167 (249)
T 3a2v_A 94 VRIPFPIIADPQGTVARRLGLLHAES----AT-HTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLK- 167 (249)
T ss_dssp CCCCSCEEECTTSHHHHHHTCCCTTC----SS-SCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHT-
T ss_pred CCCceeEEECCchHHHHHhCCccccC----CC-cccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHhccccC-
Confidence 58999999999999999999997654 43 1469999999999999999999999999999999999999999998
Q ss_pred eeecCCCCC-----CCceeeCCCCCCchhcccCCC-CceEEeCCCCCceeEeccCC
Q psy1180 91 VVTPANWKP-----GDKVMIHPAVKDDELPKLFPK-GVDIVDMPSGVSYVRFTNDY 140 (140)
Q Consensus 91 ~~~PanW~~-----G~~~~~~p~~~~~~~~~~~~~-~~~~~~~p~~~~ylr~~~~~ 140 (140)
++||||| + |++||++|+++.++|+++|++ |++++ +||||++++|
T Consensus 168 ~~~Pa~W-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 217 (249)
T 3a2v_A 168 RAVPADW-PNNEIIGEGLIVPPPTTEDQARARMESGQYRSL-----DWWFCWDTPA 217 (249)
T ss_dssp CBBCTTT-TSBTTTBTCEEECCCCSHHHHHHHHHHTCSEEE-----ETTEEEECCS
T ss_pred ccCCCCC-CCCCCCCCCeecCCCCCHHHHHHhcccCCCccc-----cceeEeeeCC
Confidence 9999999 9 999999999999999999997 79998 8999999985
No 7
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.90 E-value=5.1e-24 Score=169.25 Aligned_cols=100 Identities=29% Similarity=0.495 Sum_probs=67.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..+.. |. +.|++||||++|+|++++.++...+++++|+|+.|++||.+++++
T Consensus 153 ~~~~fp~l~D~~~~va~~ygv~~~~~----g~--~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq~~~~~~- 225 (254)
T 3tjj_A 153 GPIRIPLLSDLTHQISKDYGVYLEDS----GH--TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHG- 225 (254)
T ss_dssp CSCSSCEEECTTSHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHC-
T ss_pred cccccceeeCcHHHHHHHcCCccccC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhccccccC-
Confidence 47999999999999999999986653 54 469999999999999999999999999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
++||+||+||+++|++++ ++.+++|.+
T Consensus 226 ~~cp~~W~~g~~~~~~~~---~~~~~~~~~ 252 (254)
T 3tjj_A 226 EVAPAGWKPGSETIIPDP---AGKLKYFDK 252 (254)
T ss_dssp ------------------------------
T ss_pred ccccCCCCCCCceeccCh---hHHHHHhhc
Confidence 999999999999998754 777788753
No 8
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.88 E-value=5.1e-23 Score=161.70 Aligned_cols=99 Identities=28% Similarity=0.489 Sum_probs=89.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|++++++++||+..+.. |+ ..|++||||++|+|++++.++...+++++|+++.|++||.+++++
T Consensus 139 ~~~~fp~l~D~~~~v~~~ygv~~~~~----g~--~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq~~~~~~- 211 (240)
T 3qpm_A 139 GPMKIPLLSDLTHQISKDYGVYLEDQ----GH--TLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKHG- 211 (240)
T ss_dssp CSCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHS-
T ss_pred CCCceeEEeCchHHHHHHhCCccccC----CC--ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhhhhhhcC-
Confidence 47999999999999999999986653 65 469999999999999999999999999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFP 119 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~ 119 (140)
++||+||++|+++|++++ ++.+++|.
T Consensus 212 ~~cp~~W~~g~~~~~~~~---~~~~~~~~ 237 (240)
T 3qpm_A 212 EVCPAGWKPGSDTIIPDP---SGKLKYFD 237 (240)
T ss_dssp CBBCTTCCTTSCCBCSST---TTTHHHHC
T ss_pred CccCCCCCCCCceecCCH---HHHHHHHh
Confidence 999999999999998754 66777764
No 9
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.86 E-value=5e-22 Score=153.40 Aligned_cols=100 Identities=27% Similarity=0.480 Sum_probs=64.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..+.. |. ..|++||||++|+|++++.++...+++.+|++++|++|+.+++++
T Consensus 118 ~~~~fp~l~D~~~~i~~~ygv~~~~~----g~--~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~- 190 (220)
T 1zye_A 118 GHMNIALLSDLTKQISRDYGVLLEGP----GL--ALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAHG- 190 (220)
T ss_dssp CSCSSEEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHTTC---
T ss_pred cCCceEEEECCcHHHHHHhCCeecCC----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhhcccC-
Confidence 47899999999999999999986543 54 469999999999999999988888999999999999999999888
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
+.||+||++|+++|++|+ ++++++|++
T Consensus 191 ~~cp~~W~~g~~~~~~~~---~~~~~~~~~ 217 (220)
T 1zye_A 191 EVSPANWTPESPTIKPHP---TASREYFEK 217 (220)
T ss_dssp ------------------------------
T ss_pred CccCCCCCCCCceecCCH---HHHHHHHHh
Confidence 999999999999999765 888888875
No 10
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=150.32 Aligned_cols=99 Identities=28% Similarity=0.485 Sum_probs=86.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..... |. ..|++||||++|+|++++.++...+++++|+++.|++|+.+++++
T Consensus 110 ~~~~fp~l~D~~~~~~~~ygv~~~~~----g~--~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~- 182 (211)
T 2pn8_A 110 GPIRIPLLSDLTHQISKDYGVYLEDS----GH--TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHG- 182 (211)
T ss_dssp CSCSSCEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHC-
T ss_pred cCCceEEEECCchHHHHHcCCcccCC----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhcccCC-
Confidence 37899999999999999999975542 53 369999999999999999888888899999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFP 119 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~ 119 (140)
++||+||++|+++|++|+ +..+++|.
T Consensus 183 ~~~p~~w~~g~~~~~~~~---~~~~~~~~ 208 (211)
T 2pn8_A 183 EVCPAGWKPGSETIIPDP---AGKLKYFD 208 (211)
T ss_dssp CBBCTTCCTTSCCBCSST---TTHHHHHC
T ss_pred cccCCCCCCCCccccCCc---hhHHHHhh
Confidence 999999999999999876 44555554
No 11
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.84 E-value=7.2e-21 Score=146.39 Aligned_cols=98 Identities=27% Similarity=0.489 Sum_probs=86.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+.. +. |. +.|++||||++|+|++++.++...+++.+|+++.|++|+.+++++
T Consensus 114 ~~~~fp~l~D~~~~~~~~ygv~~-~~----g~--~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~~~~~~- 185 (213)
T 2i81_A 114 GNIKHTLLSDITKSISKDYNVLF-DD----SV--SLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYG- 185 (213)
T ss_dssp CSCSSEEEECTTSHHHHHTTCEE-TT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCceEEECCchHHHHHhCCcc-cc----CC--cccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhhhhcC-
Confidence 47999999999999999999986 22 54 469999999999999999888888999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFP 119 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~ 119 (140)
+.||+||++|+++|+++. +..+++|.
T Consensus 186 ~~cp~~w~~g~~~~~~~~---~~~~~~~~ 211 (213)
T 2i81_A 186 DVCPANWQKGKVSMKPSE---EGVAQYLS 211 (213)
T ss_dssp CBCCTTCCTTSCCBCSST---TTHHHHTT
T ss_pred CCcCCCCCcCCccccCCc---hhHHHHhh
Confidence 999999999999998654 45566774
No 12
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.84 E-value=5.9e-21 Score=144.48 Aligned_cols=100 Identities=33% Similarity=0.599 Sum_probs=87.7
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..... |. ..|++||||++|+|++++.++...+++.+|+++.|++|+.+++++
T Consensus 98 ~~~~~p~l~D~~~~~~~~ygv~~~~~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~~~~~~- 170 (202)
T 1uul_A 98 GQMNIPILADKTKCIMKSYGVLKEED----GV--AYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHG- 170 (202)
T ss_dssp CSCSSCEEECTTCHHHHHHTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHS-
T ss_pred CCCceeEEECCchHHHHHcCCccCCC----Cc--eeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhhhhhcC-
Confidence 48999999999999999999986543 54 469999999999999999988888999999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
+.||+||++|+++|+++. +..+++|.+
T Consensus 171 ~~~p~~w~~g~~~~~~~~---~~~~~~~~~ 197 (202)
T 1uul_A 171 EVCPANWKPGDKTMKPDP---EKSKEYFGA 197 (202)
T ss_dssp CBBCTTCCTTSCCBCSST---GGGHHHHCC
T ss_pred CccCCCcCCCCceeccCh---hhHHHHHhh
Confidence 999999999999998764 445667654
No 13
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.83 E-value=2.2e-20 Score=140.23 Aligned_cols=89 Identities=25% Similarity=0.478 Sum_probs=80.2
Q ss_pred CCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCCe
Q psy1180 12 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTV 91 (140)
Q Consensus 12 ~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~~ 91 (140)
+++||+++|.+++++++||+..... |+ +.|++||||++|+|++++..+...+++.+++++.|++|+.+++|+++
T Consensus 90 ~~~fp~l~D~~~~~~~~ygv~~~~~----g~--~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~p~~ 163 (186)
T 1n8j_A 90 KIKYAMIGDPTGALTRNFDNMREDE----GL--ADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGE 163 (186)
T ss_dssp GCCSEEEECTTSHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHSTTC
T ss_pred CCceeEEECCchHHHHHhCCccCCC----Cc--eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHHHhhcCCC
Confidence 7899999999999999999975542 54 46999999999999999988877888999999999999999999559
Q ss_pred eecCCCCCCCceeeC
Q psy1180 92 VTPANWKPGDKVMIH 106 (140)
Q Consensus 92 ~~PanW~~G~~~~~~ 106 (140)
.|||||++|++++++
T Consensus 164 ~~p~~w~~~~~~~~~ 178 (186)
T 1n8j_A 164 VCPAKWKEGEATLAP 178 (186)
T ss_dssp BBCTTCCTTSCCBCC
T ss_pred ccCCCCCCCCccccC
Confidence 999999999999974
No 14
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.82 E-value=2.9e-20 Score=139.21 Aligned_cols=97 Identities=32% Similarity=0.511 Sum_probs=74.7
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+.. .. |+ ..|++||||++|+|++++.++...+++.+|+++.|++|+.+++++
T Consensus 93 ~~~~~~~l~D~~~~~~~~~gv~~-~~----g~--~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~- 164 (192)
T 2h01_A 93 GNIKHTLISDISKSIARSYDVLF-NE----SV--ALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQHHEKYG- 164 (192)
T ss_dssp CSCSSEEEECTTSHHHHHTTCEE-TT----TE--ECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCcCeEECCcHHHHHHhCCcC-cC----Cc--eeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhhhhcC-
Confidence 47999999999999999999976 22 54 369999999999999999988888899999999999999999998
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLF 118 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~ 118 (140)
+.||+||++|+++|+++. +..+++|
T Consensus 165 ~~cp~~w~~~~~~~~~~~---~~~~~~~ 189 (192)
T 2h01_A 165 DVCPANWQKGKESMKPSE---EGVAKYL 189 (192)
T ss_dssp CCCCSSCCCC------------------
T ss_pred CCccCCCCCCCccccCCc---hhhhhHh
Confidence 999999999999998754 4444444
No 15
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.82 E-value=4.1e-20 Score=139.12 Aligned_cols=98 Identities=29% Similarity=0.511 Sum_probs=85.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..... |. ..|++||||++|+|++.+.++...+++++|+++.|++++..++++
T Consensus 96 ~~~~~p~l~D~~~~~~~~~gv~~~~~----~~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~~~~~~~- 168 (197)
T 1qmv_A 96 GPLNIPLLADVTRRLSEDYGVLKTDE----GI--AYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHG- 168 (197)
T ss_dssp CSCSSCEEECTTCHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHC-
T ss_pred CCCceEEEECCcHHHHHHcCCccCCC----Cc--eeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcchhhccC-
Confidence 48999999999999999999975543 44 469999999999999999988888999999999999999999888
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLF 118 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~ 118 (140)
+.||+||++|+++|++|. +..++++
T Consensus 169 ~~cp~~w~~g~~~~~~~~---~~~~~~~ 193 (197)
T 1qmv_A 169 EVCPAGWKPGSDTIKPNV---DDSKEYF 193 (197)
T ss_dssp CBBCTTCCTTSCCBCSSH---HHHHHHH
T ss_pred CccCCCcCcCCccccCCc---cchhhHh
Confidence 999999999999998754 4444443
No 16
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.79 E-value=2.8e-19 Score=138.80 Aligned_cols=97 Identities=27% Similarity=0.507 Sum_probs=68.0
Q ss_pred CCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCCe
Q psy1180 12 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTV 91 (140)
Q Consensus 12 ~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~~ 91 (140)
+++||+++|.+++++++||+. ... |. ..|++||||++|+|++.+.++...+++.+++++.|++|+..++++ +
T Consensus 119 ~~~fp~l~D~~~~~~~~ygv~-~~~----g~--~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~~~~~~-~ 190 (221)
T 2c0d_A 119 NVEFTLVSDINKDISKNYNVL-YDN----SF--ALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSG-E 190 (221)
T ss_dssp SCSSEEEECTTSHHHHHTTCE-ETT----TE--ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHC-C
T ss_pred CCceEEEECCchHHHHHcCCc-ccC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhcCC-C
Confidence 789999999999999999997 442 53 469999999999999999888777889999999999999999998 9
Q ss_pred eecCCCCCCCceeeCCCCCCchhcccCC
Q psy1180 92 VTPANWKPGDKVMIHPAVKDDELPKLFP 119 (140)
Q Consensus 92 ~~PanW~~G~~~~~~p~~~~~~~~~~~~ 119 (140)
.||+||++|+++|.++. +..+++|.
T Consensus 191 ~cp~~W~~g~~~~~~~~---~~~~~~~~ 215 (221)
T 2c0d_A 191 VCPINWKKGQKAFKPTT---ESLIDYMN 215 (221)
T ss_dssp SCC-------------------------
T ss_pred cCCCCCCCCCccccCCc---HHHHHHHH
Confidence 99999999999997643 44556664
No 17
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.77 E-value=1.7e-18 Score=133.56 Aligned_cols=91 Identities=31% Similarity=0.591 Sum_probs=81.6
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+++++++||+..... |+ ..|++||||++|+|++.+......+++++++++.|+++|.+++++
T Consensus 131 ~~~~~~~l~D~~~~~~~~ygv~~~~~----g~--~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~- 203 (222)
T 3ztl_A 131 GHMKIPLLADRKQEISKAYGVFDEED----GN--AFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHG- 203 (222)
T ss_dssp CSCSSCEEECSSSHHHHHTTCBCTTT----SS--BCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHS-
T ss_pred cccceeEEeCCchHHHHHcCCeecCC----CC--ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhcccccC-
Confidence 48999999999999999999986543 54 359999999999999999988888889999999999999999998
Q ss_pred eeecCCCCCCCceeeCCC
Q psy1180 91 VVTPANWKPGDKVMIHPA 108 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~ 108 (140)
+.||+||++|++++.+|+
T Consensus 204 ~~c~~~w~~~~~~~~~~~ 221 (222)
T 3ztl_A 204 EVCPVNWKRGQHGIKVNQ 221 (222)
T ss_dssp CBBCTTCCTTSCCBCC--
T ss_pred ccCCcCcCCCCccccCCC
Confidence 999999999999998764
No 18
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.72 E-value=1.5e-17 Score=123.64 Aligned_cols=90 Identities=23% Similarity=0.489 Sum_probs=67.2
Q ss_pred CCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCCe
Q psy1180 12 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTV 91 (140)
Q Consensus 12 ~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~~ 91 (140)
+++||+++|.+.+++++||+..... |. ..|++||||++|+|++.+......+++.+++++.|++|+..++++++
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~ 164 (187)
T 1we0_A 91 SIEYIMIGDPSQTISRQFDVLNEET----GL--ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGE 164 (187)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTT----TE--ECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHHHHTSTTC
T ss_pred CCCceEEECCchHHHHHhCCCcCCC----Cc--eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhhhhCCCc
Confidence 7899999999999999999975442 43 35999999999999999988877788999999999999999999559
Q ss_pred eecCCCCCCCceeeCC
Q psy1180 92 VTPANWKPGDKVMIHP 107 (140)
Q Consensus 92 ~~PanW~~G~~~~~~p 107 (140)
.||+||++|+++|+.+
T Consensus 165 ~~p~~w~~~~~~~~~~ 180 (187)
T 1we0_A 165 VCPAKWEEGGETLKPS 180 (187)
T ss_dssp CC--------------
T ss_pred ccccccccCCceeecC
Confidence 9999999999999853
No 19
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.71 E-value=2.4e-17 Score=123.82 Aligned_cols=99 Identities=27% Similarity=0.556 Sum_probs=68.1
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||+++|.+++++++||+..+. |. ..|++||||++|+|++.+......+++.+++++.|++++...+++
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~~-----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~- 166 (198)
T 1zof_A 95 GQVSFPMVADITKSISRDYDVLFEE-----AI--ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHG- 166 (198)
T ss_dssp CCCSSCEEECTTSHHHHHTTCEETT-----TE--ECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHHHSSC-
T ss_pred cCceeEEEECCchHHHHHhCCcccC-----Cc--ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHhhccC-
Confidence 7899999999999999999997532 43 359999999999999999887777889999999999999999888
Q ss_pred eeecCCCCCCCceeeCCCCCCchhcccCCC
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKLFPK 120 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~~~~ 120 (140)
+.||+||++|++++++.. +..+.++++
T Consensus 167 ~~~p~~w~~~~~~~~~~~---~~~~~~~~~ 193 (198)
T 1zof_A 167 EVCPAGWRKGDKGMKATH---QGVAEYLKE 193 (198)
T ss_dssp CCCC--------------------------
T ss_pred CccCCcCcCCCccccCCc---ccccceecc
Confidence 999999999999997643 344555543
No 20
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.58 E-value=4.9e-15 Score=111.05 Aligned_cols=84 Identities=31% Similarity=0.633 Sum_probs=58.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
.+++||+++|.+.+++++||+... . |. ..|++||||++|+|++.+......+++.+++++.|++|+. +
T Consensus 104 ~~~~~~~~~d~~~~~~~~~~v~~~-~----g~--~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~----~- 171 (195)
T 2bmx_A 104 KTLPFPMLSDIKRELSQAAGVLNA-D----GV--ADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS----D- 171 (195)
T ss_dssp GGCCSCEEECTTSHHHHHHTCBCT-T----SS--BCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC------
T ss_pred cCCceeEEeCCchHHHHHhCCccc-C----CC--ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh----C-
Confidence 378999999999999999998755 2 53 3599999999999999998877778899999999999875 4
Q ss_pred eeecCCCCCCCceeeC
Q psy1180 91 VVTPANWKPGDKVMIH 106 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~ 106 (140)
+.||+||++|++++++
T Consensus 172 ~~~p~~w~~~~~~~~~ 187 (195)
T 2bmx_A 172 ELCASNWRKGDPTLDA 187 (195)
T ss_dssp ----------------
T ss_pred CCcCcccccCCcccCC
Confidence 7899999999999964
No 21
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.57 E-value=5.7e-15 Score=109.01 Aligned_cols=71 Identities=23% Similarity=0.381 Sum_probs=59.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCc-cHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR-SVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr-~~~EiLr~l~alq 83 (140)
++++||+|+|++++++++||++.++.....++ +.|+|||||++|+|+++++.+...+| +++|+|+.|++|.
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~--~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMV--AKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEEE--ECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcCC--eeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 78999999999999999999986653221223 57999999999999999998877665 8999999999874
No 22
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.55 E-value=5.1e-15 Score=121.00 Aligned_cols=96 Identities=19% Similarity=0.275 Sum_probs=77.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||||||++++++++||++.. |. +.|+|||||++|+|++++. ...+++|++|||+.|++|+. +++.
T Consensus 75 ~~l~fp~l~D~~~~v~~~ygv~~~------~~--~~r~tfiId~~G~i~~~~~-~v~~~~h~~~~l~~~~~~~~-~~~~- 143 (322)
T 4eo3_A 75 NDLKVTLLSDPEGILHEFFNVLEN------GK--TVRSTFLIDRWGFVRKEWR-RVKVEGHVQEVKEALDRLIE-EDLS- 143 (322)
T ss_dssp HTCCSEEEECTTCHHHHHTTCEET------TE--ECCEEEEECTTSBEEEEEE-SCCSTTHHHHHHHHHHHHHH-HHTS-
T ss_pred hCCceEEEEcCchHHHHhcCCCCC------Cc--CccEEEEECCCCEEEEEEe-CCCccccHHHHHHHHhhhch-hhhH-
Confidence 689999999999999999999843 33 4699999999999999985 56888999999999999985 4565
Q ss_pred eeecCCCCCCCceeeCCCCCCchhccc
Q psy1180 91 VVTPANWKPGDKVMIHPAVKDDELPKL 117 (140)
Q Consensus 91 ~~~PanW~~G~~~~~~p~~~~~~~~~~ 117 (140)
+....+|+.--.-+.+-+++.|..++.
T Consensus 144 ~~~~I~~RRSiR~F~~~~V~~e~l~~i 170 (322)
T 4eo3_A 144 LNKHIEWRRARRALKKDRVPREELELL 170 (322)
T ss_dssp CCHHHHHCCCCCCBCCCCCCHHHHHHH
T ss_pred HHHHHHhhhccCCcCccccCHHHHHHH
Confidence 677777776666665555666666554
No 23
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.51 E-value=5.3e-14 Score=102.70 Aligned_cols=71 Identities=28% Similarity=0.373 Sum_probs=58.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCc-cHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR-SVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr-~~~EiLr~l~al 82 (140)
++++||+|+|++++++++||+...... ..|..++.|+|||||++|+|+++++.+...++ +++|++++|++|
T Consensus 85 ~~~~~p~l~D~~~~v~~~ygv~~~~~~-~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 85 NKLNFTILSDYNREVVKKYNVAWEFPA-LPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEECTT-STTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cCCcEEEEEcCCcHHHHHcCCcccccc-CCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 689999999999999999999754321 11333467999999999999999998876655 899999999987
No 24
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.38 E-value=4.9e-13 Score=100.17 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=57.7
Q ss_pred CCCc--eeEEEcCccHHHHHcCCCccccc-ccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFP--FAIIGDENRDLAVKLDLLDEENK-NNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~--FPLlsD~~~~va~~yGv~~~~~~-~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++ ||+|+|++++++++||+..++.. +..|...+.|+||||| +|+|+++++++...||+++|+.++|++|
T Consensus 100 ~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 100 HKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred hCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 4566 99999999999999999865310 0012112569999999 9999999999999999999999999875
No 25
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.28 E-value=7.3e-12 Score=95.04 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=54.6
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccc-eeeeEEEEECCCCcEEEEEEccCCC---------CccHHHHHHHH
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPAST---------GRSVDEILRVL 79 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~---------gr~~~EiLr~l 79 (140)
+++ +||||||++++++++|||+.+... .|+. .+.|++|||| +|+|+++++++... .++++++|++|
T Consensus 101 ~~~~~f~lLsD~~~~~a~~yGv~~~~~~--~G~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L 177 (182)
T 1xiy_A 101 MDIKKIKYISDGNSSFTDSMNMLVDKSN--FFMGMRPWRFVAIVE-NNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFL 177 (182)
T ss_dssp TTCCSSEEEECTTSHHHHHTTCEEECGG--GTCCEEECCEEEEEE-TTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHH
T ss_pred cCCCCceEEEeCchHHHHHhCCceeccc--cCCCCceEEEEEEEc-CCEEEEEEEeCCcccccccCcccCCCHHHHHHHH
Confidence 456 799999999999999999855321 1321 2579999999 99999999987543 37899999999
Q ss_pred HhhH
Q psy1180 80 DSLQ 83 (140)
Q Consensus 80 ~alq 83 (140)
++.+
T Consensus 178 ~~~~ 181 (182)
T 1xiy_A 178 KNNQ 181 (182)
T ss_dssp HCC-
T ss_pred Hhcc
Confidence 8643
No 26
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.23 E-value=2.2e-11 Score=95.44 Aligned_cols=72 Identities=15% Similarity=0.105 Sum_probs=58.3
Q ss_pred CCC-ceeEEEcC-ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCC-CccHHHHHHHHHhhHhh
Q psy1180 11 GDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST-GRSVDEILRVLDSLQLF 85 (140)
Q Consensus 11 ~~l-~FPLlsD~-~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~-gr~~~EiLr~l~alq~~ 85 (140)
+++ +||+|||. +++++++||+...... ..|+ +.|++||||++|+|+++++.+... .++++++|++|++++..
T Consensus 103 ~gl~~fplLsD~~~~~vak~yGv~~~~~~-~~G~--~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~ 177 (224)
T 3keb_A 103 HGLPNIALLSTLRGRDFHKRYGVLITEYP-LSGY--TSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQ 177 (224)
T ss_dssp HCCTTCEEEESTTCTTHHHHTTCBCCSTT-STTC--BCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEcCCchHHHHHhCCcccccc-ccCC--ccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhc
Confidence 567 69999999 6999999999865310 1254 569999999999999999987655 46899999999988653
No 27
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.16 E-value=1.3e-10 Score=84.10 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=61.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||+++|.+.+++++||+... + .+.|++||||++|+|++.+..+.....+++++++.|++||..++..
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~v~~~------~--~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~~~~~~~- 154 (161)
T 3drn_A 84 YKLPFILVSDPDKKIRELYGAKGF------I--LPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIKEEEISL- 154 (161)
T ss_dssp TTCCSEEEECTTSHHHHHTTCCCS------S--SCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHHHHHHC--
T ss_pred hCCCceEEECCcHHHHHHcCCCCc------C--cccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhhhhhcch-
Confidence 678999999999999999999721 1 2469999999999999999886777889999999999999988876
Q ss_pred eeec
Q psy1180 91 VVTP 94 (140)
Q Consensus 91 ~~~P 94 (140)
...|
T Consensus 155 ~~~~ 158 (161)
T 3drn_A 155 EHHH 158 (161)
T ss_dssp ----
T ss_pred hhcc
Confidence 4443
No 28
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.15 E-value=8.1e-11 Score=87.20 Aligned_cols=72 Identities=18% Similarity=0.349 Sum_probs=56.7
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||+++|++++++++||+...............|++||||++|+|++++ ++....++++++++.|++|+
T Consensus 106 ~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 106 QGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW-RQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp HTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE-CSCCSTTHHHHHHHHHHHHH
T ss_pred cCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE-cCCCCCCCHHHHHHHHHHHh
Confidence 5789999999999999999997543211001111369999999999999998 55677788999999999886
No 29
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.13 E-value=4.8e-11 Score=90.49 Aligned_cols=68 Identities=16% Similarity=0.145 Sum_probs=50.1
Q ss_pred CCCc--eeEEEcCccHHHHHcCCCcccccccCccc-eeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFP--FAIIGDENRDLAVKLDLLDEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~--FPLlsD~~~~va~~yGv~~~~~~~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++ ||||||++++++++||+..+... .|+. .+.|++||| ++|+|+++++++. .++++.++.++|++|
T Consensus 104 ~~l~~~f~lLsD~~~~va~ayGv~~~~~~--~G~g~~s~R~tfII-~dG~I~~~~~~~~-~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 104 LHTAGKVRMMADGSAAFTHALGLTQDLSA--RGMGIRSLRYAMVI-DGGVVKTLAVEAP-GKFEVSDAASVLATL 174 (176)
T ss_dssp TTCTTTSEEEECTTCHHHHHHTCEEECGG--GTCCEEECCEEEEE-ETTEEEEEEECCT-TCCSSSSHHHHHHTC
T ss_pred hCCCCCceEEEcCchHHHHHhCCCccccc--cCCCcccccEEEEE-cCCEEEEEEEcCC-CCcchhhHHHHHHHh
Confidence 4566 99999999999999999866421 1421 146999999 9999999999873 345555555555554
No 30
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.08 E-value=2e-10 Score=82.56 Aligned_cols=72 Identities=17% Similarity=0.350 Sum_probs=56.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||+++|.+++++++||+.........+.....|++||||++|+|++++ .......+++++++.|++|+
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 90 QGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp HCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE-CSCCSTTHHHHHHHHHHHHC
T ss_pred hCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE-cCCCcccCHHHHHHHHHHHh
Confidence 5789999999999999999998643211001101269999999999999998 66667788999999999875
No 31
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.07 E-value=7.9e-11 Score=88.69 Aligned_cols=65 Identities=15% Similarity=0.106 Sum_probs=46.4
Q ss_pred ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCc---cHHHHHHHHH
Q psy1180 14 PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR---SVDEILRVLD 80 (140)
Q Consensus 14 ~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr---~~~EiLr~l~ 80 (140)
+||||||++++++++|||+.+......|. .+.|+||||| +|+|+++++++...+. +.++||+.++
T Consensus 103 ~f~lLSD~~~~~a~ayGv~~~~~~~g~g~-~~~R~tfvId-dG~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 103 KIRMLADMHGEFTRALGTELDSSKMLGNN-RSRRYAMLID-DNKIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp CSEEEECTTSHHHHHHTCBCCCHHHHSSC-CBCCEEEEEE-TTEEEEEEETTSCSHHHHHHHHHHC----
T ss_pred CeEEEEeCCchHHHHhCCceeccccCCCc-ceEEEEEEEe-CCEEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 89999999999999999986542100121 2579999999 9999999998876533 3566665543
No 32
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.03 E-value=5.4e-10 Score=81.26 Aligned_cols=66 Identities=15% Similarity=0.259 Sum_probs=54.9
Q ss_pred CCC-ceeEEEcC-ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC-CCCccHHHHHHHHHhh
Q psy1180 11 GDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA-STGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l-~FPLlsD~-~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~-~~gr~~~EiLr~l~al 82 (140)
+++ +||+++|. +++++++||+..... |. +.|++||||++|+|+++++.+. ....+++++++.|++|
T Consensus 98 ~~~~~~~~l~D~~~~~~~~~~gv~~~~~----g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 98 AGLDNVITLSDHRDLSFGENYGVVMEEL----RL--LARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp HTCSSCEEEECTTTCHHHHHHTCEETTT----TE--ECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred cCCCceEEccCCchhHHHHHhCCccccC----Cc--eeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 578 89999999 999999999986542 54 4699999999999999987664 4566899999998764
No 33
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.95 E-value=2.1e-09 Score=77.89 Aligned_cols=66 Identities=14% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCC-ceeEEEc-CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC-CCCccHHHHHHHHHhh
Q psy1180 11 GDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA-STGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l-~FPLlsD-~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~-~~gr~~~EiLr~l~al 82 (140)
+++ +||+++| .+++++++||+..... |+ +.|++||||++|+|++.+..+. ....+++++++.|++|
T Consensus 95 ~~~~~~~~l~D~~~~~~~~~~gv~~~~~----g~--~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 95 EGLDNAIMLSDYFDHSFGRDYALLINEW----HL--LARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp HTCTTSEEEECTTTCHHHHHHTCBCTTT----CS--BCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred cCCCCcEEecCCchhHHHHHhCCccccC----Cc--eEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 567 9999999 8999999999975432 54 3599999999999999998754 3456789999999864
No 34
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.94 E-value=2e-09 Score=76.96 Aligned_cols=67 Identities=12% Similarity=0.262 Sum_probs=56.5
Q ss_pred CCCceeEEEcC--ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDE--NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~--~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||+++|. +++++++||+..... |+ |.|++||||++|+|++.+.........++++++.|++||
T Consensus 91 ~~~~~~~~~d~~~~~~~~~~~~v~~~~~----~~--p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 91 SGFTFPLLSDFWPHGAVSQAYGVFNEQA----GI--ANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp HTCCSCEEECTTTTTHHHHHTTCEETTT----TE--ECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred cCCCceEEecCCcChHHHHHcCCccccC----CC--eeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 56899999996 999999999875432 44 568999999999999999887666678999999999875
No 35
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.94 E-value=2.5e-09 Score=78.76 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=60.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC----CCC-ccHHHHHHHHHhhHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA----STG-RSVDEILRVLDSLQLF 85 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~----~~g-r~~~EiLr~l~alq~~ 85 (140)
++++||++.|.+.+++++||+. + .+++||||++|+|++...... ..| .+.+++.+.|+++...
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 108 LGYPFPYLYDETQEVAKAYDAA--------C----TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HTCCSCEEECSSCHHHHHHTCC--------E----ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred cCCCceEEECCchHHHHHhCCC--------C----CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 5689999999999999999975 3 389999999999999865332 123 2678888888876432
Q ss_pred h-----hCCCeeecCCCCCCC
Q psy1180 86 Y-----KNNTVVTPANWKPGD 101 (140)
Q Consensus 86 ~-----~~~~~~~PanW~~G~ 101 (140)
. ..+...||..|++|+
T Consensus 176 ~~~~~~~~~~~gC~~~~~~~~ 196 (196)
T 2ywi_A 176 RPVPEKQKPSIGCSIKWKPSA 196 (196)
T ss_dssp CCCCSCCCCCEEEECCCCCCC
T ss_pred CCCCCCCCCCCceeeeeccCC
Confidence 2 122378999999986
No 36
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.93 E-value=1.1e-09 Score=82.64 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=48.0
Q ss_pred CCCc--eeEEEcCccHHHHHcCCCcccccccCccc-eeeeEEEEECCCCcEEEEEEccCCCC---ccHHHHHHH
Q psy1180 11 GDFP--FAIIGDENRDLAVKLDLLDEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPASTG---RSVDEILRV 78 (140)
Q Consensus 11 ~~l~--FPLlsD~~~~va~~yGv~~~~~~~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~g---r~~~EiLr~ 78 (140)
++++ ||+|+|++++++++||+...... .|+. .+.|++|||| +|+|+++++++...+ .+++++|+.
T Consensus 113 ~~~~~~fp~l~D~~~~va~~yGv~~~~~~--~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 113 SGGMGKIHFLSDWNAAFTKAIGMEIDLSA--GTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp HTCTTTSEEEECTTCHHHHHTTCEEEEGG--GTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred hCCCCceEEEEcCchHHHHHcCCceeccc--cCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 4677 99999999999999999865321 1321 1469999996 999999999986544 345555543
No 37
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.92 E-value=1.9e-09 Score=79.19 Aligned_cols=80 Identities=15% Similarity=0.268 Sum_probs=58.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC---C-CCccHHHHHHHHHhhHhhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA---S-TGRSVDEILRVLDSLQLFY 86 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~---~-~gr~~~EiLr~l~alq~~~ 86 (140)
++++||++.|.+.+++++||+. + .+++||||++|+|++...... . ...+.+++.+.|+++....
T Consensus 94 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 94 HGIFFPYLLDETQEVAKAYRAL--------R----TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp HTCCSCEEECSSSHHHHHTTCC--------E----ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred hCCCceEEECCcchHHHHcCCC--------C----CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 5689999999999999999975 3 389999999999998832111 0 1124667777777764322
Q ss_pred h-----CCCeeecCCCCCCCc
Q psy1180 87 K-----NNTVVTPANWKPGDK 102 (140)
Q Consensus 87 ~-----~~~~~~PanW~~G~~ 102 (140)
. .+...||.+|+||++
T Consensus 162 ~~~~~~~~~~gc~~~~~~~~~ 182 (188)
T 2cvb_A 162 EPPLKEAPAIGCTIKWRPGNE 182 (188)
T ss_dssp CCCSSCCCCCSEECCCCTTCC
T ss_pred CCCcccCCCCceEEEecCCCC
Confidence 1 123679999999875
No 38
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.91 E-value=3.3e-09 Score=80.85 Aligned_cols=80 Identities=10% Similarity=0.207 Sum_probs=58.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCC-----CCccHHHHHHHHHhhHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS-----TGRSVDEILRVLDSLQLF 85 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~-----~gr~~~EiLr~l~alq~~ 85 (140)
++++||+++|.+.+++++||+. + .+++||||++|+|++....... .....+++.++|+++...
T Consensus 121 ~~~~~~~l~D~~~~~~~~~~v~--------~----~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 121 YGYGFPYLKDASQSVAKAYGAA--------C----TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HTCCSCEEECTTCHHHHHHTCC--------E----ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred hCCCccEEECCccHHHHHcCCC--------C----CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 5789999999999999999986 3 3899999999999987654322 122457777777776432
Q ss_pred h-----hCCCeeecCCCCCCCc
Q psy1180 86 Y-----KNNTVVTPANWKPGDK 102 (140)
Q Consensus 86 ~-----~~~~~~~PanW~~G~~ 102 (140)
. ..+...||.+|.+|++
T Consensus 189 ~~~~~~~~~~~GC~i~w~~~~~ 210 (218)
T 3u5r_E 189 KDVGTTQVPSIGCNIKWTAGNE 210 (218)
T ss_dssp CCCCSCCCCCEEEECCCCCC--
T ss_pred CCCCcCCcCCCCeeEEeCCCCC
Confidence 2 1223679999999866
No 39
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.90 E-value=1.6e-09 Score=80.09 Aligned_cols=68 Identities=18% Similarity=0.141 Sum_probs=50.3
Q ss_pred CceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++||+++|++++++++||+..+......|+. ..|.+|||| +|+|+++++.+...+++..++.++|++|
T Consensus 104 ~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~-~~~~t~~I~-~G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 104 DAIEFYGDFDGSFHKSLELTTDLSAGLLGIR-SERWSAYVV-DGKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp TTSEEEECTTCHHHHHHTCEEECTTTTCCEE-ECCEEEEEE-TTEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred CceEEEECCccHHHHHhCCccccccccCCcc-cceeEEEEE-CCEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 4899999999999999999754311111321 358899999 9999999998887776656666666543
No 40
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.89 E-value=4.5e-09 Score=79.52 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=53.6
Q ss_pred CCC-ceeEEEcC-ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEcc-CCCCccHHHHHHHHH
Q psy1180 11 GDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP-ASTGRSVDEILRVLD 80 (140)
Q Consensus 11 ~~l-~FPLlsD~-~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~-~~~gr~~~EiLr~l~ 80 (140)
+++ +||+++|. +++++++||+..... ...|. ..|++||||++|+|+++++.+ ....++++++|++|+
T Consensus 131 ~~~~~f~~l~D~~~~~~~~~ygv~~~~~-~~~g~--~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 131 EGLSNVITLSTLRGADFKQAYGVAITEG-PLAGL--TARAVVVLDGQDNVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp TTCTTEEEEETTSCTHHHHHTTCEECSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred cCCCCceEEecCchHHHHHHhCceeecc-cCCCc--cccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhhC
Confidence 688 99999999 999999999975431 11143 359999999999999999865 466778999988763
No 41
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.86 E-value=2.7e-09 Score=77.59 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=48.4
Q ss_pred CCC--ceeEEEcCccHHHHHcCCCcccccccCccc-eeeeEEEEECCCCcEEEEEEccCCCCc---cHHHHHHH
Q psy1180 11 GDF--PFAIIGDENRDLAVKLDLLDEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPASTGR---SVDEILRV 78 (140)
Q Consensus 11 ~~l--~FPLlsD~~~~va~~yGv~~~~~~~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~gr---~~~EiLr~ 78 (140)
+++ +||+++|++++++++||+...... .|+. .+.|++|||| +|+|+++++.+ ..+| +++++|+.
T Consensus 92 ~~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~~~~~~~vl~~ 161 (162)
T 1tp9_A 92 YPENKHVKFLADGSATYTHALGLELDLQE--KGLGTRSRRFALLVD-DLKVKAANIEG-GGEFTVSSAEDILKD 161 (162)
T ss_dssp CTTCSSEEEEECTTSHHHHHTTCEEEETT--TTSEEEECCEEEEEE-TTEEEEEEECS-SSCCSSCSHHHHHTT
T ss_pred cCCCCCeEEEECCCchHHHHcCccccccc--CCCCccceeEEEEEE-CCEEEEEEeeC-CCCCccCCHHHHHhh
Confidence 456 899999999999999999743211 1311 2469999999 99999999887 5555 57777754
No 42
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.85 E-value=3.3e-09 Score=81.61 Aligned_cols=70 Identities=16% Similarity=0.266 Sum_probs=55.6
Q ss_pred CCCc-eeEEEcCccHHHHHcCCCcccccccCccc-eeeeEEEEECCCCcEEEEEEccCCCC-----ccHHHHHHHHHhhH
Q psy1180 11 GDFP-FAIIGDENRDLAVKLDLLDEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPASTG-----RSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~-FPLlsD~~~~va~~yGv~~~~~~~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~g-----r~~~EiLr~l~alq 83 (140)
++++ ||+++|++++++++||+...... .|+. .+.|++||| ++|+|+++++.+...+ ++++++|+.|++.+
T Consensus 90 ~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~ 166 (241)
T 1nm3_A 90 EKSENISFIPDGNGEFTEGMGMLVGKED--LGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQH 166 (241)
T ss_dssp TTCTTSEEEECTTSHHHHHTTCEEECTT--TTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTS
T ss_pred cCCCceEEEECCCcHHHHHhCceeeccc--ccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhhhc
Confidence 4675 99999999999999999754311 1320 145999999 9999999999887777 58999999998754
No 43
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.85 E-value=5.4e-09 Score=75.94 Aligned_cols=66 Identities=17% Similarity=0.121 Sum_probs=51.3
Q ss_pred CCC-ceeEEEcC-ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEc-cCCCCccHHHHHHHH
Q psy1180 11 GDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY-PASTGRSVDEILRVL 79 (140)
Q Consensus 11 ~~l-~FPLlsD~-~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~-~~~~gr~~~EiLr~l 79 (140)
+++ +||+++|. +++++++||+..... ...|. ..|++||||++|+|++.+.. .....++++++|+.|
T Consensus 96 ~~~~~~~~l~D~~~~~~~~~~gv~~~~~-~~~g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l 164 (165)
T 1q98_A 96 EGIENAKTVSTFRNHALHSQLGVDIQTG-PLAGL--TSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVL 164 (165)
T ss_dssp TTCTTEEEEECTTCTHHHHHTTCEECSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTT
T ss_pred cCCCceEEeeccccchHHHHhCceeccc-ccCCc--cceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhh
Confidence 678 79999998 899999999874321 01143 35999999999999999985 345667899988765
No 44
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.75 E-value=1.8e-08 Score=73.25 Aligned_cols=68 Identities=24% Similarity=0.333 Sum_probs=53.4
Q ss_pred CCC-ceeEEEc-CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC-CCCccHHHHHHHHHhh
Q psy1180 11 GDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA-STGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l-~FPLlsD-~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~-~~gr~~~EiLr~l~al 82 (140)
+++ +||+++| .++++ ++||+..... ...|. ..|++||||++|+|++.+..+. ....+.+++++.|++|
T Consensus 100 ~~~~~~~~l~D~~~~~~-~~~gv~~~~~-~~~g~--~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 100 FNIQNVTVASDFRYRDM-EKYGVLIGEG-ALKGI--LARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp TTCCSSEEEECTTTCGG-GGGTCBBCSS-TTTTS--BCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cCCCCeEEeecCccCcH-HHhCCEeccc-ccCCc--eeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 567 8999999 89999 9999975431 01143 3599999999999999998654 3456799999999875
No 45
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.73 E-value=4.6e-08 Score=70.43 Aligned_cols=67 Identities=9% Similarity=0.189 Sum_probs=54.4
Q ss_pred CCC-ceeEEEc-CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC-CCCccHHHHHHHHHhhH
Q psy1180 11 GDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA-STGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l-~FPLlsD-~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~-~~gr~~~EiLr~l~alq 83 (140)
+++ +||+++| .+++++++||+..... |+ ..|++||||++|+|++.+.... ....+++++++.|++|.
T Consensus 97 ~~~~~~~~~~d~~~~~~~~~~~v~~~~~----g~--~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 97 NGIDKVETLSDHRDMSFGEAFGVYIKEL----RL--LARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp SSCTTEEEEEGGGTCHHHHHTTCBBTTT----CS--BCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCCCceEeeCCchhHHHHHhCCccccC----Cc--eeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 677 8999999 8999999999875432 44 3599999999999999987653 34457899999998774
No 46
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.66 E-value=3.8e-08 Score=72.54 Aligned_cols=70 Identities=16% Similarity=0.165 Sum_probs=50.7
Q ss_pred CCCc--eeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFP--FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~--FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++ ||+|+|++++++++||+...... ..|...+.|++||| ++|+|+++++.+...++.+...-.+++.|
T Consensus 88 ~~~~~~fp~l~D~~~~~~~~~gv~~~~~~-~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 88 HGADDKVQMLADPGGAFTKAVDMELDLSA-VLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCSLAPNILSQL 159 (167)
T ss_dssp TTCTTTSEEEECTTSHHHHHTTCEECCHH-HHSSCEECCEEEEE-ETTEEEEEEECTTSSSSSTTSHHHHHHHH
T ss_pred cCCCcceEEEECCCCcHHHHcCCcccccc-ccCcccceEEEEEE-eCCEEEEEEecCCCCcceeccHHHHHHHh
Confidence 5677 99999999999999999753110 00222246999999 99999999999887766655444445444
No 47
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.64 E-value=9.8e-08 Score=69.95 Aligned_cols=68 Identities=10% Similarity=0.097 Sum_probs=50.2
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEc-cCCCCccHHHHHHHHHh
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY-PASTGRSVDEILRVLDS 81 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~-~~~~gr~~~EiLr~l~a 81 (140)
.++ +||+++|.+.+++++||+..... ...|. +.|++||||++|+|++.+.. ......+++++|+.+++
T Consensus 96 ~~~~~~~~l~D~~~~~~~~~gv~~~~~-~~~g~--~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~ 165 (175)
T 1xvq_A 96 EGTENVMPASAFRDSFGEDYGVTIADG-PMAGL--LARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGA 165 (175)
T ss_dssp ----CEEEEECTTSSHHHHTTCBBCSS-TTTTS--BCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred cCCCCceEeeCCHHHHHHHhCCccccc-ccCCc--ccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHh
Confidence 567 89999999999999999975421 11243 46999999999999999874 34455578888887763
No 48
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.53 E-value=6.9e-08 Score=69.23 Aligned_cols=65 Identities=22% Similarity=0.375 Sum_probs=47.6
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCC---CCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS---TGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~---~gr~~~EiLr~l~al 82 (140)
++++||+++|.+++++++||+..... .| ..|++||| ++|+|++.+..... ..+.++++++.++++
T Consensus 89 ~~~~~~~l~D~~~~~~~~~gv~~~p~---~g---~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~l 156 (159)
T 2a4v_A 89 QNLPYHLLSDPKREFIGLLGAKKTPL---SG---SIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKF 156 (159)
T ss_dssp HTCSSEEEECTTCHHHHHHTCBSSSS---SC---BCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCceEEECCccHHHHHhCCccccc---CC---ccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHHHh
Confidence 57899999999999999999974321 14 25899999 99999999864321 234455566666655
No 49
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.33 E-value=1.8e-06 Score=58.40 Aligned_cols=56 Identities=20% Similarity=0.169 Sum_probs=46.2
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+++ +||+++|.+.+++++||+. ++ +++||||++|+|++.+... .+.+++.+.|+++
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l 137 (138)
T 4evm_A 81 LDYKNLPVLVDPSGKLLETYGVR--------SY----PTQAFIDKEGKLVKTHPGF----MEKDAILQTLKEL 137 (138)
T ss_dssp CCCTTCCEEECTTCHHHHHTTCC--------SS----SEEEEECTTCCEEEEEESC----CCHHHHHHHHHHC
T ss_pred cCCCCeeEEECcchHHHHHcCcc--------cC----CeEEEECCCCcEEEeecCC----CcHHHHHHHHHhh
Confidence 445 9999999999999999985 43 8999999999999987643 4577888888765
No 50
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.33 E-value=4.4e-07 Score=67.96 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCCceeEEEc---CccHHHHHcCCCc--ccc---cccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGD---ENRDLAVKLDLLD--EEN---KNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD---~~~~va~~yGv~~--~~~---~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++|+++++ ...+++++||+.. +.. .....+. ..+++||||++|+|++.+..........++|.+.|+++
T Consensus 103 ~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~-~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 103 FHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVD-HSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSY 181 (200)
T ss_dssp SCTTCEEEECCHHHHHHHHHHTTC--------------CTT-TCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHC
T ss_pred cCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceee-ecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4578888874 4578999999862 210 0000011 24799999999999998765555555677778888877
Q ss_pred HhhhhCCCeeecCCCC
Q psy1180 83 QLFYKNNTVVTPANWK 98 (140)
Q Consensus 83 q~~~~~~~~~~PanW~ 98 (140)
+. .+++ ..|+++|-
T Consensus 182 ~~-~~~~-~~~~~~~~ 195 (200)
T 2b7k_A 182 VP-AEQR-AKQKEAWY 195 (200)
T ss_dssp CC-C------------
T ss_pred hh-hhhc-chhHHHHH
Confidence 65 4566 88999994
No 51
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.31 E-value=2.1e-06 Score=60.59 Aligned_cols=57 Identities=12% Similarity=0.024 Sum_probs=47.1
Q ss_pred CCCceeEEEcCcc-----HHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENR-----DLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~-----~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||++.|.++ ++++.||+. ++ +++||||++|+|++.+... .+.+++.+.|+.+-
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 90 YRIKFPVGVDQPGDGAMPRTMAAYQMR--------GT----PSLLLIDKAGDLRAHHFGD----VSELLLGAEIATLL 151 (158)
T ss_dssp TTCCSCEEEECCCSSSSCHHHHHTTCC--------SS----SEEEEECTTSEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred cCCCceEEEcCccchhhHHHHHHcCCC--------CC----CEEEEECCCCCEEEEEeCC----CCHHHHHHHHHHHh
Confidence 6789999999998 799999985 43 8999999999999988654 35677778887763
No 52
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.28 E-value=2.6e-06 Score=60.06 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=46.3
Q ss_pred CCCceeEEEcCccH------HHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRD------LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~------va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||++.|.+.. ++++||+. ++ +++||||++|+|++.+... .+.+++.+.|+.+
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~l 153 (160)
T 3lor_A 92 FGIKFPVAVDMPREGQRIPSTMKKYRLE--------GT----PSIILADRKGRIRQVQFGQ----VDDFVLGLLLGSL 153 (160)
T ss_dssp TTCCSCEEEECCCTTCSSCHHHHHTTCC--------SS----SEEEEECTTSBEEEEEESC----CCHHHHHHHHHHH
T ss_pred cCCCCcEEECCccccchhhhHHHhcccC--------cc----ceEEEECCCCcEEEEecCc----CCHHHHHHHHHHH
Confidence 67899999999998 99999985 43 8999999999999987654 3466777777765
No 53
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.26 E-value=2.4e-06 Score=59.92 Aligned_cols=63 Identities=10% Similarity=0.143 Sum_probs=48.2
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYK 87 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~ 87 (140)
++++||+++|.+.+++++||+. ++ +++||||++|+|++.+..... .+.+++.+.|++|....+
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l~~~~~ 146 (154)
T 3kcm_A 84 TGFTLPVLLDADKRVGKLYGTT--------GV----PETFVIDRHGVILKKVVGAME--WDHPEVIAFLNNELSKAR 146 (154)
T ss_dssp HCCCCCEEECTTCHHHHHHTCC--------SB----CEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTC-----
T ss_pred cCCCeeEEecCchHHHHHhCCC--------CC----CeEEEECCCCcEEEEEcCCCc--cccHHHHHHHHHHHHHhh
Confidence 5689999999999999999986 43 899999999999998765432 245788888888765544
No 54
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.25 E-value=3.1e-06 Score=59.40 Aligned_cols=57 Identities=14% Similarity=0.246 Sum_probs=47.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||++.|.+.+++++||+. ++ +++||||++|+|++.+... .+.+++.+.|+++.
T Consensus 81 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~G~----~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 81 YGVNFPVVLDTDRQVLDAYDVS--------PL----PTTFLINPEGKVVKVVTGT----MTESMIHDYMNLIK 137 (151)
T ss_dssp HTCCSCEEEETTSHHHHHTTCC--------SS----CEEEEECTTSEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred cCCCceEEECCchHHHHhcCCC--------CC----CeEEEECCCCcEEEEEeCC----CCHHHHHHHHHHHH
Confidence 5688999999999999999985 43 8999999999999987643 35778888888764
No 55
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.24 E-value=4.5e-06 Score=59.31 Aligned_cols=60 Identities=10% Similarity=0.205 Sum_probs=48.8
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQL 84 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~ 84 (140)
++++||+++|.+.+++++||+. + .+++||||++|+|++.+..... .+..++++.+++.+.
T Consensus 93 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~G~~~--~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 93 APVSFNFLSDATGQVQQRYGAN--------R----LPDTFIVDRKGIIRQRVTGGIE--WDAPKVVSYLKSLEG 152 (158)
T ss_dssp CCCSCEEEECTTSHHHHHTTCC--------S----SSEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTTC-
T ss_pred cCCCceEEECchHHHHHHhCCC--------C----cceEEEEcCCCCEEEEEeCCCc--cchHHHHHHHHhhcc
Confidence 6789999999999999999986 4 3899999999999999876533 346788888776653
No 56
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.23 E-value=5.2e-06 Score=58.02 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=48.7
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQL 84 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~ 84 (140)
++++||+++|.+.++++.||+. ++ +++||||++|+|++.+.... ..+.+++.+.|+++..
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 83 VPAEFTVAFDPKGQTPRLYGVK--------GM----PTSFLIDRNGKVLLQHVGFR--PADKEALEQQILAALG 142 (152)
T ss_dssp SCCCSEEEECTTCHHHHHTTCC--------SS----SEEEEECTTSBEEEEEESCC--TTTHHHHHHHHHHHTC
T ss_pred cCCCCceeECCcchhHHHcCCC--------CC----CeEEEECCCCCEEEEEccCC--CcCHHHHHHHHHHHHc
Confidence 5689999999999999999985 43 89999999999999886532 2356788888877643
No 57
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.22 E-value=4.9e-06 Score=57.38 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=46.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||++.|.+.++++.||+. ++ +++||||++|+|++..... .+.+++.+.|+.+
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 88 HDITQPIFVDSDHALTDAFENE--------YV----PAYYVFDKTGQLRHFQAGG----SGMKMLEKRVNRV 143 (148)
T ss_dssp TTCCSCEEECSSCHHHHHTCCC--------CS----SEEEEECTTCBEEEEEESC----STTHHHHHHHHHH
T ss_pred cCCCcceEECCchhHHHHhCCC--------CC----CEEEEECCCCcEEEEecCC----CCHHHHHHHHHHH
Confidence 5789999999999999999985 43 8999999999999987654 3567777777765
No 58
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=4e-06 Score=58.99 Aligned_cols=53 Identities=13% Similarity=0.298 Sum_probs=43.5
Q ss_pred CCCceeEEEcC---ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~---~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++|. +.+++++||+. + .|++||||++|+|++.+. +.+++.+.|+.+
T Consensus 91 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~l 146 (150)
T 3fw2_A 91 DTLDWEQVCDFGGLNSEVAKQYSIY--------K----IPANILLSSDGKILAKNL-------RGEELKKKIENI 146 (150)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCC--------S----SSEEEEECTTSBEEEESC-------CHHHHHHHHHHH
T ss_pred hCCCceEEEcCcccchHHHHHcCCC--------c----cCeEEEECCCCEEEEccC-------CHHHHHHHHHHH
Confidence 67899999999 78999999986 3 389999999999999863 456666666654
No 59
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.16 E-value=5.1e-06 Score=56.62 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=45.8
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++|.+.+++++||+. ++ +++||||++|+|+ .+..+ .-..+.+++.+.|+++
T Consensus 77 ~~~~~~~~~d~~~~~~~~~~i~--------~~----P~~~lid~~G~i~-~~~~~-~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 77 YNLNFTNLNDADGVIWARYNVP--------WQ----PAFVFYRADGTST-FVNNP-TAAMSQDELSGRVAAL 134 (136)
T ss_dssp HTCCSEEEECTTSHHHHHTTCC--------SS----SEEEEECTTSCEE-EECCS-SSCCCHHHHHHHHHHC
T ss_pred cCCCceEEECCchhHHHhcCCC--------CC----CEEEEECCCCcEE-EEEcC-CCccCHHHHHHHHHHH
Confidence 5689999999999999999975 43 8999999999999 65421 1224678888888764
No 60
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.13 E-value=5.9e-06 Score=56.77 Aligned_cols=53 Identities=9% Similarity=0.327 Sum_probs=43.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVL 79 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l 79 (140)
++++||++.|.+.++++.||+. + .+++||||++|+|++.+... .+.+++.+.|
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l 144 (145)
T 3erw_A 92 NKLTFPIVLDSKGELMKEYHII--------T----IPTSFLLNEKGEIEKTKIGP----MTAEQLKEWT 144 (145)
T ss_dssp TTCCSCEEECSSSHHHHHTTCC--------E----ESEEEEECTTCCEEEEEESC----CCHHHHHHHH
T ss_pred cCCceeEEEcCchhHHHhcCcC--------c----cCeEEEEcCCCcEEEEEcCC----cCHHHHHHhh
Confidence 6789999999999999999975 3 38999999999999987654 3456666554
No 61
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.13 E-value=4e-06 Score=61.28 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=37.5
Q ss_pred CCCcee-EEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC
Q psy1180 11 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 11 ~~l~FP-LlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~ 66 (140)
++++|+ +++|.+.+++++||+. + .|++||||++|+|++.+....
T Consensus 109 ~~~~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~~ 153 (176)
T 3kh7_A 109 LHNPYLLSISDADGTLGLDLGVY--------G----APETYLIDKQGIIRHKIVGVV 153 (176)
T ss_dssp TTCCCSEEEEETTCHHHHHHTCC--------S----SCEEEEECTTCBEEEEEESCC
T ss_pred cCCCCceEEECCcchHHHHcCCC--------C----CCeEEEECCCCeEEEEEcCCC
Confidence 567888 5899999999999986 4 389999999999999886653
No 62
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.10 E-value=5.5e-06 Score=60.25 Aligned_cols=63 Identities=11% Similarity=0.235 Sum_probs=48.9
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
+++ .||+++|.++++++.||+..... + .+++||||++|+|++.+.... ..+.+++++.|+++.
T Consensus 116 ~~~~~~~~~~d~~~~~~~~~~~~~~~~----~----~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 116 ANLTRLGYFNDQKAKVFQDLKAIGRAL----G----MPTSVLVDPQGCEIATIAGPA--EWASEDALKLIRAAT 179 (186)
T ss_dssp TTCCTTCCEECTTCHHHHHHHTTTCCS----S----SSEEEEECTTSBEEEEEESCC--CTTSHHHHHHHHHHH
T ss_pred cCCCCCceEECCcchHHHHhccccccC----C----CCEEEEECCCCCEEEEEecCC--ccCHHHHHHHHHHHh
Confidence 456 59999999999999999863321 3 489999999999999876542 234678888888764
No 63
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.10 E-value=6.1e-06 Score=59.04 Aligned_cols=70 Identities=16% Similarity=0.251 Sum_probs=48.6
Q ss_pred CCCce---eEEEcCccHHHHHcCC-----CcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPF---AIIGDENRDLAVKLDL-----LDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~F---PLlsD~~~~va~~yGv-----~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++| |+++|.+.+++++|++ .........++ .+.+++||||++|+|++.+..... .+.+++++.|++|
T Consensus 94 ~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l 170 (174)
T 1xzo_A 94 YPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQV-IHQSSFYLVGPDGKVLKDYNGVEN--TPYDDIISDVKSA 170 (174)
T ss_dssp SCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSC-CSCCEEEEECTTSEEEEEEESSSS--CCHHHHHHHHHHH
T ss_pred cCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCee-eeeeEEEEECCCCeEEEEEcCCCC--CCHHHHHHHHHHH
Confidence 56788 9999999999888764 11110000122 135789999999999999875432 3578999988876
Q ss_pred H
Q psy1180 83 Q 83 (140)
Q Consensus 83 q 83 (140)
.
T Consensus 171 l 171 (174)
T 1xzo_A 171 S 171 (174)
T ss_dssp T
T ss_pred H
Confidence 3
No 64
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.09 E-value=8.1e-06 Score=57.07 Aligned_cols=57 Identities=12% Similarity=0.223 Sum_probs=47.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||++.|.+.++++.||+. ++ +++||||++|+|+..+... .+.+++++.|+.+-
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~i~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 84 YGLPFTVMYDADKAVGQAFGTQ--------VY----PTSVLIGKKGEILKTYVGE----PDFGKLYQEIDTAW 140 (153)
T ss_dssp TTCCSEEEECSSCHHHHHHTCC--------SS----SEEEEECSSSCCCEEEESS----CCHHHHHHHHHHHH
T ss_pred cCCCceEEcCchHHHHHHcCCC--------cc----CeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHH
Confidence 5788999999999999999985 43 8999999999999887543 46788888888764
No 65
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.08 E-value=6.5e-06 Score=59.84 Aligned_cols=59 Identities=12% Similarity=0.122 Sum_probs=47.4
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||++.|.++++++.||.+.-. + .+++||||++|+|++.+... .+.+++.+.|+.+
T Consensus 121 ~~~~~~~~~d~~~~~~~~~~~~~v~-----~----~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l 179 (183)
T 3lwa_A 121 NGLDYPSIYDPPFMTAASLGGVPAS-----V----IPTTIVLDKQHRPAAVFLRE----VTSKDVLDVALPL 179 (183)
T ss_dssp TTCCSCEEECTTCGGGGGTTTCCTT-----C----CSEEEEECTTSCEEEEECSC----CCHHHHHHHHHHH
T ss_pred cCCCccEEECCcchHHHHhccCCCC-----C----CCeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 6789999999999999999854221 2 48999999999999987644 3577888888765
No 66
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.06 E-value=5.9e-06 Score=58.16 Aligned_cols=63 Identities=6% Similarity=0.007 Sum_probs=46.1
Q ss_pred CCCceeEEEcCc---cHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhh
Q psy1180 11 GDFPFAIIGDEN---RDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYK 87 (140)
Q Consensus 11 ~~l~FPLlsD~~---~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~ 87 (140)
++++||++.|.+ .+++++||.... + .+++||||++|+|++.+... .+.+++.+.|+.+....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~v~------~----~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 78 TPVSYPIWRYTGANSRNFMKTYGNTVG------V----LPFTVVEAPKCGYRQTITGE----VNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp SCCSSCEEEECCSCHHHHHHTTTCCSC------C----SSEEEEEETTTTEEEECCSC----CCHHHHHHHHHHHHTC--
T ss_pred cCCCCceEecCccchHHHHHHhCCccC------C----CCEEEEECCCCcEEEEECCC----CCHHHHHHHHHHHHHHhh
Confidence 678999999874 578888883111 3 38999999999999886543 357788888888765443
No 67
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.03 E-value=1.3e-05 Score=55.38 Aligned_cols=54 Identities=11% Similarity=0.252 Sum_probs=43.0
Q ss_pred CCCceeEEEcCccHHHH--HcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDENRDLAV--KLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~--~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||++.|.++.++. .||+. + .+++||||++|+|++. +.+.+++.+.|+.++
T Consensus 85 ~~~~~~~~~d~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~-------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 85 MPQGWIVGWNKAGDIRTRQLYDIR--------A----TPTIYLLDGRKRVILK-------DTSMEQLIDYLATQA 140 (142)
T ss_dssp SCTTCEEEECTTCHHHHTTCSCCC--------S----SSEEEEECTTCBEEEC-------SCCHHHHHHHHHC--
T ss_pred cCCCcceeeCCccchhhHHHcCCC--------C----CCeEEEECCCCCEEec-------CCCHHHHHHHHHHHc
Confidence 67899999999999987 88875 4 3899999999999872 245778888887654
No 68
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.03 E-value=2.3e-05 Score=52.97 Aligned_cols=55 Identities=16% Similarity=0.246 Sum_probs=44.1
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+++ +||++.|.+.++++.||+. ++ +++||||++|+|+ .+... .+.+++.+.|+++
T Consensus 78 ~~~~~~~~~~d~~~~~~~~~~i~--------~~----P~~~~id~~g~i~-~~~g~----~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 78 YPVKTFTQLADTDGSVWANFGVT--------QQ----PAYAFVDPHGNVD-VVRGR----MSQDELTRRVTAL 133 (136)
T ss_dssp TTCTTSEEEECTTCHHHHHTTCC--------SS----SEEEEECTTCCEE-EEESC----CCHHHHHHHHHHH
T ss_pred cCCCceEEEEcCCcHHHHHcCCC--------CC----ceEEEECCCCCEE-EEecC----CCHHHHHHHHHHH
Confidence 456 8999999999999999975 43 8999999999998 65443 3567787777764
No 69
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.02 E-value=1.1e-05 Score=57.06 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=47.7
Q ss_pred CCCceeEEE---cCccHHHHHcCCCccc-ccccCc-c-ceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHh
Q psy1180 11 GDFPFAIIG---DENRDLAVKLDLLDEE-NKNNLE-T-AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQL 84 (140)
Q Consensus 11 ~~l~FPLls---D~~~~va~~yGv~~~~-~~~~~G-~-~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~ 84 (140)
++++||++. |...+++++||+.... .....+ . -...+++||||++|+|++.+... .+.+++++.|+++-.
T Consensus 86 ~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 86 FSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN----KRKGEIAASIATHMR 161 (164)
T ss_dssp TCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT----CCHHHHHHHHHHHHG
T ss_pred cCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC----CCHHHHHHHHHHHHH
Confidence 568899994 6678899999986321 000000 0 01235899999999999987543 356888888887653
No 70
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.98 E-value=1.9e-05 Score=65.03 Aligned_cols=72 Identities=14% Similarity=0.000 Sum_probs=56.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
++++||++.|.+.+++++||+. + .+++||||++|+|++.+... .+.+++.+.|+.+......+
T Consensus 142 ~~l~fpv~~D~~~~l~~~ygV~--------~----~Pt~~lID~~G~Iv~~~~G~----~~~~~l~~~I~~lL~e~~~~- 204 (352)
T 2hyx_A 142 LGISYPIALDNNYATWTNYRNR--------Y----WPAEYLIDATGTVRHIKFGE----GDYNVTETLVRQLLNDAKPG- 204 (352)
T ss_dssp HTCCSCEEECTTSHHHHHTTCC--------E----ESEEEEECTTSBEEEEEESB----CCHHHHHHHHHHHHHHHSTT-
T ss_pred cCCCccEEeCCcHHHHHHcCCC--------c----cCEEEEEeCCCeEEEEEcCC----CCHHHHHHHHHHHHhhccCC-
Confidence 5789999999999999999985 3 38999999999999987654 35778888888765444333
Q ss_pred eeecCCCCC
Q psy1180 91 VVTPANWKP 99 (140)
Q Consensus 91 ~~~PanW~~ 99 (140)
...|+....
T Consensus 205 ~~lpap~~~ 213 (352)
T 2hyx_A 205 VKLPQPSST 213 (352)
T ss_dssp CCCCSCGGG
T ss_pred CCCCCCccc
Confidence 667776543
No 71
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.98 E-value=1.6e-05 Score=54.85 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=44.0
Q ss_pred CCCceeEEEcC---ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~---~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++|. +.+++++||+. ++ +++||||++|+|++... +.+++.+.|+.+
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~-------~~~~l~~~l~~l 144 (148)
T 3fkf_A 89 DTLSWDQVCDFTGLSSETAKQYAIL--------TL----PTNILLSPTGKILARDI-------QGEALTGKLKEL 144 (148)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCC--------SS----SEEEEECTTSBEEEESC-------CHHHHHHHHHHH
T ss_pred cCCCceEEEccCCcchHHHHhcCCC--------Cc----CEEEEECCCCeEEEecC-------CHHHHHHHHHHH
Confidence 67899999999 78999999986 43 89999999999998754 567777777665
No 72
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.97 E-value=2.5e-05 Score=55.13 Aligned_cols=55 Identities=15% Similarity=0.292 Sum_probs=45.4
Q ss_pred CCc-eeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFP-FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~-FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+++ ||++.|.+.+++++||+. ++ +++||||++|+|++.+... .+.+++.+.|+.+
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNIS--------VY----PSWALIGKDGDVQRIVKGS----INEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTCC--------SS----SEEEEECTTSCEEEEEESC----CCHHHHHHHHHCT
T ss_pred CCCcceEEEcCchHHHHHcCCC--------cc----ceEEEECCCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 566 899999999999999985 43 8999999999999987543 3577888888765
No 73
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.96 E-value=3.8e-05 Score=54.65 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=49.9
Q ss_pred CCCceeEEEcCc---cHHHHHcCCCccc-cccc-Ccc-ceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHh
Q psy1180 11 GDFPFAIIGDEN---RDLAVKLDLLDEE-NKNN-LET-AITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQL 84 (140)
Q Consensus 11 ~~l~FPLlsD~~---~~va~~yGv~~~~-~~~~-~G~-~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~ 84 (140)
++++|++++|.. .+++++||+.... .... .+. ....|++||||++|+|++.+... .+.+++++.|+++..
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 89 FHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS----RSAEQISDSVRRHMA 164 (171)
T ss_dssp TCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS----CCHHHHHHHHHHHHH
T ss_pred cCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC----CCHHHHHHHHHHHHH
Confidence 568899999753 5899999987322 1000 000 11346999999999999987644 357888888888765
Q ss_pred hhh
Q psy1180 85 FYK 87 (140)
Q Consensus 85 ~~~ 87 (140)
..+
T Consensus 165 ~~~ 167 (171)
T 2rli_A 165 AFR 167 (171)
T ss_dssp HHC
T ss_pred HHH
Confidence 443
No 74
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.94 E-value=1.4e-05 Score=56.18 Aligned_cols=54 Identities=7% Similarity=0.172 Sum_probs=42.5
Q ss_pred CCCceeEEEcC---ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD~---~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||+++|. +.+++++||+. + .+++||||++|+|++.+. +.+++.+.|++|.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~~l~ 140 (152)
T 2lrn_A 84 DKSYWNQVLLQKDDVKDVLESYCIV--------G----FPHIILVDPEGKIVAKEL-------RGDDLYNTVEKFV 140 (152)
T ss_dssp HTCCSEEEEECHHHHHHHHHHTTCC--------S----SCEEEEECTTSEEEEECC-------CTTHHHHHHHHHH
T ss_pred hCCCCeEEecccchhHHHHHHhCCC--------c----CCeEEEECCCCeEEEeeC-------CHHHHHHHHHHHH
Confidence 46899999999 79999999986 4 389999999999999863 2245666666553
No 75
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.94 E-value=1.7e-05 Score=54.74 Aligned_cols=55 Identities=9% Similarity=0.272 Sum_probs=43.1
Q ss_pred CCCc-eeEEEcCccH--HHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 11 GDFP-FAIIGDENRD--LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 11 ~~l~-FPLlsD~~~~--va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
++++ ||++.|.++. +++.||+. + .+++||||++|+|++.+... .+++++++.+.+
T Consensus 86 ~~~~~~~~~~d~~~~~~~~~~~~i~--------~----~P~~~lid~~G~i~~~~~g~----~~~~~~l~~l~~ 143 (148)
T 3hcz_A 86 KKIGGWLNVRDSKNHTDFKITYDIY--------A----TPVLYVLDKNKVIIAKRIGY----ENLDDFLVQYEK 143 (148)
T ss_dssp HTCTTSEEEECTTCCCCHHHHHCCC--------S----SCEEEEECTTCBEEEESCCG----GGHHHHHHHHHH
T ss_pred cCCCCceEEeccccchhHHHhcCcC--------C----CCEEEEECCCCcEEEecCCH----HHHHHHHHHHHH
Confidence 4556 9999999988 99999985 4 38999999999999876433 456777666654
No 76
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.94 E-value=8.4e-06 Score=57.17 Aligned_cols=57 Identities=9% Similarity=0.112 Sum_probs=47.1
Q ss_pred CCCceeEEEc---CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDFPFAIIGD---ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l~FPLlsD---~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++++||+++| .+.+++++||+. + .+++||||++|+|++.+... .+.+++.+.|+.+.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 84 YPRFIPLLASDRDRPHEVAARFKVL--------G----QPWTFVVDREGKVVALFAGR----AGREALLDALLLAG 143 (154)
T ss_dssp CTTEEECBCCSSCCHHHHHTTSSBC--------S----SCEEEEECTTSEEEEEEESB----CCHHHHHHHHHHTT
T ss_pred cCCCcccccccccchHHHHHHhCCC--------c----ccEEEEECCCCCEEEEEcCC----CCHHHHHHHHHhcc
Confidence 6789999999 789999999975 3 38999999999999987643 35788888887764
No 77
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.91 E-value=3e-05 Score=54.13 Aligned_cols=56 Identities=18% Similarity=0.297 Sum_probs=43.9
Q ss_pred CCCcee-EEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FP-LlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++|| ++.|.+.+++++||+. ++ +++||||++|+|++.+... .+.+++.+.|+.+
T Consensus 94 ~~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~~id~~G~i~~~~~g~----~~~~~l~~~l~~~ 150 (156)
T 1kng_A 94 YGNPFGRVGVDANGRASIEWGVY--------GV----PETFVVGREGTIVYKLVGP----ITPDNLRSVLLPQ 150 (156)
T ss_dssp HCCCCSEEEEETTSHHHHHTTCC--------SS----CEEEEECTTSBEEEEEESC----CCHHHHHHTHHHH
T ss_pred cCCCCceeeeCchhHHHHhcCcC--------cc----CeEEEEcCCCCEEEEEeCC----CCHHHHHHHHHHH
Confidence 568899 9999999999999976 43 8999999999999987543 2456666666544
No 78
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.87 E-value=9.2e-06 Score=57.83 Aligned_cols=68 Identities=12% Similarity=0.201 Sum_probs=49.1
Q ss_pred CCCceeEEEcCc---cHHHHHcCCCccccc----ccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDEN---RDLAVKLDLLDEENK----NNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~---~~va~~yGv~~~~~~----~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++|.+ .+++++||+...... ...++. ..+++|||| +|+|++.+.... ..+.+++++.|++|
T Consensus 97 ~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~-~~P~~~lid-~G~i~~~~~g~~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 97 FHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVD-HTATTFVVK-EGRLVLLYSPDK--AEATDRVVADLQAL 171 (172)
T ss_dssp HCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEE-ECCCEEEEE-TTEEEEEECHHH--HTCHHHHHHHHHHC
T ss_pred hCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEe-cCCEEEEEE-CCEEEEEECCCC--CCCHHHHHHHHHHh
Confidence 568999999998 799999999754221 000121 358999999 999999876542 22678888888764
No 79
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.87 E-value=1.7e-05 Score=56.61 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=36.5
Q ss_pred CCCcee-EEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEcc
Q psy1180 11 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 11 ~~l~FP-LlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~ 65 (140)
++++|| ++.|.+.++++.||+. ++ |++||||++|+|++.+...
T Consensus 102 ~~~~~~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g~ 145 (168)
T 2b1k_A 102 LGNPYALSLFDGDGMLGLDLGVY--------GA----PETFLIDGNGIIRYRHAGD 145 (168)
T ss_dssp HCCCCSEEEEETTCHHHHHHTCC--------SS----SEEEEECTTSBEEEEEESC
T ss_pred cCCCCceeeECcchHHHHHcCcc--------cc----CEEEEECCCCeEEEEEeCC
Confidence 467888 6899999999999986 43 8999999999999987654
No 80
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.84 E-value=2.5e-05 Score=55.41 Aligned_cols=53 Identities=15% Similarity=0.340 Sum_probs=41.4
Q ss_pred CCCceeEEEcCccH---HHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHH
Q psy1180 11 GDFPFAIIGDENRD---LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVL 79 (140)
Q Consensus 11 ~~l~FPLlsD~~~~---va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l 79 (140)
.+++||+++|.+++ ++++||+. + .|++||||++|+|++.+.. ..+.++.+..+
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~g----~~~~e~~~~~~ 143 (152)
T 2lrt_A 88 DNLPWVCVRDANGAYSSYISLYNVT--------N----LPSVFLVNRNNELSARGEN----IKDLDEAIKKL 143 (152)
T ss_dssp TTCSSEEEECSSGGGCHHHHHHTCC--------S----CSEEEEEETTTEEEEETTT----CSCHHHHHHHH
T ss_pred hCCCceEEECCCCcchHHHHHcCcc--------c----CceEEEECCCCeEEEecCC----HHHHHHHHHHH
Confidence 35899999999987 99999986 3 3899999999999987543 24566665444
No 81
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=2.7e-06 Score=60.27 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=43.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLF 85 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~ 85 (140)
++++||+++|.+.+++++||+... | .+++||||++|+|++.+.. .+.+++.+.|++++..
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~~~~~------~----~P~~~lid~~G~i~~~~~g-----~~~~~l~~~l~~l~~~ 149 (159)
T 2ls5_A 90 TGVTYPLGLDPGADIFAKYALRDA------G----ITRNVLIDREGKIVKLTRL-----YNEEEFASLVQQINEM 149 (159)
Confidence 678999999999999999997421 3 3789999999999987643 2333444455544433
No 82
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.74 E-value=5.7e-05 Score=53.64 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=42.7
Q ss_pred CCC-ceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 11 GDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 11 ~~l-~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
+++ +||++.| +.+++++||+. ++ +++||||++|+|++ .... .+.+++.+.|+++.
T Consensus 108 ~~~~~~~~~~d-~~~~~~~~~v~--------~~----P~~~lid~~G~i~~--~g~~---~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 108 YGDPSWIMVMD-DGSLVEKFNVR--------SI----DYIVIMDKSSNVLY--AGTT---PSLGELESVIKSVQ 163 (165)
T ss_dssp HSCTTSEEEEC-CSHHHHHTTCC--------SS----SEEEEEETTCCEEE--EEES---CCHHHHHHHHHHC-
T ss_pred cCCCCeeEEeC-hHHHHHHhCCC--------Cc----eEEEEEcCCCcEEE--eCCC---CCHHHHHHHHHHHh
Confidence 356 9999999 99999999976 43 89999999999999 2221 15677777777653
No 83
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.70 E-value=8.7e-05 Score=52.18 Aligned_cols=61 Identities=13% Similarity=0.207 Sum_probs=45.5
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||++.|.+ ++++.|+..... |+. ..+++||||++|+|++.+... .+.+++.+.|+.+
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~~~~~~-----~i~-~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~~ 149 (165)
T 3or5_A 89 QGIIYPVMMATP-ELIRAFNGYIDG-----GIT-GIPTSFVIDASGNVSGVIVGP----RSKADFDRIVKMA 149 (165)
T ss_dssp HTCCSCEEECCH-HHHHHHHTTSTT-----CSC-SSSEEEEECTTSBEEEEECSC----CCHHHHHHHHHHH
T ss_pred cCCCCceEecCH-HHHHHHhhhhcc-----CCC-CCCeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 578999999976 999999765432 211 248999999999999876544 3567777777765
No 84
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.58 E-value=9.8e-05 Score=53.63 Aligned_cols=59 Identities=14% Similarity=0.008 Sum_probs=41.9
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhh
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLF 85 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~ 85 (140)
...+++++||+...... .++. ..+++||||++|+|+.++... ..+.+++++.|++++..
T Consensus 105 ~~~~~~~~~g~~~~~~~--~~~~-~~~~~~lID~~G~i~~~~~g~---~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAG--NDFI-HPNVVVVLSPELQIKDYIYGV---NYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHHHHTTCCCEEET--TEEE-CCCEEEEECTTSBEEEEEESS---SCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCeEEecCC--Cccc-cCceEEEECCCCeEEEEEeCC---CCCHHHHHHHHHHhhcc
Confidence 45799999997643210 1221 358899999999999987432 35689999999887643
No 85
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.58 E-value=8.7e-05 Score=57.18 Aligned_cols=63 Identities=8% Similarity=0.025 Sum_probs=45.3
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCC---CC-ccHHHHHH
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS---TG-RSVDEILR 77 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~---~g-r~~~EiLr 77 (140)
....+++|+|.+++++++|||..... .|.....|.++||| ||+|++.++.+.+ .. -+.+.+|+
T Consensus 131 ~~~~i~~laD~~~eftkalGl~~~~~---~gg~RS~Rya~IVd-DGvV~~~~vE~~pg~~~~vS~ae~vL~ 197 (199)
T 4h86_A 131 DTTHIKFASDPGCAFTKSIGFELAVG---DGVYWSGRWAMVVE-NGIVTYAAKETNPGTDVTVSSVESVLA 197 (199)
T ss_dssp CCSSEEEEECGGGHHHHHTTCEEEEE---TTEEEECSEEEEEE-TTEEEEEEECSSTTTCCSTTSHHHHHT
T ss_pred ccccccccCCcchHHHHhcCceeecC---CCcceeeEEEEEEE-CCEEEEEEEeCCCCCCCcccCHHHHHh
Confidence 34679999999999999999865432 12222569999999 9999999987642 12 24566654
No 86
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.54 E-value=9.3e-05 Score=51.47 Aligned_cols=55 Identities=9% Similarity=0.018 Sum_probs=42.7
Q ss_pred eeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhh
Q psy1180 15 FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLF 85 (140)
Q Consensus 15 FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~ 85 (140)
++++.|.+.+++++||+. ++ +++||||++|+|++.... ..+.+++.+.|+.+...
T Consensus 90 ~~~~~d~~~~~~~~~~v~--------~~----P~~~lid~~G~i~~~~~g----~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 90 IQLHMGTDRTFMDAYLIN--------GI----PRFILLDRDGKIISANMT----RPSDPKTAEKFNELLGL 144 (152)
T ss_dssp EEEECSSCTHHHHHTTCC--------SS----CCEEEECTTSCEEESSCC----CTTCHHHHHHHHHHHTC
T ss_pred ceeecCcchhHHHHcCcC--------CC----CEEEEECCCCeEEEccCC----CCCHHHHHHHHHHHhcc
Confidence 588899999999999975 43 789999999999986432 23567888888876543
No 87
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.52 E-value=5.8e-05 Score=52.48 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=38.6
Q ss_pred CCCce-eEEEcCc---cHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHH
Q psy1180 11 GDFPF-AIIGDEN---RDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLD 80 (140)
Q Consensus 11 ~~l~F-PLlsD~~---~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~ 80 (140)
++++| ++++|.+ .+++++||+. + .+++||||++|+|++... +.+++.+.|+
T Consensus 87 ~~~~~~~~~~d~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~ 141 (143)
T 4fo5_A 87 DKLDLSTQFHEGLGKESELYKKYDLR--------K----GFKNFLINDEGVIIAANV-------TPEKLTEILK 141 (143)
T ss_dssp HTCCGGGEEECTTGGGSHHHHHTTGG--------G----CCCEEEECTTSBEEEESC-------CHHHHHHHHT
T ss_pred hCCCCceeeecccccchHHHHHcCCC--------C----CCcEEEECCCCEEEEccC-------CHHHHHHHHH
Confidence 56788 8999984 6899999975 3 389999999999998753 2355555554
No 88
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.39 E-value=0.00035 Score=48.32 Aligned_cols=51 Identities=12% Similarity=0.110 Sum_probs=39.4
Q ss_pred CCCceeEEEcCccH--HHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHH
Q psy1180 11 GDFPFAIIGDENRD--LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLD 80 (140)
Q Consensus 11 ~~l~FPLlsD~~~~--va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~ 80 (140)
++++||.+.|.+.. +++.||+. + .|++||||++|+|++... ..+++.+.|+
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~-------~~~~l~~~l~ 141 (142)
T 3eur_A 89 FAKEWTNGYDKELVIKNKNLYDLR--------A----IPTLYLLDKNKTVLLKDA-------TLQKVEQYLA 141 (142)
T ss_dssp SCTTSEEEECTTCHHHHTTCSCCT--------T----CSEEEEECTTCBEEEEEE-------CHHHHHHHHH
T ss_pred cccccccccCccchhhhhhhcCCC--------c----CCeEEEECCCCcEEecCC-------CHHHHHHHHh
Confidence 56789999998876 78888875 4 389999999999998864 2466665554
No 89
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.39 E-value=2.9e-05 Score=55.93 Aligned_cols=68 Identities=9% Similarity=0.064 Sum_probs=37.4
Q ss_pred CCCceeEEEcCc--cH-HHHHcCCCcccccccCccc--eeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIGDEN--RD-LAVKLDLLDEENKNNLETA--ITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLlsD~~--~~-va~~yGv~~~~~~~~~G~~--~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++|.+ ++ +++.|+++.....+..|++ .-.|++||||++|+|++.+.... +.+++.+.|++|
T Consensus 94 ~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 166 (171)
T 3cmi_A 94 YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLT----KPSSLSETIEEL 166 (171)
T ss_dssp -CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTS----CGGGGHHHHHHH
T ss_pred cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCC----CHHHHHHHHHHH
Confidence 578999999754 33 3333332211100001220 00249999999999999875432 345666666654
No 90
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.12 E-value=0.00031 Score=51.51 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=38.2
Q ss_pred CCCceeEEE--cCccHHHH-HcCCCcccccccCccceeee---EEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIG--DENRDLAV-KLDLLDEENKNNLETAITVR---AVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLls--D~~~~va~-~yGv~~~~~~~~~G~~~~~R---atFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++ |.++..+. .|+.+........|+. ..+ ++||||++|+|++.+... .+.+++.+.|+++
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~-~iP~~~~~~liD~~G~i~~~~~g~----~~~~~l~~~i~~l 181 (187)
T 3dwv_A 109 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATK-AIKWNFTSFLIDRDGVPVERFSPG----ASVKDIEEKLIPL 181 (187)
T ss_dssp CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSS-SCCSTTCEEEECTTSCEEEEECTT----CCHHHHHHHHHHH
T ss_pred cCCCCceeeccccCCcchhHHHHHHHhhcCCccCCC-ccccceeEEEECCCCCEEEEECCC----CCHHHHHHHHHHH
Confidence 488999997 55555432 2211111000001321 246 999999999999987533 2456677777654
No 91
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=97.04 E-value=0.00027 Score=49.92 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=36.5
Q ss_pred CCCceeEE--EcCccHHHH-Hc--------CCCcccccccCccceeee---EEEEECCCCcEEEEEEccCCCCccHHHHH
Q psy1180 11 GDFPFAII--GDENRDLAV-KL--------DLLDEENKNNLETAITVR---AVYIIGPDRKLKLSIVYPASTGRSVDEIL 76 (140)
Q Consensus 11 ~~l~FPLl--sD~~~~va~-~y--------Gv~~~~~~~~~G~~~~~R---atFIIDpdG~Ir~~~~~~~~~gr~~~EiL 76 (140)
++++||++ .|.++.+++ .| |++. .+ .+ ++||||++|+|++.+... .+.+++.
T Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~------~~----~p~~~~~~lid~~G~i~~~~~g~----~~~~~l~ 160 (170)
T 2p5q_A 95 FKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG------DD----IQWNFAKFLVNKDGQVVDRYYPT----TSPLSLE 160 (170)
T ss_dssp TCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC------SC----CCSTTCEEEECTTSCEEEEECTT----SCGGGGH
T ss_pred cCCCceeEeeeccCCCchHHHHHHHHhcCCCccC------Cc----ccccccEEEECCCCCEEEeeCCC----CCHHHHH
Confidence 46788888 576665432 22 3321 02 35 899999999999987543 2345666
Q ss_pred HHHHhh
Q psy1180 77 RVLDSL 82 (140)
Q Consensus 77 r~l~al 82 (140)
+.|+++
T Consensus 161 ~~i~~l 166 (170)
T 2p5q_A 161 RDIKQL 166 (170)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 92
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.00 E-value=0.00031 Score=51.53 Aligned_cols=31 Identities=23% Similarity=0.174 Sum_probs=23.7
Q ss_pred EEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 48 AVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 48 atFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++||||++|+|++.+... .+.+++.+.|+++
T Consensus 153 ~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~l 183 (190)
T 2vup_A 153 TSFLIDRDGVPVERFSPG----ASVKDIEKKLIPL 183 (190)
T ss_dssp CEEEECTTSCEEEEECTT----CCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEECCC----CCHHHHHHHHHHH
Confidence 899999999999987543 2456777777665
No 93
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=96.93 E-value=0.00058 Score=48.16 Aligned_cols=68 Identities=12% Similarity=0.061 Sum_probs=38.0
Q ss_pred CCCceeEEE--cCccHHHH-HcCCCcccccccCccce-eeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIG--DENRDLAV-KLDLLDEENKNNLETAI-TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLls--D~~~~va~-~yGv~~~~~~~~~G~~~-~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++ |.++.+++ .|+.+.....+..|... ..+++||||++|+|++.+.... +.+++.+.|+++
T Consensus 94 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~l 165 (169)
T 2v1m_A 94 YGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTT----APYDIEGDIMEL 165 (169)
T ss_dssp HCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTS----CGGGGHHHHHHH
T ss_pred cCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCC----CHHHHHHHHHHH
Confidence 578899997 77666543 33211110000001100 1368999999999999875432 345566666554
No 94
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.87 E-value=0.00037 Score=53.32 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=25.3
Q ss_pred eEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|++||||++|+|++.+... -+.+++.+.|++|-
T Consensus 178 pttfLID~~G~vv~~~~g~----~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHR----ATVSSVKTDILAYL 210 (215)
T ss_dssp TCEEEECTTSCEEEEECTT----SCHHHHHHHHHHHG
T ss_pred ceEEEECCCCeEEEEeCCC----CCHHHHHHHHHHHH
Confidence 7899999999999987543 23567777777664
No 95
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.86 E-value=0.00046 Score=52.31 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=23.7
Q ss_pred eEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|++||||++|+|++.+.... +.+++.+.|++|
T Consensus 160 ~ttflID~~G~i~~~~~g~~----~~~~l~~~I~~l 191 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHRT----TVSNVKMDILSY 191 (207)
T ss_dssp TCEEEECTTSCEEEEECTTS----CHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCCC----CHHHHHHHHHHH
Confidence 78999999999999875432 345666666654
No 96
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=96.86 E-value=0.00037 Score=50.92 Aligned_cols=67 Identities=16% Similarity=0.008 Sum_probs=36.7
Q ss_pred CCCceeEEE--cCccHHHH-HcCCCccccc--ccCccce-eeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 11 GDFPFAIIG--DENRDLAV-KLDLLDEENK--NNLETAI-TVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 11 ~~l~FPLls--D~~~~va~-~yGv~~~~~~--~~~G~~~-~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
++++||+++ |.+++.++ .|+.+..... +..|... ..+++||||++|+|++.+.... +.+++.+.|++
T Consensus 111 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~ 183 (185)
T 2gs3_A 111 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME----EPLVIEKDLPH 183 (185)
T ss_dssp TTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTS----CGGGGGGGHHH
T ss_pred cCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCC----CHHHHHHHHHH
Confidence 678899997 55555443 4432211100 0001100 1369999999999999975432 23455555544
No 97
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=96.85 E-value=0.00035 Score=50.81 Aligned_cols=68 Identities=15% Similarity=-0.020 Sum_probs=38.9
Q ss_pred CCCceeEEE--cCccHHHH-HcCCCccccc--ccCccc-eeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 11 GDFPFAIIG--DENRDLAV-KLDLLDEENK--NNLETA-ITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 11 ~~l~FPLls--D~~~~va~-~yGv~~~~~~--~~~G~~-~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++++||+++ |.+++.++ .|+.+..... +..|.. ...+++||||++|+|++.+... .+.+++.+.|++|
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~l 182 (183)
T 2obi_A 109 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPM----EEPLVIEKDLPHY 182 (183)
T ss_dssp TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTT----SCTHHHHTTSGGG
T ss_pred cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCC----CCHHHHHHHHHHh
Confidence 678999998 77766543 3422211000 000100 0137999999999999987543 2346666655543
No 98
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=95.77 E-value=0.00023 Score=48.78 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=34.1
Q ss_pred eeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHH
Q psy1180 15 FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDE 74 (140)
Q Consensus 15 FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~E 74 (140)
+|+..|.+.+++++||+. + .+++||||++|+|++........+++.++
T Consensus 90 ~~~~~~~~~~~~~~~~v~--------~----~P~~~lid~~G~i~~~~~~~~~~~~~~~~ 137 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGIT--------G----IPALVIVKKDGTLISMNGRGEVQSLGPRA 137 (143)
Confidence 556677778999999875 3 38999999999999986443333334444
No 99
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=96.59 E-value=0.00036 Score=50.83 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=24.3
Q ss_pred EEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 48 AVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 48 atFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++||||++|+|++.+... .+.+++.+.|++|
T Consensus 149 ~~~lid~~G~i~~~~~g~----~~~~~l~~~i~~l 179 (181)
T 2p31_A 149 WKYLVAPDGKVVGAWDPT----VSVEEVRPQITAL 179 (181)
T ss_dssp CEEEECTTSCEEEEECTT----SCHHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEeCCC----CCHHHHHHHHHHH
Confidence 899999999999986542 3567787777764
No 100
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=96.56 E-value=0.0033 Score=47.27 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=23.6
Q ss_pred eEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+++||||++|+|++.+.... +.+++.+.|++|
T Consensus 174 p~tflID~~G~i~~~~~g~~----~~~~l~~~I~~l 205 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYSRRF----QTIDIEPDIEAL 205 (208)
T ss_dssp TCEEEECTTSCEEEEECTTS----CGGGGHHHHHHH
T ss_pred ceEEEEcCCCcEEEEeCCCC----CHHHHHHHHHHH
Confidence 78999999999999876432 335566666654
No 101
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=96.47 E-value=0.00063 Score=47.25 Aligned_cols=56 Identities=7% Similarity=0.129 Sum_probs=39.0
Q ss_pred CceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEEC-CCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCC
Q psy1180 13 FPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNT 90 (140)
Q Consensus 13 l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIID-pdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~ 90 (140)
+.||++. |.+.+++++||+. + .+++|||| ++|+|++... .....+.+
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~--------~----~Pt~~lid~~~G~i~~~~~------------------~~~~~~~~- 135 (146)
T 1o8x_A 87 LAVPFAQSEAVQKLSKHFNVE--------S----IPTLIGVDADSGDVVTTRA------------------RATLVKDP- 135 (146)
T ss_dssp EECCGGGHHHHHHHHHHTTCC--------S----SSEEEEEETTTCCEEESCH------------------HHHHTTCT-
T ss_pred eeeccchhhHHHHHHHHhCCC--------C----CCEEEEEECCCCeEEEecc------------------hhHHhhCC-
Confidence 3455554 6678899999975 4 38999999 9999987531 12233445
Q ss_pred eeecCCCCC
Q psy1180 91 VVTPANWKP 99 (140)
Q Consensus 91 ~~~PanW~~ 99 (140)
..+..+|++
T Consensus 136 ~~~~~~w~~ 144 (146)
T 1o8x_A 136 EGEQFPWKD 144 (146)
T ss_dssp TCTTTTCCC
T ss_pred ccccCCCCC
Confidence 678888975
No 102
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.24 E-value=0.0081 Score=42.58 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=37.6
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|.+.++++.||+. |+ ++++|+|++|+++... ... ..+.+++++.|+.+.
T Consensus 103 ~~~~~l~~~~~v~--------~~----Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 103 QKNQELKAQYKVT--------GF----PELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHHTTCC--------SS----SEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCC--------CC----CEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHHHH
Confidence 4556899999986 53 8999999999999876 432 336788888887653
No 103
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.23 E-value=0.034 Score=40.13 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=27.1
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
.+++||||++|+|+..+... ...+.+++++.|++|-
T Consensus 134 ~~~~~liD~~G~i~~~~~g~--~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 134 GTSFYLIDQNGKVMKKYSGI--SNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCEEEEECTTSCEEEEEESS--SSCCHHHHHHHHHHHH
T ss_pred eeEEEEEcCCCeEEEEECCC--CCCCHHHHHHHHHHHh
Confidence 36899999999999886432 2335788888888763
No 104
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.14 E-value=0.016 Score=39.02 Aligned_cols=47 Identities=15% Similarity=0.173 Sum_probs=36.3
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
.+.+++++||+. ++ ++++++|++|+++...... ++.+++.+.|+.+.
T Consensus 74 ~~~~~~~~~~v~--------~~----Pt~~~~d~~G~~~~~~~G~----~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 74 EGVELRKKYGVH--------AY----PTLLFINSSGEVVYRLVGA----EDAPELLKKVKLGV 120 (130)
T ss_dssp THHHHHHHTTCC--------SS----CEEEEECTTSCEEEEEESC----CCHHHHHHHHHHHH
T ss_pred chHHHHHHcCCC--------CC----CEEEEECCCCcEEEEecCC----CCHHHHHHHHHHHH
Confidence 467899999975 43 8999999999998876543 35678888887654
No 105
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.98 E-value=0.015 Score=39.10 Aligned_cols=56 Identities=20% Similarity=0.135 Sum_probs=41.3
Q ss_pred CCceeEE---EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 12 DFPFAII---GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 12 ~l~FPLl---sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++.|-.+ .|.+.+++++||+. ++ ++++++|++|+++..+... .+.+++.+.|+.+.
T Consensus 58 ~v~~~~v~~~~d~~~~~~~~~~v~--------~~----Pt~~~~~~~G~~~~~~~G~----~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 58 KFNIYYARLEEEKNIDLAYKYDAN--------IV----PTTVFLDKEGNKFYVHQGL----MRKNNIETILNSLG 116 (126)
T ss_dssp SCEEEEEETTSSHHHHHHHHTTCC--------SS----SEEEEECTTCCEEEEEESC----CCHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCchHHHHHHcCCc--------ce----eEEEEECCCCCEEEEecCC----CCHHHHHHHHHHHh
Confidence 4555555 36678999999975 43 8999999999998876543 45678888887653
No 106
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=95.72 E-value=0.0025 Score=43.68 Aligned_cols=36 Identities=6% Similarity=0.068 Sum_probs=27.4
Q ss_pred ceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEEC-CCCcEEEE
Q psy1180 14 PFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLS 61 (140)
Q Consensus 14 ~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIID-pdG~Ir~~ 61 (140)
.||+.. |.+.+++++||+. + .+++|||| ++|+|++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~--------~----~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 88 ALPFDQRSTVSELGKTFGVE--------S----IPTLITINADTGAIIGT 125 (144)
T ss_dssp ECCTTCHHHHHHHHHHHTCC--------S----SSEEEEEETTTCCEEES
T ss_pred EeeccchhHHHHHHHHcCCC--------C----CCEEEEEECCCCeEEec
Confidence 444444 5567899999875 4 38999999 89999875
No 107
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.42 E-value=0.034 Score=37.63 Aligned_cols=55 Identities=16% Similarity=0.194 Sum_probs=39.0
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC-CC--CccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA-ST--GRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~-~~--gr~~~EiLr~l~alq 83 (140)
|.+.++++.||+.... | .++++++|++|++++...... .. ..+.+++.+.|+.+.
T Consensus 75 ~~~~~l~~~~~v~~~~-----~----~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQD-----G----IPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSSHHHHHHTTCGGGG-----C----SSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccCC-----c----cceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 6788999999983211 4 389999999999998865421 11 236777777777653
No 108
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=95.29 E-value=0.026 Score=40.57 Aligned_cols=36 Identities=8% Similarity=0.137 Sum_probs=25.4
Q ss_pred EEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHh
Q psy1180 49 VYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQL 84 (140)
Q Consensus 49 tFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~ 84 (140)
+||||++|+|++.+........-.++|.+.|+++..
T Consensus 139 ~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 139 KYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVII 174 (180)
T ss_dssp EEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999986655444444555566665543
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.22 E-value=0.0071 Score=41.64 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=34.8
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEE--EEEEccCCCCccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK--LSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir--~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|.+.+++++||+. |+ ++++++|++|+++ ..... ..+.+++++.|+.++
T Consensus 78 ~~~~~l~~~~~v~--------~~----Pt~~~~d~~G~~v~~~~~~G----~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 78 AQDVALLKHLNVL--------GL----PTILFFDGQGQEHPQARVTG----FMDAETFSAHLRDRQ 127 (134)
T ss_dssp HHHHHHHHHTTCC--------SS----SEEEEECTTSCBCGGGCBCS----CCCHHHHHHHHHHC-
T ss_pred chHHHHHHHcCCC--------CC----CEEEEECCCCCEeeeeeeee----ccCHHHHHHHHHhcC
Confidence 4567899999985 43 8999999999986 33322 246788888887665
No 110
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=95.16 E-value=0.0045 Score=42.56 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=28.8
Q ss_pred ceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEEC-CCCcEEEEE
Q psy1180 14 PFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLSI 62 (140)
Q Consensus 14 ~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIID-pdG~Ir~~~ 62 (140)
.||++. |.+.+++++||+. + .+++|||| ++|+|++..
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~--------~----~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 88 ALPFEDRKGMEFLTTGFDVK--------S----IPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp ECCTTCHHHHHHHHHHTTCC--------S----SSEEEEEETTTCCEEESC
T ss_pred ccccCchHHHHHHHHHcCCC--------C----CCEEEEEECCCCcEEecc
Confidence 455555 6678999999975 4 38999999 999998753
No 111
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=93.73 E-value=0.17 Score=34.35 Aligned_cols=49 Identities=10% Similarity=0.174 Sum_probs=35.9
Q ss_pred EEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 17 IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 17 LlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+-.|.+.++++.||+. ++ ++++++|++|++. .... .++.+++.+.|+.+
T Consensus 89 v~~~~~~~~~~~~~v~--------~~----Pt~~~~~~~g~~~-~~~G----~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 89 VNVDKEPELARDFGIQ--------SI----PTIWFVPMKGEPQ-VNMG----ALSKEQLKGYIDKV 137 (141)
T ss_dssp EETTTCHHHHHHTTCC--------SS----SEEEEECSSSCCE-EEES----CCCHHHHHHHHHHT
T ss_pred EECCCCHHHHHHcCCC--------Cc----CEEEEEeCCCCEE-EEeC----CCCHHHHHHHHHHH
Confidence 3356778999999986 43 8999999999986 3332 24677888888754
No 112
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=93.51 E-value=0.18 Score=34.39 Aligned_cols=53 Identities=9% Similarity=0.158 Sum_probs=37.2
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. + .++++++|++|++. .... ..+.+++.+.|+.+
T Consensus 71 v~~~~vd~~~~~~l~~~~~v~--------~----~Pt~~~~~~~G~~~-~~~G----~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 71 IVIYKVDTEKEQELAGAFGIR--------S----IPSILFIPMEGKPE-MAQG----AMPKASFKKAIDEF 124 (136)
T ss_dssp CEEEEEETTTCHHHHHHTTCC--------S----SCEEEEECSSSCCE-EEES----CCCHHHHHHHHHHH
T ss_pred EEEEEEeCCCCHHHHHHcCCC--------C----CCEEEEECCCCcEE-EEeC----CCCHHHHHHHHHHH
Confidence 444333 35677899999875 4 38999999999986 3322 35678888888765
No 113
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=93.50 E-value=0.017 Score=41.20 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=26.7
Q ss_pred ceeEEEcCc-cHHHHHcCCCcccccccCccceeeeEEEEECCC-CcEEEEE
Q psy1180 14 PFAIIGDEN-RDLAVKLDLLDEENKNNLETAITVRAVYIIGPD-RKLKLSI 62 (140)
Q Consensus 14 ~FPLlsD~~-~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpd-G~Ir~~~ 62 (140)
.||+..+.. .+++++||+. + .+++||||++ |+|++..
T Consensus 108 ~~~~~~~~~~~~l~~~~~v~--------~----~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 108 SIPFANRNIVEALTKKYSVE--------S----IPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp ECCTTCHHHHHHHHHHTTCC--------S----SSEEEEEETTTCCEEESC
T ss_pred ccccCchhHHHHHHHHcCCC--------C----CCEEEEEeCCCCEEEecc
Confidence 344433333 7899999875 4 3899999998 9998753
No 114
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=93.26 E-value=0.19 Score=32.93 Aligned_cols=53 Identities=15% Similarity=0.233 Sum_probs=37.3
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ ++++++ ++|++...+... ++.+++.+.++.+
T Consensus 50 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 103 (112)
T 2voc_A 50 LKIVKIDVDENQETAGKYGVM--------SI----PTLLVL-KDGEVVETSVGF----KPKEALQELVNKH 103 (112)
T ss_dssp CEEEEEETTTCCSHHHHTTCC--------SB----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred cEEEEEECCCCHHHHHHcCCC--------cc----cEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 444333 36678899999875 43 789999 899998876543 4567777777643
No 115
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=93.15 E-value=0.23 Score=31.61 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=36.9
Q ss_pred CceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+. |.+.+++++||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 53 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 53 VTVAKVNIDDNPETPNAYQVR--------SI----PTLMLV-RDGKVIDKKVGA----LPKSQLKAWVESA 106 (107)
T ss_dssp EEEEEEETTTCCHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHT
T ss_pred EEEEEEECCCCHHHHHhcCCC--------cc----CEEEEE-eCCEEEEEecCC----CCHHHHHHHHHhc
Confidence 4443333 5678899999975 43 788888 899998866543 4567787777654
No 116
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=92.93 E-value=0.28 Score=31.41 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=36.6
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. |+ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 53 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (108)
T 2trx_A 53 LTVAKLNIDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEEETTTCTTHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cEEEEEECCCCHHHHHHcCCc--------cc----CEEEEE-eCCEEEEEEecC----CCHHHHHHHHHHh
Confidence 444333 35678899999876 43 788888 899998766543 3567777777654
No 117
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=92.90 E-value=0.28 Score=31.59 Aligned_cols=53 Identities=19% Similarity=0.142 Sum_probs=37.7
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 58 v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 111 (115)
T 1thx_A 58 LKVVKLEIDPNPTTVKKYKVE--------GV----PALRLV-KGEQILDSTEGV----ISKDKLLSFLDTH 111 (115)
T ss_dssp CEEEEEESTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred EEEEEEEcCCCHHHHHHcCCC--------ce----eEEEEE-cCCEEEEEecCC----CCHHHHHHHHHHH
Confidence 544444 35678899999975 43 788888 899998866543 4577888877764
No 118
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=92.24 E-value=0.42 Score=29.85 Aligned_cols=53 Identities=23% Similarity=0.295 Sum_probs=36.6
Q ss_pred CceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+. |.+.+++++||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 48 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 48 VGFGKLNSDENPDIAARYGVM--------SL----PTVIFF-KDGEPVDEIIGA----VPREEIEIRIKNL 101 (104)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----CEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred ceEEEEECCCCHHHHHhCCcc--------cc----CEEEEE-ECCeEhhhccCC----CCHHHHHHHHHHH
Confidence 4444443 6678899999876 43 788888 899998766543 4567777777654
No 119
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=92.21 E-value=0.4 Score=30.42 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=37.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.++++.||+. ++ ++++++ ++|++....... ++.+++.+.|+.+
T Consensus 54 ~~~~~v~~~~~~~~~~~~~i~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 107 (109)
T 3tco_A 54 AVFGRLNVDENQKIADKYSVL--------NI----PTTLIF-VNGQLVDSLVGA----VDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred ceEEEEccccCHHHHHhcCcc--------cC----CEEEEE-cCCcEEEeeecc----CCHHHHHHHHHHH
Confidence 444333 45678999999886 43 788888 899998876543 4677887777654
No 120
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=92.20 E-value=0.22 Score=31.74 Aligned_cols=52 Identities=10% Similarity=0.172 Sum_probs=35.4
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++...+... ++.+++.+.|+.
T Consensus 50 v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 102 (105)
T 1nsw_A 50 VTVAKLNVDENPETTSQFGIM--------SI----PTLILF-KGGRPVKQLIGY----QPKEQLEAQLAD 102 (105)
T ss_dssp CEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHTTT
T ss_pred cEEEEEECcCCHHHHHHcCCc--------cc----cEEEEE-eCCeEEEEEecC----CCHHHHHHHHHH
Confidence 444433 36678899999985 43 788888 899988776543 345666666654
No 121
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=92.17 E-value=0.37 Score=31.86 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=36.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++....... ++.+++.+.|+.+
T Consensus 64 v~~~~vd~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 64 VVMAKVDIDDHTDLAIEYEVS--------AV----PTVLAM-KNGDVVDKFVGI----KDEDQLEAFLKKL 117 (119)
T ss_dssp SEEEEEETTTTHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHcCCC--------cc----cEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 444333 35677899999986 43 677788 899998765432 3567777777654
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=92.09 E-value=0.53 Score=29.93 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=35.0
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ ++++++ ++|++...+... .+.+++.+.|+++
T Consensus 52 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 105 (107)
T 1dby_A 52 LKCVKLNTDESPNVASEYGIR--------SI----PTIMVF-KGGKKCETIIGA----VPKATIVQTVEKY 105 (107)
T ss_dssp CEEEEEETTTCHHHHHHHTCC--------SS----CEEEEE-SSSSEEEEEESC----CCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHCCCC--------cC----CEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 444333 35678899999975 43 666555 799998876543 3456777777654
No 123
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=91.99 E-value=0.058 Score=38.25 Aligned_cols=42 Identities=10% Similarity=0.014 Sum_probs=30.0
Q ss_pred HHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 26 AVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 26 a~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.||+. |+ ++++|||++|+|+....... .+.+++++.|+.+
T Consensus 123 ~~~~~v~--------~~----Pt~~lid~~G~~~~~~~G~~---~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGAN--------AQ----PFYVLIDNEGNPLNKSYAYD---EDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCC--------CS----SEEEEECTTSCBSSCCBCSC---CCHHHHHHHHHHH
T ss_pred HHHcCCC--------Cc----ceEEEECCCCCEEeeccCCC---CCHHHHHHHHHHH
Confidence 5788876 43 89999999999987654321 2277777777654
No 124
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=91.84 E-value=0.42 Score=30.90 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=32.1
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+.+++++||+. ++ ++ |+++++|++...+... +.+++.+.|+++
T Consensus 66 ~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (111)
T 2pu9_C 66 ENKTLAKELGIR--------VV----PT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 109 (111)
T ss_dssp TTHHHHHHHCCS--------BS----SE-EEEESSSSEEEEEESS-----CHHHHHHHHHHH
T ss_pred chHHHHHHcCCC--------ee----eE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 568999999975 44 55 7788999998776432 367777777665
No 125
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=91.70 E-value=0.44 Score=30.14 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=37.3
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+... .+.+++.+.|+.+
T Consensus 51 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 51 LLVAKLDVDENPKTAMRYRVM--------SI----PTVILF-KDGQPVEVLVGA----QPKRNYQAKIEKH 104 (109)
T ss_dssp BEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred eEEEEEECCCCHhHHHhCCCC--------cC----CEEEEE-eCCcEeeeEeCC----CCHHHHHHHHHHH
Confidence 444444 36678899999986 43 788888 899988765543 3567788777754
No 126
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=90.91 E-value=0.21 Score=35.18 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=31.8
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
.|.+.+++++||+. |+ ++++++ ++|++...+... ++.+++.+.|+.+-
T Consensus 77 ~d~~~~la~~~~V~--------~i----PT~~~f-k~G~~v~~~~G~----~~~~~l~~~i~~~l 124 (142)
T 2es7_A 77 LEQSEAIGDRFNVR--------RF----PATLVF-TDGKLRGALSGI----HPWAELLTLMRSIV 124 (142)
T ss_dssp HHHHHHHHHTTTCC--------SS----SEEEEE-SCC----CEESC----CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCC--------cC----CeEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 45667889888876 43 899999 899988766543 45677877777653
No 127
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=90.86 E-value=0.61 Score=29.41 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=35.8
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
+.|-.+ .|.+.+++++||+. ++ +++++++ +|++....... ++.+++.+.|+.
T Consensus 52 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~ 104 (106)
T 3die_A 52 ADILKLDVDENPSTAAKYEVM--------SI----PTLIVFK-DGQPVDKVVGF----QPKENLAEVLDK 104 (106)
T ss_dssp CEEEEEETTTCHHHHHHTTCC--------SB----SEEEEEE-TTEEEEEEESC----CCHHHHHHHHHT
T ss_pred cEEEEEECCcCHHHHHhCCCc--------cc----CEEEEEe-CCeEEEEEeCC----CCHHHHHHHHHH
Confidence 444333 36778899999876 43 6777774 89888765443 466788777764
No 128
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=90.26 E-value=0.28 Score=33.10 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=33.8
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. |+ ++++++ ++|++....... ++.+++.+.|+++
T Consensus 75 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 75 IDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 121 (123)
T ss_dssp TTSCTTTGGGGTCC--------BS----SEEEEE-ESSSEEEEEESC----CCHHHHHHHHTTT
T ss_pred CCCCHHHHHHcCCC--------cc----CEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 35667888888875 43 788888 899998766543 4567787777653
No 129
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=90.22 E-value=0.43 Score=35.17 Aligned_cols=50 Identities=14% Similarity=0.107 Sum_probs=32.9
Q ss_pred cCccHHHHHc--------CCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCC---C-ccHHHHHHHHHh
Q psy1180 20 DENRDLAVKL--------DLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST---G-RSVDEILRVLDS 81 (140)
Q Consensus 20 D~~~~va~~y--------Gv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~---g-r~~~EiLr~l~a 81 (140)
|...++++.| |+. |+ ++++++|++|++.+...|-... + ..+.++|+.+..
T Consensus 83 de~~~l~~~y~~~~q~~~gv~--------g~----Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~ 144 (173)
T 3ira_A 83 EERPDIDNIYMTVCQIILGRG--------GW----PLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKE 144 (173)
T ss_dssp TTCHHHHHHHHHHHHHHHSCC--------CS----SEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHcCCC--------CC----cceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHH
Confidence 4456788777 543 54 8999999999999875442222 2 246777766643
No 130
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=90.01 E-value=0.67 Score=29.76 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=34.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|=.+ .|.+.+++++||+. |+ ++++++ ++|++...+... ++.+++.+.|+++
T Consensus 56 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 109 (112)
T 1t00_A 56 IEIVKLNIDENPGTAAKYGVM--------SI----PTLNVY-QGGEVAKTIVGA----KPKAAIVRDLEDF 109 (112)
T ss_dssp CEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHTHHH
T ss_pred eEEEEEEcCCCHHHHHhCCCC--------cc----cEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 444333 36678899999886 43 555544 899998776543 3466777777654
No 131
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=89.96 E-value=0.37 Score=32.68 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=32.6
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. + .++++++ ++|++....... ++.+++.+.|+++
T Consensus 81 ~~~~~l~~~~~v~--------~----~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 81 DQNPGTAPKYGIR--------G----IPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 126 (128)
T ss_dssp TTCCTTSGGGTCC--------S----SSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCCHHHHHHcCCC--------c----cCEEEEE-eCCEEEEEEcCC----CCHHHHHHHHHHh
Confidence 5566777777765 4 3788888 899998776543 4567787777654
No 132
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=89.78 E-value=0.79 Score=30.31 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=32.5
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
.|.+.+++++||+. |+ ++ |++-++|++...+. |++.+++.+.|+.
T Consensus 59 ~d~~~~l~~~~~V~--------~~----PT-~~~~~~G~~v~~~~-----G~~~~~l~~~i~k 103 (105)
T 3zzx_A 59 VDECEDIAQDNQIA--------CM----PT-FLFMKNGQKLDSLS-----GANYDKLLELVEK 103 (105)
T ss_dssp TTTCHHHHHHTTCC--------BS----SE-EEEEETTEEEEEEE-----SCCHHHHHHHHHH
T ss_pred cccCHHHHHHcCCC--------ee----cE-EEEEECCEEEEEEe-----CcCHHHHHHHHHh
Confidence 46778999999986 54 55 44448999887764 4577888777764
No 133
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=89.74 E-value=0.57 Score=31.99 Aligned_cols=74 Identities=14% Similarity=-0.064 Sum_probs=39.2
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhh-hhCCC
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLF-YKNNT 90 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~-~~~~~ 90 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++....... ++.+++.+.|+.+-.. .+...
T Consensus 57 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l~~~~~~~~ 119 (140)
T 3hz4_A 57 AVFGRINIATNPWTAEKYGVQ--------GT----PTFKFF-CHGRPVWEQVGQ----IYPSILKNAVRDMLQHGEECIR 119 (140)
T ss_dssp SEEEEEETTTCHHHHHHHTCC--------EE----SEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCcCHhHHHHCCCC--------cC----CEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHHhcccccCcc
Confidence 454443 36678999999975 43 666655 789987766543 4566777776654322 11111
Q ss_pred eeecCCCCCCCce
Q psy1180 91 VVTPANWKPGDKV 103 (140)
Q Consensus 91 ~~~PanW~~G~~~ 103 (140)
...|.+|.-+..|
T Consensus 120 ~~~~~~~~~~~~~ 132 (140)
T 3hz4_A 120 KSTPVGQDITGYV 132 (140)
T ss_dssp TSBC---------
T ss_pred cccccCccceeee
Confidence 4578888766554
No 134
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=89.59 E-value=1.2 Score=27.90 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=31.9
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. ++ ++++++ ++|++....... .+.+++.+.|+++
T Consensus 58 ~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 58 TDEAPGIATQYNIR--------SI----PTVLFF-KNGERKESIIGA----VPKSTLTDSIEKY 104 (105)
T ss_dssp TTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEEEC----CCHHHHHHHHHHH
T ss_pred CcchHHHHHhCCCC--------cc----cEEEEE-eCCeEEEEEecC----CCHHHHHHHHHhh
Confidence 35667899999875 43 555555 799998876543 3456777777653
No 135
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=89.14 E-value=0.86 Score=29.64 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=37.7
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|--+ .|.+.+++++||+. ++ ++++++ ++|++...+... .+.+++.+.|++.
T Consensus 50 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~v~~~~G~----~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 50 QVAISSVDSEARPELMKELGFE--------RV----PTLVFI-RDGKVAKVFSGI----MNPRELQALYASI 104 (110)
T ss_dssp TSCEEEEEGGGCHHHHHHTTCC--------SS----CEEEEE-ESSSEEEEEESC----CCHHHHHHHHHTC
T ss_pred CcEEEEEcCcCCHHHHHHcCCc--------cc----CEEEEE-ECCEEEEEEcCC----CCHHHHHHHHHHH
Confidence 3444443 35678899999876 43 788888 899998776543 4567777777654
No 136
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=88.96 E-value=0.99 Score=31.28 Aligned_cols=54 Identities=6% Similarity=0.100 Sum_probs=37.5
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++.|--+ .|.+.+++++||+. |+ +++++++ +|++...+.. .+.+++.+.|+.+.
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~G-----~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEIS--------SV----PTFLFFK-NSQKIDRLDG-----AHAPELTKKVQRHA 117 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC--------SS----SEEEEEE-TTEEEEEEES-----SCHHHHHHHHHHHS
T ss_pred CeEEEEEECCCCHHHHHHcCCC--------CC----CEEEEEE-CCEEEEEEeC-----CCHHHHHHHHHHHh
Confidence 3444443 35567899999976 43 8999998 9998776543 35677877777653
No 137
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.76 E-value=0.99 Score=29.79 Aligned_cols=47 Identities=17% Similarity=0.122 Sum_probs=34.1
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|.+.+++++||+. ++ ++++++++ |++...+.. .++.+++.+.|+.+-
T Consensus 70 ~~~~~l~~~~~v~--------~~----Pt~~~~~~-g~~~~~~~G----~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 70 TVNQVLASRYGIR--------GF----PTIKIFQK-GESPVDYDG----GRTRSDIVSRALDLF 116 (133)
T ss_dssp TTCCHHHHHHTCC--------SS----SEEEEEET-TEEEEEECS----CCSHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCCC--------ee----CeEEEEeC-CCceEEecC----CCCHHHHHHHHHHHh
Confidence 5668899999975 43 89999987 876555433 356788888887653
No 138
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=88.70 E-value=1.3 Score=28.16 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=36.0
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++....... ++.+++.+.|+.+
T Consensus 55 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 55 FGFYYVDVEEEKTLFQRFSLK--------GV----PQILYF-KDGEYKGKMAGD----VEDDEVEQMIADV 108 (111)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----CEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHH
T ss_pred eEEEEEECCcChhHHHhcCCC--------cC----CEEEEE-ECCEEEEEEecc----CCHHHHHHHHHHH
Confidence 444333 35667899999876 43 777777 689887665443 4677888777654
No 139
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=88.54 E-value=0.84 Score=29.21 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=26.3
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. ++ ++++++ .+|++....... ++.+++.+.|+.+
T Consensus 57 ~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 103 (105)
T 4euy_A 57 LQDMQEIAGRYAVF--------TG----PTVLLF-YNGKEILRESRF----ISLENLERTIQLF 103 (105)
T ss_dssp ECCC---------C--------CC----CEEEEE-ETTEEEEEEESS----CCHHHHHHHHHTT
T ss_pred CCCCHHHHHhcCCC--------CC----CEEEEE-eCCeEEEEEeCC----cCHHHHHHHHHHh
Confidence 56778899999875 43 788888 489988766543 4677888877654
No 140
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=88.26 E-value=0.83 Score=30.02 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=31.8
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+.+++++||+. |+ ++ |+++++|++....... +.+++.+.|+++
T Consensus 79 ~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~i~~~ 122 (124)
T 1faa_A 79 ENKTLAKELGIR--------VV----PT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 122 (124)
T ss_dssp TTHHHHHHHCCS--------SS----SE-EEEEETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred chHHHHHHcCCC--------ee----eE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 468899999975 54 44 6777899998776532 367777777765
No 141
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=87.88 E-value=1.7 Score=28.12 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=35.4
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ +++++++ +|++....... +.+++.+.|+.+
T Consensus 56 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~ 108 (109)
T 3f3q_A 56 ADFYKLDVDELGDVAQKNEVS--------AM----PTLLLFK-NGKEVAKVVGA-----NPAAIKQAIAAN 108 (109)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHcCCC--------cc----CEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHhh
Confidence 444333 46678999999986 43 7788887 89988776533 456777777653
No 142
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=87.80 E-value=0.72 Score=30.80 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=32.7
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHH
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLD 80 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~ 80 (140)
.|.+.+++++||+. |+ ++++++ ++|++....... ++.+++.+.|+
T Consensus 82 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~ 126 (128)
T 3ul3_B 82 LDKNESLARKFSVK--------SL----PTIILL-KNKTMLARKDHF----VSSNDLIALIK 126 (128)
T ss_dssp GGGCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEESSC----CCHHHHHHHHT
T ss_pred CCCCHHHHHHcCCC--------Cc----CEEEEE-ECCEEEEEecCC----CCHHHHHHHHH
Confidence 45677999999975 43 788888 689887765432 56777777664
No 143
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=87.49 E-value=1.5 Score=30.75 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=36.7
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ ++++++ ++|++...+... .+.+++.+.|+.+
T Consensus 97 v~~~~vd~~~~~~l~~~~~i~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 97 VRLAKIDTQAHPAVAGRHRIQ--------GI----PAFILF-HKGRELARAAGA----RPASELVGFVRGK 150 (155)
T ss_dssp CEEEEEETTTSTHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred EEEEEEeCCccHHHHHHcCCC--------cC----CEEEEE-eCCeEEEEecCC----CCHHHHHHHHHHH
Confidence 444433 35678899999976 43 778777 799998776543 4567787777754
No 144
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=87.36 E-value=1.2 Score=30.19 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=32.3
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEE-CCCCc--EEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYII-GPDRK--LKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFII-DpdG~--Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. |+ ++++++ |++|. +...... .+.+++.+.|+.+
T Consensus 78 ~~~~~~l~~~~~v~--------~~----Pt~~~~~~~~g~g~~~~~~~G-----~~~~~l~~~l~~~ 127 (133)
T 3cxg_A 78 VDIHPKLNDQHNIK--------AL----PTFEFYFNLNNEWVLVHTVEG-----ANQNDIEKAFQKY 127 (133)
T ss_dssp TTTCHHHHHHTTCC--------SS----SEEEEEEEETTEEEEEEEEES-----CCHHHHHHHHHHH
T ss_pred ccchHHHHHhcCCC--------CC----CEEEEEEecCCCeEEEEEEcC-----CCHHHHHHHHHHH
Confidence 35667899999975 44 788777 55665 7666543 2567888888765
No 145
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.36 E-value=0.72 Score=30.52 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=33.4
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. ++ +++++++++|.+...+.. .++.+++++.|...
T Consensus 75 ~~~~~~l~~~~~v~--------~~----Pt~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 75 ADKHQSLGGQYGVQ--------GF----PTIKIFGANKNKPEDYQG----GRTGEAIVDAALSA 122 (130)
T ss_dssp TTTCHHHHHHHTCC--------SS----SEEEEESSCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCC--------cc----CEEEEEeCCCCeEEEeec----CCCHHHHHHHHHHH
Confidence 35667899999875 43 899999999874443222 35677888777654
No 146
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=87.09 E-value=1.5 Score=29.20 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=31.4
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. ++ ++++++ ++|++...+.. .+.+++.+.|+++
T Consensus 78 d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 78 DELKSVASDWAIQ--------AM----PTFMFL-KEGKILDKVVG-----AKKDELQSTIAKH 122 (124)
T ss_dssp TTSHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred ccCHHHHHHcCCC--------cc----CEEEEE-ECCEEEEEEeC-----CCHHHHHHHHHHh
Confidence 5678999999986 44 554444 89999877643 3567777777654
No 147
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=86.90 E-value=1.4 Score=29.52 Aligned_cols=52 Identities=17% Similarity=0.300 Sum_probs=34.9
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|+++..+... +.+++.+.|+++
T Consensus 78 v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 130 (139)
T 3d22_A 78 LMFLVIDVDELSDFSASWEIK--------AT----PTFFFL-RDGQQVDKLVGA-----NKPELHKKITAI 130 (139)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------EE----SEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHH
T ss_pred CEEEEEeCcccHHHHHHcCCC--------cc----cEEEEE-cCCeEEEEEeCC-----CHHHHHHHHHHH
Confidence 444333 46678899999976 43 666666 899998876532 456777777654
No 148
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=86.77 E-value=1.4 Score=31.65 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=32.7
Q ss_pred ccHHHHHcCCCcccccccCccceeeeEEEEECCC-CcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 22 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPD-RKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 22 ~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpd-G~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
+.++++.|++. |+ +++++||++ |.....+ .|.+.++.++.|+...
T Consensus 90 ~~~l~~~y~v~--------~~----P~~~fld~~~G~~l~~~-----~g~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 90 GQRYIQFYKLG--------DF----PYVSILDPRTGQKLVEW-----HQLDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHHHHHHTCC--------SS----SEEEEECTTTCCCCEEE-----SSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC--------CC----CEEEEEeCCCCcEeeec-----CCCCHHHHHHHHHHHH
Confidence 35688888875 54 799999998 8554443 1368899998887654
No 149
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=86.66 E-value=2.3 Score=27.86 Aligned_cols=46 Identities=9% Similarity=0.096 Sum_probs=32.8
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. ++ ++++++ ++|++...+.. .+.+++.+.|+.+
T Consensus 70 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 115 (116)
T 3qfa_C 70 VDDCQDVASECEVK--------SM----PTFQFF-KKGQKVGEFSG-----ANKEKLEATINEL 115 (116)
T ss_dssp TTTTHHHHHHTTCC--------SS----SEEEEE-SSSSEEEEEES-----CCHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc--------cc----cEEEEE-eCCeEEEEEcC-----CCHHHHHHHHHHh
Confidence 46678999999986 44 666666 78998877543 2567777777653
No 150
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=86.48 E-value=2.1 Score=28.77 Aligned_cols=53 Identities=11% Similarity=0.074 Sum_probs=35.8
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 83 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~ 136 (140)
T 1v98_A 83 LKVVKVNVDEHPGLAARYGVR--------SV----PTLVLF-RRGAPVATWVGA----SPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHCCCC--------cc----CEEEEE-eCCcEEEEEeCC----CCHHHHHHHHHHH
Confidence 444333 35567899999875 43 677777 799998766543 3567777777654
No 151
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=86.31 E-value=1.5 Score=29.93 Aligned_cols=54 Identities=9% Similarity=0.108 Sum_probs=37.1
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|-.+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.+
T Consensus 87 ~~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 87 KVRFVKVNTEAEPALSTRFRIR--------SI----PTIMLY-RNGKMIDMLNGA----VPKAPFDNWLDEQ 141 (148)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEESSC----CCHHHHHHHHHHH
T ss_pred ceEEEEEECcCCHHHHHHCCCC--------cc----CEEEEE-ECCeEEEEEeCC----CCHHHHHHHHHHH
Confidence 3554444 45678999999986 44 677777 689988765432 5678888888754
No 152
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=85.87 E-value=1.6 Score=30.38 Aligned_cols=56 Identities=4% Similarity=-0.106 Sum_probs=36.7
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCC----C--CccHHHHHHHHHhhHhhhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS----T--GRSVDEILRVLDSLQLFYK 87 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~----~--gr~~~EiLr~l~alq~~~~ 87 (140)
.|.+.++++.||+. ++ ++++ ++++|++......... . .++.+++.+.|+.+-...+
T Consensus 63 ~d~~~~l~~~~~v~--------~~----Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~~ 124 (149)
T 3gix_A 63 VDQTAVYTQYFDIS--------YI----PSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAM 124 (149)
T ss_dssp TTTCCHHHHHTTCC--------SS----SEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHcCCC--------cc----CeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHhh
Confidence 37788999999986 43 6776 6788998844332111 1 2467888888887644433
No 153
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=85.43 E-value=2.3 Score=27.04 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=33.9
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|=-+ .|.+.+++++||+. ++ ++ |++.++|++...+.. .+.+++.+.|+.+
T Consensus 57 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~G-----~~~~~l~~~l~~~ 109 (112)
T 1ep7_A 57 VIFLKVDVDAVAAVAEAAGIT--------AM----PT-FHVYKDGVKADDLVG-----ASQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTTTHHHHHHHTCC--------BS----SE-EEEEETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred eEEEEEECCchHHHHHHcCCC--------cc----cE-EEEEECCeEEEEEcC-----CCHHHHHHHHHHH
Confidence 444333 35668899999976 43 55 455589999876543 2567777777654
No 154
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=85.43 E-value=2 Score=27.15 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=35.0
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
++.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+... ++.+++.+.|+.
T Consensus 56 ~~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 109 (111)
T 3uvt_A 56 GVKIAEVDCTAERNICSKYSVR--------GY----PTLLLF-RGGKKVSEHSGG----RDLDSLHRFVLS 109 (111)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEECSC----CSHHHHHHHHHH
T ss_pred ceEEEEEeccccHhHHHhcCCC--------cc----cEEEEE-eCCcEEEeccCC----cCHHHHHHHHHh
Confidence 3444333 35667999999975 43 566666 789887665332 577888887764
No 155
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=85.42 E-value=2.4 Score=27.47 Aligned_cols=45 Identities=11% Similarity=0.103 Sum_probs=30.4
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. ++ +++++ .++|++...+.. .+.+++.+.|+++
T Consensus 72 ~~~~~~~~~~~v~--------~~----Pt~~~-~~~G~~~~~~~G-----~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 72 DKLEETARKYNIS--------AM----PTFIA-IKNGEKVGDVVG-----ASIAKVEDMIKKF 116 (117)
T ss_dssp TTSHHHHHHTTCC--------SS----SEEEE-EETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred CccHHHHHHcCCC--------cc----ceEEE-EeCCcEEEEEeC-----CCHHHHHHHHHHh
Confidence 5567899999976 43 55444 479998876543 3566777777643
No 156
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=85.39 E-value=2.2 Score=27.69 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=33.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ ++ |++.++|++...+... . .+++.+.|+.+
T Consensus 66 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~G~----~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 66 AVFLKVDVDELKPIAEQFSVE--------AM----PT-FLFMKEGDVKDRVVGA----I-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SE-EEEEETTEEEEEEESS----C-HHHHHHHHHHH
T ss_pred cEEEEEECCCCHHHHHHcCCC--------cc----cE-EEEEeCCEEEEEEeCc----C-HHHHHHHHHHH
Confidence 444333 35678899999976 44 55 4445899998766543 2 56777777654
No 157
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=84.93 E-value=2 Score=28.17 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=32.4
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
+.|-.+ .|.+.+++++||+. ++ +++++ .++|++....... ..+++.+.|++
T Consensus 62 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~-~~~G~~~~~~~G~-----~~~~l~~~l~~ 113 (114)
T 2oe3_A 62 VRFVKCDVDESPDIAKECEVT--------AM----PTFVL-GKDGQLIGKIIGA-----NPTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SB----SEEEE-EETTEEEEEEESS-----CHHHHHHHHHT
T ss_pred CEEEEEECCCCHHHHHHCCCC--------cc----cEEEE-EeCCeEEEEEeCC-----CHHHHHHHHHh
Confidence 444333 35567899999876 43 55554 4899998776543 25666666654
No 158
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=84.81 E-value=2.8 Score=26.83 Aligned_cols=52 Identities=23% Similarity=0.191 Sum_probs=34.3
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++...... .+.+++.+.|+.+
T Consensus 60 ~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 60 AIFLKVDVDELKDVAEAYNVE--------AM----PTFLFI-KDGEKVDSVVG-----GRKDDIHTKIVAL 112 (118)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------SB----SEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred cEEEEEEcccCHHHHHHcCCC--------cC----cEEEEE-eCCeEEEEecC-----CCHHHHHHHHHHH
Confidence 444333 35667899999875 43 565555 78998876543 3567777777664
No 159
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=84.93 E-value=0.19 Score=33.62 Aligned_cols=46 Identities=17% Similarity=0.212 Sum_probs=28.4
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECC-CCcE--EEEEEccCCCCccHHHHHHHHHhh
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP-DRKL--KLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDp-dG~I--r~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+.++++.||+. | .++++|+|+ +|++ ....... ++.+++.+.|+.+
T Consensus 66 ~~~~~~~~~~v~--------~----~Pt~~~~d~~~G~~~~~~~~~G~----~~~~~l~~~l~~~ 114 (130)
T 2lst_A 66 EGQELARRYRVP--------G----TPTFVFLVPKAGAWEEVGRLFGS----RPRAEFLKELRQV 114 (130)
Confidence 345666666654 3 489999996 5988 5544332 3455666666654
No 160
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=84.54 E-value=3 Score=25.93 Aligned_cols=53 Identities=17% Similarity=0.188 Sum_probs=33.4
Q ss_pred CCceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|-.+. |.+.++++.||+. ++ ++++++ .+|++...... .+.+++.+.|+++
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~G-----~~~~~l~~~l~~~ 103 (104)
T 2vim_A 50 EVEFAKVDVDQNEEAAAKYSVT--------AM----PTFVFI-KDGKEVDRFSG-----ANETKLRETITRH 103 (104)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred CCEEEEEeccCCHHHHHHcCCc--------cc----cEEEEE-eCCcEEEEEeC-----CCHHHHHHHHHhh
Confidence 34443332 4567899999875 43 565555 58998776543 3567777777653
No 161
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=84.45 E-value=0.99 Score=30.60 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=31.0
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|.+.+++++||+. |+ ++ |++..+|+++..+... .+.+.+.+.++.+.
T Consensus 79 d~~~~l~~~~~v~--------~~----Pt-~~~~~~G~~v~~~~G~----~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 79 SAARLEMNKAGVE--------GT----PT-LVFYKEGRIVDKLVGA----TPWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHHHTCC--------SS----SE-EEEEETTEEEEEEESC----CCHHHHHHHHHHHC
T ss_pred hhhHHHHHHcCCc--------ee----Ce-EEEEcCCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 5678999999986 54 64 4444599998877654 34445555565554
No 162
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=83.22 E-value=3.2 Score=27.81 Aligned_cols=52 Identities=17% Similarity=0.247 Sum_probs=34.0
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ ++++++ ++|++...+.. .+.+++.+.|+.+
T Consensus 69 v~~~~vd~d~~~~l~~~~~v~--------~~----Pt~~i~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 121 (125)
T 1r26_A 69 VKFAKVDADNNSEIVSKCRVL--------QL----PTFIIA-RSGKMLGHVIG-----ANPGMLRQKLRDI 121 (125)
T ss_dssp SEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHcCCC--------cc----cEEEEE-eCCeEEEEEeC-----CCHHHHHHHHHHH
Confidence 444333 35567899999876 43 554444 89998776543 3567777777765
No 163
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=82.87 E-value=3.7 Score=25.97 Aligned_cols=52 Identities=6% Similarity=-0.067 Sum_probs=32.8
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.++++.||+. ++ ++++++ ++|++...+.. .+.+++.+.|+++
T Consensus 53 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 53 AVFLEVDVHQCQGTAATNNIS--------AT----PTFQFF-RNKVRIDQYQG-----ADAVGLEEKIKQH 105 (107)
T ss_dssp SEEEEEETTTSHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred cEEEEEECccCHHHHHhcCCC--------cc----cEEEEE-ECCeEEEEEeC-----CCHHHHHHHHHHh
Confidence 444333 35667899999875 43 666666 78988776543 3445666666543
No 164
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=82.72 E-value=3.6 Score=25.62 Aligned_cols=45 Identities=11% Similarity=0.163 Sum_probs=29.9
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
.|.+.++++.||+. ++ ++ |++.++|++...+.. .+.+++.+.|++
T Consensus 60 ~~~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~g-----~~~~~l~~~i~~ 104 (106)
T 1xwb_A 60 VDECEDIAMEYNIS--------SM----PT-FVFLKNGVKVEEFAG-----ANAKRLEDVIKA 104 (106)
T ss_dssp TTTCHHHHHHTTCC--------SS----SE-EEEEETTEEEEEEES-----CCHHHHHHHHHH
T ss_pred ccchHHHHHHcCCC--------cc----cE-EEEEcCCcEEEEEcC-----CCHHHHHHHHHH
Confidence 35667899999875 43 55 444478998776543 355676666654
No 165
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=82.65 E-value=3.7 Score=25.60 Aligned_cols=46 Identities=9% Similarity=0.092 Sum_probs=31.9
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.++++.||+. ++ ++++++ ++|++...+.. .+.+++.+.|+.+
T Consensus 59 ~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~l~~~ 104 (105)
T 3m9j_A 59 VDDCQDVASESEVK--------SM----PTFQFF-KKGQKVGEFSG-----ANKEKLEATINEL 104 (105)
T ss_dssp TTTCHHHHHHTTCC--------BS----SEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred hhhhHHHHHHcCCC--------cC----cEEEEE-ECCeEEEEEeC-----CCHHHHHHHHHHh
Confidence 35667899999875 43 788888 67888776543 2566777776643
No 166
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=82.50 E-value=3.2 Score=27.26 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=34.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++...... .+.+++.+.|+++
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 119 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIR--------AM----PTFVFF-KNGQKIDTVVG-----ADPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCC--------SS----SEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred EEEEEEECcCCHHHHHHcCCC--------cc----cEEEEE-ECCeEEeeEcC-----CCHHHHHHHHHHh
Confidence 444333 45667899999976 43 566666 68998877543 2567777777654
No 167
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=82.15 E-value=2 Score=27.35 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=33.4
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++++++ ++|++...+.. .+.+++.+.|+++
T Consensus 58 v~~~~v~~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g-----~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 58 VTFLKVDVDELKAVAEEWNVE--------AM----PTFIFL-KDGKLVDKTVG-----ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEEETTTCHHHHHHHHCS--------ST----TEEEEE-ETTEEEEEEEC-----CCTTHHHHHHHHH
T ss_pred cEEEEEEccccHHHHHhCCCC--------cc----cEEEEE-eCCEEEEEEec-----CCHHHHHHHHHHh
Confidence 444333 35667899999875 43 566666 78998877653 2455666666654
No 168
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=81.85 E-value=1.7 Score=28.04 Aligned_cols=53 Identities=21% Similarity=0.286 Sum_probs=34.0
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
++.|-.+ .|.+.+++++||+. ++ ++++++ ++|++....... ++.+++.+.|+.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~i~--------~~----Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~ 115 (121)
T 2i1u_A 62 DLTVAKLDVDTNPETARNFQVV--------SI----PTLILF-KDGQPVKRIVGA----KGKAALLRELSD 115 (121)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHTCS
T ss_pred CeEEEEEECCCCHHHHHhcCCC--------cC----CEEEEE-ECCEEEEEecCC----CCHHHHHHHHHH
Confidence 3444433 35678899999875 43 666666 589987765443 346667666654
No 169
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=81.46 E-value=1.9 Score=28.59 Aligned_cols=55 Identities=16% Similarity=0.072 Sum_probs=36.5
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. |+ ++++++++.+++.... + .-.++.+++++.|+.+
T Consensus 71 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~~g~~~~~~~-~--~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 71 FVAARIDGEKYPDVIERMRVS--------GF----PTMRYYTRIDKQEPFE-Y--SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEEEETTTCHHHHHHTTCC--------SS----SEEEEECSSCSSSCEE-C--CSCCCHHHHHHHHHHH
T ss_pred eEEEEEEccccHhHHHhcCCc--------cC----CEEEEEeCCCCCCceE-e--cCCccHHHHHHHHHhc
Confidence 444333 35677999999986 43 7899998877653111 1 2347889998888754
No 170
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.37 E-value=2 Score=28.21 Aligned_cols=54 Identities=11% Similarity=0.193 Sum_probs=36.4
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++.|-.+ .|.+.+++++||+. ++ ++++++ ++|++ ..+ .-.++.+++.+.|+.+.
T Consensus 55 ~v~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~-~~~----~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 55 EVNIAKVDVTEQPGLSGRFIIN--------AL----PTIYHC-KDGEF-RRY----QGPRTKKDFINFISDKE 109 (126)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEE-EEC----CSCCCHHHHHHHHHTCG
T ss_pred CeEEEEEECcCCHHHHHHcCCc--------cc----CEEEEE-eCCeE-EEe----ecCCCHHHHHHHHHHHh
Confidence 3444444 45678899999975 43 788888 88985 222 12356788888888764
No 171
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=81.11 E-value=3.7 Score=26.13 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=34.4
Q ss_pred CCceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|--+. |.+.++++.||+. ++ ++++++ ++|++...+.. .+.+++.+.|+.+
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 107 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEIS--------AV----PYFIII-HKGTILKELSG-----ADPKEYVSLLEDC 107 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-ETTEEEEEECS-----CCHHHHHHHHHHH
T ss_pred CEEEEEEecccCHHHHHHcCCC--------cc----cEEEEE-ECCEEEEEecC-----CCHHHHHHHHHHH
Confidence 35554443 5678899999975 43 666666 78998876543 2345666667654
No 172
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=81.06 E-value=2 Score=28.27 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=36.4
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECC---CCcEEEEEEccCCCCccHHHHHHHHHhhHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP---DRKLKLSIVYPASTGRSVDEILRVLDSLQLF 85 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDp---dG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~ 85 (140)
++.|--+ .|.+.+++++||+. ++ +++++++. +|++...+... ..+++.+.++..+..
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~--------~~----Pt~~~~~~~~~~G~~~~~~~G~-----~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVS--------SI----PALFFVKKEGNEIKTLDQFVGA-----DVSRIKADIEKFKHH 114 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHHC--
T ss_pred CeEEEEEECCCCHHHHHhcCCC--------CC----CEEEEEeCCCCcceEEEeecCC-----CHHHHHHHHHHhhhc
Confidence 3444433 35678899999876 43 78888876 48888776543 456676677665543
No 173
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=80.70 E-value=3.1 Score=29.58 Aligned_cols=48 Identities=8% Similarity=0.145 Sum_probs=35.3
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
.|.+.+++.+||+. ++ ++..+. ++|++....... ++-+++.+.|+++-
T Consensus 75 vDe~~~la~~ygV~--------si----PTlilF-kdG~~v~~~vG~----~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 75 AEAERGLMARFGVA--------VC----PSLAVV-QPERTLGVIAKI----QDWSSYLAQIGAML 122 (137)
T ss_dssp GGGHHHHHHHHTCC--------SS----SEEEEE-ECCEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc--------cC----CEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 46678999999987 43 777777 799999988765 34567777776543
No 174
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=80.44 E-value=2.4 Score=30.28 Aligned_cols=47 Identities=6% Similarity=0.133 Sum_probs=34.5
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.++|.+||+. ++ +++.+. ++|++....... ++-+++.+.|+++
T Consensus 77 vDe~~~lA~~ygV~--------sI----PTlilF-k~G~~v~~~~G~----~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 77 LEQSEAIGDRFGAF--------RF----PATLVF-TGGNYRGVLNGI----HPWAELINLMRGL 123 (140)
T ss_dssp HHHHHHHHHHHTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc--------cC----CEEEEE-ECCEEEEEEecC----CCHHHHHHHHHHH
Confidence 46678899999987 44 676666 799999887654 4456777777654
No 175
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=80.08 E-value=2.8 Score=27.87 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=31.5
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
|.+.++++.||+. ++ ++++|+ ++|++ ..+ .-.++.+++.+.|+.+-
T Consensus 78 ~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~-~~~----~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 78 TSASMLASKFDVS--------GY----PTIKIL-KKGQA-VDY----DGSRTQEEIVAKVREVS 123 (140)
T ss_dssp TTCHHHHHHTTCC--------SS----SEEEEE-ETTEE-EEC----CSCCCHHHHHHHHHHHH
T ss_pred cccHHHHHHCCCC--------cc----CeEEEE-ECCcE-EEc----CCCCCHHHHHHHHHHhc
Confidence 4457899999976 43 788888 67883 222 12357888888887653
No 176
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=80.63 E-value=0.38 Score=30.20 Aligned_cols=45 Identities=13% Similarity=0.265 Sum_probs=26.4
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
|.+.++++.||+. + .++++++ ++|++...+... ++.+++.+.|++
T Consensus 60 ~~~~~~~~~~~v~--------~----~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 104 (106)
T 2yj7_A 60 DENPNTAAQYGIR--------S----IPTLLLF-KNGQVVDRLVGA----QPKEALKERIDK 104 (106)
Confidence 3445566666653 3 3788888 789887654432 234555555543
No 177
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=78.21 E-value=4 Score=26.15 Aligned_cols=52 Identities=8% Similarity=0.135 Sum_probs=33.3
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.+++++||+. ++ ++ |++.++|++...... .+.+++.+.|+++
T Consensus 58 v~~~~vd~~~~~~~~~~~~v~--------~~----Pt-~~~~~~G~~~~~~~G-----~~~~~l~~~l~~~ 110 (112)
T 1syr_A 58 MVFIKVDVDEVSEVTEKENIT--------SM----PT-FKVYKNGSSVDTLLG-----ANDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTTTHHHHHHTTCC--------SS----SE-EEEEETTEEEEEEES-----CCHHHHHHHHHTT
T ss_pred CEEEEEECCCCHHHHHHcCCC--------cc----cE-EEEEECCcEEEEEeC-----CCHHHHHHHHHHh
Confidence 444444 34567899999876 43 55 445579998776542 2567777777654
No 178
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=78.05 E-value=2.8 Score=30.45 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=36.7
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-.+ .|.+.++++.||+. |+ ++++++ ++|++...... .++.+++.+.|+.+
T Consensus 147 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 147 LRIGAVNCGDDRMLCRMKGVN--------SY----PSLFIF-RSGMAAVKYNG----DRSKESLVAFAMQH 200 (210)
T ss_dssp BEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-CTTSCCEECCS----CCCHHHHHHHHHHH
T ss_pred eEEEEEECCccHHHHHHcCCC--------cC----CeEEEE-ECCCceeEecC----CCCHHHHHHHHHHh
Confidence 555444 35678899999986 44 688888 89998655332 35678888888754
No 179
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=76.66 E-value=3.5 Score=24.71 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=25.5
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. |+ +++++ +|++ ..... .+.+++.+.|+.+
T Consensus 42 ~~~~~~~~~~~v~--------~~----Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~~ 83 (85)
T 1nho_A 42 MVDREKAIEYGLM--------AV----PAIAI---NGVV--RFVGA----PSREELFEAINDE 83 (85)
T ss_dssp TTCGGGGGGTCSS--------CS----SEEEE---TTTE--EEECS----SCCHHHHHHHHHH
T ss_pred CCCHHHHHhCCce--------ee----CEEEE---CCEE--EEccC----CCHHHHHHHHHHH
Confidence 4456777777764 43 66666 8988 22222 3567777777643
No 180
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=75.79 E-value=1.5 Score=28.58 Aligned_cols=59 Identities=10% Similarity=0.004 Sum_probs=36.9
Q ss_pred CCceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 12 DFPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 12 ~l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++.|--+. |.+.+++++||+. ++ +++++++.+|.+... ......+++.+++.+.|+.+-
T Consensus 53 ~~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~~~~~~~~~~-~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 53 KVRAGKVDCQAYPQTCQKAGIK--------AY----PSVKLYQYERAKKSI-WEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEEEEGGGTEE-EEEEECCSCHHHHHHHHHHHH
T ss_pred CeEEEEEeCcCCHHHHHHcCCC--------cc----ceEEEEeCCCcccee-eccccCcCCHHHHHHHHHHHH
Confidence 34444443 5667899999876 43 899999887774322 221112257788888887653
No 181
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=74.89 E-value=1.6 Score=27.82 Aligned_cols=46 Identities=20% Similarity=0.271 Sum_probs=30.1
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEE--EEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK--LSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir--~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. ++ ++++++ ++|++. ..+. -.++.+++.+.|+.+
T Consensus 68 ~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~~~----g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 68 TEESDLAQQYGVR--------GY----PTIKFF-RNGDTASPKEYT----AGREADDIVNWLKKR 115 (120)
T ss_dssp TTCCSSHHHHTCC--------SS----SEEEEE-ESSCSSSCEECC----CCSSHHHHHHHHHTT
T ss_pred CCCHHHHHHCCCC--------cc----cEEEEE-eCCCcCCccccc----CccCHHHHHHHHHhc
Confidence 3456788888875 43 788888 677754 3322 235778888888754
No 182
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=74.50 E-value=8.4 Score=30.57 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=28.6
Q ss_pred eeEEEEECCCCcEEEEEEccCC--------------CCccHHHHHHHHHhhHhhhhC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAS--------------TGRSVDEILRVLDSLQLFYKN 88 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~--------------~gr~~~EiLr~l~alq~~~~~ 88 (140)
.|.=|++|+||++...++++.+ .|-++.+++..|=.+..-.+|
T Consensus 296 ~~VDf~~~~dg~~~vlEvNt~PG~t~~S~~p~~~~~~G~~~~~li~~li~~aler~~ 352 (357)
T 4fu0_A 296 SRVDMFYTPSGEIVFNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKLIGLYVELEH 352 (357)
T ss_dssp EEEEEEECTTCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHTTC----
T ss_pred EEEEEEEeCCCCEEEEEEeCCCCCCcccHHHHHHHHhCcCHHHHHHHHHHHHhcccc
Confidence 4999999999999999999753 345667777655444333333
No 183
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=74.13 E-value=1.7 Score=30.64 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=28.4
Q ss_pred eeEEEEECCCCcEEEEEEccCCC------CccHHHHHHHHHhhHh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAST------GRSVDEILRVLDSLQL 84 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~------gr~~~EiLr~l~alq~ 84 (140)
.++++|+|++|+++......... ..+.+++++.|+.+..
T Consensus 104 ~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 104 IPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp SSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 48999999999997665443221 3678999998887643
No 184
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=72.97 E-value=7.7 Score=27.95 Aligned_cols=54 Identities=11% Similarity=0.043 Sum_probs=35.0
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|-.+ .|.+.++++.||+. |+ ++++++ ++|.+...+... ++.+++.+.|+.+
T Consensus 170 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 170 KILGDMVEAIEYPEWADQYNVM--------AV----PKIVIQ-VNGEDRVEFEGA----YPEKMFLEKLLSA 224 (226)
T ss_dssp CEEEEEEEGGGCHHHHHHTTCC--------SS----CEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cEEEEEEEcccCHHHHHhCCCc--------cc----CeEEEE-eCCceeEEEcCC----CCHHHHHHHHHHh
Confidence 3444443 34567899999886 54 665555 689887765543 4566777777654
No 185
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=72.92 E-value=5.6 Score=29.43 Aligned_cols=40 Identities=5% Similarity=0.112 Sum_probs=33.8
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEE
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 62 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~ 62 (140)
..+.++.+.|.+.++++.||+- + .++.++++++|++....
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~--------~----~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVT--------D----FPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCC--------C----SSEEEEEETTSCEEECC
T ss_pred CceEEEEEeCchHHHHHHcCCC--------C----CCeEEEEeCCCCeEeec
Confidence 5678899999899999999976 3 38999999999988753
No 186
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=72.12 E-value=1.3 Score=31.68 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=23.3
Q ss_pred eeEEEEECCCCcEEEEEEccCCC------CccHHHHHHHHHh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAST------GRSVDEILRVLDS 81 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~------gr~~~EiLr~l~a 81 (140)
.++++++|++|+++.......+. -.+++++|+.++.
T Consensus 101 ~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~ 142 (151)
T 3ph9_A 101 VPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKK 142 (151)
T ss_dssp SSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHH
Confidence 48999999999998765543111 1245666665543
No 187
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=71.07 E-value=5.3 Score=29.32 Aligned_cols=48 Identities=17% Similarity=0.138 Sum_probs=33.5
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
.|.+.+++++||+. ++ ++++++ ++|++....... ++.+++.+.|+.+.
T Consensus 70 ~d~~~~l~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 70 IDQNPGTAPKYGIR--------GI----PTLLLF-KNGEVAATKVGA----LSKGQLKEFLDANL 117 (222)
T ss_dssp TTTCTTTGGGGTCC--------SB----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHcCCC--------cC----CEEEEE-ECCeEEEEeccc----cChHHHHHHHHhhc
Confidence 35667888888875 43 666666 589988766543 46778888887653
No 188
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=71.01 E-value=7.9 Score=29.13 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=32.9
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHH
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLD 80 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~ 80 (140)
+.|--+ .|.+.++++.||+. |+ ++++++ ++|++...+... ++.+++.+.++
T Consensus 59 ~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~ 110 (287)
T 3qou_A 59 FILAKLDCDAEQMIAAQFGLR--------AI----PTVYLF-QNGQPVDGFQGP----QPEEAIRALLD 110 (287)
T ss_dssp SEEEEEETTTCHHHHHTTTCC--------SS----SEEEEE-ETTEEEEEEESC----CCHHHHHHHHH
T ss_pred eEEEEEeCccCHHHHHHcCCC--------CC----CeEEEE-ECCEEEEEeeCC----CCHHHHHHHHH
Confidence 444444 36678999999976 54 688888 689988776543 33444444443
No 189
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=70.70 E-value=3.1 Score=26.97 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=26.6
Q ss_pred cHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHH
Q psy1180 23 RDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLD 80 (140)
Q Consensus 23 ~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~ 80 (140)
.+++++||+. |+ ++++++ .+|++...... .++.+++.+.|+
T Consensus 77 ~~~~~~~~i~--------~~----Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~l~ 117 (118)
T 1zma_A 77 QAFRSRYGIP--------TV----PGFVHI-TDGQINVRCDS----SMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHTCC--------SS----CEEEEE-ETTEEEEECCT----TCCHHHHHHHHT
T ss_pred HHHHHHcCCC--------CC----CeEEEE-ECCEEEEEecC----CCCHHHHHHHhh
Confidence 4778888875 43 788888 48988755332 245667666653
No 190
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=68.81 E-value=6.7 Score=25.80 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=23.8
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCccH-HHHHHHHHh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGRSV-DEILRVLDS 81 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr~~-~EiLr~l~a 81 (140)
+...|.||++|+|..+.+-..+....+ ++++++++.
T Consensus 42 V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~ 78 (106)
T 2k9k_A 42 VTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKK 78 (106)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHh
Confidence 588999999999988877543222233 444555544
No 191
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=67.38 E-value=9.7 Score=26.00 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=31.1
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC----CCC--ccHHHHHHHHHhhHh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA----STG--RSVDEILRVLDSLQL 84 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~----~~g--r~~~EiLr~l~alq~ 84 (140)
|.+.+++++||+. + .++++++ .+|++........ -.| .+.+++++.|+++..
T Consensus 64 d~~~~~~~~~~i~--------~----~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 64 TEVPDFNKMYELY--------D----PCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp TTCCTTTTSSCSC--------S----SCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHcCCC--------C----CCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 4456677777664 3 3777777 4788776543311 112 247888888887543
No 192
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=65.91 E-value=6.7 Score=25.03 Aligned_cols=20 Identities=15% Similarity=0.363 Sum_probs=16.9
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
+...|.||++|+|..+.+-.
T Consensus 27 V~v~~~i~~~G~v~~~~v~~ 46 (90)
T 1u07_A 27 VKVKFDVTPDGRVDNVQILS 46 (90)
T ss_dssp EEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEe
Confidence 58899999999998877643
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=62.46 E-value=22 Score=30.11 Aligned_cols=55 Identities=11% Similarity=0.141 Sum_probs=39.7
Q ss_pred CCceeEEE---cCccHHHHHcCCCcccccccCccceeeeEEEEECC---CCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAIIG---DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP---DRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLls---D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDp---dG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+.|--+. |.+.+++++||+. |+ ++++++++ +|++.... ..+++.+++.+.|+.+
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~--------~~----PTl~~f~~g~~~G~~~~~~----~g~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIA--------GF----PTVRFFQAFTKNGSGATLP----GAGANVQTLRMRLIDA 125 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCC--------SB----SEEEEECTTCCSCCCEEEC----CSSCCHHHHHHHHHHH
T ss_pred cEEEEEEECCccccHHHHHHcCCc--------cc----CEEEEEcCcccCCCceeEe----cCCCCHHHHHHHHHHH
Confidence 45555555 5678999999986 54 89999997 77755543 2347888888888754
No 194
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=61.79 E-value=5.7 Score=23.68 Aligned_cols=41 Identities=10% Similarity=0.272 Sum_probs=23.8
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
|.+.+++++||+. |+ +++++ +|++ .... ..+.+++.+.|++
T Consensus 43 ~~~~~~~~~~~v~--------~~----Pt~~~---~G~~--~~~G----~~~~~~l~~~l~~ 83 (85)
T 1fo5_A 43 MENPQKAMEYGIM--------AV----PTIVI---NGDV--EFIG----APTKEALVEAIKK 83 (85)
T ss_dssp SSSCCTTTSTTTC--------CS----SEEEE---TTEE--ECCS----SSSSHHHHHHHHH
T ss_pred CCCHHHHHHCCCc--------cc----CEEEE---CCEE--eeec----CCCHHHHHHHHHH
Confidence 3455666666654 33 66666 7887 2111 2356777777764
No 195
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=58.99 E-value=3.7 Score=28.28 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=10.2
Q ss_pred eeecCCCCCCCc
Q psy1180 91 VVTPANWKPGDK 102 (140)
Q Consensus 91 ~~~PanW~~G~~ 102 (140)
.++|+||++|+-
T Consensus 92 nViPa~W~~Gqt 103 (108)
T 2jnz_A 92 EVIPTAFSIGKT 103 (108)
T ss_dssp EEECSSCCTTCE
T ss_pred eEECCCCCCCCE
Confidence 588999999974
No 196
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=58.74 E-value=25 Score=25.82 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=37.1
Q ss_pred CCceeEEE---cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEE-EEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAIIG---DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK-LSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLls---D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir-~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+.|--+. |.+.++++.||+. ++ ++++++++.+++- ...+ ...|++.+++.+.|..+
T Consensus 65 ~v~~~~vd~~~~~~~~l~~~~~v~--------~~----Pt~~~~~~g~~~~~g~~~--~~~g~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 65 ALYLAALDCAEETNSAVCRDFNIP--------GF----PTVRFFXAFTXNGSGAVF--PVAGADVQTLRERLIDA 125 (244)
T ss_dssp TEEEEEEETTSTTTHHHHHHTTCC--------SS----SEEEEECTTCCSSSCEEC--CCTTCCHHHHHHHHHHH
T ss_pred cEEEEEEeCCchhhHHHHHHcCCC--------cc----CEEEEEeCCCcCCCCeeE--ecCCCCHHHHHHHHHHH
Confidence 35555554 6789999999986 43 7999998743321 1111 23457888888888654
No 197
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=57.92 E-value=4 Score=27.59 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=10.2
Q ss_pred eeecCCCCCCCc
Q psy1180 91 VVTPANWKPGDK 102 (140)
Q Consensus 91 ~~~PanW~~G~~ 102 (140)
.+.|+||++|.-
T Consensus 81 nViPa~W~~G~t 92 (100)
T 3ft1_A 81 EVIPTAFSIGKT 92 (100)
T ss_dssp EEECTTCCTTCE
T ss_pred eEeCCCCCCCcE
Confidence 578999999974
No 198
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=57.32 E-value=8.7 Score=29.66 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=23.6
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCccHH-HHHHHHHh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGRSVD-EILRVLDS 81 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr~~~-EiLr~l~a 81 (140)
+...|.||+||+|..+.+-..+....+| +++++++.
T Consensus 166 V~V~f~Id~dG~V~~v~V~~SSG~~~LD~aAl~AVr~ 202 (229)
T 2grx_C 166 VKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRR 202 (229)
T ss_dssp ECEEEECCTTSCCEEEEECCCSSSTTSHHHHHHHTTS
T ss_pred EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHH
Confidence 6889999999999988775432222344 34455543
No 199
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=57.29 E-value=23 Score=28.75 Aligned_cols=62 Identities=10% Similarity=0.117 Sum_probs=37.7
Q ss_pred eeEEEEECCCCcEEEEEEccCCC----CccHHHHH---HHHHhhHhhhhCCCeeecCCCCCCCceeeCC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAST----GRSVDEIL---RVLDSLQLFYKNNTVVTPANWKPGDKVMIHP 107 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~----gr~~~EiL---r~l~alq~~~~~~~~~~PanW~~G~~~~~~p 107 (140)
.+-+|-++|+|.+..+.+++... +-..+|.. ++|+.|...-..+....=-.|+|||-+|.--
T Consensus 275 ~~Pvv~~hp~g~~~~l~~~~~~~~~i~~l~~~~~~~~~~al~~l~~~~~~p~~~~~~~~~pGd~vi~DN 343 (388)
T 3o2g_A 275 KHKIIELDDKGQVVRINFNNATRDTIFDVPVERVQPFYAALKEFVDLMNSKESKFTFKMNPGDVITFDN 343 (388)
T ss_dssp EEESEEECTTSCEEEECCCTTTBCSCCCSCHHHHHHHHHHHHHHHHHHHSTTTCEEECCCTTCEEEEET
T ss_pred ccCEEEEcCCCCEEEEEeCcccccccCCCCHHHHHHHHHHHHHHHHHhcChhhEEEEEcCCCcEEEEeC
Confidence 46688899999987765554322 33444432 4455544433333234566899999999853
No 200
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=57.21 E-value=21 Score=25.32 Aligned_cols=22 Identities=27% Similarity=0.419 Sum_probs=18.6
Q ss_pred eeEEEEECCCCcEEEEEEccCC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAS 67 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~ 67 (140)
..++||+|.+|+++..-.|...
T Consensus 2 I~~i~Il~~~Gk~~lsk~y~~~ 23 (158)
T 1w63_Q 2 MRFMLLFSRQGKLRLQKWYLAT 23 (158)
T ss_dssp EEEEEEECSSSCEEEEEESSCC
T ss_pred eEEEEEECCCCCEEEEEeCCCC
Confidence 3789999999999999887643
No 201
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=55.46 E-value=19 Score=26.36 Aligned_cols=74 Identities=18% Similarity=0.104 Sum_probs=41.9
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEE---------EEEEccCC--CCccHHHHHHHH
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK---------LSIVYPAS--TGRSVDEILRVL 79 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir---------~~~~~~~~--~gr~~~EiLr~l 79 (140)
++.|--+ .|.+.+++++||+. + ++++++.-+.+... .-..|.+. .+|..+.+.+.|
T Consensus 81 ~v~f~kvD~d~~~~la~~~~I~--------s----iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi 148 (178)
T 3ga4_A 81 LNLFFTVDVNEVPQLVKDLKLQ--------N----VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFL 148 (178)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC--------S----SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHH
T ss_pred CEEEEEEECccCHHHHHHcCCC--------C----CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHH
Confidence 3444332 45678999999987 3 37777776544332 01123333 378899999988
Q ss_pred HhhHhhhhCCCeeecCCCCC
Q psy1180 80 DSLQLFYKNNTVVTPANWKP 99 (140)
Q Consensus 80 ~alq~~~~~~~~~~PanW~~ 99 (140)
..- +..+-.+.-|-||.+
T Consensus 149 ~~~--t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 149 AKI--LNISITVPQAFNVQE 166 (178)
T ss_dssp HHH--HTCCCCCCCSCC---
T ss_pred HHh--cCCCccccCCCChHH
Confidence 642 222222566777764
No 202
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=53.55 E-value=24 Score=24.43 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=23.2
Q ss_pred eeeEEEEECCCCcEEEEEEccCCCCccHH-HHHHHHH
Q psy1180 45 TVRAVYIIGPDRKLKLSIVYPASTGRSVD-EILRVLD 80 (140)
Q Consensus 45 ~~RatFIIDpdG~Ir~~~~~~~~~gr~~~-EiLr~l~ 80 (140)
.+...|-|+++|.|..+.+...+-...++ .++++|+
T Consensus 53 ~~~V~v~l~~dG~v~~v~v~~SSG~~~lD~AAl~AV~ 89 (129)
T 1lr0_A 53 SVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVR 89 (129)
T ss_dssp CEEEEEEECTTSBEEEEEEEECCSCHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHH
Confidence 35778899999999998765433333444 3444444
No 203
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=52.80 E-value=4.4 Score=27.14 Aligned_cols=12 Identities=25% Similarity=0.470 Sum_probs=10.2
Q ss_pred eeecCCCCCCCc
Q psy1180 91 VVTPANWKPGDK 102 (140)
Q Consensus 91 ~~~PanW~~G~~ 102 (140)
.+.|+||++|.-
T Consensus 80 nViP~~W~~G~t 91 (96)
T 1bmw_A 80 DVVPEKYTIGAT 91 (96)
T ss_dssp SCSCSSCCSSSC
T ss_pred eEeCCCCCCCCE
Confidence 579999999964
No 204
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=52.65 E-value=4 Score=26.85 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=22.4
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+++++++..|.+..+.+. ...++.+++.+.|+.+
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~--gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFE--GGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SSEEEEECTTCTTSCEECC--SSCCSTTHHHHHHHHH
T ss_pred CCEEEEEeCCCcccceEec--CCCcCHHHHHHHHHHh
Confidence 4899999988765433211 1125677888888754
No 205
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=52.01 E-value=11 Score=28.36 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=27.4
Q ss_pred ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 22 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 22 ~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
+.+++++||+. |. +++|+.|.+|++. ..... .+.+++.++|+...
T Consensus 188 ~~~l~~~~gv~--------gt----Pt~vi~~~~G~~~-~~~G~----~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 188 NEKLMDDLGAN--------VT----PAIYYMSKENTLQ-QAVGL----PDQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHHHTCC--------SS----CEEEEEETTTEEE-EEESS----CCHHHHHHHTTC--
T ss_pred HHHHHHHcCCC--------CC----CEEEEECCCCCEE-EecCC----CCHHHHHHHHHHHH
Confidence 34566666664 54 7888888889752 22221 35678888777543
No 206
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=49.90 E-value=32 Score=25.64 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=33.2
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
++.|-.+ .+.+.+++++||+. |+ +++|| +|+++ +.. .++.+++++.|+...
T Consensus 174 ~v~~~~vd~~~~~~~~~~~~V~--------~v----Pt~~i---~G~~~--~~G----~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 174 VILSEAVEAYENPDIADKYGVM--------SV----PSIAI---NGYLV--FVG----VPYEEDFLDYVKSAA 225 (243)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC--------SS----SEEEE---TTEEE--EES----CCCHHHHHHHHHHHH
T ss_pred cEEEEEEECccCHHHHHHcCCe--------ee----CeEEE---CCEEE--EeC----CCCHHHHHHHHHHHh
Confidence 4555554 23457889999876 43 77777 78875 222 256788888887653
No 207
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=49.88 E-value=17 Score=21.19 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=23.9
Q ss_pred ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHH
Q psy1180 22 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVL 79 (140)
Q Consensus 22 ~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l 79 (140)
+.+++++||+. |+ +++++ +|+++.. . ...+.+++.+.|
T Consensus 39 ~~~~~~~~~v~--------~~----Pt~~~---~G~~~~~--G---~~~~~~~l~~~l 76 (77)
T 1ilo_A 39 EMDQILEAGLT--------AL----PGLAV---DGELKIM--G---RVASKEEIKKIL 76 (77)
T ss_dssp SHHHHHHHTCS--------SS----SCEEE---TTEEEEC--S---SCCCHHHHHHHC
T ss_pred CHHHHHHCCCC--------cC----CEEEE---CCEEEEc--C---CCCCHHHHHHHh
Confidence 78899999986 43 66666 7887653 1 111566665543
No 208
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=49.25 E-value=2.8 Score=27.34 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=28.4
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
|.+.+++++||+. ++ ++ |++.++|++..... |.+.+++.+.|+.+
T Consensus 76 ~~~~~~~~~~~v~--------~~----Pt-~~~~~~g~~~~~~~-----g~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 76 DELKEVAEKYNVE--------AM----PT-FLFIKDGAEADKVV-----GARKDDLQNTIVKH 120 (130)
T ss_dssp TTSGGGHHHHTCC--------SS----CC-CCBCTTTTCCBCCC-----TTCTTTHHHHHHHH
T ss_pred cchHHHHHHcCCC--------cc----ce-EEEEeCCeEEEEEe-----CCCHHHHHHHHHHH
Confidence 4567788888875 43 44 45558998765432 34556777777654
No 209
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=46.93 E-value=32 Score=24.61 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=34.1
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. |+ +++++++ +|.+.. ...+++.+++.+.++.+
T Consensus 68 ~~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~g~~~~-----~~g~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 68 IPVAKIDATSASVLASRFDVS--------GY----PTIKILK-KGQAVD-----YEGSRTQEEIVAKVREV 120 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTEEEE-----CCSCSCHHHHHHHHHHH
T ss_pred eEEEEEeccCCHHHHHhcCCC--------cC----CEEEEEc-CCCccc-----ccCcccHHHHHHHHhhc
Confidence 444333 46678999999986 44 6888886 565442 12346788888887654
No 210
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=46.33 E-value=18 Score=30.76 Aligned_cols=39 Identities=10% Similarity=0.180 Sum_probs=33.0
Q ss_pred CCCceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEE
Q psy1180 11 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 61 (140)
Q Consensus 11 ~~l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~ 61 (140)
..+.++.+.|.+.++++.||+- + .++.++++++|++...
T Consensus 183 ~~v~v~~v~~~~~~l~~kfgV~--------~----~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 183 HAVAVRRVLNTESDLVNKFGVT--------D----FPSCYLLLRNGSVSRV 221 (519)
T ss_dssp TTEEEEEEETTCHHHHHHHTCC--------C----SSEEEEEETTSCEEEC
T ss_pred CCeeEEEecCchHHHHHHcCCC--------C----CCeEEEEeCCCceeec
Confidence 4578899999999999999986 3 3799999999998765
No 211
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=45.56 E-value=24 Score=27.57 Aligned_cols=52 Identities=19% Similarity=0.371 Sum_probs=34.7
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDS 81 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~a 81 (140)
++.|--+ +|.+.++|++||+. |+ ++++++ ++|++. . + .-.|+.+++.+.++.
T Consensus 67 ~v~~~~Vd~~~~~~l~~~~~v~--------~~----Pt~~~~-~~g~~~-~--~--~G~~~~~~l~~~i~~ 119 (350)
T 1sji_A 67 DIGFVMVDAKKEAKLAKKLGFD--------EE----GSLYVL-KGDRTI-E--F--DGEFAADVLVEFLLD 119 (350)
T ss_dssp SEEEEEEETTTTHHHHHHHTCC--------ST----TEEEEE-ETTEEE-E--E--CSCCCHHHHHHHHHT
T ss_pred CcEEEEEeCCCCHHHHHhcCCC--------cc----ceEEEE-ECCcEE-E--e--cCCCCHHHHHHHHHH
Confidence 3445433 56778999999986 54 778888 678732 2 2 224778888887764
No 212
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=43.83 E-value=49 Score=21.31 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=23.6
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHH
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVL 79 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l 79 (140)
.+.+++++||+. |+ ++++ | +|++ +.. .++.+++.+.+
T Consensus 54 ~~~~l~~~~~V~--------~~----PT~~-i--~G~~---~~G----~~~~~~l~~~~ 90 (106)
T 3kp8_A 54 PQAQECTEAGIT--------SY----PTWI-I--NGRT---YTG----VRSLEALAVAS 90 (106)
T ss_dssp CCCHHHHHTTCC--------SS----SEEE-E--TTEE---EES----CCCHHHHHHHH
T ss_pred hhHHHHHHcCCe--------Ee----CEEE-E--CCEE---ecC----CCCHHHHHHHh
Confidence 568899999986 54 5644 4 7763 222 35667766655
No 213
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=43.30 E-value=25 Score=23.01 Aligned_cols=20 Identities=30% Similarity=0.389 Sum_probs=17.0
Q ss_pred eEEEEECCCCcEEEEEEccC
Q psy1180 47 RAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~ 66 (140)
|..|+.||+|.+..+..++.
T Consensus 134 ~~~~~~DPdG~~iel~~~~~ 153 (156)
T 3kol_A 134 RGVYFYDPDGFMIEIRCDPE 153 (156)
T ss_dssp EEEEEECTTSCEEEEEECCC
T ss_pred cEEEEECCCCCEEEEEecCC
Confidence 78999999999988876654
No 214
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=43.29 E-value=29 Score=22.95 Aligned_cols=42 Identities=14% Similarity=0.009 Sum_probs=28.8
Q ss_pred EEEEECCCCcEEEEEEccC-CCCccHHHHHHHHHhhHhhhhCC
Q psy1180 48 AVYIIGPDRKLKLSIVYPA-STGRSVDEILRVLDSLQLFYKNN 89 (140)
Q Consensus 48 atFIIDpdG~Ir~~~~~~~-~~gr~~~EiLr~l~alq~~~~~~ 89 (140)
+.++.+++|.......... ....+..|+..++.+|+...+.+
T Consensus 22 G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~ 64 (140)
T 3u3g_D 22 GVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFG 64 (140)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGGG
T ss_pred EEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHcC
Confidence 5778888887653333222 23346889999999999877654
No 215
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=43.12 E-value=15 Score=20.57 Aligned_cols=14 Identities=14% Similarity=0.240 Sum_probs=12.2
Q ss_pred EEEEECCCCcEEEE
Q psy1180 48 AVYIIGPDRKLKLS 61 (140)
Q Consensus 48 atFIIDpdG~Ir~~ 61 (140)
+++++|.+|+|.+.
T Consensus 4 ~i~~~d~~g~i~~~ 17 (96)
T 3a0s_A 4 AIITLSKDGRITEW 17 (96)
T ss_dssp EEEEEETTSBEEEE
T ss_pred eEEEEcCCCCEeeh
Confidence 67899999999875
No 216
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=43.01 E-value=36 Score=23.51 Aligned_cols=20 Identities=25% Similarity=0.323 Sum_probs=17.6
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
..++||+|.+|+++..-.|.
T Consensus 2 I~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 2 IRFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEEETTSCEEEEEECS
T ss_pred eEEEEEEcCCCCEEEEEeCC
Confidence 37899999999999988875
No 217
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.55 E-value=19 Score=21.91 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=13.0
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|.+|+|.++
T Consensus 18 ~~i~~~D~~g~I~~~ 32 (115)
T 3b33_A 18 TATLILDDGLAIRYA 32 (115)
T ss_dssp SEEEEECTTCBEEEE
T ss_pred ceEEEECCCCcEEEE
Confidence 478999999999875
No 218
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=41.81 E-value=15 Score=23.25 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=13.2
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=+++++|.+|+|.++
T Consensus 16 ~gviv~D~~g~I~~~ 30 (121)
T 4hi4_A 16 ANVMIADNDLNIIYM 30 (121)
T ss_dssp SEEEEEETTCBEEEE
T ss_pred ccEEEEcCCCeEEEe
Confidence 478999999999886
No 219
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=41.51 E-value=1e+02 Score=24.73 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=26.2
Q ss_pred eeEEEEECCCCcEEEEEEccCCC--------------CccHHHHHHHH
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPAST--------------GRSVDEILRVL 79 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~--------------gr~~~EiLr~l 79 (140)
.|.=|++|++|.+...++++.+- |-++.+++..+
T Consensus 320 ~~vDf~~~~~g~~~vlEINtrPG~t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 320 SRCDFFLTEDGKVYLNELNTMPGFTQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp EEEEEEECTTCCEEEEEEESSCCCC--CHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEEEEECCCCEEEEEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHH
Confidence 58999999999999999987532 55777766444
No 220
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=40.49 E-value=30 Score=28.05 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=34.8
Q ss_pred CceeE-EEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAI-IGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPL-lsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|-- =+|.+.++|++||+. |+ ++++++ ++|.+...+. -.++.+++.+.++..
T Consensus 54 v~~~~vd~~~~~~l~~~~~v~--------~~----Ptl~~~-~~g~~~~~~~----G~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 54 VPLAKVDCTANTNTCNKYGVS--------GY----PTLKIF-RDGEEAGAYD----GPRTADGIVSHLKKQ 107 (481)
T ss_dssp CCEEEEETTTCHHHHHHTTCC--------EE----SEEEEE-ETTEEEEECC----SCSSHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHhcCCC--------CC----CEEEEE-eCCceeeeec----CccCHHHHHHHHHhh
Confidence 45433 356678999999986 54 566666 6786544322 237888888888654
No 221
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=39.06 E-value=44 Score=21.04 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=27.0
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFY 86 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~ 86 (140)
-|.+.+++.+||+. ++++++ .+|+... . ..+.+++.+.|+++-...
T Consensus 34 id~~~~l~~~~g~~-------------vPtl~~--~~G~~v~---g----~~~~~~L~~~l~~~~~~~ 79 (87)
T 1ttz_A 34 IDDDAALESAYGLR-------------VPVLRD--PMGRELD---W----PFDAPRLRAWLDAAPHAL 79 (87)
T ss_dssp CTTCHHHHHHHTTT-------------CSEEEC--TTCCEEE---S----CCCHHHHHHHHHTCC---
T ss_pred CCCCHHHHHHhCCC-------------cCeEEE--ECCEEEe---C----CCCHHHHHHHHHHHHHHH
Confidence 34567888888752 266666 5687753 1 135677777777544333
No 222
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=38.59 E-value=34 Score=22.64 Aligned_cols=19 Identities=11% Similarity=-0.107 Sum_probs=15.7
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
.|+.|+-||||.+..+...
T Consensus 115 ~~~~~f~DPDGn~iEi~~~ 133 (149)
T 4gym_A 115 MYGRSFHDLDGHLWEVMWM 133 (149)
T ss_dssp EEEEEEECTTCCEEEEEEE
T ss_pred EEEEEEEcCCCCEEEEEEE
Confidence 4899999999998877643
No 223
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=38.18 E-value=44 Score=23.85 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=34.7
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ .|.+.+++++||+. ++ +++++++ +|++.. + .-.++.+++++.|+..
T Consensus 183 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~g~~~~---~--~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 183 IPLAKVDATAETDLAKRFDVS--------GY----PTLKIFR-KGRPYD---Y--NGPREKYGIVDYMIEQ 235 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTEEEE---C--CSCCSHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHcCCc--------cc----CEEEEEE-CCeEEE---e--cCCCCHHHHHHHHHhh
Confidence 555555 35678999999986 43 6777776 576533 2 2346788888888654
No 224
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=37.37 E-value=28 Score=23.70 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=22.8
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.++.++++ +|+.+.....- .+.+++++.|+.+
T Consensus 77 ~PT~i~f~-~G~ev~Ri~G~----~~~~~f~~~L~~~ 108 (116)
T 3dml_A 77 TPTFVLMA-GDVESGRLEGY----PGEDFFWPMLARL 108 (116)
T ss_dssp SSEEEEEE-TTEEEEEEECC----CCHHHHHHHHHHH
T ss_pred CCEEEEEE-CCEEEeeecCC----CCHHHHHHHHHHH
Confidence 37888888 99988876543 2456777777765
No 225
>3vhj_A BFPC; type IV pilus biogenesis, BFPD, membrane, membrane protein; 1.90A {Escherichia coli}
Probab=37.33 E-value=76 Score=23.44 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=36.2
Q ss_pred EEEEECCCCcEEEEEEccCCCCccHHHHHHHH-HhhHhhhhCCCeeecCCCCCCCceee
Q psy1180 48 AVYIIGPDRKLKLSIVYPASTGRSVDEILRVL-DSLQLFYKNNTVVTPANWKPGDKVMI 105 (140)
Q Consensus 48 atFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l-~alq~~~~~~~~~~PanW~~G~~~~~ 105 (140)
++.-|.+||.|.. ...+ -+.+|+.+.+ +...+..+...+.||+.|.-|+.+-+
T Consensus 97 ~vvaV~kdG~Vv~----d~~v-gs~~ear~~f~~~~s~~~~~d~i~~P~ef~~g~s~~~ 150 (172)
T 3vhj_A 97 LVIGVDKDGMVHF----DKSF-HSKDDAKKFFFDHVAYGYPWDRTYSPSDVGVGESRSI 150 (172)
T ss_dssp EEEEECTTSCEEE----EEEE-SCHHHHHHHHHHHTTTTSCCSEEECCTTTCSSBCCCG
T ss_pred EEEEEecCCcEEe----chhh-CCHHHHHHHHHHHHHhcCccCcEECchhhCCCcceEh
Confidence 3445778999853 2223 4789999888 44446666666889999998877654
No 226
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=37.07 E-value=17 Score=23.80 Aligned_cols=15 Identities=20% Similarity=0.264 Sum_probs=12.6
Q ss_pred EEEEECCCCcEEEEE
Q psy1180 48 AVYIIGPDRKLKLSI 62 (140)
Q Consensus 48 atFIIDpdG~Ir~~~ 62 (140)
-+.|||++|+|.+-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 378999999999864
No 227
>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0
Probab=36.70 E-value=49 Score=21.47 Aligned_cols=21 Identities=19% Similarity=-0.021 Sum_probs=16.9
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|..++.||+|.+........
T Consensus 106 ~~~~~~~DPdG~~iel~~~~~ 126 (134)
T 3fcd_A 106 QREFQVRMPDGDWLNFTAPLA 126 (134)
T ss_dssp EEEEEEECTTSCEEEEEEECC
T ss_pred cEEEEEECCCCCEEEEEEccc
Confidence 389999999999888765543
No 228
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=36.42 E-value=27 Score=20.86 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=12.6
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=++|++|++|+|.++
T Consensus 24 ~~i~~~d~~g~i~~~ 38 (118)
T 3olo_A 24 EASFCLGDNWQFLYV 38 (118)
T ss_dssp SEEEEECTTSBEEEE
T ss_pred ceEEEECCCCcEEEE
Confidence 368999999998875
No 229
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=36.42 E-value=27 Score=21.86 Aligned_cols=15 Identities=7% Similarity=0.107 Sum_probs=12.9
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=+++++|++|+|.++
T Consensus 23 ~~i~~~D~~g~i~~~ 37 (118)
T 3fg8_A 23 LGFMALDEDLRIIYV 37 (118)
T ss_dssp CEEEEECTTCBEEEE
T ss_pred ceEEEECCCCeEEEE
Confidence 368999999999876
No 230
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=36.40 E-value=51 Score=26.04 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=35.9
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ +|.+.++|++||+. |+ +++++. ++|++....+ .-.|+.+++.+.++.+
T Consensus 61 v~~~~Vd~~~~~~l~~~~~v~--------~~----Pt~~~f-~~G~~~~~~~---~G~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 61 VVFARVDCDQHSDIAQRYRIS--------KY----PTLKLF-RNGMMMKREY---RGQRSVKALADYIRQQ 115 (382)
T ss_dssp EEEEEEETTTCHHHHHHTTCC--------EE----SEEEEE-ETTEEEEEEC---CSCCSHHHHHHHHHHH
T ss_pred eEEEEEECCccHHHHHhcCCC--------cC----CEEEEE-eCCcEeeeee---cCcchHHHHHHHHHHh
Confidence 444444 46778999999986 54 666665 5788765322 2247788888888654
No 231
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=36.39 E-value=1.4e+02 Score=23.78 Aligned_cols=21 Identities=14% Similarity=0.384 Sum_probs=18.7
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|.=|++|++|.+...++++.
T Consensus 300 ~rvDf~~~~dg~~~vlEINt~ 320 (372)
T 3tqt_A 300 ARVDFFVTPNNKVLVNEINTI 320 (372)
T ss_dssp EEEEEEECTTCCEEEEEEESS
T ss_pred EEEEEEEeCCCcEEEEEEECC
Confidence 599999999999999999864
No 232
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=35.52 E-value=95 Score=22.46 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=33.7
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEc----cCCCCc--cHHHHHHHHHhhHhhhhC-CC-e
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY----PASTGR--SVDEILRVLDSLQLFYKN-NT-V 91 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~----~~~~gr--~~~EiLr~l~alq~~~~~-~~-~ 91 (140)
|...+++..||+. + ++++++. .+|+...+... .--+|- +-+++.+.|+++-..... ++ +
T Consensus 82 De~~e~a~~y~V~--------s----iPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~~g~~~v 148 (160)
T 2av4_A 82 TEVPDFNTMYELY--------D----PVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGARKGRGLV 148 (160)
T ss_dssp TTCCTTTTTTTCC--------S----SEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHcCCC--------C----CCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhhcCCeEE
Confidence 4556677777665 2 3666444 56776543210 011222 467888888775444433 33 4
Q ss_pred eecCC
Q psy1180 92 VTPAN 96 (140)
Q Consensus 92 ~~Pan 96 (140)
++|-+
T Consensus 149 ~~p~~ 153 (160)
T 2av4_A 149 ISPKD 153 (160)
T ss_dssp ECSSC
T ss_pred ECCCc
Confidence 55655
No 233
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=35.30 E-value=47 Score=21.53 Aligned_cols=20 Identities=15% Similarity=0.057 Sum_probs=16.4
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..|+.||+|.+..+....
T Consensus 110 ~~~~~~~DPdG~~iel~~~~ 129 (138)
T 2a4x_A 110 QRYAIVKDPDGNVVDLFAPL 129 (138)
T ss_dssp EEEEEEECTTCCEEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCC
Confidence 38899999999998876544
No 234
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=33.49 E-value=32 Score=21.28 Aligned_cols=14 Identities=14% Similarity=0.176 Sum_probs=12.5
Q ss_pred EEEEECCCCcEEEE
Q psy1180 48 AVYIIGPDRKLKLS 61 (140)
Q Consensus 48 atFIIDpdG~Ir~~ 61 (140)
+++++|.+|+|.++
T Consensus 17 ~i~~~d~~g~i~~~ 30 (120)
T 2gj3_A 17 AISITDLKANILYA 30 (120)
T ss_dssp EEEEECTTCBEEEE
T ss_pred eEEEECCCCCEEee
Confidence 78999999999875
No 235
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=33.36 E-value=61 Score=23.13 Aligned_cols=44 Identities=18% Similarity=0.335 Sum_probs=27.6
Q ss_pred EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 19 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 19 sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.|.+.+++++||+. |+ +++++ +|++ ..+... ++.+++++.|+.+
T Consensus 175 ~~~~~~l~~~~~v~--------~~----Pt~~~---~G~~-~~~~G~----~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 175 ASENQDLAEQFQVV--------GV----PKIVI---NKGV-AEFVGA----QPENAFLGYIMAV 218 (229)
T ss_dssp GGGCHHHHHHTTCC--------SS----SEEEE---GGGT-EEEESC----CCHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCc--------cc----CEEEE---CCEE-EEeeCC----CCHHHHHHHHHHH
Confidence 34567889999875 43 67766 6774 223232 4567777777654
No 236
>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}
Probab=32.93 E-value=45 Score=21.55 Aligned_cols=20 Identities=15% Similarity=-0.061 Sum_probs=16.1
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..++.||+|.+.......
T Consensus 109 ~~~~~~~DPdG~~iel~~~~ 128 (141)
T 2qnt_A 109 QRVFRFYDPDGHAIEVGESL 128 (141)
T ss_dssp CEEEEEECTTCCEEEEEECC
T ss_pred CEEEEEECCCCCEEEEEecc
Confidence 38899999999988776543
No 237
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=32.90 E-value=1.7e+02 Score=23.27 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=18.6
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|.=|++|++|.+...++++.
T Consensus 318 ~~vDf~~~~dg~~~vlEiN~~ 338 (386)
T 3e5n_A 318 ARVDVFLCADGRIVINEVNTL 338 (386)
T ss_dssp EEEEEEECTTCCEEEEEEESS
T ss_pred EEEEEEEECCCcEEEEEeECC
Confidence 599999999999999999864
No 238
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=32.46 E-value=27 Score=21.22 Aligned_cols=15 Identities=0% Similarity=0.018 Sum_probs=12.9
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=+++++|.+|+|.+.
T Consensus 30 ~~i~~~d~~g~i~~~ 44 (125)
T 3fc7_A 30 DGIVHLTTNGTILSV 44 (125)
T ss_dssp CEEEEEETTSBEEEE
T ss_pred CeEEEEcCCCeEEEE
Confidence 478999999999875
No 239
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=32.45 E-value=27 Score=21.34 Aligned_cols=15 Identities=7% Similarity=0.474 Sum_probs=13.0
Q ss_pred eEEEEECCC-CcEEEE
Q psy1180 47 RAVYIIGPD-RKLKLS 61 (140)
Q Consensus 47 RatFIIDpd-G~Ir~~ 61 (140)
-+++++|++ |+|.++
T Consensus 9 ~~i~~~d~~~g~I~~~ 24 (114)
T 1ll8_A 9 KAIFTVDAKTTEILVA 24 (114)
T ss_dssp CEEEEEETTTCBEEEE
T ss_pred ceEEEEECCCCeEEEe
Confidence 478999999 999876
No 240
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=32.06 E-value=53 Score=20.60 Aligned_cols=20 Identities=25% Similarity=0.454 Sum_probs=16.1
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..|+.||+|.+..+..++
T Consensus 112 ~~~~~~~DPdG~~iel~~~~ 131 (133)
T 3ey7_A 112 ITSFYFRDPDGNLIEVSTYS 131 (133)
T ss_dssp EEEEEEECTTCCEEEEEESC
T ss_pred eEEEEEECCCCCEEEEEecC
Confidence 38999999999988776543
No 241
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=31.87 E-value=30 Score=28.58 Aligned_cols=19 Identities=11% Similarity=0.086 Sum_probs=15.7
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
..+.+||=|||-|.+....
T Consensus 498 ~~~~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 498 KAGASLVRPDGIVAWRTDE 516 (535)
T ss_dssp TTCEEEECTTSBEEEEESS
T ss_pred CCceEeeCCCceeEEecCC
Confidence 3578999999999998743
No 242
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=31.53 E-value=28 Score=21.47 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=12.2
Q ss_pred EEEEECCCCcEEEE
Q psy1180 48 AVYIIGPDRKLKLS 61 (140)
Q Consensus 48 atFIIDpdG~Ir~~ 61 (140)
+++++|++|+|.+.
T Consensus 5 ~i~~~d~~g~i~~~ 18 (119)
T 2vv6_A 5 AMIVIDGHGIIQLF 18 (119)
T ss_dssp EEEEEETTSBEEEE
T ss_pred eEEEECCCCeEEEE
Confidence 67899999999875
No 243
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=31.44 E-value=20 Score=22.42 Aligned_cols=14 Identities=7% Similarity=0.311 Sum_probs=10.4
Q ss_pred ecCCCCCCCceeeC
Q psy1180 93 TPANWKPGDKVMIH 106 (140)
Q Consensus 93 ~PanW~~G~~~~~~ 106 (140)
.|++|+.||.||..
T Consensus 3 ~~~~~~vGd~vmAr 16 (67)
T 3p8d_A 3 MSSEFQINEQVLAC 16 (67)
T ss_dssp --CCCCTTCEEEEE
T ss_pred cCcccccCCEEEEE
Confidence 57899999999864
No 244
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=31.23 E-value=23 Score=25.24 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=25.1
Q ss_pred CceeEEE-cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEE
Q psy1180 13 FPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 62 (140)
Q Consensus 13 l~FPLls-D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~ 62 (140)
+.|-.+. |.+.+++++|+-. |+. .+++++++|.+|++...+
T Consensus 86 v~~~~v~~d~~~~~~~~~~~~--------~v~-~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 86 IELAIISKGRAEDDLRQRLAL--------ERI-AIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp EEEEEECHHHHHHHTTTTTTC--------SSC-CSSEEEEECTTCCEEEEE
T ss_pred cEEEEEECCCCHHHHHHHHHc--------CCC-CcCeEEEECCCCCEEEEE
Confidence 4444443 3445666666521 111 359999999999997765
No 245
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=31.23 E-value=51 Score=21.02 Aligned_cols=19 Identities=21% Similarity=0.223 Sum_probs=15.8
Q ss_pred eEEEEECCCCcEEEEEEcc
Q psy1180 47 RAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~ 65 (140)
|..++.||+|.+.......
T Consensus 102 ~~~~~~DPdG~~iel~~~~ 120 (126)
T 1ecs_A 102 TMAALVDPDGTLLRLIQNE 120 (126)
T ss_dssp EEEEEECTTSCEEEEEECC
T ss_pred EEEEEECCCCCEEEEecch
Confidence 8899999999988776543
No 246
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=31.14 E-value=27 Score=23.14 Aligned_cols=15 Identities=7% Similarity=0.262 Sum_probs=13.1
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|.+|+|.++
T Consensus 18 d~i~~~D~~g~I~~~ 32 (129)
T 3mfx_A 18 EAMILVNANGFIRSC 32 (129)
T ss_dssp SEEEEEETTSBEEEE
T ss_pred ceEEEECCCCEEEeE
Confidence 478999999999876
No 247
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=31.10 E-value=36 Score=21.17 Aligned_cols=15 Identities=7% Similarity=0.235 Sum_probs=12.3
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=++|++|++|+|.++
T Consensus 22 d~i~~~d~~g~i~~v 36 (117)
T 2r78_A 22 DGIFIMDAEGHYLDV 36 (117)
T ss_dssp SEEEEECTTSBEEEE
T ss_pred ceEEEECCCCCEEEe
Confidence 368999999998764
No 248
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=30.60 E-value=64 Score=23.02 Aligned_cols=54 Identities=11% Similarity=0.155 Sum_probs=30.3
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|--+ +|.+.++|++||+- |+ +++.+.. +|.....+... +..+++...+.++
T Consensus 59 ~v~~~~vd~~~~~~l~~~~~v~--------~~----Ptl~~~~-~~~~~~~~~G~----~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 59 KIKLDIYSPFTHKEETEKYGVD--------RV----PTIVIEG-DKDYGIRYIGL----PAGLEFTTLINGI 113 (229)
T ss_dssp TEEEEEECTTTCHHHHHHTTCC--------BS----SEEEEES-SSCCCEEEESC----CCTTHHHHHHHHH
T ss_pred ceEEEEecCcccHHHHHHcCCC--------cC----cEEEEEC-CCcccceecCC----ccHHHHHHHHHHH
Confidence 3444333 45678999999986 43 6777775 44433333332 3344555555443
No 249
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=30.24 E-value=59 Score=20.76 Aligned_cols=20 Identities=20% Similarity=0.291 Sum_probs=16.4
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..|+-||+|.+..+..+.
T Consensus 110 ~~~~~~~DPdGn~iel~~~~ 129 (135)
T 3rri_A 110 HETFFLIDPSNNLLEFKYYF 129 (135)
T ss_dssp EEEEEEECTTCCEEEEEEES
T ss_pred eEEEEEECCCCCEEEEEEEC
Confidence 37899999999988876654
No 250
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=30.14 E-value=28 Score=24.00 Aligned_cols=18 Identities=6% Similarity=-0.012 Sum_probs=14.7
Q ss_pred eEEEEECCCCcEEEEEEc
Q psy1180 47 RAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~ 64 (140)
=+++++|.+|+|++.--.
T Consensus 30 ~gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 30 LEITFVNKDDIFQYYNDS 47 (151)
T ss_dssp SEEEEEETTSBEEEECCC
T ss_pred CceEEEcCCCeEEEEeCC
Confidence 378999999999997543
No 251
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=29.85 E-value=1.5e+02 Score=22.48 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=18.8
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|.=|++|++|++...++++.
T Consensus 263 ~~vD~~~~~~g~~~vlEiN~~ 283 (317)
T 4eg0_A 263 GRADFMLDAAGNAYFLEVNTA 283 (317)
T ss_dssp EEEEEEECTTCCEEEEEEESS
T ss_pred EEEEEEEeCCCCEEEEEeeCC
Confidence 488999999999999999875
No 252
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.38 E-value=1e+02 Score=20.01 Aligned_cols=40 Identities=8% Similarity=0.065 Sum_probs=25.8
Q ss_pred cCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccC
Q psy1180 20 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 20 D~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~ 66 (140)
|.+.+++++|++.... ++. ..++++++ ++|++...+....
T Consensus 68 ~~~~~~~~~~~v~~~~-----~~~-~~Pt~~~~-~~G~~~~~~~G~~ 107 (137)
T 2dj0_A 68 GRYTDVSTRYKVSTSP-----LTK-QLPTLILF-QGGKEAMRRPQID 107 (137)
T ss_dssp TTCHHHHHHTTCCCCS-----SSS-CSSEEEEE-SSSSEEEEESCBC
T ss_pred ccCHHHHHHccCcccC-----CcC-CCCEEEEE-ECCEEEEEecCcC
Confidence 4567899999885221 111 24788888 7899987765443
No 253
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=34.96 E-value=12 Score=24.43 Aligned_cols=14 Identities=7% Similarity=0.337 Sum_probs=11.3
Q ss_pred ecCCCCCCCceeeC
Q psy1180 93 TPANWKPGDKVMIH 106 (140)
Q Consensus 93 ~PanW~~G~~~~~~ 106 (140)
.|+.|+.||.|+..
T Consensus 3 ~~~~~kvGd~clAk 16 (81)
T 2ldm_A 3 MSSEFQINEQVLAS 16 (81)
Confidence 58899999998853
No 254
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=28.57 E-value=91 Score=23.90 Aligned_cols=49 Identities=24% Similarity=0.252 Sum_probs=30.3
Q ss_pred CccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEE-------------EccCCCCccHHHHHHHHHhh
Q psy1180 21 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI-------------VYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 21 ~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~-------------~~~~~~gr~~~EiLr~l~al 82 (140)
.+.++++.||+. |+ +++++++. |.+.... ...-.-.|+.+++++.+...
T Consensus 79 ~~~~l~~~~~I~--------~~----Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 79 KNKALCAKYDVN--------GF----PTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR 140 (298)
T ss_dssp TTHHHHHHTTCC--------BS----SEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTT
T ss_pred cCHHHHHhCCCC--------cc----ceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHh
Confidence 468999999986 54 78888876 4431111 01113347888888887643
No 255
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=28.55 E-value=59 Score=20.65 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=22.3
Q ss_pred HHHHHHHhhHhhhhCCCeeecCCCCCCCceeeC
Q psy1180 74 EILRVLDSLQLFYKNNTVVTPANWKPGDKVMIH 106 (140)
Q Consensus 74 EiLr~l~alq~~~~~~~~~~PanW~~G~~~~~~ 106 (140)
++-+..+.|+...++. ...+..|+.|+.+++.
T Consensus 6 ~Le~Lm~~m~~~y~~~-~~~~~~~~~G~~c~a~ 37 (94)
T 3fdr_A 6 QLDKLVNEMTQHYENS-VPEDLTVHVGDIVAAP 37 (94)
T ss_dssp HHHHHHHHHHHHHTTC-CCCCCCCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHhcC-CCCCCCCCCCCEEEEE
Confidence 4445566677777665 4456789999999874
No 256
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=28.19 E-value=45 Score=20.42 Aligned_cols=14 Identities=7% Similarity=0.143 Sum_probs=12.0
Q ss_pred EEEEECCCCcEEEE
Q psy1180 48 AVYIIGPDRKLKLS 61 (140)
Q Consensus 48 atFIIDpdG~Ir~~ 61 (140)
+++++|++|+|.++
T Consensus 29 ~i~~~d~~g~i~~~ 42 (126)
T 3bwl_A 29 MIDVLDADGTICEV 42 (126)
T ss_dssp EEEEECTTCBEEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 67899999998875
No 257
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=27.90 E-value=61 Score=20.82 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=14.4
Q ss_pred eEEEEECCCCcEEEEEE
Q psy1180 47 RAVYIIGPDRKLKLSIV 63 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~ 63 (140)
|..++.||||....+..
T Consensus 114 ~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 78999999999877653
No 258
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=27.73 E-value=23 Score=22.39 Aligned_cols=33 Identities=12% Similarity=0.269 Sum_probs=22.2
Q ss_pred eeEEEEECCCCcE-EEEEEccCCCCccHHHHHHHHHhh
Q psy1180 46 VRAVYIIGPDRKL-KLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 46 ~RatFIIDpdG~I-r~~~~~~~~~gr~~~EiLr~l~al 82 (140)
.+++++++++|++ ...+ .-.++.+++.+.|+.+
T Consensus 82 ~Pt~~~~~~~~~~~~~~~----~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTY----SGSRTVEDLIKFIAEN 115 (121)
T ss_dssp SSEEEEECSSCTTSCCCC----CCCSCHHHHHHHHHHT
T ss_pred CCeEEEEeCcCCCCceEe----cCCCCHHHHHHHHHhc
Confidence 5899999998774 2221 1235788888888654
No 259
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=27.63 E-value=33 Score=23.79 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=13.2
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=+++++|.+|+|++.
T Consensus 33 ~gi~v~D~~g~I~~~ 47 (152)
T 3mxq_A 33 FALCIVRNDYVIVKV 47 (152)
T ss_dssp CEEEEEETTSBEEEE
T ss_pred CCEEEEcCCCEEEEE
Confidence 378999999999886
No 260
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=27.49 E-value=62 Score=21.33 Aligned_cols=18 Identities=28% Similarity=0.445 Sum_probs=14.2
Q ss_pred eeEEEEECCCCcEEEEEE
Q psy1180 46 VRAVYIIGPDRKLKLSIV 63 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~ 63 (140)
.|..|+.||||....+..
T Consensus 129 ~~~~~~~DPdGn~iEl~~ 146 (147)
T 3zw5_A 129 IMSIYFRDPDRNLIEVSN 146 (147)
T ss_dssp EEEEEEECTTCCEEEEEE
T ss_pred eEEEEEECCCCCEEEEec
Confidence 368999999999876543
No 261
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=27.38 E-value=53 Score=26.82 Aligned_cols=53 Identities=19% Similarity=0.347 Sum_probs=34.2
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcE--EEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL--KLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~I--r~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ +|.+.+++++||+. |+ ++++++. +|.+ ... + .-.|+.+++.+.+...
T Consensus 65 v~~~~vd~~~~~~l~~~~~v~--------~~----Pt~~~~~-~g~~~~~~~--~--~G~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 65 ITLAQIDCTENQDLCMEHNIP--------GF----PSLKIFK-NSDVNNSID--Y--EGPRTAEAIVQFMIKQ 120 (504)
T ss_dssp CEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTCTTCEEE--C--CSCCSHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHhcCCC--------cC----CEEEEEe-CCcccccee--e--cCCCCHHHHHHHHHHh
Confidence 444444 45678999999986 54 6777775 4654 222 2 1247888888888643
No 262
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=27.05 E-value=62 Score=21.36 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=15.9
Q ss_pred eEEEEECCCCcEEEEEEcc
Q psy1180 47 RAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~ 65 (140)
|..|+.||+|.+..+...+
T Consensus 109 ~~~~~~DPdG~~iel~~~~ 127 (150)
T 3bqx_A 109 LRGYVADPDGHIWEIAFNP 127 (150)
T ss_dssp EEEEEECTTCCEEEEEECT
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 8999999999998776554
No 263
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=27.01 E-value=61 Score=23.11 Aligned_cols=31 Identities=10% Similarity=0.011 Sum_probs=18.6
Q ss_pred EEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhH
Q psy1180 49 VYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQ 83 (140)
Q Consensus 49 tFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq 83 (140)
+|+|+.+|+...... --.+.++++++|+.+-
T Consensus 172 t~~v~~~~~~~~~~~----g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 172 SLVLQINDAYFPIEV----DYLSTEPTLKLIRERI 202 (208)
T ss_dssp EEEEEETTEEEEECC----CSSCSHHHHHHHHHHH
T ss_pred EEEEEECCEEEEeeC----CCCCHHHHHHHHHHHH
Confidence 567766676543321 1245788888887653
No 264
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=27.01 E-value=54 Score=22.26 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=22.5
Q ss_pred HHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEcc
Q psy1180 24 DLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 24 ~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~ 65 (140)
+||..||+... .++.+++ ++|.+.+...+-
T Consensus 71 ~IA~~~~V~h~-----------sPq~il~-k~G~~v~~~SH~ 100 (112)
T 3iv4_A 71 YIAKKTNVKHE-----------SPQAFYF-VNGEMVWNRDHG 100 (112)
T ss_dssp HHHHHHTCCCC-----------SSEEEEE-ETTEEEEEEEGG
T ss_pred HHHHHhCCccC-----------CCeEEEE-ECCEEEEEeecc
Confidence 38999998732 3778888 789998886543
No 265
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=26.86 E-value=88 Score=20.02 Aligned_cols=19 Identities=5% Similarity=-0.111 Sum_probs=15.5
Q ss_pred eEEEEECCCCcEEEEEEcc
Q psy1180 47 RAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~ 65 (140)
|..|+.||+|.+.......
T Consensus 110 ~~~~~~DPdG~~iel~~~~ 128 (136)
T 2rk0_A 110 WILAFRDADNIALEAMLGR 128 (136)
T ss_dssp EEEEEECTTCCEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEEcC
Confidence 7899999999988776543
No 266
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=26.39 E-value=38 Score=21.24 Aligned_cols=15 Identities=13% Similarity=0.067 Sum_probs=12.6
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
=+++++|++|+|.+.
T Consensus 27 d~i~~~d~~g~i~~~ 41 (130)
T 1d06_A 27 DATVVSATDGTIVSF 41 (130)
T ss_dssp SEEEEEETTSBEEEE
T ss_pred CeEEEECCCCeEEEE
Confidence 378999999999864
No 267
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=25.36 E-value=1.1e+02 Score=18.03 Aligned_cols=25 Identities=24% Similarity=0.029 Sum_probs=17.1
Q ss_pred ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEE
Q psy1180 22 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 61 (140)
Q Consensus 22 ~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~ 61 (140)
+.+++++||+. + ++++|| +|++.++
T Consensus 44 ~~~~~~~~gv~--------~----vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 44 RIAEAEKAGVK--------S----VPALVI---DGAAFHI 68 (80)
T ss_dssp THHHHHHHTCC--------E----EEEEEE---TTEEEEE
T ss_pred hHHHHHHcCCC--------c----CCEEEE---CCEEEEe
Confidence 56788888865 3 366665 7887654
No 268
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.85 E-value=92 Score=20.47 Aligned_cols=36 Identities=8% Similarity=0.250 Sum_probs=23.9
Q ss_pred eeEEEEECCCCcEEEEEEccCCCCc---cHHHHHHHHHhh
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPASTGR---SVDEILRVLDSL 82 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~~~gr---~~~EiLr~l~al 82 (140)
.+++++++ +|++..........+. ..+++.+.|+..
T Consensus 81 ~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 81 LPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 47888886 8998888776543322 566776666544
No 269
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=24.63 E-value=73 Score=25.06 Aligned_cols=52 Identities=21% Similarity=0.431 Sum_probs=34.7
Q ss_pred CceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+ +|.+.++|++||+. |+ +++++.. +|++. .| .-+|+.+++++.++..
T Consensus 70 v~~~~Vd~~~~~~l~~~~~V~--------~~----PTl~~f~-~G~~~---~y--~G~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 70 VGFGLVDSEKDAAVAKKLGLT--------EE----DSIYVFK-EDEVI---EY--DGEFSADTLVEFLLDV 122 (367)
T ss_dssp EEEEEEETTTTHHHHHHHTCC--------ST----TEEEEEE-TTEEE---EC--CSCCSHHHHHHHHHHH
T ss_pred ceEEEEeCcccHHHHHHcCCC--------cC----ceEEEEE-CCcEE---Ee--CCCCCHHHHHHHHHHh
Confidence 444333 56778999999987 54 6777775 68652 12 2357888888887653
No 270
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=24.61 E-value=46 Score=19.42 Aligned_cols=15 Identities=7% Similarity=0.080 Sum_probs=12.7
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|.+|+|.+.
T Consensus 14 ~~i~~~d~~g~i~~~ 28 (114)
T 3luq_A 14 AALAMFDREMRYLAV 28 (114)
T ss_dssp SEEEEEETTCBEEEE
T ss_pred ceEEEEcCCcEEEEE
Confidence 468899999999875
No 271
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=24.46 E-value=28 Score=30.24 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=36.3
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|-.+ .|.+.++++.||+. |+ ++++++ ++|+++........-.++.+++.+.|+.+
T Consensus 707 ~~~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 707 KVRAGKVDCQAYPQTCQKAGIK--------AY----PSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGK 765 (780)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred CceEEEEECCCCHHHHHhcCCC--------cC----CEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHH
Confidence 3444433 34567889999885 43 788888 77877544433110135778888888765
No 272
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=24.45 E-value=69 Score=19.76 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=12.8
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
|..|+.||+|.+...
T Consensus 110 ~~~~~~DPdG~~iel 124 (126)
T 2p25_A 110 KMTFFFDPDGLPLEL 124 (126)
T ss_dssp EEEEEECTTCCEEEE
T ss_pred EEEEEECCCCCEEEe
Confidence 889999999987654
No 273
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=24.27 E-value=78 Score=20.74 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=15.8
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..|+.||||.+..+..+.
T Consensus 125 ~~~~~~~DPdG~~iEl~~~~ 144 (152)
T 3huh_A 125 IMSIYIRDPDGNLIEISQYV 144 (152)
T ss_dssp EEEEEEECTTCCEEEEEEC-
T ss_pred EEEEEEECCCCCEEEEEecc
Confidence 38899999999988776543
No 274
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=24.09 E-value=77 Score=21.30 Aligned_cols=20 Identities=20% Similarity=-0.002 Sum_probs=17.0
Q ss_pred eeEEEEECCCCcEEEEEEcc
Q psy1180 46 VRAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~ 65 (140)
.|..|+.||+|.+..+...+
T Consensus 114 ~~~~~~~DPdG~~iel~~~~ 133 (160)
T 3r4q_A 114 SYSVYIRDPAGNSVEVGEGK 133 (160)
T ss_dssp CEEEEEECTTCCEEEEEEGG
T ss_pred cEEEEEECCCCCEEEEEeCC
Confidence 48999999999998887655
No 275
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=23.95 E-value=64 Score=22.17 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=23.3
Q ss_pred ccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEE
Q psy1180 22 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 61 (140)
Q Consensus 22 ~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~ 61 (140)
+..+...++.+..+..+ .+. =+++++|++|+|.+.
T Consensus 8 ~~~l~~~l~~l~~~~ld--~l~---~Gii~lD~~g~I~~~ 42 (125)
T 1nwz_A 8 SEDIENTLAKMDDGQLD--GLA---FGAIQLDGDGNILQY 42 (125)
T ss_dssp CTTHHHHTTTCCHHHHT--TCS---SEEEEEETTCBEEEE
T ss_pred cHhHHHHHHHhHHHHHh--ccC---ceEEEECCCCEEEEE
Confidence 45677777776443222 222 388999999999875
No 276
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=23.67 E-value=48 Score=19.87 Aligned_cols=15 Identities=20% Similarity=0.379 Sum_probs=12.6
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|.+|+|.+.
T Consensus 10 ~~i~~~d~~g~i~~~ 24 (126)
T 3mjq_A 10 DMILIINREGRLLYA 24 (126)
T ss_dssp SEEEEEETTSBEEEE
T ss_pred ceEEEEeCCCcEEEE
Confidence 468999999999875
No 277
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=23.50 E-value=42 Score=24.52 Aligned_cols=15 Identities=20% Similarity=0.164 Sum_probs=13.3
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|++|+|.++
T Consensus 33 ~~vii~D~~g~I~~~ 47 (233)
T 3vol_A 33 ANVMIADNDLNIIYM 47 (233)
T ss_dssp SEEEEEETTSBEEEE
T ss_pred CcEEEECCCCcEEEe
Confidence 478999999999986
No 278
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=23.42 E-value=78 Score=21.15 Aligned_cols=19 Identities=11% Similarity=0.036 Sum_probs=15.8
Q ss_pred eEEEEECCCCcEEEEEEcc
Q psy1180 47 RAVYIIGPDRKLKLSIVYP 65 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~ 65 (140)
|..++.||+|....+....
T Consensus 106 ~~~~~~DPdG~~iel~~~~ 124 (148)
T 3rhe_A 106 YTFVGVDPDEHRLRIFCLK 124 (148)
T ss_dssp EEEEEECTTCCEEEEEEEC
T ss_pred cEEEEECCCCCEEEEEEcC
Confidence 7899999999988876543
No 279
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=23.38 E-value=79 Score=20.44 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=15.5
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
.|..|+.||+|.+......
T Consensus 114 ~~~~~~~DPdG~~iel~~~ 132 (141)
T 2rbb_A 114 WYQAVLLDPERNVFRINNV 132 (141)
T ss_dssp EEEEEEECTTSCEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEEc
Confidence 4889999999998877643
No 280
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=23.25 E-value=51 Score=19.04 Aligned_cols=15 Identities=7% Similarity=-0.122 Sum_probs=12.8
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-+++++|++|+|.+.
T Consensus 18 ~~i~~~d~~~~i~~~ 32 (124)
T 3lyx_A 18 DAIVVTDLQGFIIDW 32 (124)
T ss_dssp SEEEEEETTCBEEEE
T ss_pred ceEEEECCCCcEeeh
Confidence 478999999999875
No 281
>2fho_A Spliceosomal protein SF3B155; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.23 E-value=39 Score=19.79 Aligned_cols=34 Identities=26% Similarity=0.601 Sum_probs=22.7
Q ss_pred CCCCCCceeeCCCCCCchhcccCCCCceEEeCCCC
Q psy1180 96 NWKPGDKVMIHPAVKDDELPKLFPKGVDIVDMPSG 130 (140)
Q Consensus 96 nW~~G~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~ 130 (140)
-|..+-+--- -.+|+|+.-+.||.|++.++-|.+
T Consensus 10 ~~~~ei~~rn-rpltDEeLD~~LP~GY~il~pP~~ 43 (47)
T 2fho_A 10 RWEREIDERN-RPLSDEELDAMFPEGYKVLPPPAG 43 (47)
T ss_dssp CCCCCCCCCC-CCSCTTHHHHHSCTTEEECCCCTT
T ss_pred hhhhcccccc-CCCCHHHHHHhCCCCCeecCCCCC
Confidence 3554433322 347899999999999988765543
No 282
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=23.06 E-value=69 Score=19.90 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=13.3
Q ss_pred eeEEEEECCCCcEEEE
Q psy1180 46 VRAVYIIGPDRKLKLS 61 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~ 61 (140)
.|..|+.||+|.+...
T Consensus 110 ~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 110 YYESVVLDPEGNRIEI 125 (127)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 3889999999987654
No 283
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=23.05 E-value=71 Score=22.16 Aligned_cols=27 Identities=19% Similarity=0.330 Sum_probs=15.2
Q ss_pred eEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 47 RAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++ |||| |+.+. . ...+.+++.++|+.+
T Consensus 152 Pt-~vin--g~~~~---~---g~~~~~~l~~~i~~~ 178 (195)
T 2znm_A 152 PT-VIVG--GKYRV---I---FNNGFDGGVHTIKEL 178 (195)
T ss_dssp SE-EEET--TTEEE---C---CCSHHHHHHHHHHHH
T ss_pred Ce-EEEC--CEEEE---c---CCCCHHHHHHHHHHH
Confidence 56 7885 55321 1 114577777777654
No 284
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=22.68 E-value=1.2e+02 Score=20.43 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=17.0
Q ss_pred EEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 49 VYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 49 tFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+|||| |+ ++ +.... -.++++++++|+.|
T Consensus 153 tfiIN--Gk--y~-v~~~~-~~s~e~~~~~i~~L 180 (184)
T 4dvc_A 153 AVVVN--NR--YL-VQGQS-AKSLDEYFDLVNYL 180 (184)
T ss_dssp EEEET--TT--EE-ECGGG-CSSHHHHHHHHHHH
T ss_pred EEEEC--CE--Ee-eCCcC-CCCHHHHHHHHHHH
Confidence 67774 65 22 12222 24789999988876
No 285
>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A
Probab=22.61 E-value=75 Score=20.10 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=13.5
Q ss_pred eEEEEECCCCcEEEEE
Q psy1180 47 RAVYIIGPDRKLKLSI 62 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~ 62 (140)
|..++.||+|.+....
T Consensus 104 ~~~~~~DPdG~~iel~ 119 (122)
T 1qto_A 104 REFAVRDPAGNCVHFT 119 (122)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cEEEEECCCCCEEEEe
Confidence 7889999999887654
No 286
>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A
Probab=22.42 E-value=77 Score=20.09 Aligned_cols=16 Identities=13% Similarity=0.115 Sum_probs=13.9
Q ss_pred eEEEEECCCCcEEEEE
Q psy1180 47 RAVYIIGPDRKLKLSI 62 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~ 62 (140)
|..++.||+|.+....
T Consensus 104 ~~~~~~DPdG~~iel~ 119 (124)
T 1xrk_A 104 REFALRDPAGNCVHFV 119 (124)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred CEEEEECCCCCEEEEE
Confidence 8899999999987765
No 287
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=22.25 E-value=61 Score=22.33 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=38.7
Q ss_pred CCCceeEEEc--Cc-cHHHHHcCCCcccccccCccceeeeEEEEECC-CCcEEEEEEccCCCCccHHHHHHHHHhhHhhh
Q psy1180 11 GDFPFAIIGD--EN-RDLAVKLDLLDEENKNNLETAITVRAVYIIGP-DRKLKLSIVYPASTGRSVDEILRVLDSLQLFY 86 (140)
Q Consensus 11 ~~l~FPLlsD--~~-~~va~~yGv~~~~~~~~~G~~~~~RatFIIDp-dG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~ 86 (140)
+++.|-++.. .+ ..++..||+-..+ .+++.|++. ...-+|.. + ...-+.+.|.+.++.+....
T Consensus 63 gki~Fv~vd~~~~~~~~~l~~fGl~~~~----------~P~v~i~~~~~~~~Ky~~--~-~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 63 GKILFAFIDSDHTDNQRILEFFGLKKEE----------CPAVRLITLEEEMTKYKP--E-SEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp TTCEEEEECTTCGGGHHHHHHTTCCGGG----------CSEEEEEECSSSCEEECC--S-CCCCCHHHHHHHHHHHHTTC
T ss_pred CceEEEEEecchHhHHHHHHHcCCCccc----------CCEEEEEecccccccCCC--C-cccCCHHHHHHHHHHHHcCC
Confidence 3566766554 22 3567777875322 377778875 22223321 1 12224566767776553221
Q ss_pred hCC---CeeecCCCCCC
Q psy1180 87 KNN---TVVTPANWKPG 100 (140)
Q Consensus 87 ~~~---~~~~PanW~~G 100 (140)
=.+ .+-.|.+|+.|
T Consensus 130 L~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 130 IKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp SCEEECCSCCCGGGC--
T ss_pred ccccccCCCCCCCcCCC
Confidence 111 24478888765
No 288
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=22.25 E-value=2.2e+02 Score=22.08 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.8
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|.=|++|++|.+...++++.
T Consensus 290 ~~vD~~~~~~g~~~viEiN~r 310 (364)
T 2i87_A 290 VRADFFVTEDNQIYINETNAM 310 (364)
T ss_dssp EEEEEEECTTCCEEEEEEESS
T ss_pred EEEEEEEecCCCEEEEEEeCC
Confidence 589999999999999999875
No 289
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=22.25 E-value=62 Score=21.05 Aligned_cols=54 Identities=11% Similarity=0.155 Sum_probs=33.5
Q ss_pred EEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhC
Q psy1180 17 IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKN 88 (140)
Q Consensus 17 LlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~ 88 (140)
+..+++ .+..++..+... + .+...|+|.+|++.-+.. ..++++.+..++...+.
T Consensus 82 ~~v~~~-~l~~a~~~m~~~-----~----~~~l~Vvd~~g~~~Giit--------~~dll~~~~~~~~l~~~ 135 (141)
T 2rih_A 82 TVLDTD-PVHVAAEKMRRH-----N----IRHVVVVNKNGELVGVLS--------IRDLCFERAILLELATA 135 (141)
T ss_dssp EEETTS-BHHHHHHHHHHH-----T----CSEEEEECTTSCEEEEEE--------HHHHHSCHHHHHHHHHC
T ss_pred eEEcCC-CHHHHHHHHHHc-----C----CeEEEEEcCCCcEEEEEE--------HHHHHHHHHHHHHHhhh
Confidence 344555 666666554332 2 367889999999887753 45676666655544443
No 290
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=22.05 E-value=70 Score=20.66 Aligned_cols=19 Identities=16% Similarity=0.127 Sum_probs=15.7
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
.|..|+.||+|.+......
T Consensus 104 ~~~~~~~DPdG~~iel~~~ 122 (139)
T 1r9c_A 104 GRSIYFYDDDNHMFELHTG 122 (139)
T ss_dssp CCEEEEECTTSCEEEEECC
T ss_pred eEEEEEECCCCCEEEEEeC
Confidence 4889999999999887643
No 291
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=21.91 E-value=89 Score=19.60 Aligned_cols=18 Identities=17% Similarity=0.047 Sum_probs=14.7
Q ss_pred eEEEEECCCCcEEEEEEc
Q psy1180 47 RAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~ 64 (140)
|..|+.||+|.+......
T Consensus 109 ~~~~~~DPdG~~iel~~~ 126 (135)
T 1f9z_A 109 VIAFVEDPDGYKIELIEE 126 (135)
T ss_dssp EEEEEECTTSCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEec
Confidence 678999999998877643
No 292
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=21.87 E-value=1.1e+02 Score=26.46 Aligned_cols=53 Identities=9% Similarity=0.192 Sum_probs=33.8
Q ss_pred CCceeEE-EcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 12 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 12 ~l~FPLl-sD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
++.|=.+ +|.+.++++.||+. |+ +++++++ +|++ +.+. -.++.+++.+.++.+
T Consensus 487 ~v~~~~vd~~~~~~~~~~~~v~--------~~----Pt~~~~~-~g~~-~~~~----g~~~~~~l~~fi~~~ 540 (780)
T 3apo_A 487 QLKVGTLDCTIHEGLCNMYNIQ--------AY----PTTVVFN-QSSI-HEYE----GHHSAEQILEFIEDL 540 (780)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC--------SS----SEEEEEE-TTEE-EEEC----SCSCHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHcCCC--------cC----CeEEEEc-CCce-eeec----CcccHHHHHHHHHhh
Confidence 3555444 34567899999876 43 7888884 5776 3322 235678888877654
No 293
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=21.74 E-value=83 Score=19.47 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.2
Q ss_pred eeEEEEECCCCcEEEE
Q psy1180 46 VRAVYIIGPDRKLKLS 61 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~ 61 (140)
.|..|+.||+|.+...
T Consensus 117 ~~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 117 KKMAFFFDPDGLPLEL 132 (134)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred eEEEEEECCCCCEEEE
Confidence 3899999999987654
No 294
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=21.54 E-value=73 Score=20.61 Aligned_cols=19 Identities=11% Similarity=0.141 Sum_probs=14.1
Q ss_pred eEEEEECCCCcEEEEEEccC
Q psy1180 47 RAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~~~ 66 (140)
| .++.||||.+..+..++.
T Consensus 104 ~-~~~~DPdGn~iel~~~~~ 122 (128)
T 3g12_A 104 K-AIVLDPDGHSIELCELEG 122 (128)
T ss_dssp E-EEEECTTCCEEEEEC---
T ss_pred E-EEEECCCCCEEEEEEecc
Confidence 6 999999999988776553
No 295
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=21.45 E-value=58 Score=20.04 Aligned_cols=16 Identities=13% Similarity=0.083 Sum_probs=13.1
Q ss_pred eeEEEEECCCCcEEEE
Q psy1180 46 VRAVYIIGPDRKLKLS 61 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~ 61 (140)
.|..|+.||+|.+...
T Consensus 96 ~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 96 AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp CEEEEEEETTTEEEEE
T ss_pred cEEEEEECCCCcEEEE
Confidence 4789999999987654
No 296
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=21.44 E-value=53 Score=26.53 Aligned_cols=55 Identities=16% Similarity=0.317 Sum_probs=33.3
Q ss_pred CceeEEEcCccHHHHHcCCCcccccccCccceeeeEEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhh
Q psy1180 13 FPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSL 82 (140)
Q Consensus 13 l~FPLlsD~~~~va~~yGv~~~~~~~~~G~~~~~RatFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~al 82 (140)
+.|--+.....++++.|++. |+ +++++++..|++.... + .-.++.+++++.|+..
T Consensus 405 v~~~~id~~~~~~~~~~~v~--------~~----Pt~~~~~~~~~~~~~~-~--~G~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 405 IVIAKMDATANDVPSPYEVR--------GF----PTIYFSPANKKLNPKK-Y--EGGRELSDFISYLQRE 459 (481)
T ss_dssp EEEEEEETTSSCCCTTCCCC--------SS----SEEEEECTTCTTSCEE-C--CSCCSHHHHHHHHHHH
T ss_pred EEEEEEECCchhhHhhCCCc--------cc----CEEEEEeCCCeEeeeE-e--CCCCCHHHHHHHHHHh
Confidence 44444444444566666654 43 7999999888752221 1 2237888888888754
No 297
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=21.43 E-value=1.5e+02 Score=19.85 Aligned_cols=36 Identities=22% Similarity=0.438 Sum_probs=20.8
Q ss_pred EEEEECCCCcEEEEEEccCCCCccHHHHHHHHHhhHhhhhCCCeeecCCCCCCC
Q psy1180 48 AVYIIGPDRKLKLSIVYPASTGRSVDEILRVLDSLQLFYKNNTVVTPANWKPGD 101 (140)
Q Consensus 48 atFIIDpdG~Ir~~~~~~~~~gr~~~EiLr~l~alq~~~~~~~~~~PanW~~G~ 101 (140)
.+|-++ ||+|.....|- +..++++.| + .|+.|.|=|
T Consensus 122 ~v~~~~-dGkI~~~~~y~-----D~~~ll~Ql---------G---lp~~w~pa~ 157 (158)
T 4h3u_A 122 TLLRTR-GEEITSDQDYY-----SLSSVLAQS---------G---LPADWTPSD 157 (158)
T ss_dssp EEEEEE-TTEEEEEEEEE-----CHHHHHHHH---------T---CCTTCCC--
T ss_pred EEEEEE-CCEEEEEEEEE-----CHHHHHHHc---------C---CCCCCCCCC
Confidence 456665 79988877653 333444332 3 588887743
No 298
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=21.35 E-value=76 Score=21.14 Aligned_cols=16 Identities=6% Similarity=-0.112 Sum_probs=13.5
Q ss_pred eEEEEECCCCcEEEEE
Q psy1180 47 RAVYIIGPDRKLKLSI 62 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~ 62 (140)
|..|+-||||.+..+.
T Consensus 134 ~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 134 VTAILDDTCGNLIQLM 149 (155)
T ss_dssp EEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 7889999999887664
No 299
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=21.33 E-value=87 Score=21.87 Aligned_cols=19 Identities=11% Similarity=-0.050 Sum_probs=15.2
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
+|+++|+|++|.|....-.
T Consensus 26 v~~~~lvd~dG~vIa~~~~ 44 (136)
T 3t12_B 26 ARYALLIDRKGFVLAHKEA 44 (136)
T ss_dssp CSEEEEEETTC-CCEEEEC
T ss_pred CeEEEEEcCCCCEEEEecc
Confidence 4999999999999887644
No 300
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=21.16 E-value=1.2e+02 Score=19.74 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=22.8
Q ss_pred HHHHHHHHhhHhhhhCCCeeecCCCCCCCceeeC
Q psy1180 73 DEILRVLDSLQLFYKNNTVVTPANWKPGDKVMIH 106 (140)
Q Consensus 73 ~EiLr~l~alq~~~~~~~~~~PanW~~G~~~~~~ 106 (140)
.++.+..+.|+....+. ..-|..|+.|+.|++.
T Consensus 10 ~~l~~L~~~m~~~y~~~-~~~~~~~~~G~~c~a~ 42 (110)
T 2diq_A 10 LQLDKLVNEMTQHYENS-VPEDLTVHVGDIVAAP 42 (110)
T ss_dssp HHHHHHHHHHHHHHTTS-CCCCCCCCTTCEEEEC
T ss_pred HHHHHHHHHHHHHHccC-CCCCCCCCCCCEEEEE
Confidence 44555566677666555 4567789999999864
No 301
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=21.03 E-value=70 Score=20.49 Aligned_cols=15 Identities=0% Similarity=0.098 Sum_probs=12.6
Q ss_pred eEEEEECCCCcEEEE
Q psy1180 47 RAVYIIGPDRKLKLS 61 (140)
Q Consensus 47 RatFIIDpdG~Ir~~ 61 (140)
-.++++|.+|+|.++
T Consensus 10 d~i~v~d~~G~i~yv 24 (111)
T 2vlg_A 10 DIHAVLASNGRIIYI 24 (111)
T ss_dssp CEEEEECTTSBEEEE
T ss_pred CEEEEEcCCCeEEEE
Confidence 367899999999876
No 302
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=20.93 E-value=92 Score=20.37 Aligned_cols=17 Identities=12% Similarity=0.178 Sum_probs=14.0
Q ss_pred eeEEEEECCCCcEEEEE
Q psy1180 46 VRAVYIIGPDRKLKLSI 62 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~ 62 (140)
.|..|+.||||.+....
T Consensus 123 ~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 123 AVSLYFADPNGHALEFT 139 (141)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 48999999999887653
No 303
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=20.81 E-value=1.1e+02 Score=19.13 Aligned_cols=18 Identities=17% Similarity=0.063 Sum_probs=14.6
Q ss_pred eeEEEEECCCCcEEEEEE
Q psy1180 46 VRAVYIIGPDRKLKLSIV 63 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~ 63 (140)
.|..++.||+|.......
T Consensus 106 ~~~~~~~DPdG~~iel~~ 123 (126)
T 2qqz_A 106 VIRFYVSDPFGNRIEFME 123 (126)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred eeEEEEECCCCCEEEEEe
Confidence 388999999999876653
No 304
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=20.76 E-value=88 Score=19.30 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=14.0
Q ss_pred eeEEEEECCCCcEEEEE
Q psy1180 46 VRAVYIIGPDRKLKLSI 62 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~ 62 (140)
.|..++.||+|.+....
T Consensus 100 ~~~~~~~DPdG~~iel~ 116 (119)
T 2pjs_A 100 VQRLFLRDPFGKLINIL 116 (119)
T ss_dssp CEEEEEECTTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEE
Confidence 38999999999987654
No 305
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=20.64 E-value=92 Score=20.50 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=26.5
Q ss_pred EEEEECCC-CcEEEEEEccC-CCCccHHHHHHHHHhhHhhhhCC
Q psy1180 48 AVYIIGPD-RKLKLSIVYPA-STGRSVDEILRVLDSLQLFYKNN 89 (140)
Q Consensus 48 atFIIDpd-G~Ir~~~~~~~-~~gr~~~EiLr~l~alq~~~~~~ 89 (140)
+.+|.+++ |.+........ ....+..|+..++.+|+...+.+
T Consensus 22 G~v~~~~~~~~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~ 65 (141)
T 3hst_B 22 GAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 65 (141)
T ss_dssp EEEEEETTSCSEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcEEEeeeccCCCCchHHHHHHHHHHHHHHHHHCC
Confidence 56677776 65443332222 22336889999999998887643
No 306
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=20.39 E-value=97 Score=20.66 Aligned_cols=18 Identities=11% Similarity=0.032 Sum_probs=15.1
Q ss_pred eEEEEECCCCcEEEEEEc
Q psy1180 47 RAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 47 RatFIIDpdG~Ir~~~~~ 64 (140)
|..|+.||+|.+......
T Consensus 101 ~~~~~~DPdG~~iel~~~ 118 (144)
T 3r6a_A 101 RNMTVRHSDGSVIEYVEH 118 (144)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEEc
Confidence 789999999998877644
No 307
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=20.32 E-value=2e+02 Score=21.97 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=18.8
Q ss_pred eeEEEEECCCCcEEEEEEccC
Q psy1180 46 VRAVYIIGPDRKLKLSIVYPA 66 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~~~ 66 (140)
.|.=|++|++|.+...++++.
T Consensus 289 ~~vD~~~~~~g~~~viEiN~r 309 (343)
T 1e4e_A 289 ARVDMFLQDNGRIVLNEVNTL 309 (343)
T ss_dssp EEEEEEECTTCCEEEEEEESS
T ss_pred EEEEEEEeCCCCEEEEEeeCC
Confidence 589999999999999999875
No 308
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=20.32 E-value=96 Score=19.84 Aligned_cols=19 Identities=11% Similarity=-0.066 Sum_probs=16.0
Q ss_pred eeEEEEECCCCcEEEEEEc
Q psy1180 46 VRAVYIIGPDRKLKLSIVY 64 (140)
Q Consensus 46 ~RatFIIDpdG~Ir~~~~~ 64 (140)
.|..++.||+|....+...
T Consensus 104 ~~~~~~~DPdG~~iel~~~ 122 (137)
T 3itw_A 104 LRQYLVRDLEGHLWEFTRH 122 (137)
T ss_dssp EEEEEEECSSSCEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEEE
Confidence 3899999999998887654
No 309
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=20.10 E-value=1.2e+02 Score=20.76 Aligned_cols=12 Identities=33% Similarity=0.631 Sum_probs=8.6
Q ss_pred cHHHHHHHHHhh
Q psy1180 71 SVDEILRVLDSL 82 (140)
Q Consensus 71 ~~~EiLr~l~al 82 (140)
+.+++.++|+.+
T Consensus 171 ~~~~l~~~i~~~ 182 (193)
T 2rem_A 171 DFEDTLRITDYL 182 (193)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 677777777765
Done!