Query psy11800
Match_columns 220
No_of_seqs 187 out of 1498
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 19:21:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.8 2.2E-20 7.4E-25 133.3 11.8 124 49-212 2-129 (135)
2 1uzk_A Fibrillin-1; glycoprote 99.8 3.2E-20 1.1E-24 136.5 4.5 137 50-202 1-162 (162)
3 2w86_A Fibrillin-1, fibrillin1 99.8 2E-20 6.7E-25 135.4 2.7 135 50-201 2-146 (147)
4 1z1y_A Ookinete surface protei 99.7 1.5E-18 5.2E-23 130.3 5.9 129 62-194 13-170 (186)
5 2bou_A EGF-like module contain 99.7 8.5E-18 2.9E-22 120.9 9.2 117 62-208 9-143 (143)
6 4d90_A EGF-like repeat and dis 99.7 5.1E-17 1.7E-21 116.9 11.5 122 53-204 1-134 (143)
7 1yo8_A Thrombospondin-2; EGF, 99.7 3.9E-17 1.3E-21 141.7 12.5 129 50-211 1-157 (634)
8 1dx5_I Thrombomodulin; serine 99.7 1.5E-17 5.1E-22 115.6 4.2 115 50-201 2-118 (118)
9 1lmj_A Fibrillin 1; EGF, calci 99.6 4E-15 1.4E-19 97.5 6.8 82 120-201 2-85 (86)
10 1emn_A Fibrillin; extracellula 99.5 1.9E-14 6.4E-19 93.3 7.8 75 120-197 4-78 (82)
11 2vj3_A Neurogenic locus notch 99.5 2.3E-14 7.7E-19 101.9 8.3 106 33-174 25-133 (135)
12 1z6c_A Vitamin K-dependent pro 99.5 1E-14 3.4E-19 95.8 5.1 83 120-205 2-87 (87)
13 2bou_A EGF-like module contain 99.5 1.5E-14 5.3E-19 103.8 5.8 101 46-165 38-142 (143)
14 1yo8_A Thrombospondin-2; EGF, 99.5 2.9E-13 9.8E-18 117.6 12.5 109 36-173 25-161 (634)
15 1lmj_A Fibrillin 1; EGF, calci 99.5 4.6E-14 1.6E-18 92.4 5.2 83 50-159 1-85 (86)
16 1emn_A Fibrillin; extracellula 99.4 9E-14 3.1E-18 90.1 5.3 78 48-155 1-78 (82)
17 1x7a_L Coagulation factor IX, 99.4 1.6E-13 5.6E-18 98.6 4.7 83 120-207 47-130 (146)
18 2vj2_A Jagged-1; signalling, p 99.4 1.3E-13 4.5E-18 101.6 4.0 117 63-202 42-168 (169)
19 1z1y_A Ookinete surface protei 99.4 9.2E-14 3.1E-18 104.1 3.1 113 89-208 11-143 (186)
20 1tpg_A T-plasminogen activator 99.3 1.1E-12 3.9E-17 86.5 5.8 60 135-206 25-90 (91)
21 1z6c_A Vitamin K-dependent pro 99.3 4.2E-13 1.4E-17 87.9 3.6 84 50-162 1-86 (87)
22 1aut_L Activated protein C; se 99.3 1.9E-12 6.5E-17 89.2 6.0 73 129-206 22-97 (114)
23 1x7a_L Coagulation factor IX, 99.3 2.4E-12 8.3E-17 92.5 6.0 86 47-165 43-130 (146)
24 2w2n_E LDL receptor, low-densi 99.3 1.3E-12 4.4E-17 88.8 4.0 77 121-201 29-106 (107)
25 2vh0_B Activated factor XA lig 99.3 1.2E-12 4E-17 92.8 1.7 81 121-206 42-124 (134)
26 1nfu_B Coagulation factor XA, 99.3 1.2E-12 4.1E-17 98.0 1.7 87 120-211 41-131 (195)
27 4d90_A EGF-like repeat and dis 99.2 1.7E-11 5.7E-16 87.8 7.7 100 20-160 24-132 (143)
28 2c4f_L Coagulation factor VII 99.2 1.1E-11 3.6E-16 88.7 5.9 87 119-210 45-138 (142)
29 1n7d_A LDL receptor, low-densi 99.2 1.1E-10 3.6E-15 104.0 13.0 154 41-205 202-375 (699)
30 2ygq_A WIF-1, WNT inhibitory f 99.2 1.2E-11 4.1E-16 100.1 6.3 147 25-203 154-308 (324)
31 2w2n_E LDL receptor, low-densi 99.2 5E-12 1.7E-16 85.9 2.4 86 43-159 21-106 (107)
32 2c4f_L Coagulation factor VII 99.2 4.4E-11 1.5E-15 85.5 7.2 85 49-164 44-132 (142)
33 3m0c_C LDL receptor, low-densi 99.2 4.6E-11 1.6E-15 107.4 8.9 99 105-207 296-395 (791)
34 1uzk_A Fibrillin-1; glycoprote 99.2 8.9E-13 3.1E-17 96.5 -1.9 122 32-159 20-161 (162)
35 4fbr_A Lectin, myxobacterial h 99.2 7.7E-15 2.6E-19 114.2 -14.3 149 46-208 26-208 (267)
36 1aut_L Activated protein C; se 99.1 7.1E-11 2.4E-15 81.2 6.5 86 49-163 3-96 (114)
37 2vh0_B Activated factor XA lig 99.1 1.9E-11 6.4E-16 86.6 3.6 85 47-164 37-124 (134)
38 3h5c_B Vitamin K-dependent pro 99.1 5.8E-11 2E-15 96.0 6.9 86 120-210 4-91 (317)
39 1nfu_B Coagulation factor XA, 99.1 2.1E-11 7.1E-16 91.3 3.6 83 48-163 38-123 (195)
40 4fbr_A Lectin, myxobacterial h 99.1 7.6E-14 2.6E-18 108.6 -10.1 138 45-193 92-263 (267)
41 3p5b_L Low density lipoprotein 99.1 1.8E-10 6.3E-15 96.0 8.2 71 132-205 11-81 (400)
42 3fcs_B Integrin beta-3; beta p 99.1 2.3E-10 8E-15 100.7 8.6 128 54-203 436-600 (690)
43 3v65_B Low-density lipoprotein 99.1 3.2E-11 1.1E-15 100.2 1.7 83 121-206 3-86 (386)
44 3h5c_B Vitamin K-dependent pro 99.0 6.6E-10 2.3E-14 89.8 7.7 83 50-166 3-89 (317)
45 3v65_B Low-density lipoprotein 99.0 1.2E-10 4.2E-15 96.6 2.9 85 51-164 2-86 (386)
46 1tpg_A T-plasminogen activator 99.0 4.3E-10 1.5E-14 74.0 4.6 81 73-164 1-90 (91)
47 1dx5_I Thrombomodulin; serine 98.9 2.7E-10 9.3E-15 78.8 2.2 81 120-209 3-85 (118)
48 3fcs_B Integrin beta-3; beta p 98.9 8.8E-09 3E-13 90.7 9.9 129 38-193 460-622 (690)
49 2vj2_A Jagged-1; signalling, p 98.9 2.6E-10 9E-15 83.9 -0.1 119 71-209 14-136 (169)
50 3p5b_L Low density lipoprotein 98.8 2.8E-09 9.7E-14 88.8 5.6 81 53-163 1-81 (400)
51 2ygq_A WIF-1, WNT inhibitory f 98.8 3.2E-09 1.1E-13 85.9 5.6 119 61-208 154-280 (324)
52 2w86_A Fibrillin-1, fibrillin1 98.8 2.9E-10 1E-14 81.7 -2.5 91 119-211 2-114 (147)
53 2jkh_L Factor X light chain; p 98.7 8.2E-09 2.8E-13 61.1 2.8 48 163-211 2-49 (55)
54 1kli_L Factor VIIA; extrinsic 98.6 1.6E-08 5.4E-13 62.6 2.8 50 160-210 3-53 (69)
55 3m0c_C LDL receptor, low-densi 98.6 6.5E-08 2.2E-12 87.0 6.8 84 52-165 312-395 (791)
56 2gy5_A Angiopoietin-1 receptor 98.5 2.7E-07 9.3E-12 77.2 8.5 115 74-204 185-321 (423)
57 1n7d_A LDL receptor, low-densi 98.5 1.6E-07 5.5E-12 83.6 7.2 83 51-163 293-375 (699)
58 3k6s_B Integrin beta-2; cell r 98.5 1.3E-07 4.3E-12 83.3 5.4 123 61-207 436-596 (687)
59 3u7u_G Neuregulin 1; signaling 98.4 1.7E-07 6E-12 55.0 3.7 41 157-203 2-49 (55)
60 1kig_L Factor XA; glycoprotein 98.4 1.1E-07 3.6E-12 55.3 1.9 42 168-210 4-45 (51)
61 1edm_B Factor IX; epidermal gr 98.4 3.7E-07 1.3E-11 49.8 4.0 36 161-202 2-38 (39)
62 2bz6_L Blood coagulation facto 98.4 1.9E-07 6.4E-12 54.7 2.5 46 165-211 2-48 (53)
63 3u7u_G Neuregulin 1; signaling 98.3 4.2E-07 1.4E-11 53.4 3.1 42 46-93 1-49 (55)
64 1edm_B Factor IX; epidermal gr 98.3 1.1E-06 3.7E-11 47.9 4.6 32 51-84 2-34 (39)
65 1kli_L Factor VIIA; extrinsic 98.3 4.8E-07 1.6E-11 55.9 3.0 49 49-98 2-51 (69)
66 2jkh_L Factor X light chain; p 98.3 3.9E-07 1.3E-11 53.8 2.3 45 53-98 2-46 (55)
67 1apq_A Complement protease C1R 98.3 7.1E-07 2.4E-11 52.2 3.5 42 160-202 2-51 (53)
68 1apq_A Complement protease C1R 98.1 2.8E-06 9.7E-11 49.5 4.4 42 50-92 2-51 (53)
69 1egf_A Epidermal growth factor 98.1 6.4E-06 2.2E-10 48.0 5.6 39 161-203 2-44 (53)
70 4aqs_A Laminin subunit beta-1; 98.1 8.8E-06 3E-10 70.0 8.4 38 19-56 279-316 (525)
71 2kl7_A Fibulin-4; secreted, ca 98.0 7E-06 2.4E-10 50.9 4.1 39 161-199 2-42 (71)
72 2k2s_B Micronemal protein 6; m 98.0 7.5E-07 2.6E-11 53.5 -0.4 46 158-208 7-55 (61)
73 2k2s_B Micronemal protein 6; m 98.0 1.4E-06 4.8E-11 52.3 0.6 44 48-97 7-54 (61)
74 2wph_E Coagulation factor IXA 98.0 4.1E-06 1.4E-10 50.0 2.6 41 165-206 2-43 (59)
75 1k36_A Epiregulin; EGF-like fo 97.9 6.2E-06 2.1E-10 46.5 3.0 38 161-204 2-44 (46)
76 2gy5_A Angiopoietin-1 receptor 97.9 1.7E-05 5.8E-10 66.4 6.4 108 38-160 187-319 (423)
77 1kig_L Factor XA; glycoprotein 97.9 3.8E-06 1.3E-10 48.6 1.7 39 58-97 4-42 (51)
78 1a3p_A Epidermal growth factor 97.9 1.9E-05 6.6E-10 44.3 4.3 35 164-202 2-40 (45)
79 1gl4_A Nidogen-1, entactin; im 97.8 7.9E-07 2.7E-11 69.6 -2.4 55 160-216 3-58 (285)
80 2kl7_A Fibulin-4; secreted, ca 97.8 1.7E-05 5.8E-10 49.2 3.7 61 50-114 1-63 (71)
81 1hae_A Heregulin-alpha; growth 97.8 1.4E-05 4.9E-10 48.3 3.1 43 162-210 6-55 (63)
82 2bz6_L Blood coagulation facto 97.8 1.2E-05 4E-10 46.9 2.2 39 59-98 6-45 (53)
83 1k36_A Epiregulin; EGF-like fo 97.8 2.8E-05 9.4E-10 43.8 3.7 37 51-93 2-43 (46)
84 1egf_A Epidermal growth factor 97.7 3.2E-05 1.1E-09 45.0 3.9 37 51-93 2-44 (53)
85 2p28_B Integrin beta-2; hybrid 97.7 4.5E-05 1.6E-09 57.9 5.0 88 104-203 107-214 (217)
86 3k6s_B Integrin beta-2; cell r 97.7 6.6E-05 2.3E-09 66.2 6.8 92 103-210 445-563 (687)
87 2wg3_C Hedgehog-interacting pr 97.7 6.3E-06 2.2E-10 69.8 0.1 79 105-205 378-457 (463)
88 1n1i_A Merozoite surface prote 97.7 0.00023 8E-09 46.7 7.5 70 131-202 20-94 (105)
89 1ob1_C Major merozoite surface 97.5 0.00023 7.7E-09 46.4 5.9 70 131-202 14-93 (99)
90 1a3p_A Epidermal growth factor 97.4 0.00019 6.6E-09 40.1 3.6 33 54-92 2-40 (45)
91 1gl4_A Nidogen-1, entactin; im 97.3 2.4E-05 8.3E-10 61.3 -0.4 45 50-96 3-48 (285)
92 1szb_A Mannose binding lectin- 97.3 0.00015 5.1E-09 52.8 3.4 53 148-204 113-168 (170)
93 3ca7_A Protein spitz; argos, E 97.3 2.5E-05 8.4E-10 45.3 -0.9 41 142-203 3-48 (52)
94 1g1s_A P-selectin; selectin, l 97.2 0.0001 3.5E-09 53.2 1.9 41 163-209 120-161 (162)
95 2wph_E Coagulation factor IXA 97.2 0.00017 5.7E-09 42.9 2.3 35 59-94 6-41 (59)
96 1hae_A Heregulin-alpha; growth 97.1 0.00028 9.7E-09 42.5 2.8 42 122-167 7-54 (63)
97 1szb_A Mannose binding lectin- 97.0 0.00053 1.8E-08 49.9 4.0 52 110-162 113-168 (170)
98 4aqs_A Laminin subunit beta-1; 96.9 0.0006 2.1E-08 58.6 4.0 58 19-83 407-469 (525)
99 3f1s_B Vitamin K-dependent pro 96.9 0.00049 1.7E-08 54.3 2.8 50 161-211 1-51 (283)
100 2wg3_C Hedgehog-interacting pr 96.8 0.00028 9.4E-09 59.7 0.8 76 37-160 378-454 (463)
101 2p28_B Integrin beta-2; hybrid 96.6 0.0015 5.3E-08 49.4 3.7 88 60-159 96-212 (217)
102 1nql_B Epidermal growth factor 96.5 0.0012 4E-08 38.2 1.8 29 171-203 13-44 (53)
103 1g1s_A P-selectin; selectin, l 96.3 0.0018 6.2E-08 46.5 2.4 41 123-167 121-161 (162)
104 1nzi_A Complement C1S componen 96.2 0.0038 1.3E-07 44.6 3.9 45 158-203 113-158 (159)
105 1klo_A Laminin; glycoprotein; 96.0 0.006 2.1E-07 43.9 4.0 27 62-92 3-33 (162)
106 1nql_B Epidermal growth factor 95.8 0.0056 1.9E-07 35.3 2.3 27 62-92 14-43 (53)
107 3v64_C Agrin; beta propeller, 95.7 0.0034 1.2E-07 50.9 1.6 41 52-94 1-41 (349)
108 3e50_C Protransforming growth 95.6 0.012 3.9E-07 33.4 3.2 34 170-207 14-49 (50)
109 3ltf_D Protein spitz; receptor 95.6 0.0042 1.4E-07 36.6 1.3 29 172-204 16-49 (58)
110 3ca7_A Protein spitz; argos, E 95.5 0.003 1E-07 36.3 0.6 26 131-160 18-47 (52)
111 3v64_C Agrin; beta propeller, 95.5 0.0085 2.9E-07 48.5 3.4 42 122-164 2-43 (349)
112 1nzi_A Complement C1S componen 95.4 0.013 4.6E-07 41.7 3.9 50 110-160 106-157 (159)
113 3f1s_B Vitamin K-dependent pro 95.4 0.006 2E-07 48.0 2.1 47 52-99 2-49 (283)
114 1q4g_A Prostaglandin G/H synth 95.0 0.014 4.8E-07 50.3 3.3 36 52-93 2-40 (553)
115 3cfw_A L-selectin; EGF, cell a 94.8 0.02 6.8E-07 41.0 3.1 34 172-209 127-161 (164)
116 3sov_A LRP-6, low-density lipo 94.7 0.028 9.7E-07 44.9 4.1 42 162-204 267-310 (318)
117 1ijq_A LDL receptor, low-densi 94.7 0.024 8.1E-07 45.1 3.6 41 161-202 266-315 (316)
118 1iox_A Betacellulin; EGF-like 94.5 0.025 8.7E-07 32.0 2.5 30 171-204 15-46 (50)
119 3nt1_A Prostaglandin-endoperox 94.3 0.029 9.8E-07 48.7 3.6 36 52-93 1-39 (587)
120 4a0p_A LRP6, LRP-6, low-densit 94.3 0.024 8.3E-07 49.7 3.1 43 161-204 264-307 (628)
121 2fd6_A Urokinase-type plasmino 94.3 0.042 1.4E-06 37.5 3.7 41 172-216 3-50 (122)
122 1n1i_A Merozoite surface prote 94.1 0.15 5.1E-06 33.4 5.8 61 62-150 18-83 (105)
123 2rnl_A Amphiregulin; AR, color 93.8 0.065 2.2E-06 30.3 3.2 37 162-202 9-48 (50)
124 1xdt_R Hbegf, heparin-binding 93.8 0.031 1.1E-06 34.8 2.0 38 162-203 37-77 (79)
125 1ob1_C Major merozoite surface 93.7 0.076 2.6E-06 34.5 3.8 62 62-150 12-82 (99)
126 1klo_A Laminin; glycoprotein; 93.1 0.048 1.6E-06 39.2 2.5 22 19-40 18-40 (162)
127 3s94_A LRP-6, low-density lipo 92.6 0.048 1.7E-06 47.7 2.2 41 162-203 578-618 (619)
128 2fd6_A Urokinase-type plasmino 92.5 0.18 6E-06 34.3 4.5 53 62-118 3-62 (122)
129 3e50_C Protransforming growth 92.2 0.12 4.1E-06 29.2 2.8 30 128-161 14-45 (50)
130 1b9w_A Protein (merozoite surf 92.0 0.93 3.2E-05 28.9 6.9 61 131-193 14-79 (95)
131 3sov_A LRP-6, low-density lipo 91.9 0.16 5.4E-06 40.5 4.3 42 52-94 267-310 (318)
132 3ltf_D Protein spitz; receptor 91.9 0.074 2.5E-06 31.1 1.7 28 62-93 16-48 (58)
133 3cfw_A L-selectin; EGF, cell a 91.6 0.12 4E-06 36.8 2.9 38 54-97 121-159 (164)
134 4a0p_A LRP6, LRP-6, low-densit 91.4 0.13 4.4E-06 45.1 3.5 42 51-93 264-306 (628)
135 2rnl_A Amphiregulin; AR, color 91.4 0.23 7.8E-06 28.0 3.4 29 128-160 18-48 (50)
136 1ijq_A LDL receptor, low-densi 91.2 0.16 5.6E-06 40.1 3.7 41 51-92 266-315 (316)
137 3zyj_B Netrin-G1; cell adhesio 90.9 0.082 2.8E-06 43.9 1.7 25 20-44 314-338 (426)
138 1q4g_A Prostaglandin G/H synth 90.7 0.13 4.5E-06 44.3 2.8 35 122-160 3-39 (553)
139 1iox_A Betacellulin; EGF-like 90.6 0.19 6.6E-06 28.3 2.6 29 128-160 14-44 (50)
140 3zyj_B Netrin-G1; cell adhesio 90.5 0.25 8.7E-06 41.0 4.2 94 65-182 304-412 (426)
141 1g1t_A E-selectin; EGF, adhesi 90.2 0.094 3.2E-06 37.0 1.3 34 163-202 120-154 (157)
142 3s94_A LRP-6, low-density lipo 89.0 0.41 1.4E-05 41.9 4.6 41 162-203 272-314 (619)
143 1xdt_R Hbegf, heparin-binding 88.4 0.21 7.2E-06 31.0 1.7 23 62-84 48-72 (79)
144 3asi_A Neurexin-1-alpha; beta- 88.1 0.42 1.4E-05 39.4 3.9 36 162-203 185-222 (410)
145 3nt1_A Prostaglandin-endoperox 88.0 0.26 9E-06 42.7 2.7 35 122-160 2-38 (587)
146 1g1t_A E-selectin; EGF, adhesi 86.3 0.31 1.1E-05 34.2 1.9 20 64-83 130-149 (157)
147 2i9a_A Urokinase-type plasmino 84.6 0.87 3E-05 31.9 3.5 41 172-216 15-62 (145)
148 3asi_A Neurexin-1-alpha; beta- 83.3 1 3.4E-05 37.1 3.9 39 49-93 181-222 (410)
149 2ygo_A WIF-1, WNT inhibitory f 80.0 1.5 5E-05 32.1 3.2 25 172-203 155-180 (188)
150 3qcw_A Neurexin-1-alpha; synap 75.9 2 7E-05 40.7 3.8 35 163-203 1018-1054(1245)
151 2i9a_A Urokinase-type plasmino 73.2 12 0.00042 25.9 6.4 33 131-167 17-54 (145)
152 3qcw_A Neurexin-1-alpha; synap 72.0 2.8 9.6E-05 39.8 3.7 36 162-203 619-656 (1245)
153 4aqt_A Laminin subunit gamma-1 71.0 5.6 0.00019 32.4 4.9 37 20-56 273-309 (375)
154 3dem_A Complement factor MAsp- 67.2 4.6 0.00016 31.0 3.5 41 161-202 120-163 (278)
155 1nt0_A MAsp2, mannose-binding 63.6 4.2 0.00014 31.5 2.6 41 161-202 119-162 (286)
156 3fby_A COMP, cartilage oligome 57.0 9.5 0.00033 32.6 3.8 38 162-201 18-58 (551)
157 1nt0_A MAsp2, mannose-binding 50.5 11 0.00038 29.1 3.1 50 110-160 109-162 (286)
158 2ygo_A WIF-1, WNT inhibitory f 46.8 12 0.00041 27.2 2.5 23 131-160 157-179 (188)
159 2y38_A Laminin subunit alpha-5 42.3 41 0.0014 27.6 5.3 26 20-45 287-312 (403)
160 4aqt_A Laminin subunit gamma-1 40.5 2.9 0.0001 34.1 -1.8 14 185-202 335-349 (375)
161 3ssb_I IMPI alpha, inducible m 40.2 20 0.00068 17.8 2.0 22 143-165 6-27 (32)
162 3fl7_A Ephrin receptor; ATP-bi 37.1 13 0.00046 31.7 1.7 58 18-85 262-321 (536)
163 3fby_A COMP, cartilage oligome 35.5 32 0.0011 29.4 3.7 24 61-84 28-53 (551)
164 2p3f_N Anti-coagulant protein 35.1 11 0.00039 23.0 0.7 27 185-211 48-74 (78)
165 3dem_A Complement factor MAsp- 34.4 23 0.00078 27.0 2.5 31 61-92 133-163 (278)
166 2e26_A Reelin, reeler protein; 31.7 12 0.00042 33.1 0.6 43 145-202 521-564 (725)
167 1ccv_A AMCI, chymotrypsin inhi 26.6 32 0.0011 19.2 1.7 21 143-164 35-55 (56)
168 3t5o_A Complement component C6 21.2 87 0.003 28.6 4.2 40 162-208 497-537 (913)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.84 E-value=2.2e-20 Score=133.26 Aligned_cols=124 Identities=36% Similarity=0.914 Sum_probs=94.7
Q ss_pred CCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC
Q psy11800 49 DLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN 127 (220)
Q Consensus 49 C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~ 127 (220)
|++||+|...+.+| .++.|+++.++|+|.|++||. +..|+ .++++|...
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~--------------------------~~~~~C~~~ 51 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE--------------------------IDVNECVSN 51 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC--------------------------EECCTTTTC
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCccc--------------------------ccCccCCCC
Confidence 67899999544459 669999999999999999998 44553 123555444
Q ss_pred CCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC-cC
Q psy11800 128 GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV-DR 204 (220)
Q Consensus 128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~ 204 (220)
.+-.+++|++..++|+|.|++|| .|..| .++++|...+ |.+ ++|++..++|.|.|++||. |..|+ ++
T Consensus 52 ~C~~~~~C~~~~g~~~C~C~~G~----~G~~C~~~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~i 121 (135)
T 2vj3_A 52 PCQNDATCLDQIGEFQCICMPGY----EGVHCEVNTDECASSP--CLHNGRCLDKINEFQCECPTGFT----GHLCQVDL 121 (135)
T ss_dssp CCCSSCEEEECSSCEEEECCTTE----ESSSSCEECCTTTTCC--STTTCEEEECSSCEEEECCTTEE----SSSSCEEC
T ss_pred CCCCCCEEeCCCCCceeeCCCCC----cCCcceecCCcccCCC--cCCCCEeECCCCCeEEECCCCCc----CCccCccC
Confidence 33345799999999999999999 67788 4899998766 986 8999999999999999999 89996 89
Q ss_pred CCCCCCCC
Q psy11800 205 DECRTPGG 212 (220)
Q Consensus 205 ~~C~~~~~ 212 (220)
++|+..++
T Consensus 122 ~~C~~~~~ 129 (135)
T 2vj3_A 122 HHILDAQK 129 (135)
T ss_dssp C-------
T ss_pred ccccCCCc
Confidence 99987653
No 2
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.79 E-value=3.2e-20 Score=136.46 Aligned_cols=137 Identities=35% Similarity=0.744 Sum_probs=105.4
Q ss_pred CCCCccCC-CCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc--ccCCC---------------C----CCccc
Q psy11800 50 LNVDECYE-NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE--CRTPG---------------D----HDECS 107 (220)
Q Consensus 50 ~~i~~C~~-~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~--C~~~~---------------~----~~~C~ 107 (220)
+|||||.. ++ |.+++|+++.++|+|.|++||++..+++.|+++++ |.... . .+.|.
T Consensus 1 ~dideC~~~~~--C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~ 78 (162)
T 1uzk_A 1 TDVNECLDPTT--CISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC 78 (162)
T ss_dssp CCCCGGGSTTS--SBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred CccccCCCCCC--CCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence 47899984 55 86789999999999999999998878899998776 65321 0 35566
Q ss_pred cccccccccccccccccCCCCCCCCceEe-cCCCCeEeecCC--CcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCe
Q psy11800 108 QKKKKKKKKKKLYHDECSQNGMCANGMCI-NMDGSFKCQCKP--GFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSY 184 (220)
Q Consensus 108 c~~~~~~~~~~~~~~~C~~~~~c~~~~C~-~~~~~~~C~C~~--G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~ 184 (220)
|..||... ++|. .|. +..+.|+|.|++ ||++...+..|++||+|...+..|.+++|+++.++|
T Consensus 79 C~~G~~~~------~~C~--------~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy 144 (162)
T 1uzk_A 79 CSLGKAWG------TPCE--------MCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSF 144 (162)
T ss_dssp TTTCCEET------TTTE--------ECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCE
T ss_pred CCCCCCcC------CCcc--------cCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCE
Confidence 66666521 1221 122 245678999988 998876677889999998766669878999999999
Q ss_pred EEeCCCCCccCCCCCCCC
Q psy11800 185 RCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 185 ~C~C~~G~~~~~~g~~C~ 202 (220)
+|.|++||.+..+++.|+
T Consensus 145 ~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 145 QCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp EEECCTTCCBCTTTCBBC
T ss_pred EeeCCCCccCCCCCCccC
Confidence 999999999887777763
No 3
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.79 E-value=2e-20 Score=135.43 Aligned_cols=135 Identities=29% Similarity=0.677 Sum_probs=103.1
Q ss_pred CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800 50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM 129 (220)
Q Consensus 50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~ 129 (220)
++||+|..+| |.+++|+++.++|+|.|++||++...+..|.+.. ...|..++.+..|+..+++|....
T Consensus 2 ~dideC~~~p--C~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~---------~~~C~~~~~g~~C~~~~~~c~~~~- 69 (147)
T 2w86_A 2 ADIDECESSP--CINGVCKNSPGSFICECSSESTLDPTKTICIETI---------KGTCWQTVIDGRCEININGATLKS- 69 (147)
T ss_dssp CCCCGGGGCC--SBTSEEEEETTEEEEECCTTEEECTTSSBEEECC---------CEEEEEEEETTEEEEEEEEEECHH-
T ss_pred CcCccCcCCC--CCCCEeECCCCCEEeECCCCcccCCCCCeecCCC---------CCcccCCCCCCccccCCCccccCC-
Confidence 4789999877 9668999999999999999999876666776542 124455666777776666653221
Q ss_pred CCCceEecCCC----------CeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800 130 CANGMCINMDG----------SFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG 199 (220)
Q Consensus 130 c~~~~C~~~~~----------~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~ 199 (220)
.|.+..+ .|.|.|++||++. .+..|++||+|+..++.|.+++|+++.++|+|.|++||.+..+++
T Consensus 70 ----~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~-~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~ 144 (147)
T 2w86_A 70 ----QCCSSLGAAWGSPCTLCQVDPICGKGYSRI-KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGR 144 (147)
T ss_dssp ----HHHTTTCSEETTTTEECCCCTTTCTTEEEE-ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSS
T ss_pred ----ccccCcCcccCCCcccCCCcccCCCccccC-CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCC
Confidence 1112211 2678999999763 588999999999777779888999999999999999999888777
Q ss_pred CC
Q psy11800 200 FC 201 (220)
Q Consensus 200 ~C 201 (220)
.|
T Consensus 145 ~C 146 (147)
T 2w86_A 145 IC 146 (147)
T ss_dssp CB
T ss_pred ee
Confidence 76
No 4
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.74 E-value=1.5e-18 Score=130.31 Aligned_cols=129 Identities=24% Similarity=0.538 Sum_probs=103.5
Q ss_pred CCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccC---------------CC-----CCCccccccccccccccccc
Q psy11800 62 CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT---------------PG-----DHDECSQKKKKKKKKKKLYH 121 (220)
Q Consensus 62 C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~---------------~~-----~~~~C~c~~~~~~~~~~~~~ 121 (220)
|.+++|+++.++|+|.|++||.+. ++..|+++++|.. .. ..+.|.|..||.+..+...+
T Consensus 13 C~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~ 91 (186)
T 1z1y_A 13 CXNGQLVQMSNHFXCMCNEGLVHL-SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVL 91 (186)
T ss_dssp CBTEEEEECSSCEEEEECTTEEEE-ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEE
T ss_pred CCCCEeECCCCCeEeECCCCCccC-CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCC
Confidence 877899999999999999999865 3456777666652 12 35789999999998665557
Q ss_pred cccCCCCCCCCceEe----cCCCCeEeecCCCcEeCC-CCCceeec--CcCCCCCCCC-CC-CeEecCCCCeEEeCCCCC
Q psy11800 122 DECSQNGMCANGMCI----NMDGSFKCQCKPGFVLSP-TGHACIDV--DECYENPLIC-LN-GRCDNTLGSYRCACQPGY 192 (220)
Q Consensus 122 ~~C~~~~~c~~~~C~----~~~~~~~C~C~~G~~~~~-~g~~C~~i--~~C~~~~~~C-~~-~~C~~~~~~~~C~C~~G~ 192 (220)
++|....+-.+++|+ +..++|+|.|++||.+.. ++..|.++ ++|.. .| .+ ++|+++.++|+|.|++||
T Consensus 92 d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~ 168 (186)
T 1z1y_A 92 DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNVEGVYXCQCMEGF 168 (186)
T ss_dssp GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEETTEEEEEECTTC
T ss_pred CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc---cccccCcceecCCCCeeeECCCCC
Confidence 899766533468998 888899999999998754 56889765 89973 49 65 899999999999999999
Q ss_pred cc
Q psy11800 193 SP 194 (220)
Q Consensus 193 ~~ 194 (220)
.+
T Consensus 169 ~g 170 (186)
T 1z1y_A 169 TF 170 (186)
T ss_dssp EE
T ss_pred cc
Confidence 83
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.74 E-value=8.5e-18 Score=120.95 Aligned_cols=117 Identities=34% Similarity=0.762 Sum_probs=92.4
Q ss_pred C-CCCeeeeCCCceEeeCCCCCccCC-----CCCCccCCCcccCCCCCCccccccccccccccccccccCCC--CCCC-C
Q psy11800 62 C-LNGRCDNTLGSYRCACQPGYSPSP-----DGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN--GMCA-N 132 (220)
Q Consensus 62 C-~~~~C~~~~g~~~C~C~~g~~~~~-----~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~--~~c~-~ 132 (220)
| .+++|++. |+|.|++||++.. ++..|+++ ++|... ..|. +
T Consensus 9 C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~di---------------------------deC~~~~~~~C~~~ 58 (143)
T 2bou_A 9 CPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDI---------------------------NECATLSKVSCGKF 58 (143)
T ss_dssp CCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEEC---------------------------CGGGC----CCCTT
T ss_pred CCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCcc---------------------------ccccCCCCCCCCCC
Confidence 7 56899874 8999999999642 23456555 455433 2454 5
Q ss_pred ceEecCCCCeEeecCCCcEeCCC--------CCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 133 GMCINMDGSFKCQCKPGFVLSPT--------GHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 133 ~~C~~~~~~~~C~C~~G~~~~~~--------g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
++|++..++|+|.|++||.+... +..|.+|++|...+..|.+ ++|+++.++|+|.|++||.+..+++.|++
T Consensus 59 ~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 59 SDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp EEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred CEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 79999999999999999988632 4589999999875556985 89999999999999999998888899998
Q ss_pred CCCCC
Q psy11800 204 RDECR 208 (220)
Q Consensus 204 ~~~C~ 208 (220)
+++|+
T Consensus 139 ~~~C~ 143 (143)
T 2bou_A 139 DTVCE 143 (143)
T ss_dssp TCCBC
T ss_pred CCccC
Confidence 88874
No 6
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.72 E-value=5.1e-17 Score=116.86 Aligned_cols=122 Identities=30% Similarity=0.752 Sum_probs=89.6
Q ss_pred CccCCCCCCC-CCCeeeeCC--CceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800 53 DECYENPLIC-LNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM 129 (220)
Q Consensus 53 ~~C~~~~~~C-~~~~C~~~~--g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~ 129 (220)
|+|..+| | ++++|++.. ++|+|.|++||+ +..|+...++... ......+++|....+
T Consensus 1 d~C~~~p--C~~~g~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~--------------~~~c~~~~~C~~~~C 60 (143)
T 4d90_A 1 DICDPNP--CENGGICLPGLADGSFSCECPDGFT----DPNCSSVVEVASD--------------EEEPTSAGPCTPNPC 60 (143)
T ss_dssp --CCSCC--CGGGCEEEC-----CCEEECCTTCC----TTTTCSCCCCTTT--------------TTSCCCCCTTSSCCC
T ss_pred CcCCCCc--CCCCCEeeCCCCCCCEEeECCCCCC----CCCCccCcccccc--------------ccccccCCcCCCCCC
Confidence 4677777 9 669999876 689999999998 5667665443221 111123467755444
Q ss_pred CCCceEe-------cCCCCeEeecCCCcEeCCCCCcee-ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCC
Q psy11800 130 CANGMCI-------NMDGSFKCQCKPGFVLSPTGHACI-DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGF 200 (220)
Q Consensus 130 c~~~~C~-------~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~ 200 (220)
.++++|+ +..++|+|.|++|| .|..|. ++++|...+ |.+ ++|+++.++|.|.|++||. |+.
T Consensus 61 ~~~g~C~~~~~~~~~~~~~~~C~C~~G~----~G~~C~~~i~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~ 130 (143)
T 4d90_A 61 HNGGTCEISEAYRGDTFIGYVCKCPRGF----NGIHCQHNINECEVEP--CKNGGICTDLVANYSCECPGEFM----GRN 130 (143)
T ss_dssp CTTCEEEECCCEETTEECCEEEECCTTE----ESTTSCEECCTTTTCC--SCTTCEEEEETTEEEEECCTTCB----STT
T ss_pred CCCCEecCCCccccCCCCCeEeECcCCC----cCCCcccCCCcCCCCC--CCCCCEeECCCCCeEeECCCCCc----cCC
Confidence 4568998 66678999999999 788995 999998776 986 8999999999999999999 888
Q ss_pred CCcC
Q psy11800 201 CVDR 204 (220)
Q Consensus 201 C~~~ 204 (220)
|+..
T Consensus 131 c~~~ 134 (143)
T 4d90_A 131 CQYK 134 (143)
T ss_dssp SCBC
T ss_pred ceec
Confidence 8643
No 7
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.72 E-value=3.9e-17 Score=141.68 Aligned_cols=129 Identities=29% Similarity=0.699 Sum_probs=99.9
Q ss_pred CCCCccCCCCCCC-CCCeeeeCCC-ceEe-eCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCC
Q psy11800 50 LNVDECYENPLIC-LNGRCDNTLG-SYRC-ACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQ 126 (220)
Q Consensus 50 ~~i~~C~~~~~~C-~~~~C~~~~g-~~~C-~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~ 126 (220)
++|++|..+| | +++.|+++.+ +|+| .|++||++ +++.|+.+++|..
T Consensus 1 ~DIDeC~~nP--C~~gg~C~n~~~Gsy~C~~C~~GytG--dg~~CeDiDEC~~--------------------------- 49 (634)
T 1yo8_A 1 ADPDGCLSNP--CFPGAQCSSFPDGSWSCGFCPVGFLG--NGTHCEDLDECAL--------------------------- 49 (634)
T ss_dssp ---CGGGGCC--SCTTCCEEECTTSCEEECCCCTTBCS--CSSSCCBCCTTTT---------------------------
T ss_pred CcccccCCCC--CCCCCEEecCCCCCeECCcCCCccCC--CCCCccccccccC---------------------------
Confidence 3689998777 9 5689999985 5999 99999985 3578877755532
Q ss_pred CC-CCC-Cc---eEecCCCCeEee-cCCCcEeCC-----------CCCceeecCcCCCCCCCCCC-CeEecCC----CCe
Q psy11800 127 NG-MCA-NG---MCINMDGSFKCQ-CKPGFVLSP-----------TGHACIDVDECYENPLICLN-GRCDNTL----GSY 184 (220)
Q Consensus 127 ~~-~c~-~~---~C~~~~~~~~C~-C~~G~~~~~-----------~g~~C~~i~~C~~~~~~C~~-~~C~~~~----~~~ 184 (220)
.+ .|. ++ +|++..++|+|. |++||.+.. .+..|.++++|...++.|.+ ++|+++. ++|
T Consensus 50 ~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY 129 (634)
T 1yo8_A 50 VPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMY 129 (634)
T ss_dssp SCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSE
T ss_pred CCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccce
Confidence 22 243 45 899999999998 999998753 34569999999976667985 8999998 999
Q ss_pred EEeCCCCCccCCCCCCCC---cCCCCCCCC
Q psy11800 185 RCACQPGYSPSPDGGFCV---DRDECRTPG 211 (220)
Q Consensus 185 ~C~C~~G~~~~~~g~~C~---~~~~C~~~~ 211 (220)
+|.|++||. .++..|+ ++++|....
T Consensus 130 ~C~C~~Gy~--GdG~~Ce~d~DiDeC~~~~ 157 (634)
T 1yo8_A 130 KCECQTGYA--GDGLICGEDSDLDGWPNLN 157 (634)
T ss_dssp EEEECTTEE--ESSSSEEECTTSSSSCSSC
T ss_pred eeeccCCcc--ccCcccccccCcccccCCC
Confidence 999999998 3468896 788886544
No 8
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.68 E-value=1.5e-17 Score=115.64 Aligned_cols=115 Identities=31% Similarity=0.850 Sum_probs=85.0
Q ss_pred CCCCccCCCCCCCCCCeeeeC-CCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCC
Q psy11800 50 LNVDECYENPLICLNGRCDNT-LGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNG 128 (220)
Q Consensus 50 ~~i~~C~~~~~~C~~~~C~~~-~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~ 128 (220)
++||+|..+| |.+ +|+++ .++|+|.|++||.+... ++++|.. +|. ..
T Consensus 2 ~dideC~~~p--C~~-~C~~~~~g~y~C~C~~Gy~g~~~-----~~~~C~~-----------------------~C~-~~ 49 (118)
T 1dx5_I 2 EPVDPCFRAN--CEY-QCQPLDQTSYLCVCAEGFAPIPH-----EPHRCQM-----------------------FCN-QT 49 (118)
T ss_dssp CCCCGGGGCC--CSS-EEEECSSSCEEEECCTTEEEETT-----EEEEEEE-----------------------CCC-SS
T ss_pred CccccCCCCC--CCC-CCCCCCCCCEEeECCCCccccCC-----CCCcccc-----------------------ccC-CC
Confidence 3689998777 865 99999 89999999999986421 1222211 121 12
Q ss_pred CCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC-CCCC
Q psy11800 129 MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD-GGFC 201 (220)
Q Consensus 129 ~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~-g~~C 201 (220)
.|. ++|++ .++|+|.|++||.+.. +..|++||+|... ..| +++|+++.++|+|.|++||.+..+ ++.|
T Consensus 50 ~C~-~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~~-~~C-~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 50 ACP-ADCDP-NTQASCECPEGYILDD-GFICTDIDECENG-GFC-SGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp EEE-CEECT-TSTTCEECCTTEEEET-TTEEEECCHHHHC-SSC-SSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCC-CcccC-CCCeEeECCCCccCCC-CCccccccccCCC-CCC-cCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 222 47877 4889999999997754 8899999999872 348 679999999999999999986554 4443
No 9
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.57 E-value=4e-15 Score=97.49 Aligned_cols=82 Identities=43% Similarity=1.013 Sum_probs=68.7
Q ss_pred cccccCCC-CCCCCceEecCCCCeEeecCCCcEeCC-CCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800 120 YHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSP-TGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 197 (220)
Q Consensus 120 ~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~-~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~ 197 (220)
++|+|... ..|.+++|++..++|+|.|++||.+.. .+..|.+||+|...+..|.+++|+++.++|.|.|++||.+..+
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSS
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCC
Confidence 45777654 346677999999999999999998753 4789999999998776677689999999999999999998777
Q ss_pred CCCC
Q psy11800 198 GGFC 201 (220)
Q Consensus 198 g~~C 201 (220)
++.|
T Consensus 82 ~~~C 85 (86)
T 1lmj_A 82 ISAC 85 (86)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 7766
No 10
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.54 E-value=1.9e-14 Score=93.33 Aligned_cols=75 Identities=43% Similarity=1.116 Sum_probs=62.2
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 197 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~ 197 (220)
++++|.....|.+++|++..++|+|.|++||.+ .+..|.+||+|... ..|.+++|+++.++|.|.|++||.+..+
T Consensus 4 dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~~-~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp CCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGTC-CTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred ccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccCC-CCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 457776544566789999999999999999976 58899999999842 2488789999999999999999996544
No 11
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.53 E-value=2.3e-14 Score=101.91 Aligned_cols=106 Identities=31% Similarity=0.737 Sum_probs=75.7
Q ss_pred CCCccccccCCCCCCCCC-CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccc
Q psy11800 33 TQTYTGLSDSLSLGVSDL-NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKK 110 (220)
Q Consensus 33 ~~~~~~~~~~~~~g~~C~-~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~ 110 (220)
...|.+.+..+|.|..|+ ++++|..++ | .++.|++..++|+|.|++||. +..|+.
T Consensus 25 ~g~~~C~C~~Gy~G~~C~~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~----------------- 81 (135)
T 2vj3_A 25 LGSFECQCLQGYTGPRCEIDVNECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHCEV----------------- 81 (135)
T ss_dssp SSSEEEECCTTEESTTSCEECCTTTTCC--CCSSCEEEECSSCEEEECCTTEE----SSSSCE-----------------
T ss_pred CCCEEEECCCCCcCCcccccCccCCCCC--CCCCCEEeCCCCCceeeCCCCCc----CCccee-----------------
Confidence 345788888899999994 899999877 8 568999999999999999998 445541
Q ss_pred ccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCCCCCCCCCC
Q psy11800 111 KKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECYENPLICLN 174 (220)
Q Consensus 111 ~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~~~~~C~~ 174 (220)
++++|....+-.+++|++..+.|+|.|++|| .|..| .+|++|...++.|++
T Consensus 82 ---------~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~----~G~~C~~~i~~C~~~~~~c~~ 133 (135)
T 2vj3_A 82 ---------NTDECASSPCLHNGRCLDKINEFQCECPTGF----TGHLCQVDLHHILDAQKMVWN 133 (135)
T ss_dssp ---------ECCTTTTCCSTTTCEEEECSSCEEEECCTTE----ESSSSCEECC-----------
T ss_pred ---------cCCcccCCCcCCCCEeECCCCCeEEECCCCC----cCCccCccCccccCCCcceee
Confidence 1245544333345899999999999999999 67889 689999887765653
No 12
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.52 E-value=1e-14 Score=95.75 Aligned_cols=83 Identities=35% Similarity=0.799 Sum_probs=68.6
Q ss_pred cccccCCCCC-CCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeC--CCCCccCC
Q psy11800 120 YHDECSQNGM-CANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCAC--QPGYSPSP 196 (220)
Q Consensus 120 ~~~~C~~~~~-c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C--~~G~~~~~ 196 (220)
++++|...+. |.+++|++..++|+|.|++||.+.+.+..|.+|++|..++ |. ++|+++.++|.|.| ..||.+..
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~--C~-~~C~n~~g~y~C~C~g~~G~~~~~ 78 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENM--CA-QLCVNYPGGYTCYCDGKKGFKLAQ 78 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSC--CS-SEECCCSSSCCEECCSSSCCBCCT
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCC--CC-CEEEccCCCEEEECCCCcCCcccC
Confidence 3577766542 5668999999999999999998877789999999998765 87 69999999999999 58888777
Q ss_pred CCCCCCcCC
Q psy11800 197 DGGFCVDRD 205 (220)
Q Consensus 197 ~g~~C~~~~ 205 (220)
+++.|++|+
T Consensus 79 ~~~~C~di~ 87 (87)
T 1z6c_A 79 DQKSCEVVS 87 (87)
T ss_dssp TSSSCBCCC
T ss_pred CCCcceECc
Confidence 777777653
No 13
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.51 E-value=1.5e-14 Score=103.80 Aligned_cols=101 Identities=29% Similarity=0.591 Sum_probs=70.7
Q ss_pred CCCCCCCCccCCCC-CCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccc
Q psy11800 46 GVSDLNVDECYENP-LIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDE 123 (220)
Q Consensus 46 g~~C~~i~~C~~~~-~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~ 123 (220)
+..|++|++|.... ..| .++.|+++.++|+|.|++||.+......+.. ..+..| .++++
T Consensus 38 ~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~------------------~~~~~C-~dide 98 (143)
T 2bou_A 38 METCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN------------------ESENTC-QDVDE 98 (143)
T ss_dssp TCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSS------------------GGGCCE-EECCH
T ss_pred CCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcccccc------------------CCCCCc-CCccC
Confidence 36899999999752 248 5689999999999999999997543221110 011111 23466
Q ss_pred cCC-CCCCC-CceEecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800 124 CSQ-NGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165 (220)
Q Consensus 124 C~~-~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C 165 (220)
|.. ...|. +++|++..++|+|.|++||.+...++.|.++++|
T Consensus 99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp HHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred ccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence 653 23454 5799999999999999999888777778777766
No 14
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.48 E-value=2.9e-13 Score=117.58 Aligned_cols=109 Identities=28% Similarity=0.650 Sum_probs=84.0
Q ss_pred ccc-cccCCCCC--CCCCCCCccCCCCCCC-CCC---eeeeCCCceEee-CCCCCccCC-----------CCCCccCCCc
Q psy11800 36 YTG-LSDSLSLG--VSDLNVDECYENPLIC-LNG---RCDNTLGSYRCA-CQPGYSPSP-----------DGGFCVDRDE 96 (220)
Q Consensus 36 ~~~-~~~~~~~g--~~C~~i~~C~~~~~~C-~~~---~C~~~~g~~~C~-C~~g~~~~~-----------~~~~C~~~~~ 96 (220)
|.| .|..+|.| ..|+++++|..+++.| .++ +|+++.++|+|. |++||.+.. +++.|..
T Consensus 25 y~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d--- 101 (634)
T 1yo8_A 25 WSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP--- 101 (634)
T ss_dssp EEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE---
T ss_pred eECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccc---
Confidence 777 78788877 7899999999888889 556 899999999998 999998542 1222333
Q ss_pred ccCCCCCCccccccccccccccccccccCCC-CCCC-CceEecCC----CCeEeecCCCcEeCCCCCcee---ecCcCCC
Q psy11800 97 CRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMCA-NGMCINMD----GSFKCQCKPGFVLSPTGHACI---DVDECYE 167 (220)
Q Consensus 97 C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c~-~~~C~~~~----~~~~C~C~~G~~~~~~g~~C~---~i~~C~~ 167 (220)
+++|... ..|. +++|++.. ++|+|.|++||.+ .+..|. ++++|..
T Consensus 102 ------------------------ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiDeC~~ 155 (634)
T 1yo8_A 102 ------------------------ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLDGWPN 155 (634)
T ss_dssp ------------------------CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSSSSCS
T ss_pred ------------------------cccccCCCcccccCccccccccccccceeeeccCCccc--cCcccccccCcccccC
Confidence 4666542 3454 57999998 8999999999976 567895 7899976
Q ss_pred CCCCCC
Q psy11800 168 NPLICL 173 (220)
Q Consensus 168 ~~~~C~ 173 (220)
....|.
T Consensus 156 ~~~~C~ 161 (634)
T 1yo8_A 156 LNLVCA 161 (634)
T ss_dssp SCCTTT
T ss_pred CCCccc
Confidence 665665
No 15
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.47 E-value=4.6e-14 Score=92.38 Aligned_cols=83 Identities=41% Similarity=0.964 Sum_probs=64.6
Q ss_pred CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCC-CCCCccCCCcccCCCCCCccccccccccccccccccccCCC-
Q psy11800 50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSP-DGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN- 127 (220)
Q Consensus 50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~-~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~- 127 (220)
++||+|..++..|.++.|+++.++|+|.|++||.+.. ++..|+++++ |...
T Consensus 1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dide---------------------------C~~~~ 53 (86)
T 1lmj_A 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDE---------------------------CQRDP 53 (86)
T ss_dssp CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCH---------------------------HHHCS
T ss_pred CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCccc---------------------------ccCCC
Confidence 3789999877779667999999999999999998642 3566766644 4333
Q ss_pred CCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800 128 GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159 (220)
Q Consensus 128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C 159 (220)
..|.+++|++..++|+|.|++||.+...++.|
T Consensus 54 ~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 54 LLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp STTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 23456799999999999999999876666554
No 16
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.45 E-value=9e-14 Score=90.09 Aligned_cols=78 Identities=50% Similarity=1.043 Sum_probs=60.7
Q ss_pred CCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC
Q psy11800 48 SDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN 127 (220)
Q Consensus 48 ~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~ 127 (220)
+|++||+|.. +..|.++.|+++.++|+|.|++||.+ ++..|.+++ +|...
T Consensus 1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~did---------------------------eC~~~ 50 (82)
T 1emn_A 1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTD---------------------------ECSVG 50 (82)
T ss_dssp CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECC---------------------------GGGTC
T ss_pred CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcc---------------------------cccCC
Confidence 4788999986 33486699999999999999999985 366776664 44433
Q ss_pred CCCCCceEecCCCCeEeecCCCcEeCCC
Q psy11800 128 GMCANGMCINMDGSFKCQCKPGFVLSPT 155 (220)
Q Consensus 128 ~~c~~~~C~~~~~~~~C~C~~G~~~~~~ 155 (220)
..|.+++|++..++|+|.|++||.+.+.
T Consensus 51 ~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 51 NPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp CTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred CCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 3455679999999999999999966433
No 17
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.40 E-value=1.6e-13 Score=98.59 Aligned_cols=83 Identities=27% Similarity=0.565 Sum_probs=68.4
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeE-ecCCCCeEEeCCCCCccCCCC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRC-DNTLGSYRCACQPGYSPSPDG 198 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C-~~~~~~~~C~C~~G~~~~~~g 198 (220)
++|+|..+++-++++|++..++|+|.|++|| .|..|.++++|...+..|.+ .| +++.++|.|.|++||.+..+|
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG 121 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGF----EGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQ 121 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSE----ESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTS
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCC----cCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCC
Confidence 3467765444345899999999999999999 68899888999876556876 89 999999999999999998899
Q ss_pred CCCCcCCCC
Q psy11800 199 GFCVDRDEC 207 (220)
Q Consensus 199 ~~C~~~~~C 207 (220)
+.|+++++.
T Consensus 122 ~~C~~~~~~ 130 (146)
T 1x7a_L 122 KSCKPAVPF 130 (146)
T ss_dssp SSEEECSSS
T ss_pred CcCCCCCCC
Confidence 999888764
No 18
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.40 E-value=1.3e-13 Score=101.63 Aligned_cols=117 Identities=27% Similarity=0.640 Sum_probs=84.8
Q ss_pred CCCeeeeCCCceEeeCCCCCccCCCCCCccCC---Cccc-CC---CCCCccccccccccccccccccccCCCCCCCCceE
Q psy11800 63 LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR---DECR-TP---GDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMC 135 (220)
Q Consensus 63 ~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~---~~C~-~~---~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C 135 (220)
.+++|.. ...|.|.+||++ ..|+.. ..|. .. .+.+.|.|..+|+|..|+ +|.....|.+++|
T Consensus 42 ~~g~C~~---~g~C~C~~G~~G----~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~----~C~~~~~C~~g~C 110 (169)
T 2vj2_A 42 GHYACDQ---NGNKTCMEGWMG----PECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD----KCIPHPGCVHGIC 110 (169)
T ss_dssp EEEEECS---SCCEEECTTEES----TTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSC----EECCCTTCSSEEC
T ss_pred CCCEeCC---CCeeECCCCCcC----CCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcc----cCCCCCCCCCCCc
Confidence 3467853 357899999984 344321 1121 11 125789999999998885 3555555777788
Q ss_pred ecCCCCeEeecCCCcEeCCCCCcee-ecCcCCCCCCCCCC-CeEecC-CCCeEEeCCCCCccCCCCCCCC
Q psy11800 136 INMDGSFKCQCKPGFVLSPTGHACI-DVDECYENPLICLN-GRCDNT-LGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 136 ~~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~~~~C~~-~~C~~~-~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
+ +.++|.|.+|| .|..|. ++++|... ..|.+ ++|+++ .++|+|.|++||. |..|+
T Consensus 111 ~---~~~~C~C~~G~----~G~~C~~~~~~C~~~-~~C~~~g~C~~~~~~~~~C~C~~G~~----G~~Ce 168 (169)
T 2vj2_A 111 N---EPWQCLCETNW----GGQLCDKDLNYCGTH-QPCLNGGTCSNTGPDKYQCSCPEGYS----GPNCE 168 (169)
T ss_dssp S---STTCCEECTTE----ETTTTCEESCHHHHT-CCCCTTCEEEECSTTCEEEECCTTCC----STTSC
T ss_pred C---CCCEEeCCCCC----CCCcccCCCCCCCCC-CCCCCCCEEcCCCCCCcEeECCCCCc----CcCcC
Confidence 7 46799999999 678895 89999751 24986 899996 7899999999998 88775
No 19
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.40 E-value=9.2e-14 Score=104.12 Aligned_cols=113 Identities=25% Similarity=0.638 Sum_probs=86.9
Q ss_pred CCccCCCcccCCCCCCccccccccccc---cccccccccCC---CCCCC-CceEecCC-----CCeEeecCCCcEeCCCC
Q psy11800 89 GFCVDRDECRTPGDHDECSQKKKKKKK---KKKLYHDECSQ---NGMCA-NGMCINMD-----GSFKCQCKPGFVLSPTG 156 (220)
Q Consensus 89 ~~C~~~~~C~~~~~~~~C~c~~~~~~~---~~~~~~~~C~~---~~~c~-~~~C~~~~-----~~~~C~C~~G~~~~~~g 156 (220)
..|.+. .|......+.|.|..||.+. .|. ++++|.. ...|. +++|++.. ++|+|.|++||.+. .
T Consensus 11 ~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~--~ 86 (186)
T 1z1y_A 11 TICXNG-QLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX--E 86 (186)
T ss_dssp CCCBTE-EEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE--T
T ss_pred CCCCCC-EeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC--C
Confidence 345533 56665667899999999987 554 7799973 33454 58999998 89999999999763 3
Q ss_pred CceeecCcCCCCCCCCCC-CeEe----cCCCCeEEeCCCCCccCC-CCCCCCcC--CCCC
Q psy11800 157 HACIDVDECYENPLICLN-GRCD----NTLGSYRCACQPGYSPSP-DGGFCVDR--DECR 208 (220)
Q Consensus 157 ~~C~~i~~C~~~~~~C~~-~~C~----~~~~~~~C~C~~G~~~~~-~g~~C~~~--~~C~ 208 (220)
..|. +++|...+ |.+ +.|+ ++.++|.|.|++||.+.. ++..|+++ ++|.
T Consensus 87 ~~C~-~d~C~~~~--C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~ 143 (186)
T 1z1y_A 87 DTCV-LDVCQYXN--CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ 143 (186)
T ss_dssp TEEE-EGGGTTCC--CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC
T ss_pred CCCC-CCcCcCCC--CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc
Confidence 3665 89998776 985 8998 888899999999998533 56889865 7786
No 20
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.35 E-value=1.1e-12 Score=86.51 Aligned_cols=60 Identities=30% Similarity=0.789 Sum_probs=51.0
Q ss_pred EecCCCCeEeecCCCcEeCCCCCcee--ecCcCCCCCCCCCC-CeEecCC--CCeEEeCCCCCccCCCCCCCC-cCCC
Q psy11800 135 CINMDGSFKCQCKPGFVLSPTGHACI--DVDECYENPLICLN-GRCDNTL--GSYRCACQPGYSPSPDGGFCV-DRDE 206 (220)
Q Consensus 135 C~~~~~~~~C~C~~G~~~~~~g~~C~--~i~~C~~~~~~C~~-~~C~~~~--~~~~C~C~~G~~~~~~g~~C~-~~~~ 206 (220)
|++..+.|+|.|++|| . .|. ++++|..++ |.| ++|++.. ++|.|.|++||. |++|+ +++|
T Consensus 25 C~n~~~~y~C~C~~G~----~--~C~~~~~~~C~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~ide 90 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGR----A--QCHSVPVKSCSEPR--CFNGGTCQQALYFSDFVCQCPEGFA----GKSCEIDTRA 90 (91)
T ss_dssp CSSSSCEEEEECSSSC----C--BCCEECEEECSSCC--SCTTCEEEEESSSSCEEEECCTTCB----SSSCCBCSSC
T ss_pred cccCCCCcEeECCCCC----c--ccccCcCCcccCCC--CCCCCEeecCCCCCCeEeECCCCCc----CCcCCcCCCC
Confidence 4566788999999999 4 774 789999877 987 8999987 899999999998 99997 6665
No 21
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.35 E-value=4.2e-13 Score=87.93 Aligned_cols=84 Identities=39% Similarity=0.886 Sum_probs=64.3
Q ss_pred CCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCC
Q psy11800 50 LNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGM 129 (220)
Q Consensus 50 ~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~ 129 (220)
++|++|..++..|.++.|+++.++|+|.|++||.+..+++.|+++++|. . ..
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~---------------------------~-~~ 52 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS---------------------------E-NM 52 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH---------------------------H-SC
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC---------------------------C-CC
Confidence 3689999887667668999999999999999999876677887775543 2 23
Q ss_pred CCCceEecCCCCeEeec--CCCcEeCCCCCceeec
Q psy11800 130 CANGMCINMDGSFKCQC--KPGFVLSPTGHACIDV 162 (220)
Q Consensus 130 c~~~~C~~~~~~~~C~C--~~G~~~~~~g~~C~~i 162 (220)
|. ++|++..++|+|.| ..||.+...+..|.+|
T Consensus 53 C~-~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 53 CA-QLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVV 86 (87)
T ss_dssp CS-SEECCCSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred CC-CEEEccCCCEEEECCCCcCCcccCCCCcceEC
Confidence 43 58999999999999 5777655555556544
No 22
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.33 E-value=1.9e-12 Score=89.18 Aligned_cols=73 Identities=33% Similarity=0.727 Sum_probs=60.6
Q ss_pred CCCCceEecCCCCeEeecCCCcEeCCCCCceeec---CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800 129 MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDV---DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD 205 (220)
Q Consensus 129 ~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i---~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~ 205 (220)
+.++++|++..++|+|.|++|| .|..|.++ ++|...+..|.+ +|+++.++|.|.|++||.+..+++.|++++
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~----~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~ 96 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGW----EGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV 96 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTE----ESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred CCCcCCCCCCCCCcEeeCCCCC----cCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence 5567899999999999999999 66778654 468765545765 999999999999999999988899998665
Q ss_pred C
Q psy11800 206 E 206 (220)
Q Consensus 206 ~ 206 (220)
+
T Consensus 97 ~ 97 (114)
T 1aut_L 97 K 97 (114)
T ss_dssp S
T ss_pred c
Confidence 4
No 23
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.31 E-value=2.4e-12 Score=92.46 Aligned_cols=86 Identities=31% Similarity=0.778 Sum_probs=63.1
Q ss_pred CCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccC
Q psy11800 47 VSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECS 125 (220)
Q Consensus 47 ~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~ 125 (220)
..|.++|+|..+| | +++.|+++.++|.|.|++||. +..|+++++|...
T Consensus 43 ~~c~dideC~~~p--C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~------------------------- 91 (146)
T 1x7a_L 43 KQYVDGDQCEPNP--CLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIK------------------------- 91 (146)
T ss_dssp -------CCSSCS--SCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSG-------------------------
T ss_pred ccCCCcCcCCCCC--CCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCC-------------------------
Confidence 3588999999877 9 558999999999999999998 6678766444321
Q ss_pred CCCCCCCceE-ecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800 126 QNGMCANGMC-INMDGSFKCQCKPGFVLSPTGHACIDVDEC 165 (220)
Q Consensus 126 ~~~~c~~~~C-~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C 165 (220)
...|.+ +| ++..++|+|.|++||.+..+|..|.++++.
T Consensus 92 -~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 92 -NGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp -GGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred -CCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 123444 78 888999999999999988889999887654
No 24
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.30 E-value=1.3e-12 Score=88.84 Aligned_cols=77 Identities=35% Similarity=0.889 Sum_probs=30.1
Q ss_pred ccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800 121 HDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG 199 (220)
Q Consensus 121 ~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~ 199 (220)
+++|... ..|. ++|++..++|+|.|++||.+. .+..|++||+|.. +..|. +.|+++.++|.|.|++||.+..+++
T Consensus 29 ~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~-~~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~ 104 (107)
T 2w2n_E 29 TNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD-PDTCS-QLCVNLEGGYKCQCEEGFQLDPHTK 104 (107)
T ss_dssp CCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE-TTTEEEC--------------------------------------
T ss_pred CccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc-CCCccccccccCC-CCCcC-CeeecCCCCEEEECCCCceECCCCC
Confidence 4666543 3343 489999999999999999775 5688999999974 23486 6999999999999999999877777
Q ss_pred CC
Q psy11800 200 FC 201 (220)
Q Consensus 200 ~C 201 (220)
.|
T Consensus 105 ~C 106 (107)
T 2w2n_E 105 AC 106 (107)
T ss_dssp --
T ss_pred cc
Confidence 66
No 25
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.25 E-value=1.2e-12 Score=92.81 Aligned_cols=81 Identities=26% Similarity=0.613 Sum_probs=37.0
Q ss_pred ccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-c-CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCC
Q psy11800 121 HDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-V-DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDG 198 (220)
Q Consensus 121 ~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g 198 (220)
+++|...++-++++|++..++|+|.|++|| .|..|.+ + ++|...+..|.+ .|+++.++|.|.|++||.+..+|
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~----~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g 116 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNG 116 (134)
T ss_dssp -------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTS
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCc----cCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCC
Confidence 466654443345799999999999999999 6888966 6 889876556876 99999999999999999998899
Q ss_pred CCCCcCCC
Q psy11800 199 GFCVDRDE 206 (220)
Q Consensus 199 ~~C~~~~~ 206 (220)
+.|+++++
T Consensus 117 ~~C~~~~~ 124 (134)
T 2vh0_B 117 KACIPTGP 124 (134)
T ss_dssp SCEEESSS
T ss_pred CccCcCCC
Confidence 99986644
No 26
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.25 E-value=1.2e-12 Score=98.01 Aligned_cols=87 Identities=25% Similarity=0.596 Sum_probs=40.0
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-c-CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-V-DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 197 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i-~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~ 197 (220)
++++|..+++.++++|++..++|+|.|++|| .|..|.+ + ++|...+..|.+ .|++..++|.|.|++||.+..+
T Consensus 41 dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf----~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~d 115 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGF----EGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADN 115 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTT
T ss_pred CCcccCCCCCCCCCEeECCCCCeeEeCCCCc----eeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCC
Confidence 3467764443345799999999999999999 6889965 6 889876656876 9999999999999999999999
Q ss_pred CCCCCcCC--CCCCCC
Q psy11800 198 GGFCVDRD--ECRTPG 211 (220)
Q Consensus 198 g~~C~~~~--~C~~~~ 211 (220)
|+.|++++ +|....
T Consensus 116 G~~C~~~~~~PC~~~~ 131 (195)
T 1nfu_B 116 GKACIPTGPYPCGKQT 131 (195)
T ss_dssp SSCEEESSSSCTTCCC
T ss_pred CCccccCCCCCCCCCC
Confidence 99998654 465543
No 27
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=87.79 Aligned_cols=100 Identities=24% Similarity=0.601 Sum_probs=66.2
Q ss_pred CcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeee-------eCCCceEeeCCCCCccCCCCCCc
Q psy11800 20 PAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCD-------NTLGSYRCACQPGYSPSPDGGFC 91 (220)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~-------~~~g~~~C~C~~g~~~~~~~~~C 91 (220)
.|.|.++|+|..|........ ....|.++++|..++ | +++.|+ ++.++|.|.|++||. +..|
T Consensus 24 ~C~C~~G~~G~~C~~~~~~~~----~~~~c~~~~~C~~~~--C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C 93 (143)
T 4d90_A 24 SCECPDGFTDPNCSSVVEVAS----DEEEPTSAGPCTPNP--CHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHC 93 (143)
T ss_dssp EEECCTTCCTTTTCSCCCCTT----TTTSCCCCCTTSSCC--CCTTCEEEECCCEETTEECCEEEECCTTEE----STTS
T ss_pred EeECCCCCCCCCCccCccccc----cccccccCCcCCCCC--CCCCCEecCCCccccCCCCCeEeECcCCCc----CCCc
Confidence 355555555544443221111 123344678888776 8 568999 666789999999997 5566
Q ss_pred c-CCCcccCCCCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 92 V-DRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 92 ~-~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
+ ++ ++|....+-.+++|++..++|+|.|++|| .|..|.
T Consensus 94 ~~~i---------------------------~~C~~~~C~~~~~C~~~~g~~~C~C~~G~----~G~~c~ 132 (143)
T 4d90_A 94 QHNI---------------------------NECEVEPCKNGGICTDLVANYSCECPGEF----MGRNCQ 132 (143)
T ss_dssp CEEC---------------------------CTTTTCCSCTTCEEEEETTEEEEECCTTC----BSTTSC
T ss_pred ccCC---------------------------CcCCCCCCCCCCEeECCCCCeEeECCCCC----ccCCce
Confidence 5 44 55544443345799999999999999999 666663
No 28
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.23 E-value=1.1e-11 Score=88.75 Aligned_cols=87 Identities=29% Similarity=0.568 Sum_probs=66.9
Q ss_pred ccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceee-cCcCCCC---CCCCCCCeEecCCC-CeEEeCCCCCc
Q psy11800 119 LYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACID-VDECYEN---PLICLNGRCDNTLG-SYRCACQPGYS 193 (220)
Q Consensus 119 ~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~-i~~C~~~---~~~C~~~~C~~~~~-~~~C~C~~G~~ 193 (220)
.++++|..+++-++++|++..++|+|.|++|| .|..|.+ +++|..- .+.|.+ .|+++.+ +|.|.|++||.
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~----~G~~C~~~~~~c~~c~~~~~~C~~-~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAF----EGRNCETHKDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTE----ESTTSCEEGGGCCSTTTGGGGCSS-EEECCTTSCCEEECCTTEE
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCc----cCCccccCccccccccCCCCCccC-EeECCCCCCEEEECCCCce
Confidence 35678865544445899999999999999999 6888965 6775322 222433 8999999 99999999999
Q ss_pred cCCCCCCCCcCCC--CCCC
Q psy11800 194 PSPDGGFCVDRDE--CRTP 210 (220)
Q Consensus 194 ~~~~g~~C~~~~~--C~~~ 210 (220)
+..+|+.|+++++ |...
T Consensus 120 l~~dG~~C~~~~e~pCg~~ 138 (142)
T 2c4f_L 120 LLADGVSCTPTVEYPCGKI 138 (142)
T ss_dssp ECTTSSCEEESSSSCTTCC
T ss_pred ECCCCCCCCCCCccCCCCC
Confidence 9999999988777 5443
No 29
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.22 E-value=1.1e-10 Score=104.02 Aligned_cols=154 Identities=27% Similarity=0.577 Sum_probs=101.1
Q ss_pred cCCCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEee----CCCCCccCCCCCCccCCCcccCC-------------C--
Q psy11800 41 DSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCA----CQPGYSPSPDGGFCVDRDECRTP-------------G-- 101 (220)
Q Consensus 41 ~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~----C~~g~~~~~~~~~C~~~~~C~~~-------------~-- 101 (220)
...+++..|. ..+|....+.|.++.|++ .++.|. |..|.. +..|.....|... .
T Consensus 202 ~dgsDE~~C~-~~~C~~~~f~C~~g~Ci~--~~~~Cdg~~dC~dgsd----e~~C~~~~~C~~~~~~~C~~g~Ci~~~~~ 274 (699)
T 1n7d_A 202 KDKSDEENCA-VATCRPDEFQCSDGNCIH--GSRQCDREYDCKDMSD----EVGCVNVTLCEGPNKFKCHSGECITLDKV 274 (699)
T ss_dssp TTSCSSCSCC-CCCCCSSEEESSSSCEEE--TTCCSSSCCCSSSSCS----SSSTTCCCCCCSTTCCCCTTSCCCCSSCC
T ss_pred CCCcccccCC-CcccCCCcEecCCCceee--eecccCCCCCCCCCCc----cCCCCCCCcccCCCceecCCCcEeCCccc
Confidence 3444566664 346766555687788886 456775 554432 4445443334211 0
Q ss_pred CCCccccccccccccccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecC
Q psy11800 102 DHDECSQKKKKKKKKKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNT 180 (220)
Q Consensus 102 ~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~ 180 (220)
-.+.+.|..++.......++++|... ..|. +.|++.+++|+|.|++||.+ ..+..|.+|++|... ..|.+ .|+|+
T Consensus 275 Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~-~~C~~-~C~n~ 350 (699)
T 1n7d_A 275 CNMARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDP-DTCSQ-LCVNL 350 (699)
T ss_dssp SCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSS-SSCTT-TCCBC
T ss_pred ccccceecCcccccccccccccccccccCcC-CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCC-Ccccc-ccccC
Confidence 01223344444333333356777643 3343 47999999999999999977 468899999999743 34864 89999
Q ss_pred CCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800 181 LGSYRCACQPGYSPSPDGGFCVDRD 205 (220)
Q Consensus 181 ~~~~~C~C~~G~~~~~~g~~C~~~~ 205 (220)
.++|.|.|++||.+..+++.|+.+.
T Consensus 351 ~g~y~C~C~~G~~~~~~~~~C~~~~ 375 (699)
T 1n7d_A 351 EGGYKCQCEEGFQLDPHTKACKAVG 375 (699)
T ss_dssp SSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred CCCeeeeeecccccCCCCCcccccc
Confidence 9999999999999988888897653
No 30
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=100.14 Aligned_cols=147 Identities=23% Similarity=0.519 Sum_probs=57.9
Q ss_pred CCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCC-----CCccCCCccc
Q psy11800 25 STYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDG-----GFCVDRDECR 98 (220)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~-----~~C~~~~~C~ 98 (220)
+...++.|...+.+.|..+|.|..|+. +.|.. + | +++.|++ .+.|.|++||.+.... ..|.+...|.
T Consensus 154 ~C~~~G~C~~~~~C~C~~G~~G~~C~~-~~C~~-~--C~~~G~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~ 226 (324)
T 2ygq_A 154 GCRNGGFCNERRICECPDGFHGPHCEK-ALCTP-R--CMNGGLCVT---PGFCICPPGFYGVNCDKANCSTTCFNGGTCF 226 (324)
T ss_dssp CCCSSCEECTTSCEECCTTEESSSSCE-ESSSS-C--CCTTCEECS---SCCEECCTTCBTTTTCBCCCSSCCCSSCCBS
T ss_pred CCCCCCEECCCCeEECCCCCcCCCCCC-CCCCC-C--CCCCCEEcC---CCEEeCCCCccCCCcccCcCCCCCCCCCeeC
Confidence 344445555568888999999999975 56763 3 8 6699975 4789999999954321 1222223333
Q ss_pred CCCCCCccccccccccccccccccccCCCCCC-CCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-Ce
Q psy11800 99 TPGDHDECSQKKKKKKKKKKLYHDECSQNGMC-ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GR 176 (220)
Q Consensus 99 ~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c-~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~ 176 (220)
. .+.|.|.+||+|..|+. +.|. ..| ++++|+. .++|.|.+|| .|..|. ++.|. . .|.+ ++
T Consensus 227 ~---~~~C~C~~G~~G~~C~~--~~C~--~~C~~~g~C~~---~~~C~C~~G~----~G~~C~-~~~C~-~--~C~~~g~ 288 (324)
T 2ygq_A 227 Y---PGKCICPPGLEGEQCEI--SKCP--QPCRNGGKCIG---KSKCKCSKGY----QGDLCS-KPVCE-P--GCGAHGT 288 (324)
T ss_dssp C---SSCBCCCTTCCTTTTC------------------------------------------------------------
T ss_pred C---CCeeeCCCCccCCCCCc--CcCC--CcCCCCCEECC---CCEEECCCCC----cCCCCc-CCCCC-C--CCCCCCE
Confidence 2 47899999999999874 4563 334 3478874 4699999999 677885 45675 2 3864 88
Q ss_pred EecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 177 CDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 177 C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
|++ .+.|.|.+||. |..|+.
T Consensus 289 C~~---~~~C~C~~G~~----G~~C~~ 308 (324)
T 2ygq_A 289 CHE---PNKCQCQEGWH----GRHCNK 308 (324)
T ss_dssp ---------------------------
T ss_pred ECC---CCEeECCCCCc----CCCCCC
Confidence 986 47899999999 888864
No 31
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.19 E-value=5e-12 Score=85.89 Aligned_cols=86 Identities=34% Similarity=0.799 Sum_probs=36.9
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccccccccccccc
Q psy11800 43 LSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHD 122 (220)
Q Consensus 43 ~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~ 122 (220)
+|.+..| ++++|..++..|. ..|+++.++|.|.|++||.+. ++..|+++++|.
T Consensus 21 ~~~~~~C-d~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~------------------------ 73 (107)
T 2w2n_E 21 LYFQGAM-GTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQ------------------------ 73 (107)
T ss_dssp CCCSCCB-SCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEE-TTTEEEC-----------------------------
T ss_pred CcCCCCC-cCccCcCCCCCCC-CEeEeCCCCeEEECCCCcccc-CCCccccccccC------------------------
Confidence 4446677 6799986555574 599999999999999999963 356777765443
Q ss_pred ccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800 123 ECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159 (220)
Q Consensus 123 ~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C 159 (220)
....|. ++|++..++|+|.|++||.+...++.|
T Consensus 74 ---~~~~C~-~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 74 ---DPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp -------------------------------------
T ss_pred ---CCCCcC-CeeecCCCCEEEECCCCceECCCCCcc
Confidence 223343 589999999999999999876655554
No 32
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.19 E-value=4.4e-11 Score=85.52 Aligned_cols=85 Identities=33% Similarity=0.813 Sum_probs=64.5
Q ss_pred CCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCCCCCCccccccccccccccccccccC-
Q psy11800 49 DLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTPGDHDECSQKKKKKKKKKKLYHDECS- 125 (220)
Q Consensus 49 C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~- 125 (220)
|.++++|..+| | ++++|+++.++|.|.|++||. +..|+. +++|.. |.
T Consensus 44 c~did~C~~~p--C~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~------------------------c~~ 93 (142)
T 2c4f_L 44 YSDGDQCASSP--CQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLI------------------------CVN 93 (142)
T ss_dssp HTTCCGGGGCC--CCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCS------------------------TTT
T ss_pred CCccCcCcCCC--cCCCCEEeCCCCCEEeeCCCCcc----CCccccCcccccc------------------------ccC
Confidence 57899999877 9 558999999999999999998 566764 222211 11
Q ss_pred CCCCCCCceEecCCC-CeEeecCCCcEeCCCCCceeecCc
Q psy11800 126 QNGMCANGMCINMDG-SFKCQCKPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 126 ~~~~c~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~i~~ 164 (220)
.+..|.+ +|++..+ +|+|.|++||.+..++..|.++++
T Consensus 94 ~~~~C~~-~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 94 ENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp GGGGCSS-EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCccC-EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 1122322 8999998 999999999998888999987765
No 33
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.19 E-value=4.6e-11 Score=107.40 Aligned_cols=99 Identities=28% Similarity=0.665 Sum_probs=74.4
Q ss_pred ccccccccccccccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCC
Q psy11800 105 ECSQKKKKKKKKKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGS 183 (220)
Q Consensus 105 ~C~c~~~~~~~~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~ 183 (220)
.+.|..++......-.+++|... ..|. ..|++.+++|+|.|++||.+ ..+..|.+|++|. .+..|.+ .|+|+.++
T Consensus 296 ~~dC~dgsDe~~~~C~~~~C~~~~~~C~-~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C~~-~C~n~~gs 371 (791)
T 3m0c_C 296 ARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTCSQ-LCVNLEGG 371 (791)
T ss_dssp SCCSSSSCSCCCTTBSCCSTTTGGGGCS-SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSCTT-TCCBCSSC
T ss_pred ccccccccCccccccccccccccccCcc-ccccCCCCCcccCCCCCCcc-CCCCccccCcccC-CCCCCCC-eeecCCCC
Confidence 33444444333322234666543 2333 38999999999999999988 4789999999998 3445764 89999999
Q ss_pred eEEeCCCCCccCCCCCCCCcCCCC
Q psy11800 184 YRCACQPGYSPSPDGGFCVDRDEC 207 (220)
Q Consensus 184 ~~C~C~~G~~~~~~g~~C~~~~~C 207 (220)
|.|.|++||.+.++++.|+.++++
T Consensus 372 y~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 372 YKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp BCCCCCSSEECCSSCCCCEETTSC
T ss_pred ceeecCCCCEeCCCCceeeecccc
Confidence 999999999998899999887765
No 34
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.18 E-value=8.9e-13 Score=96.53 Aligned_cols=122 Identities=25% Similarity=0.458 Sum_probs=87.0
Q ss_pred CCCCccccccCCCC----CCCCCCCCc--cCCCCCCC---CCCeeeeCCC----ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800 32 ETQTYTGLSDSLSL----GVSDLNVDE--CYENPLIC---LNGRCDNTLG----SYRCACQPGYSPSPDGGFCVDRDECR 98 (220)
Q Consensus 32 ~~~~~~~~~~~~~~----g~~C~~i~~--C~~~~~~C---~~~~C~~~~g----~~~C~C~~g~~~~~~~~~C~~~~~C~ 98 (220)
....|.+.+..+|. |..|+++++ |...+..| .++.|++..+ +|.|.|++||.. +..|+ .|.
T Consensus 20 ~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~---~~~C~---~C~ 93 (162)
T 1uzk_A 20 TPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAW---GTPCE---MCP 93 (162)
T ss_dssp ETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEE---TTTTE---ECC
T ss_pred CCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCc---CCCcc---cCC
Confidence 33457788888886 889988887 87644334 3578998876 799999999985 34454 233
Q ss_pred C-CCCCCcccccc--ccccc---cccccccccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800 99 T-PGDHDECSQKK--KKKKK---KKKLYHDECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHAC 159 (220)
Q Consensus 99 ~-~~~~~~C~c~~--~~~~~---~~~~~~~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C 159 (220)
. ....+.|.|.. ||.+. .+++++|+|... ..|.+++|+++.++|+|.|++||.+..+++.|
T Consensus 94 ~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C 161 (162)
T 1uzk_A 94 AVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 161 (162)
T ss_dssp CTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred CCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence 2 22457888877 88875 466789999754 45667899999999999999999887777665
No 35
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.17 E-value=7.7e-15 Score=114.17 Aligned_cols=149 Identities=12% Similarity=0.061 Sum_probs=88.1
Q ss_pred CCCC-CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCC--CCCCccccccc-cccccccc
Q psy11800 46 GVSD-LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTP--GDHDECSQKKK-KKKKKKKL 119 (220)
Q Consensus 46 g~~C-~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~--~~~~~C~c~~~-~~~~~~~~ 119 (220)
|.++ +++.++.. + | ++++|++..++|.|.|++||++ ..|+. +++|... .....|..... +.|.++..
T Consensus 26 g~~~~~n~~~~~~-~--c~ngG~C~~g~~~y~C~Cp~Gf~G----~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~ 98 (267)
T 4fbr_A 26 GARDKQNVVALDI-K--SDDGGKTLKGTMTYNGEGPIGFRG----TLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQ 98 (267)
T ss_dssp CCCSSCCEEEEEE-E--CSSTTSEEEEEEEETTSCCEEEEE----EECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSC
T ss_pred ccccccccccCCC-C--cCCCCeecCCCCCeEEeCCCCccc----ccccccccccccccCcCCCcccCCCeeeccCcccc
Confidence 5555 44555554 2 5 6799999999999999999984 44432 2332211 11112222111 23444443
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCC--------------------------CCCceeecCcCCCCCCCCC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSP--------------------------TGHACIDVDECYENPLICL 173 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~--------------------------~g~~C~~i~~C~~~~~~C~ 173 (220)
. ++|...++.++++|++...+|+|+|+.||++.. .+.+|.....|...+ |.
T Consensus 99 ~-~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~--c~ 175 (267)
T 4fbr_A 99 N-IVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAK--SN 175 (267)
T ss_dssp C-EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEE--CS
T ss_pred c-cccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCC--CC
Confidence 3 466555555557777777777888888874321 111121111122222 66
Q ss_pred C-CeEecCCCCeEEeCCCCCccCCCCCCCC-cCCCCC
Q psy11800 174 N-GRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECR 208 (220)
Q Consensus 174 ~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~ 208 (220)
+ ++|++...+|.|.|++||+ |..|+ ++++|.
T Consensus 176 ngg~C~dg~~~y~C~Cp~Gf~----G~~c~~~i~ec~ 208 (267)
T 4fbr_A 176 DGGKTLSGTMTYNGEGPIGFR----GTLTSPDTYTVE 208 (267)
T ss_dssp STTSEEEEEEEETTSCCEEEE----EEEEETTEEEEE
T ss_pred CCCEeeCCCCCeEEeCCCCcc----ccccccccceec
Confidence 5 7899988999999999999 88886 566643
No 36
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.15 E-value=7.1e-11 Score=81.23 Aligned_cols=86 Identities=30% Similarity=0.782 Sum_probs=60.6
Q ss_pred CCCCCccCCCC------CCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccc
Q psy11800 49 DLNVDECYENP------LIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYH 121 (220)
Q Consensus 49 C~~i~~C~~~~------~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~ 121 (220)
+.|+|+|..+| +.| ++++|+++.++|+|.|++||+ +..|+++.+ +
T Consensus 3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~------------------------~ 54 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE----GRFCQREVS------------------------F 54 (114)
T ss_dssp -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE----STTSCEECC------------------------S
T ss_pred ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCCc------------------------C
Confidence 45677888766 446 668999999999999999998 445654311 1
Q ss_pred cccCCC-CCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800 122 DECSQN-GMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD 163 (220)
Q Consensus 122 ~~C~~~-~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~ 163 (220)
++|... ..|.+ +|++..++|+|.|++||.+...++.|.++.
T Consensus 55 ~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~ 96 (114)
T 1aut_L 55 LNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV 96 (114)
T ss_dssp SSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred CcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence 344432 23433 899999999999999999988899997654
No 37
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.15 E-value=1.9e-11 Score=86.58 Aligned_cols=85 Identities=33% Similarity=0.812 Sum_probs=31.2
Q ss_pred CCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C-CcccCCCCCCccccccccccccccccccc
Q psy11800 47 VSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R-DECRTPGDHDECSQKKKKKKKKKKLYHDE 123 (220)
Q Consensus 47 ~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~-~~C~~~~~~~~C~c~~~~~~~~~~~~~~~ 123 (220)
..|.++++|..+| | ++++|+++.++|.|.|++||. +..|.. + ++|...
T Consensus 37 ~~c~d~d~C~~~p--C~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~----------------------- 87 (134)
T 2vh0_B 37 NKYKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD----------------------- 87 (134)
T ss_dssp --------------------------------------------------CCGGGTG-----------------------
T ss_pred ccCCCcCcCCCCC--CCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccC-----------------------
Confidence 3588999999877 9 558999999999999999998 566765 3 334321
Q ss_pred cCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800 124 CSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 124 C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~ 164 (220)
...|.+ +|++..++|+|.|++||.+..++..|.++++
T Consensus 88 ---~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 88 ---NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp ---GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ---CCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence 123444 8999999999999999998878999977643
No 38
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.14 E-value=5.8e-11 Score=96.00 Aligned_cols=86 Identities=29% Similarity=0.643 Sum_probs=71.1
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCcee-ecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACI-DVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPD 197 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~ 197 (220)
++++|..+++-++++|++..++|+|.|++|| .|..|. ++++|... ...|.+ .|+++.++|.|.|++||.+..+
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~----~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~ 78 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGY----EGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGED 78 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSC----CSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTT
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCC----cCCccccCcccCCCCCCCCCcC-ccccCCCeeEEecccccccccc
Confidence 3467766554455899999999999999999 788996 99999872 245987 9999999999999999998888
Q ss_pred CCCCCcCCCCCCC
Q psy11800 198 GGFCVDRDECRTP 210 (220)
Q Consensus 198 g~~C~~~~~C~~~ 210 (220)
+..|.++++|...
T Consensus 79 ~~~C~~~~~c~cg 91 (317)
T 3h5c_B 79 HKQCVPHDQCACG 91 (317)
T ss_dssp SSCCEECSSCCCC
T ss_pred ccccccccccccc
Confidence 8999999888543
No 39
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.14 E-value=2.1e-11 Score=91.29 Aligned_cols=83 Identities=34% Similarity=0.843 Sum_probs=31.2
Q ss_pred CCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C-CcccCCCCCCcccccccccccccccccccc
Q psy11800 48 SDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R-DECRTPGDHDECSQKKKKKKKKKKLYHDEC 124 (220)
Q Consensus 48 ~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~-~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C 124 (220)
.|.++++|..+| | +++.|++..++|.|.|++||. +..|.. + ++|...
T Consensus 38 ~c~dideC~~~p--C~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~------------------------ 87 (195)
T 1nfu_B 38 KYKDGDQCETSP--CQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD------------------------ 87 (195)
T ss_dssp -------------------------------------------------CCGGGTG------------------------
T ss_pred cCCCCcccCCCC--CCCCCEeECCCCCeeEeCCCCce----eccccccccccccCC------------------------
Confidence 588999999877 9 558999999999999999998 566765 3 344321
Q ss_pred CCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800 125 SQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD 163 (220)
Q Consensus 125 ~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~ 163 (220)
...|.+ +|++..++|+|.|++||.+..+|..|.+++
T Consensus 88 --~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 88 --NGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp --GGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred --CCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 123444 899999999999999999887899997764
No 40
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.13 E-value=7.6e-14 Score=108.58 Aligned_cols=138 Identities=12% Similarity=0.051 Sum_probs=85.1
Q ss_pred CCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-CCcccCCC--CCCccc-cccccccccccc
Q psy11800 45 LGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-RDECRTPG--DHDECS-QKKKKKKKKKKL 119 (220)
Q Consensus 45 ~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~~~C~~~~--~~~~C~-c~~~~~~~~~~~ 119 (220)
.|..|+++++|.+.| | +.++|++...+|+|.|+.||++ ..|+. +++|.... ....|. +...+.|.++.+
T Consensus 92 ~G~~c~~~~eC~s~p--C~ngG~C~~~~~sy~C~C~~Gf~G----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~ 165 (267)
T 4fbr_A 92 LGARDKQNIVAVSIK--SNDGGKTLTGTTTYNGEGPIGFKS----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQ 165 (267)
T ss_dssp CCCCSSCCEEEEEEE--CSSTTSEEEEEEEETTSCCEEEEE----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTS
T ss_pred ccCccccccccCCCC--CCCCCEEecCCccEEeeCCCCccc----cCCCCCcccccccCCcCCccccCCcceeccccccc
Confidence 477787777888877 8 5699999999999999999984 44543 23332221 111222 122344666666
Q ss_pred cccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCce-eecCcCC------CCC---------------------CC
Q psy11800 120 YHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHAC-IDVDECY------ENP---------------------LI 171 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~------~~~---------------------~~ 171 (220)
.++.+ ..++.++++|++...+|+|+|++|| .+..| .++++|. ..+ ..
T Consensus 166 ~i~c~-~~~c~ngg~C~dg~~~y~C~Cp~Gf----~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~ 240 (267)
T 4fbr_A 166 NVINV-DAKSNDGGKTLSGTMTYNGEGPIGF----RGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVA 240 (267)
T ss_dssp CEEEE-EEECSSTTSEEEEEEEETTSCCEEE----EEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEE
T ss_pred ccccC-CCCCCCCCEeeCCCCCeEEeCCCCc----cccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcC
Confidence 55432 3445566788888888899999998 44566 3334321 111 02
Q ss_pred CCC-CeEecCCCCeEEeCCCCCc
Q psy11800 172 CLN-GRCDNTLGSYRCACQPGYS 193 (220)
Q Consensus 172 C~~-~~C~~~~~~~~C~C~~G~~ 193 (220)
|.+ ++|++...+|.|.|+.||+
T Consensus 241 c~ngGtC~dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 241 SSDGGKTLAGTMIYNGEGPIGFR 263 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEE
T ss_pred CCCCCEeeCCCcceeecCCCCcc
Confidence 343 5666666667777777775
No 41
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.10 E-value=1.8e-10 Score=96.02 Aligned_cols=71 Identities=31% Similarity=0.802 Sum_probs=62.0
Q ss_pred CceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCC
Q psy11800 132 NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRD 205 (220)
Q Consensus 132 ~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~ 205 (220)
.+.|++.+++|.|.|++||.+ ..+..|.++|||.. +..|.+ .|+|+.++|.|.|.+||.+..+++.|+.++
T Consensus 11 ~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~-~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 11 SHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp SSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST-TSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred CCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc-cCCCCC-ccCCCccceeeeccccccccccccceeecc
Confidence 358999999999999999988 46889999999984 345876 899999999999999999988888897654
No 42
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.09 E-value=2.3e-10 Score=100.68 Aligned_cols=128 Identities=32% Similarity=0.725 Sum_probs=91.1
Q ss_pred ccCCCCCCC-CCCeeeeCCCceE---eeCCCCCccCCCCCCccCC---------CcccCC---------C--CCCccccc
Q psy11800 54 ECYENPLIC-LNGRCDNTLGSYR---CACQPGYSPSPDGGFCVDR---------DECRTP---------G--DHDECSQK 109 (220)
Q Consensus 54 ~C~~~~~~C-~~~~C~~~~g~~~---C~C~~g~~~~~~~~~C~~~---------~~C~~~---------~--~~~~C~c~ 109 (220)
+|..+| | +.+.|.+..|.|. |.|.+||.+. .|+.. ++|... + ..+.|.|.
T Consensus 436 ~C~~~p--c~n~~~C~~g~G~~~~G~C~C~~Gy~G~----~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~ 509 (690)
T 3fcs_B 436 ACQAQA--EPNSHRCNNGNGTFECGVCRCGPGWLGS----QCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCH 509 (690)
T ss_dssp GGGTTC--CTTCTTTTTTSEEEETTEEEECTTCCSS----SSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEEC
T ss_pred CCcCCC--CCCCCcccCCCCeEeCCceEeCCCccCC----ceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEee
Confidence 566666 7 4478887777887 9999999853 34211 234321 1 23678898
Q ss_pred ----cccccccccccccccCCC--CCCC-CceEecCCCCeEeecCCCcEeCCCCCcee---ecCcCCCCC-CCCCC-CeE
Q psy11800 110 ----KKKKKKKKKLYHDECSQN--GMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI---DVDECYENP-LICLN-GRC 177 (220)
Q Consensus 110 ----~~~~~~~~~~~~~~C~~~--~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~i~~C~~~~-~~C~~-~~C 177 (220)
.+|+|..|+.+++.|... ..|. +|+|.+ ++|.|.+|| .|..|. ++++|.... ..|.+ |.|
T Consensus 510 ~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy----~G~~CeC~~~~~~C~~~~g~~C~~~G~C 581 (690)
T 3fcs_B 510 SSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDW----TGYYCNCTTRTDTCMSSNGLLCSGRGKC 581 (690)
T ss_dssp CCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTE----ESSSSCEECCCTTTBCTTSSBTSSSCEE
T ss_pred cCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCC----cCCCCccCCCCCcccCCCCCCCCCCCEE
Confidence 999999998888888743 3454 578976 589999999 667774 577887532 35875 899
Q ss_pred ecCCCCeEEeC-CCCCccCCCCCCCCc
Q psy11800 178 DNTLGSYRCAC-QPGYSPSPDGGFCVD 203 (220)
Q Consensus 178 ~~~~~~~~C~C-~~G~~~~~~g~~C~~ 203 (220)
++. .|.| .+||. |..|+.
T Consensus 582 ~~g----~C~C~~~Gy~----G~~Ce~ 600 (690)
T 3fcs_B 582 ECG----SCVCIQPGSY----GDTCEK 600 (690)
T ss_dssp ETT----EEECCSTTCB----STTSCB
T ss_pred eCC----EEECCCCCcc----CCCcCc
Confidence 762 7999 99998 888875
No 43
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.05 E-value=3.2e-11 Score=100.16 Aligned_cols=83 Identities=34% Similarity=0.843 Sum_probs=25.7
Q ss_pred ccccCCCC-CCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCC
Q psy11800 121 HDECSQNG-MCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGG 199 (220)
Q Consensus 121 ~~~C~~~~-~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~ 199 (220)
+|+|...+ .|.+ .|.+..++|+|.|++||++.+++..|.++++|.. ...|.+ .|+++.++|.|.|++||.+.++++
T Consensus 3 ~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~-~~~C~~-~C~~~~g~~~C~C~~g~~l~~d~~ 79 (386)
T 3v65_B 3 EENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE-EGYCSQ-GCTNSEGAFQCWCEAGYELRPDRR 79 (386)
T ss_dssp ---------------------------------------------------CCTT-EEC-----CCEECCTTEEECTTSS
T ss_pred cCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCC-cCcccC-cCCCCCCCCeEEECCCceEcCCCC
Confidence 46775443 3444 7888888999999999988778999999999973 335876 599999999999999999988999
Q ss_pred CCCcCCC
Q psy11800 200 FCVDRDE 206 (220)
Q Consensus 200 ~C~~~~~ 206 (220)
.|+.+++
T Consensus 80 ~C~~~~~ 86 (386)
T 3v65_B 80 SCKALGP 86 (386)
T ss_dssp CEEECSS
T ss_pred eECCccc
Confidence 9976544
No 44
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.01 E-value=6.6e-10 Score=89.77 Aligned_cols=83 Identities=31% Similarity=0.912 Sum_probs=65.9
Q ss_pred CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCcc-CCCcccCCCCCCccccccccccccccccccccCC-
Q psy11800 50 LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQ- 126 (220)
Q Consensus 50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~-~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~- 126 (220)
.++++|..+| | +++.|++..++|.|.|++||. +..|+ +++ +|..
T Consensus 3 ~d~~~C~~~p--C~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~---------------------------eC~~~ 49 (317)
T 3h5c_B 3 KGGSPCISQP--CLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKN---------------------------ECHPE 49 (317)
T ss_dssp ---CCTTSCC--CTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSS---------------------------SCCTT
T ss_pred ccCCcCCCCC--CCCCCEeECCCCCeEEECCCCCc----CCccccCcc---------------------------cCCCC
Confidence 3678999888 9 568999999999999999998 56776 554 4443
Q ss_pred -CCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCC
Q psy11800 127 -NGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECY 166 (220)
Q Consensus 127 -~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~ 166 (220)
...|.+ .|++..++|+|.|++||.+...+..|.++++|.
T Consensus 50 ~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 50 RTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 89 (317)
T ss_dssp CTTSCSS-EEECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred CCCCCcC-ccccCCCeeEEeccccccccccccccccccccc
Confidence 245655 899999999999999999887888998888874
No 45
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.00 E-value=1.2e-10 Score=96.62 Aligned_cols=85 Identities=32% Similarity=0.839 Sum_probs=23.9
Q ss_pred CCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800 51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC 130 (220)
Q Consensus 51 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c 130 (220)
++|+|..++..|.+ .|.+..++|.|.|++||.+..+++.|.++++|. ....|
T Consensus 2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~---------------------------~~~~C 53 (386)
T 3v65_B 2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA---------------------------EEGYC 53 (386)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeC---------------------------CcCcc
Confidence 68899988766754 898889999999999999877788898775553 23345
Q ss_pred CCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800 131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~ 164 (220)
.+ .|++..++|+|.|.+||.+.++++.|..+++
T Consensus 54 ~~-~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~ 86 (386)
T 3v65_B 54 SQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP 86 (386)
T ss_dssp TT-EEC-----CCEECCTTEEECTTSSCEEECSS
T ss_pred cC-cCCCCCCCCeEEECCCceEcCCCCeECCccc
Confidence 44 4999999999999999999888899976543
No 46
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.98 E-value=4.3e-10 Score=74.04 Aligned_cols=81 Identities=21% Similarity=0.459 Sum_probs=58.6
Q ss_pred ceEeeCCCCCccCCCCCCccCCCcc-----cCCCCCCcccccccccccccc-ccccccCCCCCCCCceEecCC--CCeEe
Q psy11800 73 SYRCACQPGYSPSPDGGFCVDRDEC-----RTPGDHDECSQKKKKKKKKKK-LYHDECSQNGMCANGMCINMD--GSFKC 144 (220)
Q Consensus 73 ~~~C~C~~g~~~~~~~~~C~~~~~C-----~~~~~~~~C~c~~~~~~~~~~-~~~~~C~~~~~c~~~~C~~~~--~~~~C 144 (220)
+|.|.|.+||.+ ..|. +++| ......+.|.|.++|. .|+ .++++|...++-++++|++.. ++|+|
T Consensus 1 sy~C~C~~g~~g----~~c~-~~~c~~~pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C 73 (91)
T 1tpg_A 1 SYQVICRDEKTQ----MIYQ-QHQSWLRPVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVC 73 (91)
T ss_dssp CCCCCCBCSSSC----CBCC-SSCEEEEECSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEE
T ss_pred CeeeECCCCCcC----CeEC-CCcccCCccccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEe
Confidence 478888888873 4453 4443 3344567888888887 666 577899765544558999887 88999
Q ss_pred ecCCCcEeCCCCCcee-ecCc
Q psy11800 145 QCKPGFVLSPTGHACI-DVDE 164 (220)
Q Consensus 145 ~C~~G~~~~~~g~~C~-~i~~ 164 (220)
.|++|| .|..|. +|++
T Consensus 74 ~C~~G~----~G~~Ce~~ide 90 (91)
T 1tpg_A 74 QCPEGF----AGKSCEIDTRA 90 (91)
T ss_dssp ECCTTC----BSSSCCBCSSC
T ss_pred ECCCCC----cCCcCCcCCCC
Confidence 999999 788883 5654
No 47
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.93 E-value=2.7e-10 Score=78.77 Aligned_cols=81 Identities=32% Similarity=0.730 Sum_probs=57.8
Q ss_pred cccccCCCCCCCCceEecC-CCCeEeecCCCcEeCCC-CCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCC
Q psy11800 120 YHDECSQNGMCANGMCINM-DGSFKCQCKPGFVLSPT-GHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPD 197 (220)
Q Consensus 120 ~~~~C~~~~~c~~~~C~~~-~~~~~C~C~~G~~~~~~-g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~ 197 (220)
++|+|.. ..|.+ +|++. .++|+|.|++||.+... ...|.+ +|...+ |. +.|++ .++|.|.|++||.+..
T Consensus 3 dideC~~-~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~--~C~~~~--C~-~~C~~-~~~y~C~C~~Gy~~~~- 73 (118)
T 1dx5_I 3 PVDPCFR-ANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM--FCNQTA--CP-ADCDP-NTQASCECPEGYILDD- 73 (118)
T ss_dssp CCCGGGG-CCCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEE--CCCSSE--EE-CEECT-TSTTCEECCTTEEEET-
T ss_pred ccccCCC-CCCCC-CCCCCCCCCEEeECCCCccccCCCCCcccc--ccCCCC--CC-CcccC-CCCeEeECCCCccCCC-
Confidence 4577743 34544 99999 89999999999977532 112322 243333 54 57888 5889999999998755
Q ss_pred CCCCCcCCCCCC
Q psy11800 198 GGFCVDRDECRT 209 (220)
Q Consensus 198 g~~C~~~~~C~~ 209 (220)
++.|++|+||+.
T Consensus 74 g~~C~dideC~~ 85 (118)
T 1dx5_I 74 GFICTDIDECEN 85 (118)
T ss_dssp TTEEEECCHHHH
T ss_pred CCccccccccCC
Confidence 788999999876
No 48
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.87 E-value=8.8e-09 Score=90.75 Aligned_cols=129 Identities=25% Similarity=0.523 Sum_probs=89.6
Q ss_pred ccccCCCCCCCCC-CC--------CccCCCC--CCC-CCCeeeeCCCceEeeCC----CCCccCCCCCCcc-CCCcccC-
Q psy11800 38 GLSDSLSLGVSDL-NV--------DECYENP--LIC-LNGRCDNTLGSYRCACQ----PGYSPSPDGGFCV-DRDECRT- 99 (220)
Q Consensus 38 ~~~~~~~~g~~C~-~i--------~~C~~~~--~~C-~~~~C~~~~g~~~C~C~----~g~~~~~~~~~C~-~~~~C~~- 99 (220)
|.|..+|.|..|+ .+ ++|...+ ..| .+|.|++ +.|.|. +||. |..|+ +...|..
T Consensus 460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~----G~~Ce~~~~~C~~~ 531 (690)
T 3fcs_B 460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT----GKYCECDDFSCVRY 531 (690)
T ss_dssp EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB----STTSCBCSSCCCBS
T ss_pred eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee----CCCcCcccCcCcCC
Confidence 6778888888884 33 5687533 248 6689974 579999 9998 44554 2333432
Q ss_pred -------CC--CCCcccccccccccccc--ccccccCCC--CCCC-CceEecCCCCeEeec-CCCcEeCCCCCceeecCc
Q psy11800 100 -------PG--DHDECSQKKKKKKKKKK--LYHDECSQN--GMCA-NGMCINMDGSFKCQC-KPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 100 -------~~--~~~~C~c~~~~~~~~~~--~~~~~C~~~--~~c~-~~~C~~~~~~~~C~C-~~G~~~~~~g~~C~~i~~ 164 (220)
.+ ..+.|.|..||+|..|+ ..++.|... ..|. +|+|++. +|.| .+|| .|..|..-..
T Consensus 532 ~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy----~G~~Ce~C~~ 603 (690)
T 3fcs_B 532 KGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPGS----YGDTCEKCPT 603 (690)
T ss_dssp SSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT----EEECCSTTC----BSTTSCBCTT
T ss_pred CCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC----EEECCCCCc----cCCCcCcCCC
Confidence 11 22789999999999998 567788642 3454 5899763 8999 9999 7888854344
Q ss_pred CCCCCCCCCC-CeEecCCCCeEEeCCCCCc
Q psy11800 165 CYENPLICLN-GRCDNTLGSYRCACQPGYS 193 (220)
Q Consensus 165 C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~ 193 (220)
| +..|.+ +.|++ |..+|+
T Consensus 604 C---~~~C~~~g~Cv~--------C~~g~t 622 (690)
T 3fcs_B 604 C---PDACTFKKECVE--------CKKFDR 622 (690)
T ss_dssp S---CCTTTSCCGGGT--------TTTTCC
T ss_pred C---CCCCCCCCCccc--------CCCCCc
Confidence 5 234875 78875 888887
No 49
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.85 E-value=2.6e-10 Score=83.86 Aligned_cols=119 Identities=24% Similarity=0.519 Sum_probs=73.9
Q ss_pred CCceEeeCCCCCccCCCCCCccCCCcccCC---CCCCccccccccccccccccccccCCCCCCCCceEecCCCCeEeecC
Q psy11800 71 LGSYRCACQPGYSPSPDGGFCVDRDECRTP---GDHDECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCK 147 (220)
Q Consensus 71 ~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~---~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~ 147 (220)
...+.|.|++||.+......|.....|... ...+.|.|.++|+|..|+. +.|...-.+.++.|++ .++|.|.
T Consensus 14 ~~~~~c~C~~g~~G~~C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~--~~C~~~C~~~~g~C~~---~~~C~C~ 88 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNR--AICRQGCSPKHGSCKL---PGDCRCQ 88 (169)
T ss_dssp -------CCTTEETTTTCEECCCEEETTEEEEECSSCCEEECTTEESTTSCE--ECCCTTCCTTTEECSS---TTCCEEC
T ss_pred ccCeeeeCCCcCcCCCcccccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCC--CCCCCCCCCCCcccCC---CCeeECC
Confidence 356789999999864433333322111110 1245789999999998875 3464321125677865 4689999
Q ss_pred CCcEeCCCCCceeecCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC-cCCCCCC
Q psy11800 148 PGFVLSPTGHACIDVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV-DRDECRT 209 (220)
Q Consensus 148 ~G~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~~ 209 (220)
+|| .|..|. +|...+ .|.+++|+ ++|.|.|++||. |..|+ ++++|..
T Consensus 89 ~G~----~G~~C~---~C~~~~-~C~~g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~ 136 (169)
T 2vj2_A 89 YGW----QGLYCD---KCIPHP-GCVHGICN---EPWQCLCETNWG----GQLCDKDLNYCGT 136 (169)
T ss_dssp TTE----ESSSSC---EECCCT-TCSSEECS---STTCCEECTTEE----TTTTCEESCHHHH
T ss_pred CCC----CCCCcc---cCCCCC-CCCCCCcC---CCCEEeCCCCCC----CCcccCCCCCCCC
Confidence 999 566773 355443 37777887 578999999999 88997 7877753
No 50
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=2.8e-09 Score=88.80 Aligned_cols=81 Identities=36% Similarity=0.874 Sum_probs=62.5
Q ss_pred CccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCCCC
Q psy11800 53 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCAN 132 (220)
Q Consensus 53 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~~ 132 (220)
|||..++..|. +.|++++++|.|.|++||.+ .+++.|+++++|. ....|.+
T Consensus 1 ~eC~~~~~~c~-~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~---------------------------~~~~C~~ 51 (400)
T 3p5b_L 1 NECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ---------------------------DPDTCSQ 51 (400)
T ss_dssp CCTTTTGGGCS-SEEEECSSSEEEECCTTEEE-CSSSCEEECCCCS---------------------------TTSSCSS
T ss_pred CcccCCCCCCC-CEeECCCCCeEEECCCCCCc-CCCCcccCchhhh---------------------------ccCCCCC
Confidence 57777664453 59999999999999999997 4677888775554 2234444
Q ss_pred ceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800 133 GMCINMDGSFKCQCKPGFVLSPTGHACIDVD 163 (220)
Q Consensus 133 ~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~ 163 (220)
.|++..++|.|.|.+||.+...+..|..++
T Consensus 52 -~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 52 -LCVNLEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp -CCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred -ccCCCccceeeeccccccccccccceeecc
Confidence 789999999999999998887777886543
No 51
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.83 E-value=3.2e-09 Score=85.93 Aligned_cols=119 Identities=28% Similarity=0.700 Sum_probs=57.1
Q ss_pred CC-CCCeeeeCCCceEeeCCCCCccCCCC-----CCccCCCcccCCCCCCccccccccccccccccccccCCCCCC-CCc
Q psy11800 61 IC-LNGRCDNTLGSYRCACQPGYSPSPDG-----GFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC-ANG 133 (220)
Q Consensus 61 ~C-~~~~C~~~~g~~~C~C~~g~~~~~~~-----~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c-~~~ 133 (220)
.| +++.|.+ .+.|.|++||.+.... ..|.+...|. ..+.|.|.+||+|..|+. +.|. ..| .+|
T Consensus 154 ~C~~~G~C~~---~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~---~~~~C~C~~G~~G~~C~~--~~C~--~~C~~~G 223 (324)
T 2ygq_A 154 GCRNGGFCNE---RRICECPDGFHGPHCEKALCTPRCMNGGLCV---TPGFCICPPGFYGVNCDK--ANCS--TTCFNGG 223 (324)
T ss_dssp CCCSSCEECT---TSCEECCTTEESSSSCEESSSSCCCTTCEEC---SSCCEECCTTCBTTTTCB--CCCS--SCCCSSC
T ss_pred CCCCCCEECC---CCeEECCCCCcCCCCCCCCCCCCCCCCCEEc---CCCEEeCCCCccCCCccc--CcCC--CCCCCCC
Confidence 38 5689975 4789999999854211 1222333333 257899999999999875 3463 234 357
Q ss_pred eEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800 134 MCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 208 (220)
Q Consensus 134 ~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~ 208 (220)
+|+.. ++|.|.+|| .|..|. +++|. . .|.+ +.|+. .+.|.|++||. |..|+ +++|.
T Consensus 224 ~C~~~---~~C~C~~G~----~G~~C~-~~~C~-~--~C~~~g~C~~---~~~C~C~~G~~----G~~C~-~~~C~ 280 (324)
T 2ygq_A 224 TCFYP---GKCICPPGL----EGEQCE-ISKCP-Q--PCRNGGKCIG---KSKCKCSKGYQ----GDLCS-KPVCE 280 (324)
T ss_dssp CBSCS---SCBCCCTTC----CTTTTC-------------------------------------------------
T ss_pred eeCCC---CeeeCCCCc----cCCCCC-cCcCC-C--cCCCCCEECC---CCEEECCCCCc----CCCCc-CCCCC
Confidence 88763 589999999 778884 56675 2 3875 78974 57899999998 77786 34443
No 52
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.76 E-value=2.9e-10 Score=81.68 Aligned_cols=91 Identities=36% Similarity=0.648 Sum_probs=60.2
Q ss_pred ccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecC-----------cCCCCCCCCCC-CeEecCCCC---
Q psy11800 119 LYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD-----------ECYENPLICLN-GRCDNTLGS--- 183 (220)
Q Consensus 119 ~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~-----------~C~~~~~~C~~-~~C~~~~~~--- 183 (220)
.++|+|... .|.+++|++..++|+|.|++||.+...+..|.+++ .|......|.. +.|.+..+.
T Consensus 2 ~dideC~~~-pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g 80 (147)
T 2w86_A 2 ADIDECESS-PCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG 80 (147)
T ss_dssp CCCCGGGGC-CSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred CcCccCcCC-CCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence 356888654 46678999999999999999999877777776543 12111001110 123333333
Q ss_pred -------eEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800 184 -------YRCACQPGYSPSPDGGFCVDRDECRTPG 211 (220)
Q Consensus 184 -------~~C~C~~G~~~~~~g~~C~~~~~C~~~~ 211 (220)
|.|.|++||.+ .+|+.|++|+||+..+
T Consensus 81 ~~C~~c~~~C~C~~Gy~~-~~g~~C~dideC~~~~ 114 (147)
T 2w86_A 81 SPCTLCQVDPICGKGYSR-IKGTQCEDIDECEVFP 114 (147)
T ss_dssp TTTEECCCCTTTCTTEEE-EETTEEEECCHHHHST
T ss_pred CCcccCCCcccCCCcccc-CCCCccCccccccCCC
Confidence 77899999964 2378899999997544
No 53
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.69 E-value=8.2e-09 Score=61.13 Aligned_cols=48 Identities=21% Similarity=0.448 Sum_probs=41.0
Q ss_pred CcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800 163 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211 (220)
Q Consensus 163 ~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~ 211 (220)
|+|....+.|.+ .|+|+.++|.|.|++||.|..+++.|+++++|....
T Consensus 2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~cg~ 49 (55)
T 2jkh_L 2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGK 49 (55)
T ss_dssp CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTTC
T ss_pred ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccCCC
Confidence 677765556865 899999999999999999999999999999986543
No 54
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.63 E-value=1.6e-08 Score=62.61 Aligned_cols=50 Identities=28% Similarity=0.458 Sum_probs=43.3
Q ss_pred eecCcCCCCCCCCCCCeEecCCC-CeEEeCCCCCccCCCCCCCCcCCCCCCC
Q psy11800 160 IDVDECYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECRTP 210 (220)
Q Consensus 160 ~~i~~C~~~~~~C~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~~~~C~~~ 210 (220)
.++++|....+.|.+ .|+++.+ +|.|.|++||.|..+++.|.++++|...
T Consensus 3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg 53 (69)
T 1kli_L 3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG 53 (69)
T ss_dssp SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCC
Confidence 478899876666875 8999998 8999999999999999999999998643
No 55
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.59 E-value=6.5e-08 Score=87.03 Aligned_cols=84 Identities=35% Similarity=0.829 Sum_probs=63.6
Q ss_pred CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCCC
Q psy11800 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMCA 131 (220)
Q Consensus 52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c~ 131 (220)
+++|..++..|. ..|+++.++|.|.|++||.+ .+++.|.++++|.. ...|.
T Consensus 312 ~~~C~~~~~~C~-~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~---------------------------~~~C~ 362 (791)
T 3m0c_C 312 TNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------------------PDTCS 362 (791)
T ss_dssp CCSTTTGGGGCS-SEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSS---------------------------SSSCT
T ss_pred cccccccccCcc-ccccCCCCCcccCCCCCCcc-CCCCccccCcccCC---------------------------CCCCC
Confidence 455554433343 38999999999999999987 45788888766542 22333
Q ss_pred CceEecCCCCeEeecCCCcEeCCCCCceeecCcC
Q psy11800 132 NGMCINMDGSFKCQCKPGFVLSPTGHACIDVDEC 165 (220)
Q Consensus 132 ~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C 165 (220)
.+|++..++|+|.|.+||.+.+.++.|.+++++
T Consensus 363 -~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 363 -QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp -TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred -CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence 278999999999999999998888999887765
No 56
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.52 E-value=2.7e-07 Score=77.21 Aligned_cols=115 Identities=23% Similarity=0.535 Sum_probs=73.4
Q ss_pred eEeeCCCCCccCCCCC---CccCCCcccCCCCCCccccccccccccccccc----------cccCCCCCCCC-ceEecCC
Q psy11800 74 YRCACQPGYSPSPDGG---FCVDRDECRTPGDHDECSQKKKKKKKKKKLYH----------DECSQNGMCAN-GMCINMD 139 (220)
Q Consensus 74 ~~C~C~~g~~~~~~~~---~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~----------~~C~~~~~c~~-~~C~~~~ 139 (220)
+.|.|+.||.+..... .|.+...|.. ..+.|.|.++|.|..|+... ++|.....|.+ +.|. .
T Consensus 185 ~~c~C~~g~~G~~C~~~C~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~ 260 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNHLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--P 260 (423)
T ss_dssp EECSSCTTEESTTSCEECCCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--T
T ss_pred cCCcCCCCCCCCCCCCCCCCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--C
Confidence 4577888887543332 3444444543 35788888888888887532 24443444543 6775 4
Q ss_pred CCeEeecCCCcEeCCCCCceee-------cCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800 140 GSFKCQCKPGFVLSPTGHACID-------VDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 140 ~~~~C~C~~G~~~~~~g~~C~~-------i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
+.++|.|.+|| .|..|.. -+.|.. ...|.+ +.|.+.. .|.|++||. |..|+..
T Consensus 261 ~~~~C~C~~G~----~G~~C~~~C~~G~~G~~C~~-~C~C~ngg~C~~~~---~C~C~~G~~----G~~Ce~~ 321 (423)
T 2gy5_A 261 DPYGCSCATGW----KGLQCNEACHPGFYGPDCKL-RCSCNNGEMCDRFQ---GCLCSPGWQ----GLQCERE 321 (423)
T ss_dssp TTTEEECCBTC----BSGGGCBCCCTTBCSBTTCC-BCCCTTCCEEETTT---EEECCTTCB----STTSCBC
T ss_pred CCCeEEeCCCc----ccccccCccCCCCcCCcccc-cccCCCCCEecCCC---ceECCCCCc----CCCCccC
Confidence 56799999999 6777743 122322 113765 7898765 399999999 8889743
No 57
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.51 E-value=1.6e-07 Score=83.59 Aligned_cols=83 Identities=35% Similarity=0.845 Sum_probs=62.9
Q ss_pred CCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCCCCC
Q psy11800 51 NVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQNGMC 130 (220)
Q Consensus 51 ~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~~~c 130 (220)
++++|..+++.|. ..|+++.++|.|.|++||.+ .+++.|+++++|.. ...|
T Consensus 293 ~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~---------------------------~~~C 343 (699)
T 1n7d_A 293 GTNECLDNNGGCS-HVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------------------PDTC 343 (699)
T ss_dssp CCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSS---------------------------SSSC
T ss_pred ccccccccccCcC-CCcccCCCCcEEeCCCCeEc-CCCCcccCccccCC---------------------------CCcc
Confidence 4677776555564 47999999999999999987 56778888766542 2334
Q ss_pred CCceEecCCCCeEeecCCCcEeCCCCCceeecC
Q psy11800 131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVD 163 (220)
Q Consensus 131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~ 163 (220)
. ++|++..++|+|.|.+||.+...++.|.++.
T Consensus 344 ~-~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~ 375 (699)
T 1n7d_A 344 S-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVG 375 (699)
T ss_dssp T-TTCCBCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred c-cccccCCCCeeeeeecccccCCCCCcccccc
Confidence 3 3789999999999999999887778886553
No 58
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.47 E-value=1.3e-07 Score=83.28 Aligned_cols=123 Identities=30% Similarity=0.737 Sum_probs=85.2
Q ss_pred CC-CCCeeeeCCCceEeeCCCCCccCCCCCCccC-C---------CcccCC---------C--CCCccccc------ccc
Q psy11800 61 IC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVD-R---------DECRTP---------G--DHDECSQK------KKK 112 (220)
Q Consensus 61 ~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~-~---------~~C~~~---------~--~~~~C~c~------~~~ 112 (220)
.| .+|.|.. ..|.|.+||.+. .|+- . ..|... + ....|.|. .+|
T Consensus 436 ~Cs~~G~C~~----g~C~C~~Gy~G~----~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~ 507 (687)
T 3k6s_B 436 LCHGKGFLEC----GICRCDTGYIGK----NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLI 507 (687)
T ss_dssp TGGGSEEESS----SSEEECSSEEST----TSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCE
T ss_pred CCCCCCEEeC----CEeEcCCCCcCC----cccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCc
Confidence 47 5678863 469999999853 3330 0 123321 1 13478898 999
Q ss_pred ccccccccccccCCC--CCCC---CceEecCCCCeEeecCCCcEeCCCCCcee---ecCcCCCC-CCCCCC-CeEecCCC
Q psy11800 113 KKKKKKLYHDECSQN--GMCA---NGMCINMDGSFKCQCKPGFVLSPTGHACI---DVDECYEN-PLICLN-GRCDNTLG 182 (220)
Q Consensus 113 ~~~~~~~~~~~C~~~--~~c~---~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~i~~C~~~-~~~C~~-~~C~~~~~ 182 (220)
+|..|+.+...|... ..|. +|+|.. + +|.|.+|| .|..|. +++.|... ...|.+ |.|..
T Consensus 508 ~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~----~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--- 576 (687)
T 3k6s_B 508 YGQYCECDTINCERYNGQVCGGPGRGLCFC--G--KCRCHPGF----EGSACQCERTTEGCLNPRRVECSGRGRCRC--- 576 (687)
T ss_dssp ESTTSCEESSCSCEETTEETSHHHHEEEET--T--EEEECTTC----CSTTSCSCCSSCTTBCTTCSBTSSSCCBCS---
T ss_pred cccccccccccccCCCCcCcCCCCCCeEEC--C--EEEcCCCC----cCCCCccCCCCCCCCCCCCCCCCCCCcCCC---
Confidence 999999877888642 3354 578885 2 89999999 788884 35778753 235875 88976
Q ss_pred CeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800 183 SYRCACQPGYSPSPDGGFCVDRDEC 207 (220)
Q Consensus 183 ~~~C~C~~G~~~~~~g~~C~~~~~C 207 (220)
..|.|.+||. |..|+....|
T Consensus 577 -g~C~C~~Gy~----G~~Ce~c~~C 596 (687)
T 3k6s_B 577 -NVCECHSGYQ----LPLCQECPGC 596 (687)
T ss_dssp -SCBCCSTTCC----TTTTCCCTTS
T ss_pred -CEEECCCCCc----CCCCCCCCCC
Confidence 3699999999 8899764445
No 59
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.44 E-value=1.7e-07 Score=55.03 Aligned_cols=41 Identities=24% Similarity=0.633 Sum_probs=33.1
Q ss_pred Cce-eecCcCCCCCCCCCC-CeEe-----cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 157 HAC-IDVDECYENPLICLN-GRCD-----NTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 157 ~~C-~~i~~C~~~~~~C~~-~~C~-----~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
.+| +++++|.+++ |.| |+|. +..++|.|.|++||. |++|+.
T Consensus 2 ~~c~~~~~eC~s~p--C~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~ 49 (55)
T 3u7u_G 2 TSHLVKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN 49 (55)
T ss_dssp -CCEEECCSTTTTT--SCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred CCCcccCCCCcCCC--CCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence 345 6899999888 998 8994 567899999999999 999974
No 60
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.39 E-value=1.1e-07 Score=55.28 Aligned_cols=42 Identities=24% Similarity=0.483 Sum_probs=35.7
Q ss_pred CCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCC
Q psy11800 168 NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTP 210 (220)
Q Consensus 168 ~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~ 210 (220)
.++.|.+ .|+|+.++|.|.|++||.|..++++|++++|+...
T Consensus 4 ~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pCg 45 (51)
T 1kig_L 4 DNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCG 45 (51)
T ss_dssp TTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCTT
T ss_pred CCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcccCC
Confidence 3445764 79999999999999999999999999999998544
No 61
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.38 E-value=3.7e-07 Score=49.81 Aligned_cols=36 Identities=47% Similarity=1.119 Sum_probs=31.7
Q ss_pred ecCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 161 DVDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
++++|...+ |.+ ++|++..++|.|.|++||. |+.|+
T Consensus 2 d~d~C~~~p--C~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCCTTTTCC--CCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred ccccCCCCC--CCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 678998776 987 8999999999999999998 88775
No 62
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.36 E-value=1.9e-07 Score=54.68 Aligned_cols=46 Identities=28% Similarity=0.543 Sum_probs=37.1
Q ss_pred CCCCCCCCCCCeEecCCC-CeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800 165 CYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECRTPG 211 (220)
Q Consensus 165 C~~~~~~C~~~~C~~~~~-~~~C~C~~G~~~~~~g~~C~~~~~C~~~~ 211 (220)
|+...+.|.+ .|+++.+ +|.|.|++||.|..+++.|++++||....
T Consensus 2 C~~~nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~cg~ 48 (53)
T 2bz6_L 2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGK 48 (53)
T ss_dssp TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTTC
T ss_pred CcCCCCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccCCC
Confidence 3333334765 8999998 79999999999999999999999986443
No 63
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.30 E-value=4.2e-07 Score=53.38 Aligned_cols=42 Identities=26% Similarity=0.626 Sum_probs=31.2
Q ss_pred CCCC-CCCCccCCCCCCC-CCCee-----eeCCCceEeeCCCCCccCCCCCCccC
Q psy11800 46 GVSD-LNVDECYENPLIC-LNGRC-----DNTLGSYRCACQPGYSPSPDGGFCVD 93 (220)
Q Consensus 46 g~~C-~~i~~C~~~~~~C-~~~~C-----~~~~g~~~C~C~~g~~~~~~~~~C~~ 93 (220)
|..| .+++||.++| | +.|+| ++..++|+|.|++||+ |..|+.
T Consensus 1 G~~c~~~~~eC~s~p--C~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN 49 (55)
T ss_dssp --CCEEECCSTTTTT--SCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred CCCCcccCCCCcCCC--CCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence 3456 6799999988 9 56999 4567889999999998 566653
No 64
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.30 E-value=1.1e-06 Score=47.91 Aligned_cols=32 Identities=38% Similarity=0.984 Sum_probs=28.2
Q ss_pred CCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCcc
Q psy11800 51 NVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSP 84 (220)
Q Consensus 51 ~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~ 84 (220)
++++|..+| | ++++|++..++|.|.|++||.+
T Consensus 2 d~d~C~~~p--C~ngg~C~~~~~~~~C~C~~G~~G 34 (39)
T 1edm_B 2 DGDQCESNP--CLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CCCTTTTCC--CCTTCEEEEETTEEEEECCTTCCS
T ss_pred ccccCCCCC--CCCCCEeEcCCCceEeECCCCCcC
Confidence 678998877 9 5589999999999999999983
No 65
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.27 E-value=4.8e-07 Score=55.89 Aligned_cols=49 Identities=27% Similarity=0.467 Sum_probs=41.5
Q ss_pred CCCCCccCCCCCCCCCCeeeeCCC-ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800 49 DLNVDECYENPLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECR 98 (220)
Q Consensus 49 C~~i~~C~~~~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~~~~C~ 98 (220)
.+|+++|..+.+.|.+ .|+++.+ +|.|.|++||.+..++++|.++++|.
T Consensus 2 ~~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 2 KDDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CSCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CcccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 3578999876667854 8999998 89999999999999999999887664
No 66
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.26 E-value=3.9e-07 Score=53.77 Aligned_cols=45 Identities=22% Similarity=0.501 Sum_probs=37.3
Q ss_pred CccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCccc
Q psy11800 53 DECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 98 (220)
Q Consensus 53 ~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~ 98 (220)
|||...++.|.+ .|++++++|.|.|++||.+..++++|.++++|.
T Consensus 2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 567655555754 899999999999999999988899999887664
No 67
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.26 E-value=7.1e-07 Score=52.16 Aligned_cols=42 Identities=38% Similarity=0.905 Sum_probs=34.4
Q ss_pred eecCcCCCC--------CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 160 IDVDECYEN--------PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 160 ~~i~~C~~~--------~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
.+||+|... ...|.+ .|+|+.++|.|.|++||.+..+++.|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQH-LCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSS-EEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCCC-EeECCCCCeEEECCCCCeECCCCCccC
Confidence 368889763 245864 999999999999999999888888775
No 68
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.14 E-value=2.8e-06 Score=49.53 Aligned_cols=42 Identities=36% Similarity=0.854 Sum_probs=33.7
Q ss_pred CCCCccCCC--------CCCCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800 50 LNVDECYEN--------PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 92 (220)
Q Consensus 50 ~~i~~C~~~--------~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~ 92 (220)
++|+||... ...|. ..|++++++|.|.|++||.+..+++.|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~-~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ-HLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS-SEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCC-CEeECCCCCeEEECCCCCeECCCCCccC
Confidence 468888763 24485 4999999999999999999877777775
No 69
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.12 E-value=6.4e-06 Score=48.04 Aligned_cols=39 Identities=41% Similarity=0.846 Sum_probs=31.9
Q ss_pred ecCcCCCC-CCCCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 161 DVDECYEN-PLICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 161 ~i~~C~~~-~~~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
+|++|.+. ..+|.| |+|+ +..++|.|.|++||+ |..|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 57888865 123987 8999 788999999999998 889963
No 70
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.10 E-value=8.8e-06 Score=70.04 Aligned_cols=38 Identities=16% Similarity=0.118 Sum_probs=26.7
Q ss_pred CCcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccC
Q psy11800 19 GPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECY 56 (220)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~ 56 (220)
+.|.|.++|.|..|.++..++...++....+.+.+.+.
T Consensus 279 g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~ 316 (525)
T 4aqs_A 279 GHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 316 (525)
T ss_dssp CEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCC
T ss_pred ccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCccc
Confidence 45889999999999888777776666655554444433
No 71
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.98 E-value=7e-06 Score=50.94 Aligned_cols=39 Identities=31% Similarity=0.590 Sum_probs=30.0
Q ss_pred ecCcCCCCCCCCCC-CeEecCCCCeEEe-CCCCCccCCCCC
Q psy11800 161 DVDECYENPLICLN-GRCDNTLGSYRCA-CQPGYSPSPDGG 199 (220)
Q Consensus 161 ~i~~C~~~~~~C~~-~~C~~~~~~~~C~-C~~G~~~~~~g~ 199 (220)
+||||...++.|.+ +.|+|+.++|.|. +..||.....+.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~ 42 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE 42 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence 68999887777975 7999999999998 445666544444
No 72
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.98 E-value=7.5e-07 Score=53.47 Aligned_cols=46 Identities=28% Similarity=0.559 Sum_probs=37.0
Q ss_pred ceeecCcCCCCCCCCCC---CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800 158 ACIDVDECYENPLICLN---GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 208 (220)
Q Consensus 158 ~C~~i~~C~~~~~~C~~---~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~ 208 (220)
.+.++|+|.++| |.| ++|++..++|.|.|++||.. |..|++.++|.
T Consensus 7 ~~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C~ 55 (61)
T 2k2s_B 7 LSETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTCI 55 (61)
T ss_dssp CTTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEEE
T ss_pred hcCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEec
Confidence 356788998777 986 49999999999999999972 56787766665
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.96 E-value=1.4e-06 Score=52.29 Aligned_cols=44 Identities=30% Similarity=0.650 Sum_probs=34.4
Q ss_pred CCCCCCccCCCCCCC-CC--CeeeeCCCceEeeCCCCCc-cCCCCCCccCCCcc
Q psy11800 48 SDLNVDECYENPLIC-LN--GRCDNTLGSYRCACQPGYS-PSPDGGFCVDRDEC 97 (220)
Q Consensus 48 ~C~~i~~C~~~~~~C-~~--~~C~~~~g~~~C~C~~g~~-~~~~~~~C~~~~~C 97 (220)
.++++++|.++| | ++ ++|+++.++|.|.|++||. + ..|+...+|
T Consensus 7 ~~~~~d~C~snP--C~nga~gtC~~~~g~y~C~C~~Gy~~G----~~C~~~~~C 54 (61)
T 2k2s_B 7 LSETPAACSSNP--CGPEAAGTCKETNSGYICRCNQGYRIS----LDGTGNVTC 54 (61)
T ss_dssp CTTSCCHHHHCS--SCSSSCCEEEECSSEEEEECCTTEEEE----ECSSSCEEE
T ss_pred hcCCCCcCcCCC--CcCCCccccccCCCceEeECCCCCccC----CCCCCCCEe
Confidence 467789999888 9 44 6999999999999999998 4 345544334
No 74
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.96 E-value=4.1e-06 Score=49.98 Aligned_cols=41 Identities=22% Similarity=0.476 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCeEecCC-CCeEEeCCCCCccCCCCCCCCcCCC
Q psy11800 165 CYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDRDE 206 (220)
Q Consensus 165 C~~~~~~C~~~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~~~~ 206 (220)
|....+.|.+ .|+++. ++|.|.|++||.|..+++.|.++++
T Consensus 2 C~~~nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 2 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp TTTGGGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CcCCCCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 3333334765 899998 6999999999999999999987654
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.94 E-value=6.2e-06 Score=46.53 Aligned_cols=38 Identities=29% Similarity=0.754 Sum_probs=30.6
Q ss_pred ecCcCCC---CCCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCcC
Q psy11800 161 DVDECYE---NPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 161 ~i~~C~~---~~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
++++|.+ ++ |.||+|++.. ++|.|.|++||+ |..|+..
T Consensus 2 ~i~~C~~~~~~p--C~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGY--CLHGQCIYLVDMSQNYCRCEVGYT----GVRCEHF 44 (46)
T ss_dssp CEECCCTTCCSS--CSSEEEEEETTTTEEEEEECTTCS----STTSCCC
T ss_pred ccccCCCCCCCC--CCCCEeeccCCCCCEEEECCCCCc----cCCCCcc
Confidence 4677876 55 9889998754 689999999999 8999744
No 76
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.90 E-value=1.7e-05 Score=66.35 Aligned_cols=108 Identities=24% Similarity=0.538 Sum_probs=68.6
Q ss_pred ccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCc---------c----CCCcccCC---
Q psy11800 38 GLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFC---------V----DRDECRTP--- 100 (220)
Q Consensus 38 ~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C---------~----~~~~C~~~--- 100 (220)
+.|..+|.|..|+. .|. + | +++.|.+ +.+.|.|++||.+......| . ..+.|...
T Consensus 187 c~C~~g~~G~~C~~--~C~--~--C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 187 RRCEAQKWGPECNH--LCT--A--CMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp CSSCTTEESTTSCE--ECC--C--CCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred CcCCCCCCCCCCCC--CCC--C--CCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence 45666677877763 353 3 8 5689976 46789999999854322211 1 11223221
Q ss_pred -CCCCcccccccccccccccc------ccccCCCCCCC-CceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 101 -GDHDECSQKKKKKKKKKKLY------HDECSQNGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 101 -~~~~~C~c~~~~~~~~~~~~------~~~C~~~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
...+.|.|..+|.|..|+.. .+.|...-.|. +++|.+.. .|.|++|| .|..|.
T Consensus 259 ~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~----~G~~Ce 319 (423)
T 2gy5_A 259 LPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGW----QGLQCE 319 (423)
T ss_dssp ETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTC----BSTTSC
T ss_pred CCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCC----cCCCCc
Confidence 24688999999999988751 12343221344 47898764 49999999 777774
No 77
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.90 E-value=3.8e-06 Score=48.57 Aligned_cols=39 Identities=26% Similarity=0.545 Sum_probs=32.4
Q ss_pred CCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcc
Q psy11800 58 NPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97 (220)
Q Consensus 58 ~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C 97 (220)
+++.|.+ .|+++.++|+|.|++||.+..++++|.+++++
T Consensus 4 ~ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 4 DNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp TTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 3445743 79999999999999999998899999988664
No 78
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.87 E-value=1.9e-05 Score=44.28 Aligned_cols=35 Identities=40% Similarity=0.732 Sum_probs=27.3
Q ss_pred cCCCC-CCCCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 164 ECYEN-PLICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 164 ~C~~~-~~~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
+|.+. ..+|.| |+|+ +..++|.|.|++||. |..|+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 45544 113887 7998 678899999999999 89996
No 79
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.85 E-value=7.9e-07 Score=69.64 Aligned_cols=55 Identities=22% Similarity=0.552 Sum_probs=42.9
Q ss_pred eecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCCCCceE
Q psy11800 160 IDVDECYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGGKYTA 216 (220)
Q Consensus 160 ~~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~~~~~~ 216 (220)
.++|||..+.+.|+ ++.|+|+.++|.|.|.+||. .+|..|.++|+.....|.+.|
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~PqRvnGs~sG 58 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQRVNGKVKG 58 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEEEEEEEEEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCceeceeEeE
Confidence 37899987666797 48999999999999999998 568899999887666666655
No 80
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.81 E-value=1.7e-05 Score=49.18 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=40.1
Q ss_pred CCCCccCCCCCCC-CCCeeeeCCCceEee-CCCCCccCCCCCCccCCCcccCCCCCCcccccccccc
Q psy11800 50 LNVDECYENPLIC-LNGRCDNTLGSYRCA-CQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKK 114 (220)
Q Consensus 50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~-C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~ 114 (220)
++||||...++.| .++.|+|+.++|+|. +..||.+..++..+.. .+... ...+.|..||..
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~--~~~~~--~~~~~C~~Gy~~ 63 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPP--PVPPA--QHPNPCPPGYEP 63 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCC--SSCSC--SSCCCSCTTEEE
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcccc--ccccC--ccccCCCCCeee
Confidence 3789998766679 457999999999997 5568887655543321 11111 124467778764
No 81
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.80 E-value=1.4e-05 Score=48.32 Aligned_cols=43 Identities=30% Similarity=0.635 Sum_probs=35.3
Q ss_pred cCcCCCCCCCCCC-CeEec-----CCCCeEEeCCCCCccCCCCCCCC-cCCCCCCC
Q psy11800 162 VDECYENPLICLN-GRCDN-----TLGSYRCACQPGYSPSPDGGFCV-DRDECRTP 210 (220)
Q Consensus 162 i~~C~~~~~~C~~-~~C~~-----~~~~~~C~C~~G~~~~~~g~~C~-~~~~C~~~ 210 (220)
.++|..++ |.| |+|++ ..++|.|.|++||. |..|+ +++++...
T Consensus 6 c~~C~~~p--C~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~~ 55 (63)
T 1hae_A 6 CAEKEKTF--CVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQN 55 (63)
T ss_dssp CCHHHHTT--SCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCTT
T ss_pred cCCCCCCc--CCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCccccc
Confidence 46677666 987 89986 66899999999999 99996 78888754
No 82
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.76 E-value=1.2e-05 Score=46.88 Aligned_cols=39 Identities=31% Similarity=0.563 Sum_probs=32.4
Q ss_pred CCCCCCCeeeeCCC-ceEeeCCCCCccCCCCCCccCCCccc
Q psy11800 59 PLICLNGRCDNTLG-SYRCACQPGYSPSPDGGFCVDRDECR 98 (220)
Q Consensus 59 ~~~C~~~~C~~~~g-~~~C~C~~g~~~~~~~~~C~~~~~C~ 98 (220)
.+.|.+ .|+++.+ +|+|.|++||.+..++++|.++++|.
T Consensus 6 nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 6 NGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 344643 7999998 79999999999998999999887663
No 83
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.76 E-value=2.8e-05 Score=43.83 Aligned_cols=37 Identities=30% Similarity=0.807 Sum_probs=29.0
Q ss_pred CCCccCC---CCCCCCCCeeeeCC--CceEeeCCCCCccCCCCCCccC
Q psy11800 51 NVDECYE---NPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVD 93 (220)
Q Consensus 51 ~i~~C~~---~~~~C~~~~C~~~~--g~~~C~C~~g~~~~~~~~~C~~ 93 (220)
++++|.. +| |.||+|++.. ++|.|.|++||+ |..|+.
T Consensus 2 ~i~~C~~~~~~p--C~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGY--CLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSS--CSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCC--CCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 5778887 67 9569999754 689999999998 556653
No 84
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.74 E-value=3.2e-05 Score=45.03 Aligned_cols=37 Identities=38% Similarity=0.826 Sum_probs=29.5
Q ss_pred CCCccCCC---CCCC-CCCeee--eCCCceEeeCCCCCccCCCCCCccC
Q psy11800 51 NVDECYEN---PLIC-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCVD 93 (220)
Q Consensus 51 ~i~~C~~~---~~~C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~~ 93 (220)
+|++|.++ | | ++++|+ +..++|.|.|++||+ |..|+.
T Consensus 2 ~i~~C~~~~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGY--CLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCS--SCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCc--CCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 46788875 6 9 558999 788999999999998 556654
No 85
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.68 E-value=4.5e-05 Score=57.86 Aligned_cols=88 Identities=25% Similarity=0.554 Sum_probs=55.5
Q ss_pred Ccccccccccccccccccc---------ccCC---CCCCC-CceEecCCCCeEeecCCCcEeC--CCCCcee-ecCcCCC
Q psy11800 104 DECSQKKKKKKKKKKLYHD---------ECSQ---NGMCA-NGMCINMDGSFKCQCKPGFVLS--PTGHACI-DVDECYE 167 (220)
Q Consensus 104 ~~C~c~~~~~~~~~~~~~~---------~C~~---~~~c~-~~~C~~~~~~~~C~C~~G~~~~--~~g~~C~-~i~~C~~ 167 (220)
+.|.|.++|+|..|+...+ .|.. ...|. +|+|+. .+|.|.+||... -.|..|. +++.|..
T Consensus 107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~ 182 (217)
T 2p28_B 107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCER 182 (217)
T ss_dssp TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCE
T ss_pred CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCC
Confidence 4566666666666654322 3432 23353 578984 279999993100 0677884 5677864
Q ss_pred C-CCCCC-C--CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 168 N-PLICL-N--GRCDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 168 ~-~~~C~-~--~~C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
. ...|. + |+|.. ..|.|.+||. |..|+.
T Consensus 183 ~~g~~C~~~~~G~C~~----g~C~C~~G~~----G~~C~~ 214 (217)
T 2p28_B 183 YNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQH 214 (217)
T ss_dssp ETTEETTCTTTEEEET----TEEEECTTEE----STTSCE
T ss_pred CCCCCCCCCCCcEEeC----CeeECCCCCc----cCCcCC
Confidence 3 12375 4 78985 2799999999 888863
No 86
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.68 E-value=6.6e-05 Score=66.18 Aligned_cols=92 Identities=27% Similarity=0.702 Sum_probs=65.6
Q ss_pred CCcccccccccccccccccc---------ccCCCC---CC-CCceEecCCCCeEeecC------CCcEeCCCCCcee-ec
Q psy11800 103 HDECSQKKKKKKKKKKLYHD---------ECSQNG---MC-ANGMCINMDGSFKCQCK------PGFVLSPTGHACI-DV 162 (220)
Q Consensus 103 ~~~C~c~~~~~~~~~~~~~~---------~C~~~~---~c-~~~~C~~~~~~~~C~C~------~G~~~~~~g~~C~-~i 162 (220)
.+.|.|..||+|..|+...+ .|.... .| .+|.|+. + +|.|. +|| .|..|. ++
T Consensus 445 ~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~----~G~~Ce~~~ 516 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLI----YGQYCECDT 516 (687)
T ss_dssp SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCE----ESTTSCEES
T ss_pred CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCc----ccccccccc
Confidence 46899999999999986443 475432 35 4589984 2 89999 999 788883 67
Q ss_pred CcCCCC-CCCCC---CCeEecCCCCeEEeCCCCCccCCCCCCCC---cCCCCCCC
Q psy11800 163 DECYEN-PLICL---NGRCDNTLGSYRCACQPGYSPSPDGGFCV---DRDECRTP 210 (220)
Q Consensus 163 ~~C~~~-~~~C~---~~~C~~~~~~~~C~C~~G~~~~~~g~~C~---~~~~C~~~ 210 (220)
+.|... ...|. +|.|.. + .|.|.+||. |..|+ .++.|...
T Consensus 517 ~~C~~~~~~~C~~~~~G~C~~--g--~C~C~~G~~----G~~Cec~~~~~~C~~~ 563 (687)
T 3k6s_B 517 INCERYNGQVCGGPGRGLCFC--G--KCRCHPGFE----GSACQCERTTEGCLNP 563 (687)
T ss_dssp SCSCEETTEETSHHHHEEEET--T--EEEECTTCC----STTSCSCCSSCTTBCT
T ss_pred ccccCCCCcCcCCCCCCeEEC--C--EEEcCCCCc----CCCCccCCCCCCCCCC
Confidence 778632 22375 468875 2 799999999 88886 24666643
No 87
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.67 E-value=6.3e-06 Score=69.80 Aligned_cols=79 Identities=32% Similarity=0.763 Sum_probs=34.9
Q ss_pred ccccccccccccccccccccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCCC
Q psy11800 105 ECSQKKKKKKKKKKLYHDECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLGS 183 (220)
Q Consensus 105 ~C~c~~~~~~~~~~~~~~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~~ 183 (220)
...|..+|.+..|.. +.|.. .|.+++|+.. ++|.|.+|| .|..|. ++.|.. .|.+ ++|++.
T Consensus 378 p~~C~~~~~g~~c~~--~~C~~--~C~nG~C~~~---~~C~C~~G~----~G~~C~-~~~C~~---~C~~~g~C~~~--- 439 (463)
T 2wg3_C 378 PEECRATVQPAQTLT--SECSR--LCRNGYCTPT---GKCCCSPGW----EGDFCR-TAKCEP---ACRHGGVCVRP--- 439 (463)
T ss_dssp CGGGCCCCCCCCCCC--CHHHH--HCCSEEECTT---SCEEECTTE----ESTTSC-EECC-------------------
T ss_pred cccCCCCCcCCCCcc--ccccC--CCCCCccCCC---CeECCCCCc----CCCcCC-cCcCCC---CCCCCCEECCC---
Confidence 356677777776654 55643 3667899764 389999999 677883 567875 4986 799865
Q ss_pred eEEeCCCCCccCCCCCCCCcCC
Q psy11800 184 YRCACQPGYSPSPDGGFCVDRD 205 (220)
Q Consensus 184 ~~C~C~~G~~~~~~g~~C~~~~ 205 (220)
+.|.|.+||. |..|+..+
T Consensus 440 ~~C~C~~G~~----G~~C~~~~ 457 (463)
T 2wg3_C 440 NKCLCKKGYL----GPQCEQVD 457 (463)
T ss_dssp ----------------------
T ss_pred CEEECCCCcc----cCCCCCCc
Confidence 6899999999 88887543
No 88
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.67 E-value=0.00023 Score=46.65 Aligned_cols=70 Identities=29% Similarity=0.582 Sum_probs=55.2
Q ss_pred CCceEec-CCCCeEeecCCCcEeCCCCCceeecCc-CCCCCCCCC-CCeEecCC-CCeEEeCCCCCccC-CCCCCCC
Q psy11800 131 ANGMCIN-MDGSFKCQCKPGFVLSPTGHACIDVDE-CYENPLICL-NGRCDNTL-GSYRCACQPGYSPS-PDGGFCV 202 (220)
Q Consensus 131 ~~~~C~~-~~~~~~C~C~~G~~~~~~g~~C~~i~~-C~~~~~~C~-~~~C~~~~-~~~~C~C~~G~~~~-~~g~~C~ 202 (220)
.++.|+. .++...|+|..||.. ++..|..+++ |..+.+.|. ++.|+... ..-.|.|.++|... .+|.+|.
T Consensus 20 ~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 20 ENAACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp TTEEEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred CCCCeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence 4678887 678889999999988 6888977788 877766797 59999886 78899999997521 2455554
No 89
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.52 E-value=0.00023 Score=46.40 Aligned_cols=70 Identities=27% Similarity=0.597 Sum_probs=53.4
Q ss_pred CCceEec-CCCCeEeecCCCcEeCCCCCceeec--CcCCCCCCCCC-CCeEecCC-----CCeEEeCCCCCccC-CCCCC
Q psy11800 131 ANGMCIN-MDGSFKCQCKPGFVLSPTGHACIDV--DECYENPLICL-NGRCDNTL-----GSYRCACQPGYSPS-PDGGF 200 (220)
Q Consensus 131 ~~~~C~~-~~~~~~C~C~~G~~~~~~g~~C~~i--~~C~~~~~~C~-~~~C~~~~-----~~~~C~C~~G~~~~-~~g~~ 200 (220)
.++.|.. .++...|+|.+||.+ ++..|..+ +.|+.+...|. +|.|+... +...|.|.+||... .+|.+
T Consensus 14 ~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf 91 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIF 91 (99)
T ss_dssp TTEEEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTE
T ss_pred CCCCeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEE
Confidence 4678877 467889999999988 67889766 58987767797 59999875 57899999998621 23555
Q ss_pred CC
Q psy11800 201 CV 202 (220)
Q Consensus 201 C~ 202 (220)
|.
T Consensus 92 ~~ 93 (99)
T 1ob1_C 92 CS 93 (99)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 90
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.37 E-value=0.00019 Score=40.07 Aligned_cols=33 Identities=36% Similarity=0.699 Sum_probs=25.0
Q ss_pred ccCCC---CCCC-CCCeee--eCCCceEeeCCCCCccCCCCCCcc
Q psy11800 54 ECYEN---PLIC-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCV 92 (220)
Q Consensus 54 ~C~~~---~~~C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~ 92 (220)
+|.++ | | ++++|+ +..++|+|.|++||+ +..|+
T Consensus 2 ~C~~~~~~p--C~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGY--CLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCTTCCSSC--CSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CcccCCCCC--CCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 45554 6 8 558998 677899999999998 55554
No 91
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.35 E-value=2.4e-05 Score=61.26 Aligned_cols=45 Identities=24% Similarity=0.667 Sum_probs=34.5
Q ss_pred CCCCccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCc
Q psy11800 50 LNVDECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDE 96 (220)
Q Consensus 50 ~~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~ 96 (220)
+++|||....+.| .++.|+|+.++|.|.|.+||.+ ++..|.+++.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCC
Confidence 4789998655669 6789999999999999999986 5778887654
No 92
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.30 E-value=0.00015 Score=52.84 Aligned_cols=53 Identities=34% Similarity=0.724 Sum_probs=42.0
Q ss_pred CCcEeCCCCCceeecCcCCCCCCC---CCCCeEecCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800 148 PGFVLSPTGHACIDVDECYENPLI---CLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 148 ~G~~~~~~g~~C~~i~~C~~~~~~---C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
.||.+ ...+.++++|...+.. |.+ .|+++.++|.|.|++||.+..+++.|+++
T Consensus 113 ~Gf~~---~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEA---FYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEE---EEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCcee---eeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 56643 1235788999876543 876 89999999999999999998899999765
No 93
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.27 E-value=2.5e-05 Score=45.31 Aligned_cols=41 Identities=32% Similarity=0.649 Sum_probs=31.4
Q ss_pred eEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEec----CCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 142 FKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDN----TLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 142 ~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~----~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
++|.|++||. .++ |.| |+|++ ..++|.|.|++||. |..|+.
T Consensus 3 ~~C~C~~g~~---------------~~p--C~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD---------------AWY--CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY 48 (52)
T ss_dssp CCBCCCHHHH---------------HHT--SCTTCEEEEEEETTEEEEEEECCTTEE----STTSCE
T ss_pred eeeECCCCCc---------------CCc--CCCCCEEecCccCCCCCEEEECCCCCc----CCCCcc
Confidence 3688888882 123 777 79986 35689999999999 888873
No 94
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.24 E-value=0.0001 Score=53.21 Aligned_cols=41 Identities=32% Similarity=0.822 Sum_probs=32.7
Q ss_pred CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCC
Q psy11800 163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT 209 (220)
Q Consensus 163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~ 209 (220)
++|...+ |.+ +.|.+..++|.|+|++||. |..|+.+++|+.
T Consensus 120 ~~c~~~~--C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMS--CSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD 161 (162)
T ss_dssp CCCCTTG--GGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred CCCcCCC--CCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence 4565554 875 8999999999999999999 899999999975
No 95
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.21 E-value=0.00017 Score=42.89 Aligned_cols=35 Identities=23% Similarity=0.512 Sum_probs=29.2
Q ss_pred CCCCCCCeeeeCC-CceEeeCCCCCccCCCCCCccCC
Q psy11800 59 PLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDR 94 (220)
Q Consensus 59 ~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~~ 94 (220)
.+.|.+ .|++++ ++|.|.|++||.+..++++|.++
T Consensus 6 nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 6 NGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp GGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred CCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence 344643 899998 69999999999999899999875
No 96
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.13 E-value=0.00028 Score=42.45 Aligned_cols=42 Identities=29% Similarity=0.606 Sum_probs=30.6
Q ss_pred cccCCCCCCCCceEec-----CCCCeEeecCCCcEeCCCCCce-eecCcCCC
Q psy11800 122 DECSQNGMCANGMCIN-----MDGSFKCQCKPGFVLSPTGHAC-IDVDECYE 167 (220)
Q Consensus 122 ~~C~~~~~c~~~~C~~-----~~~~~~C~C~~G~~~~~~g~~C-~~i~~C~~ 167 (220)
++|...++.++|+|++ ..++|+|.|++|| .|..| .+++++..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf----~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF----TGARCTENVPMKVQ 54 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE----ESTTSCEECCSSCT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCC----cCCccCcCcCcccc
Confidence 4554444334589986 5678999999999 78889 57887754
No 97
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.03 E-value=0.00053 Score=49.87 Aligned_cols=52 Identities=27% Similarity=0.527 Sum_probs=42.4
Q ss_pred cccccccccccccccCCCCC----CCCceEecCCCCeEeecCCCcEeCCCCCceeec
Q psy11800 110 KKKKKKKKKLYHDECSQNGM----CANGMCINMDGSFKCQCKPGFVLSPTGHACIDV 162 (220)
Q Consensus 110 ~~~~~~~~~~~~~~C~~~~~----c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i 162 (220)
.||.+.....++++|..... |.+ .|++..++|.|.|.+||.+..++..|.++
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCceeeeeccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 67877777778899975432 655 79999999999999999998888888654
No 98
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.92 E-value=0.0006 Score=58.60 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=35.3
Q ss_pred CCcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccCCCCCCC-CCCeeeeC----CCceEeeCCCCCc
Q psy11800 19 GPAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECYENPLIC-LNGRCDNT----LGSYRCACQPGYS 83 (220)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C-~~~~C~~~----~g~~~C~C~~g~~ 83 (220)
+.|.|.+++.|..|..+..++. |..|.+.+.|...+ | ..+.|.+. ...+.|.|++||.
T Consensus 407 ~~C~C~~g~~G~~C~~C~~Gy~-----G~~c~~~~~C~~C~--C~~~gtc~~~~~Cd~~tg~C~C~~g~~ 469 (525)
T 4aqs_A 407 GQCRCKLHVEGERCDVCKEGFY-----DLSAEDPYGCKSCA--CNPLGTIPGGNPCDSETGYCYCKRLVT 469 (525)
T ss_dssp SCCCBCTTEETTTTCEECTTEE-----CCCTTSTTSSEECC--CCTTTBCCSSCCBCTTTCCBCBCTTCC
T ss_pred CccCCCCCCCCCcccCCCCCCc-----CCCCCCCCCCccCC--CCCCceecCCCcccCCCCEEECCCCCc
Confidence 4566777777777665555544 66676666666544 5 33454432 2345688888887
No 99
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.86 E-value=0.00049 Score=54.29 Aligned_cols=50 Identities=30% Similarity=0.585 Sum_probs=41.6
Q ss_pred ecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800 161 DVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPG 211 (220)
Q Consensus 161 ~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~~~ 211 (220)
+.|||... ++.|.+ .|.++.++|.|.|..||.+..+++.|.+.++|....
T Consensus 1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~ 51 (283)
T 3f1s_B 1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGV 51 (283)
T ss_dssp --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTC
T ss_pred CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccccCc
Confidence 35789866 567876 899999999999999999999999999988887653
No 100
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.78 E-value=0.00028 Score=59.75 Aligned_cols=76 Identities=34% Similarity=0.856 Sum_probs=29.1
Q ss_pred cccccCCCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCcccccccccccc
Q psy11800 37 TGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKK 116 (220)
Q Consensus 37 ~~~~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~ 116 (220)
...|...+.+..|+ +++|.. + |.++.|++. +.|.|.+||+ +..|+ +
T Consensus 378 p~~C~~~~~g~~c~-~~~C~~-~--C~nG~C~~~---~~C~C~~G~~----G~~C~-~---------------------- 423 (463)
T 2wg3_C 378 PEECRATVQPAQTL-TSECSR-L--CRNGYCTPT---GKCCCSPGWE----GDFCR-T---------------------- 423 (463)
T ss_dssp CGGGCCCCCCCCCC-CCHHHH-H--CCSEEECTT---SCEEECTTEE----STTSC-E----------------------
T ss_pred cccCCCCCcCCCCc-cccccC-C--CCCCccCCC---CeECCCCCcC----CCcCC-c----------------------
Confidence 34455556666665 366764 3 766788653 3688888887 44452 1
Q ss_pred ccccccccCCCCCCC-CceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 117 KKLYHDECSQNGMCA-NGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 117 ~~~~~~~C~~~~~c~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
+.|.. .|. +++|++. ++|.|.+|| .|..|.
T Consensus 424 -----~~C~~--~C~~~g~C~~~---~~C~C~~G~----~G~~C~ 454 (463)
T 2wg3_C 424 -----AKCEP--ACRHGGVCVRP---NKCLCKKGY----LGPQCE 454 (463)
T ss_dssp -----ECC-------------------------------------
T ss_pred -----CcCCC--CCCCCCEECCC---CEEECCCCc----ccCCCC
Confidence 34533 444 4688765 589999999 777774
No 101
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=96.59 E-value=0.0015 Score=49.40 Aligned_cols=88 Identities=27% Similarity=0.593 Sum_probs=56.1
Q ss_pred CCC-CCCeeeeCCCceEeeCCCCCccCCCC------------CCccC---CCcccCCC--CCCccccccc------cccc
Q psy11800 60 LIC-LNGRCDNTLGSYRCACQPGYSPSPDG------------GFCVD---RDECRTPG--DHDECSQKKK------KKKK 115 (220)
Q Consensus 60 ~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~------------~~C~~---~~~C~~~~--~~~~C~c~~~------~~~~ 115 (220)
..| .+|.|+. ..|.|.+||.+.... ..|.. ...|...+ ....|.|..+ |+|.
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g~C~C~~gw~~~~~~~G~ 171 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQ 171 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETTEEEECCCCSTTCCEEST
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCCceECCCCCCCcccEECC
Confidence 347 5689974 479999999854311 01221 11222111 2357889999 6999
Q ss_pred cccccccccCCC--CCCC-C--ceEecCCCCeEeecCCCcEeCCCCCce
Q psy11800 116 KKKLYHDECSQN--GMCA-N--GMCINMDGSFKCQCKPGFVLSPTGHAC 159 (220)
Q Consensus 116 ~~~~~~~~C~~~--~~c~-~--~~C~~~~~~~~C~C~~G~~~~~~g~~C 159 (220)
+|+.+.+.|... ..|. + |+|... +|.|.+|| .|..|
T Consensus 172 ~Ce~~~~~C~~~~g~~C~~~~~G~C~~g----~C~C~~G~----~G~~C 212 (217)
T 2p28_B 172 YCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGF----EGSAC 212 (217)
T ss_dssp TSCEESSCSCEETTEETTCTTTEEEETT----EEEECTTE----ESTTS
T ss_pred CcccCCccCCCCCCCCCCCCCCcEEeCC----eeECCCCC----ccCCc
Confidence 998777778643 2353 4 899852 89999999 66666
No 102
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.47 E-value=0.0012 Score=38.22 Aligned_cols=29 Identities=41% Similarity=0.962 Sum_probs=24.7
Q ss_pred CCCC-CeEe--cCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 171 ICLN-GRCD--NTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 171 ~C~~-~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
+|.| |+|+ +..++|.|.|++||. |..|+.
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 44 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYI----GERCQY 44 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence 4887 7998 677889999999999 999963
No 103
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.29 E-value=0.0018 Score=46.49 Aligned_cols=41 Identities=29% Similarity=0.756 Sum_probs=29.9
Q ss_pred ccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCC
Q psy11800 123 ECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYE 167 (220)
Q Consensus 123 ~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~ 167 (220)
+|....+-.+++|++..++|+|+|++|| .|..|+.+++|..
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~----~G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGF----YGPECEYVRDDDD 161 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTE----ESTTSCEECC---
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCC----cCcccccCcccCC
Confidence 4443333345899999999999999999 7788988888864
No 104
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.24 E-value=0.0038 Score=44.60 Aligned_cols=45 Identities=31% Similarity=0.691 Sum_probs=35.4
Q ss_pred ceeecCcCCCC-CCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 158 ACIDVDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 158 ~C~~i~~C~~~-~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
.+.++++|... ...|.+ .|.+..++|.|.|.+||.+..+++.|++
T Consensus 113 ~~~d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 113 VATDINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEEECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ecccCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence 35678999753 234754 8999999999999999999888888864
No 105
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=96.03 E-value=0.006 Score=43.94 Aligned_cols=27 Identities=26% Similarity=0.613 Sum_probs=19.8
Q ss_pred C-CCCeeeeCC--CceEe-eCCCCCccCCCCCCcc
Q psy11800 62 C-LNGRCDNTL--GSYRC-ACQPGYSPSPDGGFCV 92 (220)
Q Consensus 62 C-~~~~C~~~~--g~~~C-~C~~g~~~~~~~~~C~ 92 (220)
| ++++|.... +.++| .|+++|. +..|+
T Consensus 3 C~~~g~C~~~~~~g~~~C~~C~~g~~----G~~Ce 33 (162)
T 1klo_A 3 CPGGSSCAIVPKTKEVVCTHCPTGTA----GKRCE 33 (162)
T ss_dssp SCTTCCEEECSSSCCEEECSCCTTEE----STTSC
T ss_pred CcCcCcccccCCCCCEEeCCCCCCCc----CCCCc
Confidence 6 457898765 57899 6999998 45554
No 106
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.75 E-value=0.0056 Score=35.29 Aligned_cols=27 Identities=41% Similarity=1.016 Sum_probs=21.6
Q ss_pred C-CCCeee--eCCCceEeeCCCCCccCCCCCCcc
Q psy11800 62 C-LNGRCD--NTLGSYRCACQPGYSPSPDGGFCV 92 (220)
Q Consensus 62 C-~~~~C~--~~~g~~~C~C~~g~~~~~~~~~C~ 92 (220)
| +.++|+ +..++|.|.|++||+ |..|+
T Consensus 14 C~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 14 CLHDGVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp ECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred CCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 8 458998 667889999999998 55564
No 107
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.68 E-value=0.0034 Score=50.92 Aligned_cols=41 Identities=34% Similarity=0.809 Sum_probs=25.8
Q ss_pred CCccCCCCCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCC
Q psy11800 52 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDR 94 (220)
Q Consensus 52 i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~ 94 (220)
||||. .++.|.+ .|+++.++|.|.|.+||.+..++++|...
T Consensus 1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~ 41 (349)
T 3v64_C 1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKAL 41 (349)
T ss_dssp ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEES
T ss_pred CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccc
Confidence 47887 4566864 99999999999999999998888888643
No 108
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.62 E-value=0.012 Score=33.45 Aligned_cols=34 Identities=29% Similarity=0.714 Sum_probs=26.4
Q ss_pred CCCCCCeEecC--CCCeEEeCCCCCccCCCCCCCCcCCCC
Q psy11800 170 LICLNGRCDNT--LGSYRCACQPGYSPSPDGGFCVDRDEC 207 (220)
Q Consensus 170 ~~C~~~~C~~~--~~~~~C~C~~G~~~~~~g~~C~~~~~C 207 (220)
..|.||+|... ...+.|+|++||. |..|+..+.+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~dL~ 49 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHADLL 49 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCc----ccCCCceeec
Confidence 34778888753 4678999999999 9999866543
No 109
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.58 E-value=0.0042 Score=36.57 Aligned_cols=29 Identities=38% Similarity=0.902 Sum_probs=23.4
Q ss_pred CCC-CeEec----CCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800 172 CLN-GRCDN----TLGSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 172 C~~-~~C~~----~~~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
|.| |+|+. ....|.|.|++||. |..|+..
T Consensus 16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~~ 49 (58)
T 3ltf_D 16 CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEYK 49 (58)
T ss_dssp SCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCEE
T ss_pred CCCCCEEeCCccCCCCCEEeECCCCCc----cCCCccc
Confidence 877 79983 44579999999999 9999743
No 110
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=95.55 E-value=0.003 Score=36.29 Aligned_cols=26 Identities=27% Similarity=0.764 Sum_probs=19.5
Q ss_pred CCceEec----CCCCeEeecCCCcEeCCCCCcee
Q psy11800 131 ANGMCIN----MDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 131 ~~~~C~~----~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
++|+|+. ..+.|+|.|++|| .|..|+
T Consensus 18 NGGtC~~~~~~~~~~y~C~C~~Gf----~G~~Ce 47 (52)
T 3ca7_A 18 NDAHCFAVKIADLPVYSCECAIGF----MGQRCE 47 (52)
T ss_dssp TTCEEEEEEETTEEEEEEECCTTE----ESTTSC
T ss_pred CCCEEecCccCCCCCEEEECCCCC----cCCCCc
Confidence 3468886 3457999999999 677773
No 111
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.51 E-value=0.0085 Score=48.52 Aligned_cols=42 Identities=33% Similarity=0.980 Sum_probs=26.8
Q ss_pred cccCCCCCCCCceEecCCCCeEeecCCCcEeCCCCCceeecCc
Q psy11800 122 DECSQNGMCANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 122 ~~C~~~~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~ 164 (220)
|+|.....|.+ .|++.+++|+|.|.+||.+.+++..|..+++
T Consensus 2 ~ec~~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~ 43 (349)
T 3v64_C 2 NECAEEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP 43 (349)
T ss_dssp -------CCSS-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred cccCCCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence 56653345655 8999999999999999999888999976543
No 112
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.45 E-value=0.013 Score=41.70 Aligned_cols=50 Identities=22% Similarity=0.445 Sum_probs=37.9
Q ss_pred cccccccccccccccCCC--CCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 110 KKKKKKKKKLYHDECSQN--GMCANGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 110 ~~~~~~~~~~~~~~C~~~--~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
.||.......++++|... ..|. ..|.+..++|+|.|.+||.+..+++.|.
T Consensus 106 ~GF~~~y~~~d~~eC~~~~~~~C~-~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 106 TGFAAYYVATDINECTDFVDVPCS-HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CEEEEEEEEEECCTTTC-CCCCSS-SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccceeeeecccCcccCCCCCCCCC-CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 466666666677888753 3454 4799999999999999999887788775
No 113
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.43 E-value=0.006 Score=47.99 Aligned_cols=47 Identities=32% Similarity=0.659 Sum_probs=38.0
Q ss_pred CCccCCC-CCCCCCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcccC
Q psy11800 52 VDECYEN-PLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT 99 (220)
Q Consensus 52 i~~C~~~-~~~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~ 99 (220)
.|||..+ ++.|.+ .|.++.++|+|.|..||.+..++..|...++|.-
T Consensus 2 ~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~C 49 (283)
T 3f1s_B 2 KNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 49 (283)
T ss_dssp -CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCT
T ss_pred CCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCcccccccccc
Confidence 5788876 667854 8999999999999999999888889987665543
No 114
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.99 E-value=0.014 Score=50.33 Aligned_cols=36 Identities=42% Similarity=0.963 Sum_probs=30.4
Q ss_pred CCccCCCCCCC-CCCeeee-CCCceEeeCC-CCCccCCCCCCccC
Q psy11800 52 VDECYENPLIC-LNGRCDN-TLGSYRCACQ-PGYSPSPDGGFCVD 93 (220)
Q Consensus 52 i~~C~~~~~~C-~~~~C~~-~~g~~~C~C~-~g~~~~~~~~~C~~ 93 (220)
+|+|.++| | ++|.|++ ..++|.|.|+ +||+ |..|+.
T Consensus 2 ~d~C~~~P--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYP--CQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CCGGGGCC--CCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCcCCCCC--CCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 57899888 9 5599999 8899999999 9999 566653
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.76 E-value=0.02 Score=40.97 Aligned_cols=34 Identities=29% Similarity=0.717 Sum_probs=26.7
Q ss_pred CC-CCeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCCC
Q psy11800 172 CL-NGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECRT 209 (220)
Q Consensus 172 C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~~ 209 (220)
|. ++.|.+...+|.|.|.+||. |..|+.+.+|..
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c~~ 161 (164)
T 3cfw_A 127 CSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVDPR 161 (164)
T ss_dssp SCSSEEEEEETTEEEEEECTTCB----SSSSCBC-----
T ss_pred CCCCCeecccCCCceeeeCCCcc----cccccccccCcc
Confidence 77 48999999999999999999 899999888854
No 116
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.66 E-value=0.028 Score=44.88 Aligned_cols=42 Identities=26% Similarity=0.477 Sum_probs=33.0
Q ss_pred cCcCCCCCCCCCCCeEecCCC--CeEEeCCCCCccCCCCCCCCcC
Q psy11800 162 VDECYENPLICLNGRCDNTLG--SYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 162 i~~C~~~~~~C~~~~C~~~~~--~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
.++|......|.+ .|...++ +|.|.|+.||.+..+++.|.+-
T Consensus 267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 4677655555765 7998765 7999999999999999999764
No 117
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.65 E-value=0.024 Score=45.12 Aligned_cols=41 Identities=24% Similarity=0.434 Sum_probs=32.7
Q ss_pred ecCcCCCC---CCCCCCCeEecCC------CCeEEeCCCCCccCCCCCCCC
Q psy11800 161 DVDECYEN---PLICLNGRCDNTL------GSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 161 ~i~~C~~~---~~~C~~~~C~~~~------~~~~C~C~~G~~~~~~g~~C~ 202 (220)
..++|... .+.|.+ .|.+.+ ++|.|.|+.||.+..+++.|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 45788765 445865 899875 589999999999999999885
No 118
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=94.52 E-value=0.025 Score=32.03 Aligned_cols=30 Identities=33% Similarity=0.855 Sum_probs=23.8
Q ss_pred CCCCCeEe--cCCCCeEEeCCCCCccCCCCCCCCcC
Q psy11800 171 ICLNGRCD--NTLGSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 171 ~C~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
.|.||+|. ...+.+.|+|++||. |..|+..
T Consensus 15 yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~ 46 (50)
T 1iox_A 15 YCIKGRCRFVVAEQTPSCVCDEGYI----GARCERV 46 (50)
T ss_dssp SCTTCCEEEETTTTEEEECCCTTEE----TTTTCEE
T ss_pred cccCCEEEeEcCCCCeEEECCCCcc----cCCCCee
Confidence 47778886 455678999999999 9999743
No 119
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.33 E-value=0.029 Score=48.65 Aligned_cols=36 Identities=33% Similarity=1.000 Sum_probs=29.1
Q ss_pred CCccCCCCCCC-CCCeeee-CCCceEeeCC-CCCccCCCCCCccC
Q psy11800 52 VDECYENPLIC-LNGRCDN-TLGSYRCACQ-PGYSPSPDGGFCVD 93 (220)
Q Consensus 52 i~~C~~~~~~C-~~~~C~~-~~g~~~C~C~-~g~~~~~~~~~C~~ 93 (220)
+++|.++| | ++|+|++ ..++|.|.|+ +||+ |..|+.
T Consensus 1 vd~C~s~P--C~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNP--CQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTTTCC--CCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCCC--CCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 57899888 9 5589996 4589999999 9998 566653
No 120
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.29 E-value=0.024 Score=49.72 Aligned_cols=43 Identities=26% Similarity=0.558 Sum_probs=36.1
Q ss_pred ecCcCCCCCCCCCCCeEecCC-CCeEEeCCCCCccCCCCCCCCcC
Q psy11800 161 DVDECYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVDR 204 (220)
Q Consensus 161 ~i~~C~~~~~~C~~~~C~~~~-~~~~C~C~~G~~~~~~g~~C~~~ 204 (220)
.+++|....+.|.+ .|.+.+ ++|.|.|+.||.+.++++.|...
T Consensus 264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 46888866556865 899988 89999999999999999999654
No 121
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.26 E-value=0.042 Score=37.50 Aligned_cols=41 Identities=32% Similarity=0.826 Sum_probs=29.7
Q ss_pred CCC-CeEecCC--CCe-EEeCCCCCccCCCCCCCC-cCC-CCCCCCC-CceE
Q psy11800 172 CLN-GRCDNTL--GSY-RCACQPGYSPSPDGGFCV-DRD-ECRTPGG-KYTA 216 (220)
Q Consensus 172 C~~-~~C~~~~--~~~-~C~C~~G~~~~~~g~~C~-~~~-~C~~~~~-~~~~ 216 (220)
|.| ++|++.. ..| .|.|++||. |.+|+ +++ +|....| .|.+
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~~~C~~g~G~~YrG 50 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRG 50 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEE----STTSCEESSCCSBCSSCTTCCS
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCC----CccccccCcCCCccccccccee
Confidence 777 7998874 455 999999999 89997 343 6875533 3554
No 122
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.12 E-value=0.15 Score=33.40 Aligned_cols=61 Identities=28% Similarity=0.581 Sum_probs=43.9
Q ss_pred C-CCCeeee-CCCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC-CCC-CCceEec
Q psy11800 62 C-LNGRCDN-TLGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMC-ANGMCIN 137 (220)
Q Consensus 62 C-~~~~C~~-~~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c-~~~~C~~ 137 (220)
| .++.|.. ..+.-+|.|..||.. ++..|..++. .|..+ ..| .++.|..
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np--------------------------~C~~nNGGCd~nAeC~~ 69 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKE--VGGKCVPASI--------------------------TCEENNGGCAPEAECTM 69 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEE--CSSSEEECCC--------------------------CTTSGGGGSCTTSEEEE
T ss_pred CCCCCCeEECCCCCEeEEEECCeec--cCCEEEECCc--------------------------chhhcCCCcCCCcEeEE
Confidence 5 6789988 568899999999997 4677776543 03222 233 4678887
Q ss_pred CC-CCeEeecCCCc
Q psy11800 138 MD-GSFKCQCKPGF 150 (220)
Q Consensus 138 ~~-~~~~C~C~~G~ 150 (220)
.. ....|.|..+|
T Consensus 70 ~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 70 DDKKEVECKCTKEG 83 (105)
T ss_dssp CTTSCEEEECCSTT
T ss_pred CCCCEEEeECCCCC
Confidence 74 67899999997
No 123
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.77 E-value=0.065 Score=30.29 Aligned_cols=37 Identities=30% Similarity=0.784 Sum_probs=26.4
Q ss_pred cCcCCCC-CCCCCCCeEe--cCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 162 VDECYEN-PLICLNGRCD--NTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 162 i~~C~~~-~~~C~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
.++|... ...|.||+|. ...+.+.|+|+.||. |..|+
T Consensus 9 ~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 9 KNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp CCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence 3455431 2348888997 455678999999999 88886
No 124
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.75 E-value=0.031 Score=34.83 Aligned_cols=38 Identities=34% Similarity=0.879 Sum_probs=26.0
Q ss_pred cCcCCC-CCCCCCCCeEec--CCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 162 VDECYE-NPLICLNGRCDN--TLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 162 i~~C~~-~~~~C~~~~C~~--~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
.++|.. ....|.||.|+. ..+.+.|.|.+||. |..|+.
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE~ 77 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCHG 77 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----cccccc
Confidence 355652 123588888953 34678999999999 888863
No 125
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=93.71 E-value=0.076 Score=34.52 Aligned_cols=62 Identities=29% Similarity=0.709 Sum_probs=42.4
Q ss_pred C-CCCeeeeC-CCceEeeCCCCCccCCCCCCccCCCcccCCCCCCccccccccccccccccccccCCC-CCC-CCceEec
Q psy11800 62 C-LNGRCDNT-LGSYRCACQPGYSPSPDGGFCVDRDECRTPGDHDECSQKKKKKKKKKKLYHDECSQN-GMC-ANGMCIN 137 (220)
Q Consensus 62 C-~~~~C~~~-~g~~~C~C~~g~~~~~~~~~C~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~C~~~-~~c-~~~~C~~ 137 (220)
| .++.|... .+..+|+|.+||.+ ++..|..+.. +.|... ..| .++.|..
T Consensus 12 C~~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~-------------------------~sC~~nNGGCd~nA~C~~ 64 (99)
T 1ob1_C 12 CPQNSGCFRHLDEREECKCLLNYKQ--EGDKCVENPN-------------------------PTCNENNGGCDADAKCTE 64 (99)
T ss_dssp CCTTEEEECCTTSCCEEEECTTEEE--ETTEEEECSC-------------------------CCSTTGGGGCCTTEEEEC
T ss_pred CCCCCCeEEcCCCCEEEEecCCeec--CCCeEeeCCC-------------------------CChhhcCCCcCCCceeEe
Confidence 5 56889874 58899999999997 4566665410 234332 333 4678877
Q ss_pred CC-----CCeEeecCCCc
Q psy11800 138 MD-----GSFKCQCKPGF 150 (220)
Q Consensus 138 ~~-----~~~~C~C~~G~ 150 (220)
.. +...|.|.+||
T Consensus 65 ~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 65 EDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CSCSSSSCCCEEEECSTT
T ss_pred cCCcccCCceEeEeCCCC
Confidence 64 56899999997
No 126
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=93.15 E-value=0.048 Score=39.15 Aligned_cols=22 Identities=9% Similarity=-0.126 Sum_probs=16.0
Q ss_pred CCc-ccCCCCCCCCCCCCccccc
Q psy11800 19 GPA-VVHSTYTGLSETQTYTGLS 40 (220)
Q Consensus 19 ~~~-~~~~~~~~~~~~~~~~~~~ 40 (220)
+.| .|.++|+|..|.++-.++.
T Consensus 18 ~~C~~C~~g~~G~~Ce~C~~g~~ 40 (162)
T 1klo_A 18 VVCTHCPTGTAGKRCELCDDGYF 40 (162)
T ss_dssp EEECSCCTTEESTTSCEECTTEE
T ss_pred EEeCCCCCCCcCCCCcCCCCCCc
Confidence 356 5788888888887766665
No 127
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.62 E-value=0.048 Score=47.72 Aligned_cols=41 Identities=27% Similarity=0.498 Sum_probs=32.4
Q ss_pred cCcCCCCCCCCCCCeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 162 VDECYENPLICLNGRCDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 162 i~~C~~~~~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
.++|....+.|.+ .|.+.+++|.|.|+.||.+..+++.|..
T Consensus 578 ~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 578 SNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred cccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 3556554445654 8999999999999999999999988853
No 128
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=92.54 E-value=0.18 Score=34.33 Aligned_cols=53 Identities=17% Similarity=0.415 Sum_probs=34.9
Q ss_pred C-CCCeeeeCC--Cce-EeeCCCCCccCCCCCCccCC--CcccCC-CCCCcccccccccccccc
Q psy11800 62 C-LNGRCDNTL--GSY-RCACQPGYSPSPDGGFCVDR--DECRTP-GDHDECSQKKKKKKKKKK 118 (220)
Q Consensus 62 C-~~~~C~~~~--g~~-~C~C~~g~~~~~~~~~C~~~--~~C~~~-~~~~~C~c~~~~~~~~~~ 118 (220)
| ++++|++.. ..| .|.|++||+ +..|+.. .+|... +..+.+.+..++.|..|.
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~~~~~~C~~g~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEE----STTSCEESSCCSBCSSCTTCCSCCCBBTTSCBBC
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCC----CccccccCcCCCcccccccceeeccccccCCccc
Confidence 7 458999874 455 999999998 5666532 245433 345666666666665554
No 129
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=92.21 E-value=0.12 Score=29.17 Aligned_cols=30 Identities=27% Similarity=0.812 Sum_probs=23.0
Q ss_pred CCCCCceEecC--CCCeEeecCCCcEeCCCCCceee
Q psy11800 128 GMCANGMCINM--DGSFKCQCKPGFVLSPTGHACID 161 (220)
Q Consensus 128 ~~c~~~~C~~~--~~~~~C~C~~G~~~~~~g~~C~~ 161 (220)
..|.||+|+.. .+.+.|.|.+|| .|..|..
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGY----VGARCEH 45 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCC----cccCCCc
Confidence 55677889754 366899999999 7888753
No 130
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=91.98 E-value=0.93 Score=28.89 Aligned_cols=61 Identities=21% Similarity=0.446 Sum_probs=47.4
Q ss_pred CCceEecC-CCCeEeecCCCcEeCCCCCceeecC--cCCCCCCCCC-CCeEecCC-CCeEEeCCCCCc
Q psy11800 131 ANGMCINM-DGSFKCQCKPGFVLSPTGHACIDVD--ECYENPLICL-NGRCDNTL-GSYRCACQPGYS 193 (220)
Q Consensus 131 ~~~~C~~~-~~~~~C~C~~G~~~~~~g~~C~~i~--~C~~~~~~C~-~~~C~~~~-~~~~C~C~~G~~ 193 (220)
.++.|+.. .+.-.|+|..+|.. .+..|+.-+ .|..+.+.|. ++.|.... ..-.|.|...+.
T Consensus 14 ~NA~Cyr~~dg~EecRCllnykk--~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 14 ENAACYRYLDGTEEWRCLLYFKE--DAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp TTEEEEECTTSCEEEEECTTEEE--ETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred CCcCeEEEcCCCEEEEEECCeEe--cCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 36788875 46788999999977 577785443 7887777797 59998877 678999998765
No 131
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.92 E-value=0.16 Score=40.47 Aligned_cols=42 Identities=26% Similarity=0.477 Sum_probs=32.0
Q ss_pred CCccCCCCCCCCCCeeeeCCC--ceEeeCCCCCccCCCCCCccCC
Q psy11800 52 VDECYENPLICLNGRCDNTLG--SYRCACQPGYSPSPDGGFCVDR 94 (220)
Q Consensus 52 i~~C~~~~~~C~~~~C~~~~g--~~~C~C~~g~~~~~~~~~C~~~ 94 (220)
.++|..+.+.|.+ .|...++ +|.|.|+.||.+..+++.|.+.
T Consensus 267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 4667655555753 7887765 7999999999999899999875
No 132
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=91.89 E-value=0.074 Score=31.07 Aligned_cols=28 Identities=32% Similarity=0.800 Sum_probs=20.7
Q ss_pred C-CCCeeee----CCCceEeeCCCCCccCCCCCCccC
Q psy11800 62 C-LNGRCDN----TLGSYRCACQPGYSPSPDGGFCVD 93 (220)
Q Consensus 62 C-~~~~C~~----~~g~~~C~C~~g~~~~~~~~~C~~ 93 (220)
| +.|+|+. ..+.|.|.|++||. |..|+.
T Consensus 16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~ 48 (58)
T 3ltf_D 16 CLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY 48 (58)
T ss_dssp SCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCE
T ss_pred CCCCCEEeCCccCCCCCEEeECCCCCc----cCCCcc
Confidence 7 5589983 34579999999998 556653
No 133
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.59 E-value=0.12 Score=36.81 Aligned_cols=38 Identities=29% Similarity=0.686 Sum_probs=23.6
Q ss_pred ccCCCCCCC-CCCeeeeCCCceEeeCCCCCccCCCCCCccCCCcc
Q psy11800 54 ECYENPLIC-LNGRCDNTLGSYRCACQPGYSPSPDGGFCVDRDEC 97 (220)
Q Consensus 54 ~C~~~~~~C-~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~C 97 (220)
.|..++ | .++.|.+..++|.|.|.+||. +..|+...+|
T Consensus 121 ~~~~~~--C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c 159 (164)
T 3cfw_A 121 SCQPWS--CSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVD 159 (164)
T ss_dssp CCCTTS--SCSSEEEEEETTEEEEEECTTCB----SSSSCBC---
T ss_pred CCCCCc--CCCCCeecccCCCceeeeCCCcc----cccccccccC
Confidence 344433 6 457888877788888888887 4456655444
No 134
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.42 E-value=0.13 Score=45.09 Aligned_cols=42 Identities=26% Similarity=0.581 Sum_probs=34.5
Q ss_pred CCCccCCCCCCCCCCeeeeCC-CceEeeCCCCCccCCCCCCccC
Q psy11800 51 NVDECYENPLICLNGRCDNTL-GSYRCACQPGYSPSPDGGFCVD 93 (220)
Q Consensus 51 ~i~~C~~~~~~C~~~~C~~~~-g~~~C~C~~g~~~~~~~~~C~~ 93 (220)
.+++|..+.+.|.+ .|.+.+ ++|.|.|+.||.+..++++|..
T Consensus 264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 46788866566753 899988 8999999999999888888864
No 135
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.37 E-value=0.23 Score=28.00 Aligned_cols=29 Identities=24% Similarity=0.750 Sum_probs=22.2
Q ss_pred CCCCCceEe--cCCCCeEeecCCCcEeCCCCCcee
Q psy11800 128 GMCANGMCI--NMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 128 ~~c~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
..|.||+|+ ...+.+.|.|+.|| .|..|.
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy----~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEY----FGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSC----CSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCc----cccccc
Confidence 556778997 44567899999999 777763
No 136
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.16 E-value=0.16 Score=40.15 Aligned_cols=41 Identities=24% Similarity=0.437 Sum_probs=30.9
Q ss_pred CCCccCCC---CCCCCCCeeeeCC------CceEeeCCCCCccCCCCCCcc
Q psy11800 51 NVDECYEN---PLICLNGRCDNTL------GSYRCACQPGYSPSPDGGFCV 92 (220)
Q Consensus 51 ~i~~C~~~---~~~C~~~~C~~~~------g~~~C~C~~g~~~~~~~~~C~ 92 (220)
..++|..+ .+.|.+ .|.+.+ ++|.|.|+.||.+..++++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 35677755 445753 888775 579999999999988888874
No 137
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=90.94 E-value=0.082 Score=43.88 Aligned_cols=25 Identities=8% Similarity=-0.069 Sum_probs=14.9
Q ss_pred CcccCCCCCCCCCCCCccccccCCC
Q psy11800 20 PAVVHSTYTGLSETQTYTGLSDSLS 44 (220)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (220)
.|.|..++.|..|.+|..++.+.+|
T Consensus 314 ~C~C~~~ttG~~CE~C~pgy~~~P~ 338 (426)
T 3zyj_B 314 TCECEHNTTGPDCGKCKKNYQGRPW 338 (426)
T ss_dssp EECCCTTEESSSSCEECTTCCSSCC
T ss_pred eeeCCCCCcCCCccccccccccCcc
Confidence 4566666666666666666554444
No 138
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=90.68 E-value=0.13 Score=44.34 Aligned_cols=35 Identities=23% Similarity=0.777 Sum_probs=28.4
Q ss_pred cccCCCCCCCCceEec-CCCCeEeecC-CCcEeCCCCCcee
Q psy11800 122 DECSQNGMCANGMCIN-MDGSFKCQCK-PGFVLSPTGHACI 160 (220)
Q Consensus 122 ~~C~~~~~c~~~~C~~-~~~~~~C~C~-~G~~~~~~g~~C~ 160 (220)
|+|..+++.++|+|.+ ..++|+|.|. +|| .|.+|+
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce 39 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGY----SGPNCT 39 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSE----ETTTTC
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCc----CCCCCC
Confidence 6776666556689999 8889999999 999 777883
No 139
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.61 E-value=0.19 Score=28.30 Aligned_cols=29 Identities=28% Similarity=0.771 Sum_probs=22.1
Q ss_pred CCCCCceEe--cCCCCeEeecCCCcEeCCCCCcee
Q psy11800 128 GMCANGMCI--NMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 128 ~~c~~~~C~--~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
..|.||+|+ ...+.+.|.|++|| .|..|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy----~G~RCe 44 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGY----IGARCE 44 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTE----ETTTTC
T ss_pred CcccCCEEEeEcCCCCeEEECCCCc----ccCCCC
Confidence 556678885 44567899999999 788874
No 140
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=90.54 E-value=0.25 Score=40.96 Aligned_cols=94 Identities=20% Similarity=0.422 Sum_probs=22.4
Q ss_pred CeeeeCCCceEeeCCCCCccCCCCCCcc---CC---CcccC-------CCCCCccc-cccccccccccccccccCCCCCC
Q psy11800 65 GRCDNTLGSYRCACQPGYSPSPDGGFCV---DR---DECRT-------PGDHDECS-QKKKKKKKKKKLYHDECSQNGMC 130 (220)
Q Consensus 65 ~~C~~~~g~~~C~C~~g~~~~~~~~~C~---~~---~~C~~-------~~~~~~C~-c~~~~~~~~~~~~~~~C~~~~~c 130 (220)
..|....+.+.|.|+.++.+ ..|+ .. ..+.. ......|. |.-.+.+..|.....+| .
T Consensus 304 s~C~~~~g~~~C~C~~~ttG----~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C-----~ 374 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTG----PDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHC-----Q 374 (426)
T ss_dssp SCEEEETTEEEECCCTTEES----SSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC--------------------
T ss_pred hhcCCCCCCceeeCCCCCcC----CCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccC-----C
Confidence 57887777899999999884 3343 11 11111 11223342 22233344454433333 1
Q ss_pred CCceEecCCCCeEeecCCCcEeCCCCCceeecCcCCCCCCCCCC-CeEecCCC
Q psy11800 131 ANGMCINMDGSFKCQCKPGFVLSPTGHACIDVDECYENPLICLN-GRCDNTLG 182 (220)
Q Consensus 131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~~i~~C~~~~~~C~~-~~C~~~~~ 182 (220)
++++|.+.. +|.|++|| .|..|.. | .|.+ |.|....|
T Consensus 375 ngg~C~~~~---~C~C~~G~----~G~~Ce~---c-----~C~~~g~C~~~~G 412 (426)
T 3zyj_B 375 NGGTCHNNV---RCLCPAAY----TGILCEK---L-----RCEEAGSCGSDSG 412 (426)
T ss_dssp -----------------------------------------------------
T ss_pred CCCCcCCCC---CCcCCCCC----cCCCCcC---C-----CCCCCCcccCCCC
Confidence 235777654 89999999 6666632 1 2554 56665444
No 141
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.19 E-value=0.094 Score=36.98 Aligned_cols=34 Identities=38% Similarity=1.029 Sum_probs=27.8
Q ss_pred CcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 163 DECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
++|...+ |.+ +.|.+....|.|.|.+||. |.+|+
T Consensus 120 ~~~~~~p--c~~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 120 AACTNTS--CSGHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp CCCCTTG--GGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred CCCCCCC--CCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 4455444 764 8999999999999999999 88886
No 142
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.97 E-value=0.41 Score=41.86 Aligned_cols=41 Identities=27% Similarity=0.510 Sum_probs=32.5
Q ss_pred cCcCCCCCCCCCCCeEecCC--CCeEEeCCCCCccCCCCCCCCc
Q psy11800 162 VDECYENPLICLNGRCDNTL--GSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 162 i~~C~~~~~~C~~~~C~~~~--~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
.++|......|.+ .|...+ .+|.|.|+.||.+..+++.|.+
T Consensus 272 ~n~C~~~ng~Cs~-lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 272 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCTTTTTGGGCSS-EEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred cccccCCCCcccc-eEECCCCCCCceEeCCchheecccCcccCC
Confidence 4667665556765 898876 4799999999999999999975
No 143
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.40 E-value=0.21 Score=31.04 Aligned_cols=23 Identities=39% Similarity=1.122 Sum_probs=16.9
Q ss_pred CCCCeeeeC--CCceEeeCCCCCcc
Q psy11800 62 CLNGRCDNT--LGSYRCACQPGYSP 84 (220)
Q Consensus 62 C~~~~C~~~--~g~~~C~C~~g~~~ 84 (220)
|.||.|+-. .+.+.|.|.+||++
T Consensus 48 ClnG~C~~i~~~~~~~C~C~~GYtG 72 (79)
T 1xdt_R 48 CIHGECKYVKELRAPSCICHPGYHG 72 (79)
T ss_dssp CSSEEECCBGGGTBCCEEECTTEES
T ss_pred CCCCEeeeecCCCCeEEEcCCCccc
Confidence 866789533 35688999999983
No 144
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=88.05 E-value=0.42 Score=39.40 Aligned_cols=36 Identities=33% Similarity=0.877 Sum_probs=30.4
Q ss_pred cCcCCCCCCCCCC-CeEecCCCCeEEeCCC-CCccCCCCCCCCc
Q psy11800 162 VDECYENPLICLN-GRCDNTLGSYRCACQP-GYSPSPDGGFCVD 203 (220)
Q Consensus 162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~-G~~~~~~g~~C~~ 203 (220)
.+.|...+ |.| +.|++...+|.|.|+. +|. |..|+.
T Consensus 185 ~~~C~~~p--C~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 185 STTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp SSCCCTTS--SSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCccccc--CCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 46787766 987 8999999999999996 998 888864
No 145
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=87.95 E-value=0.26 Score=42.70 Aligned_cols=35 Identities=31% Similarity=0.818 Sum_probs=26.5
Q ss_pred cccCCCCCCCCceEec-CCCCeEeecC-CCcEeCCCCCcee
Q psy11800 122 DECSQNGMCANGMCIN-MDGSFKCQCK-PGFVLSPTGHACI 160 (220)
Q Consensus 122 ~~C~~~~~c~~~~C~~-~~~~~~C~C~-~G~~~~~~g~~C~ 160 (220)
++|..+++.++|+|++ ..+.|.|.|+ +|| .|.+|+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~----~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGF----YGENCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSE----ETTTTC
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCc----cCCCCC
Confidence 5676555555689995 4478999999 999 777773
No 146
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.29 E-value=0.31 Score=34.19 Aligned_cols=20 Identities=45% Similarity=1.280 Sum_probs=11.7
Q ss_pred CCeeeeCCCceEeeCCCCCc
Q psy11800 64 NGRCDNTLGSYRCACQPGYS 83 (220)
Q Consensus 64 ~~~C~~~~g~~~C~C~~g~~ 83 (220)
++.|.+....|.|.|.+||.
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~ 149 (157)
T 1g1t_A 130 HGECVETINNYTCKCDPGFS 149 (157)
T ss_dssp SEEEEEETTEEEEEECTTEE
T ss_pred CCEeecCCCCeeEECCCCcc
Confidence 35565555556666666655
No 147
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=84.60 E-value=0.87 Score=31.86 Aligned_cols=41 Identities=32% Similarity=0.891 Sum_probs=28.9
Q ss_pred CCC-CeEecC--CCCe-EEeCCCCCccCCCCCCCC-cCC-CCCCCCCC-ceE
Q psy11800 172 CLN-GRCDNT--LGSY-RCACQPGYSPSPDGGFCV-DRD-ECRTPGGK-YTA 216 (220)
Q Consensus 172 C~~-~~C~~~--~~~~-~C~C~~G~~~~~~g~~C~-~~~-~C~~~~~~-~~~ 216 (220)
|.| ++|+.. ...| .|.|++||. |++|+ +++ +|....|. |.|
T Consensus 15 C~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Cei~~~~~C~~g~G~~YrG 62 (145)
T 2i9a_A 15 CLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEIDKSKTCYEGNGHFYRG 62 (145)
T ss_dssp CCTTCEEEECSSSTTCEEEECCTTEE----STTSCEESSCCEECTTCTTCCS
T ss_pred CCCCCCcCCCccccCCccccCCCCCC----CCceeccccccCCCCCcccccc
Confidence 887 799775 2455 899999999 99996 333 57765432 444
No 148
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.29 E-value=1 Score=37.09 Aligned_cols=39 Identities=28% Similarity=0.717 Sum_probs=30.4
Q ss_pred CC-CCCccCCCCCCC-CCCeeeeCCCceEeeCCC-CCccCCCCCCccC
Q psy11800 49 DL-NVDECYENPLIC-LNGRCDNTLGSYRCACQP-GYSPSPDGGFCVD 93 (220)
Q Consensus 49 C~-~i~~C~~~~~~C-~~~~C~~~~g~~~C~C~~-g~~~~~~~~~C~~ 93 (220)
|. ..+.|..+| | +++.|++....|.|.|+. +|. +..|+.
T Consensus 181 C~~~~~~C~~~p--C~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 181 CEGPSTTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp CCCCSSCCCTTS--SSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCCCCCccccc--CCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 53 357788877 9 669999999999999996 887 556653
No 149
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=80.00 E-value=1.5 Score=32.05 Aligned_cols=25 Identities=36% Similarity=0.998 Sum_probs=20.4
Q ss_pred CCC-CeEecCCCCeEEeCCCCCccCCCCCCCCc
Q psy11800 172 CLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVD 203 (220)
Q Consensus 172 C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~ 203 (220)
|.| |.|+. ...|.|++||. |..|+.
T Consensus 155 C~ngG~Cv~---P~~C~C~~Gw~----G~~C~~ 180 (188)
T 2ygo_A 155 CRNGGFCNE---RRICECPDGFH----GPHCEG 180 (188)
T ss_dssp CCTTCEECT---TSCEECCTTCB----TTTTCB
T ss_pred CCCCCEeCC---CCcccCcCCCC----CCCCcC
Confidence 877 78974 34799999999 999974
No 150
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=75.93 E-value=2 Score=40.70 Aligned_cols=35 Identities=34% Similarity=0.936 Sum_probs=29.4
Q ss_pred CcCCCCCCCCCC-CeEecCCCCeEEeCC-CCCccCCCCCCCCc
Q psy11800 163 DECYENPLICLN-GRCDNTLGSYRCACQ-PGYSPSPDGGFCVD 203 (220)
Q Consensus 163 ~~C~~~~~~C~~-~~C~~~~~~~~C~C~-~G~~~~~~g~~C~~ 203 (220)
+.|...+ |.| |.|.....+|.|.|+ .||. |..|+.
T Consensus 1018 ~~C~~~p--C~ngG~C~~~~~~~~C~C~~~g~~----G~~C~~ 1054 (1245)
T 3qcw_A 1018 TTCQEDS--CSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 1054 (1245)
T ss_dssp CCCCTTS--SSSSCEEEEETTEEEEECTTSSCB----STTSCB
T ss_pred CceECCc--CCCCCEeCCCCCCCEEECCCCCCC----CCCccC
Confidence 5676666 987 899999999999999 5999 999963
No 151
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=73.24 E-value=12 Score=25.92 Aligned_cols=33 Identities=36% Similarity=0.907 Sum_probs=22.1
Q ss_pred CCceEecC--CCCe-EeecCCCcEeCCCCCce-eecC-cCCC
Q psy11800 131 ANGMCINM--DGSF-KCQCKPGFVLSPTGHAC-IDVD-ECYE 167 (220)
Q Consensus 131 ~~~~C~~~--~~~~-~C~C~~G~~~~~~g~~C-~~i~-~C~~ 167 (220)
++|+|+.. ...+ +|.|++|| .|..| ++++ +|..
T Consensus 17 NGGtC~~~~~~s~~~~C~Cp~g~----~G~~Cei~~~~~C~~ 54 (145)
T 2i9a_A 17 NGGTCVSNKYFSNIHWCNCPKKF----GGQHCEIDKSKTCYE 54 (145)
T ss_dssp TTCEEEECSSSTTCEEEECCTTE----ESTTSCEESSCCEEC
T ss_pred CCCCcCCCccccCCccccCCCCC----CCCceeccccccCCC
Confidence 34789765 2444 89999999 77888 3433 4543
No 152
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=72.02 E-value=2.8 Score=39.77 Aligned_cols=36 Identities=39% Similarity=0.983 Sum_probs=30.5
Q ss_pred cCcCCCCCCCCCC-CeEecCCCCeEEeCC-CCCccCCCCCCCCc
Q psy11800 162 VDECYENPLICLN-GRCDNTLGSYRCACQ-PGYSPSPDGGFCVD 203 (220)
Q Consensus 162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~-~G~~~~~~g~~C~~ 203 (220)
.+.|.+.+ |.| +.|.+....|.|.|+ .||. |..|+.
T Consensus 619 ~~~C~~~p--C~ngg~C~~~~~~~~C~C~~~g~~----G~~C~~ 656 (1245)
T 3qcw_A 619 AKPCLSNP--CKNNGMCRDGWNRYVCDCSGTGYL----GRSCER 656 (1245)
T ss_dssp SCGGGSCC--CCTTCEEEECSSSEEEECTTTTEE----STTSCE
T ss_pred CCCCCccC--CCCCCEEeCCCCCeEEECCCCCcc----cccCcc
Confidence 46787776 987 899999999999999 7998 888964
No 153
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=71.03 E-value=5.6 Score=32.39 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=22.5
Q ss_pred CcccCCCCCCCCCCCCccccccCCCCCCCCCCCCccC
Q psy11800 20 PAVVHSTYTGLSETQTYTGLSDSLSLGVSDLNVDECY 56 (220)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~C~~i~~C~ 56 (220)
-|.|.++|.|..|.++-.++-+.++....+.+...|.
T Consensus 273 ~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~ 309 (375)
T 4aqt_A 273 MCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECL 309 (375)
T ss_dssp EECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCC
T ss_pred eeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCC
Confidence 3567777777777777766665555544444444444
No 154
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=67.23 E-value=4.6 Score=31.04 Aligned_cols=41 Identities=44% Similarity=0.904 Sum_probs=29.8
Q ss_pred ecCcCCCCC---CCCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 161 DVDECYENP---LICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 161 ~i~~C~~~~---~~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
++++|.... ..|.+ .|.+..+++.|.|.+||.+..+...|.
T Consensus 120 ~~~~C~~~~~~~~~c~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 120 DVDECKEREDEELSCDH-YCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp ECCTTTC-----CCCSS-EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccccCCCCCCCcccCCc-CcCCccCCcEEEeCCcceeccCCCCCc
Confidence 456665332 13654 699999999999999999887777775
No 155
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=63.59 E-value=4.2 Score=31.55 Aligned_cols=41 Identities=37% Similarity=0.755 Sum_probs=28.9
Q ss_pred ecCcCCCCCC---CCCCCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 161 DVDECYENPL---ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 161 ~i~~C~~~~~---~C~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
+.++|...+. .|.+ .|.+..++|.|.|.+||.+..++..|.
T Consensus 119 ~~~~C~~~~~~~~~c~~-~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDH-YCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp ECCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCccCCCCCCcccCCC-ccccccCceEeecCCCceeccCCCCcc
Confidence 4456653221 2654 799999999999999999887777664
No 156
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=57.02 E-value=9.5 Score=32.57 Aligned_cols=38 Identities=29% Similarity=0.676 Sum_probs=26.1
Q ss_pred cCcCCCC-CCCCC-CCeEecC-CCCeEEeCCCCCccCCCCCCC
Q psy11800 162 VDECYEN-PLICL-NGRCDNT-LGSYRCACQPGYSPSPDGGFC 201 (220)
Q Consensus 162 i~~C~~~-~~~C~-~~~C~~~-~~~~~C~C~~G~~~~~~g~~C 201 (220)
++.|..+ ++.|+ ++.|+.. .+.|.|.|+.||.. +|..|
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag--~G~~c 58 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAG--NGILC 58 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEES--SSSSC
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCC--CCccc
Confidence 3446443 24587 5899886 45789999999983 45556
No 157
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=50.48 E-value=11 Score=29.08 Aligned_cols=50 Identities=24% Similarity=0.552 Sum_probs=31.6
Q ss_pred cccccccccccccccCCC----CCCCCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 110 KKKKKKKKKLYHDECSQN----GMCANGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 110 ~~~~~~~~~~~~~~C~~~----~~c~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
.||.......+.++|... ..|.+ .|.+..+.+.|.|.+||.+..+...|.
T Consensus 109 ~GF~a~y~~~~~~~C~~~~~~~~~c~~-~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 109 TGFEAFYAAEDVDECRTSLGDSVPCDH-YCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CEEEEEEEEEECCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred ccEEEEEEeccCCccCCCCCCcccCCC-ccccccCceEeecCCCceeccCCCCcc
Confidence 344433333344555422 22433 688889999999999999987776663
No 158
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=46.80 E-value=12 Score=27.23 Aligned_cols=23 Identities=35% Similarity=0.927 Sum_probs=17.5
Q ss_pred CCceEecCCCCeEeecCCCcEeCCCCCcee
Q psy11800 131 ANGMCINMDGSFKCQCKPGFVLSPTGHACI 160 (220)
Q Consensus 131 ~~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 160 (220)
++|.|+... +|+|+.|| .|..|.
T Consensus 157 ngG~Cv~P~---~C~C~~Gw----~G~~C~ 179 (188)
T 2ygo_A 157 NGGFCNERR---ICECPDGF----HGPHCE 179 (188)
T ss_dssp TTCEECTTS---CEECCTTC----BTTTTC
T ss_pred CCCEeCCCC---cccCcCCC----CCCCCc
Confidence 457897643 89999999 777773
No 159
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=42.28 E-value=41 Score=27.60 Aligned_cols=26 Identities=12% Similarity=0.059 Sum_probs=19.0
Q ss_pred CcccCCCCCCCCCCCCccccccCCCC
Q psy11800 20 PAVVHSTYTGLSETQTYTGLSDSLSL 45 (220)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (220)
.|.|...+.|..|.+|-.++-+.+|.
T Consensus 287 ~C~C~hnT~G~~CErC~pGy~g~p~~ 312 (403)
T 2y38_A 287 QCACQHNTCGGSCDRCCPGFNQQPWK 312 (403)
T ss_dssp EECCCTTEESSSCCEECTTCCSSCCC
T ss_pred EeECcCcCcCCCCCCCCccccCCccc
Confidence 36777788888888887777766554
No 160
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=40.50 E-value=2.9 Score=34.08 Aligned_cols=14 Identities=29% Similarity=0.869 Sum_probs=8.3
Q ss_pred EE-eCCCCCccCCCCCCCC
Q psy11800 185 RC-ACQPGYSPSPDGGFCV 202 (220)
Q Consensus 185 ~C-~C~~G~~~~~~g~~C~ 202 (220)
.| .|.++|. |..|+
T Consensus 335 ~C~~C~~n~~----G~~Ce 349 (375)
T 4aqt_A 335 HCTNCRDNTD----GAKCE 349 (375)
T ss_dssp EECSCTTTEE----STTSC
T ss_pred CCCCCCCCCc----CCCCC
Confidence 45 3666666 66663
No 161
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=40.25 E-value=20 Score=17.79 Aligned_cols=22 Identities=32% Similarity=0.978 Sum_probs=15.6
Q ss_pred EeecCCCcEeCCCCCceeecCcC
Q psy11800 143 KCQCKPGFVLSPTGHACIDVDEC 165 (220)
Q Consensus 143 ~C~C~~G~~~~~~g~~C~~i~~C 165 (220)
-|.|.+||..+.. ..|...++|
T Consensus 6 GC~C~~G~vrn~~-G~CV~~~~C 27 (32)
T 3ssb_I 6 KCYCEDGYARDVN-GKCIPIKDC 27 (32)
T ss_dssp EEEECTTEEECTT-SCEEEGGGC
T ss_pred CCCcCCCcEECCC-CCEECHHHC
Confidence 4889999987643 357766666
No 162
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=37.12 E-value=13 Score=31.73 Aligned_cols=58 Identities=17% Similarity=0.368 Sum_probs=32.3
Q ss_pred CCCcccCCCCC--CCCCCCCccccccCCCCCCCCCCCCccCCCCCCCCCCeeeeCCCceEeeCCCCCccC
Q psy11800 18 AGPAVVHSTYT--GLSETQTYTGLSDSLSLGVSDLNVDECYENPLICLNGRCDNTLGSYRCACQPGYSPS 85 (220)
Q Consensus 18 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~C~~i~~C~~~~~~C~~~~C~~~~g~~~C~C~~g~~~~ 85 (220)
.|.|.|.++|. +..|..|..|+-+..-. ...|.. |....=....|++.|.|..+|...
T Consensus 262 ~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~------~~~C~~----CP~~S~s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 262 IGQCLCQAGYEKVEDACQACSPGFFKFEAS------ESPCLE----CPEHTLPSPEGATSCECEEGFFRA 321 (536)
T ss_dssp BCCCEECTTEEEETTEEEECCTTEECCSCC------SSCCEE----CCSSEECCCTTCSSCEECTTCBCC
T ss_pred cCcEeccCccccCCceeeecCCCCCcccCC------CCcccc----CCCCCCCCCCCccEEEEecccccc
Confidence 48999999997 34444444443321111 123432 522122334588999999999753
No 163
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=35.52 E-value=32 Score=29.41 Aligned_cols=24 Identities=29% Similarity=0.678 Sum_probs=20.2
Q ss_pred CC-CCCeeeeCC-CceEeeCCCCCcc
Q psy11800 61 IC-LNGRCDNTL-GSYRCACQPGYSP 84 (220)
Q Consensus 61 ~C-~~~~C~~~~-g~~~C~C~~g~~~ 84 (220)
.| .++.|+... +.|.|.|+.||.+
T Consensus 28 ~c~~~a~C~~~~~~~~~c~C~~G~ag 53 (551)
T 3fby_A 28 ECHEHADCVLERDGSRSCVCAVGWAG 53 (551)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEES
T ss_pred CCCCCCeeEeCCCCCEecCCCCCCCC
Confidence 48 778999874 6789999999986
No 164
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=35.15 E-value=11 Score=23.01 Aligned_cols=27 Identities=30% Similarity=0.717 Sum_probs=20.1
Q ss_pred EEeCCCCCccCCCCCCCCcCCCCCCCC
Q psy11800 185 RCACQPGYSPSPDGGFCVDRDECRTPG 211 (220)
Q Consensus 185 ~C~C~~G~~~~~~g~~C~~~~~C~~~~ 211 (220)
-|.|.+||.++.+...|...++|-...
T Consensus 48 GC~C~~G~vr~~~~g~CV~~~~Cp~~~ 74 (78)
T 2p3f_N 48 ACVCKDGFYRDTVIGDCVREEECDQHE 74 (78)
T ss_dssp EEEECSSCEEETTTTEEECGGGCCCCC
T ss_pred CcCcCCCEeEcCCCCceECHHHCCCCC
Confidence 499999999865535688888886543
No 165
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=34.42 E-value=23 Score=27.05 Aligned_cols=31 Identities=35% Similarity=0.811 Sum_probs=25.1
Q ss_pred CCCCCeeeeCCCceEeeCCCCCccCCCCCCcc
Q psy11800 61 ICLNGRCDNTLGSYRCACQPGYSPSPDGGFCV 92 (220)
Q Consensus 61 ~C~~~~C~~~~g~~~C~C~~g~~~~~~~~~C~ 92 (220)
.|. ..|.+..+++.|.|.+||.+..+...|.
T Consensus 133 ~c~-~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 133 SCD-HYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCS-SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cCC-cCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 364 3699999999999999999877766665
No 166
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=31.73 E-value=12 Score=33.14 Aligned_cols=43 Identities=23% Similarity=0.649 Sum_probs=30.3
Q ss_pred ecCCCcEeCCCCCceeecCcCCCCCCCCC-CCeEecCCCCeEEeCCCCCccCCCCCCCC
Q psy11800 145 QCKPGFVLSPTGHACIDVDECYENPLICL-NGRCDNTLGSYRCACQPGYSPSPDGGFCV 202 (220)
Q Consensus 145 ~C~~G~~~~~~g~~C~~i~~C~~~~~~C~-~~~C~~~~~~~~C~C~~G~~~~~~g~~C~ 202 (220)
.|.+|| .+..|.-...|.. .|. +|.|++. .|.|.+||. |..|.
T Consensus 521 ~C~~gw----~g~dc~i~~~Cp~---~C~ghG~C~~G----~C~Cd~G~~----G~~C~ 564 (725)
T 2e26_A 521 DKQQTW----AIDNVYIGDGCLD---MCSGHGRCVQG----SCVCDEQWG----GLYCD 564 (725)
T ss_dssp CTTCCE----EEEEEEEESCSSG---GGGGSEEEETT----EEEECTTEE----STTSC
T ss_pred ccCCCc----ccccccccCCCCc---ccCCCcEECCC----CEeeCCCcc----CCCcC
Confidence 567788 5566642345632 476 5899874 599999999 78885
No 167
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=26.65 E-value=32 Score=19.20 Aligned_cols=21 Identities=33% Similarity=0.816 Sum_probs=13.7
Q ss_pred EeecCCCcEeCCCCCceeecCc
Q psy11800 143 KCQCKPGFVLSPTGHACIDVDE 164 (220)
Q Consensus 143 ~C~C~~G~~~~~~g~~C~~i~~ 164 (220)
-|.|++||.++.. ..|+.+.+
T Consensus 35 GC~C~~G~v~~~~-g~CV~~~~ 55 (56)
T 1ccv_A 35 GCQCQEGFLRNGE-GACVLPEN 55 (56)
T ss_dssp EEEECTTCEEETT-TEEECGGG
T ss_pred CCcCCCCeeECCC-CcccChhh
Confidence 4899999987532 45655443
No 168
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=21.22 E-value=87 Score=28.65 Aligned_cols=40 Identities=33% Similarity=0.588 Sum_probs=29.2
Q ss_pred cCcCCCCCCCCCC-CeEecCCCCeEEeCCCCCccCCCCCCCCcCCCCC
Q psy11800 162 VDECYENPLICLN-GRCDNTLGSYRCACQPGYSPSPDGGFCVDRDECR 208 (220)
Q Consensus 162 i~~C~~~~~~C~~-~~C~~~~~~~~C~C~~G~~~~~~g~~C~~~~~C~ 208 (220)
.+.|.-.| |.| +.++.......|.|++||. |..|+... +.
T Consensus 497 ~~~c~C~P--C~ngg~~~l~g~~C~C~C~~g~~----G~~Ce~~~-~~ 537 (913)
T 3t5o_A 497 FDPCQCAP--CPNNGRPTLSGTECLCVCQSGTY----GENCEKQS-PD 537 (913)
T ss_dssp TCGGGSCC--BTTTBEEEEETTEEEEECCTTBC----STTSCCBC-SS
T ss_pred cccccCCC--CCCCCEeecCCCceEEEccCCcc----ccCccCcc-cc
Confidence 45565455 876 7888878888999999997 88886433 44
Done!