Your job contains 1 sequence.
>psy11809
LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAE
VLKGKLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYN
FLQFCELAIKNCKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNIN
YSNTLHDREIVLSNDWVIKIGRGLDIFCHVPEFSIGFTDLSLRPCKETVVNIFHRASLIK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11809
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P5I2 - symbol:MITD1 "Uncharacterized protein"... 529 6.5e-51 1
UNIPROTKB|Q8WV92 - symbol:MITD1 "MIT domain-containing pr... 520 5.8e-50 1
RGD|1307700 - symbol:Mitd1 "MIT, microtubule interacting ... 513 3.2e-49 1
MGI|MGI:1916278 - symbol:Mitd1 "MIT, microtubule interact... 499 9.8e-48 1
UNIPROTKB|F1STE3 - symbol:MITD1 "Uncharacterized protein"... 496 2.0e-47 1
UNIPROTKB|E2RPI7 - symbol:MITD1 "Uncharacterized protein"... 493 4.2e-47 1
UNIPROTKB|E1BGA2 - symbol:E1BGA2 "Uncharacterized protein... 489 1.1e-46 1
ZFIN|ZDB-GENE-040426-923 - symbol:mitd1 "MIT, microtubule... 469 1.5e-44 1
UNIPROTKB|B8ZZL5 - symbol:MITD1 "MIT domain-containing pr... 248 5.7e-36 2
FB|FBgn0050398 - symbol:CG30398 species:7227 "Drosophila ... 270 1.8e-23 1
DICTYBASE|DDB_G0276347 - symbol:DDB_G0276347 "microtubule... 153 1.3e-13 2
UNIPROTKB|F8WCY2 - symbol:MITD1 "MIT domain-containing pr... 130 2.3e-08 1
WB|WBGene00021334 - symbol:vps-4 species:6239 "Caenorhabd... 112 0.00073 1
>UNIPROTKB|F1P5I2 [details] [associations]
symbol:MITD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] InterPro:IPR007330 Pfam:PF04212 SMART:SM00745
OMA:RFNNGWM GeneTree:ENSGT00390000010868 EMBL:AADN02017694
IPI:IPI00597733 Ensembl:ENSGALT00000027060 Uniprot:F1P5I2
Length = 252
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 110/230 (47%), Positives = 155/230 (67%)
Query: 8 RAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLD 67
RAVELD R+ ESL YQ+G+ LL+ V+G ++ +Q+ R KI Y+ RAE +K ++
Sbjct: 24 RAVELDLASRFQESLVCYQEGIDLLLQVVKGTKDEAKKQRYRQKISEYMTRAEDIKKHIE 83
Query: 68 EKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCEL 127
++K+ G YH+QI+I N G YEKLF +L E V ++ V DPYI N HQ YNFL+FCE+
Sbjct: 84 KEKQDGKYHKQIKIEENATGFGYEKLFQEYLTEIVSEVWVEDPYIRNVHQLYNFLRFCEM 143
Query: 128 AIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSNTLH 186
+K CK V+ I+LLT+Y + N R +Q L+++++SLR ITLN+ +S+++H
Sbjct: 144 LVKGPCK-VRTIHLLTSYDE----GN--GRNQQTSGLEEIKQSLRNHGITLNVAFSSSIH 196
Query: 187 DREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
DREI +N W+IKIGRGLD F P+ FSIG+ D LRPC ET V++FH
Sbjct: 197 DREIRFNNGWMIKIGRGLDYF-KKPQGRFSIGYCDFDLRPCHETTVDVFH 245
>UNIPROTKB|Q8WV92 [details] [associations]
symbol:MITD1 "MIT domain-containing protein 1" species:9606
"Homo sapiens" [GO:0006810 "transport" evidence=IEA] [GO:0031902
"late endosome membrane" evidence=IEA] [GO:2000695 "cytokinetic
cell separation involved in cell cycle cytokinesis" evidence=IMP]
[GO:0019898 "extrinsic to membrane" evidence=IDA] [GO:0000281
"cytokinesis after mitosis" evidence=IMP] [GO:0030496 "midbody"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR007330 GO:GO:0043231 GO:GO:0031902
GO:GO:0015031 Pfam:PF04212 SMART:SM00745 PDB:2YMB PDB:4A5X
PDBsum:2YMB PDBsum:4A5X EMBL:AC092587 EMBL:BC018453 EMBL:AL161992
IPI:IPI00103065 RefSeq:NP_620153.1 UniGene:Hs.14222 PDB:4A5Z
PDBsum:4A5Z ProteinModelPortal:Q8WV92 SMR:Q8WV92 IntAct:Q8WV92
STRING:Q8WV92 PhosphoSite:Q8WV92 DMDM:74730820 PaxDb:Q8WV92
PRIDE:Q8WV92 DNASU:129531 Ensembl:ENST00000289359 GeneID:129531
KEGG:hsa:129531 UCSC:uc002szs.1 CTD:129531 GeneCards:GC02M099777
HGNC:HGNC:25207 HPA:HPA036162 neXtProt:NX_Q8WV92
PharmGKB:PA147357601 eggNOG:NOG295654 HOGENOM:HOG000006736
HOVERGEN:HBG056049 InParanoid:Q8WV92 OMA:RFNNGWM PhylomeDB:Q8WV92
GenomeRNAi:129531 NextBio:82602 ArrayExpress:Q8WV92 Bgee:Q8WV92
CleanEx:HS_MITD1 Genevestigator:Q8WV92 GermOnline:ENSG00000158411
Uniprot:Q8WV92
Length = 249
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 106/237 (44%), Positives = 158/237 (66%)
Query: 2 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEV 61
A +L RAVELD R+ ++L YQ+G+ LL+ ++G + + +R+KI Y++RAE
Sbjct: 15 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 74
Query: 62 LKGKLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNF 121
+K LD++K+ G YH+QI+I N G +YE LF +L+E V ++ + DPYI + HQ YNF
Sbjct: 75 IKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNF 134
Query: 122 LQFCELAIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNIN 180
L+FCE+ IK CK VK I+LLT+ + + +V+Q L++++ESLR + L +
Sbjct: 135 LRFCEMLIKRPCK-VKTIHLLTSLDEGIE------QVQQSRGLQEIEESLRSHGVLLEVQ 187
Query: 181 YSNTLHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFHR 235
YS+++HDREI +N W+IKIGRGLD F P+ FS+G+ D LRPC ET V+IFH+
Sbjct: 188 YSSSIHDREIRFNNGWMIKIGRGLDYF-KKPQSRFSLGYCDFDLRPCHETTVDIFHK 243
>RGD|1307700 [details] [associations]
symbol:Mitd1 "MIT, microtubule interacting and transport, domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000281
"cytokinesis after mitosis" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0019898
"extrinsic to membrane" evidence=ISO] [GO:0030496 "midbody"
evidence=IEA;ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:2000695 "cytokinetic cell separation involved in cell cycle
cytokinesis" evidence=ISO] InterPro:IPR007330 RGD:1307700
GO:GO:0031902 GO:GO:0015031 Pfam:PF04212 HSSP:O75351 SMART:SM00745
CTD:129531 eggNOG:NOG295654 HOGENOM:HOG000006736 HOVERGEN:HBG056049
OrthoDB:EOG4933JQ EMBL:BC088263 IPI:IPI00366933
RefSeq:NP_001009714.1 UniGene:Rn.92704 ProteinModelPortal:Q5I0J5
SMR:Q5I0J5 STRING:Q5I0J5 GeneID:363219 KEGG:rno:363219
UCSC:RGD:1307700 InParanoid:Q5I0J5 NextBio:682872
ArrayExpress:Q5I0J5 Genevestigator:Q5I0J5
GermOnline:ENSRNOG00000018467 Uniprot:Q5I0J5
Length = 249
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 107/233 (45%), Positives = 152/233 (65%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKG 64
+L RAVELD R+ ++L YQ+G+ LL+ ++G + +R KI Y++RAE +K
Sbjct: 18 VLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRSTLRTKISGYMDRAENIKK 77
Query: 65 KLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQF 124
LD++K+ G YH+QI+I N G +YE LF +L E V ++ + DPYI HQ YNFL+F
Sbjct: 78 YLDQEKEDGKYHKQIKIEENATGFSYESLFREYLQETVTEVWIEDPYIRQTHQLYNFLRF 137
Query: 125 CELAIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSN 183
CE+ IK CK V+ I+LLT+ D N +Q L+++++SLR + L INYS+
Sbjct: 138 CEMLIKKPCK-VRTIHLLTS-GDEG-FGN----TQQSSGLEEIKQSLRSHGVVLEINYSS 190
Query: 184 TLHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
++HDREI +N W+IKIGRGLD F P+ FS+G+ DL LRPC ET V+IFH
Sbjct: 191 SIHDREIRFNNGWMIKIGRGLDYF-KKPQGRFSLGYCDLDLRPCHETTVDIFH 242
>MGI|MGI:1916278 [details] [associations]
symbol:Mitd1 "MIT, microtubule interacting and transport,
domain containing 1" species:10090 "Mus musculus" [GO:0000281
"cytokinesis after mitosis" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=ISO]
[GO:2000695 "cytokinetic cell separation involved in cell cycle
cytokinesis" evidence=ISO] InterPro:IPR007330 MGI:MGI:1916278
GO:GO:0031902 GO:GO:0015031 Pfam:PF04212 SMART:SM00745 CTD:129531
eggNOG:NOG295654 HOGENOM:HOG000006736 HOVERGEN:HBG056049
OMA:RFNNGWM EMBL:AK005342 EMBL:AK171903 EMBL:BC020137
IPI:IPI00118959 RefSeq:NP_081189.1 UniGene:Mm.63984 PDB:1WFD
PDBsum:1WFD ProteinModelPortal:Q8VDV8 SMR:Q8VDV8 IntAct:Q8VDV8
STRING:Q8VDV8 PhosphoSite:Q8VDV8 PaxDb:Q8VDV8 PRIDE:Q8VDV8
Ensembl:ENSMUST00000027257 Ensembl:ENSMUST00000139725 GeneID:69028
KEGG:mmu:69028 UCSC:uc007asi.1 GeneTree:ENSGT00390000010868
InParanoid:Q8VDV8 OrthoDB:EOG4933JQ EvolutionaryTrace:Q8VDV8
NextBio:328419 Bgee:Q8VDV8 Genevestigator:Q8VDV8
GermOnline:ENSMUSG00000026088 Uniprot:Q8VDV8
Length = 249
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 104/233 (44%), Positives = 150/233 (64%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKG 64
+L RAVELD R+ ++L YQ+G+ LL+ ++G + +R KI Y++RAE +K
Sbjct: 18 VLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKK 77
Query: 65 KLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQF 124
LD++K+ G YH+QI+I N G +YE LF +L E V ++ + DPYI HQ YNFL+F
Sbjct: 78 YLDQEKEDGKYHKQIKIEENATGFSYESLFREYLHETVTEVWIEDPYIRQTHQLYNFLRF 137
Query: 125 CELAIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSN 183
CE+ IK CK V+ I+LLT+ + +Q L+++++SL + L INYS+
Sbjct: 138 CEMLIKKPCK-VRTIHLLTSGYEG------LGNTQQSSGLEEIKQSLGSHGVVLEINYSS 190
Query: 184 TLHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
++HDREI +N W+IKIGRGLD F P+ FS+G+ DL LRPC ET V+IFH
Sbjct: 191 SIHDREIRFNNGWMIKIGRGLDYF-KKPQGRFSLGYYDLDLRPCHETTVDIFH 242
>UNIPROTKB|F1STE3 [details] [associations]
symbol:MITD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] InterPro:IPR007330 Pfam:PF04212 SMART:SM00745
OMA:RFNNGWM GeneTree:ENSGT00390000010868 EMBL:FP102935
RefSeq:XP_003124953.2 Ensembl:ENSSSCT00000008964 GeneID:100523366
KEGG:ssc:100523366 Uniprot:F1STE3
Length = 249
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 99/230 (43%), Positives = 152/230 (66%)
Query: 8 RAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLD 67
RA+EL+ R+ ++L YQ+G+ LL+ ++G ++ + +R +I Y++RAE +K LD
Sbjct: 21 RALELESESRYPQALVCYQEGIDLLLQVLKGTKDETKRCTLRKRISEYMDRAENIKKYLD 80
Query: 68 EKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCEL 127
++K+ G YH+QI+I N G +YE LF +L E V ++ + DPYI + HQ YNFL+FCE+
Sbjct: 81 QEKEAGKYHKQIKIEENATGFSYESLFQEYLSETVTEVWIEDPYIRHTHQLYNFLRFCEM 140
Query: 128 AIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSNTLH 186
+K CK VK I+LLT+ + + +Q L++++ESLR + L++ YS+++H
Sbjct: 141 LVKRPCK-VKTIHLLTSSEEG------IGKEQQSSGLQEIKESLRNHGVLLDLEYSSSIH 193
Query: 187 DREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
DREI +N W+IKIGRGLD F P+ FS+G+ D LRPC ET V+IFH
Sbjct: 194 DREIRFNNGWMIKIGRGLDYF-KKPQGRFSLGYCDFDLRPCHETTVDIFH 242
>UNIPROTKB|E2RPI7 [details] [associations]
symbol:MITD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] InterPro:IPR007330 Pfam:PF04212
SMART:SM00745 CTD:129531 OMA:RFNNGWM GeneTree:ENSGT00390000010868
EMBL:AAEX03007446 RefSeq:XP_531787.2 UniGene:Cfa.13593
ProteinModelPortal:E2RPI7 Ensembl:ENSCAFT00000003600 GeneID:474559
KEGG:cfa:474559 NextBio:20850550 Uniprot:E2RPI7
Length = 249
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 103/238 (43%), Positives = 159/238 (66%)
Query: 1 LAQFLLI-RAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRA 59
+A F ++ RA+ELD R+ ++L YQ+G+ L++ +RG + ++ +R +I Y+++A
Sbjct: 13 IAAFTVLKRAMELDSGSRYQQALVCYQEGIDLLMQVLRGTKDDTKKRNLRKQISGYMDKA 72
Query: 60 EVLKGKLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCY 119
E++K LD++K+ G YH QI+I N G +YE LF ++L+E V ++ + DPYI HQ Y
Sbjct: 73 EIVKKYLDQEKEDGKYHMQIKIEENATGFSYESLFQQYLNETVTEVWIQDPYIRQIHQLY 132
Query: 120 NFLQFCELAIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLN 178
NFL+FCE+ IK CK VK I+LLT+ D + S K +Q L+++++SL+ + L
Sbjct: 133 NFLRFCEMLIKKPCK-VKTIHLLTSL-D--EGSGKQ---QQSSGLQEIKKSLQDHGVLLE 185
Query: 179 INYSNTLHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
+ YS+++HDREI +N W+IKIGRGLD F P+ FS+G+ D LRPC ET V+IFH
Sbjct: 186 LKYSSSVHDREIRFNNGWMIKIGRGLDYF-KKPQSRFSLGYCDFDLRPCHETTVDIFH 242
>UNIPROTKB|E1BGA2 [details] [associations]
symbol:E1BGA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] InterPro:IPR007330 Pfam:PF04212 OMA:RFNNGWM
GeneTree:ENSGT00390000010868 EMBL:DAAA02030161 IPI:IPI00688803
Ensembl:ENSBTAT00000005179 Uniprot:E1BGA2
Length = 248
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 99/233 (42%), Positives = 154/233 (66%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKG 64
+L RA++L+ R ++L YQ+G+ LL+ ++G ++ ++ +R I +++RAE LK
Sbjct: 18 VLKRALDLESESRGPQALVCYQEGIDLLLQVLKGTKDETKKRNLRKIISDHMDRAEHLKK 77
Query: 65 KLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQF 124
+LD++K+ G YH+QI+I N G +YE LF +L E V ++ + DPYI + HQ YNFL+F
Sbjct: 78 RLDQEKEAGKYHKQIKIEENATGFSYESLFQEYLSETVTEVWIEDPYIRHTHQLYNFLRF 137
Query: 125 CELAIKN-CKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSN 183
CE+ +K CK VK I+LLT+ + T + Q L+++++SLR ++L + YS+
Sbjct: 138 CEMLVKRPCK-VKTIHLLTSLDEG------TGK-DQHSGLEEIKQSLRNHGVSLELEYSS 189
Query: 184 TLHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
++HDREI +N W+IKIGRGLD F P+ FS+G+ D LRPC ET V+IFH
Sbjct: 190 SIHDREIRFNNGWIIKIGRGLDYF-KKPQSRFSLGYCDFDLRPCHETTVDIFH 241
>ZFIN|ZDB-GENE-040426-923 [details] [associations]
symbol:mitd1 "MIT, microtubule interacting and
transport, domain containing 1" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007330 ZFIN:ZDB-GENE-040426-923
Pfam:PF04212 eggNOG:NOG295654 HOGENOM:HOG000006736
HOVERGEN:HBG056049 OMA:RFNNGWM GeneTree:ENSGT00390000010868
OrthoDB:EOG4933JQ EMBL:BX942813 IPI:IPI00497942 UniGene:Dr.83003
Ensembl:ENSDART00000128352 Uniprot:B0S8J9
Length = 246
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 96/232 (41%), Positives = 148/232 (63%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKG 64
+L RAV+LD R+ E+L YQ+G+ LL ++ + ++ + R+KI+ Y+ RAE +K
Sbjct: 16 VLKRAVQLDNCSRFQEALVCYQEGIQLLLDVLKAVKDEAKKMHYREKIKGYMERAEQIKE 75
Query: 65 KLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQF 124
+ K+ G YHEQI+IA++ G +YE LF ++ + + ++ V DPY+ + HQ YNFL+F
Sbjct: 76 HTTKLKEEGKYHEQIKIADSSTGYSYESLFKPYITDGLTEVWVEDPYVRHVHQLYNFLRF 135
Query: 125 CELAIKNCKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSNT 184
CE+ +K VK I+LLT+ ++ + +Q L ++++SL I L+I YS+T
Sbjct: 136 CEMLLKCPSTVKTIHLLTS-------QDEDSSTQQSSALAEMKQSLLSKDICLDIQYSST 188
Query: 185 LHDREIVLSNDWVIKIGRGLDIFCHVPE--FSIGFTDLSLRPCKETVVNIFH 234
+HDREI +N W+IKIGRGLD F P+ FS+G+ D LR C ET V+IFH
Sbjct: 189 IHDREIRFNNGWIIKIGRGLDYF-KKPKGRFSVGYCDYDLRECHETTVDIFH 239
>UNIPROTKB|B8ZZL5 [details] [associations]
symbol:MITD1 "MIT domain-containing protein 1" species:9606
"Homo sapiens" [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR007330 GO:GO:0043231
Pfam:PF04212 SMART:SM00745 EMBL:AC092587 HGNC:HGNC:25207
HOGENOM:HOG000006736 HOVERGEN:HBG056049 IPI:IPI00916171
ProteinModelPortal:B8ZZL5 SMR:B8ZZL5 STRING:B8ZZL5
Ensembl:ENST00000409107 ArrayExpress:B8ZZL5 Bgee:B8ZZL5
Uniprot:B8ZZL5
Length = 197
Score = 248 (92.4 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 48/116 (41%), Positives = 76/116 (65%)
Query: 2 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEV 61
A +L RAVELD R+ ++L YQ+G+ LL+ ++G + + +R+KI Y++RAE
Sbjct: 15 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 74
Query: 62 LKGKLDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQ 117
+K LD++K+ G YH+QI+I N G +YE LF +L+E V ++ + DPYI + HQ
Sbjct: 75 IKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQ 130
Score = 156 (60.0 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 31/72 (43%), Positives = 51/72 (70%)
Query: 149 QHSNK-TARVKQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIF 207
+H+++ +V+Q L++++ESLR + L + YS+++HDREI +N W+IKIGRGLD F
Sbjct: 126 RHTHQGIEQVQQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYF 185
Query: 208 CHVPE--FSIGF 217
P+ FS+G+
Sbjct: 186 -KKPQSRFSLGY 196
>FB|FBgn0050398 [details] [associations]
symbol:CG30398 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE013599 GeneTree:ENSGT00390000010868
RefSeq:NP_726113.1 UniGene:Dm.15717 ProteinModelPortal:Q8MLV2
SMR:Q8MLV2 PRIDE:Q8MLV2 EnsemblMetazoa:FBtr0071710 GeneID:246591
KEGG:dme:Dmel_CG30398 UCSC:CG30398-RA FlyBase:FBgn0050398
InParanoid:Q8MLV2 OMA:GHIMEAI OrthoDB:EOG4573PD PhylomeDB:Q8MLV2
GenomeRNAi:246591 NextBio:843131 ArrayExpress:Q8MLV2 Bgee:Q8MLV2
Uniprot:Q8MLV2
Length = 267
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 69/229 (30%), Positives = 120/229 (52%)
Query: 6 LIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGK 65
+I A++ ++ G E++ Y++ + +L + ++ +Q ++ Y RA+ L+ +
Sbjct: 21 IISALKCEQTGHIMEAILLYEESIFKLSQMADAEPSR--RQLCGKYLKMYEARAKQLRDQ 78
Query: 66 LDEKKKMGNYHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFC 125
+ + I I +G +Y++LFG +LD+ V + + +P++ N L F
Sbjct: 79 VKGHLHTSRMLDHITIEQGARGRSYQRLFGPYLDDAVREAHLNEPHLTEPPHFRNLLNFF 138
Query: 126 ELAIKNCKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSNTL 185
E+ +KNC+ +K I L T RP + TA Q + L+Q+Q L I +N ++L
Sbjct: 139 EVLVKNCRYLKYIRLTT----RP---DATAPKNQLQMLQQMQSDLAGGNIQMNFQMDDSL 191
Query: 186 HDREIVLSNDWVIKIGRGLDIFCHVP-EFSIGFTDLSLRPCKETVVNIF 233
HDR+IVLS+ VIKIGRGL F + +S+G D R C T V+I+
Sbjct: 192 HDRKIVLSSGVVIKIGRGLHYFEPMEGSYSLGLCDFDFRKCLATEVDIW 240
>DICTYBASE|DDB_G0276347 [details] [associations]
symbol:DDB_G0276347 "microtubule interacting and
transport domain-containing protein (MIT)" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR007330
dictyBase:DDB_G0276347 EMBL:AAFI02000014 Pfam:PF04212
eggNOG:NOG295654 RefSeq:XP_643186.1 ProteinModelPortal:Q8T127
EnsemblProtists:DDB0302575 GeneID:8620458 KEGG:ddi:DDB_G0276347
OMA:LVISKCI Uniprot:Q8T127
Length = 315
Score = 153 (58.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 46/133 (34%), Positives = 68/133 (51%)
Query: 80 EIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCELAIKNC--KNVKR 137
+I N G +YE LFG L + I V DPYI +HQ NF++ EL I C K++K
Sbjct: 184 KIENGSIGNSYETLFGDKLIGST-WIKVEDPYIRTRHQIDNFVKLIELVISKCIFKDLKS 242
Query: 138 INLLTTYADRPQHSNK------TARVKQEENLK----QLQESLR-KMKITLNINYSNTLH 186
+ + +P K T +QE+ LK QL++ + + I N +S+T+H
Sbjct: 243 QSDSSFKLQKPSTKFKIDLTTSTESQQQEDELKLTFYQLKDQISTQYNIVFNYQFSSTIH 302
Query: 187 DREIVLSNDWVIK 199
DR I SN ++IK
Sbjct: 303 DRSIECSNGYLIK 315
Score = 75 (31.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLK 63
L+ +A D G+++ +L Y +G+ L+ ++ N Q ++ KI Y NRAE LK
Sbjct: 14 LIQQAAISDRNGQYSIALNLYTNGLEGLMSALKLEKNDRVIQTLKIKITEYFNRAEQLK 72
>UNIPROTKB|F8WCY2 [details] [associations]
symbol:MITD1 "MIT domain-containing protein 1" species:9606
"Homo sapiens" [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR007330 GO:GO:0043231
Pfam:PF04212 SMART:SM00745 EMBL:AC092587 HGNC:HGNC:25207
IPI:IPI00917485 ProteinModelPortal:F8WCY2 SMR:F8WCY2
Ensembl:ENST00000413710 ArrayExpress:F8WCY2 Bgee:F8WCY2
Uniprot:F8WCY2
Length = 105
Score = 130 (50.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 2 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEV 61
A +L RAVELD R+ ++L YQ+G+ LL+ ++G + + +R+KI Y++RAE
Sbjct: 15 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 74
Query: 62 LKGKLDEKKK 71
+K LD++K+
Sbjct: 75 IKKYLDQEKE 84
>WB|WBGene00021334 [details] [associations]
symbol:vps-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 GO:GO:0043652
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:FO080952 RefSeq:NP_490816.4
ProteinModelPortal:Q9BL83 SMR:Q9BL83 IntAct:Q9BL83
MINT:MINT-6670337 STRING:Q9BL83 PaxDb:Q9BL83
EnsemblMetazoa:Y34D9A.10.1 EnsemblMetazoa:Y34D9A.10.2 GeneID:189590
KEGG:cel:CELE_Y34D9A.10 UCSC:Y34D9A.10 CTD:189590
WormBase:Y34D9A.10 InParanoid:Q9BL83 NextBio:942940 Uniprot:Q9BL83
Length = 430
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 5 LLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQK--IRDKIETYINRAEVL 62
L+ +A E D GR+ ++L Y + E H ++GD+Q+ IRDK+ Y+NRAE +
Sbjct: 12 LVTKATEEDTAGRYDQALRLYDQAI-EYFLHAIKYESQGDKQRNAIRDKVGQYLNRAEQI 70
Query: 63 KGKLDE---KKKMGNYHEQIEIANNEKGVTYEKLFGRFLDE--NVEQIDV 107
K L + +KK + + +K +KL G + E NV+ D+
Sbjct: 71 KTHLKDGKTQKKPVKDGKDDSDEDEDKKKFQDKLSGAIVMEKPNVKWTDI 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 240 0.00093 113 3 11 22 0.42 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 598 (64 KB)
Total size of DFA: 193 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.56u 0.08s 26.64t Elapsed: 00:00:06
Total cpu time: 26.57u 0.08s 26.65t Elapsed: 00:00:06
Start: Thu Aug 15 10:59:34 2013 End: Thu Aug 15 10:59:40 2013