BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11815
(141 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242006694|ref|XP_002424182.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
gi|212507523|gb|EEB11444.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
Length = 4716
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 28/136 (20%)
Query: 30 DLDP---DQRISYKISAGNPESYFNID-----------------------IGSDLTGGPD 63
D DP D ++SY I G+ YF+ID D P
Sbjct: 1158 DQDPPGDDSKVSYYIKGGDGVGYFSIDENGQIKTLAVFDVETKSHYWLTVYAEDHGVIPL 1217
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKI 122
L VY+ ++NVNDN P+T +P+YYA + EN +SG L IV+L+A+D DLDP+ +I YKI
Sbjct: 1218 SSRLEVYVAIENVNDNSPLTDEPIYYASVPENSESGKL-IVELSATDADLDPNNKIFYKI 1276
Query: 123 SAGNPESYFNIDIGSG 138
+AGNP+SYF ID SG
Sbjct: 1277 TAGNPQSYFTIDSISG 1292
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%), Gaps = 2/54 (3%)
Query: 1 MTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+T +P+YYA + EN +SG L IV+L+A+D DLDP+ +I YKI+AGNP+SYF ID
Sbjct: 1236 LTDEPIYYASVPENSESGKL-IVELSATDADLDPNNKIFYKITAGNPQSYFTID 1288
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
YY I E++ IV++ A+ D + ISY I GN F I+ +
Sbjct: 3320 TYYGTIPESEPIGTEIVRVLATSKDTGINAEISYSIVGGNEHKKFEINQKTGVVKIVEPL 3379
Query: 57 DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D D + I V I V + NDN P+ + Y A I E+
Sbjct: 3380 DFERAKDYLLTIQATDGGVPPLSNHATVNITVTDSNDNPPVFIQMSYSATIREDTQVGDK 3439
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + + +ISY I G+ ++ F ID +G L
Sbjct: 3440 ILQVTANDLDSNLNGQISYSIINGDRQNQFRIDKDNGYL 3478
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 8 YAQIVENQSGIL-PIVQLAASDGDLDPDQRISY------------KISAGNPESYFNIDI 54
+ ++++N GI I L DGD D RI I+ N +NI +
Sbjct: 350 FVRVIDNDKGIHGAIKSLDIVDGDSDGHFRIKKIDDGEYSIELLECINRDNHPKLYNITL 409
Query: 55 GSDLTGGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +G P Q + V +++ +NDN+P+ +Y I EN P+++L ++ D
Sbjct: 410 RAVDSGTPPKQSFKSVLLKIAGINDNIPIFDREIYEVNIPENSPVNSPVIRLKVANPDES 469
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ +I GN + F ++ +G L
Sbjct: 470 KNAKVFLEIVGGNEGNEFYLNSETGML 496
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 52 IDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
+D G TG P +Y IV I + +VNDN P+ P Y +I E+ + ++ASD
Sbjct: 992 VDGGEKDTGKP-SLYSDAIVQIHIDDVNDNAPVFALPSYTVRIREDVPVGTVVAVVSASD 1050
Query: 110 GDLDPDQRISYKISA-GNPESYFNIDIGSGSL 140
DL I Y ISA + E F ID SG++
Sbjct: 1051 PDLREGGEIRYFISAETDGEGLFTIDKQSGTI 1082
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 37/164 (22%)
Query: 3 LDPVYYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAGNP-------------- 46
L+P Q+ E+ ++ ++Q + DGD ++ YKI G+P
Sbjct: 1454 LNPEQQVQVTESDDVGYLVALIQGSDKDGD-----KLWYKIVGGDPRNEFFIGRETGNIL 1508
Query: 47 ---------ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ Y+N+ I +T G Y VY+ V N ND+ P Y I EN
Sbjct: 1509 LAKTLDWETQHYYNLTIS--VTDGFHSTYGQVYVMVINSNDHRPKFSKNTYLVDISENVE 1566
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAG-NPESY--FNIDIGSG 138
I++L ASD D D ++ Y + A +P SY F +D SG
Sbjct: 1567 PGTEILELIASDE--DEDDKLFYSLHASRSPTSYDIFKVDSLSG 1608
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESY--FNID--------- 53
Y I EN I++L ASD D D ++ Y + A +P SY F +D
Sbjct: 1556 TYLVDISENVEPGTEILELIASDED--EDDKLFYSLHASRSPTSYDIFKVDSLSGIVKLA 1613
Query: 54 ---------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ D + Y V ++V + ND+ P + P+ A++ E
Sbjct: 1614 APLDRETMEEHVLIVMVKDQDTPSKRNYAKVIVRVHDHNDHAPEFVSPIIQAKVFETSEV 1673
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A D D + + +I Y I +GN + F+I G L
Sbjct: 1674 GTIVAKILAIDKDKEQNAKIHYSIISGNVGNIFSIHPQLGDL 1715
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESY--------------- 49
+Y A + E+ Q G L + +L A+D D+ +++I Y E +
Sbjct: 3216 MYSATLPEDVQIGTL-VTKLHATDKDIGINRKIKYTFIDSANEHFKIEPDSGIVTLLKPL 3274
Query: 50 -------FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+N+ I + G P + + + V ++NDN P YY I E++
Sbjct: 3275 DREQKATYNLSIKAFDQGTPQLSQITKLLVLVLDINDNPPEFAYKTYYGTIPESEPIGTE 3334
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IV++ A+ D + ISY I GN F I+ +G
Sbjct: 3335 IVRVLATSKDTGINAEISYSIVGGNEHKKFEINQKTG 3371
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 26/146 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKIS--AGNPESYFNID------------------------I 54
I ++ D D +Q++ ++I + N YF+ID +
Sbjct: 2400 IFRVIVKDNDTGINQKVRFEIQMDSSNSSEYFHIDPEEGTIYLKKSLDHEVNSYHHFTVV 2459
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+DL V++ V ++NDN P P Y + E+ I + ASD D
Sbjct: 2460 ANDLGVPSLSSTSHVWVNVIDMNDNPPKFEQPSYNCLLSEHAVRGQFITVITASDPDFVD 2519
Query: 115 DQRISYKISAGNPESYFNIDIGSGSL 140
++ Y I GN F++D +G L
Sbjct: 2520 RDKLYYAIVGGNENQIFSVDHSTGVL 2545
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSDLTG--- 60
+Y I EN P+++L ++ D + ++ +I GN E Y N + G T
Sbjct: 443 IYEVNIPENSPVNSPVIRLKVANPDESKNAKVFLEIVGGNEGNEFYLNSETGMLYTAKIL 502
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I V ++NDN P I EN+
Sbjct: 503 DAEEKSFYTLTVSAIDQGTVRGRKQSSAKVKINVLDMNDNDPTFDTSEMNVVIDENEPAG 562
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D + ISY I+ NP F ID SG
Sbjct: 563 TTVLKVTAKDKDFGENSYISYSIANLNPVP-FEIDHFSG 600
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D V+ +I EN ++++AA D D +D + +ISY I+ G+ F++ D GS
Sbjct: 941 DFVFEGKIRENMPKGTLVMKIAARDMDGMDLNSKISYSITGGDGLGIFSVNDQGSIHSLT 1000
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYI+V+N NDN+P+T PVYY + E SG
Sbjct: 1001 QLDAESKNFYWLTLCAQDNAIVPFSNCVKVYIEVENENDNIPLTTKPVYYVNVTEGSSGK 1060
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A D D+DP Q+I+Y I +GN YF+ID +G L
Sbjct: 1061 NEIIQLKAVDPDIDPSQKITYSIISGNLVGYFDIDPNTGVL 1101
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E SG I+QL A D D+DP Q+I+Y I +GN YF+ID +
Sbjct: 1043 LTTKPVYYVNVTEGSSGKNEIIQLKAVDPDIDPSQKITYSIISGNLVGYFDIDPNTGVLK 1102
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + V + V ++NDN P+ VY Q+
Sbjct: 1103 TTERKLDRENQAEHILEVSISDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQVPST 1162
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ A D D + RI+Y I +G ++ F ID SG +
Sbjct: 1163 TYINESIFQVHAIDNDDGENGRITYSIKSGKKKNKFRIDSYSGHI 1207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ + IS GN E++F I
Sbjct: 1267 LTENDKPGFLVTQILAVDEDND---QLWFNISGGNEENHFYIGRDSGNVLLSKYLDYETV 1323
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + VY ++IQV + NDN P +Y+ I EN I+QL A+D
Sbjct: 1324 TSYNLTISVTDGSNIVYTWLFIQVVDTNDNAPQFTKEIYHVNISENIDEESVIMQLHATD 1383
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1384 R--DEDKKLFYHLHATQDPSSLTLFRIDSISGNV 1415
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
Y + + EN + + ++ A+ D+ + I Y I +GN + FNI+ + + G D
Sbjct: 3127 YKSHMYENVTRGSEVCKIHATSKDIGVNAEILYYIISGNEQQKFNINSSTGVLWVNGTVD 3186
Query: 64 ----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I +++VNDN P +Y + E+ S LPI
Sbjct: 3187 YEKSKFYFLTVQAIDGGSPPFSNIAYVNITIEDVNDNTPTFTQNIYRTSVREDISVNLPI 3246
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D + + I Y I G+ S F I+ +G++
Sbjct: 3247 IDVKATDEDSNLNGIIKYNIVKGDSLSQFRINHSNGTIS 3285
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKIS 123
Y VYI V + NDN P + +Y ++ EN + I+++ A+D D + D R +
Sbjct: 2691 YAEVYIHVTDENDNYPKFDNTIYSCEVAENTEKVASILKVTATDADTGSNGDVRYYFDEE 2750
Query: 124 AGNPESYFNIDIGSG 138
+ S F+IDI +G
Sbjct: 2751 SNGIRSIFDIDIYTG 2765
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI V ++NDN PM ++ YYA + + I+++ A D D + + Y++ GN E
Sbjct: 1972 VYISVLDINDNCPMFVNMPYYASVSVGFTKGTIILKVKAIDLDSAENGEVRYELKKGNGE 2031
Query: 129 SYFNIDIGSGSLG 141
F ID +G L
Sbjct: 2032 -LFKIDRKTGELS 2043
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I VQN+NDN P Y +++++ S + ++A D LD ISY+
Sbjct: 445 QTEIAIDIIVQNINDNRPQFERVNCYGKVIKSASIGSEVFTISAID--LDVGDEISYRSI 502
Query: 124 AGNPESYFNIDIGSGSLG 141
+GN + FN+D +G++
Sbjct: 503 SGNEDGCFNLDSTTGTIS 520
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y I E+ + ++ A+D D +++I Y ++ N + YF I + L D
Sbjct: 3023 YRVSIQEDAQLQTLVTKVHATDKDFGMNRKIKYSLTGTNSD-YFGISKSTGIIKLEKNLD 3081
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + +Y I + ++NDN P Y + + EN + +
Sbjct: 3082 RETISLYNFTVKVEDFGKPILSSVANIVINILDINDNPPEFSLRQYKSHMYENVTRGSEV 3141
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A+ D+ + I Y I +GN + FNI+ +G L
Sbjct: 3142 CKIHATSKDIGVNAEILYYIISGNEQQKFNINSSTGVL 3179
>gi|195129685|ref|XP_002009286.1| GI13952 [Drosophila mojavensis]
gi|193920895|gb|EDW19762.1| GI13952 [Drosophila mojavensis]
Length = 2436
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNID--------- 53
D +Y +I EN ++ + A D D +D + +ISY I+ G+ F+++
Sbjct: 1086 DFIYEGKIQENMPKGTLVMNVTARDMDSMDINSKISYSITGGDGLGIFSVNKQGSIQSLT 1145
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D P ++VYI V+N NDN+P+T PVYY + E SG
Sbjct: 1146 QLDAETKSFYWLTLCAQDNAIVPLTNCVMVYIDVKNENDNIPLTTKPVYYVNVTEGSSGK 1205
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D+DP Q I+Y I++GN YF+I+ +G L
Sbjct: 1206 HEIIQLKATDPDIDPSQTITYSITSGNLIGYFSIEPHTGIL 1246
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E SG I+QL A+D D+DP Q I+Y I++GN YF+I+ +
Sbjct: 1188 LTTKPVYYVNVTEGSSGKHEIIQLKATDPDIDPSQTITYSITSGNLIGYFSIEPHTGILR 1247
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + I V + V ++NDN P+ VY Q+
Sbjct: 1248 TTERKLDRENQAEHILEISISDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQVPST 1307
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ A D D + RI+Y I +G ++ F ID SG +
Sbjct: 1308 THINESIFQVHAIDNDDGENSRITYSIKSGKKKNKFRIDSFSGHI 1352
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL---------- 58
+ EN + Q+ A D D D ++ Y IS GN +YF I D G+ L
Sbjct: 1412 LTENDKPGFLVTQIQAIDEDND---QLWYNISGGNEGNYFYIGRDTGNVLLSKYLDYETQ 1468
Query: 59 ---------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
T G + + +YIQV + NDN P +Y+ I EN I+QL A+D
Sbjct: 1469 TSYNLSISVTDGSNIAHTWLYIQVVDTNDNAPQFTKEIYHVNISENIEEESVIMQLHATD 1528
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y++ A +P S F ID SG++
Sbjct: 1529 R--DEDKKLFYQLHATQDPSSLTLFRIDSISGNV 1560
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I V ++NDN PM ++ YYA + + I+++ A D D + + Y++ GN E
Sbjct: 2118 VHISVLDINDNCPMFVNMPYYASVSVGFTKGTIIMKVKAIDLDSAENGEVRYELKKGNGE 2177
Query: 129 SYFNIDIGSGSLG 141
F +D +G L
Sbjct: 2178 -LFKMDRKTGELS 2189
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D Y +I EN ++ + A D D +D + +ISY I+ G+ F++ D GS
Sbjct: 1049 DFAYEGKIRENMPKGTLVMNITARDMDGMDINAKISYSITGGDGLGIFSVNDQGSIHSLT 1108
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYI+V+N NDN+P+T PVYY + E SG
Sbjct: 1109 QLDAETKNFYWLTLCAQDNAIVPLSNCVKVYIEVENENDNIPLTTKPVYYVNVTEGTSGK 1168
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A D D+DP Q I+Y I++GN YF+I+ +G L
Sbjct: 1169 TEIIQLRAIDPDIDPLQTITYSITSGNHVGYFDIEPHTGLL 1209
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T PVYY + E SG I+QL A D D+DP Q I+Y I++GN YF+I+ + L
Sbjct: 1151 LTTKPVYYVNVTEGTSGKTEIIQLRAIDPDIDPLQTITYSITSGNHVGYFDIEPHTGLLK 1210
Query: 61 GPDQVY-------------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
++ V + V ++NDN P+ VY Q+
Sbjct: 1211 TTERKLDRENQSEHILEVSISDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQVPST 1270
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID SG +
Sbjct: 1271 TNMNESIFQVHAIDNDDGENSRITYSIKSGKKKNKFRIDSFSGHI 1315
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y + + EN + + + A+ D+ + ISY I +GN + FNI+ + L
Sbjct: 3237 YSSHVHENVTQGFDVCTVHATSKDIGVNAEISYYIISGNEQRKFNINSSTGVLWVNGTLD 3296
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + +VNDN P Y A + E+ + +PI
Sbjct: 3297 YEKTKFYFLTVQAIDGGSPPLSNIAYVNISIDDVNDNTPTFTQNNYRASVKEDVNIDVPI 3356
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D + + I Y I G+ S F+I+I +G++
Sbjct: 3357 IDVKATDEDSNLNGIIKYNIVKGDSLSQFSINISNGTIS 3395
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL---------- 58
+ EN + Q+ A D D D ++ Y IS GN ++F I D G+ L
Sbjct: 1375 LTENDKPGFLVTQILAFDEDND---QLWYNISGGNEGNHFYIGRDTGNVLLSKFLDYETQ 1431
Query: 59 ---------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
T G + + ++IQV + NDN P +Y+ I EN I+QL A+D
Sbjct: 1432 TSYNLSISVTDGSNAAHTWLFIQVVDTNDNAPQFTKELYHVNISENIEEESVIMQLHATD 1491
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y++ A +P S F ID SG++
Sbjct: 1492 R--DEDKKLFYQLHATQDPSSLTLFRIDSISGNV 1523
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 39 YKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
YKI S FN D S + VYI VQ++NDN PM ++ YYA + +
Sbjct: 2056 YKIFVEAKSSIFNRDNTS-----IRRAITSVYISVQDINDNCPMFVNMPYYASVSVGFTK 2110
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I+++ A D D + + Y++ GN E F ID +G L
Sbjct: 2111 GTIIMKVKAIDLDSAENGEVRYELKKGNGE-LFKIDRKTGELS 2152
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y I E+ + ++ A+D D +++I Y + N + YF I + L
Sbjct: 3131 PNYRVSIQEDAQLQTLVTKVHATDKDFGINRKIKYSLIGTNSD-YFEISKSTGIIKLEKN 3189
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ + +Y I + ++NDN P Y + + EN +
Sbjct: 3190 LDRETISIYNLTLIAEDYGKPIMSSVANIVINILDINDNPPEFSLRQYSSHVHENVTQGF 3249
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+ D+ + ISY I +GN + FNI+ +G L
Sbjct: 3250 DVCTVHATSKDIGVNAEISYYIISGNEQRKFNINSSTGVL 3289
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKIS 123
Y VYI V + NDN P + +Y A + EN + I+++ A+D D + D R +
Sbjct: 2800 YADVYIHVTDENDNYPKFDNTIYNADVAENTDKVASILKITATDEDTGSNGDVRYYFDDE 2859
Query: 124 AGNPESYFNIDIGSG 138
+ + F+IDI +G
Sbjct: 2860 SNGIRNVFDIDIYTG 2874
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 31 LDPD---QRISYKISAGNPESYFNIDIGSDL--------------------TGGPDQVYL 67
+DPD Q + Y I +G+ +S F I +L T G
Sbjct: 2949 IDPDSEKQTMEYYIISGDSQSQFQIGKTGELFISRPLDREQTAFYNLSILATDGKFTAMS 3008
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
V + +++VNDN+P L P Y+ I E+ + IV++ A D D D ++ Y IS
Sbjct: 3009 NVQVHIKDVNDNMPYCLKPRYHITINESIAIGSTIVEVKAMDFDSSTDFKLRYYIS 3064
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
++ +SG+L + +L LD ++ YKI A ++ G + + +
Sbjct: 3072 VMGKESGVLKVAKL------LDRERTSKYKILA-------HVQDGKEFIR---ECVSEII 3115
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V ++NDN P+ P Y I E+ + ++ A+D D +++I Y + N + Y
Sbjct: 3116 ITVNDINDNAPIFSMPNYRVSIQEDAQLQTLVTKVHATDKDFGINRKIKYSLIGTNSD-Y 3174
Query: 131 FNIDIGSG 138
F I +G
Sbjct: 3175 FEISKSTG 3182
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I V+NVNDN P Y +++++ + ++A D LD ISY++
Sbjct: 553 QTEIALEIIVKNVNDNRPQFERVNCYGKVIKSAPIGSEVFTISAID--LDMGDVISYRLI 610
Query: 124 AGNPESYFNIDIGSGSLG 141
+GN + FN+D SG+
Sbjct: 611 SGNEDGCFNLDSNSGTFS 628
>gi|170069415|ref|XP_001869219.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865287|gb|EDS28670.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 133
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
SY+ D P + V+IQVQN NDNVP+T + VYY + E+ + ++QL A
Sbjct: 41 SYWLTVCAQDQAVVPLHSCVQVFIQVQNENDNVPLTEEAVYYPSVPESSPNGVKVLQLIA 100
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D+DP Q+ISY+I++GNPE +F I+ SG L
Sbjct: 101 EDRDIDPLQQISYRITSGNPEGFFAINSTSGKL 133
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+T + VYY + E+ + ++QL A D D+DP Q+ISY+I++GNPE +F I+ S
Sbjct: 75 LTEEAVYYPSVPESSPNGVKVLQLIAEDRDIDPLQQISYRITSGNPEGFFAINSTS 130
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2 [Acyrthosiphon pisum]
Length = 4147
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPD-QRISYKISAGNPESYFNID-----------------------IGS 56
+ ++A+D D D R+ Y I G+ YF+ID +
Sbjct: 1082 VTTVSATDADPPGDVSRVGYSIVDGDGLGYFSIDSEGNIRTMVVLDVETKSSYWLTVMAF 1141
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P L VY++V+N+NDNVP+T PVYY ++ E+ PI+QL A D D+ D
Sbjct: 1142 DHATVPMHSRLEVYVEVKNINDNVPLTKAPVYYPRVKEDAPPNTPIIQLEAEDADM-SDT 1200
Query: 117 RISYKISAGNPESYFNIDIGSG 138
RI+YKI+ GNP+S F I +G
Sbjct: 1201 RITYKITTGNPQSLFAISANTG 1222
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++ E+ PI+QL A D D+ D RI+YKI+ GNP+S F I + L
Sbjct: 1167 LTKAPVYYPRVKEDAPPNTPIIQLEAEDADM-SDTRITYKITTGNPQSLFAISANTGLIT 1225
Query: 59 TGGPD-----------QVYLI------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G +V +I V I V++VNDN P L Y +I E
Sbjct: 1226 TTGRKLDRETESEHILEVTVIDDGVPVLSSTTSVVIAVEDVNDNAPEMLKKAYRFKIPET 1285
Query: 96 QSGILPIVQ 104
Q P+VQ
Sbjct: 1286 QPVQEPLVQ 1294
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 10 QIVENQSGILPIVQ-LAASDGDLDPDQRISYKISAGN--------------PESYFNIDI 54
++ + SG+ I++ L DGD D RI +G P+ Y N+ +
Sbjct: 290 KVTDRDSGVNGIIRSLEIVDGDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGY-NLSL 348
Query: 55 GSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +G P++ Y ++I++ +VNDN P+ +Y I E P+++L SD D
Sbjct: 349 RAVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEG 408
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++S +I GN F I+ +G L
Sbjct: 409 KNAQVSLEIVGGNEGGEFRINKRTGML 435
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDI---------- 54
Y I E+ S I+++ A+D D D ++ I Y I N YF+ID
Sbjct: 2365 YNISISESASFGSFILRVTATDNDTDINRVIKYSIKKDEENSTDYFHIDEKEGSIYLKQS 2424
Query: 55 --------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D P ++I V +VNDN P Y + E+
Sbjct: 2425 LDHETRPFHHVVLEATDTGLPPLSTTTHLWITVLDVNDNAPKFEQSSYSCWLSEDAERGQ 2484
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D+ R+ Y I+ GN + F+I+ SG
Sbjct: 2485 FVTMVTATDPDIVDHSRLVYGITGGNAQQMFDINSKSG 2522
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y QI E+ +++++A+D D + + +I Y + G+ F ID
Sbjct: 3403 YTTQIDEDVHVGEVVIKVSATDLDSELNGKIRYALVKGDHHQQFAIDSFTGNITVAKPLD 3462
Query: 54 ----------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + +G P+ + + +V +QV +VNDN P+ Y A + E++ +
Sbjct: 3463 REQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFVHEDKKPGWIV 3522
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
QL+ +D DL+P+ +Y I + + F+ID
Sbjct: 3523 CQLSVTDADLEPNGGPFTYDIRNNDDGNAFSID 3555
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----------TGGPDQVYLI 68
+ +VQL A+DGD +++Y I GN + + ID L P + +
Sbjct: 1956 VAVVQLNATDGDSPGQTKLTYSIIGGNEANVYTIDADRGLITVKEPSLGFKSSPHNLAVS 2015
Query: 69 V----YIQVQNVN-------DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
V Y NVN D+ P+YYA IVEN + + + + L ++
Sbjct: 2016 VTDGKYSSQSNVNVRWYRSEDSSLKFQKPIYYATIVENDTKVRFLCAVTVIGAHL--NEH 2073
Query: 118 ISYKISAGNPESYFNIDIGSGSLG 141
+ + IS NP S+F I +G L
Sbjct: 2074 LLFSIS--NPSSHFQIGSTTGILS 2095
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IG----------------S 56
I+ + A D DL + ++ Y +S G+ +S F ID +G S
Sbjct: 761 ILAIRARDRDLGYNGKLVYGVSDGDDDSLFRIDPETGDLNVVGYLDRETRDEYELNVTVS 820
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + + +VNDN P V ++ EN I ++ A D D +
Sbjct: 821 DLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVSENARNGTVIFKINAQDPDQGENG 880
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI Y ++ ++F++D SG+L
Sbjct: 881 RIVYILTTDT--THFSVDKTSGNL 902
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 28/146 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y +I+ENQ I+++ A D D P +SY I + FNI+ ++TG
Sbjct: 2574 YDGRILENQLSGTVIIRVQAIDNDTGPYGEVSYSIPSKKMSKIFNIN---NITGEIISRM 2630
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G Y +V ++V + NDN P L P Y I +
Sbjct: 2631 PLDREEVSLYELNVLACDQGARCGYTLVRVRVSDENDNSPRFLLPEYKTCIHSSLPVNTG 2690
Query: 102 IVQLAASDGDLDPDQRISYKISAGNP 127
+ + A D D +P +I+Y I+ P
Sbjct: 2691 FLTVKAVDDDQEPSGQITYSINDIEP 2716
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIGS------ 56
+Y + EN P+V+L A+D D D R+ Y I + N F +D S
Sbjct: 1520 LYEVNVTENAEIGSPVVRLMATDDD--QDLRLLYGIHSAQHVNSVKSFAVDYQSGVVSVQ 1577
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D + + + V I V + ND+ P + ++ E +
Sbjct: 1578 QPLDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFSSNIVQGRVFETTAV 1637
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A+D D + +SY+I +GN + F+ID G+L
Sbjct: 1638 GTSVLQLLATDKDHGENAAVSYQIISGNIGNVFSIDSKLGTL 1679
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLT 59
+ + A+D D+ R+ Y I+ GN + F+I+ S ++
Sbjct: 2486 VTMVTATDPDIVDHSRLVYGITGGNAQQMFDINSKSGIIIVSNLNKLATVNEHVLNVSVS 2545
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G + V I++ + N + P+ Y +I+ENQ I+++ A D D P +S
Sbjct: 2546 DGVYTSFSRVRIEMVSTNRHNPVFEKLQYDGRILENQLSGTVIIRVQAIDNDTGPYGEVS 2605
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I + FNI+ +G +
Sbjct: 2606 YSIPSKKMSKIFNINNITGEI 2626
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
YYA + E + ++ A+ D + + Y I+ GN + F+I+
Sbjct: 3297 TYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNKFSINSETGVISVFEML 3356
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+DL P +V I + + NDN P+ Y QI E+
Sbjct: 3357 DYERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGEV 3416
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A+D D + + +I Y + G+ F ID +G++
Sbjct: 3417 VIKVSATDLDSELNGKIRYALVKGDHHQQFAIDSFTGNI 3455
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
I+ + SGI+ + + LD + +Y IS ID GS Q+++IV
Sbjct: 3237 IISSDSGIVTLAK------KLDRETCETYNISVKA------IDQGSPPLSSLTQLHVIVL 3284
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+VNDN P+ + YYA + E + ++ A+ D + + Y I+ GN +
Sbjct: 3285 ----DVNDNPPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNK 3340
Query: 131 FNIDIGSG 138
F+I+ +G
Sbjct: 3341 FSINSETG 3348
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 32/138 (23%)
Query: 35 QRISYKISAGNPESYFNIDIGS-DLTGGPDQVY--------------------------- 66
+++ Y I AGN F ID + D GG +Y
Sbjct: 2282 RKLIYSIVAGNTFEEFAIDFNTADDYGGTSLLYAVDNLDYEQVQHYTLTVRATDSVSGVS 2341
Query: 67 --LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
++V I V +VND P Y I E+ S I+++ A+D D D ++ I Y I
Sbjct: 2342 AEVLVSIMVTDVNDCAPEFYQDSYNISISESASFGSFILRVTATDNDTDINRVIKYSIKK 2401
Query: 125 --GNPESYFNIDIGSGSL 140
N YF+ID GS+
Sbjct: 2402 DEENSTDYFHIDEKEGSI 2419
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E P+++L SD D + ++S +I GN F I+ + +
Sbjct: 382 LYEVNIAETAPVNSPVIKLKVSDKDEGKNAQVSLEIVGGNEGGEFRINKRTGMLYTAVVL 441
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I V + NDN P+ + I EN+
Sbjct: 442 DAEHRSSYTLTVSAIDQGNAGSRKQSAAKVKIFVVDANDNDPLFEKYLMEVSINENEPAG 501
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+++A D D + ISY I+ P F+ID +G
Sbjct: 502 TSVVKISARDKDSGENGYISYSIANLKPVP-FDIDHFTG 539
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
3 [Acyrthosiphon pisum]
Length = 4140
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPD-QRISYKISAGNPESYFNID-----------------------IGS 56
+ ++A+D D D R+ Y I G+ YF+ID +
Sbjct: 1082 VTTVSATDADPPGDVSRVGYSIVDGDGLGYFSIDSEGNIRTMVVLDVETKSSYWLTVMAF 1141
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P L VY++V+N+NDNVP+T PVYY ++ E+ PI+QL A D D+ D
Sbjct: 1142 DHATVPMHSRLEVYVEVKNINDNVPLTKAPVYYPRVKEDAPPNTPIIQLEAEDADM-SDT 1200
Query: 117 RISYKISAGNPESYFNIDIGSG 138
RI+YKI+ GNP+S F I +G
Sbjct: 1201 RITYKITTGNPQSLFAISANTG 1222
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++ E+ PI+QL A D D+ D RI+YKI+ GNP+S F I + L
Sbjct: 1167 LTKAPVYYPRVKEDAPPNTPIIQLEAEDADM-SDTRITYKITTGNPQSLFAISANTGLIT 1225
Query: 59 TGGPD-----------QVYLI------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G +V +I V I V++VNDN P L Y +I E
Sbjct: 1226 TTGRKLDRETESEHILEVTVIDDGVPVLSSTTSVVIAVEDVNDNAPEMLKKAYRFKIPET 1285
Query: 96 QSGILPIVQ 104
Q P+VQ
Sbjct: 1286 QPVQEPLVQ 1294
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 10 QIVENQSGILPIVQ-LAASDGDLDPDQRISYKISAGN--------------PESYFNIDI 54
++ + SG+ I++ L DGD D RI +G P+ Y N+ +
Sbjct: 290 KVTDRDSGVNGIIRSLEIVDGDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGY-NLSL 348
Query: 55 GSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +G P++ Y ++I++ +VNDN P+ +Y I E P+++L SD D
Sbjct: 349 RAVDSGTPERDTYRSIHIELADVNDNAPVFERELYEVNIAETAPVNSPVIKLKVSDKDEG 408
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++S +I GN F I+ +G L
Sbjct: 409 KNAQVSLEIVGGNEGGEFRINKRTGML 435
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDI---------- 54
Y I E+ S I+++ A+D D D ++ I Y I N YF+ID
Sbjct: 2358 YNISISESASFGSFILRVTATDNDTDINRVIKYSIKKDEENSTDYFHIDEKEGSIYLKQS 2417
Query: 55 --------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D P ++I V +VNDN P Y + E+
Sbjct: 2418 LDHETRPFHHVVLEATDTGLPPLSTTTHLWITVLDVNDNAPKFEQSSYSCWLSEDAERGQ 2477
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D+ R+ Y I+ GN + F+I+ SG
Sbjct: 2478 FVTMVTATDPDIVDHSRLVYGITGGNAQQMFDINSKSG 2515
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y QI E+ +++++A+D D + + +I Y + G+ F ID
Sbjct: 3396 YTTQIDEDVHVGEVVIKVSATDLDSELNGKIRYALVKGDHHQQFAIDSFTGNITVAKPLD 3455
Query: 54 ----------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + +G P+ + + +V +QV +VNDN P+ Y A + E++ +
Sbjct: 3456 REQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFVHEDKKPGWIV 3515
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
QL+ +D DL+P+ +Y I + + F+ID
Sbjct: 3516 CQLSVTDADLEPNGGPFTYDIRNNDDGNAFSID 3548
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----------TGGPDQVYLI 68
+ +VQL A+DGD +++Y I GN + + ID L P + +
Sbjct: 1956 VAVVQLNATDGDSPGQTKLTYSIIGGNEANVYTIDADRGLITVKEPSLGFKSSPHNLAVS 2015
Query: 69 V----YIQVQNVN-------DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
V Y NVN D+ P+YYA IVEN + + + + L ++
Sbjct: 2016 VTDGKYSSQSNVNVRWYRSEDSSLKFQKPIYYATIVENDTKVRFLCAVTVIGAHL--NEH 2073
Query: 118 ISYKISAGNPESYFNIDIGSGSLG 141
+ + IS NP S+F I +G L
Sbjct: 2074 LLFSIS--NPSSHFQIGSTTGILS 2095
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IG----------------S 56
I+ + A D DL + ++ Y +S G+ +S F ID +G S
Sbjct: 761 ILAIRARDRDLGYNGKLVYGVSDGDDDSLFRIDPETGDLNVVGYLDRETRDEYELNVTVS 820
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + + +VNDN P V ++ EN I ++ A D D +
Sbjct: 821 DLGKPQHTTWKLLKVIILDVNDNAPKVDKRVSSFRVSENARNGTVIFKINAQDPDQGENG 880
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI Y ++ ++F++D SG+L
Sbjct: 881 RIVYILTTDT--THFSVDKTSGNL 902
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 28/146 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y +I+ENQ I+++ A D D P +SY I + FNI+ ++TG
Sbjct: 2567 YDGRILENQLSGTVIIRVQAIDNDTGPYGEVSYSIPSKKMSKIFNIN---NITGEIISRM 2623
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G Y +V ++V + NDN P L P Y I +
Sbjct: 2624 PLDREEVSLYELNVLACDQGARCGYTLVRVRVSDENDNSPRFLLPEYKTCIHSSLPVNTG 2683
Query: 102 IVQLAASDGDLDPDQRISYKISAGNP 127
+ + A D D +P +I+Y I+ P
Sbjct: 2684 FLTVKAVDDDQEPSGQITYSINDIEP 2709
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIGS------ 56
+Y + EN P+V+L A+D D D R+ Y I + N F +D S
Sbjct: 1520 LYEVNVTENAEIGSPVVRLMATDDD--QDLRLLYGIHSAQHVNSVKSFAVDYQSGVVSVQ 1577
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D + + + V I V + ND+ P + ++ E +
Sbjct: 1578 QPLDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFSSNIVQGRVFETTAV 1637
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A+D D + +SY+I +GN + F+ID G+L
Sbjct: 1638 GTSVLQLLATDKDHGENAAVSYQIISGNIGNVFSIDSKLGTL 1679
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 35 QRISYKISAGNPESYFNIDIGSDLTGGPDQV-----------------------YLIVYI 71
+++ Y I AGN F ID + L D + ++V I
Sbjct: 2282 RKLIYSIVAGNTFEEFAIDFNTGLLYAVDNLDYEQVQHYTLTVRATDSVSGVSAEVLVSI 2341
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPES 129
V +VND P Y I E+ S I+++ A+D D D ++ I Y I N
Sbjct: 2342 MVTDVNDCAPEFYQDSYNISISESASFGSFILRVTATDNDTDINRVIKYSIKKDEENSTD 2401
Query: 130 YFNIDIGSGSL 140
YF+ID GS+
Sbjct: 2402 YFHIDEKEGSI 2412
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLT 59
+ + A+D D+ R+ Y I+ GN + F+I+ S ++
Sbjct: 2479 VTMVTATDPDIVDHSRLVYGITGGNAQQMFDINSKSGIIIVSNLNKLATVNEHVLNVSVS 2538
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G + V I++ + N + P+ Y +I+ENQ I+++ A D D P +S
Sbjct: 2539 DGVYTSFSRVRIEMVSTNRHNPVFEKLQYDGRILENQLSGTVIIRVQAIDNDTGPYGEVS 2598
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I + FNI+ +G +
Sbjct: 2599 YSIPSKKMSKIFNINNITGEI 2619
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
YYA + E + ++ A+ D + + Y I+ GN + F+I+
Sbjct: 3290 TYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNKFSINSETGVISVFEML 3349
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+DL P +V I + + NDN P+ Y QI E+
Sbjct: 3350 DYERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGEV 3409
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A+D D + + +I Y + G+ F ID +G++
Sbjct: 3410 VIKVSATDLDSELNGKIRYALVKGDHHQQFAIDSFTGNI 3448
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
I+ + SGI+ + + LD + +Y IS ID GS Q+++IV
Sbjct: 3230 IISSDSGIVTLAK------KLDRETCETYNISVKA------IDQGSPPLSSLTQLHVIVL 3277
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+VNDN P+ + YYA + E + ++ A+ D + + Y I+ GN +
Sbjct: 3278 ----DVNDNPPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNK 3333
Query: 131 FNIDIGSG 138
F+I+ +G
Sbjct: 3334 FSINSETG 3341
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E P+++L SD D + ++S +I GN F I+ + +
Sbjct: 382 LYEVNIAETAPVNSPVIKLKVSDKDEGKNAQVSLEIVGGNEGGEFRINKRTGMLYTAVVL 441
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I V + NDN P+ + I EN+
Sbjct: 442 DAEHRSSYTLTVSAIDQGNAGSRKQSAAKVKIFVVDANDNDPLFEKYLMEVSINENEPAG 501
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+++A D D + ISY I+ P F+ID +G
Sbjct: 502 TSVVKISARDKDSGENGYISYSIANLKPVP-FDIDHFTG 539
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+++++A D D+ D I Y I G+ F ID + + D++
Sbjct: 1053 VMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAS 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1173 KLTYKITSGNPQGFFSINSKTG 1194
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +I+EN + +VQ+ A D D D +++YKI++GNP+ +F+I+ + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGFFSINSKTGLITT 1198
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V +++ + NDN P L Y ++ E +
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2185 PFYSAEIPENAQLHSPVVHVQANSPE---GLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYATTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F++D G+G
Sbjct: 2300 TSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTG 2340
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
Q+ ENQ ++ + A+D D + ++ Y +S GN +S F +D+
Sbjct: 725 QVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSCFIMDMETGMLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ + Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVRYSILTDTDK--FSIDSVTG 875
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++Q+ A+ D++ + I+Y I +GN F+ID I +L Y +
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEAT 3308
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3309 DGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3369 HIHYAIIDGNQGSPFTIDPARGEV 3392
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGPDQ 64
YA + S I +VQ+ A+D D +P++ ISY + + +S+ F++D G TG
Sbjct: 2288 YATTLSEASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSG---TGLISL 2344
Query: 65 VYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVENQS 97
V + Y Q + +ND+ P+ +Y A+I E+ +
Sbjct: 2345 VRTLDYEQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLYEARISEHAA 2404
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2405 HGHFVTCVRAYDADSSDADKLEYSILSGNDHKNFVIDGKTG 2445
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP----DQV--YLIVY--- 70
I+Q++A+D D+ + I+Y + E + N D G T P +Q +L+V
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAAYHLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCQASVVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 IVISVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAI 3287
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 17 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------- 53
G++ IV +D + + +++++Y I+ G+P F I+
Sbjct: 2935 GVIAIVSTTDADSE-EINRQVTYYITGGDPLGQFAIENIQNEWKVYVKKPLDREERDSYL 2993
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ T G IV ++V + NDN P+ +Y I E+ I+Q++A+D D+
Sbjct: 2994 LTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPEDAFPGKLIMQVSATDADIR 3053
Query: 114 PDQRISYKISAGNPESY-FNIDIG 136
+ I+Y + E + N D G
Sbjct: 3054 SNAEITYTLFGPGAEKFKLNPDTG 3077
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+++++A D D+ D I Y I G+ F ID + + D++
Sbjct: 1053 VMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAS 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1173 KLTYKITSGNPQGFFSINSKTG 1194
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +I+EN + +VQ+ A D D D +++YKI++GNP+ +F+I+ + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGFFSINSKTGLITT 1198
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V +++ + NDN P L Y ++ E +
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2185 PFYSAEIPENAQLHSPVVHVQANSPE---GLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYATTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F++D G+G
Sbjct: 2300 TSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTG 2340
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
Q+ ENQ ++ + A+D D + ++ Y +S GN +S F +D+
Sbjct: 725 QVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSCFIMDMETGMLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ + Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVRYSILTDTDK--FSIDSMTG 875
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++Q+ A+ D++ + I+Y I +GN F+ID I +L Y +
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEAT 3308
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3369 HIHYAIIDGNQGSPFTIDPARGEV 3392
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGPDQ 64
YA + S I +VQ+ A+D D +P++ ISY + + +S+ F++D G TG
Sbjct: 2288 YATTLSEASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSG---TGLISL 2344
Query: 65 VYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVENQS 97
V + Y Q + +ND+ P+ +Y A+I E+ +
Sbjct: 2345 VRTLDYEQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLYEARISEHAA 2404
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2405 HGHFVTCVRAYDADSSDADKLEYSILSGNDHKNFVIDGKTG 2445
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP----DQV--YLIVY--- 70
I+Q++A+D D+ + I+Y + E + N D G T P +Q +L+V
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAAYHLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCQASVVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 IVISVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAI 3287
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 17 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------- 53
G++ IV +D + + +++++Y I+ G+P F I+
Sbjct: 2935 GVIAIVSTTDADSE-EINRQVTYYITGGDPLGQFAIENIQNEWKVYVKKPLDREERDSYL 2993
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ T G IV ++V + NDN P+ +Y I E+ I+Q++A+D D+
Sbjct: 2994 LTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPEDAFPGKLIMQVSATDADIR 3053
Query: 114 PDQRISYKISAGNPESY-FNIDIG 136
+ I+Y + E + N D G
Sbjct: 3054 SNAEITYTLFGPGAEKFKLNPDTG 3077
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+++++A D D+ D I Y I G+ F ID + + D++
Sbjct: 1053 VMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAS 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1173 KLTYKITSGNPQGFFSINSKTG 1194
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +I+EN + +VQ+ A D D D +++YKI++GNP+ +F+I+ + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGFFSINSKTGLITT 1198
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P ++ + V +++ + NDN P L Y ++ E +
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKLTITRVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2185 PFYSAEIPENAQLHSPVVHVQANSPE---GLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYATTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F++D G+G
Sbjct: 2300 TSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTG 2340
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
Q+ ENQ ++ + A+D D + ++ Y +S GN +S F +D+
Sbjct: 725 QVKENQPVGSSLLVMNATDLDTGFNGKLVYAVSGGNEDSCFIMDMETGMLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ + Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVRYSILTDTDK--FSIDSVTG 875
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++Q+ A+ D++ + I+Y I +GN F+ID I +L Y +
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEAT 3308
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3369 HIHYAIIDGNQGSPFTIDPARGEV 3392
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGPDQ 64
YA + S I +VQ+ A+D D +P++ ISY + + +S+ F++D G TG
Sbjct: 2288 YATTLSEASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSG---TGLISL 2344
Query: 65 VYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVENQS 97
V + Y Q + +ND+ P+ +Y A+I E+ +
Sbjct: 2345 VRTLDYEQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLYEARISEHAA 2404
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2405 HGHFVTCVRAYDADSSDADKLEYSILSGNDHKNFVIDGKTG 2445
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP----DQV--YLIVY--- 70
I+Q++A+D D+ + I+Y + E + N D G T P +Q +L+V
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAAYHLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCQASVVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 IVISVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAI 3287
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 17 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------- 53
G++ IV +D + + +++++Y I+ G+P F I+
Sbjct: 2935 GVIAIVSTTDADSE-EINRQVTYYITGGDPLGQFAIENIQNEWKVYVKKPLDREERDSYL 2993
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ T G IV ++V + NDN P+ +Y I E+ I+Q++A+D D+
Sbjct: 2994 LTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPEDAFPGKLIMQVSATDADIR 3053
Query: 114 PDQRISYKISAGNPESY-FNIDIG 136
+ I+Y + E + N D G
Sbjct: 3054 SNAEITYTLFGPGAEKFKLNPDTG 3077
>gi|348565657|ref|XP_003468619.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Cavia
porcellus]
Length = 4527
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1023 VKENSRIGTSVLQVTAQDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADILDRETT 1082
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY L VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1083 GSYWLTVYATDRGVVPLYSTLEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1142
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1143 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1118 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1177
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1178 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPER 1237
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1238 DRKKRGEPIYRAFAFDRDEGPNSEISYSIIDGNDDGKFFIDPKTG 1282
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I +++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINIEDANDNSPIFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKISAGNPESYFN 132
++Y + E N
Sbjct: 865 EVTYSVLTDTQEFAIN 880
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1523 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1582
Query: 129 SYFNID 134
+ F I+
Sbjct: 1583 TTFKIE 1588
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL------------------- 58
P++Q+ +SD D ++ + Y+I N YF+ID S L
Sbjct: 2276 PVLQVVSSDIDSGNNKMVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKV 2335
Query: 59 ----TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
G P ++V+I + ++NDN P+ +Y + + E + + ASD D
Sbjct: 2336 RATDNGFPSLSNEVLVHIHISDINDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSS 2395
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN + F +D SG
Sbjct: 2396 DFDRLEYSILSGNDRTSFLMDSKSG 2420
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 30/143 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESY---FNIDIGS-------DLTGGPDQVY--- 66
+ Q+ A+D D + +++Y + S +PE FNID + DL D +
Sbjct: 2804 LTQVRATDMDWGANGQVTYSLHSDSHPEKVMEAFNIDSNTGWISTLKDLDHETDPAFSFS 2863
Query: 67 ---------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+V ++V ++NDN P+ VY + E+ + L+ D D
Sbjct: 2864 VVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRD 2923
Query: 112 L-DPDQRISYKISAGNPESYFNI 133
D ++++SY I+ GNP F +
Sbjct: 2924 TSDVNRQVSYHITGGNPRGRFAL 2946
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3212 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRIN---PKTGGISVSE 3268
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY I E+
Sbjct: 3269 ALDYESCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNPPKFSQDVYSTVISEDALVG 3328
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3329 DSVILLIAEDVDSQPNGQIRFSIVSGDRDNEFAVD 3363
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
Y A++ EN + ++ + A+DGD +ISY I + F ID
Sbjct: 2471 TYVAEVRENAAAGTKVIHIRATDGDPGTYGQISYAIINDFAKDRFLIDSNGQVITTERLD 2530
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P L Y A + + +
Sbjct: 2531 RENPLEGDVSIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASVRADVGRGHLV 2590
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2591 TQVQAMDPDDGANSRITYSL 2610
>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
Length = 4472
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 24/155 (15%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------ 61
+ ++E+ S ++++AA D D D + Y I G+ F I+ S +
Sbjct: 1039 WGTVLEDASVGTSVLKVAAHDEDSGRDGEVRYSIRGGSGLGVFTINEESGIITTQEILDR 1098
Query: 62 ------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
P ++ VYI+VQ+VNDN P+T +PVY+ + EN + ++
Sbjct: 1099 ETNNHYWLTVYATDQGIVPLSSFVEVYIEVQDVNDNAPLTTEPVYFPSVSENSPKGVSVI 1158
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q+ A D D + + +SYKIS+GNP+ +F ID +G
Sbjct: 1159 QIQAFDLDSESSENLSYKISSGNPQGFFAIDFQTG 1193
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +PVY+ + EN + ++Q+ A D D + + +SYKIS+GNP+ +F ID + L
Sbjct: 1137 LTTEPVYFPSVSENSPKGVSVIQIQAFDLDSESSENLSYKISSGNPQGFFAIDFQTGLVT 1196
Query: 60 -----------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P + ++ V + V + NDN P L+ ++ ++VE
Sbjct: 1197 TTSRKLDREKQAEHLLEITVSDDGSPSKSTVVHVIVNVLDENDNSPQFLEKIFKIRLVER 1256
Query: 96 QSGI--LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A D D P ISY I G + F I+ +G
Sbjct: 1257 LEAVEWEPIYRVIAYDRDESPFSDISYAIEEGEEQGKFFIEPTTG 1301
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y +I+EN I+Q+ A+ R Y IS GNP S F+I S
Sbjct: 2178 PFYKIEILENVLVGTSILQVVANQS---AGPRTVYSISGGNPFSQFDIHFNSGLIKVIQP 2234
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V+ V I +++VNDN P VY I E+
Sbjct: 2235 LDYEAHPAYRLSIQATDSLTGANSDVF--VDIILEDVNDNAPKFEAAVYSISISESTVIG 2292
Query: 100 LPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
++Q+ A D D + + YK+ G+ +F ID +G
Sbjct: 2293 TSVLQVVAMDPDAQSNAILFYKLHERDGSTSDHFRIDAETG 2333
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 28/163 (17%)
Query: 4 DPVYYAQIVENQSG---ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
+ V+ + E++S ++ I+ SD D + ++R + I+ G+P+ F++
Sbjct: 2910 EAVFKGAVREDESTPGTVVTILSYVDSDSD-EVNRRFNCFITGGDPQGLFDVKHTDGVWV 2968
Query: 54 --IGSDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ L YL+ V I V + NDN P+ VY + E+
Sbjct: 2969 VAVSKTLDREERDFYLLNITATDGTFVAKAAVEITVLDANDNSPVCEKDVYAQAVPEDVL 3028
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q++A+D D+ + I+Y++S ES F ID +G++
Sbjct: 3029 IGKHILQVSATDADIQSNAEITYQLSGSGAES-FTIDSKTGAV 3070
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP------DQVYLIVY-- 70
++++ A+ D +I+Y S+GN + F ID G P Q YL V
Sbjct: 3240 LLKVFAASKDRQMTSQITYSFSSGNEQGAFRIDSQTGDIFVMEPLDYEESSQHYLTVKAT 3299
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I +Q++NDN P+ +Y A + E+ ++ + A+D D +
Sbjct: 3300 VGGKQSLSDMATVSIHLQDINDNSPVFSQKIYSAVVSEDTRLASTVLTVLANDLDGPLNN 3359
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+I Y I N F +D SG L
Sbjct: 3360 QIRYSIEESNQSCPFIMDAVSGEL 3383
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++ NDN P Y A++ E + ++Q+ A D D + I Y I +GN
Sbjct: 1542 VIINVEDSNDNPPWFTSSQYAARVFETAAIGSSVLQVTALDKDKSFNAEILYSIDSGNHG 1601
Query: 129 SYFNIDIGSG 138
+ F ID SG
Sbjct: 1602 TSFIIDQSSG 1611
>gi|194748040|ref|XP_001956457.1| GF24582 [Drosophila ananassae]
gi|190623739|gb|EDV39263.1| GF24582 [Drosophila ananassae]
Length = 1581
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY +I EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 229 DFVYEGRIKENKPKGTFVMNVTARDLDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 288
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E +
Sbjct: 289 QLDAETKNFYWLTLCAQDSAIVPLSNCVEVYIQVENENDNIPLTSKPVYYVNVTEASAEN 348
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I++L A D D+DP Q ISY I +GN YF ID +G
Sbjct: 349 IEIIKLHAVDPDIDPTQTISYNIVSGNLVGYFEIDSKTG 387
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + + I++L A D D+DP Q ISY I +GN YF ID +
Sbjct: 331 LTSKPVYYVNVTEASAENIEIIKLHAVDPDIDPTQTISYNIVSGNLVGYFEIDSKTGVIR 390
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 391 TTERKLDRENQAEHILEVAISDNGSPMLSSTSRIVVTVLDINDNSPEFDLRVYKVQVPTS 450
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 451 ATVNQSIFQVHAIDSDDGDNGRITYSIKSGKGKNKFRIDSQRGHI 495
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDL----- 58
+ EN + Q+ A D D D ++ Y IS+GN ++ F NI + L
Sbjct: 555 LTENDKPGFLVTQILAVDDDND---QLWYNISSGNEDNSFYIGQDNGNILLSKHLDYETE 611
Query: 59 ---------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
T G + + IQV ++NDN P VY+ I EN I+QL A+D
Sbjct: 612 KSYNLTISVTDGTFTSFTNLLIQVIDINDNTPKFAKDVYHVNISENIEEESVIMQLHATD 671
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 672 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 703
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQ 116
L + + VYI V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D +
Sbjct: 1253 LNANVRRAFTSVYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENG 1311
Query: 117 RISYKISAGNPESYFNIDIGSGSLG 141
+ Y++ GN E F +D +G L
Sbjct: 1312 EVRYELKKGNGE-LFRLDRKTGELS 1335
>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
Length = 4555
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV----- 65
+ EN ++Q+ A D D D I Y I G+ FNID S + D +
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRETT 1110
Query: 66 --YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
Y + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
+ Y +
Sbjct: 864 EVMYSV 869
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ + PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2188 PFYTASINEDITMNTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2244
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V ++NDN P+ P Y + E+
Sbjct: 2245 LDYEVTSVYKLTVRASDALTGARAEV--TVDLLVDDINDNPPVFDQPTYNTTLSESSLIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D ++ + Y+I N YF+ID SG
Sbjct: 2303 TPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSG 2343
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2409 GHFVTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVL 2450
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3240 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPK---TGGISVLE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3391
>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
Length = 4539
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV----- 65
+ EN ++Q+ A D D D I Y I G+ FNID S + D +
Sbjct: 1035 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRETT 1094
Query: 66 --YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
Y + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1095 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1154
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1155 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1186
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1130 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1189
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1190 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQIKLPER 1249
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1250 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1294
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 728 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 787
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 788 DLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 847
Query: 117 RISYKI 122
+ Y +
Sbjct: 848 EVMYSV 853
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ + PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2172 PFYTASINEDITMNTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2228
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V ++NDN P+ P Y + E+
Sbjct: 2229 LDYEVTSVYKLTVRASDALTGARAEV--TVDLLVDDINDNPPVFDQPTYNTTLSESSLIG 2286
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D ++ + Y+I N YF+ID SG
Sbjct: 2287 TPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSG 2327
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D ++ + Y+I N YF+ID S L
Sbjct: 2273 PTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTA 2332
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2333 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2392
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2393 GHFVTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVL 2434
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1535 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1594
Query: 129 SYFNID 134
+ F I+
Sbjct: 1595 NTFKIE 1600
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3224 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPK---TGGISVLE 3280
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3281 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3340
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3341 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3375
>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
Length = 4551
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV----- 65
+ EN ++Q+ A D D D I Y I G+ FNID S + D +
Sbjct: 1047 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRETT 1106
Query: 66 --YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
Y + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1107 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1166
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1167 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1198
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1142 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1201
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1202 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQIKLPER 1261
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1262 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1306
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 740 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 799
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 800 DLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 859
Query: 117 RISYKI 122
+ Y +
Sbjct: 860 EVMYSV 865
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ + PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2184 PFYTASINEDITMNTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2240
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V ++NDN P+ P Y + E+
Sbjct: 2241 LDYEVTSVYKLTVRASDALTGARAEV--TVDLLVDDINDNPPVFDQPTYNTTLSESSLIG 2298
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D ++ + Y+I N YF+ID SG
Sbjct: 2299 TPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSG 2339
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D ++ + Y+I N YF+ID S L
Sbjct: 2285 PTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTA 2344
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2345 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2404
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2405 GHFVTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVL 2446
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1547 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1606
Query: 129 SYFNID 134
+ F I+
Sbjct: 1607 NTFKIE 1612
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3236 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPK---TGGISVLE 3292
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3293 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3352
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3353 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3387
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+++++A D D D I Y I G+ F ID + + D++
Sbjct: 1053 VMKVSARDEDTGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAS 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1173 KLTYKITSGNPQGFFSINSKTG 1194
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D D +++YKI++GNP+ +F+I+ + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGFFSINSKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TARKLDREQQDEHILEVTVTDNGSPPKSTVTRVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2185 PFYSAEIPESAQMHSPVVHVQANSPE---GLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFESHPAYKLSIQATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID G+G
Sbjct: 2300 TSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHIDSGTG 2340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
Q+ ENQ ++ + A+D D + ++ Y IS GN +S F +D+
Sbjct: 725 QVKENQPVGSSLLVMNATDLDTGFNGKLVYAISGGNEDSCFMMDMETGMFKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDRYTLNITVSDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ + Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVRYSILTDTDK--FSIDSMTG 875
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 32/147 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGPDQVYLIVYIQVQN--- 75
+VQ+ A+D D +P++ ISY + + +S+ F+ID G TG V + Y Q +
Sbjct: 2302 VVQVRATDADSEPNRGISYHMVGNHSKSHDHFHIDSG---TGLISLVRTLDYEQFRQHQI 2358
Query: 76 ------------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+ND+ P+ +Y A+I E+ + + + A D D
Sbjct: 2359 SVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLYEARISEHAAHGHFVTCVRACDAD 2418
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F ID +G
Sbjct: 2419 SSDTDKLEYSILSGNDHKNFVIDGKTG 2445
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++Q+ A+ D++ + I+Y I +GN F+ID I +L Y +
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEAT 3308
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVVSEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3369 HIHYAIIDGNQGSPFTIDPARGEV 3392
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 35/167 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-- 60
L Y+ ++ E++ I+Q+ A+D DL P+ + Y I + F+ID +TG
Sbjct: 823 LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVRYSILTDTDK--FSID---SMTGVV 877
Query: 61 -------------------GPDQVY--------LIVYIQVQNVNDNVPMTLDPVYYAQIV 93
DQ +I+ + +++VNDN P + P Y ++
Sbjct: 878 RILNPLDREEQHVHYLKVEARDQAREEPQLLSTVILKVSLEDVNDNPPKFIPPNYRVKVR 937
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E+ I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 938 EDLPEGTIIMWLEAHDPDLGQSSQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP----DQV--YLIVY--- 70
I+Q++A+D D+ + I+Y + E + N D G T P +Q +L+V
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQATYHLLVKAAD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCQASIVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 IVISVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAI 3287
>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
Length = 4555
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADILDRETT 1110
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ S PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2188 PFYTASINEDISINTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2244
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V +VNDN P+ P Y + E+
Sbjct: 2245 LDYEVMSVYKLTVRASDALTGARAEV--TVDLLVDDVNDNPPVFDQPTYNTTLSESSLIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D + + Y+I N YF+ID SG
Sbjct: 2303 TPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSG 2343
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D + + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVL 2450
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3240 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPK---TGGISVLE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3391
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D + ++++SY I+ GN
Sbjct: 2908 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
>gi|16876883|gb|AAH16722.1| FAT3 protein, partial [Homo sapiens]
Length = 230
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 24/154 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 28 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 87
Query: 64 -----QVYLI------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 88 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 147
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D +++++Y+I++GNP+++F I+I +GS
Sbjct: 148 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTGSC 181
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 40/56 (71%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I +
Sbjct: 123 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKT 178
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1052 VKENSRIGTSVLQVTAQDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F ++I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAMNIKTG 1203
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F ++I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAMNIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNNPVFLQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDIDRLDYSILSGNDRTSFLMDSKSG 2449
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYEVCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNAPQFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ +S F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVSGDRDSEFAVD 3392
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + + +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 2264 LTGARAEV--TVDLLINDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSASG 2344
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
>gi|410972449|ref|XP_003992672.1| PREDICTED: protocadherin Fat 3 isoform 2 [Felis catus]
Length = 4589
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+AA D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVAAQDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINTKTG 1203
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINTKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLLPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSASGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDGKSG 2449
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKL 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSASG 2344
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y+I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYQIRSGNEQGRFRINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKKFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ + F ++
Sbjct: 3358 DSVILLIAEDADSPPNGQIHFSIVNGDRDDEFAVE 3392
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A + EN + + ++ A D D+ ++++ Y + A + + +F+ID S +
Sbjct: 3136 YNACVYENTATKALLTRVQAVDPDVGINRKVVYSL-ADSADGFFSIDGSSGIIILEQPLD 3194
Query: 60 ---------------GGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
P Q V I V ++NDN P+ Y + E+ S
Sbjct: 3195 REQQPSYNISVQATDQSPGQALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQ 3254
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y+I +GN + F I+ +G +
Sbjct: 3255 VLAVFATSKDIGTNAEITYQIRSGNEQGRFRINPKTGGI 3293
>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
Length = 4557
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+AA D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVAAQDDDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINTKTG 1203
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINTKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLLPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSENNKLVHYQIVQDTYNSTDYFHIDSASGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCILKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + I+Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAILQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 2264 LTGARAEV--TVDMLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKL 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSASG 2344
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A E+ S
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCEQVAYTALFPEDISSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSLYGSGNDE--FFLDPESGEL 3085
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGRFRINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +L+V I V +VNDN P Y A I E+
Sbjct: 3298 VLDYELCKKFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F ++
Sbjct: 3358 DSVILLVAEDADSQPNGQIRFSIVNGDRDNEFAVE 3392
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
Y A++ EN + ++ + A+DGD +ISY I + F ID
Sbjct: 2500 TYVAEVRENTAAGTKVIHVRATDGDPGTYGQISYTIINDFAKDRFLIDSNGQVITTERLD 2559
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P + Y A + + +
Sbjct: 2560 RENPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLV 2619
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2620 TQVQAVDPDDGANSRITYSL 2639
>gi|410972447|ref|XP_003992671.1| PREDICTED: protocadherin Fat 3 isoform 1 [Felis catus]
Length = 4557
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+AA D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVAAQDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINTKTG 1203
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINTKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLLPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSASGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDGKSG 2449
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKL 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSASG 2344
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y+I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYQIRSGNEQGRFRIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKKFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ + F ++
Sbjct: 3358 DSVILLIAEDADSPPNGQIHFSIVNGDRDDEFAVE 3392
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A + EN + + ++ A D D+ ++++ Y + A + + +F+ID S +
Sbjct: 3136 YNACVYENTATKALLTRVQAVDPDVGINRKVVYSL-ADSADGFFSIDGSSGIIILEQPLD 3194
Query: 60 ---------------GGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
P Q V I V ++NDN P+ Y + E+ S
Sbjct: 3195 REQQPSYNISVQATDQSPGQALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQ 3254
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y+I +GN + F I+ +G +
Sbjct: 3255 VLAVFATSKDIGTNAEITYQIRSGNEQGRFRINPKTGGI 3293
>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
Length = 4557
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDISVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFVINIKTG 1203
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL P+
Sbjct: 805 DLGKPQKSSWRLLTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGPNG 864
Query: 117 RISYKI 122
+ Y +
Sbjct: 865 EVMYSV 870
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2189 PFYTTSVNEDIEMHTPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V +VNDN P+ P Y A + E
Sbjct: 2246 LDYEVTPVFKLTVRASDALTGARAEV--TVDLLVNDVNDNPPIFDQPTYNATLSEASLIG 2303
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ ASD D + ++ + Y+I N YF+ID SG
Sbjct: 2304 TPVLQVVASDADSENNKIVQYQIVQDTYNSTDYFHIDSTSG 2344
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG- 61
P Y A + E P++Q+ ASD D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNATLSEASLIGTPVLQVVASDADSENNKIVQYQIVQDTYNSTDYFHIDSTSGLILTA 2349
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P ++V I V ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQQSTLKVRATDNGFPPMSSEVLVNIYVTDMNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ + ++ + A+ D+ + I+Y I +GN F I++ TGG
Sbjct: 3241 YLVTVPEDTTPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFKINLK---TGGISVIE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
YL+V I + +VNDN P VY A I E+ S
Sbjct: 3298 ALDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3358 DSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVD 3392
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y I EN + + ++ A+D DL ++++ Y + A + YF++D S +
Sbjct: 3136 YNTCIYENTATKALLTRVQATDPDLGINRKVVYSL-ADSAGGYFSVDSSSGIIILEQPLD 3194
Query: 59 ----------TGGPDQVYL-------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ L V I V ++NDN P+ Y + E+ +
Sbjct: 3195 RELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTTPGTE 3254
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN F I++ +G +
Sbjct: 3255 VLAVFATSKDIGTNAEITYLIRSGNERGKFKINLKTGGI 3293
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVTALDKDRGENAELLYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A I E+ S ++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3345 VYSAVISEDASIGDSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVDPVLGLVKVKKKL 3404
Query: 54 -----------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + +G P + V I + +VNDN P+ Y A I EN+
Sbjct: 3405 DRERVSGYSLLIQATDSGVPAMSSTVTVNIDISDVNDNGPVFTPANYTAVIQENKPVGTS 3464
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D ++ I AGN E F +D
Sbjct: 3465 ILQLMVTDRDSFHNGPPFTFTILAGNEEEEFVLD 3498
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ P+ I Y + +GN + + + + G T
Sbjct: 3048 ILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKTLALLDREKIPVYNLIARATD 3107
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + +++VNDN P+ Y I EN + + ++ A+D DL ++++
Sbjct: 3108 GGGRFCQSDIRLILEDVNDNPPIFSSDHYNTCIYENTATKALLTRVQATDPDLGINRKVV 3167
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + YF++D SG
Sbjct: 3168 YSL-ADSAGGYFSVDSSSG 3185
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 24 LAASDGDL-DPDQRISYKISAGNPESYF---------NIDIGSDLTGGPDQVYLI----- 68
L+ D D D ++++SY I+ GNP F + + L +Y +
Sbjct: 2946 LSTWDEDTSDINRQVSYHITGGNPRGRFALGLVQNEWKVYVKRPLDREEQDIYFLNITAT 3005
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
V + V +VNDN P+ Y A E+ I++++A D D+ P+ I
Sbjct: 3006 DGLFVTQAMVEVTVTDVNDNSPVCDQVAYTALFPEDIPSNKIILKISAKDADIGPNGDIR 3065
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + +F +D SG L
Sbjct: 3066 YSLYGSGNNKFF-LDPESGEL 3085
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+++++A D D D I Y I G+ F ID + + D++
Sbjct: 1053 VMKVSAHDEDTGRDGEIHYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTIYAS 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFVEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I +G
Sbjct: 1173 KLTYKITSGNPQGFFSISPKTG 1194
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D D +++YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYKITSGNPQGFFSISPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERSSKREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIPENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ + Y A + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIVVEDINDNPPVFVQQSYAATLSEATVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2340
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++ND+ P+ PVY A+I E+ + + + A D D
Sbjct: 2362 AVDGGMPPLSSEVIVTVDVTDLNDHSPLFDQPVYEAKISEHAAHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F +D +G
Sbjct: 2422 IDKLEYSILSGNDHKNFVVDGRTG 2445
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN+ ++ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 725 EVKENRPVGSSVIFMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGVLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+ +
Sbjct: 785 TDRYSLNITVSDLGLPQKAAWRLLEIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIPV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ + Y I
Sbjct: 845 EATDKDLGPNGHVMYSI 861
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSID---SKTGAIFIIENLDYESSHEYYLTV 3305
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y A I E+ ++ + A D D
Sbjct: 3306 EATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMADDADGP 3365
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN S F ID G +
Sbjct: 3366 SNSHIHYSIIDGNQGSPFTIDPARGEV 3392
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDVLIGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAI 3287
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + N D G T P D+ Y
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQATYNLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCQANIVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFVINIKTG 1203
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGRPQKSSWRLLTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2189 PFYTTSVNEDIEMHTPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + + +VNDN P+ P Y A + E
Sbjct: 2246 LDYEETPVFKLTVRASDALTGARAEV--TVDLLINDVNDNPPIFNQPAYNATLSEASLIG 2303
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ ASD D + ++ + Y+I N YF+ID SG
Sbjct: 2304 TPVLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSG 2344
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG- 61
P Y A + E P++Q+ ASD D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PAYNATLSEASLIGTPVLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLILTA 2349
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P ++V I V ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQQSTLKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVTALDKDRGENAELLYSIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMIN---PKTGGISVID 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
YL+V I + +VNDN P VY A I E+ S
Sbjct: 3298 SLDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3358 DSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVD 3392
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D DL ++++ Y + A + YF++D S +
Sbjct: 3136 YNACVYENTATKALLTRVQATDPDLGINRKVVYSL-ADSAGGYFSVDSSSGIIILEQPLD 3194
Query: 59 ----------TGGPDQVYL-------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ L V I V ++NDN P+ Y + E+ S
Sbjct: 3195 RELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 3254
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN F I+ +G +
Sbjct: 3255 VLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGI 3293
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAG 125
++V + V ++NDN P+ +Y Q+ E+ + L+ D D D +Q++SY I+ G
Sbjct: 2908 ILVSVTVTDINDNAPVFGHEMYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGG 2967
Query: 126 NPESYFNI 133
NP F +
Sbjct: 2968 NPRGRFAL 2975
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYF---------NIDIG 55
+Y Q+ E+ + L+ D D D +Q++SY I+ GNP F + +
Sbjct: 2928 MYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFALGLVQNEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L VY + V + V +VNDN P+ Y A E+
Sbjct: 2988 RPLDREEQDVYFLNITATDGLFVTQAMVEVTVIDVNDNSPVCDQVAYTALFPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A D D+ P+ I Y + +F +D SG L
Sbjct: 3048 ILKISAKDADIGPNGDIRYSLYGSGNNKFF-LDPESGEL 3085
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ P+ I Y + +GN + + + + G T
Sbjct: 3048 ILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKTLALLDREKIPVYNLVARATD 3107
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + +++VNDN P+ Y A + EN + + ++ A+D DL ++++
Sbjct: 3108 GGGRFCQSDIRLILEDVNDNPPIFSSDHYNACVYENTATKALLTRVQATDPDLGINRKVV 3167
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + YF++D SG
Sbjct: 3168 YSL-ADSAGGYFSVDSSSG 3185
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFVINIKTG 1203
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAFDADSGFNGKVVFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGRPQKSSWRLLTINVEDANDNRPIFLQESYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2189 PFYTTSVNEDIEMHTPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + + +VNDN P+ P Y A + E
Sbjct: 2246 LDYEETPVFKLTVRASDALTGARAEV--TVDLLINDVNDNPPIFNQPAYNATLSEASLIG 2303
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ ASD D + ++ + Y+I N YF+ID SG
Sbjct: 2304 TPVLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSG 2344
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG- 61
P Y A + E P++Q+ ASD D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PAYNATLSEASLIGTPVLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLILTA 2349
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P ++V I V ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQQSTLKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVTALDKDRGENAELLYSIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMIN---PKTGGISVID 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
YL+V I + +VNDN P VY A I E+ S
Sbjct: 3298 SLDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3358 DSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVD 3392
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D DL ++++ Y + A + YF++D S +
Sbjct: 3136 YNACVYENTATKALLTRVQATDPDLGINRKVVYSL-ADSAGGYFSVDSSSGIIILEQPLD 3194
Query: 59 ----------TGGPDQVYL-------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ L V I V ++NDN P+ Y + E+ S
Sbjct: 3195 RELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 3254
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN F I+ +G +
Sbjct: 3255 VLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGI 3293
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAG 125
++V + V ++NDN P+ +Y Q+ E+ + L+ D D D +Q++SY I+ G
Sbjct: 2908 ILVSVTVTDINDNAPVFGHEMYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGG 2967
Query: 126 NPESYFNI 133
NP F +
Sbjct: 2968 NPRGRFAL 2975
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYF---------NIDIG 55
+Y Q+ E+ + L+ D D D +Q++SY I+ GNP F + +
Sbjct: 2928 MYREQVKESDPPGEVVAVLSTWDEDTSDINQQVSYHITGGNPRGRFALGLVQNEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L VY + V + V +VNDN P+ Y A E+
Sbjct: 2988 RPLDREEQDVYFLNITATDGLFVTQAMVEVTVIDVNDNSPVCDQVAYTALFPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A D D+ P+ I Y + +F +D SG L
Sbjct: 3048 ILKISAKDADIGPNGDIRYSLYGSGNNKFF-LDPESGEL 3085
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ P+ I Y + +GN + + + + G T
Sbjct: 3048 ILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKTLALLDREKIPVYNLVARATD 3107
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + +++VNDN P+ Y A + EN + + ++ A+D DL ++++
Sbjct: 3108 GGGRFCQSDIRLILEDVNDNPPIFSSDHYNACVYENTATKALLTRVQATDPDLGINRKVV 3167
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + YF++D SG
Sbjct: 3168 YSL-ADSAGGYFSVDSSSG 3185
>gi|402894933|ref|XP_003910594.1| PREDICTED: protocadherin Fat 3 [Papio anubis]
Length = 4573
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDISVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 61 GPDQV---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL--PIVQLAASD 109
+ +L V +QV + NDN P + VY ++ E PI + A D
Sbjct: 1207 TTSRKLDREQQAEHFLEVVVQVLDENDNKPQFPEKVYQIKLPERDRKKRGEPIYRAFAFD 1266
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
D P+ ISY I GN + F ID +G
Sbjct: 1267 RDEGPNAEISYSIVDGNDDGKFFIDPKTG 1295
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y I N YF+ID S L
Sbjct: 2274 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYHIVQDTYNSTDYFHIDSSSGLILTA 2333
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2334 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2393
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2394 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2433
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1536 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1595
Query: 129 SYFNID 134
+ F I+
Sbjct: 1596 NTFKIE 1601
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3225 YLVTVPEDTSAGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3281
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3282 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3341
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3342 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3376
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2893 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2952
Query: 127 PESYFNI 133
P F +
Sbjct: 2953 PRGRFAL 2959
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2248 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2305
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y I N YF+ID SG
Sbjct: 2306 VHYHIVQDTYNSTDYFHIDSSSG 2328
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2912 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2971
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+ +
Sbjct: 2972 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCEQVAYTALLPEDIASNKI 3031
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 3032 ILKVSAKDADIGSNGDIRYSLYGSGNSE--FFLDPESGEL 3069
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG-------------------- 44
Y A + EN + + ++ A D D+ ++++ Y + SAG
Sbjct: 3120 YNACVYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSSSGIIILEQPLDR 3179
Query: 45 NPESYFNIDI-GSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+S +NI + +D + G L V I V ++NDN P+ Y + E+ S +
Sbjct: 3180 EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTSAGTQV 3239
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3240 LAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGI 3277
>gi|355752536|gb|EHH56656.1| hypothetical protein EGM_06114 [Macaca fascicularis]
Length = 4589
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDISVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSTVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCEQVAYTALLPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSLYGSGNSE--FFLDPESGEL 3085
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG-------------------- 44
Y A I EN + + ++ A D D+ ++++ Y + SAG
Sbjct: 3136 YNACIYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSSSGIIILEQPLDR 3195
Query: 45 NPESYFNIDI-GSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+S +NI + +D + G L V I V ++NDN P+ Y + E+ S +
Sbjct: 3196 EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQV 3255
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3256 LAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGI 3293
>gi|297268957|ref|XP_001084587.2| PREDICTED: protocadherin Fat 3 [Macaca mulatta]
Length = 4557
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDISVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSTVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCEQVAYTALLPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSLYGSGNSE--FFLDPESGEL 3085
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG-------------------- 44
Y A I EN + + ++ A D D+ ++++ Y + SAG
Sbjct: 3136 YNACIYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSSSGIIILEQPLDR 3195
Query: 45 NPESYFNIDI-GSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+S +NI + +D + G L V I V ++NDN P+ Y + E+ S +
Sbjct: 3196 EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQV 3255
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3256 LAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGI 3293
>gi|47216302|emb|CAF96598.1| unnamed protein product [Tetraodon nigroviridis]
Length = 240
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------ 61
P++ + A D D D + Y I G+ F ID + +
Sbjct: 36 PVMTITAEDEDKGQDGEVRYSIRDGSGLGIFTIDEETGIIRTQELLDHETTPHYWLTVYA 95
Query: 62 ------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
P ++ VYI+VQ+VNDN P T +PVYY ++EN + I+Q+ A D D
Sbjct: 96 MDRGVVPLSAFVEVYIEVQDVNDNAPQTSEPVYYPSVMENSPKDVSIIQINAIDPDTKAS 155
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
R+SY+I++GNP+ +F+I+ +G
Sbjct: 156 DRLSYRITSGNPQGFFSINTRTG 178
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
T +PVYY ++EN + I+Q+ A D D R+SY+I++GNP+ +F+I+ + L
Sbjct: 123 TSEPVYYPSVMENSPKDVSIIQINAIDPDTKASDRLSYRITSGNPQGFFSINTRTGL 179
>gi|332634638|ref|NP_001193811.1| protocadherin Fat 3 precursor [Bos taurus]
gi|296471991|tpg|DAA14106.1| TPA: protocadherin Fat 3-like [Bos taurus]
Length = 4555
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1110
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D ++++Y+I++GNP+++F I++ +G
Sbjct: 1171 AEDPDSSSSEKLTYRITSGNPQNFFAINVKTG 1202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D ++++Y+I++GNP+++F I++ + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSSEKLTYRITSGNPQNFFAINVKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGRFFIDPKTG 1310
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNMDSCFNIDMETGQLQVLMPMDREHRDLYLLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGNPQKSSWRLLTINVEDANDNSPIFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSEASLIGTPVLQVVSTDADSGNNKMVHYQIVQDTYNSTDYFHIDSASGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHESVQHCTLKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2448
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELMYTIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3240 YLVSVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRIN---PKTGGISVSE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYELCRKFYLVVEAKDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISEDALVG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDADSQPNGQIRFSIVNGDRDNEFAVD 3391
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2908 LVSVRVTDINDNTPVFAHKVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V + + V +VNDN P+ P Y + E P++Q+ ++D D ++
Sbjct: 2263 LTGARAEV--TIDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKM 2320
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2321 VHYQIVQDTYNSTDYFHIDSASG 2343
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2927 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2986
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2987 RHLDREEQDIYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCDQVAYTALLPEDIPSNKI 3046
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ P+ I Y + GN E F +D SG L
Sbjct: 3047 ILKVSAKDADIGPNGDIRYSLYGPGNNE--FFLDPESGEL 3084
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTGGP-DQVYLIVY-------- 70
I++++A D D+ P+ I Y + GN E + + + G T P D+ + Y
Sbjct: 3047 ILKVSAKDADIGPNGDIRYSLYGPGNNEFFLDPESGELKTLAPLDRERVPAYSLVARATD 3106
Query: 71 -----------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ +++VNDN P+ Y A + EN + + ++ A D D+ ++++
Sbjct: 3107 GGGRFCQSDLRLTLEDVNDNPPVFSSDHYNACVYENTATKALLTRVQAVDPDVGVNRKVV 3166
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + +F++D SG
Sbjct: 3167 YSL-ADSANGFFSVDSSSG 3184
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
Y A++ EN + ++ + A+DGD +ISY I + F ID +T
Sbjct: 2499 TYVAEVRENAAAGTKVIHVRATDGDPGMYGQISYAIINDFAKDRFLIDGNGQVTTTERLD 2558
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V + V + NDN P L Y A + + +
Sbjct: 2559 RENPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFLTVEYRASVRADVGRGHLV 2618
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2619 TQVQAMDPDDGANARITYSL 2638
>gi|157128510|ref|XP_001661462.1| hypothetical protein AaeL_AAEL011165 [Aedes aegypti]
gi|108872551|gb|EAT36776.1| AAEL011165-PA, partial [Aedes aegypti]
Length = 132
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+IQVQN NDNVP+T + VYY + E+ + ++QL A D D+DP Q+ISY+I++GNPE
Sbjct: 59 VFIQVQNENDNVPLTEEAVYYPSVPESSPNGVKVLQLIAEDRDIDPLQQISYRITSGNPE 118
Query: 129 SYFNIDIGSG 138
+F I+ SG
Sbjct: 119 GFFAINGTSG 128
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+T + VYY + E+ + ++QL A D D+DP Q+ISY+I++GNPE +F I+
Sbjct: 72 LTEEAVYYPSVPESSPNGVKVLQLIAEDRDIDPLQQISYRITSGNPEGFFAIN 124
>gi|426252195|ref|XP_004019801.1| PREDICTED: protocadherin Fat 3 [Ovis aries]
Length = 4477
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1110
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VY+++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 GSYWLTVYATDRGVVPLYSTIEVYVEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I++ +G
Sbjct: 1171 AEDPDSSSNEKLTYRITSGNPQNFFAINVKTG 1202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I++ + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINVKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGRFFIDPKTG 1310
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNMDSCFNIDMETGQLQVLMPMDREHRDLYLLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ ASD DL +
Sbjct: 804 DLGNPQKSSWRLLTINVEDANDNSPIFIQDSYSVNILESSSIGTEIIQVEASDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSEASLIGTPVLQVVSTDADSGNNKMVHYQIVQDTYNSTDYFHIDSASGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHESVQHCTLKVRATDNGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2448
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELMYTIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT------ 59
Y A + E+ I++++A D D+ P+ I Y + GN E + + D G T
Sbjct: 3033 YTASLPEDVPSNKIILKVSAKDADIGPNGDIRYSLYGPGNNEFFLDPDSGELKTLAPLDR 3092
Query: 60 --------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
GG V + +++VNDN P+ Y A + EN + + ++
Sbjct: 3093 ERVPAYSLIARATDGGGRFCQSDVRLTLEDVNDNPPVFSSDHYNACVYENTATKALLTRV 3152
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D+ ++++ Y + A + + +F++D SG
Sbjct: 3153 QAVDPDVGVNRKVVYSL-ADSADGFFSVDSSSG 3184
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 25/156 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2927 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2986
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2987 RHLDREEQDIYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCDQVAYTASLPEDVPSNKI 3046
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIG 136
I++++A D D+ P+ I Y + GN E + + D G
Sbjct: 3047 ILKVSAKDADIGPNGDIRYSLYGPGNNEFFLDPDSG 3082
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3240 YLVSVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRIN---PKTGGISVSE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYESCRKFYLVVEARDGGTPALSAVTTVGINLTDVNDNPPEFSQDVYSAVISEDALVG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDADSQPNGQIRFSIVNGDRDNEFAVD 3391
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V + + V +VNDN P+ P Y + E P++Q+ ++D D ++
Sbjct: 2263 LTGARAEV--TIDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSTDADSGNNKM 2320
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2321 VHYQIVQDTYNSTDYFHIDSASG 2343
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
Y A++ EN + ++ + A+DGD +ISY I + F ID +T
Sbjct: 2499 TYVAEVRENAAAGTKVIHVRATDGDPGMYGQISYAIINDFAKDRFLIDGNGQVTTTERLD 2558
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + +V + V + NDN P L Y A + + +
Sbjct: 2559 RENPLEGDISIFLRALDGGGRTTFCMVRVIVVDENDNAPQFLTVEYRASVRADVGRGHLV 2618
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2619 TQVQAMDPDDGANARITYSL 2638
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V + V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2908 LVSVTVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A + EN + + ++ A D D+ ++++ Y + A + + +F++D S +
Sbjct: 3135 YNACVYENTATKALLTRVQAVDPDVGVNRKVVYSL-ADSADGFFSVDSSSGIVVLERPLD 3193
Query: 60 ------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G V I V +VNDN P+ Y + E+ S
Sbjct: 3194 REQQSSYTLRVRATDQSPGRALSSLATVSITVLDVNDNPPVFERRDYLVSVPEDTSPGTQ 3253
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3254 VLAVFATSKDIGTNAEITYLIRSGNEQGKFRINPKTGGI 3292
>gi|332837491|ref|XP_001136982.2| PREDICTED: protocadherin Fat 3 [Pan troglodytes]
Length = 4557
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NMFKIE 1617
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E Y +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSLYGSGNSEFY--LDPESGEL 3085
>gi|397485377|ref|XP_003813824.1| PREDICTED: protocadherin Fat 3 [Pan paniscus]
Length = 4557
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E Y +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSLYGSGNSEFY--LDPESGEL 3085
>gi|158284498|ref|XP_307204.4| AGAP011528-PA [Anopheles gambiae str. PEST]
gi|157020991|gb|EAA03230.4| AGAP011528-PA [Anopheles gambiae str. PEST]
Length = 234
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+Y+ D P + VYI+VQN NDNVP+T D VYY + E+ + ++QLAA
Sbjct: 22 NYWLTVCAQDQAVVPLHSCVQVYIEVQNENDNVPLTEDAVYYPSVPESSPPNVKVLQLAA 81
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D+DP Q+ISY+I +GNPE F I+ SG
Sbjct: 82 EDRDIDPLQQISYRIISGNPEGNFAINSTSG 112
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T D VYY + E+ + ++QLAA D D+DP Q+ISY+I +GNPE F I+ S
Sbjct: 56 LTEDAVYYPSVPESSPPNVKVLQLAAEDRDIDPLQQISYRIISGNPEGNFAINSTSGLIT 115
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D P+ + + V +QV++VND+ P +Y QI N
Sbjct: 116 TTARKLDRENQPEHILEVLVMDNGEPQLSSTTRVVVQVEDVNDHAPEFDQKMYKVQIPAN 175
Query: 96 QSGILPIVQ 104
P+ Q
Sbjct: 176 AKIDQPLFQ 184
>gi|148886692|ref|NP_001008781.2| protocadherin Fat 3 precursor [Homo sapiens]
Length = 4557
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NMFKIE 1617
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
>gi|172045818|sp|Q8TDW7.2|FAT3_HUMAN RecName: Full=Protocadherin Fat 3; Short=hFat3; AltName:
Full=Cadherin family member 15; AltName: Full=FAT tumor
suppressor homolog 3; Flags: Precursor
Length = 4589
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NMFKIE 1617
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
>gi|403301749|ref|XP_003941545.1| PREDICTED: protocadherin Fat 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 4591
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ F+ID + + T
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDETGVITAADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGRFFIDPKTG 1311
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQIVSTDADSENNKIVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPALSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDYDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQIVSTDADSENNKI 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ + VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFVQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I TGG
Sbjct: 3241 YLVTVPEDTSPGSQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKI---HPKTGGISVSD 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSPPNGQIHFSIVNGDRDNEFTVD 3392
>gi|403301747|ref|XP_003941544.1| PREDICTED: protocadherin Fat 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 4559
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ F+ID + + T
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDETGVITAADILDRETT 1111
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGRFFIDPKTG 1311
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQIVSTDADSENNKIVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPALSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDYDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQIVSTDADSENNKI 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ + VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFVQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I TGG
Sbjct: 3241 YLVTVPEDTSPGSQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKI---HPKTGGISVSD 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSPPNGQIHFSIVNGDRDNEFTVD 3392
>gi|395743364|ref|XP_002822394.2| PREDICTED: protocadherin Fat 3 [Pongo abelii]
Length = 4589
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTAQDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFGQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P +Y A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDIYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
Length = 4589
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 SSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPAVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D ++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSSEKLTYRITSGNPQNFFAINIKTG 1203
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D ++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSSSEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QVQ+ NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVQDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSTSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSRSG 2449
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 50 FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
I LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D
Sbjct: 2256 LTIRASDSLTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTD 2313
Query: 110 GDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
D + ++ + Y+I N YF+ID SG
Sbjct: 2314 ADSENNKMVHYQIVQDTYNSTDYFHIDSTSG 2344
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V + + +VNDN P +Y A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVSGDRDNEFTVD 3392
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D ++++SY I+ GN
Sbjct: 2909 VVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSHVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYY 89
LD +Q+ SY IS +D + G L IV I V ++NDN P+ Y
Sbjct: 3193 LDREQQPSYNISVQ----------ATDQSPGQSLSSLAIVTITVLDINDNPPVFERRDYL 3242
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S ++ + A+ D+ + I+Y I +GN + F+I+ +G +
Sbjct: 3243 VTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGI 3293
>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
africana]
Length = 4556
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITTADILDRETM 1110
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI++++VNDN P+T +P++Y ++EN + ++Q+
Sbjct: 1111 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIFYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P++Y ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIFYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIM 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGNPQKSSWRLLTINVEDANDNNPIFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2188 PFYTASINEDIRMDTPILSINATSPE---GQGIVYIIIDGDPYKQFNIDFDTGVLKVASP 2244
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V +VNDN P+ +P Y + E
Sbjct: 2245 LDFEITPVYKLTVRASDALTGARAEV--TVDLLVNDVNDNPPIFDEPTYNTTLSEASLIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ ++D D + ++ + Y+I N YF+ID SG
Sbjct: 2303 TPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASG 2343
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL--- 58
+P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2288 EPTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASGLILT 2347
Query: 59 --------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2348 ARMLDHELVQHCTLKVRATDSGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYVSELAP 2407
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ ASD D R+ Y I +GN + F +D SG
Sbjct: 2408 RGHFVTRVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2448
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTSPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
++ ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2908 LISVRVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
Y A + EN + + ++ A D D+ ++++ Y + A + + +F+ID +
Sbjct: 3135 YNACVYENTATKALLTRVQAVDPDVGINRKVVYSL-ADSADGFFSIDGLSGIIILEQPLD 3193
Query: 56 SDLTGG-----------PDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+L P Q + V I V ++NDN P+ Y + E+ S
Sbjct: 3194 RELQSSYSISVQATDQSPGQALSSFTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQ 3253
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3254 VLTVFATSKDIGTNAEITYLIRSGNEQGKFRINPKTGGI 3292
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
+Y A++ EN + ++ + A+DGD +ISY I + F ID
Sbjct: 2499 MYVAEVRENAAAGTKVIHVRATDGDPGTYGQISYAIINDFAKDRFLIDSNGQVLTTERLD 2558
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P + Y A + + +
Sbjct: 2559 RENPLEGDISIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLV 2618
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2619 TQVQAMDPDDGANSRITYSL 2638
>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
Length = 4557
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 SSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPAVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D ++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSSEKLTYRITSGNPQNFFAINIKTG 1203
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D ++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSSSEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QVQ+ NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVQDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREQTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSTSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSRSG 2449
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 50 FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
I LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D
Sbjct: 2256 LTIRASDSLTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTD 2313
Query: 110 GDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
D + ++ + Y+I N YF+ID SG
Sbjct: 2314 ADSENNKMVHYQIVQDTYNSTDYFHIDSTSG 2344
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSIN---PKTGGISVSE 3297
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V + + +VNDN P +Y A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQDIYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I +G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVSGDRDNEFTVD 3392
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D ++++SY I+ GN
Sbjct: 2909 VVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSHVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYY 89
LD +Q+ SY IS +D + G L IV I V ++NDN P+ Y
Sbjct: 3193 LDREQQPSYNISVQ----------ATDQSPGQSLSSLAIVTITVLDINDNPPVFERRDYL 3242
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S ++ + A+ D+ + I+Y I +GN + F+I+ +G +
Sbjct: 3243 VTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGI 3293
>gi|332207901|ref|XP_003253033.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Nomascus
leucogenys]
Length = 4557
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VY++V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYVEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V + V + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVHVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNSPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP--- 62
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ + D++
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGDISVSEVLD 3300
Query: 63 ----DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL+V I + +VNDN P VY A I E+ +
Sbjct: 3301 YELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVGDSV 3360
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3361 ILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ Y + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEAYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIGSDLTGGPDQVYLI-- 68
+ L+ D D D ++++SY I+ GNP +S + + + L +Y +
Sbjct: 2943 VAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVKRPLDREEQDIYFLNI 3002
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ Y A + E+ I++++A D D+ +
Sbjct: 3003 TATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNEIILKVSAKDADIGSNG 3062
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
I Y + +GN E F +D SG L
Sbjct: 3063 DIRYSLYGSGNSE--FFLDSESGEL 3085
>gi|345787797|ref|XP_848507.2| PREDICTED: protocadherin Fat 3 isoform 9 [Canis lupus familiaris]
Length = 4557
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1052 VKENSRIGTSVLQVTAQDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINTKTG 1203
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINTKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADTGFNGKVLFTISDGNTDSCFNIDMETGQLKVLLPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGDPQKSSWRLLTINVEDANDNSPVFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSTDADSENNKLVHYQIVQDTYNSTDYFHIDSASGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 2350 RMLDHESVQHCILKIRATDNGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NTFKIE 1617
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKL 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSASG 2344
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 24/152 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---GSDLTGGPD 63
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ G ++ G D
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGRFRINPKTGGISVSEGLD 3300
Query: 64 -----QVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL+V I + +VNDN P VY A I E+ +
Sbjct: 3301 YELCKKFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISEDALVGDSV 3360
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ L A D D P+ +I + I G+ ++ F ++
Sbjct: 3361 ILLVAEDADSQPNGQIRFSIVNGDRDNEFAVE 3392
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
Length = 4555
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1110
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHRDLYLLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
+ Y +
Sbjct: 864 EVMYSV 869
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++QL ++D D ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSEASLIGTPVLQLVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSSSGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVTATDNGFPSMSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVL 2450
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3240 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPK---TGGISVLE 3296
Query: 62 ------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + NVNDN P VY A I E+
Sbjct: 3297 ALDYETCKRFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVYSAVISEDALEG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3391
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTSPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D + ++++SY I+ GN
Sbjct: 2908 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 25/153 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG------P 62
+ EN ++ ++A D D D + Y I GN F ID G T G
Sbjct: 1045 VKENSRAGTSVLTVSAKDDDKGRDGALRYSIKGGNGLGTFTIDEDTGVIYTAGILDCESK 1104
Query: 63 DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D +L VY IQV++VNDN P+T DP+Y+ ++EN + ++++
Sbjct: 1105 DAYWLTVYATDRGVTPLFASVEVFIQVEDVNDNAPLTSDPIYHPVVMENSPKDVSVIRIQ 1164
Query: 107 ASDGDLDPD-QRISYKISAGNPESYFNIDIGSG 138
A D DL R+SY+I+AGNP+++F+I+ +G
Sbjct: 1165 AQDPDLTSTPSRLSYRITAGNPQNFFSINPRTG 1197
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 30/163 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSDLT 59
+T DP+Y+ ++EN + ++++ A D DL R+SY+I+AGNP+++F+I+ + L
Sbjct: 1140 LTSDPIYHPVVMENSPKDVSVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFSINPRTGLI 1199
Query: 60 G----------------------GP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP Q + V + V++ NDN P + Y + E
Sbjct: 1200 TTTTRKLDREQQAEHFLEVTVIDGPVTTRQSTVWVIVHVEDENDNPPTFPEVTYRISLTE 1259
Query: 95 ---NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
N+ G P+ ++ A D DL + I+Y I GN + F ID
Sbjct: 1260 RDRNKRG-EPVYRVFAYDRDLGANGNITYSIIEGNGDEKFIID 1301
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+ ++ A DGD + R+ + IS GN + FNI++ + L Q+
Sbjct: 739 VFEVRARDGDAGFNGRVLFSISDGNKGNSFNINMENGLITVFQQLDRERLDRYFLNITIY 798
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ ++ + +++ NDN P + A ++EN + L ++ ++A D D+ +
Sbjct: 799 DQGIPQMSSWRLLTVIIEDTNDNDPQFYQDSFSALVLENAAIGLEVISISAFDRDMGQNG 858
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++SY++ P+ F ID +GS+
Sbjct: 859 QLSYRMQTNVPQ--FGIDSETGSV 880
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT-------------- 59
++++ A+ D+ + I+Y+I +GN F ID + DL
Sbjct: 3273 VLRVLATSVDIGLNAEITYRIRSGNELGKFTIDTQLGAIFVADDLDFEVCKDYYLTLEAW 3332
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P +V I++ +VNDN P +Y + E+ S + +++A D D +
Sbjct: 3333 DGGNPPLSSATVVTIELMDVNDNAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQVNG 3392
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI+Y I G+ ++F ID +G L
Sbjct: 3393 RITYSILKGDRNNHFWIDPVTGIL 3416
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S +N+ + +T G + V+I+VQ+ NDN P+ P Y + E+ + + ++
Sbjct: 1419 QSVYNMTV--QVTDGTNFATTQVFIRVQDSNDNPPVFSQPAYDVSVSEDVPVDVELARVR 1476
Query: 107 ASDGDLDPDQRISYKISAG-NPESY--FNIDIGSG 138
AS DLD R+SY I +P S F ++ G+G
Sbjct: 1477 AS--DLDERARLSYSIYGSVDPASMRLFRVNPGTG 1509
>gi|390469946|ref|XP_002754762.2| PREDICTED: protocadherin Fat 3 [Callithrix jacchus]
Length = 1221
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 24/155 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1034 VKENSRIGTSVLQVTAQDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETT 1093
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1094 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1153
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
A D D +++++Y+I++GNP+++F I+I + G
Sbjct: 1154 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTEHCG 1188
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 42/60 (70%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I ++ G
Sbjct: 1129 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTEHCG 1188
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ S I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D + Y I G+ FNID + + T
Sbjct: 1048 VKENSRIGTSVLQVTARDEDSGRDGEVQYSIRDGSGLGRFNIDEETGVIYTADVLDRETT 1107
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1108 GSYWLTVYAADRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPMVMENSPKDVSVIQIQ 1167
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F ++ +G
Sbjct: 1168 AQDPDSGSNEKLTYRITSGNPQNFFAMNFKTG 1199
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIG--- 55
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F N G
Sbjct: 1143 LTSEPIYYPMVMENSPKDVSVIQIQAQDPDSGSNEKLTYRITSGNPQNFFAMNFKTGVIT 1202
Query: 56 --------------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+D P Q + V +QV + NDN P + VY ++ E
Sbjct: 1203 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQIKLPER 1262
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1263 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1307
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ ASD D + ++ + IS GN + F ID+ +
Sbjct: 741 ILKIQASDADAGFNGKVVFTISDGNTDGRFAIDLETGQLRVLMPLDREQTDLYLLNITIY 800
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y ++E+ I+Q+ A D D P+
Sbjct: 801 DLGKPQRSSWRLLTVNVEDANDNRPVFLQESYSVNVLESSGIGTEIIQVEARDRDRGPNG 860
Query: 117 RISYKI 122
+ Y +
Sbjct: 861 TVGYSV 866
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D D+ ++++ Y + A + YF+ID S +
Sbjct: 3132 YSACVYENTATKALLTRVQATDPDVGVNRKVVYSL-ADSANGYFSIDRSSGIIILEQPLD 3190
Query: 59 ----------TGGPDQV-------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 3191 REVQSSYNISVKASDQSVALALSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQ 3250
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN F I+ +G +
Sbjct: 3251 VLAVFATSKDIGTNAEITYLIRSGNERGKFRINSRTGEI 3289
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 77 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNID 134
NDN P+ P Y A + E P++Q+ ASD D + ++ + Y+I N YF+ID
Sbjct: 2277 NDNAPVFDQPSYSATLSEASLIGTPVLQVVASDADSESNRLVQYQIVQDTFNSTDYFHID 2336
Query: 135 IGSG 138
SG
Sbjct: 2337 SSSG 2340
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+++V N N P+ VY A++ EN + +V + A+DGD P RI + I +
Sbjct: 2478 VHVRVLGANLNSPVFSQNVYVAEVRENAAPGTKVVHVRATDGDAGPYGRIDFSIINDFAK 2537
Query: 129 SYFNID 134
F ID
Sbjct: 2538 DRFTID 2543
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY A++ EN + +V + A+DGD P RI + I + F ID +
Sbjct: 2496 VYVAEVRENAAPGTKVVHVRATDGDAGPYGRIDFSIINDFAKDRFTIDSHGQIQTTEPLD 2555
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V + V + NDN P L + A + + +
Sbjct: 2556 RERPTEGDISIFVRAADGGGRATFCTVRVIVVDENDNAPQFLTVEFRASVKADVGRGHLV 2615
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2616 TQVQAVDPDDGVNSRITYSL 2635
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1548 VIVSVEDANDHSPYFTSPLYEASMFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1607
Query: 129 SYFNID 134
+ F I+
Sbjct: 1608 NTFKIE 1613
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ + ISY + +GN + + + + G T
Sbjct: 3044 ILKISAKDPDVGSNGDISYSLYGSGNNKFFLDPESGELKTLALLDREKIPVYNLIVRATD 3103
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG V++ +++VNDN P+ Y A + EN + + ++ A+D D+ ++++
Sbjct: 3104 GGGRFCQSEVHLILEDVNDNPPVFSSDHYSACVYENTATKALLTRVQATDPDVGVNRKVV 3163
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + YF+ID SG
Sbjct: 3164 YSL-ADSANGYFSIDRSSG 3181
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y + E+ S ++ + A+ D+ + I+Y I +GN F I+ + +++
Sbjct: 3237 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNERGKFRINSRTGEISVIEELD 3296
Query: 66 -------YLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
YL+V + + +VNDN P VY A I E+ S +
Sbjct: 3297 YELCKDFYLVVEAADGGTPALSAVATVNVNLTDVNDNAPQFNQEVYSAVISEDASVGDSV 3356
Query: 103 VQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIG 136
V L A D D P+ RI + I +G+ ES D+G
Sbjct: 3357 VLLIAEDVDSPPNGRIHFSIVSGDRDDESSVEPDLG 3392
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP 127
V + V +VNDN P VY + E+ + L+ D D D ++++SY I+ GNP
Sbjct: 2906 VAVTVTDVNDNAPAFAHEVYRGHVKESDPPGEVVAVLSTRDRDTSDLNRQVSYHITGGNP 2965
Query: 128 ESYFNIDI 135
F + +
Sbjct: 2966 RGKFALGL 2973
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI------------ 52
VY + E+ + L+ D D D ++++SY I+ GNP F +
Sbjct: 2924 VYRGHVKESDPPGEVVAVLSTRDRDTSDLNRQVSYHITGGNPRGKFALGLVQNEWKVYVK 2983
Query: 53 --------DIGSDLTGGPDQVYL---IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ S D +++ +V + V +VNDN P+ Y A I E+
Sbjct: 2984 RPLDREEQDVYSLNITATDGLFVTQAVVEVTVSDVNDNSPVCDQVAYTALIPEDIPSNKL 3043
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A D D+ + ISY + +F +D SG L
Sbjct: 3044 ILKISAKDPDVGSNGDISYSLYGSGNNKFF-LDPESGEL 3081
>gi|350588390|ref|XP_003357289.2| PREDICTED: protocadherin Fat 3 [Sus scrofa]
Length = 4301
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT 59
+ EN ++Q+ A D D D I Y I G+ FNID + + T
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETT 1110
Query: 60 GG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + VYI++++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 GSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1171 AEDPDSSSNEKLTYRITSGNPQNFFAINSKTG 1202
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINSKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHRDLYLLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGNPQRSSWRLLTINVEDANDNSPVFLQDSYSVTILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVRATDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDGKSG 2448
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I TGG
Sbjct: 3240 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRI---HPKTGGISVSE 3296
Query: 62 ------PDQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+ V I + +VNDN P VY A I E+
Sbjct: 3297 ILDYELCKKFYLVVEAKDGGTPALSAVATVSINLTDVNDNPPRFSQDVYSAVISEDALVG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ +S F +D
Sbjct: 3357 DSVILLIAEDADSQPNGQIRFSIVNGDRDSEFAVD 3391
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAAS------------DGDLDPDQRISYK---ISAGNPESY 49
P Y A I E+ S PI+ + A+ DGDL I + + +P Y
Sbjct: 2188 PFYTASINEDVSVDTPILSINATSPEGQGIIYIIIDGDLYKQFNIDFDTGVLKVVSPLDY 2247
Query: 50 FNIDI------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + SD LTG +V V + V ++NDN P+ P Y + E P+
Sbjct: 2248 EIISVYKLTVRASDALTGARAEV--TVDLLVNDINDNPPIFDQPTYNTTLSEASLIGTPV 2305
Query: 103 VQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
+Q+ ++D D + ++ + Y+I N YF+ID SG
Sbjct: 2306 LQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASG 2343
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2908 LVSVRVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
>gi|195591703|ref|XP_002085578.1| GD14850 [Drosophila simulans]
gi|194197587|gb|EDX11163.1| GD14850 [Drosophila simulans]
Length = 1459
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY +I EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 768 DFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 827
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 828 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 887
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 888 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 926
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 870 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 929
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 930 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 989
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 990 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1034
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1094 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNEDNTFYIGQDNGNILLSKYLDYETQ 1150
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1151 QSYNLTISVTDGTFTTFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1210
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1211 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1242
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 363 YNLTLRAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 422
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 423 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 454
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 401 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 460
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 461 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 520
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 521 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 558
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++ ++A D D D I Y I G+ F ID +
Sbjct: 1051 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDGLDRESTSHYWLTVYAA 1110
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1111 DRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVQIEAFDADSSSND 1170
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I +G
Sbjct: 1171 KLTYKITSGNPQGFFSIHPKTG 1192
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + +++YKI++GNP+ +F+I + L
Sbjct: 1137 TSEPVYYPEIIENSPKDVSVVQIEAFDADSSSNDKLTYKITSGNPQGFFSIHPKTGLITT 1196
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1197 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1256
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E S PI ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1257 RPERERNSKREPIYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1305
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--------------- 54
++ EN I+ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 723 EVKENHPVGASIIFMNATDLDTGFNGKLVYAISGGNEDSCFVIDMETGMLKILSPLDRET 782
Query: 55 ---------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + +V I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 783 TDKYTLNITASDLGIPQKAAWRLVDIRVLDANDNPPEFLQESYFVEVSEDKEVDSEIIQV 842
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 843 EATDKDLGPNGHVTYSILTDTDK--FSIDSVTG 873
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A++ EN P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2183 PFYSAEVPENIQMHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTVNFNTGVINVIAP 2239
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2240 LDFESHPAYKLSVRATDSLTGAHAEVF--VDIIVEDINDNPPVFGQQSYAATLSEAAVIG 2297
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2298 TSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2338
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++Q+ A+ D++ + I+Y I +GN F+ID I +L Y +
Sbjct: 3247 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEAT 3306
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V +VNDN P+ Y A I E+ ++ + A D D +
Sbjct: 3307 DGGTPSLSDVATVSINVTDVNDNSPVFSQDTYTAVISEDAVLEQSVITVMADDADGPSNS 3366
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I+ GN S F ID G +
Sbjct: 3367 HIRYSITDGNQGSPFTIDPARGEV 3390
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IG 55
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + F+ID I
Sbjct: 821 LQESYFVEVSEDKEVDSEIIQVEATDKDLGPNGHVTYSILTDTDK--FSIDSVTGVVKIV 878
Query: 56 SDLTGGPDQVY-------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
S L V+ +++ + +++VNDN P + P Y ++ E+
Sbjct: 879 SPLDREVQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPRFIPPNYRVKVREDL 938
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E +F++D SG++
Sbjct: 939 PEGTIIMWLEAHDPDLGQSSQVRYSL-LDHGEGHFDVDKLSGAV 981
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQN----- 75
+VQ+ A+D D +P++ ISY + + +S+ + I S TG V + Y Q Q
Sbjct: 2300 VVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSS-TGLISLVRTLDYEQFQQHKIFV 2358
Query: 76 ----------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+NDN P+ +Y A+I E+ + + A D D
Sbjct: 2359 RALDGGMPPLSSDVVVTVDVTDLNDNPPLFDQQIYEAKISEHAMHGHFVTCVKAYDADSS 2418
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN F ID +G
Sbjct: 2419 DIDRLDYSILSGNDHKNFVIDGETG 2443
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3214 VVVSVLDINDNPPVFEYREYGATVSEDILLGTEVLQVYAASRDIEANAEITYAIISGNEH 3273
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3274 GKFSIDSKTGAI 3285
>gi|195354340|ref|XP_002043656.1| GM19748 [Drosophila sechellia]
gi|194127824|gb|EDW49867.1| GM19748 [Drosophila sechellia]
Length = 1591
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY +I EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 292 DFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 351
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 352 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 411
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 412 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 450
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 394 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 453
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 454 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 513
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G L
Sbjct: 514 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHL 558
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+YI V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN
Sbjct: 1256 IYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYELKKGNG 1314
Query: 128 ESYFNIDIGSGSLG 141
E F +D +G L
Sbjct: 1315 E-LFKLDRKTGELS 1327
>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
Length = 3394
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 25/153 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------TGGP 62
+ EN ++Q+ A D D D I Y I+A + F+ID + +
Sbjct: 1049 VKENSRHGTSVLQVTAQDDDKGRDGVIRYSINARSGLGRFSIDEETGMIYTADSLDCEAQ 1108
Query: 63 DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D +L VY IQV++VNDN P+T +P+Y++ ++EN + +V++
Sbjct: 1109 DSYWLTVYATDRGVVPLSASIEVFIQVEDVNDNAPLTSEPIYHSYVMENSPKDVSVVRVQ 1168
Query: 107 ASDGDLDPDQ-RISYKISAGNPESYFNIDIGSG 138
A D D+ + R++Y+I+AGNP+++F+ID +G
Sbjct: 1169 AQDPDVTASESRLTYRITAGNPQNFFSIDYNTG 1201
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSDLT 59
+T +P+Y++ ++EN + +V++ A D D+ + R++Y+I+AGNP+++F+ID + L
Sbjct: 1144 LTSEPIYHSYVMENSPKDVSVVRVQAQDPDVTASESRLTYRITAGNPQNFFSIDYNTGLI 1203
Query: 60 -------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
G Q + V + VQ+ NDN P + +Y + E
Sbjct: 1204 TTTSRKLDREQQAEHFLEVTVMDGGGIFRQSTVWVIVHVQDENDNTPEFKESIYRISLPE 1263
Query: 95 ---NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
N+ G P+ ++ A D D + ++Y I GN + F ID +
Sbjct: 1264 RDRNKRGD-PVYRVFAYDRDEGSNADLTYSIVDGNDDGKFVIDAKTA 1309
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
++Q+ +DGD + RI + IS N +S FNIDI + L
Sbjct: 742 VLQVNTNDGDTGYNGRILHAISDPNSDSCFNIDIETGLIYIYQPLDRERSDRYLLNITVY 801
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + +++VNDN P Y A + EN + ++Q+ ASD DL +
Sbjct: 802 DLGIPQRSSWRLLTVNIEDVNDNSPEFSLESYTAVVTENAAIGTEVIQVTASDNDLGVNG 861
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
ISY + P F+I+ +GS+
Sbjct: 862 EISYTLLTNTP--LFSINSETGSV 883
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + +IV I++ +VNDN P + +Y I E+ + + +L A D D + RI+Y
Sbjct: 3192 PLRAAIIVTIELLDVNDNSPSFSEEIYNVLISEDIAIGETVTRLFAEDLDSQINGRITYS 3251
Query: 122 ISAGNPESYFNIDIGSGSL 140
I G+ E+ F ID +G L
Sbjct: 3252 ILKGDRENQFWIDPVTGLL 3270
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAG--NPESYFNIDIGSDL-------------------- 58
+++L A+D D + + ISY+I + N YF+ID S L
Sbjct: 2301 VIRLLATDKDSEKNNVISYEILSDGFNSTDYFHIDSTSGLLLTARLLDYELTSSFSFIVR 2360
Query: 59 ---TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
G P Q + V + + +VNDN P P+Y A + E + + ASD D
Sbjct: 2361 ATDNGSPSQNCEVTVTVFLSDVNDNPPSFNQPLYEAFVSELAPRGHIVTCIQASDLDSSD 2420
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ + Y I +G+ + F ID +G
Sbjct: 2421 AESLRYSILSGDEKMNFVIDSQTG 2444
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 46 PESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
P FN+ + SDL G +V + + +VNDN P T + YY V + +V
Sbjct: 2889 PSYTFNV-VASDLGEGVSLSSTAVVTVAIADVNDN-PPTFEREYYRGAVRESDPLGEVVS 2946
Query: 105 -LAASDGD-LDPDQRISYKISAGNPESYFNI 133
L+ DGD D ++ +S+ I+ GNP+ F +
Sbjct: 2947 VLSTRDGDSSDQNRLVSFHITGGNPKGVFAL 2977
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 2 TLDPVYYAQIVENQSGILPIVQ-LAASDGDL-DPDQRISYKISAGNPESYF--------- 50
T + YY V + +V L+ DGD D ++ +S+ I+ GNP+ F
Sbjct: 2925 TFEREYYRGAVRESDPLGEVVSVLSTRDGDSSDQNRLVSFHITGGNPKGVFALAPIQGEW 2984
Query: 51 NIDIGSDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ + L YL+ V + V + NDN P+ Y A E+
Sbjct: 2985 KVYVKRPLDREEQDQYLLNITASDGLFVTRIGVEVTVMDANDNSPICNQAEYKASFPEDV 3044
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+++ A+D D + I Y + E +F +D SG L
Sbjct: 3045 AVNTAILKVGATDLDTGANAEIQYSLFGIGVEDFF-MDANSGEL 3087
>gi|297293817|ref|XP_001091341.2| PREDICTED: protocadherin Fat 1, partial [Macaca mulatta]
Length = 1603
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D DL + ++ Y+
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYR 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F + +G
Sbjct: 1178 ITSGNPQGFFAVHPKTG 1194
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 52
T +PVYY +I+EN + +VQ+ A D DL + ++ Y+I++GNP+ +F +
Sbjct: 1139 TSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAV 1189
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F++D +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSVDSATG 875
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---------------- 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDKFSVDSATGVVKIMHP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLAQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY ++ EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 1090 DFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 1149
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 1150 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 1209
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 1210 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 1248
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 1192 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 1251
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 1252 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 1311
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 1312 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1356
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2843 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2902
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 2903 TENIQNIFDIDIYSG 2917
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1416 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQ 1472
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1473 QSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1532
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1533 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1564
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 3278 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 3337
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 3338 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKI 3397
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+ID +G++
Sbjct: 3398 LDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTIS 3436
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 3188 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAED 3247
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 3248 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 3307
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 3308 IHYFIMSGNEQGKFKMDSTTGDL 3330
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES----------------- 48
+Y I EN S I+++ A+D D + ++SY I + N ++
Sbjct: 2345 IYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLK 2404
Query: 49 ---------YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQI----VE 94
Y +I + G P V+I V+++NDN P ++P Y+ ++ V
Sbjct: 2405 TPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPSYFTKVSVAAVR 2464
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q LP A D D+ + YKI GN ++ID +G
Sbjct: 2465 GQFVALP----KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTG 2504
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN E
Sbjct: 2128 ISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKKGNGE- 2185
Query: 130 YFNIDIGSGSLG 141
F +D SG L
Sbjct: 2186 LFKLDRKSGELS 2197
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 366 YNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 425
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 426 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 457
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 2862 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 2921
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2922 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENAL 2981
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 2982 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 3016
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I V+++NDN P Y ++ +S + S D D ISY++S
Sbjct: 594 QTEIKLSIVVKDINDNRPQFERVNCYGKVT--KSAPMGTEVFVTSAIDFDAGDIISYRLS 651
Query: 124 AGNPESYFNIDIGSGSLG 141
GN + FN+D SGSL
Sbjct: 652 DGNEDGCFNLDPTSGSLS 669
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 404 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 463
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 464 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 523
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 524 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 561
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY ++ EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 1087 DFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 1146
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 1147 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 1206
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 1207 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 1245
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 1189 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 1248
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 1249 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 1308
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 1309 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1353
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2859 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2918
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 2919 TENIQNIFDIDIYSG 2933
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1413 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQ 1469
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1470 QSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1529
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1530 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1561
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 3294 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 3353
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 3354 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKI 3413
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+ID +G++
Sbjct: 3414 LDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTIS 3452
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 3204 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAED 3263
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 3264 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 3323
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 3324 IHYFIMSGNEQGKFKMDSTTGDL 3346
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN E
Sbjct: 2125 ISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKKGNGE- 2182
Query: 130 YFNIDIGSGSLG 141
F +D SG L
Sbjct: 2183 LFKLDRKSGELS 2194
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 363 YNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 422
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 423 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 454
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 2878 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 2937
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2938 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENAL 2997
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 2998 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 3032
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I V+++NDN P Y ++ +S + S D D ISY++S
Sbjct: 591 QTEIKLSIVVKDINDNRPQFERVNCYGKVT--KSAPMGTEVFVTSAIDFDAGDIISYRLS 648
Query: 124 AGNPESYFNIDIGSGSLG 141
GN + FN+D SGSL
Sbjct: 649 DGNEDGCFNLDPTSGSLS 666
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 401 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 460
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 461 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 520
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 521 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 558
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY ++ EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 1090 DFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 1149
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 1150 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 1209
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 1210 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 1248
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 1192 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 1251
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 1252 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 1311
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 1312 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1356
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2843 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2902
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 2903 TENIQNIFDIDIYSG 2917
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1416 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQ 1472
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1473 QSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1532
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1533 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1564
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 3278 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 3337
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 3338 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKI 3397
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+ID +G++
Sbjct: 3398 LDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTIS 3436
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 3188 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAED 3247
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 3248 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 3307
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 3308 IHYFIMSGNEQGKFKMDSTTGDL 3330
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES----------------- 48
+Y I EN S I+++ A+D D + ++SY I + N ++
Sbjct: 2345 IYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLK 2404
Query: 49 ---------YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQI----VE 94
Y +I + G P V+I V+++NDN P ++P Y+ ++ V
Sbjct: 2405 TPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPSYFTKVSVAAVR 2464
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q LP A D D+ + YKI GN ++ID +G
Sbjct: 2465 GQFVALP----KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTG 2504
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN E
Sbjct: 2128 ISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKKGNGE- 2185
Query: 130 YFNIDIGSGSLG 141
F +D SG L
Sbjct: 2186 LFKLDRKSGELS 2197
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 366 YNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 425
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 426 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 457
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 2862 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 2921
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2922 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENAL 2981
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 2982 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 3016
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I V+++NDN P Y ++ +S + S D D ISY++S
Sbjct: 594 QTEIKLSIVVKDINDNRPQFERVNCYGKVT--KSAPMGTEVFVTSAIDFDAGDIISYRLS 651
Query: 124 AGNPESYFNIDIGSGSLG 141
GN + FN+D SGSL
Sbjct: 652 DGNEDGCFNLDPTSGSLS 669
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 404 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 463
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 464 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 523
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 524 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 561
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 25/153 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++ + A D D D + Y I G+ F ID
Sbjct: 1034 VKENSRAGTSVLPVTAKDDDNGRDGTLRYSIRGGSGLGTFTIDEDTGMIYTAGILDCETK 1093
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +D P + V+I++++VNDN P+T DP+Y+ I+EN + ++Q+
Sbjct: 1094 DSYWLTVVATDRGATPLSASVEVFIEIEDVNDNAPLTSDPIYHPVIMENSPKDVSVIQIQ 1153
Query: 107 ASDGDLDPD-QRISYKISAGNPESYFNIDIGSG 138
A D DL R+SY+I+AGNP+++F+I+ +G
Sbjct: 1154 AQDPDLSTKPSRLSYRITAGNPQNFFSINPRTG 1186
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 32/164 (19%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNID------ 53
+T DP+Y+ I+EN + ++Q+ A D DL R+SY+I+AGNP+++F+I+
Sbjct: 1129 LTSDPIYHPVIMENSPKDVSVIQIQAQDPDLSTKPSRLSYRITAGNPQNFFSINPRTGLI 1188
Query: 54 ---------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
I S +T V++IV+I ++ NDN P + Y +
Sbjct: 1189 TTTARKLDREQQAEHFLEVTVIDSPVTTRQSTVWVIVHI--EDENDNRPTFPEATYRISL 1246
Query: 93 VE--NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
E + P+ ++ A D D + I+Y I+ GN E ++ID
Sbjct: 1247 PERDRNRRVEPVYRVFAYDRDSGANGNITYSITDGNEEDNYSID 1290
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDL--------------- 58
++++ A+ D+ P+ I+Y I +GN F +I + DL
Sbjct: 3256 VLRVLATSADIGPNAEITYTIRSGNELGKFIINRKLGSISVADDLDFEVCKDYYITVEAW 3315
Query: 59 -TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+G P +V I++ +VNDN P VY I E+ S + +++A D D +
Sbjct: 3316 DSGNPPLSTATMVVIELMDVNDNAPTFDQDVYNVLISEDASVGQTVTRVSAEDLDSQVNG 3375
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI+Y I G+ ++F ID +G L
Sbjct: 3376 RITYSILKGDRSNHFWIDPVTGLL 3399
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V+++NDNVP Y A + E ++Q+ A D D + +++Y I AGN
Sbjct: 1534 IVVAVEDINDNVPFFTRTTYDAVVYETSPAGYSVLQVTALDKDSGINGQLTYSIEAGNTR 1593
Query: 129 SYFNIDIGSGSL 140
F ID +G +
Sbjct: 1594 GVFIIDNATGRI 1605
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
VY I E+ S + +++A D D + RI+Y I G+ ++F ID + L
Sbjct: 3346 VYNVLISEDASVGQTVTRVSAEDLDSQVNGRITYSILKGDRSNHFWIDPVTGLLKVNKKL 3405
Query: 59 ----------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + V I + +VNDN P+ P A I NQ
Sbjct: 3406 DRELVSMYTLSVQAFDSGSPAMSTRVTVNIDISDVNDNPPVFAPPNSTAVIQLNQVAGTE 3465
Query: 102 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+++L+ SD D + ++I++GN SYF +D
Sbjct: 3466 LLKLSVSDKDSPRNGAPFVFRIASGNEGSYFALD 3499
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ Q+ A DGD + R+ + IS GN E+ FNID+ + L
Sbjct: 728 VFQVRARDGDSGFNGRVLFSISDGNKENSFNIDMDNGLITVLQPLDREQLDRYFLNITIY 787
Query: 59 -TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + ++ + +++ NDN P Y A + EN + ++ + A D D+ +
Sbjct: 788 DQGIPTMSSWRLLTVIIEDANDNDPRFYQDNYSAVVAENSAIGSEVITITAFDKDMGQNG 847
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++S+ + P +F ID +G++
Sbjct: 848 QLSFIMLTNIP--HFGIDSITGTV 869
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VNDN P+ Y I E+ + ++++ A+ D+ P+ I+Y I +GN
Sbjct: 3225 ILVLDVNDNAPVFQKRDYAVTIPEDVAVGTEVLRVLATSADIGPNAEITYTIRSGNELGK 3284
Query: 131 FNIDIGSGSL 140
F I+ GS+
Sbjct: 3285 FIINRKLGSI 3294
>gi|327269193|ref|XP_003219379.1| PREDICTED: protocadherin Fat 3-like [Anolis carolinensis]
Length = 4553
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y + G+ FNID + + D
Sbjct: 1048 VKENARIGTSVLQVTARDDDNGRDGEIQYSVRDGSGLGRFNIDEETGVIYTADILDRETT 1107
Query: 64 QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
Q Y + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1108 QSYWLTVYATDRGVVPLFTTIEVYIEVEDVNDNAPLTSEPIYYPSVMENSPKDVSVIQIQ 1167
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1168 AQDPDSTTNEKMTYRITSGNPQNFFIINTKTG 1199
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1143 LTSEPIYYPSVMENSPKDVSVIQIQAQDPDSTTNEKMTYRITSGNPQNFFIINTKTGLIT 1202
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + + IQV + NDN P + VY ++ E
Sbjct: 1203 TTSRKLDREQQAEHFLEVTVTDGGTSPKQSTVWLVIQVLDENDNKPQFPEKVYQIKLPER 1262
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1263 DRKKRGEPIYRAFAVDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1307
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I ++ A D D + ++ Y IS GN +S FN+++ + L
Sbjct: 741 IFRIKAYDVDSGFNGKVLYTISDGNVDSCFNLEMETGLLKVLLPLDREKTELYLLNITIY 800
Query: 60 --GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ I V++ NDN P L Y I E+ S + I+Q+ A D DL +
Sbjct: 801 DLGTPQKATWRLLTITVEDANDNRPEFLQESYSVNIFESTSIGVEIIQVEARDRDLGSNG 860
Query: 117 RISYKI 122
++Y I
Sbjct: 861 EVTYSI 866
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A + EN + + ++ A+D D+ +++I Y + A + E +F++D S +
Sbjct: 3132 YTACVYENTATKALLTRVQANDPDVGVNRKIVYSL-ADSSEGFFSVDKSSGIIILEHPLD 3190
Query: 60 -----------GGPDQ-------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 3191 RELQPSYNVTIKASDQGIVQTLSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPSAE 3250
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A+ D+ + I+Y I +GN + F I+ +GS+
Sbjct: 3251 ILSVFATSKDIGTNAEITYLIRSGNEKGKFRINSRTGSI 3289
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q+ A D D+ + I Y + +GN + Y + + G T P D+ + VY
Sbjct: 3044 ILQMGAKDADIGSNGEIRYSLYGSGNNKFYLDPESGELKTLAPLDREKIPVYNLIARATD 3103
Query: 71 -----------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ +++VNDN PM Y A + EN + + ++ A+D D+ +++I
Sbjct: 3104 GGGRFCQSEIHLILEDVNDNPPMFSSDHYTACVYENTATKALLTRVQANDPDVGVNRKIV 3163
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + E +F++D SG
Sbjct: 3164 YSL-ADSSEGFFSVDKSSG 3181
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGS-------D 57
Y + E+ S I+ + A+ D+ + I+Y I +GN + F I+ GS D
Sbjct: 3237 YLVTVPEDTSPSAEILSVFATSKDIGTNAEITYLIRSGNEKGKFRINSRTGSIYVIEHLD 3296
Query: 58 LTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D +I V I V +VNDN P VY A I E+ S +
Sbjct: 3297 YETCKDFFLIIEAKDGGSPALSAVTTVNINVTDVNDNAPRFSQEVYSAVISEDASVGDSL 3356
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ L A D D P+ +I + I G+ + F+ID
Sbjct: 3357 ITLIAEDLDSPPNGQIHFSIINGDRNNEFSID 3388
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2185 PFYTATVNEDIEMHTPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLSVISP 2241
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + + ++NDN P+ Y A + E
Sbjct: 2242 LDYEVNPIFKLTVRASDALTGARAEV--TVDLIINDMNDNAPVFEHFAYNATLSEGSLIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ A+D D + ++ I Y+I N YF+ID SG
Sbjct: 2300 TPVLQVIATDADSENNKIIQYQIVQDTFNSTDYFHIDGSSG 2340
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A I E+ S ++ L A D D P+ +I + I G+ + F+ID
Sbjct: 3341 VYSAVISEDASVGDSLITLIAEDLDSPPNGQIHFSIINGDRNNEFSIDPSLGLIKVKKRL 3400
Query: 54 -----------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + +G P + V + + +VNDN P+ Y A I EN+
Sbjct: 3401 DRERISGYSLVIQARDSGIPSLSASVTVNVDISDVNDNSPVFTPANYTAVIQENKPIGTS 3460
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D L ++ I AGN E F +D
Sbjct: 3461 ILQLVVTDKDSLHNGPPFTFSILAGNEEGEFTLD 3494
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG--- 61
Y A + E P++Q+ A+D D + ++ I Y+I N YF+ID S L
Sbjct: 2288 YNATLSEGSLIGTPVLQVIATDADSENNKIIQYQIVQDTFNSTDYFHIDGSSGLILTARL 2347
Query: 62 ---------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
P ++V I V ++NDN P+ +Y + + E
Sbjct: 2348 LDHELMQQCILKVRATDNGFPPLSSEVLVSIFVTDMNDNPPIFNQLIYESYVSELAPRGH 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2408 FVTCVQASDADSSDFDRLEYSILSGNDRTSFVMDSKSG 2445
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 30/157 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISY----KISAGNPESYFNIDIGS------ 56
Y A I+E +VQ+ A+D D + +++Y ++ A F ID S
Sbjct: 2815 YEAIIMEGMPIGTKLVQVKATDADWGANGQVTYSLLAEVEADRITEVFTIDSNSGWISTL 2874
Query: 57 ---DLTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + +V + V ++NDN P+ +Y + E+ S
Sbjct: 2875 KDLDHERNPTFSFTVVSSDLGETLSLSSTTLISVTVTDINDNAPVFEHDMYRGTVKESDS 2934
Query: 98 GILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
+ L+ D D D ++++SY I+ GNP+ F++
Sbjct: 2935 PGEVVAVLSTWDEDTSDINRQVSYHITGGNPKGKFDL 2971
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I +GN
Sbjct: 1548 VIVNVEDSNDHSPYFTSPLYEASVFESAAIGSAVLQVTALDKDKGENAELIYTIESGNTG 1607
Query: 129 SYFNID 134
+ F I+
Sbjct: 1608 NTFKIE 1613
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID---------IG 55
+Y + E+ S + L+ D D D ++++SY I+ GNP+ F++ +
Sbjct: 2924 MYRGTVKESDSPGEVVAVLSTWDEDTSDINRQVSYHITGGNPKGKFDLGLVQNEWKVYVK 2983
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L VYL+ V + V +VNDN P+ Y A E+
Sbjct: 2984 RPLDREEQDVYLLNITATDGLFVTQTAVEVIVTDVNDNNPVCDQVTYIAIFPEDIPPNKV 3043
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D+ + I Y + G+ + F +D SG L
Sbjct: 3044 ILQMGAKDADIGSNGEIRYSL-YGSGNNKFYLDPESGEL 3081
>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
Length = 4614
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLTGG-------- 61
++ + A D D D I Y I G+ F+ID + + T
Sbjct: 1052 VMTVTAEDEDRGRDGEIRYSIRDGSGLGVFSIDEETGIIRTQELLDRETTSHYWLTVYAM 1111
Query: 62 -----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P ++ VYI+VQ+VNDN P T +PVYY ++EN + + I+Q+ A D D
Sbjct: 1112 DRGVVPLSAFVEVYIEVQDVNDNAPQTSEPVYYPSVMENSAKDVSIIQINAVDPDAKASD 1171
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F I+ +G
Sbjct: 1172 KLTYKITSGNPQGFFAINTKTG 1193
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY ++EN + + I+Q+ A D D +++YKI++GNP+ +F I+ + L
Sbjct: 1138 TSEPVYYPSVMENSAKDVSIIQINAVDPDAKASDKLTYKITSGNPQGFFAINTKTGLVTT 1197
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + V +QV + NDN P+ L+ +Y Q+ E +
Sbjct: 1198 TSRKLDREQQDEHILEVTITDHGVPPKSTTVRVIVQVLDENDNRPLFLEKIYKIQLPERE 1257
Query: 97 S-------GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ ASD D P+ ISY I G+ F I+ +G
Sbjct: 1258 RPENERAMKRYPVYRVIASDRDDGPNAEISYSIEDGDEHGKFFIEPKTG 1306
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y +I EN P++ + A+D + RI Y IS G+P F+ID +
Sbjct: 2186 PFYSIEIPENIQLHSPVLHVQANDSE---GPRIVYTISEGDPFKQFSIDFNTGVIHVIQP 2242
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I +++VNDN P+ L YYA I E
Sbjct: 2243 LDFETHPAYKLNVRATDSLTGAHSEVF--VDIILEDVNDNAPVFLSKTYYANISEASVIG 2300
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
++Q+ A D D +Q + +++ G YF ID +G
Sbjct: 2301 TSVLQVDAKDSDTGNNQEVFFQLVEERGKSSDYFTIDRNTG 2341
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E+ + ++++ A+ D D + I+Y I +GN F++D
Sbjct: 3237 YTATVSEDVAVGTQVLRVHAASRDADANGEITYSIISGNEHGMFSVDPKTGDVFVIEPLD 3296
Query: 54 --------IGSDLTGG---PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + T G P V I + +VNDN P+ VY A I E+ +
Sbjct: 3297 YEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVISEDAELGKTV 3356
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + Y I AGN S F ID G L
Sbjct: 3357 MAVMAEDFDGPAYNHVRYSIVAGNQGSPFTIDPVRGEL 3394
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLT- 59
L YYA I E ++Q+ A D D +Q + +++ G YF ID + +
Sbjct: 2285 LSKTYYANISEASVIGTSVLQVDAKDSDTGNNQEVFFQLVEERGKSSDYFTIDRNTGIIS 2344
Query: 60 ---------------------GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
GG + +IV I V ++NDN P+ + Y I E
Sbjct: 2345 TAQVLDHEEIQQHKLRVRVVDGGVPALSSDIIVTIDVTDLNDNAPVFTEHTYRTTISELA 2404
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ ASD D ++ + I +GN + F I+ +G +
Sbjct: 2405 PRGHFVSQVQASDPDSSDTNKLQFSIISGNEDQNFAINKRTGDI 2448
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGD---------LDPDQRISYKISAG---------NPES 48
Y A I EN S + +AA L+PD R ++G + E+
Sbjct: 1985 YKAYIRENSSEKKTLAVIAAVGNQVNEPLFYKILNPDSRFEISRTSGVVSTTGIPFDREA 2044
Query: 49 YFNIDIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQ 104
DI ++T D+ +++V + V+++NDN PM ++ Y+A + V+ + G + I Q
Sbjct: 2045 QDTFDIVVEVTREDQSEDKAHVLVTVTVEDINDNAPMFVNLPYHALVQVDAEEGQV-IRQ 2103
Query: 105 LAASDGDLDPDQRISYKIS 123
+ A D D+ P+ I Y++
Sbjct: 2104 VTAVDKDIGPNANIQYQLK 2122
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 16 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGSDLTGGPDQVY 66
SG++ I+ D + D ++++ + I+ G+P+ F I+ + L Y
Sbjct: 2937 SGVIAILSTTDDDSE-DINKQVDFFITGGDPQGQFAIEHIQNEWKVSVRKPLDREEKDNY 2995
Query: 67 L--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
L +V ++V + NDN P+ VY + E+ I+Q++A+D D+
Sbjct: 2996 LLNITASDGIFTAKAVVEVKVLDANDNSPVCDKSVYSESVPEDSPAGRLILQVSATDADI 3055
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +ISY++ E F ID +G L
Sbjct: 3056 RSNAQISYELQGVGSE-LFIIDFVTGEL 3082
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V+ VN +P+ P Y +I EN P++ + A+D + RI Y IS G+P
Sbjct: 2169 IEVPVRVVNKAMPVFEKPFYSIEIPENIQLHSPVLHVQANDSE---GPRIVYTISEGDPF 2225
Query: 129 SYFNIDIGSG 138
F+ID +G
Sbjct: 2226 KQFSIDFNTG 2235
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++NDN P+ Y A + E+ + ++++ A+ D D + I+Y I +GN
Sbjct: 3218 VVISVLDINDNPPVFEHREYTATVSEDVAVGTQVLRVHAASRDADANGEITYSIISGNEH 3277
Query: 129 SYFNIDIGSG 138
F++D +G
Sbjct: 3278 GMFSVDPKTG 3287
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI-------- 68
+ A+D D D + + Y+I +YF ID I S L V+
Sbjct: 1795 IHATDADCDQNAMLIYQIVEPFAHNYFAIDSSTGAIRITSPLDYEQRSVFRFTVQVHDLG 1854
Query: 69 -----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
V I+V +VND P+ Y A ++ + ++Q++A+D D P+ +
Sbjct: 1855 MPRLFAETTANVTIEVIDVNDCAPVLSQEQYEATVIVPTYKGVEVIQVSATDADSGPNSK 1914
Query: 118 ISYKISAGNPESYFNID 134
+ + IS GN F +D
Sbjct: 1915 LLFSISEGNIGDKFKMD 1931
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V + NDN P + Y ++ E+ + ++Q+ A D D + + Y I +GN
Sbjct: 1549 VIVNVDDTNDNAPWFIGTPYSGRVFESAAVGTAVLQVTALDKDKGSNAEVVYHIESGNVA 1608
Query: 129 SYFNID 134
+ F ID
Sbjct: 1609 NSFAID 1614
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V N NDNVP++ + VYY I+E+ ++Q+ ASD D DP+Q+I+YKI++G+PE
Sbjct: 1156 VYIEVLNENDNVPLSDEAVYYPTILEDSPAGSSVLQIRASDKDKDPNQKITYKITSGSPE 1215
Query: 129 SYFNIDIGSG 138
+F+I+ +G
Sbjct: 1216 RFFSINSSTG 1225
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
+ VYY I+E+ ++Q+ ASD D DP+Q+I+YKI++G+PE +F+I+ + L
Sbjct: 1172 EAVYYPTILEDSPAGSSVLQIRASDKDKDPNQKITYKITSGSPERFFSINSSTGL 1226
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 7 YYAQIVENQSG-ILPIVQLAASDG------------DLDPDQRISYKISAGNPESYFNID 53
++ QIVEN + I IV ++ D D DPD ++I + FNI+
Sbjct: 269 HHPQIVENSNADIYAIVNVSDKDSGIHGEIKSLEIVDGDPDGH--FRIRPTKQKGEFNIE 326
Query: 54 I------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ D P + Y V + + ++NDN P+ +Y ++ E
Sbjct: 327 VLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVPVHLTDLNDNAPVFNKEIYEVKVPET 386
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+++L +D D + ++ +I GN FNI+ +G L
Sbjct: 387 APVNTPLIRLKVTDADEGRNAQVFLEIVGGNEGGEFNINPETGML 431
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y+A + E + +V++ A+ D + ++Y I GN F I+ + + D +
Sbjct: 3231 YFAVVPEIDAVGTEVVKVLATSKDTGVNADVTYSIIGGNEHKKFAINNKTGVISIADMLD 3290
Query: 66 ------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I V + NDN P+ Y A+I E+ I
Sbjct: 3291 YERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDKI 3350
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D D + +++Y I G+ F ID SG
Sbjct: 3351 LQVIATDLDSDRNGKVTYSIIRGDDREQFEIDPDSG 3386
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 22/135 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT--------- 59
Q+ ENQ P+ + A+D D I+Y I + F ID S LT
Sbjct: 2507 QVPENQPSGFPVTVVKATDEDFGEFGTITYSIHSELLSEIFKIDKTSGKLTTKVRLDREK 2566
Query: 60 ------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
GG ++ V I+V + NDN P L Y I N S + +++ A
Sbjct: 2567 QKLYEVLIMATDGGGKSGFITVRIKVADENDNAPYFLLKEYQTSIHYNYSLNVLFLRVKA 2626
Query: 108 SDGDLDPDQRISYKI 122
D D P +I Y+I
Sbjct: 2627 VDPDEGPAAQIRYQI 2641
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 9 AQIVENQSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
A+I N+S L +V+L A D DL + ++ Y IS G+ S F +D+ +
Sbjct: 750 AEIKVNESVALGTTLVKLKARDRDLGYNGKLIYGISGGDKHSQFCVDMDTGELKVIGYLD 809
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DL ++ I V +VNDN P+ + ++ EN I
Sbjct: 810 RERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFERSLASFRVTENALNGTAI 869
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ A+D D + +++Y + + F +D +G L
Sbjct: 870 FRANATDADAGDNAKVTYSLITDTRD--FAVDRTTGVLA 906
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y A+I E+ I+Q+ A+D D D + +++Y I G+ F ID + +L
Sbjct: 3336 YSARIREDAQIGDKILQVIATDLDSDRNGKVTYSIIRGDDREQFEIDPDSGYVSVAEELD 3395
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y++ + I++ + NDN P+ Y I E++ PI
Sbjct: 3396 RETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNYTTVIQEDKPIGYPI 3455
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+Q +D D P+ ++ +GN + F ++
Sbjct: 3456 IQFKITDADTAPNTEPYTFDFRSGNDGNSFRLE 3488
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 61 GPDQVYL----IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GPD L +V I + ++NDN P P Y +I E+ + + ASD DL D
Sbjct: 932 GPDNPPLYSEALVRISIDDINDNAPKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDG 991
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y + + + F ID SG++
Sbjct: 992 EVVYFLEDSDSDGTFKIDRLSGTI 1015
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKI 122
Q + + ++VQ+VNDN P + V ++ I I+ L+A D D ISY+I
Sbjct: 568 QTEMQLTVKVQDVNDNRPQ-FEKVDCIGVIPRSISIGSEIITLSAID--FDSGNIISYRI 624
Query: 123 SAGNPESYFNIDIGSGSL 140
+GN + F+ID SG++
Sbjct: 625 VSGNEDGCFSIDTTSGTI 642
>gi|119587285|gb|EAW66881.1| hCG1642212, isoform CRA_a [Homo sapiens]
Length = 144
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 54/73 (73%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V++VNDN P+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+
Sbjct: 24 VYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQ 83
Query: 129 SYFNIDIGSGSLG 141
++F I+I +GS
Sbjct: 84 NFFAINIKTGSCS 96
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 40/56 (71%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I +
Sbjct: 37 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKT 92
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V N NDNVP++ + VYY I+E+ ++Q+ ASD D DP+Q+I+YKI++G+PE
Sbjct: 1156 VYIEVLNENDNVPLSDEAVYYPTILEDSPAGSSVLQIRASDKDKDPNQKITYKITSGSPE 1215
Query: 129 SYFNIDIGSG 138
+F+I+ +G
Sbjct: 1216 RFFSINSSTG 1225
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+ VYY I+E+ ++Q+ ASD D DP+Q+I+YKI++G+PE +F+I+ + L
Sbjct: 1172 EAVYYPTILEDSPAGSSVLQIRASDKDKDPNQKITYKITSGSPERFFSINSSTGLITTTS 1231
Query: 59 -------------------TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P Y++V ++ ++NDN P Y QI +
Sbjct: 1232 RKLDRETLDEHILEVQISDNGSPPLSSTTYVVV--KIDDINDNAPEFEQISYSVQIPASA 1289
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ Q+ A D D P+ + Y I +G +S F ID +G
Sbjct: 1290 DFNQAVFQVLAFDRDSGPNSELHYSIKSGKGKSKFKIDNTTG 1331
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 33/165 (20%)
Query: 7 YYAQIVENQSG-ILPIVQLAASDG------------DLDPDQRISYKISAGNPESYFNID 53
++ QIVEN + I IV ++ D D DPD ++I + FNI+
Sbjct: 269 HHPQIVENSNADIYAIVNVSDKDSGIHGEIKSLEIVDGDPDGH--FRIRPTKQKGEFNIE 326
Query: 54 I------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ D P + Y V + + ++NDN P+ +Y ++ E
Sbjct: 327 VLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSVPVHLTDLNDNAPVFNKEIYEVKVPET 386
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+++L +D D + ++ +I GN FNI+ +G L
Sbjct: 387 APVNTPLIRLKVTDADEGRNAQVFLEIVGGNEGGEFNINPETGML 431
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y+A + E + +V++ A+ D + ++Y I GN F I+ + + D +
Sbjct: 3270 YFAVVPEIDAVGTEVVKVLATSKDTGVNADVTYSIIGGNEHKKFAINNKTGVISIADMLD 3329
Query: 66 ------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I V + NDN P+ Y A+I E+ I
Sbjct: 3330 YERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDKI 3389
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D D + +++Y I G+ F ID SG
Sbjct: 3390 LQVIATDLDSDRNGKVTYSIIRGDDREQFEIDPDSG 3425
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 22/135 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT--------- 59
Q+ ENQ P+ + A+D D I+Y I + F ID S LT
Sbjct: 2546 QVPENQPSGFPVTVVKATDEDFGEFGTITYSIHSELLSEIFKIDKTSGKLTTKVRLDREK 2605
Query: 60 ------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
GG ++ V I+V + NDN P L Y I N S + +++ A
Sbjct: 2606 QKLYEVLIMATDGGGKSGFITVRIKVADENDNAPYFLLKEYQTSIHYNYSLNVLFLRVKA 2665
Query: 108 SDGDLDPDQRISYKI 122
D D P +I Y+I
Sbjct: 2666 VDPDEGPAAQIRYQI 2680
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 9 AQIVENQSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
A+I N+S L +V+L A D DL + ++ Y IS G+ S F +D+ +
Sbjct: 750 AEIKVNESVALGTTLVKLKARDRDLGYNGKLIYGISGGDKHSQFCVDMDTGELKVIGYLD 809
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DL ++ I V +VNDN P+ + ++ EN I
Sbjct: 810 RERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFERSLASFRVTENALNGTAI 869
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ A+D D + +++Y + + F +D +G L
Sbjct: 870 FRANATDADAGDNAKVTYSLITDTRD--FAVDRTTGVLA 906
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y A+I E+ I+Q+ A+D D D + +++Y I G+ F ID + +L
Sbjct: 3375 YSARIREDAQIGDKILQVIATDLDSDRNGKVTYSIIRGDDREQFEIDPDSGYVSVAEELD 3434
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y++ + I++ + NDN P+ Y I E++ PI
Sbjct: 3435 RETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNYTTVIQEDKPIGYPI 3494
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+Q +D D P+ ++ +GN + F ++
Sbjct: 3495 IQFKITDADTAPNTEPYTFDFRSGNDGNSFRLE 3527
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 61 GPDQVYL----IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GPD L +V I + ++NDN P P Y +I E+ + + ASD DL D
Sbjct: 932 GPDNPPLYSEALVRISIDDINDNAPKFSLPAYTVKIREDIPKGSVVAVVTASDPDLGSDG 991
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y + + + F ID SG++
Sbjct: 992 EVVYFLEDSDSDGTFKIDRLSGTI 1015
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++++ A D D D I Y I G+ F ID +
Sbjct: 1050 VMKITAQDEDKGRDGEIRYSIRDGSGLGIFTIDEDTGVIRTQELLDHETVPHYWLTVYAT 1109
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P ++ VYI+VQ+VNDN P T +PVYY ++E+ + I+Q+ A D D +
Sbjct: 1110 DRGVVPLSSFVEVYIEVQDVNDNAPQTSEPVYYPSVMESSPKDVSIIQIEAFDPDTKSSE 1169
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++SYKI++GNP+ +F+I+ +G
Sbjct: 1170 KLSYKITSGNPQGFFSINQKTG 1191
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT-- 59
T +PVYY ++E+ + I+Q+ A D D +++SYKI++GNP+ +F+I+ + L
Sbjct: 1136 TSEPVYYPSVMESSPKDVSIIQIEAFDPDTKSSEKLSYKITSGNPQGFFSINQKTGLVTT 1195
Query: 60 ----------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQI---- 92
G P + + V ++V + NDN P ++ VY ++
Sbjct: 1196 TSRKLDREQQDEHILEITVSDQGVPAKSTTVRVIVKVLDENDNSPQFMEKVYKIKLPVRE 1255
Query: 93 -VENQSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + + P+ ++ ASD D P+ ISY I G+ + F I+ +G
Sbjct: 1256 KPEKERALKRDPVYRVIASDKDEGPNAEISYSIEEGDEQGKFFIEPKTG 1304
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGS------- 56
+Y A + E +++++A+D D ++ + Y+I +S YF+ID +
Sbjct: 2284 LYNASLSEASVIGTSVLEVSATDADTGNNKVLFYQIVEDKDKSFDYFSIDRDTGTIWTTR 2343
Query: 57 --DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D P LI V I V ++NDN P+ VY A + E
Sbjct: 2344 MLDHEEKPSHRLLIRAVDGGVPALSSEVMVLIDVMDLNDNTPVFSQNVYEATVSELAPRG 2403
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ ASD D+ ++ + I +GN F +D +G+L
Sbjct: 2404 HFVTQVQASDADISDSGKLEFSILSGNEGQNFAMDPNTGAL 2444
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 27/148 (18%)
Query: 17 GILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + + ++ISY I+ G+P F I+
Sbjct: 2933 GVIAI--LSTTDLDTEENNKQISYFITGGDPLGQFAIEHTQGEWKVSVRKPLDREEKDNY 2990
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G +V ++V + +DN P+ Y + E+ I+Q++A+D D+
Sbjct: 2991 LLNITATDGTFTAKAVVEVKVLDASDNSPICEKSFYMESVPEDSPAGRLILQVSATDADI 3050
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +ISY++ G +F+ID +G L
Sbjct: 3051 RSNAQISYEL-LGPGSEHFSIDSETGEL 3077
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 25/125 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD----------------------L 58
I+Q++A+D D+ + +ISY++ G +F+ID + L
Sbjct: 3040 ILQVSATDADIRSNAQISYEL-LGPGSEHFSIDSETGELKTLLPLDREEEEVHKMKVRAL 3098
Query: 59 TGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
GG V I V++VNDN P T DP Y + EN P+ +L ASD D +
Sbjct: 3099 DGGGRFCEAEVEITVEDVNDNPPQFTTDP-YTFTVFENTEINTPVARLYASDLDTGANAE 3157
Query: 118 ISYKI 122
I Y +
Sbjct: 3158 IMYSL 3162
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL----------DPDQRISYKISAG------------ 44
Y +I EN + PIV + A+D + DP + + + G
Sbjct: 2184 YSPEIPENIQLLTPIVHIQANDSEGPRMFTDHRRGDPLNQFTINFNTGVIQVVKTLDFET 2243
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+P ++ LTG +V+ V I +++VNDN P+ +Y A + E +++
Sbjct: 2244 HPAYKLSVRATDSLTGAKAEVF--VDIILEDVNDNPPVFHTKLYNASLSEASVIGTSVLE 2301
Query: 105 LAASDGDLDPDQRISYKISAGNPES--YFNIDIGSGSL 140
++A+D D ++ + Y+I +S YF+ID +G++
Sbjct: 2302 VSATDADTGNNKVLFYQIVEDKDKSFDYFSIDRDTGTI 2339
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + VQ+ NDN P Y ++ E+ + ++Q++A D D + I Y I +GN
Sbjct: 1545 VIVNVQDTNDNAPWFSGAPYVGRVFESAATGSAVLQVSALDKDKGQNAEIIYSIESGNVA 1604
Query: 129 SYFNID 134
+ F ID
Sbjct: 1605 NSFAID 1610
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------- 55
L Y +I E+ + ++Q+ A D DL + + Y I A + + + G
Sbjct: 820 LKETYSVEISESSTVGTEVIQVEAKDKDLGDNGVVRYSILADTDQFAIDTETGIVTVKKP 879
Query: 56 ----------------SDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
T P V +++ I +++VNDN P + P Y+ ++ E+
Sbjct: 880 LDREVQPVFVLKIAARDQATAEPQLVSTVLLKITLEDVNDNPPKFIPPNYHVRVREDLPI 939
Query: 99 ILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
I+ L A D D+ P ++ Y I +G+ + F +D SG++
Sbjct: 940 GTVIMWLEAHDPDVGPSSQVRYSLIDSGDGK--FEVDKLSGAV 980
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 5 PVYYAQIVEN--QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
PV+Y+ + N +S + + S G L D+++ ++ + + S+ G
Sbjct: 2729 PVFYSLVKGNTPESNQDEVFVVDPSSGSLKLDKKLDHESTKW---YQLTLQAQSEYEGSK 2785
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD----------L 112
+ + IQV++VNDN P+ Y A +VEN G ++Q+ A+D D L
Sbjct: 2786 VVSAVDISIQVKDVNDNRPLFESNPYEAFVVENLPGGTCVIQVKATDLDSGTNGHVVYNL 2845
Query: 113 DPDQ 116
DP+Q
Sbjct: 2846 DPNQ 2849
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEVTGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D
Sbjct: 1114 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVQIEAFDPDSSSSD 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I +G
Sbjct: 1174 KLTYKITSGNPQGFFSIHPKTG 1195
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D +++YKI++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIIENSPKDVSVVQIEAFDPDSSSSDKLTYKITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGTPPRSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1259
Query: 97 SG-------ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1260 KADGERSVKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1308
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------ 59
P++Q+ A+D D +P++ +SY++ + +S+ F+ID + L
Sbjct: 2302 PVLQVKATDSDSEPNRGVSYQMFGNHSKSHDHFHIDSNTGLISLVRALDYEQFQQHKVFV 2361
Query: 60 ----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
GG P +IV + V ++NDN P+ +Y A+I E+ + ++ + A D D
Sbjct: 2362 RAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEAKISEHAAHGHFVMCVKACDADSS 2421
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F ID +G
Sbjct: 2422 DLDKLEYSILSGNDHKSFVIDSETG 2446
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 YSAEIPENIQMHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAPLD 2244
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + Y + E P
Sbjct: 2245 FESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQQSYTTTLSEAAVIGTP 2302
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ +SY++ + +S +F+ID +G
Sbjct: 2303 VLQVKATDSDSEPNRGVSYQMFGNHSKSHDHFHIDSNTG 2341
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I + A+D D + ++ Y IS GN +S F ID+ S +
Sbjct: 737 IAFMNATDLDSGFNGKLVYAISGGNDDSCFTIDMESGMLKVLSPLDREVTDKYTLNITVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQRAAWRLLDVTVLDANDNPPEFLQESYFVEVSEDKEVNSEIIQVEATDKDLGPSG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++Y I F+ID +G
Sbjct: 857 HVTYSILTDTDR--FSIDSATG 876
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAG------- 44
L Y+ ++ E++ I+Q+ A+D DL P ++Y I + G
Sbjct: 824 LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYSILTDTDRFSIDSATGVVRIIQP 883
Query: 45 -----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ T P +++ V ++V +VNDN P + P Y ++ E+
Sbjct: 884 LDREVQPVHYLKIEARDQATEEP-RLFSTVLLKVSLDDVNDNPPKFIPPNYSVKVREDLP 942
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D+ ++ Y + + E +F++D SG++
Sbjct: 943 EGTIIMWLEAYDPDVGQSSQVRYSL-LDHGEGHFDVDKLSGAV 984
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLAPLDREEQAVYNLLVKATD 3102
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRSCQATIVLTLEDVNDNAPEFTADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3161
Query: 119 SYKI 122
SY +
Sbjct: 3162 SYSL 3165
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 30/141 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F++D TG + YL V
Sbjct: 3250 VLQVYAASRDIEANAEITYSIISGNEHGKFSMD---SKTGAIFIIENLDYESSHEYYLTV 3306
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y + E+ + ++ + A D D
Sbjct: 3307 EATDGGTPSLSDVATVNINVSDINDNTPVFSQDTYTTVVGEDAALEQSVITIMADDADGP 3366
Query: 114 PDQRISYKISAGNPESYFNID 134
+ I Y I GN S F ID
Sbjct: 3367 SNSHIRYSIIEGNQGSPFTID 3387
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++ND P+ P+Y A ++ + I+ + A+D D P ++ Y I+ GN
Sbjct: 1866 VTIHVIDINDCPPVFSKPLYEASLLLPTYKGVKIITVNATDADSRPFSQLIYSITEGNIG 1925
Query: 129 SYFNIDIGSGSL 140
F++D +G++
Sbjct: 1926 EKFSMDYKTGTI 1937
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY +I EN+ ++ ++A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 943 DFVYEGKIKENKPKGTFVMNVSARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 1002
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQ++N NDN+P+T PVYY + E
Sbjct: 1003 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQLENENDNIPLTDKPVYYVNVTEASLEN 1062
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP+Q ++Y I +GN YF ID +G
Sbjct: 1063 VEIITLKAFDPDIDPNQTLTYNIVSGNLVGYFEIDSKTG 1101
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP+Q ++Y I +GN YF ID +
Sbjct: 1045 LTDKPVYYVNVTEASLENVEIITLKAFDPDIDPNQTLTYNIVSGNLVGYFEIDSKTGVIK 1104
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 1105 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 1164
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 1165 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1209
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2695 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2754
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 2755 TENIQNIFDIDIYSG 2769
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+YI V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN
Sbjct: 1978 IYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYELKKGNG 2036
Query: 128 ESYFNIDIGSGSLG 141
E F +D +G L
Sbjct: 2037 E-LFKLDRKTGELS 2049
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 3039 YSCEILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 3098
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 3099 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPKFLQNLYRVNVNEDIFVGSKI 3158
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+ID +G++
Sbjct: 3159 LDIKATDEDSDINGLVTYNIEKGDNIGQFSIDPKNGTIS 3197
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 2949 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLTVKAED 3008
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 3009 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCEILENATHGTEVCKVYATSIDIGVNAD 3068
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 3069 IHYFIMSGNEQGKFKMDSTTGDL 3091
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1269 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNEDNTFYIGQDNGNILLSKYLDYETK 1325
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1326 QFYNLTISVTDGTFTTLTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1385
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1386 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1417
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 35/164 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISY---KISAGNPESYFNIDI--GSDLTG 60
+Y I EN S I+++ A+D D + ++SY I+ N F ID+ G+
Sbjct: 2197 IYNITIPENSSFGTQILKINATDKDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLK 2256
Query: 61 GP---DQV---YLIV----------------YIQVQNVNDNVPMTLDPVYYAQI----VE 94
P +QV +++V +I V+++NDN P ++P Y+ ++ V
Sbjct: 2257 TPLDYEQVKYHHVVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPSYFTKLSVAAVR 2316
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q LP A D D+ + YKI GN ++ID +G
Sbjct: 2317 GQFVALP----KAYDKDISDTDSLEYKIVYGNELQTYSIDQLTG 2356
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 2714 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 2773
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2774 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENAL 2833
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ L D D++ Q + + I +G+ ++ F I ++G
Sbjct: 2834 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQIGADDFTIG 2876
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 363 YNLTLRAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 422
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 423 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 454
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 401 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 460
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 461 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 520
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 521 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 558
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1114 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSND 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++Y+I++GNP+ +F+I +G
Sbjct: 1174 KLTYRITSGNPQGFFSIHPKTG 1195
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 33/170 (19%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + +++Y+I++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPERE 1259
Query: 97 --------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1260 KADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1309
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2189 YSAEIPENIQMHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVVNVIAPLD 2245
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + P Y + E P
Sbjct: 2246 FESHPAYKLSVRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQPSYSTTLSEASVIGTP 2303
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2304 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTG 2342
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+ P Y + E P++Q+ A+D D +P++ ISY++ + +S+ + I S+ TG
Sbjct: 2286 VQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSN-TGLI 2344
Query: 63 DQVYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVEN 95
V + Y Q Q +NDN P+ VY A+I E+
Sbjct: 2345 SLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEH 2404
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ + A D D ++ Y I +GN F ID +G
Sbjct: 2405 AAHGHFVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETG 2447
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A+D D + ++ Y IS GN +S F ID+ +
Sbjct: 737 ILFMNATDLDSGFNGKLVYAISGGNDDSCFTIDMETGVLKVLSPLDREVMDKYTLNITVY 796
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSEIIQVEATDKDLGPSG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++Y I + F+ID +G
Sbjct: 857 HVTYAILTDTEK--FSIDSMTG 876
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID I S + YL V
Sbjct: 3251 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEAT 3310
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y + E+ + P++ + A D D +
Sbjct: 3311 DGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNS 3370
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3371 HIHYSIIEGNQGSPFTID 3388
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3044 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATD 3103
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T +P Y + EN P+ ++ A+D D +++I
Sbjct: 3104 GGGRSCQAAIVLTLEDVNDNAPEFTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKI 3162
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY + + + F+I+ SG
Sbjct: 3163 SYSL-VESADGQFSINERSG 3181
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P ++Y I
Sbjct: 824 LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQP 883
Query: 46 ------PESYFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ T P +++ V ++V +VNDN P + P Y ++ E+
Sbjct: 884 LDREVQPVHYLKIEARDQATEEP-RLFSTVLLKVSLDDVNDNPPRFIPPNYSVKVREDLP 942
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D+ ++ Y + + E +F++D SG++
Sbjct: 943 EGTIIMWLEAYDPDVGQSSQVRYSL-LDHGEGHFDVDKLSGAV 984
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
T +P Y + EN P+ ++ A+D D +++ISY + + + F+I+ S +
Sbjct: 3127 FTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKISYSL-VESADGQFSINERSGIIQ 3184
Query: 59 ---------------------TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3185 LEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSED 3244
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3245 IVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAI 3289
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y + E+ + P++ + A D D + I Y I GN S F ID
Sbjct: 3341 TYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPL 3400
Query: 54 -----IGSDLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G LT G P +V V I V +VNDN P+ Y I EN+
Sbjct: 3401 DRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFS 3460
Query: 102 IVQLAASDGDLDPD-QRISYKISAGNPESYFNID 134
+++L +D D + + I +GN E+ F ++
Sbjct: 3461 VLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVN 3494
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2797 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSL 2850
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ VYIQVQ+VNDN P T +PVYY + EN + I+Q+ A D D+ +++YK
Sbjct: 1116 PLSAFVEVYIQVQDVNDNAPQTSEPVYYPSVTENSPKDVSIIQINAVDPDVIASDKLTYK 1175
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F I+ +G
Sbjct: 1176 ITSGNPQGFFAINTKTG 1192
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY + EN + I+Q+ A D D+ +++YKI++GNP+ +F I+ + L
Sbjct: 1137 TSEPVYYPSVTENSPKDVSIIQINAVDPDVIASDKLTYKITSGNPQGFFAINTKTGLITT 1196
Query: 62 ----------------------PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P + L+ V + V + NDN P + Y ++ E+ +
Sbjct: 1197 TSRRLDREQQDEHILEVRDQDIPVKRNLVRVIVNVDDTNDNAPWFIGIPYSGRVFESAAI 1256
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++Q+ A D D + + Y I +GN + F ID
Sbjct: 1257 GTAVLQVTALDKDTGHNAEVVYSIESGNVANCFAID 1292
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y +I EN P++ + A+D + RI Y IS G+P F+ID +
Sbjct: 2113 PFYSIEIPENIQLHSPVLHVQANDSE---GPRIVYTISEGDPFKQFSIDFNTGVIHVIQP 2169
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V++ V ++ ++NDN P+ L YYA I E
Sbjct: 2170 LDFETHPAYKLNVRATDSLTGAHSDVFVDVILE--DINDNTPVFLSRSYYANISEASVIG 2227
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
++Q+ A D D +Q I Y++ G +YF ID G
Sbjct: 2228 TSVLQVEAKDSDTGNNQEIFYQLVDEKGKSSNYFIIDRDKG 2268
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLT- 59
L YYA I E ++Q+ A D D +Q I Y++ G +YF ID +
Sbjct: 2212 LSRSYYANISEASVIGTSVLQVEAKDSDTGNNQEIFYQLVDEKGKSSNYFIIDRDKGIIS 2271
Query: 60 ---------------------GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
GG + + V I V ++NDN PM + +Y + E
Sbjct: 2272 LAQVLDHEDIQQHKLRARVVDGGVPALSSEVTVTIDVTDLNDNAPMFTEFIYNTTVSELA 2331
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ ASD D +++ + I +GN E F I+ +G++
Sbjct: 2332 PRGHFVIQVQASDPDSSDTKKLEFAIISGNDEQNFAINKQTGTI 2375
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI---- 68
P+V + ASD D D + R+ Y+I +YF ID I + L V+
Sbjct: 1719 PLV-IHASDADCDQNARLIYQIVEPYAHNYFAIDSSTGAIRITTTLDYEERSVFHFTVQV 1777
Query: 69 ---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
V I V +VND P VY A IV + ++Q+ A+D D
Sbjct: 1778 HDLGMPRLFAETAANVTINVIDVNDCSPSFTQEVYEAVIVLPTYKGVEVIQVNATDSDSG 1837
Query: 114 PDQRISYKISAGNPESYFNID 134
P+ ++ + IS GN F I+
Sbjct: 1838 PNSKLLFSISEGNIGDKFKIE 1858
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V+ VN +P+ P Y +I EN P++ + A+D + RI Y IS G+P
Sbjct: 2096 VEVPVRVVNKAIPIFERPFYSIEIPENIQLHSPVLHVQANDSE---GPRIVYTISEGDPF 2152
Query: 129 SYFNIDIGSG 138
F+ID +G
Sbjct: 2153 KQFSIDFNTG 2162
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A + E+ + ++++ A+ D + + ISY I +GN F++D S
Sbjct: 3164 YTATVPEDVAVGAQLLRVQAASRDKEANAEISYSIISGNEHGMFSVDARSGDIFVIEPLD 3223
Query: 57 -----------DLTGG---PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ T G P V I + +VNDN P+ VY A I E+ +
Sbjct: 3224 YETSHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYAAVISEDVELGKTV 3283
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + Y I GN S F ID G L
Sbjct: 3284 LAVMAEDFDGPSYDHVQYSIVDGNQGSPFTIDPLRGEL 3321
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
LDP Y + EN + +L A+D D + I Y + + + F++D S
Sbjct: 3055 FALDP-YTITVFENTETGTFVAKLLANDADAGLNSDILYSL-INSADGSFSVDENSGVIS 3112
Query: 57 -------------DLT------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+LT G P L V + + ++NDN P+ Y A + E+
Sbjct: 3113 LERPLDREVQSVYELTAQAIDRGSPRLSSLCTVTVSILDINDNPPVFEHREYTATVPEDV 3172
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+ D + + ISY I +GN F++D SG +
Sbjct: 3173 AVGAQLLRVQAASRDKEANAEISYSIISGNEHGMFSVDARSGDI 3216
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF-NIDIGSDLTGGP-------DQVYLI---- 68
I+Q++A+D D+ + +IS+++ E + + D G T P + + +
Sbjct: 2972 ILQVSATDADIRSNAQISFELQGVGAELFIIDSDTGELKTSRPLDREKQEEHRFKVRAVD 3031
Query: 69 ---------VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
++I V++VNDN P+ LDP Y + EN + +L A+D D + I
Sbjct: 3032 GGGRYCEADIHITVEDVNDNPPLFALDP-YTITVFENTETGTFVAKLLANDADAGLNSDI 3090
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + + F++D SG
Sbjct: 3091 LYSL-INSADGSFSVDENSG 3109
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1053 VMTVSARDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTVYAA 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1113 DRGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVQIEAFDPDSSSND 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++ YKI++GNP+ +F+I +G
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTG 1194
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIIENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 RPERERNAKREPIYRVIATDKDDGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A++ EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEVPENIQMHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ + Y + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQQSYATTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2300 TSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN I+ L A+D D + ++ Y IS GN +S F ID+
Sbjct: 725 EVKENHPVGSNIIVLNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVSDLGIPQKAAWRLIDIRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSMTG 875
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I ++Q+ A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2288 YATTLSEASVIGTSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRA 2347
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2348 LDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHAIHGH 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2408 FVTCVKAYDADSSDIDKLDYSILSGNDHKNFVIDSETG 2445
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3250 VLQVYAASRDIEANAEITYSIISGNEHGKFSID---SKTGAIFIIETLDYESSHEYYLTV 3306
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y A I E+ ++ + A D D
Sbjct: 3307 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDALLEQSVITVMADDTDGP 3366
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ RI Y I GN S F ID G +
Sbjct: 3367 SNSRIRYSIIDGNQGSPFTIDPAKGEV 3393
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + F+ID +TG
Sbjct: 823 LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSILTDTDK--FSID---SMTGVV 877
Query: 63 DQVY-----------------------------LIVYIQVQNVNDNVPMTLDPVYYAQIV 93
VY +++ + +++VNDN P + P Y ++
Sbjct: 878 KIVYPLDREVQQVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFIPPNYRVKVR 937
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E+ I+ L A D DL ++ Y + + E +F++D SG++
Sbjct: 938 EDLPEGTIIMWLEAYDPDLGQSSQVRYSL-LDHGEGHFDVDKLSGAV 983
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-----DQVYLI------ 68
I+Q++A+D D+ + I+Y + E + N D G T P +VY +
Sbjct: 3042 IMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLAPLDREEQEVYNLLVKATD 3101
Query: 69 ---------VYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQR 117
+ + V++VNDN P + DP Y + EN P+ ++ A+D D +++
Sbjct: 3102 GGGRFCEANIVLTVEDVNDNAPEFSADP-YTITVFENTEPGTPLTRVQATDADAGXLNRK 3160
Query: 118 ISYKI 122
ISY +
Sbjct: 3161 ISYSL 3165
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1114 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSND 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++Y+I++GNP+ +F+I +G
Sbjct: 1174 KLTYRITSGNPQGFFSIHPKTG 1195
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 33/170 (19%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + +++Y+I++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPERE 1259
Query: 97 --------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1260 KADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1309
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2189 YSAEIPENIQMHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVVNVIAPLD 2245
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + P Y + E P
Sbjct: 2246 FESHPAYKLSVRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQPSYSTTLSEASVIGTP 2303
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2304 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTG 2342
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A+D D + ++ Y IS GN +S F ID+ +
Sbjct: 737 ILFMNATDLDSGFNGKLVYAISGGNDDSCFTIDMETGVLKVLSPLDREVMDKYTLNITVY 796
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQKAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSEIIQVEATDKDLGPSG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++Y I + F+ID +G
Sbjct: 857 HVTYAILTDTEK--FSIDSMTG 876
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+ P Y + E P++Q+ A+D D +P++ ISY++ + +S+ + I S+ TG
Sbjct: 2286 VQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSN-TGLI 2344
Query: 63 DQVYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVEN 95
V + Y Q Q +NDN P+ VY A+I E+
Sbjct: 2345 SLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEH 2404
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ + A D D ++ Y I +GN F ID +G
Sbjct: 2405 AAHGHFVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETG 2447
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID I S + YL V
Sbjct: 3251 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEAT 3310
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y + E+ + P++ + A D D +
Sbjct: 3311 DGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNS 3370
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3371 HIHYSIIEGNQGSPFTID 3388
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3044 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATD 3103
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T +P Y + EN P+ ++ A+D D +++I
Sbjct: 3104 GGGRSCQAAIVLTLEDVNDNAPEFTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKI 3162
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY + + + F+I+ SG
Sbjct: 3163 SYSL-VESADGQFSINERSG 3181
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P ++Y I
Sbjct: 824 LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQP 883
Query: 46 ------PESYFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ T P +++ V ++V +VNDN P + P Y ++ E+
Sbjct: 884 LDREVQPVHYLKIEARDQATEEP-RLFSTVLLKVSLDDVNDNPPRFIPPNYSVKVREDLP 942
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D+ ++ Y + + E +F++D SG++
Sbjct: 943 EGTIIMWLEAYDPDVGQSSQVRYSL-LDHGEGHFDVDKLSGAV 984
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
T +P Y + EN P+ ++ A+D D +++ISY + + + F+I+ S +
Sbjct: 3127 FTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKISYSL-VESADGQFSINERSGIIQ 3184
Query: 59 ---------------------TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3185 LEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSED 3244
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3245 IVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAI 3289
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y + E+ + P++ + A D D + I Y I GN S F ID
Sbjct: 3341 TYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPL 3400
Query: 54 -----IGSDLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G LT G P +V V I V +VNDN P+ Y I EN+
Sbjct: 3401 DRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFS 3460
Query: 102 IVQLAASDGDLDPD-QRISYKISAGNPESYFNID 134
+++L +D D + + I +GN E+ F ++
Sbjct: 3461 VLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVN 3494
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2797 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSL 2850
>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
Length = 3884
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY +I EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 285 DFVYEGKIKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 344
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 345 QLDAETKNFYWLTLCAQDCAIVPLSNCAEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 404
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP + I+Y I +GN YF ID +G
Sbjct: 405 VEIITLKAYDPDIDPTKTITYNIISGNLVGYFEIDSKTG 443
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T PVYY + E + I+ L A D D+DP + I+Y I +GN YF ID + L
Sbjct: 387 LTDKPVYYVNVTEASVENVEIITLKAYDPDIDPTKTITYNIISGNLVGYFEIDSKTGLIK 446
Query: 61 GPDQV--------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
++ +++ + + V ++NDN P VY Q+ +
Sbjct: 447 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNGPEFDQRVYKVQVPSS 506
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 507 AAVNQSIYQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 551
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2038 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2097
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI +G
Sbjct: 2098 TENIQNIFDIDIYTG 2112
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 611 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNEDNTFYIGQDNGNILLSKYLDYETK 667
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 668 QSYNLTISVTDGTFTTFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 727
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 728 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 759
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 2383 ITKVHAMDKDFGLNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLTVKAED 2442
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + +VNDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 2443 CGVPKLHSIATVAVNILDVNDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 2502
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 2503 IHYFIMSGNEQGKFKMDSTTGDL 2525
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 2473 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 2532
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 2533 YEMSKFYFLTIQAIDGGSPPLSNNAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKI 2592
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+I+ +G++
Sbjct: 2593 LDIKATDEDSDVNGLVTYNIEKGDNIGQFSIEPKNGTIS 2631
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI +
Sbjct: 2057 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYTGWITL 2116
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2117 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLAVFENAL 2176
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I++G+ ++ F I
Sbjct: 2177 PGTVLINLLLIDPDIEK-QEMDFFIASGDKQAQFQI 2211
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI----VENQSGILPIVQLAASDGDLDPDQRISYKISA 124
V+I V+++NDN P ++P Y+ ++ V Q LP A D D+ + YKI
Sbjct: 1630 VFITVKDLNDNTPCFVEPSYFTKLSVAAVRGQFVALP----KAYDKDISDTDSLEYKIVY 1685
Query: 125 GNPESYFNIDIGSG 138
GN ++ID +G
Sbjct: 1686 GNELQTYSIDKLTG 1699
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN E
Sbjct: 1323 ISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYELKKGNGE- 1380
Query: 130 YFNIDIGSGSLG 141
F +D +G L
Sbjct: 1381 LFKLDRKTGELS 1392
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D
Sbjct: 1114 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSD 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++Y+I++GNP+ +F+I +G
Sbjct: 1174 KLTYRITSGNPQGFFSIHPKTG 1195
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D +++Y+I++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSDKLTYRITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPERE 1259
Query: 97 SG-------ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1260 KADGDRSAKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1308
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 YSAEIPENVQTHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAPLD 2244
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + Y + E P
Sbjct: 2245 FESHPAYKLSIRATDSLTGAHAEVF--VDIVVEDINDNPPVFVQQSYSTTLSEASVIGAP 2302
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
I+Q+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2303 ILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTG 2341
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQN---- 75
PI+Q+ A+D D +P++ ISY++ + +S+ + I S TG V + Y Q Q
Sbjct: 2302 PILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSH-TGLISLVRALDYEQFQQHKLL 2360
Query: 76 -----------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+NDN P+ VY A+I E+ + ++ + A D D
Sbjct: 2361 VRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGHFVMCVKACDADR 2420
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN F ID +G
Sbjct: 2421 SDLDRLEYSILSGNDHKSFVIDGETG 2446
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYHLLVKATD 3102
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T DP Y + EN P+ ++ A+D D +++I
Sbjct: 3103 GGGRSCQATIVLTLEDVNDNTPEFTADP-YAITVFENTEPGTPLTRVQATDADAGLNRKI 3161
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
SY + + + F+I+ SG L
Sbjct: 3162 SYSL-LDSADGQFSINEQSGIL 3182
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I+ + A+D D + ++ Y IS GN +S F +D+ + +
Sbjct: 737 ILFMNATDLDSGFNGKLVYAISGGNDDSCFTVDMETGMLKVLSPLDREVTDKYTLNITVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEINSEIIQVEATDKDLGPSG 856
Query: 117 RISYKI 122
++Y I
Sbjct: 857 HVTYAI 862
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNP------------ 46
T DP Y + EN P+ ++ A+D D +++ISY + SA
Sbjct: 3126 FTADP-YAITVFENTEPGTPLTRVQATDADAGLNRKISYSLLDSADGQFSINEQSGILQL 3184
Query: 47 --------ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
++ + + + + G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3185 EKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREYGATVSEDI 3244
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3245 VIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAI 3288
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------IGSDLT---- 59
++Q+ A+ D++ + I+Y I +GN F+ID G LT
Sbjct: 3250 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEAT 3309
Query: 60 -GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG + V I + ++NDN P+ Y + E+ + P++ + A D D +
Sbjct: 3310 DGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPVITIMADDADGPSNS 3369
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3370 HILYSIIEGNQGSPFTIDPVRGEI 3393
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + E+ + P++ + A D D + I Y I GN S F ID
Sbjct: 3341 YTTVVSEDAALEQPVITIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLD 3400
Query: 54 ----IGSDLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G LT G P +V V I V +VNDN P+ Y I EN+ +
Sbjct: 3401 RETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSV 3460
Query: 103 VQLAASDGDLDPD-QRISYKISAGNPESYFNID 134
++L +D D + S+ I +GN ++ F ++
Sbjct: 3461 LKLVVTDKDSSHNGPPFSFAIVSGNDDNMFEVN 3493
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D
Sbjct: 1114 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSD 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++Y+I++GNP+ +F+I +G
Sbjct: 1174 KLTYRITSGNPQGFFSIHPKTG 1195
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D +++Y+I++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSDKLTYRITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPERE 1259
Query: 97 SG-------ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1260 KADGDRSAKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1308
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 YSAEIPENVQTHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAPLD 2244
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + Y + E P
Sbjct: 2245 FESHPAYKLSIRATDSLTGAHAEVF--VDIVVEDINDNPPVFVQQSYSTTLSEASVIGAP 2302
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
I+Q+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2303 ILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTG 2341
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQN---- 75
PI+Q+ A+D D +P++ ISY++ + +S+ + I S TG V + Y Q Q
Sbjct: 2302 PILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSH-TGLISLVRALDYEQFQQHKLL 2360
Query: 76 -----------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+NDN P+ VY A+I E+ + ++ + A D D
Sbjct: 2361 VRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGHFVMCVKACDADR 2420
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN F ID +G
Sbjct: 2421 SDLDRLEYSILSGNDHKSFVIDGETG 2446
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYHLLVKATD 3102
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T DP Y + EN P+ ++ A+D D +++I
Sbjct: 3103 GGGRSCQATIVLTLEDVNDNTPEFTADP-YAITVFENTEPGTPLTRVQATDADAGLNRKI 3161
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
SY + + + F+I+ SG L
Sbjct: 3162 SYSL-LDSADGQFSINEQSGIL 3182
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I+ + A+D D + ++ Y IS GN +S F +D+ + +
Sbjct: 737 ILFMNATDLDSGFNGKLVYAISGGNDDSCFTVDMETGMLKVLSPLDREVTDKYTLNITVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEINSEIIQVEATDKDLGPSG 856
Query: 117 RISYKI 122
++Y I
Sbjct: 857 HVTYAI 862
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNP------------ 46
T DP Y + EN P+ ++ A+D D +++ISY + SA
Sbjct: 3126 FTADP-YAITVFENTEPGTPLTRVQATDADAGLNRKISYSLLDSADGQFSINEQSGILQL 3184
Query: 47 --------ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
++ + + + + G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3185 EKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREYGATVSEDI 3244
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3245 VIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAI 3288
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------IGSDLT---- 59
++Q+ A+ D++ + I+Y I +GN F+ID G LT
Sbjct: 3250 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEAT 3309
Query: 60 -GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG + V I + ++NDN P+ Y + E+ + P++ + A D D +
Sbjct: 3310 DGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPVITIMADDADGPSNS 3369
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F ID G +
Sbjct: 3370 HILYSIIEGNQGSPFTIDPVRGEI 3393
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + E+ + P++ + A D D + I Y I GN S F ID
Sbjct: 3341 YTTVVSEDAALEQPVITIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLD 3400
Query: 54 ----IGSDLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G LT G P +V V I V +VNDN P+ Y I EN+ +
Sbjct: 3401 RETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSV 3460
Query: 103 VQLAASDGDLDPD-QRISYKISAGNPESYFNID 134
++L +D D + S+ I +GN ++ F ++
Sbjct: 3461 LKLVVTDKDSSHNGPPFSFAIVSGNDDNMFEVN 3493
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ +AA D D D I Y I G+ F I + + D++
Sbjct: 1053 VMTVAAQDEDAGRDGEIRYSIRDGSGVGVFRIGEETGVIETSDRLDRESTSHYWLTVFAT 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D D
Sbjct: 1113 DQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDD 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++Y+I++GNP+ +F+I +G
Sbjct: 1173 KLTYRITSGNPQGFFSIHPKTG 1194
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D D +++Y+I++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSDDKLTYRITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPVYRVIATDRDEGPNAEISYSIEDGNEHGRFFIEPKTG 1307
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + + +F+ID + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNLSKSQDHFHIDSSTGLISLLRTLDYERSRQHTILVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN+P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSEVIVTVDVTDLNDNLPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 VGKLQYSILSGNDHKHFVIDGATG 2445
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F ++ +
Sbjct: 2185 PFYSAEIPENIQVHSPVVHVQANSPE---GLKVFYSIADGDPFSQFTVNFNTGVVSVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + + +F+ID +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNLSKSQDHFHIDSSTG 2340
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ ENQ ++ + A+D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 RVKENQPVGSSVILMNATDLDTGFNGKLVYAVSGGNEDSCFIIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVIDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ R++Y + F+ID +G
Sbjct: 845 EATDKDLGPNGRVTYSVLTDT--DMFSIDSTAG 875
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAG------- 44
L Y+ ++ E++ I+Q+ A+D DL P+ R++Y + +AG
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGRVTYSVLTDTDMFSIDSTAGVVKILQP 882
Query: 45 -----NPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDREVQPVHYLKIEARDQAREEP-QLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAYDPDLGQSGQVRYSL-VDHGEGNFDVDKLSGAV 983
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y A I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPLNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNRGSSFTID 3386
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + N D G T P D+ VY
Sbjct: 3042 IMQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSAPLDREEQAVYHLLVRATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3102 GGGRFCEASIVLTLEDVNDNAPEFSADP-YAITVFENTEPGTLLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
>gi|312377972|gb|EFR24670.1| hypothetical protein AND_10581 [Anopheles darlingi]
Length = 199
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
SY+ D P + VYI+V+N NDNVP+T VYY + E ++QL A
Sbjct: 11 SYWLTVCAQDQASVPLHSCVQVYIEVENENDNVPLTEQAVYYLSVKEGSPPGTEVLQLVA 70
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D+DP Q+ISY+I++GNP +F I+ SG
Sbjct: 71 EDRDIDPLQQISYRITSGNPVEHFVINSTSG 101
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T VYY + E ++QL A D D+DP Q+ISY+I++GNP +F I+ S
Sbjct: 45 LTEQAVYYLSVKEGSPPGTEVLQLVAEDRDIDPLQQISYRITSGNPVEHFVINSTSGLIT 104
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D P+ + + V +QV+++ND+ P +Y QI N
Sbjct: 105 TTTRKLDRETQPEHILEVLVMDNGEPQLSSTTRVVVQVEDINDHPPEFEQKMYKVQIPAN 164
Query: 96 QSGILPIVQL 105
P+ Q
Sbjct: 165 ARIDQPLFQC 174
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1053 VMAVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTVYAT 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +++EN + +VQ+ A D D +
Sbjct: 1113 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIQAFDPDSSSND 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F I +G
Sbjct: 1173 KLTYKITSGNPQGFFAIHPKTG 1194
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D + +++YKI++GNP+ +F I + L
Sbjct: 1139 TSEPVYYPEVMENSPKDVSVVQIQAFDPDSSSNDKLTYKITSGNPQGFFAIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIPENIQIHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ + Y A + E
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2300 TSVVQVKATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2340
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN I+ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 725 EVKENHPVGSNIISMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 784
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNISVSDLGIPQKAAWHLLDIRVLDANDNPPEFLQERYFVEVSEDKEINSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ R++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGRVTYSILTDTDK--FSIDSMTG 875
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTG------------------ 60
+VQ+ A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2302 VVQVKATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVR 2361
Query: 61 ------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
P +IV + V ++NDN P+ +Y A+I E+ + + + A D D
Sbjct: 2362 AVDSGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHATHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F ID +G
Sbjct: 2422 IDKLEYSILSGNDHKNFVIDSETG 2445
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSID---SKTGAIFIIENLDYESSHEYYLTV 3305
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ V ++NDN P+ Y A I E+ ++ + A D D
Sbjct: 3306 EATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMADDADGP 3365
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN F ID G +
Sbjct: 3366 SNSHIHYSIIDGNQGGPFTIDPARGEV 3392
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1049 VMTVSAHDEDPGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTPHYWLTVYAT 1108
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V++VNDN P T +PVYY +++EN + +VQ+ A D D D
Sbjct: 1109 DQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSDD 1168
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++ YKI++GNP+ +F+I +G
Sbjct: 1169 KLMYKITSGNPQGFFSIHPKTG 1190
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +++EN + +VQ+ A D D D ++ YKI++GNP+ +F+I + L
Sbjct: 1135 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSDDKLMYKITSGNPQGFFSIHPKTGLITT 1194
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V +++ + NDN P L Y ++ E +
Sbjct: 1195 TSRKLDREQQDEHILEVTVTDNGSPPRSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1254
Query: 97 -----SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1255 KPERNSKREPLYRVVATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1301
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2179 PFYSAEIPENIQIHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2235
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V+ V I V+++NDN P+ + Y A + E
Sbjct: 2236 LDFEAHPAYKLSIRATDSLTGAHADVF--VDIIVEDINDNAPVFVQQSYAATLSEASVIG 2293
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY++ + +S YF+ID +G
Sbjct: 2294 TSVIQVRATDSDSEPNRGISYQMFGNHSKSQDYFHIDSSTG 2334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ EN I+ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 721 EVKENHPVGSDIIFMNATDLDTGFNGKLVYSISGGNEDSCFVIDMETGMLKILSPLDRET 780
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 781 TDKYTLNVTVYDLGVPQKAAWHLLDIRVLDANDNAPEFLQESYFVEVSEDKELSSEIIQV 840
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 841 EATDKDLGPNGHVTYSI 857
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSDLT----- 59
YA + S I ++Q+ A+D D +P++ ISY++ + +S YF+ID + L
Sbjct: 2282 YAATLSEASVIGTSVIQVRATDSDSEPNRGISYQMFGNHSKSQDYFHIDSSTGLISLVRT 2341
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +I+ + V ++NDN P+ +Y A+I E+
Sbjct: 2342 LDYEQFQQHRISVRAVDGGMPPLSSDVIITVDVTDLNDNPPLFDQQIYEARISEHAPHGH 2401
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2402 FVTCVKACDADSSDVDKLEYSILSGNDHKNFVIDSETG 2439
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--------------- 47
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 819 LQESYFVEVSEDKELSSEIIQVEATDKDLGPNGHVTYSILTDTDRFSIDSVTGVVKIARP 878
Query: 48 --------SYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
Y I+ P Q++ V ++V ++VNDN PM + P Y ++ E+
Sbjct: 879 LDREVQHVHYLKIEARDQAKEEP-QLFSTVLLKVSLEDVNDNPPMFIPPNYRVKVREDLP 937
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 938 EGTIIMWLEAYDPDLGQSSQVRYSL-MDHGEGNFDVDKLSGAI 979
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + N D G T P D+ +Y
Sbjct: 3036 IMQVSATDADIRSNAEITYTLYGSGAEKFKLNPDTGELKTLAPLDREEQAIYNLVVKATD 3095
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN + ++ A+D D +++I
Sbjct: 3096 GGGRFCQANIVLTLEDVNDNAPEFSADP-YTITVFENTEPGTLLTRVQATDADAGLNRKI 3154
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY + + E F+I+ SG
Sbjct: 3155 SYSL-INSAEGQFSINELSG 3173
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1054 VMTVSARDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1114 DQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSND 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++ YKI++GNP+ +F+I +G
Sbjct: 1174 KLMYKITSGNPQGFFSIHPKTG 1195
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRRLDREQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1259
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1260 KPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGRFFIEPKTG 1308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2186 PFYSAEIPENIQVHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ + Y A + E
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQQSYSATLSEASVIG 2300
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2301 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHIDSTTG 2341
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F+ID + L
Sbjct: 2303 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHIDSTTGLISLLRTLDYEQFQQHKIFVR 2362
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2363 AIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHAIHGHFVTCVKAYDADSSD 2422
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN F ID +G
Sbjct: 2423 IDRLEYSILSGNDHKNFVIDSETG 2446
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ ENQ ++ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 726 EVKENQPVGSNVIFMNATDLDSGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 785
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ I + + NDN P L Y+ ++ E++ I+Q+
Sbjct: 786 TDKYTLNMTVYDLGIPQKAAWRLLDIVILDANDNPPEFLQESYFVEVSEDKEINSEIIQV 845
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + ++Y I
Sbjct: 846 EATDKDLGSNGHVTYSI 862
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFN-----IDI 54
T DP Y + EN + ++ A+D D +++ISY I + N + N I +
Sbjct: 3126 FTADP-YTITVFENTEPGTLLTRVQATDADTGLNRKISYSLIDSANGQFSINDISGIIQL 3184
Query: 55 GSDLTGGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
L VY + V + V ++NDN P+ Y A + E+
Sbjct: 3185 EKPLDREQQAVYTLTLKAVDQGLPRRLSATGTVIVSVLDINDNPPVFEYREYGATVSEDV 3244
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3245 LIGTEVLQLYAASRDIEANAEITYSIISGNEHGKFSIDAKTGAI 3288
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + N D G T P D+ VY
Sbjct: 3043 IMQVSATDADIRSNAEITYTLLGSGAEKFRLNPDTGELKTLAPLDREEQAVYNLLVKATD 3102
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P T DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRFCQASIVLTLEDVNDNAPEFTADP-YTITVFENTEPGTLLTRVQATDADTGLNRKI 3161
Query: 119 SYKI 122
SY +
Sbjct: 3162 SYSL 3165
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-----------------LT---- 59
++QL A+ D++ + I+Y I +GN F+ID + LT
Sbjct: 3250 VLQLYAASRDIEANAEITYSIISGNEHGKFSIDAKTGAIFIIENLDYESAHEYYLTVEAT 3309
Query: 60 -GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG + + V I V ++NDN P Y A I E+ ++ + A D D
Sbjct: 3310 DGGTPSLSDVVTVNINVTDINDNTPAFSQDTYTAVISEDAVLEQSVITVMADDADGPLYS 3369
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN F ID G +
Sbjct: 3370 LIHYSIIEGNQGGPFTIDPVKGEV 3393
>gi|355566954|gb|EHH23333.1| hypothetical protein EGK_06782, partial [Macaca mulatta]
Length = 3492
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 50 LTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 109
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 110 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 169
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 170 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 214
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 53/70 (75%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V++VNDN P+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+
Sbjct: 37 VYIEVEDVNDNAPLTSEPIYYPVVMENSPKDISVIQIQAEDPDSSSNEKLTYRITSGNPQ 96
Query: 129 SYFNIDIGSG 138
++F I+I +G
Sbjct: 97 NFFAINIKTG 106
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 1193 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 1252
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 1253 RMLDHELVQHCTLKVRSTDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 1312
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 1313 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 1352
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 455 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 514
Query: 129 SYFNID 134
+ F I+
Sbjct: 515 NTFKIE 520
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 1167 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 1224
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 1225 VHYQIVQDTYNSTDYFHIDSSSG 1247
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 1812 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGN 1871
Query: 127 PESYFNI 133
P F +
Sbjct: 1872 PRGRFAL 1878
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 2144 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 2200
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY I E+
Sbjct: 2201 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSTVISEDALVG 2260
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 2261 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 2295
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 1831 VYRGNVKESDPPGEVVAVLSTWDRDTSDINRQVSYHITGGNPRGRFALGLVQSEWKVYVK 1890
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 1891 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCEQVAYTALLPEDIPSNKI 1950
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 1951 ILKVSAKDADIGSNGDIRYSLYGSGNSE--FFLDPESGEL 1988
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG-------------------- 44
Y A I EN + + ++ A D D+ ++++ Y + SAG
Sbjct: 2039 YNACIYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSSSGIIILEQPLDR 2098
Query: 45 NPESYFNIDI-GSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+S +NI + +D + G L V I V ++NDN P+ Y + E+ S +
Sbjct: 2099 EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQV 2158
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 2159 LAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGI 2196
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 24/143 (16%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IG 55
P++ ++A D D D I Y I G+ F I
Sbjct: 1053 PVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFTIHEEKGTIRTADNLDRETTSHYWLTVYA 1112
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
+D P ++ +YI++++VNDN P T++PVYY +++EN + + +VQ+ A D D
Sbjct: 1113 TDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVMENSAKDVSVVQINAFDPDSISS 1172
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
+++YKIS GNP+ +F I+ +G
Sbjct: 1173 DKLTYKISTGNPQGFFAINPKTG 1195
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T++PVYY +++EN + + +VQ+ A D D +++YKIS GNP+ +F I+ + L
Sbjct: 1140 TVEPVYYPEVMENSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGFFAINPKTGLITT 1199
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V ++V + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQSEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPERE 1259
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A D D + ISY I G+ F I+ +G
Sbjct: 1260 KPERERNAKRDPIYRVVAVDKDDGANAEISYSIEEGDEHGKFFIEPKTG 1308
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------- 56
+P Y A+I EN + P+V + A+ + RI Y I+ G+P + FNI+ +
Sbjct: 2185 NPFYSAEIAENANLHSPVVHVQANSPE---GYRIIYSITDGDPFNQFNINFNTGVINVFA 2241
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
LTG +V+ V I +++VNDN P+ + Y A + E
Sbjct: 2242 PLDFESHPAYKLRVRATDSLTGAHAEVF--VDIILEDVNDNPPVFREKTYAATLSEASVI 2299
Query: 99 ILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
+VQ+ A D D + IS+ + ++GN YF+ID SG
Sbjct: 2300 GTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSG 2341
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A+D D ++ Y IS GN +S F +D+ +
Sbjct: 737 IIHMEANDLDAGFSGKLLYAISGGNDDSCFAVDMETGWLKILSPLDRELKDQYNLNITVY 796
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V +VNDN P L Y + EN+ G I+Q+ A D DL +
Sbjct: 797 DLGIPQKSSWRLLDVNVLDVNDNPPEFLQESYSVHLKENEEGHNAIIQVQAVDKDLGVNG 856
Query: 117 RISYKI 122
+ Y I
Sbjct: 857 EVKYSI 862
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----FNIDIGSDL---- 58
Y I E+ I+Q+AASD D+ + I Y + E + F ++ + L
Sbjct: 3029 YAETISEDALAGRVILQVAASDADIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLDR 3088
Query: 59 -------------TGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQ 104
GG V + +++VNDN P + DP Y + EN P+++
Sbjct: 3089 EILEVYHLMVKATDGGGRFCQAAVELTLEDVNDNAPEFSADP-YTVTVYENTEPQTPLLR 3147
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D DL + ++ Y + + E F+ID SG
Sbjct: 3148 VQAIDADLGLNHKVQYSL-VSSAEGQFSIDELSG 3180
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL--T 59
+ Y A + E +VQ+ A D D + IS+ + ++GN YF+ID S L T
Sbjct: 2286 EKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSGLIET 2345
Query: 60 GGP------DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P + L+V +I + ++NDN P + VY +I E
Sbjct: 2346 AKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQVYEVKISELSK 2405
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D +++ Y I +GN + F I+ +G
Sbjct: 2406 PGHFVTCVKATDADSSDTEKLEYSILSGNDDMNFIINSKTG 2446
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 26/139 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGS-DLTGGPDQVYLIVY- 70
++Q+ A+ D++ + I+YKI +GN F I+ I S D P + YL V
Sbjct: 3250 VLQVYATSRDIEVNAEITYKIISGNEHGKFTINPVTGMIFIIASLDYETSP-EYYLTVEA 3308
Query: 71 ---------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
I V +VNDN P+ Y + E+ ++ + A D D +
Sbjct: 3309 TDGGTPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGPLN 3368
Query: 116 QRISYKISAGNPESYFNID 134
I Y I+ GNP + F ID
Sbjct: 3369 NHIRYSITEGNPGNTFIID 3387
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ YF + D +G P +V + + +N +P+ +P Y A+I EN + P+V +
Sbjct: 2149 KEYFITVVAKD-SGNPSYSSEVV-VPITVMNKAMPVFENPFYSAEIAENANLHSPVVHVQ 2206
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+ + RI Y I+ G+P + FNI+ +G
Sbjct: 2207 ANSPE---GYRIIYSITDGDPFNQFNINFNTG 2235
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + ++ +++ I+ G+P F I+
Sbjct: 2936 GVIAI--LSTTDNDTEEINKEVTFHITGGDPLGQFAIENMQHEWKVYVRKPLDREVKDNY 2993
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G +V ++V + NDN P+ Y I E+ I+Q+AASD D+
Sbjct: 2994 LLNITATDGTFATKAVVEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADI 3053
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y + E F+++ +G L
Sbjct: 3054 RSNAEIIYTLHGVGAEK-FHLNPFTGEL 3080
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 25/139 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLTGG-------- 61
++ + A D D + I Y I+ GNP + F ID + +L G
Sbjct: 3355 VLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELISGYTLTIQAE 3414
Query: 62 -----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD- 115
P + V I V +VNDN PM Y I EN+ I+ LA +D D +
Sbjct: 3415 DNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVIQENKPVGFSILHLAVTDKDSSHNG 3474
Query: 116 QRISYKISAGNPESYFNID 134
++ +GN ++ F +D
Sbjct: 3475 PPFTFVFLSGNEDNTFQMD 3493
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ + I V + ND+ P Y ++ E+ + ++Q++A D D + + Y I +G
Sbjct: 1546 FARIVINVTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVSALDKDKGKNAEVGYSIESG 1605
Query: 126 NPESYFNID 134
N + F ID
Sbjct: 1606 NTANAFTID 1614
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---D 57
+ DP Y + EN P++++ A D DL + ++ Y + + E F+ID S
Sbjct: 3126 FSADP-YTVTVYENTEPQTPLLRVQAIDADLGLNHKVQYSL-VSSAEGQFSIDELSGIIS 3183
Query: 58 LTGGPDQVYLIVY-IQVQ---------------------NVNDNVPMTLDPVYYAQIVEN 95
L D+ VY + V+ ++NDN P+ Y + + E+
Sbjct: 3184 LEKPLDRELQAVYTLTVKATDQGLPRKLSSVASVVVSVLDINDNPPVFEHREYGSSLTED 3243
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A+ D++ + I+YKI +GN F I+ +G
Sbjct: 3244 APVGTEVLQVYATSRDIEVNAEITYKIISGNEHGKFTINPVTG 3286
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 24/143 (16%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IG 55
P++ ++A D D D I Y I G+ F I
Sbjct: 1021 PVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFTIHEEKGTIRTADNLDRETTSHYWLTVYA 1080
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
+D P ++ +YI++++VNDN P T++PVYY +++EN + + +VQ+ A D D
Sbjct: 1081 TDRGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEVMENSAKDVSVVQINAFDPDSISS 1140
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
+++YKIS GNP+ +F I+ +G
Sbjct: 1141 DKLTYKISTGNPQGFFAINPKTG 1163
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T++PVYY +++EN + + +VQ+ A D D +++YKIS GNP+ +F I+ + L
Sbjct: 1108 TVEPVYYPEVMENSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGFFAINPKTGLITT 1167
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V ++V + NDN P L Y ++ E +
Sbjct: 1168 TSRKLDREQQSEHILEVTITDNGHPAKSAVTRVIVKVLDENDNKPQFLQKFYKIRLPERE 1227
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A D D + ISY I G+ F I+ +G
Sbjct: 1228 KPERERNAKRDPIYRVVAVDKDDGANAEISYSIEEGDEHGKFFIEPKTG 1276
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------- 56
+P Y A+I EN + P+V + A+ + RI Y I+ G+P + FNI+ +
Sbjct: 2153 NPFYSAEIAENANLHSPVVHVQANSPE---GYRIIYSITDGDPFNQFNINFNTGVINVFA 2209
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
LTG +V+ V I +++VNDN P+ + Y A + E
Sbjct: 2210 PLDFESHPAYKLRVRATDSLTGAHAEVF--VDIILEDVNDNPPVFREKTYAATLSEASVI 2267
Query: 99 ILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
+VQ+ A D D + IS+ + ++GN YF+ID SG
Sbjct: 2268 GTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSG 2309
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A+D D ++ Y IS GN +S F +D+ +
Sbjct: 705 IIHMEANDLDAGFSGKLLYAISGGNDDSCFAVDMETGWLKILSPLDRELKDQYNLNITVY 764
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V +VNDN P L Y + EN+ G I+Q+ A D DL +
Sbjct: 765 DLGIPQKSSWRLLDVNVLDVNDNPPEFLQESYSVHLKENEEGHNAIIQVQAVDKDLGVNG 824
Query: 117 RISYKI 122
+ Y I
Sbjct: 825 EVKYSI 830
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----FNIDIGSDL---- 58
Y I E+ I+Q+AASD D+ + I Y + E + F ++ + L
Sbjct: 2997 YAETISEDALAGRVILQVAASDADIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLDR 3056
Query: 59 -------------TGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQ 104
GG V + +++VNDN P + DP Y + EN P+++
Sbjct: 3057 EILEVYHLMVKATDGGGRFCQAAVELTLEDVNDNAPEFSADP-YTVTVYENTEPQTPLLR 3115
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D DL + ++ Y + + E F+ID SG
Sbjct: 3116 VQAIDADLGLNHKVQYSL-VSSAEGQFSIDELSG 3148
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL--T 59
+ Y A + E +VQ+ A D D + IS+ + ++GN YF+ID S L T
Sbjct: 2254 EKTYAATLSEASVIGTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSGLIET 2313
Query: 60 GGP------DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P + L+V +I + ++NDN P + VY +I E
Sbjct: 2314 AKPLDYEYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQVYEVKISELSK 2373
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D +++ Y I +GN + F I+ +G
Sbjct: 2374 PGHFVTCVKATDADSSDTEKLEYSILSGNDDMNFIINSKTG 2414
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 26/139 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGS-DLTGGPDQVYLIVY- 70
++Q+ A+ D++ + I+YKI +GN F I+ I S D P + YL V
Sbjct: 3218 VLQVYATSRDIEVNAEITYKIISGNEHGKFTINPVTGMIFIIASLDYETSP-EYYLTVEA 3276
Query: 71 ---------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
I V +VNDN P+ Y + E+ ++ + A D D +
Sbjct: 3277 TDGGTPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGEDSVSGQSVLMVVADDADGPLN 3336
Query: 116 QRISYKISAGNPESYFNID 134
I Y I+ GNP + F ID
Sbjct: 3337 NHIRYSITEGNPGNTFIID 3355
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ YF + D +G P +V + + +N +P+ +P Y A+I EN + P+V +
Sbjct: 2117 KEYFITVVAKD-SGNPSYSSEVV-VPITVMNKAMPVFENPFYSAEIAENANLHSPVVHVQ 2174
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+ + RI Y I+ G+P + FNI+ +G
Sbjct: 2175 ANSPE---GYRIIYSITDGDPFNQFNINFNTG 2203
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + ++ +++ I+ G+P F I+
Sbjct: 2904 GVIAI--LSTTDNDTEEINKEVTFHITGGDPLGQFAIENMQHEWKVYVRKPLDREVKDNY 2961
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G +V ++V + NDN P+ Y I E+ I+Q+AASD D+
Sbjct: 2962 LLNITATDGTFATKAVVEVKVLDANDNTPVCEKTSYAETISEDALAGRVILQVAASDADI 3021
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y + E F+++ +G L
Sbjct: 3022 RSNAEIIYTLHGVGAEK-FHLNPFTGEL 3048
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 25/139 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLTGG-------- 61
++ + A D D + I Y I+ GNP + F ID + +L G
Sbjct: 3323 VLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELISGYTLTIQAE 3382
Query: 62 -----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD- 115
P + V I V +VNDN PM Y I EN+ I+ LA +D D +
Sbjct: 3383 DNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVIQENKPVGFSILHLAVTDKDSSHNG 3442
Query: 116 QRISYKISAGNPESYFNID 134
++ +GN ++ F +D
Sbjct: 3443 PPFTFVFLSGNEDNTFQMD 3461
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ + I V + ND+ P Y ++ E+ + ++Q++A D D + + Y I +G
Sbjct: 1514 FARIVINVTDTNDHAPWFTSSFYEGRVYESAAVGSAVLQVSALDKDKGKNAEVGYSIESG 1573
Query: 126 NPESYFNID 134
N + F ID
Sbjct: 1574 NTANAFTID 1582
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---D 57
+ DP Y + EN P++++ A D DL + ++ Y + + E F+ID S
Sbjct: 3094 FSADP-YTVTVYENTEPQTPLLRVQAIDADLGLNHKVQYSL-VSSAEGQFSIDELSGIIS 3151
Query: 58 LTGGPDQVYLIVY-IQVQ---------------------NVNDNVPMTLDPVYYAQIVEN 95
L D+ VY + V+ ++NDN P+ Y + + E+
Sbjct: 3152 LEKPLDRELQAVYTLTVKATDQGLPRKLSSVASVVVSVLDINDNPPVFEHREYGSSLTED 3211
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A+ D++ + I+YKI +GN F I+ +G
Sbjct: 3212 APVGTEVLQVYATSRDIEVNAEITYKIISGNEHGKFTINPVTG 3254
>gi|426370122|ref|XP_004052021.1| PREDICTED: protocadherin Fat 3-like [Gorilla gorilla gorilla]
Length = 3470
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 60 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 119
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 120 TTSRKLDREQQAEHFLEVTVTDGGPAPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 179
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 180 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 224
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 53/70 (75%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V++VNDN P+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+
Sbjct: 47 VYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQ 106
Query: 129 SYFNIDIGSG 138
++F I+I +G
Sbjct: 107 NFFAINIKTG 116
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 1203 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 1262
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 1263 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 1322
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 1323 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 1362
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 465 VVVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 524
Query: 129 SYFNID 134
+ F I+
Sbjct: 525 NTFKIE 530
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 2154 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIN---PKTGGISVSE 2210
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 2211 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 2270
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 2271 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 2305
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 1822 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 1881
Query: 127 PESYFNI 133
P F +
Sbjct: 1882 PRGRFAL 1888
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 1177 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 1234
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 1235 VHYQIVQDTYNSTDYFHIDSSSG 1257
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 1841 VYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVK 1900
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 1901 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNKI 1960
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 1961 ILKVSAKDADIGSNGDIRYSLYGSGNSE--FFLDPESGEL 1998
>gi|47227101|emb|CAG00463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1078
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 25/153 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG------P 62
+ EN ++ ++A D D D + Y I GN F ID G T G
Sbjct: 781 VKENSRVGTSVLTVSAKDDDKGRDGVLRYSIKGGNGLGTFTIDEDTGVIYTAGILDCESK 840
Query: 63 DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D +L VY IQV++VNDN P+T DP+Y+ ++EN + ++++
Sbjct: 841 DAYWLTVYATDRGVTPLSASVEVFIQVEDVNDNAPLTSDPIYHPVVMENSPKDVSVIRIQ 900
Query: 107 ASDGDLDPD-QRISYKISAGNPESYFNIDIGSG 138
A D DL R+SY+I+AGNP+++F I+ +G
Sbjct: 901 AQDPDLTSTPSRLSYRITAGNPQNFFAINPRTG 933
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSDLT 59
+T DP+Y+ ++EN + ++++ A D DL R+SY+I+AGNP+++F I+ + L
Sbjct: 876 LTSDPIYHPVVMENSPKDVSVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFAINPRTGLI 935
Query: 60 G----------------------GP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP Q + V + V++ NDN P + Y + E
Sbjct: 936 TTTTRKLDREQQSEHFLEVTVIDGPVTTRQSTVWVMVHVEDENDNPPTFPEVTYRISLTE 995
Query: 95 ---NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
N+ G P+ ++ A D DL + I+Y I GN + F ID
Sbjct: 996 RDRNKRG-EPVYRVFAYDRDLGANGNITYSIVDGNEDEKFIID 1037
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+ Q+ A DGD + R+ + IS GN + FNI+ + L Q+
Sbjct: 554 VFQVRARDGDTGFNGRVLFSISDGNKLNSFNINTENGLITVFQQLDRENLDRYFLNITIY 613
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ ++ + +++ NDN P + A I+EN + L ++ + A D D+ +
Sbjct: 614 DQGVPQMSSWRLLTVIIEDANDNDPQFYQDSFSALILENSAIGLEVISITAFDRDMGQNG 673
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++SYK+ N F ID +GS+
Sbjct: 674 QLSYKML--NNIQQFGIDSETGSV 695
>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
Length = 4589
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
I+ ++A D D D I Y I G+ F ID +
Sbjct: 1054 IMTVSAHDEDTGRDGEIQYSIRDGSGVGVFKIDEETGVLETSDLLDRESMSHYWLTVYAA 1113
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P ++ +YI++++VNDN P T +PVYY +I+EN + +VQ+ A D D +
Sbjct: 1114 DRAVVPLSSFIEIYIEIEDVNDNAPQTSEPVYYPEIMENSPKDISVVQIEAFDPDSSSND 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++ YKI++GNP+ +F+I +G
Sbjct: 1174 KLMYKITSGNPQGFFSIHPKTG 1195
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEIMENSPKDISVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRRLDREQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1259
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ +L A+D D P+ ISY I GN F I+ +G
Sbjct: 1260 KPERERNAKREPLYRLIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1308
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2186 PFYSAEIPENIQMHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ + Y A + E
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQQSYSATLSEASVIG 2300
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+V++ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2301 TSVVKVRATDSDSEPNRGISYQMFGNHSKSQDHFHIDGSTG 2341
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSDLT------------------- 59
+V++ A+D D +P++ ISY++ + +S +F+ID + L
Sbjct: 2303 VVKVRATDSDSEPNRGISYQMFGNHSKSQDHFHIDGSTGLISLLRTLDYEQFQQHKIFVR 2362
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + ++ + A D D
Sbjct: 2363 AIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHATHGHFVMCVKAYDADSSD 2422
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN F I+ +G
Sbjct: 2423 IDRLEYSILSGNDHKNFVINSETG 2446
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--------------- 47
L Y+ ++ E++ I+Q+ A+D DL + ++Y I +
Sbjct: 824 LQESYFVEVNEDKEINSEIIQVEATDKDLGSNGHVTYSILTDTDKFLIDSTTGVVKIVHP 883
Query: 48 --------SYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
Y I+ G P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 884 LDREVQHVHYLKIEARDQAKGEP-QLFSTVLLKVSLEDVNDNPPKFIPPNYRVKVREDLP 942
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV L A D DL ++ Y + + E F++D SG++
Sbjct: 943 EGTIIVWLEAHDPDLGQSSQVRYSL-LDHGEGIFDVDKLSGAV 984
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
IVQ++A+D D+ + I+Y + E + N D G T P D+ VY
Sbjct: 3043 IVQVSATDADIRSNAEITYTLFGSGAEKFKVNPDTGELKTLAPLDREEQAVYNLLVRATD 3102
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P T DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRFCQANIVLPLEDVNDNAPQFTADP-YTVTVFENTEPGTLLTRVQATDADTGLNRKI 3161
Query: 119 SYKI 122
SY +
Sbjct: 3162 SYSL 3165
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFN-----IDI 54
T DP Y + EN + ++ A+D D +++ISY I + N + N I +
Sbjct: 3126 FTADP-YTVTVFENTEPGTLLTRVQATDADTGLNRKISYSLIDSANGQFSINEISGIIQL 3184
Query: 55 GSDLTGGPDQVYLIVY------------------IQVQNVNDNVPMTLDPVYYAQIVENQ 96
L VY +V + V ++NDN P+ Y A + E+
Sbjct: 3185 EKPLDRELQAVYTLVLKAVDQGLPRKLSATGTVVVSVLDINDNPPVFEYREYGATVSEDI 3244
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I GN F+ID +G++
Sbjct: 3245 LIGTEVLQVYAASRDIEANAEITYSIINGNEHGKFSIDSKTGAI 3288
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I GN F+ID TG + YL V
Sbjct: 3250 VLQVYAASRDIEANAEITYSIINGNEHGKFSID---SKTGAIFIIENLDYESAHEYYLTV 3306
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P Y A I E+ ++ + A D D
Sbjct: 3307 EATDGGTPSLSDVATANINVTDINDNTPSFSQDTYMAVISEDAVLEQSVITVLADDADGP 3366
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN S F ID G +
Sbjct: 3367 SNSLIHYSIIEGNQGSPFTIDPVKGEV 3393
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ EN+ I+ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 726 EVKENRPVGSNIIFMNSTDLDSGFNGKLIYSISGGNEDSCFIIDMDTGMLKILSPLDRET 785
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ I + + NDN P L Y+ ++ E++ I+Q+
Sbjct: 786 TDKYTLNITVYDLGIPQKAAWRLLDIIILDANDNPPEFLQESYFVEVNEDKEINSEIIQV 845
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + ++Y I
Sbjct: 846 EATDKDLGSNGHVTYSI 862
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 34/168 (20%)
Query: 3 LDPVYYAQIVENQSGILP--------IVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 54
L+P ++ VE GI+ ++ ++A D D D + Y I G+ F ID
Sbjct: 1029 LNPPVFSSFVEK--GIVKEDVPIGSSVMTVSAHDEDTGRDGEVRYSIRDGSGVGVFKIDE 1086
Query: 55 GSDLTGGPDQV------------------------YLIVYIQVQNVNDNVPMTLDPVYYA 90
+ + D++ + +YI+V++VNDN P T +PVYY
Sbjct: 1087 ETGVIETSDRLDRESTSHYWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYP 1146
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+++EN + +VQ+ A D D + +++YKI++GNP+ +F+I +G
Sbjct: 1147 EVMENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTG 1194
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D + +++YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTVARIIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPERERNAKREPIYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I G+P S F+I+ +
Sbjct: 2185 PFYSAEIPENIQMHSPVVHVQANSPE---GLKVLYSIPDGDPFSQFSINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V++ V V++VNDN P+ + Y A + E
Sbjct: 2242 LDFESHPAYKLSVRATDSLTGAHAEVFVDVI--VEDVNDNPPVFVQQSYVATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2300 TSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDGSTG 2340
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
++Q+ A+D D +P++ ISY + + +S+ F+ID + +
Sbjct: 2302 VIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDGSTGVISLVRTLDYEQFQQHRIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + + A D D
Sbjct: 2362 AVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQLYEAKISEHATHGHFVTCVKAHDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F ID +G
Sbjct: 2422 IDKLEYSILSGNDHKNFAIDSETG 2445
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ EN+ I+ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 EVKENRPLGSNIIFMNATDPDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ I+V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITAFDLGMPQKAAWHLLDIRVLDANDNPPEFLQESYFVEVSEDKEVNSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + ++Y I
Sbjct: 845 EATDKDLGSNGHVTYSI 861
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--------------------- 41
L Y+ ++ E++ I+Q+ A+D DL + ++Y I
Sbjct: 823 LQESYFVEVSEDKEVNSEIIQVEATDKDLGSNGHVTYSILTDTDKFAIDSMTGVVRVVYP 882
Query: 42 --SAGNPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ T P Q++ IV ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDREAQPVHYLKIEARDQATEEP-QLFSIVLLKVSLEDVNDNPPRFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTIIMWLEAYDPDLGQSSQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y +S E + N D G T P D+ +Y
Sbjct: 3042 IMQVSATDADIRSNAEITYTLSGPGAEKFKLNPDTGELKTLAPLDREEQAIYNLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P + DP Y + EN P+ ++ A+D D +++I
Sbjct: 3102 GGGRFCQANIMLTLEDVNDNAPEFSADP-YTITVFENTEPGTPLTRVQATDADAGLNRKI 3160
Query: 119 SYKI 122
SY +
Sbjct: 3161 SYSL 3164
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
I+Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3249 ILQVYAASRDIEANAEITYSIISGNEHGKFSID---SKTGAIFIIENLDYESSHEYYLTV 3305
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y A + E+ ++ + A D D
Sbjct: 3306 EATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTYTAVVSEDAVLEQSVITVMADDADGP 3365
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN S F ID G +
Sbjct: 3366 SNSHIHYSIIDGNQGSPFTIDPARGEV 3392
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-----------------ISA 43
+ DP Y + EN P+ ++ A+D D +++ISY I
Sbjct: 3125 FSADP-YTITVFENTEPGTPLTRVQATDADAGLNRKISYSLINSADGQFSINELSGIIQL 3183
Query: 44 GNP-----ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P +S + + + + G P ++ V + V ++NDN P+ Y + E+
Sbjct: 3184 EKPLDRELQSVYTLTLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGTTVSEDI 3243
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 LTGTEILQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAI 3287
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVENQ G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVLESNPYEAFIVENQPGGSRVIQIRASDLDSGTNGQVMYSL 2848
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + +++++Y I+ G+P F I+
Sbjct: 2935 GVIAI--LSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEWKVYVKKPLDREKRDNY 2992
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G IV ++V + NDN P+ +Y I E+ I+Q++A+D D+
Sbjct: 2993 LLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDSFPGKLIMQVSATDADI 3052
Query: 113 DPDQRISYKISAGNPESY-FNIDIG 136
+ I+Y +S E + N D G
Sbjct: 3053 RSNAEITYTLSGPGAEKFKLNPDTG 3077
>gi|431916496|gb|ELK16474.1| Protocadherin Fat 3 [Pteropus alecto]
Length = 1266
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 53/71 (74%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI++++VNDN P+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+
Sbjct: 1192 VYIEIEDVNDNAPLTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQ 1251
Query: 129 SYFNIDIGSGS 139
++F I+I +G
Sbjct: 1252 NFFAINIKTGK 1262
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 40/56 (71%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I +
Sbjct: 1205 LTSEPIYYPAVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKT 1260
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 780 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 839
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ I+Q+ A D DL +
Sbjct: 840 DLGNPQKSSWRLLTINVEDANDNSPIFLQDSYTVNILESLGIGTEIIQVEARDKDLGSNG 899
Query: 117 RISYKI 122
++Y +
Sbjct: 900 EVTYSV 905
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1053 VMTVSAHDEDTGRDGEIRYSIRDGSGIGVFKIDEETGVIETCDRLDRESTSHYWLTVYAA 1112
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ VYI+V++VNDN P T +PVYY +++EN + +VQ+ A D D +
Sbjct: 1113 DQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSND 1172
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++ YKI++GNP+ +F+I +G
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +++EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+IVEN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2187 YSAEIVENVQMHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAPLD 2243
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2244 FESHPAYKLSVRATDSLTGAHAEVF--VDIVVEDINDNPPVFAHQSYAATLSEASVIGTS 2301
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+V + A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2302 VVHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2340
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +V + A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2288 YAATLSEASVIGTSVVHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2347
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+ +
Sbjct: 2348 LDFEQSQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDRQIYEAKISEHAAPGQ 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2408 FVTCMKAYDADSSDIDKLEYSILSGNDHKTFVIDSETG 2445
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 823 LQESYFVEVSEDKEVNSEIIQVEATDKDLGPNGHVTYSILTDTDKFSIDSVTGVVKIIHT 882
Query: 46 ------PESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ P Q++ V ++V ++VNDN P+ + P Y ++ E+
Sbjct: 883 LDREVQPVHYLKIEARDQAREEP-QLFSTVLLKVSLEDVNDNPPVFIPPSYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTIIMWLEAHDPDLGQSSQVRYSL-MDHGEGGFDVDKLSGAV 983
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ EN ++ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 EVKENHPMGSSVIFMNATDLDTGFNGKLVYAISGGNEDSSFIIDMETGMLKVFSPLDRET 784
Query: 60 -------------GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 KDRYSLNITVYDLGIPQKATWHLLDLIVLDANDNPPEFLQESYFVEVSEDKEVNSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSVTG 875
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGS-DLTGGPDQVYLIVY-------- 70
++Q++A+D D+ + I+Y + E + N D G + D+ + VY
Sbjct: 3042 VMQISATDADIRSNAEITYTLFGSGAEKFKLNPDTGELKILTALDREHQAVYNLLVKATD 3101
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P T DP Y + EN P+ ++ A+D D +Q+I
Sbjct: 3102 GGGRFCEANIVLTLEDVNDNPPEFTADP-YTIAVFENTEPGTPLTRVQATDADAGLNQKI 3160
Query: 119 SY 120
SY
Sbjct: 3161 SY 3162
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-----------------ISA 43
T DP Y + EN P+ ++ A+D D +Q+ISY I
Sbjct: 3125 FTADP-YTIAVFENTEPGTPLTRVQATDADAGLNQKISYLLMNSADGQFSINELSGIIQL 3183
Query: 44 GNP-----ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P ++ + + + + G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3184 EKPLDRELQAVYTLTVKAVDQGLPRRLTATSSVIVSVLDINDNPPVFEYREYGATVSEDI 3243
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 LIGTEVLQVYAASRDIEANAEITYLIISGNEHGKFSIDSKTGAI 3287
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV++ NDN P+ Y A +VEN G ++Q+ ASD D + +++Y + E
Sbjct: 2795 VSIQVKDANDNSPVLESNPYEAFVVENLPGGSRVIQIRASDLDSGTNGQVTYSLDLSQSE 2854
Query: 129 SY---FNIDIGSG 138
F I+ +G
Sbjct: 2855 EVIESFTINKETG 2867
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYLIISGNEHGKFSID---SKTGAIFIIENLDYESSHEYYLTV 3305
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y I E+ ++ + A D D
Sbjct: 3306 EATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDAILEQSVITVMADDADGP 3365
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN + F ID G +
Sbjct: 3366 SNSHIRYSIIDGNQGNPFTIDSVKGEV 3392
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + D +
Sbjct: 1048 VMTVSAYDEDAGRDGEIRYSIRDGSGIGVFRIDEEKGIIETADHLDRETTSHYWLTVYAT 1107
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V +VNDN P T +PVYY +++EN + ++Q+ A D D +
Sbjct: 1108 DQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSE 1167
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++SYKI++GNP+ +F+I+ +G
Sbjct: 1168 KLSYKITSGNPQGFFSINPKTG 1189
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +++EN + ++Q+ A D D +++SYKI++GNP+ +F+I+ + L
Sbjct: 1134 TTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSEKLSYKITSGNPQGFFSINPKTGLITT 1193
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQI---- 92
G P + + V ++V + NDN P L Y ++
Sbjct: 1194 TSRKLDREQQGEHILEVTVTDNGTPAKSTIARVIVKVLDENDNKPQFLQKFYKIRLPERG 1253
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1254 KPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1302
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++I EN P+V + A+ + ++ Y I+ G+P + F I+ +
Sbjct: 2180 PFYSSEIPENIQLHSPVVHVQANSPE-GQGLKVFYSITGGDPFNQFTINFNTGVXNVVAP 2238
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L G V+ V I V+++NDN P+ + Y A + E
Sbjct: 2239 LDFESHPAYKLSVRATDSLNGAHADVF--VDIIVEDINDNPPVFTEQSYIATLSEASVIG 2296
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+ Q++A+D D ++ ISY + N ES YF+ID +G
Sbjct: 2297 TSVAQVSATDADSGTNRGISYHLVEDNSESHDYFHIDSSTG 2337
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
+I E+Q I+ + A+D D + ++ Y ISAGN +S F +D+
Sbjct: 720 EIKEDQPVGSSIISVNAADLDTGFNGKLVYVISAGNEDSSFIVDMEGGVLKILSPLDREL 779
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ I++ + NDN P L Y+ ++ EN+ I+Q+
Sbjct: 780 RDKYTLNITVYDLGIPQKSAWTLLDIKILDANDNPPEFLQDSYFVEVSENKEPNSEIIQI 839
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + + Y +
Sbjct: 840 GATDKDLGANGEVKYSL 856
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3237 VLQIHAASRDIEANAEITYSIVSGNEHGKFSID---STTGAIFIIESLDYESSHEYYLTV 3293
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y A I E+ ++ + A D D
Sbjct: 3294 EATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTYTAVISEDAMLEQSVITVMADDADGP 3353
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ R+ Y I GN + F ID G +
Sbjct: 3354 SNNRVHYTIIDGNQGNPFTIDPTRGEI 3380
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3206 VSVLDINDNPPVFEQREYSASVSEDILVGTEVLQIHAASRDIEANAEITYSIVSGNEHGK 3265
Query: 131 FNIDIGSGSL 140
F+ID +G++
Sbjct: 3266 FSIDSTTGAI 3275
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y V + V + ND+ P P Y ++ E+ + ++Q+ A D D + I Y I +G
Sbjct: 1540 YARVVVNVSDTNDHAPWFTSPAYEGRVYESAAVGSAVLQVTALDKDKGKNAEIVYSIESG 1599
Query: 126 NPESYFNID 134
N + F ID
Sbjct: 1600 NIGNSFLID 1608
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+++V + V++VNDNVP ++ YYA + V++++G + I ++ A D D + + Y +
Sbjct: 2059 HIVVKVTVEDVNDNVPFFVNLPYYAAVKVDSEAGHI-IQRVTAVDKDTGKNGEVRYYLKE 2117
Query: 125 GNPESYFNID 134
N +F ID
Sbjct: 2118 HN--EHFQID 2125
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSDLTGG- 61
D V A + ENQ + + A D D L D RI Y I G+ F+ID ++
Sbjct: 1113 DFVVSASVFENQPVGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNEGNIKTKA 1172
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P L VY++V + NDN P+T PVYY ++EN
Sbjct: 1173 VLDVESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDKNDNTPLTEVPVYYPSVLENSPAG 1232
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++Q+ A D D+ P QR ++ I++GNPE YF I+ +G
Sbjct: 1233 VSVLQIRAFDRDVSP-QRFTFSITSGNPEGYFLINSTTG 1270
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++EN + ++Q+ A D D+ P QR ++ I++GNPE YF I+ + L
Sbjct: 1215 LTEVPVYYPSVLENSPAGVSVLQIRAFDRDVSP-QRFTFSITSGNPEGYFLINSTTGLIT 1273
Query: 59 TGG--------PDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G + V + V I V ++ND+ P Y QI +
Sbjct: 1274 TSGRKLDRENQAEHVLEVTVRDDGWPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPAS 1333
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
S P+ Q+ A D D+ + +I Y I
Sbjct: 1334 PSTDKPLFQVLAKDKDIGDNGKIQYSI 1360
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-- 61
+ VY+ I EN I+QL A+D D D+++ Y + A ++ I +TG
Sbjct: 1528 ESVYHVDISENVEKGEKILQLHATDED--EDKKVFYSLHAAQNQASLEIFHVDSVTGAVT 1585
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ Y V + V + ND+ P + + ++ E
Sbjct: 1586 LNEVLDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYETS 1645
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F ID
Sbjct: 1646 PIGAAVVQVYAIDRDKGDNAKITYSITSGNVGNMFTID 1683
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y++++ E + + ++ A+ D + + Y I GN F ID + +
Sbjct: 3297 IYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARTGVIIIAEQL 3356
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P + V I V + NDN P+ + Y A I E+
Sbjct: 3357 DFERARDYFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 3416
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 3417 VIQVFANDLDSEENGNVSYYIERGDRQKQFSIDQKTGQI 3455
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ DGD +D D+R + I N ++++N+ I +T
Sbjct: 1445 LVALVQATDKDGDYLWYDIIDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTI--RVT 1502
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
D + + V ++ND+ P + VY+ I EN I+QL A+D D D+++
Sbjct: 1503 DSVDSAVTQLLVNVIDINDHRPEFTESVYHVDISENVEKGEKILQLHATDE--DEDKKVF 1560
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D +G++
Sbjct: 1561 YSLHAAQNQASLEIFHVDSVTGAV 1584
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 2948 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEATVNEDALPGTVVVK 3005
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+P S F I
Sbjct: 3006 LITVDKDSDVNTPIEFYITSGDPRSQFQI 3034
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D++++Y I GN +
Sbjct: 2450 VWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDEKLTYTIVGGNEQ 2508
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 2509 QTYNIDQSTG 2518
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+P S F I ++
Sbjct: 2985 VDDRYEATVNEDALPGTVVVKLITVDKDSDVNTPIEFYITSGDPRSQFQIRSTGEVYVAK 3044
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +Q+ +VNDN P L Y + E +
Sbjct: 3045 SLDRETIDRYELEIVGTDGKYVFKTRVTVQILDVNDNPPYCLRYRYREILSEGSHPGTYV 3104
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 3105 LTVLATDYDDEPNAKLRFYLTGDNNDK-FSLDKETGVL 3141
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y+ ++ G P ++ +N+ I +
Sbjct: 3208 VTKVHATDDDIGINRKIRYEFIDSADGHFLIATDSGIVTLGKPLDRETKAMYNVTIQALD 3267
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + + + VQ++NDN P +Y++++ E + + ++ A+ D +
Sbjct: 3268 QGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLATSKDTGVNAD 3327
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I GN F ID +G
Sbjct: 3328 VYYSIVGGNEHKKFQIDARTG 3348
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y V + + ++NDN P+ +Y ++ E P++QL +D D + + +I G
Sbjct: 402 YKFVPVHLADLNDNAPVFSREIYEVKVPETAPINTPVIQLKVTDADEGRNALVFLEIVGG 461
Query: 126 NPESYFNIDIGSGSL 140
N F+++ +G L
Sbjct: 462 NEGGEFHVNAETGML 476
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISY 120
P ++IV + + ++NDN PM ++ YYA + VE Q G + I ++ A D D + + Y
Sbjct: 2133 PRVAHVIVNVTILDINDNCPMFVNLPYYAVVSVEAQKGDI-ITKVHAIDMDSGDNGEVRY 2191
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ G+ E F + +G +
Sbjct: 2192 ELKKGHGE-LFKVCRKTGEI 2210
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL------ 100
++N+ I + + + V + V + NDN P L Y +I E + G L
Sbjct: 1801 KFYNLTIAATNMASA-KAHCNVIVHVLDRNDNAPRFLQAAYSGEISEGATIGSLVLTNTS 1859
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P YF+ID +G++
Sbjct: 1860 TPLV-IKAEDADSELNALLNYDIVEDLPRKYFHIDSSTGAI 1899
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQV------------- 65
++ ++A D D D I Y I G+ F ID G + D++
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGKCVIETSDRLDRESTSHYWLTVY 1113
Query: 66 -----------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
++ VYI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D
Sbjct: 1114 ATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSS 1173
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +++Y+I++GNP+ +F+I +G
Sbjct: 1174 NDKLTYRITSGNPQGFFSIHPKTG 1197
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 33/170 (19%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + +++Y+I++GNP+ +F+I + L
Sbjct: 1142 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLTYRITSGNPQGFFSIHPKTGLITT 1201
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1202 TSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPERE 1261
Query: 97 --------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S P+ ++ A+D D P+ +SY I GN F+I+ +G
Sbjct: 1262 KADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTG 1311
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2191 YSAEIPENIQMHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVVNVIAPLD 2247
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V+++NDN P+ + P Y + E P
Sbjct: 2248 FESHPAYKLSVRATDSLTGAHAEVF--VDIIVEDINDNPPVFVQPSYSTTLSEASVIGTP 2305
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
++Q+ A+D D +P++ ISY++ + +S +F+ID +G
Sbjct: 2306 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTG 2344
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+ P Y + E P++Q+ A+D D +P++ ISY++ + +S+ + I S+ TG
Sbjct: 2288 VQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSN-TGLI 2346
Query: 63 DQVYLIVYIQVQN---------------------------VNDNVPMTLDPVYYAQIVEN 95
V + Y Q Q +NDN P+ VY A+I E+
Sbjct: 2347 SLVRALDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEH 2406
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ + A D D ++ Y I +GN F ID +G
Sbjct: 2407 AAHGHFVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETG 2449
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A+D D + ++ Y IS GN +S F ID+ +
Sbjct: 737 ILFMNATDLDSGFNGKLVYAISGGNDDSCFTIDMETGVLKVLSPLDREVMDKYTLNITVY 796
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V + NDN P L Y+ ++ E++ I+Q+ A+D DL P
Sbjct: 797 DLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSEIIQVEATDKDLGPSG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++Y I + F+ID +G
Sbjct: 857 HVTYAILTDTEK--FSIDSMTG 876
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID I S + YL V
Sbjct: 3253 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEAT 3312
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y + E+ + P++ + A D D +
Sbjct: 3313 DGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPVITIMADDADGPSNS 3372
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3373 HIHYSIIEGNQGSPFTID 3390
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
++Q++A+D D+ + I+Y + E + N D G T
Sbjct: 3046 VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATD 3105
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + +++VNDN P T +P Y + EN P+ ++ A+D D +++I
Sbjct: 3106 GGGRSCQAAIVLTLEDVNDNAPEFTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKI 3164
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY + + + F+I+ SG
Sbjct: 3165 SYSL-VESADGQFSINERSG 3183
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P ++Y I
Sbjct: 824 LQESYFVEVSEDKEVNSEIIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQP 883
Query: 46 ------PESYFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ T P +++ V ++V +VNDN P + P Y ++ E+
Sbjct: 884 LDREVQPVHYLKIEARDQATEEP-RLFSTVLLKVSLDDVNDNPPRFIPPNYSVKVREDLP 942
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D+ ++ Y + + E +F++D SG++
Sbjct: 943 EGTIIMWLEAYDPDVGQSSQVRYSL-LDHGEGHFDVDKLSGAV 984
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
T +P Y + EN P+ ++ A+D D +++ISY + + + F+I+ S +
Sbjct: 3129 FTAEP-YTITVFENTEPGTPLTRVQATDADTGLNRKISYSL-VESADGQFSINERSGIIQ 3186
Query: 59 ---------------------TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3187 LEKHLDRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSED 3246
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3247 IVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAI 3291
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y + E+ + P++ + A D D + I Y I GN S F ID
Sbjct: 3343 TYTTVVSEDAALEQPVITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPL 3402
Query: 54 -----IGSDLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G LT G P +V V I V +VNDN P+ Y I EN+
Sbjct: 3403 DRETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFS 3462
Query: 102 IVQLAASDGDLDPD-QRISYKISAGNPESYFNID 134
+++L +D D + + I +GN E+ F ++
Sbjct: 3463 VLKLVVTDKDSSHNGPPFFFTIVSGNDENAFEVN 3496
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2799 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSL 2852
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + D +
Sbjct: 1054 VMTVSAYDEDEGRDGEIRYSIRDGSGMGVFRIDEEKGIIETADHLDRETTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V +VNDN P T +PVYY +++EN + ++Q+ A D D +
Sbjct: 1114 DQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSE 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1174 KLTYKITSGNPQGFFSINSKTG 1195
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +++EN + ++Q+ A D D ++++YKI++GNP+ +F+I+ + L
Sbjct: 1140 TTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGFFSINSKTGLITT 1199
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQI---- 92
G P + + V ++V + NDN P L Y ++
Sbjct: 1200 TSRKLDREQQAEHILEVTVTDNGIPAKSTVARVIVKVLDENDNKPQFLQKFYKIRLPERG 1259
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1260 KPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1308
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAA----------SDGDLDPDQRISYKISAG---------- 44
P Y A+I EN P+V + A S D DP + + G
Sbjct: 2186 PFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITDGDPFNQFMINFNTGVINVVAPLDF 2245
Query: 45 --NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+P NI LTG V+ V I V+++NDN PM + Y + E +
Sbjct: 2246 ESHPAYKLNIRATDSLTGAHADVF--VDIIVEDINDNPPMFTEQSYTVTLSEASVIGTSV 2303
Query: 103 VQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+Q++A+D D ++ ISY + + ES YF+ID +G
Sbjct: 2304 LQVSATDADSGTNRGISYHLIEDDTESHEYFHIDSSTG 2341
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--------- 57
Y A + E+ ++Q+ A+ D++ + I+Y I +GN F+ID +
Sbjct: 3236 YSASVSEDTVVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSATGAIFIIDSLD 3295
Query: 58 --------LT-----GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
LT GG + + V I V ++NDN P+ Y A I E+ +
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAMLEQSV 3355
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I Y I+ GN + F ID G +
Sbjct: 3356 ITVMADDADGPSNNHIHYTITDGNQGNPFTIDPSRGEI 3393
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---D 57
T+DP Y + EN + ++ A+D D +++I Y + + E F+ID S
Sbjct: 3126 FTVDP-YSITVFENTEPKTLLTRVQATDADAGMNRKIHYSL-VNSAEGQFSIDEFSGIIR 3183
Query: 58 LTGGPDQVYLIVY----------------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
L D+ VY + V ++NDN P+ Y A + E+
Sbjct: 3184 LEKSLDRELQAVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEYREYSASVSED 3243
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 TVVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSATGAI 3288
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
++ E+Q I+ L A+D D + ++ Y IS GN +S F +D+ S
Sbjct: 726 EVREDQPVGSSIILLNATDLDTGFNGKLVYVISGGNEDSSFIVDMESGMLKILSPLDREV 785
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ I++ + NDN P L Y+ ++ EN+ I+Q+
Sbjct: 786 KDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSYFVEVSENKELNSEIIQI 845
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + + Y +
Sbjct: 846 EATDKDLGANGEVKYSL 862
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSDLT------------------- 59
++Q++A+D D ++ ISY + + ES YF+ID + L
Sbjct: 2303 VLQVSATDADSGTNRGISYHLIEDDTESHEYFHIDSSTGLILTTRTLDYEKIQQHKLLIR 2362
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P ++ + V ++NDN P+ VY A+I E + + ASD D
Sbjct: 2363 AIDGGMLPLSSDTVITVDVTDLNDNPPLFNQLVYEAKISELAPRGHFVTCVQASDADRSD 2422
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I GN + F I+ +G
Sbjct: 2423 ADKLEYSIMTGNDQKNFVINSKTG 2446
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + D G T P D+ VY
Sbjct: 3043 IMQVSATDADIRSNAEITYTLHGPGAEKFRLTPDTGELKTLMPLDREQQAVYYLLMKATD 3102
Query: 71 -----------IQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P+ T+DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRFCQANIILTLEDVNDNAPVFTVDP-YSITVFENTEPKTLLTRVQATDADAGMNRKI 3161
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + E F+ID SG
Sbjct: 3162 HYSL-VNSAEGQFSIDEFSG 3180
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------------------SA 43
Y+ ++ EN+ I+Q+ A+D DL + + Y +
Sbjct: 828 YFVEVSENKELNSEIIQIEATDKDLGANGEVKYSLLTDTDKFAINAVTGVVKVVGLLDHE 887
Query: 44 GNPESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
P + I+ T P Q++ +I+ + +++VNDN P + Y+ +I E+
Sbjct: 888 EQPVYFLKIEARDQPTEEP-QLFSTVILKVSIEDVNDNPPKFIPSNYHVKIREDLPEGTI 946
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I L A D DL ++ Y + + + F++D SG++
Sbjct: 947 ITWLEAYDPDLGQSSQVRYSL-LDSGDGTFDVDKLSGAI 984
>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
Length = 4557
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++Q+ A D D D I Y I G+ F+ID
Sbjct: 1053 VKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDRETT 1112
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+D P + VYI+V++VNDN P+T +P+YY I+EN + ++Q+
Sbjct: 1113 KSYWLTVYATDHGVVPLYTTMEVYIEVEDVNDNAPLTSEPIYYPVIMENSPKDVSVIQIQ 1172
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1173 AQDPDSSTNEKLTYRITSGNPQNFFVINPKTG 1204
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
+T +P+YY I+EN + ++Q+ A D D +++++Y+I++GNP+++F I+
Sbjct: 1148 LTSEPIYYPVIMENSPKDVSVIQIQAQDPDSSTNEKLTYRITSGNPQNFFVINPKTGLIT 1207
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
SD P Q + V +QV + NDN P + VY ++ E
Sbjct: 1208 TTSRKLDREQQAEHFLEVTVSDGGASPKQSSVWVVVQVLDENDNKPQFPEKVYQIKLPER 1267
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1268 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1312
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + R+ Y IS GN +S FNID+
Sbjct: 746 ILRIKAYDADSGFNGRVLYTISDGNVDSCFNIDMEMGILSVLMPLDREKTELYLLNITIY 805
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 806 DLGNPQKSSWRLLTVTVEDANDNKPVFLQDSYSVNILESTSLGTEIIQVEARDKDLGSNG 865
Query: 117 RISYKI 122
++Y +
Sbjct: 866 EVTYSV 871
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A + E+ +PI+ + A+ + Q I Y I G+P + FNID +
Sbjct: 2190 PFYTASVNEDVEMHVPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLSVISP 2246
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V V + V +VNDN P+ Y A + E
Sbjct: 2247 LDYEINSLFKLMVRASDSLTGARAEV--TVDLIVNDVNDNPPVFDQSAYNATLSEASLIG 2304
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ A+D D D ++ + Y+I N YF+ID SG
Sbjct: 2305 TPVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSSSG 2345
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ + D
Sbjct: 3242 YLVTVPEDTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGVISIIEALD 3301
Query: 58 LTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D YL+V + V +VNDN P VY A I E+ +
Sbjct: 3302 FESCKD-FYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPTFSQAVYSAVISEDAAVGDS 3360
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+V L A D D P+ +I + I G+ ++ F++D
Sbjct: 3361 VVMLIAEDLDSPPNGQIHFSIVNGDQDNEFSVD 3393
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D D+ +++++Y +S + + YF++D S +
Sbjct: 3137 YTACVYENTATKALLTRVQATDPDVGVNRKVTYSLS-DSADGYFSVDRSSGIIILEHPLD 3195
Query: 59 ----------TGGPDQV-------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 3196 RELQSSYNITVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 3255
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+ D+ + I+Y I +GN + F I+ +G
Sbjct: 3256 VLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTG 3292
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG---------------- 61
P++Q+ A+D D D ++ + Y+I N YF+ID S L
Sbjct: 2306 PVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSSSGLILTARMLDHELIQQCSLKV 2365
Query: 62 --------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P ++V I + ++NDN P+ +Y + + E + + ASD D
Sbjct: 2366 RATDNGFPPMSSEVLVSISITDMNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSS 2425
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN + F +D SG
Sbjct: 2426 DFDRLEYSILSGNDRTSFIMDSKSG 2450
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1553 VIINVEDSNDHSPYFTSPLYEASVFESAAVGSAVLQVTALDKDKGENAELIYTIEAGNTG 1612
Query: 129 SYFNID 134
+ F I+
Sbjct: 1613 NTFKIE 1618
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ +++VNDN P+ Y A + EN + + ++ A+D D+ +++++Y +S + +
Sbjct: 3118 IHLILEDVNDNPPVFSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSLS-DSAD 3176
Query: 129 SYFNIDIGSG 138
YF++D SG
Sbjct: 3177 GYFSVDRSSG 3186
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L + A +++ SG + ++ D D + D ++ + A D+G L+
Sbjct: 2860 LQKITEAFTIDSNSGWISTLK----DLDHEKDSAFTFAVVAS--------DLGEALSLSS 2907
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYK 121
+V + V ++NDN P+ VY + E+ + L+ D D D ++++SY
Sbjct: 2908 TT---LVSVTVTDINDNAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYH 2964
Query: 122 ISAGNPESYFNI 133
I+ GNP+ F++
Sbjct: 2965 ITGGNPKGKFSL 2976
>gi|344243495|gb|EGV99598.1| Protocadherin Fat 3 [Cricetulus griseus]
Length = 143
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 53/71 (74%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V++VNDN P+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+
Sbjct: 69 VYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQ 128
Query: 129 SYFNIDIGSGS 139
++F I+I +G
Sbjct: 129 NFFAINIKTGK 139
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 40/56 (71%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I +
Sbjct: 82 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKT 137
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++Q+ A D D D I Y I G+ F+ID
Sbjct: 1053 VKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADILDRETT 1112
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+D P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1113 KSYWLTVYATDHGVVPLYTTIEVYIEVEDVNDNAPLTSEPIYYPTVMENSPKDVSVIQIQ 1172
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1173 AQDPDSSTNEKLTYRITSGNPQNFFVINPKTG 1204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1148 LTSEPIYYPTVMENSPKDVSVIQIQAQDPDSSTNEKLTYRITSGNPQNFFVINPKTGLIT 1207
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1208 TTSRKLDREQQAEHFLEVTVSDGGTSPKQSSVWVVVQVLDENDNKPQFPEKVYQIKLPER 1267
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1268 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1312
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + R+ Y IS GN +S FNID+ +
Sbjct: 746 ILRIKAYDADSGFNGRVLYTISDGNVDSCFNIDMETGVLNVLMPLDREKTDLYLLNITIY 805
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL P + ++ + V++ NDN P+ L Y I+E+ S + I+Q+ A D DL +
Sbjct: 806 DLGNPPKSAWRLLTVTVEDANDNKPVFLQDSYSVNILESTSLLTEIIQVEARDKDLGSNG 865
Query: 117 RISYKI 122
++Y +
Sbjct: 866 EVTYSV 871
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2190 PFYTASVNEDVEMHTPILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVLSVISP 2246
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V +VNDN P+ Y A + E
Sbjct: 2247 LDYEINSLFKLMVRASDALTGARAEV--TVDLIVNDVNDNPPLFDQSSYNATLSEASLIG 2304
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ A D D D ++ + Y+I N YF+ID SG
Sbjct: 2305 TPVLQVVALDADSDNNKLVQYQIVQDTFNSTDYFHIDSSSG 2345
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D D+ +++++Y + A + + YF++D S +
Sbjct: 3137 YTACVYENTATKALLTRVQATDPDVGVNRKVTYTL-ADSADGYFSVDRSSGIIILEHPLD 3195
Query: 59 ----------TGGPDQV-------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 3196 RELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 3255
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN + F I+ +G++
Sbjct: 3256 VLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGAI 3294
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ + D
Sbjct: 3242 YLVTVPEDTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGAISIFEALD 3301
Query: 58 LTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D YL+V + V +VNDN P VY A I E+ +
Sbjct: 3302 YESCKD-FYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQAVYSAVISEDAAVGDS 3360
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L A D D P+ +I + I G+ ++ F++D G G
Sbjct: 3361 VIMLIAEDLDSPPNGQIHFSIVNGDQDNEFSVDPGLG 3397
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTGGP-DQVYLIVY-------- 70
I++++A D D+ + I Y + AGN + + + + G + P D+ + VY
Sbjct: 3049 ILKISAKDADIGSNGEIRYSLFGAGNNKFFLDPENGELKSLAPLDREKIPVYNLVARATD 3108
Query: 71 -----------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ +++VNDN P+ Y A + EN + + ++ A+D D+ +++++
Sbjct: 3109 GGGRFCQSEIHLILEDVNDNPPVFSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVT 3168
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + A + + YF++D SG
Sbjct: 3169 YTL-ADSADGYFSVDRSSG 3186
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1553 VIINVEDSNDHSPYFTSPLYEASVFESAAVGSAVLQVTALDKDKGENSELIYTIEAGNTG 1612
Query: 129 SYFNID 134
+ F I+
Sbjct: 1613 NSFKIE 1618
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 29/159 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------- 55
P Y A V+ + G L I ++ A D D D + +SY + +F ID G
Sbjct: 2089 PYYAAVQVDAEPGTL-IYRVTAIDKDKDENGEVSYLLKED--YGHFEIDRGTGSVTLKEA 2145
Query: 56 --SDLT------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SDL+ GG + +V + + VN +P+ P Y A + E+ P
Sbjct: 2146 FNSDLSNIEYLVVILAKDGGNPSLSALVELPITIVNKAMPVFDKPFYTASVNEDVEMHTP 2205
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A+ + Q I Y I G+P + FNID +G L
Sbjct: 2206 ILSINATSPE---GQGIIYIIVDGDPYNQFNIDFDTGVL 2241
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY A I E+ + ++ L A D D P+ +I + I G+ ++ F++D G L ++
Sbjct: 3346 VYSAVISEDAAVGDSVIMLIAEDLDSPPNGQIHFSIVNGDQDNEFSVDPGLGLVKVKKKL 3405
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V + + +VNDN P+ Y A I EN+
Sbjct: 3406 DRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNGPIFTPANYTAVIQENKPVGTS 3465
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D ++ I GN E F +D
Sbjct: 3466 ILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLD 3499
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A++ EN + ++ + A+DGD +ISY I + F ID
Sbjct: 2501 VYVAEVRENATPGTKVIHVKATDGDSGVYGQISYSIINDFAKDRFLIDSNGQILTTERLD 2560
Query: 54 ----IGSD-------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD L GG + V + V + NDN P + Y A + + +
Sbjct: 2561 RENPLESDIGIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMAVEYRASVKADVGKGYLV 2620
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2621 TQVQAVDPDAGANSRITYSL 2640
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L+ + A +++ SG + ++ D D + D ++ + A D+G L+
Sbjct: 2860 LEKITEAFTIDSNSGWISTLK----DLDHEKDPAFTFAVVAS--------DLGEALSLSS 2907
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYK 121
+V + V ++NDN P+ VY + E+ + L+ D D D ++++SY
Sbjct: 2908 TT---LVSVTVTDINDNAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYH 2964
Query: 122 ISAGNPESYFNI 133
I+ GNP+ F +
Sbjct: 2965 ITGGNPKGKFAL 2976
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 25/153 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG------P 62
+ EN ++ + A D D D + Y I G+ F ID G T G
Sbjct: 1028 VKENSRAGTSVLTVNAKDDDKGRDGVLKYSIQGGSGLGTFTIDEDTGVIYTSGILDCETK 1087
Query: 63 DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D +L V +IQV++VNDN P+T DP+Y+ I+EN + ++++
Sbjct: 1088 DSYWLTVCAVDRGVPPLSASVEVFIQVEDVNDNAPLTSDPIYHPTIMENSPKDVSVIRIQ 1147
Query: 107 ASDGDLDP-DQRISYKISAGNPESYFNIDIGSG 138
A D DL R+SY+I+AGNP+++F+I+ +G
Sbjct: 1148 AQDPDLTAIPSRLSYRITAGNPQNFFSINPKTG 1180
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 30/163 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSDLT 59
+T DP+Y+ I+EN + ++++ A D DL R+SY+I+AGNP+++F+I+ + L
Sbjct: 1123 LTSDPIYHPTIMENSPKDVSVIRIQAQDPDLTAIPSRLSYRITAGNPQNFFSINPKTGLI 1182
Query: 60 G----------------------GP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP Q + V + VQ+ NDN P + Y + E
Sbjct: 1183 TTTARKLDREQQAEHFLEITVIDGPVTTRQSTVWVIVHVQDENDNPPTFPEVTYRISLPE 1242
Query: 95 ---NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
N+ G P+ ++ A D D + I+Y I +GN + F+ID
Sbjct: 1243 RDRNKRG-EPVYRVFAYDRDYGANGNITYSIISGNEDEKFSID 1284
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL--------------- 58
+V++ A+ D+ P+ I+Y I +GN F ID + DL
Sbjct: 3256 VVRVLATSADIGPNAEITYNIRSGNELGKFTIDRKWGSISVADDLDFEVCKDYYLTIEAW 3315
Query: 59 -TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P +V I++ +VNDN P +Y + E+ S + ++ A D D +
Sbjct: 3316 DNGNPPLSTATMVTIELMDVNDNAPAFSQDIYNLLVSEDASVGQTVTRVVAEDLDSQVNG 3375
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI+Y I G+ ++F ID +G L
Sbjct: 3376 RITYSILKGDRNNHFWIDPVAGLL 3399
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ Q+ A DGD + R+ + IS GN E+ FNI++ S L
Sbjct: 722 VFQVRARDGDTGFNGRVLFSISDGNKENCFNINMESGLITILRPLDRERVDRYFLNITIY 781
Query: 59 -TGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + ++ + +++ NDN P Y A + EN + + ++ + A D D+ +
Sbjct: 782 DQGIPQMSGWRLLTVIIEDTNDNDPQFYQDSYSALVSENSAIGMEVITITAFDRDMGQNG 841
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++SY + P+ F ID +GS+
Sbjct: 842 QLSYIMLTSVPQ--FGIDSETGSV 863
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG--GPDQVYLIVYIQVQNVN 77
P+ + + LD + R SY++ +D G G + + I V +VN
Sbjct: 3182 PVTGVVVLEKSLDRESRDSYRVRVQ----------ATDRAGQQGALSSQVDLTILVLDVN 3231
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
DN P+ Y + E+ + +V++ A+ D+ P+ I+Y I +GN F ID
Sbjct: 3232 DNAPVFQRRDYAVTVPEDVAVGTEVVRVLATSADIGPNAEITYNIRSGNELGKFTIDRKW 3291
Query: 138 GSL 140
GS+
Sbjct: 3292 GSI 3294
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V I + +VNDN P+ + Y A + EN P++Q+ A D D + +
Sbjct: 2250 LTGAKSEVD--VDIVMLDVNDNPPLFQNTSYSAVLSENSMIGTPVLQVFAQDQDTEKNAV 2307
Query: 118 ISYKISAG--NPESYFNIDIGSG 138
+SY+I + N YF+ID SG
Sbjct: 2308 VSYQILSDIYNSTDYFSIDSNSG 2330
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V++ NDN+P VY A E S +VQ+ A D D + +++Y I AGN
Sbjct: 1528 ILVAVEDSNDNIPYFTSTVYDATAYETFSVGTSVVQVTALDKDNGLNGQLTYTIEAGNTG 1587
Query: 129 SYFNIDIGSG 138
F ID +G
Sbjct: 1588 GVFGIDNTTG 1597
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAG 125
+V I V +VNDN P+ +Y I E+ ++ I++ DG D ++ +S+ I+ G
Sbjct: 2909 VVTITVSDVNDNPPLFERELYRGAIKESDPLGEVVAILKTKDRDG-TDQNRLVSFCITGG 2967
Query: 126 NPESYFNIDIGSG 138
NP F + + G
Sbjct: 2968 NPRGVFGLALVQG 2980
>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
Length = 4589
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++ ++A D D D I + I G+ F ID +
Sbjct: 1054 VMTVSAHDEDTGRDGEIHFSIRGGSGIGIFKIDEEKGVIETAEKLDRETVSHYWLTVFAT 1113
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P + +YI+V++VNDN P T +PVYY +++EN + +VQ+ A D D +
Sbjct: 1114 DQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSND 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I +G
Sbjct: 1174 KLTYKITSGNPQGFFSIHPKTG 1195
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D + +++YKI++GNP+ +F+I + L
Sbjct: 1140 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1200 TSRKLDREQQNEHILEVTVTDDGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERD 1259
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1260 KPERERSAKREPIYRVIATDKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1308
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
I+Q++A+D D+ + I+Y +S E + N D G T
Sbjct: 3043 IMQVSATDADIRSNAEITYTLSGPGAEKFKLNADTGELKTFAPLDREQQAVYNLLVKATD 3102
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + V +++VNDN P + DP Y + EN P+ ++ A+D D + +I
Sbjct: 3103 GGGRFCQMSVVFTLEDVNDNAPEFSADP-YAITVFENTEPKTPLTRVQATDADAGLNHKI 3161
Query: 119 SYKISAGNPESYFNIDIGSG 138
+Y + + + F+ID SG
Sbjct: 3162 AYSL-VNSADGQFSIDESSG 3180
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 YSAEIPENIQLHSPVVHVQANSPE---GLKVFYSITEGDPFSQFTINFNTGVINVIAPLD 2244
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I V++VNDN P+ Y + E +
Sbjct: 2245 FESHPAYKLSIRATDSLTGVHAEVF--VDIIVEDVNDNPPVFAQQSYTTTLSEATVIGMS 2302
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D P++ ISY + +S +F+ID SG
Sbjct: 2303 VVQVHATDSDSVPNRGISYHLFENQTKSPDHFHIDGSSG 2341
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSDLTG---------------- 60
+ +VQ+ A+D D P++ ISY + +S +F+ID S L
Sbjct: 2301 MSVVQVHATDSDSVPNRGISYHLFENQTKSPDHFHIDGSSGLISLVRSLDYEEIQEHKLL 2360
Query: 61 --------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
P +IV + V ++NDN P+ +Y A+I E + + A D D
Sbjct: 2361 VRAVDSGMPPLSSDMIVTVDVTDLNDNPPLFDQLLYEAKISEQAPHGHFVTCVKAYDADS 2420
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN F ID +G
Sbjct: 2421 SDIDKLEYSILSGNEHKNFAIDSKTG 2446
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I+ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 737 IILMNATDLDSGFNGKLVYSISGGNDDSCFIIDLETGMLKVLSPLDRETTEKYTLNITVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ I+V + NDN P L Y+ ++ EN+ I+Q+ A+D DL +
Sbjct: 797 DLGIPQKAAWCLLDIRVLDANDNKPEFLQDNYFIEVSENRELNSEIIQIEATDKDLGLNG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+ Y + + F+ID +G
Sbjct: 857 EVKYYLLTDTDK--FSIDSETG 876
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+ DP Y + EN P+ ++ A+D D + +I+Y + + + F+ID S +
Sbjct: 3126 FSADP-YAITVFENTEPKTPLTRVQATDADAGLNHKIAYSL-VNSADGQFSIDESSGIIR 3183
Query: 59 ---------------------TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3184 LEKPLDRELQAVYNLILKAVDHGVPRRLTATGTVIVSVLDINDNPPVFEYREYGATVPED 3243
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 ILVGTEVLQVYAASRDIEVNAEITYAIISGNEHGKFSIDSTTGAI 3288
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
++Q+ A+ D++ + I+Y I +GN F+ID TG + YL V
Sbjct: 3250 VLQVYAASRDIEVNAEITYAIISGNEHGKFSID---STTGAIFIIDNLDYESSHEYYLTV 3306
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I V ++NDN P+ Y A I E+ +V + A D D
Sbjct: 3307 EATDGGTPSLNDVAAVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVVTVMADDADGP 3366
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN + F ID G +
Sbjct: 3367 SNNYIHYSIIDGNQGNPFTIDPVKGEI 3393
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2936 GVIAI--LSTTDADTEEINRQVTYYITGGDPLGQFAVENIQNEWKVYVKKPLDREKKDNY 2993
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G IV ++V + NDN P+ Y I E+ I+Q++A+D D+
Sbjct: 2994 LLTITATDGTFSSKAIVEVKVLDANDNSPICEKSAYSDTIPEDTVPGKLIMQVSATDADI 3053
Query: 113 DPDQRISYKISAGNPESY-FNIDIG 136
+ I+Y +S E + N D G
Sbjct: 3054 RSNAEITYTLSGPGAEKFKLNADTG 3078
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQS--------GILPIVQLAASDGDLDPDQRISY 120
V++ +Q+ NDNVP+ + Y I E+ S +P+V + A D D + + + Y
Sbjct: 1752 VWVHLQDENDNVPVFMQAEYTGLISESASINSVVLTDKNVPLV-IRAMDADKESNALLVY 1810
Query: 121 KISAGNPESYFNIDIGSGSL 140
+I + YF ID +G++
Sbjct: 1811 QIVEPSAHKYFAIDSSTGAI 1830
>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
Length = 4557
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++Q+ A D D D I Y I G+ F+ID
Sbjct: 1053 VKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDRETT 1112
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+D P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1113 KSYWLTVYATDHGVVPLYATIEVYIEVEDVNDNAPLTSEPIYYPSVMENSPKDVSVIQIQ 1172
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+ +G
Sbjct: 1173 AQDPDSSTNEKLAYRITSGNPQNFFVINPKTG 1204
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+ + L
Sbjct: 1148 LTSEPIYYPSVMENSPKDVSVIQIQAQDPDSSTNEKLAYRITSGNPQNFFVINPKTGLIT 1207
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1208 TTSRKLDREQQAEHFLEVTVSDGGTSPKQSSVWVVVQVLDENDNKPQFPEKVYQIKLPER 1267
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1268 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1312
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ Y IS GN +S FNIDI +
Sbjct: 746 ILRIKAYDADSGFNGKVVYTISDGNADSCFNIDIETGVLKVLMPLDREKTDLYILNITIY 805
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V + NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 806 DLGNPQKSAWRLLTVTVGDANDNKPIFLQDSYSVNILESTSLGTEIIQVEARDKDLGSNG 865
Query: 117 RISYKI 122
++Y +
Sbjct: 866 EVTYSV 871
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D D+ +++++Y + A + + YF++D S +
Sbjct: 3137 YTACVYENTATKALLTRVQATDPDVGVNRKVTYSL-ADSADGYFSVDRSSGIIILEHPLD 3195
Query: 59 ----------TGGPDQV-------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 3196 RELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 3255
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN + FNI+ +G++
Sbjct: 3256 VLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAI 3294
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 2190 PFYTASVNEDVEIHTPILSINATSPE---GQGIIYIIVEGDPHNQFNIDFDTGVLSVISP 2246
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + + +VNDN P+ Y A + E
Sbjct: 2247 LDYEINSLFKLMVRASDALTGARAEV--TVDLVINDVNDNPPVFDQSAYNATLSEASLIG 2304
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ A+D D D ++ + Y+I N YF+ID SG
Sbjct: 2305 TPVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSTSG 2345
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y + E+ S ++ + A+ D+ + I+Y I +GN + FNI+ + D
Sbjct: 3242 YLVTVPEDTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISISESLD 3301
Query: 58 LTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D YL+V + V +VNDN P VY A I E+ +
Sbjct: 3302 YESCKD-FYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISEDAAIGDS 3360
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L A D D + +I + I +G+ ++ F++D GSG
Sbjct: 3361 VIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSG 3397
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG---------------- 61
P++Q+ A+D D D ++ + Y+I N YF+ID S L
Sbjct: 2306 PVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSTSGLILTARMLDHELIQQCSLKV 2365
Query: 62 --------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P ++V I + ++NDN P+ +Y + + E + + ASD D
Sbjct: 2366 RATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSS 2425
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN + F +D SG
Sbjct: 2426 DFDRLEYSILSGNDRTSFIMDSKSG 2450
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY A I E+ + ++ L A D D + +I + I +G+ ++ F++D GS L ++
Sbjct: 3346 VYSAVISEDAAIGDSVIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSGLVKVKKKL 3405
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V + + +VNDN P+ Y A I EN+
Sbjct: 3406 DRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQENKPVGTS 3465
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D ++ I GN E F +D
Sbjct: 3466 ILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLD 3499
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1553 VIINVEDSNDHSPYFTSPLYEASVYESAAVGSAVLQVTALDKDKGENAELVYTIEAGNTG 1612
Query: 129 SYFNID 134
+ F I+
Sbjct: 1613 NTFKIE 1618
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ +++VNDN P+ Y A + EN + + ++ A+D D+ +++++Y + A + +
Sbjct: 3118 IHLILEDVNDNPPVFSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSL-ADSAD 3176
Query: 129 SYFNIDIGSG 138
YF++D SG
Sbjct: 3177 GYFSVDRSSG 3186
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L+ + A +++ SG + ++ D D + D ++ + A D+G L+
Sbjct: 2860 LEKITEAFTIDSNSGWISTLK----DLDHEKDPTFTFAVVAS--------DLGETLSLSS 2907
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYK 121
+V + V ++NDN P+ VY + E+ + L+ D D D ++++SY
Sbjct: 2908 TT---LVSVAVTDINDNAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYH 2964
Query: 122 ISAGNPESYFNI 133
I+ GNP+ F +
Sbjct: 2965 ITGGNPKGKFAL 2976
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------- 55
P Y A V+ + G L I ++ A D D D + +SY + +F ID G
Sbjct: 2089 PYYAAVQVDAEPGTL-IYRVTAIDKDKDENGDVSYLLKED--YGHFEIDRGTGSVTLKEA 2145
Query: 56 --SDLT------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SDL+ GG + V + + VN +P+ P Y A + E+ P
Sbjct: 2146 FNSDLSNIEYLVVILAKDGGNPSLSASVELPITIVNKAMPVFDKPFYTASVNEDVEIHTP 2205
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A+ + Q I Y I G+P + FNID +G L
Sbjct: 2206 ILSINATSPE---GQGIIYIIVEGDPHNQFNIDFDTGVL 2241
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAG--------N 45
VY A++ EN + ++ + A+DGD +ISY I S G +
Sbjct: 2501 VYVAEVRENAAPGTKVLHVKATDGDSGVYGQISYSIINDFAKDRFLIDSNGQILTTERLD 2560
Query: 46 PESYFNIDIG---SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
E+ DIG L GG + V + V + NDN P + Y A + + +
Sbjct: 2561 RENLLESDIGIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVKADVGKGYLV 2620
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2621 TQVQAVDPDDGANSRITYSL 2640
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + D +
Sbjct: 1054 VMTVSAYDEDEGRDGEIRYSIRDGSGMGVFRIDEEKGIIETADHLDRETTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V +VNDN P T +PVYY +++EN + ++Q+ A D D +
Sbjct: 1114 DQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSE 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1174 KLTYKITSGNPQGFFSINPKTG 1195
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +++EN + ++Q+ A D D ++++YKI++GNP+ +F+I+ + L
Sbjct: 1140 TTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGFFSINPKTGLITT 1199
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQI---- 92
G P Q + V ++V + NDN P L Y ++
Sbjct: 1200 TSRKLDREQQAEHILEVTVTDNGIPAQSTVARVIVKVLDENDNKPQFLQKFYKIRLPERG 1259
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1260 KPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1308
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAA----------SDGDLDPDQRISYKISAG---------- 44
P Y A+I EN P+V + A S D DP + + G
Sbjct: 2186 PFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITDGDPFNQFMINFNTGVINVVAPLDF 2245
Query: 45 --NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+P NI LTG V+ V I V+++NDN P+ + Y + E P+
Sbjct: 2246 ESHPAYKLNIRATDSLTGAHADVF--VDIIVEDINDNAPVFTEQSYAVTLSEASVIGTPV 2303
Query: 103 VQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
VQ++A+D D ++ ISY + + ES YF+ID +G
Sbjct: 2304 VQVSATDADSGTNRGISYHLVEDDTESHDYFHIDSSTG 2341
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDL 58
Y A + E+ ++Q+ A+ D++ + I+Y I +GN F+ID I S
Sbjct: 3236 YSASVSEDTVVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIDSLD 3295
Query: 59 TGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL V I V ++NDN P+ Y A I E+ +
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSV 3355
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I Y I+ GN + F ID G +
Sbjct: 3356 ITVMADDADGPSNNHIHYTITDGNQGNPFTIDPSRGEI 3393
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---D 57
T+DP Y + EN + ++ A+D D +++I Y + + E F+ID S
Sbjct: 3126 FTVDP-YSITVFENTEPKTLLTRVQATDADAGMNRKIHYSL-VNSAEGQFSIDEFSGIIR 3183
Query: 58 LTGGPDQVYLIVY----------------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
L D+ VY + V ++NDN P+ Y A + E+
Sbjct: 3184 LEKPLDRELQAVYTLTLRATDEGLPRRLSSTSNLIVSVLDINDNPPVFEYREYSASVSED 3243
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 TVVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAI 3288
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
++ E+Q I+ + A+D D + ++ Y IS GN +S F +D+ S
Sbjct: 726 EVREDQPVGSSIILMNATDLDTGFNGKLVYVISGGNEDSSFIVDMESGMLKILSPLDREV 785
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ I++ + NDN P L Y+ ++ EN+ I+Q+
Sbjct: 786 KDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSYFVEVSENKELDSEIIQI 845
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + + Y +
Sbjct: 846 EATDKDLGANGEVKYSL 862
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + D G T P D+ VY
Sbjct: 3043 IMQVSATDADIRSNAEITYTLHGPGAEKFRLTADTGELKTLMPLDREQQAVYYLLVKATD 3102
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P T+DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRFCQANIILTLEDVNDNAPEFTVDP-YSITVFENTEPKTLLTRVQATDADAGMNRKI 3161
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + E F+ID SG
Sbjct: 3162 HYSL-VNSAEGQFSIDEFSG 3180
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSDLT------------------ 59
P+VQ++A+D D ++ ISY + + ES YF+ID + L
Sbjct: 2302 PVVQVSATDADSGTNRGISYHLVEDDTESHDYFHIDSSTGLILTTRALDYEKIQQHKLLI 2361
Query: 60 ----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
GG P +V + V ++NDN P+ VY A+I E + + ASD D
Sbjct: 2362 RAVDGGMLPLSSDTVVTVDVTDLNDNPPLFNQLVYEAKISELAPRGHFVTCVQASDADRS 2421
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
++ Y I GN + F I+ +G
Sbjct: 2422 DADKLEYSILTGNDQKNFIINSKTG 2446
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + + D++
Sbjct: 1051 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESAPHYWLTVYAT 1110
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +Y++V++VNDN P T +PVYY +++EN + +VQ+ A D D
Sbjct: 1111 DQGVVPLSSFVEIYVEVEDVNDNAPRTSEPVYYPEVMENSPKDVSVVQIDALDPDSSSSD 1170
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I +G
Sbjct: 1171 KLTYKITSGNPQGFFSIHPRTG 1192
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D +++YKI++GNP+ +F+I + L
Sbjct: 1137 TSEPVYYPEVMENSPKDVSVVQIDALDPDSSSSDKLTYKITSGNPQGFFSIHPRTGLITT 1196
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1197 TSRRLDREQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQFLQKFYKIRLPERE 1256
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1257 KPERERTTKREPIYRVIATDKDEGPNAEISYSIEEGNEHGRFFIEPKTG 1305
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2183 PFYSAEIPENIQVHSPVVHIQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2239
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V++VNDN P+ + Y A + E
Sbjct: 2240 LDFESHPAYKLSVRATDSLTGAHAEVF--VDIVVEDVNDNPPVFVQQSYAATLSEASVIG 2297
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSG 138
+VQ+ A+D D +P++ +SY + + +SY F++D +G
Sbjct: 2298 TSVVQVRATDSDSEPNRGVSYHMFGNHSKSYDHFHVDSSTG 2338
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN+ IV + A+D D + ++ Y IS GN +S F ID+
Sbjct: 723 EVKENRPVGSSIVLVNATDLDTGFNGKLVYAISGGNEDSCFLIDMDTGMLKILSPLDRET 782
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ ++V + NDN P Y+ ++ E++ I+Q+
Sbjct: 783 TDKYTLNITVSDLGIPQKAAWHLLAVRVLDANDNPPEFFQESYFVEVSEDKEVNSEIIQV 842
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ +++Y +
Sbjct: 843 EATDRDLGPNGQVTYSL 859
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDL-----T 59
YA + S I +VQ+ A+D D +P++ +SY + + +SY F++D + L T
Sbjct: 2286 YAATLSEASVIGTSVVQVRATDSDSEPNRGVSYHMFGNHSKSYDHFHVDSSTGLISLVRT 2345
Query: 60 GGPDQVY-------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+QV+ +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2346 LDYEQVHQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEARISEHAMHGH 2405
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F +D +G
Sbjct: 2406 FVTCVKAYDADSSDVDKLEYSILSGNDHKNFVMDSETG 2443
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDL 58
Y A + E+ ++Q+ A+ D++ + I+Y I +GN F+ID I S
Sbjct: 3233 YSASVSEDTLIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDPRTGAIFLIESLD 3292
Query: 59 TGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL V + V ++NDN P+ Y A I E+ P+
Sbjct: 3293 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDPYTAVISEDAVLEQPV 3352
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I Y I GN S F ID G +
Sbjct: 3353 ITVMADDADGPLNSHIHYSIIDGNQGSPFTIDPARGEV 3390
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------NPE 47
Y+ ++ E++ I+Q+ A+D DL P+ +++Y + +PE
Sbjct: 825 YFVEVSEDKEVNSEIIQVEATDRDLGPNGQVTYSLLTDTDTFSIDSVTGVVTVVRPLDPE 884
Query: 48 ----SYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y ++ T P Q++ +++ + V++VNDN P + P Y ++ E+
Sbjct: 885 VQHVHYLKVEARDQATEEP-QLFSTVLLKVSVEDVNDNPPRFIPPNYRVKVREDLPEGTI 943
Query: 102 IVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSGSL 140
I+ L A D DL ++ Y S +P E F++D SG++
Sbjct: 944 IMWLEAYDPDLGQSSQVRY--SLLDPGEGNFDVDKLSGAV 981
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVENQ G ++Q+ ASD D + ++ Y +
Sbjct: 2793 VSIQVKDANDNSPVLESNPYEAFIVENQPGGSRVIQVRASDLDSGTNGQVMYSL 2846
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3214 VVVSVLDINDNPPVFEYREYSASVSEDTLIGTEVLQVYAASRDIEANAEITYSIISGNEH 3273
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3274 GKFSIDPRTGAI 3285
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++ L A D D D + Y I G+ F ID
Sbjct: 1024 VMTLTAEDEDKGRDGEVRYSIRDGSGLGIFTIDEETGVIRTQELLDHETTPHYWLTVYAM 1083
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P ++ VY++VQ+VNDN P T +PVYY ++EN + I+Q+ A D D
Sbjct: 1084 DRGVVPLSTFVEVYVEVQDVNDNAPQTSEPVYYPSVMENSPKDVSIIQINAIDPDTKASD 1143
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++SY+I++GNP+ +F I+ +G
Sbjct: 1144 KLSYRITSGNPQGFFAINGRTG 1165
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY ++EN + I+Q+ A D D ++SY+I++GNP+ +F I+ + L
Sbjct: 1110 TSEPVYYPSVMENSPKDVSIIQINAIDPDTKASDKLSYRITSGNPQGFFAINGRTGLITT 1169
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + V +QV + NDN P+ L+ +Y ++ E +
Sbjct: 1170 TSRKLDREQQDEHILEITVTDHGVPAKSTTVRVIVQVLDENDNRPLFLEKIYKIKLPERE 1229
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ ASD D P+ ISY I G+ F I+ +G
Sbjct: 1230 KPEKERATKRDPVYRVIASDRDDGPNAEISYSIEEGDENGKFFIEPKTG 1278
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y +I EN P++ + A+D + R+ Y IS G+P F+ID +
Sbjct: 2160 YTIEIPENIQLHTPVLHVQANDSE---GPRVVYTISEGDPFKQFSIDFNTGVVHVVQPLD 2216
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I +++VNDN P+ L Y A + E +
Sbjct: 2217 FETHPAYKLSVRATDSLTGAHSEVF--VDIILEDVNDNAPVFLSKTYRANVSEASVIGMH 2274
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
I+Q+ A D D +Q + +++ G F ID +G
Sbjct: 2275 ILQVDAKDADTGNNQDVFFQLVEEKGRSSDLFTIDRDTG 2313
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E+ + ++++ A+ D + + ISY I +GN F++D
Sbjct: 3209 YTATVSEDVTAGTQLLRVQAASRDTEANGEISYGIISGNEHGLFSVDPRSGDVFVIEPLD 3268
Query: 54 --------IGSDLTGG---PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + T G P V I + +VNDN P+ VY A + E+ +
Sbjct: 3269 YEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSEDTELGRTV 3328
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D ++ Y I AGN S F ID G L
Sbjct: 3329 ATVNAEDLDGPSHSQVRYSIVAGNQGSPFTIDAARGEL 3366
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQ---SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------- 53
VY + E+ SG++ I+ D + D +++++Y I+ G+P F I+
Sbjct: 2896 VYKGTVSEDDPPPSGVIAILSTTDDDSE-DINKQVNYFITGGDPLGQFAIEHIQNEWKVF 2954
Query: 54 IGSDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ L YL+ V ++V + NDN P +Y + EN
Sbjct: 2955 VRKPLDREEKDNYLLNITASDGIFTAKATVEVKVLDANDNSPRCEKALYSESVPENSPAG 3014
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q++ASD D+ + I+Y++ E F ID +G L
Sbjct: 3015 RLILQVSASDADIRSNAHITYELQGAGSE-LFIIDSDTGEL 3054
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 34/146 (23%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY-------------- 66
IV L+A+D D + ++ Y IS GN S+F +D+ S G QVY
Sbjct: 707 IVHLSATDADSGFNGKLVYVISGGNTGSHFVVDMES----GWLQVYSPLDREAVDSYTLN 762
Query: 67 LIVY--------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ VY +++ + NDN P L Y QI E I+Q+ +SD D
Sbjct: 763 ITVYDLGIPQKSSSRLLGVKILDANDNSPQFLQDSYSVQISEGTPVGTEIIQVDSSDKDQ 822
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
+ + Y I G +F ID +G
Sbjct: 823 GNNGVVLYSILGGT--DHFAIDANTG 846
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+V I V ++NDN P+ Y A + E+ + ++++ A+ D + + ISY I +GN
Sbjct: 3188 CLVVISVLDINDNPPVFEHREYTATVSEDVTAGTQLLRVQAASRDTEANGEISYGIISGN 3247
Query: 127 PESYFNIDIGSG 138
F++D SG
Sbjct: 3248 EHGLFSVDPRSG 3259
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-NIDIGSDLT----- 59
+Y + EN I+Q++ASD D+ + I+Y++ E + + D G T
Sbjct: 3002 LYSESVPENSPAGRLILQVSASDADIRSNAHITYELQGAGSELFIIDSDTGELKTSQPLD 3061
Query: 60 ---------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG V++ V++VNDN P Y + EN + +
Sbjct: 3062 REEQEEHRFTMRAVDGGGRYCEADVHVSVEDVNDNPPQFSSDPYTFTVFENTEIGTYVAK 3121
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L ASD D+ + I Y + + + +F+ID +G
Sbjct: 3122 LLASDIDVGLNSDIVYSL-LDSADGFFSIDEQTG 3154
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V + NDN P + Y ++ E+ + ++Q+ A D D + I+Y + +GN
Sbjct: 1521 VIVNVDDTNDNAPWFVGTPYSGRVFESAAVGSAVLQVTARDKDKGHNAEIAYSLESGNFA 1580
Query: 129 SYFNID 134
+ F ID
Sbjct: 1581 NTFAID 1586
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I +++VNDN P + P Y ++ E+ I+ L A D D+ P ++ Y + N + +
Sbjct: 886 ISLEDVNDNPPKFVPPNYRVKVREDLPIGTVIMWLEAHDPDIGPSSQVRYSL-VDNGDGH 944
Query: 131 FNIDIGSGSL 140
F +D SG+L
Sbjct: 945 FEVDKLSGAL 954
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V ++V +VND P+ +Y A ++ + ++Q+ A+D D P+ ++ IS GN
Sbjct: 1838 VTVEVIDVNDCPPVFSQKMYEATVIVPTYKGVEVIQINATDSDSRPNSKLLLSISEGNIG 1897
Query: 129 SYFNIDIGSG 138
F +D +G
Sbjct: 1898 EKFRMDPATG 1907
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
++V + V ++NDN P Y + I E I Q+ ASD D ++ + ++GN
Sbjct: 2347 VLVTVDVTDLNDNAPEFTQNTYNSTISELAPRGHFITQVQASDADSSDKDKLLFFFTSGN 2406
Query: 127 PESYFNIDIGSGSL 140
+ F+ID +G++
Sbjct: 2407 EDLNFSIDKHTGAI 2420
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D DL + ++ Y+
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYR 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F + +G
Sbjct: 1178 ITSGNPQGFFAVHPKTG 1194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D DL + ++ Y+I++GNP+ +F + + L
Sbjct: 1139 TSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 PFYSAEIAENVQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2245 LDFEAHPAYKLNIRATDSLTGAHAEVF--VDIIVEDINDNAPVFAQQSYAATLSEASVIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ +S +F++D +G
Sbjct: 2303 TSVVQVRATDSDSEPNRGISYQLFGNLSKSHDHFHVDSSTG 2343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSATG 875
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +VQ+ A+D D +P++ ISY++ +S+ F++D + L
Sbjct: 2291 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQLFGNLSKSHDHFHVDSSTGLISLLRT 2350
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2351 LDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2410
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN +F ID +G
Sbjct: 2411 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSATG 2448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAG------- 44
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + G
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKIMHP 882
Query: 45 -----NPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLAQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2798 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSL 2851
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 18 ILP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-- 70
+LP I+Q++A+D D+ + I+Y +S E + N D G T P D+ VY
Sbjct: 3039 VLPGKLIMQISAADADIRSNAEITYTLSGSGAEKFQLNPDTGELKTSAPLDREEQAVYHL 3098
Query: 71 -----------------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ +++VNDN P + DP Y + EN + ++ A+D D
Sbjct: 3099 LVRATDRGGRFCQASIVLTLEDVNDNAPEFSADP-YAITVFENTEPGTLLTRVQATDADS 3157
Query: 113 DPDQRISYKI 122
+++I Y +
Sbjct: 3158 GLNRKILYSL 3167
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 33/148 (22%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2938 GVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNY 2995
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASD 109
+ T G IV ++V + NDN P+ +Y I E+ +LP I+Q++A+D
Sbjct: 2996 LLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---VLPGKLIMQISAAD 3052
Query: 110 GDLDPDQRISYKISAGNPESY-FNIDIG 136
D+ + I+Y +S E + N D G
Sbjct: 3053 ADIRSNAEITYTLSGSGAEKFQLNPDTG 3080
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLI---- 68
++Q+ A+ D++ + I+Y I +GN F+ID + + YL
Sbjct: 3252 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEAT 3311
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ Y A + E+ ++ + A D D +
Sbjct: 3312 DGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPSNS 3371
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN F ID
Sbjct: 3372 HIHYSIIDGNQGGPFTID 3389
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3219 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3278
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3279 GKFSIDSKTGAV 3290
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1868 VTIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1927
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1928 EKFSMDYKTGAL 1939
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D DL + ++ Y+
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYR 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F + +G
Sbjct: 1178 ITSGNPQGFFAVHPKTG 1194
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D DL + ++ Y+I++GNP+ +F + + L
Sbjct: 1139 TSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 PFYSAEIAENVQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNAPVFAQQSYAATLSEASVIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++S +S +F++D +G
Sbjct: 2303 TSVVQVRATDADSEPNRGISYQLSGNLSKSHDHFHVDSSTG 2343
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++S +S+ F++D + L
Sbjct: 2305 VVQVRATDADSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVR 2364
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2365 AVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2424
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2425 IDKLQYSILSGNDHKHFIIDSATG 2448
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSATG 875
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I +P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKITHP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2798 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSL 2851
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLI---- 68
++Q+ A+ D++ + I+Y I +GN F+ID + + YL
Sbjct: 3252 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEAT 3311
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ Y A + E+ ++ + A D D +
Sbjct: 3312 DGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPSNS 3371
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN F ID
Sbjct: 3372 HIHYSIIDGNQGGPFTID 3389
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3219 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3278
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3279 GKFSIDSKTGAV 3290
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1868 VTIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1927
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1928 EKFSMDYKTGAL 1939
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D DL + ++ Y+
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYR 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F + +G
Sbjct: 1178 ITSGNPQGFFAVHPKTG 1194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D DL + ++ Y+I++GNP+ +F + + L
Sbjct: 1139 TSEPVYYPEILENSPKDVSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTG 1307
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENVQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNAPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++S +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQLSGNLSKSHDHFHVDSSTG 2340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +VQ+ A+D D +P++ ISY++S +S+ F++D + L
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRT 2347
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2348 LDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN +F ID +G
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSATG 2445
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSATG 875
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAG------- 44
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + G
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKIMHP 882
Query: 45 -----NPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLAQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSL 2848
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 18 ILP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-- 70
+LP I+Q++A+D D+ + I+Y +S E + N D G T P D+ VY
Sbjct: 3036 VLPGKLIMQISAADADIRSNAEITYTLSGSGAEKFQLNPDTGELKTSAPLDREEQAVYHL 3095
Query: 71 -----------------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ +++VNDN P + DP Y + EN + ++ A+D D
Sbjct: 3096 LVRATDRGGRFCQASIVLTLEDVNDNAPEFSADP-YAITVFENTEPGTLLTRVQATDADS 3154
Query: 113 DPDQRISYKI 122
+++I Y +
Sbjct: 3155 GLNRKILYSL 3164
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 33/148 (22%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2935 GVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNY 2992
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASD 109
+ T G IV ++V + NDN P+ +Y I E+ +LP I+Q++A+D
Sbjct: 2993 LLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---VLPGKLIMQISAAD 3049
Query: 110 GDLDPDQRISYKISAGNPESY-FNIDIG 136
D+ + I+Y +S E + N D G
Sbjct: 3050 ADIRSNAEITYTLSGSGAEKFQLNPDTG 3077
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLI---- 68
++Q+ A+ D++ + I+Y I +GN F+ID + + YL
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEAT 3308
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ Y A + E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSEDAVLEQSVITVLADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN F ID
Sbjct: 3369 HIHYSIIDGNQGGPFTID 3386
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSMDYKTGAL 1936
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
++ ++A D D D I Y I G+ F ID + D++
Sbjct: 1054 VMTVSAYDEDEGRDGEIRYSIRDGSGIGVFRIDEEKGIIETADRLDRETTSHYWLTVYAT 1113
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ +YI+V +VNDN P T +PVYY +++EN + ++Q+ A D D +
Sbjct: 1114 DQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSE 1173
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F+I+ +G
Sbjct: 1174 KLTYKITSGNPQGFFSINPKTG 1195
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + ++Q+ A D D ++++YKI++GNP+ +F+I+ + L
Sbjct: 1140 TTEPVYYPEVMENSPKDVSVIQIEAFDPDSSSSEKLTYKITSGNPQGFFSINPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V ++V + NDN P L Y Q+
Sbjct: 1200 TSRKLDREQQGEHILEVMVTDNGIPPKSTIARVIVKVLDENDNKPQFLQKFYKIQLPERG 1259
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1260 KPERERTARREPIYRVIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2186 PFYSAEIPENIQLHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVVNVVAP 2242
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V+ V I V+++NDN P+ + Y A + E
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHADVF--VDIIVEDINDNPPVFTEQSYTATLSEASVIG 2300
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ++A+D D ++ ISY + N ES YF+ID +G
Sbjct: 2301 TSVVQVSATDADSGTNRGISYHLVEDNSESHDYFHIDSSTG 2341
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---D 57
T DP Y + EN + ++ A+D D +++I Y + + E F+ID S
Sbjct: 3126 FTADP-YSITVFENTEPKTLLTRVQATDADAGMNRKIHYSL-VNSAEGQFSIDEFSGIIR 3183
Query: 58 LTGGPDQVYLIVY----------------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
L D+ VY + V ++NDN P+ Y A + E+
Sbjct: 3184 LEKPLDRELQAVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEHREYSASVSED 3243
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3244 VLVGTEVLQIYAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAI 3288
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
++ E+Q I+ ++A D D + ++ Y IS GN +S F +D+
Sbjct: 726 EVREDQPVGSSIILMSAIDLDTGFNGKLVYVISGGNEDSSFIVDMERGVLKILSPLDREV 785
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ I++ + NDN P L Y+ ++ EN+ I+Q+
Sbjct: 786 KDKYTLNITVYDLGVPQKSAWHLLDIKILDANDNAPEFLQDSYFVELNENKEPNSEIIQI 845
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL + + Y +
Sbjct: 846 EATDKDLGANGEVKYSL 862
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-------- 70
I+Q++A+D D+ + I+Y + E + D G T P D+ VY
Sbjct: 3043 IMQVSATDADIRSNAEITYTLHGTGAEKFRLTPDTGELKTSMPLDREQQAVYYLLVKATD 3102
Query: 71 -----------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ +++VNDN P T DP Y + EN + ++ A+D D +++I
Sbjct: 3103 GGGRFCQANIILTLEDVNDNAPEFTADP-YSITVFENTEPKTLLTRVQATDADAGMNRKI 3161
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + E F+ID SG
Sbjct: 3162 HYSL-VNSAEGQFSIDEFSG 3180
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDL 58
Y A + E+ ++Q+ A+ D++ + I+Y I +GN F+ID I S
Sbjct: 3236 YSASVSEDVLVGTEVLQIYAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIESLD 3295
Query: 59 TGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL V I V ++NDN P+ Y A I E+ +
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAILEQSV 3355
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I Y I GN + F ID G +
Sbjct: 3356 ITVMADDADGPSNNCIHYTIIDGNQGNPFTIDPTRGEI 3393
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 26/138 (18%)
Query: 17 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + R +SY I+ G+P F I+
Sbjct: 2936 GVIAI--LSTTDADTEEANRQVSYYITGGDPLGQFAIENIQNEWKVYVKKPLDREEKDNY 2993
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G +V ++V + NDN P+ +Y + E+ I+Q++A+D D+
Sbjct: 2994 LLNITATDGTFATRAVVEVKVLDANDNSPVCEKALYTDSVPEDALPGKLIMQVSATDADI 3053
Query: 113 DPDQRISYKISAGNPESY 130
+ I+Y + E +
Sbjct: 3054 RSNAEITYTLHGTGAEKF 3071
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
Y+ ++ EN+ I+Q+ A+D DL + + Y + +
Sbjct: 828 YFVELNENKEPNSEIIQIEATDKDLGANGEVKYSLLTDTDKFTINAVTGVVKVVGVLDRE 887
Query: 48 ----SYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ I+ T P Q++ +I+ + V++VNDN P + Y+ +I E+
Sbjct: 888 EQHVHFLKIEARDQPTEEP-QLFSTVILKVSVEDVNDNPPKFIPSNYHVKIREDLPEGTI 946
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + +S F++D SG++
Sbjct: 947 IMWLEAYDPDLGQSSQVRYSL-LDSGDSTFDVDKLSGAI 984
>gi|229442259|gb|AAI72772.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 990
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 28 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 87
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 88 ITSGNPQGFFSIHPKTG 104
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 49 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 108
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 109 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 168
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ + A+D D P+ ISY I GN F I+ +G
Sbjct: 169 KPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 217
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFENHSKSHDHFHVDSSTG 2340
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVTVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFENHSKSHDHFHVDSSTGLISLLRT 2347
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN +F ID +G
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATG 2445
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVKIARS 882
Query: 46 ------PESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
E Y I+ P ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEPQLSSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLPE 942
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 943 GTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 S-------GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D P+ +SY I GN F I+ +G
Sbjct: 1259 KPDRERNGRREPLYRVIATDKDEGPNAEVSYSIEDGNEHGKFFIEPKTG 1307
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNSPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ + A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-------- 54
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I F+ID
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTDT--DTFSIDSVTGVVNIA 880
Query: 55 ----------------GSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 881 RPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDL 940
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 941 PEGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2922 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 2979
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 2980 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 3036
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 3037 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 3077
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFGQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNLSKSHDHFHVDSSTG 2340
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ E+Q ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKESQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 ADKYTLNVTVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNLSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +G+ +F ID +G
Sbjct: 2422 IDKLQYSILSGSDHKHFVIDSATG 2445
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDAFSIDSVTGVVKITRP 882
Query: 46 ------PESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ +I+ + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVILKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAQDPDLGQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIVDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDIVVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 26/130 (20%)
Query: 18 ILP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-- 70
+LP I+Q++A+D D+ + I+Y + E + N D G T P D+ VY
Sbjct: 3036 VLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELRTSTPLDREEQAVYHL 3095
Query: 71 -----------------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ +++VNDN P ++DP Y + EN + + A+D D
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSVDP-YAVTVFENTEPGTLLTRAQATDADT 3154
Query: 113 DPDQRISYKI 122
+++I Y +
Sbjct: 3155 GLNRKILYSL 3164
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKI 122
I+ L A D DL ++ Y +
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL 966
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2303 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2343
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2305 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2364
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++N N P+ +Y A+I E+ + + A D D
Sbjct: 2365 AVDGGMPTLSSDVIVTVDVTDLNGNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2424
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2425 IDKLQYSILSGNDHKHFVIDSATG 2448
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHSLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3251 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3310
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3311 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3370
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3371 HIHYSIIDGNQGSSFTID 3388
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2797 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2850
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2924 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 2981
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 2982 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 3038
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 3039 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 3079
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3218 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3277
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3278 GKFSIDSKTGAV 3289
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + +D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSVDYKTGAL 1936
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ + A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2305 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2364
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2365 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2424
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2425 IDKLQYSILSGNDHKHFVIDSATG 2448
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2188 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2303 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2343
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHSLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3252 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3311
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3312 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3371
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3372 HIHYSIIDGNQGSSFTID 3389
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2925 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 2982
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 2983 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 3039
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 3040 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 3080
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2798 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2851
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3219 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3278
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3279 GKFSIDSKTGAV 3290
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ + A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I + P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E I+ P Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHSLKIEARDQAREEP-QLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2922 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 2979
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 2980 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 3036
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 3037 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 3077
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------I 54
I+ ++A D D D + Y I G+ F ID
Sbjct: 1050 FSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPHYWLTVY 1109
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+D P ++ +YI+V++VNDN P T +PVYY +I+EN + +V + A D D
Sbjct: 1110 ATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVHIEAFDPDSSS 1169
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ ++ YKI++GNP+ +F++ +G
Sbjct: 1170 NDKLMYKITSGNPQGFFSVHPKTG 1193
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +V + A D D + ++ YKI++GNP+ +F++ + L
Sbjct: 1138 TSEPVYYPEIIENSPKDVSVVHIEAFDPDSSSNDKLMYKITSGNPQGFFSVHPKTGLITT 1197
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1198 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1257
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1258 RPERERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1306
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN I+ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 724 EVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 783
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ ++V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 784 TDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 843
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y +
Sbjct: 844 EATDKDLGPNGHVTYSV 860
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A++ EN P+V + A D ++ Y I+ G+P S F ++ +
Sbjct: 2184 PFYSAEVPENVQLHSPVVHIQA---DSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAP 2240
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V+ I V+++ND+ P+ + Y + E
Sbjct: 2241 LDFESHPAYKLSIRATDSLTGAHADVF--ADIIVEDINDSPPVFVHQSYATTLSEASVIG 2298
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2299 TSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2339
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +VQ+ A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2287 YATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2346
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2347 LDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGH 2406
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2407 FVTCVKAYDADSSDVDKLDYSILSGNDHKNFVIDRVTG 2444
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--------------------- 41
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y +
Sbjct: 822 LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSVLTDTDKFSIDGVTGVVKVMRP 881
Query: 42 --SAGNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
Y I+ P + +++ + +++VNDN P + P Y ++ E+
Sbjct: 882 LDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKVREDLPE 941
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E +F++D SG++
Sbjct: 942 GTIIMWLEAYDPDLGQSSQVRYSL-LDHGEGHFDVDKLSGAV 982
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD----------------------L 58
++Q+ A D++ + I+Y I +GN F+ID + +
Sbjct: 3248 VLQVYAVSRDIEANAEITYSIMSGNEHGKFSIDSRTGAIFVIENLDYESSREYYLTIEAM 3307
Query: 59 TGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG + V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3308 DGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDALLEQSVITVMADDADGPSNS 3367
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F +D G +
Sbjct: 3368 HIRYSIIDGNQGSPFTVDPTRGEV 3391
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------I 54
I+ ++A D D D + Y I G+ F ID
Sbjct: 1050 FSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPHYWLTVY 1109
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+D P ++ +YI+V++VNDN P T +PVYY +I+EN + +V + A D D
Sbjct: 1110 ATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVHIEAFDPDSSS 1169
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ ++ YKI++GNP+ +F++ +G
Sbjct: 1170 NDKLMYKITSGNPQGFFSVHPKTG 1193
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +V + A D D + ++ YKI++GNP+ +F++ + L
Sbjct: 1138 TSEPVYYPEIIENSPKDVSVVHIEAFDPDSSSNDKLMYKITSGNPQGFFSVHPKTGLITT 1197
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1198 TSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1257
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1258 RPERERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1306
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------- 55
++ EN I+ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 724 EVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 783
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL + ++ ++V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 784 TDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSEDKEINSEIIQV 843
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y +
Sbjct: 844 EATDKDLGPNGHVTYSV 860
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A++ EN P+V + A D ++ Y I+ G+P S F ++ +
Sbjct: 2190 PFYSAEVPENVQLHSPVVHIQA---DSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAP 2246
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG V+ I V+++ND+ P+ + Y + E
Sbjct: 2247 LDFESHPAYKLSIRATDSLTGAHADVF--ADIIVEDINDSPPVFVHQSYATTLSEASVIG 2304
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + + +S +F+ID +G
Sbjct: 2305 TSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTG 2345
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
YA + S I +VQ+ A+D D +P++ ISY + + +S+ F+ID + L
Sbjct: 2293 YATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2352
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P +IV + V ++NDN P+ +Y A+I E+
Sbjct: 2353 LDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGH 2412
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN F ID +G
Sbjct: 2413 FVTCVKAYDADSSDVDKLDYSILSGNDHKNFVIDRVTG 2450
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--------------------- 41
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y +
Sbjct: 822 LQESYFVEVSEDKEINSEIIQVEATDKDLGPNGHVTYSVLTDTDKFSIDGVTGVVKVMRP 881
Query: 42 --SAGNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
Y I+ P + +++ + +++VNDN P + P Y ++ E+
Sbjct: 882 LDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKVREDLPE 941
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E +F++D SG++
Sbjct: 942 GTIIMWLEAYDPDLGQSSQVRYSL-LDHGEGHFDVDKLSGAV 982
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD----------------------L 58
++Q+ A D++ + I+Y I +GN F+ID + +
Sbjct: 3254 VLQVYAVSRDIEANAEITYSIMSGNEHGKFSIDSRTGAIFVIENLDYESSREYYLTIEAM 3313
Query: 59 TGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG + V I V ++NDN P+ Y A + E+ ++ + A D D +
Sbjct: 3314 DGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSEDALLEQSVITVMADDADGPSNS 3373
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN S F +D G +
Sbjct: 3374 HIRYSIIDGNQGSPFTVDPTRGEV 3397
>gi|297712664|ref|XP_002832862.1| PREDICTED: protocadherin Fat 1-like, partial [Pongo abelii]
Length = 107
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 29 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 88
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 89 ITSGNPQGFFSIHPKTG 105
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 52
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I
Sbjct: 50 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSI 100
>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
domestica]
Length = 4550
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++ ++A D D D I Y I G+ F ID +
Sbjct: 1051 VMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEEKGVIETAEKLDRETVSHYWLTVFAT 1110
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P + +YI++++VNDN P T +PVYY +++EN + +VQ+ A D D
Sbjct: 1111 DQGVVPLSSFTEIYIEIEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSSD 1170
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+++YKI++GNP+ +F I +G
Sbjct: 1171 KLTYKITSGNPQGFFAIHPKTG 1192
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D +++YKI++GNP+ +F I + L
Sbjct: 1137 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSSDKLTYKITSGNPQGFFAIHPKTGLITT 1196
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI---- 92
P V +++ + NDN P L Y ++
Sbjct: 1197 TSRKLDREQQDEHILEVTVTDNGNPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERD 1256
Query: 93 ---VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + PI ++ A+D D P+ ISY I G+ F I+ +G
Sbjct: 1257 KPERERGAKREPIYRVIATDKDEGPNAEISYSIEDGDEHGKFFIEPKTG 1305
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG----------------- 60
+V + A+D D P++ ISY + + +P+ YF+ID S L
Sbjct: 2264 VVHVWATDTDSAPNRGISYHLFGNHSKSPDQYFHIDSSSGLISLVRTLDYEETQRHELLV 2323
Query: 61 -------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P IV + V ++NDN P+ P+Y A+I E + + A D D
Sbjct: 2324 RAVDSGMPPLSSDAIVTVHVTDLNDNPPLFDQPLYEAKISEQAPHGHFVTCVKAYDADSS 2383
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN + F ID +G
Sbjct: 2384 DTDKLEYSILSGNEQKNFAIDSKTG 2408
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT-------------------- 59
I+Q++A D D+ + I+Y +S E + N D G T
Sbjct: 3005 IMQVSAIDADIRSNAEITYTLSGPGAEKFKINADTGELKTLAPLDREQQAVYNLLVQATD 3064
Query: 60 GGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + V +++VNDN P + DP Y + EN P+ ++ A+D D + +I
Sbjct: 3065 GGGRFCQMSVLFTLEDVNDNAPEFSADP-YAITVFENTEPKTPLTRVQATDADAGLNHKI 3123
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY + + + F+ID SG
Sbjct: 3124 SYSL-VNSADGQFSIDESSG 3142
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAA----------SDGDLDPDQRISYKISAG------------ 44
Y A+I EN P+V + A S D DP + + + G
Sbjct: 2149 YSAEIPENIQLHSPVVHVQANSPEGLKVFYSIMDGDPFNQFTIHFNTGVINVIAPLDFES 2208
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+P +I LTG +V+ V I V++VNDN P+ Y + E +V
Sbjct: 2209 HPAYKLSIRATDSLTGVHAEVF--VDIIVEDVNDNPPVFTQQSYVTTLSEATVMGTSVVH 2266
Query: 105 LAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
+ A+D D P++ ISY + + +P+ YF+ID SG
Sbjct: 2267 VWATDTDSAPNRGISYHLFGNHSKSPDQYFHIDSSSG 2303
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I+ + A+D D + ++ Y IS GN +S F ID+ + +
Sbjct: 737 IILVNATDLDSGFNSKLVYAISGGNDDSCFMIDLETGMLKVLSPLDREATEKYTLNITVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ I+V + NDN P L Y+ ++ E++ I+Q+ A D DL P+
Sbjct: 797 DLGIPQKASWRLLDIRVLDANDNKPEFLQESYFIEVSEDREPYSEIIQVEAVDKDLGPNG 856
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+ Y + + F+ID +G
Sbjct: 857 EVKYYLLTDTDK--FSIDSETG 876
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+ DP Y + EN P+ ++ A+D D + +ISY + + + F+ID S +
Sbjct: 3088 FSADP-YAITVFENTEPKTPLTRVQATDADAGLNHKISYSL-VNSADGQFSIDESSGIIR 3145
Query: 59 ---------------------TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P ++ V + V ++NDN P+ Y A + E+
Sbjct: 3146 LEKPLDRELQAVYNLILKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVPED 3205
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+ D++ + I+Y I +GN F+ID +G++
Sbjct: 3206 VLVGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDATTGAI 3250
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------YLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + D + YL V
Sbjct: 3212 VLQVYAASRDIEANAEITYAIISGNEHGKFSIDATTGAIFIIDHLDYESSHDYYLTVEAT 3271
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ +Y A I E+ IV + A D D +
Sbjct: 3272 DGGTPSLSDVATVNVNVTDINDNTPVFSQDMYTAVISEDAILEQSIVTVMADDADGPSNS 3331
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN + F ID G +
Sbjct: 3332 HIHYSIIDGNQGNPFTIDPVRGEI 3355
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL-----PIVQLAASDGDLDPDQRISY 120
V++ +Q+ NDN P+ L Y I E+ S +L P+V + A+D D + + + Y
Sbjct: 1713 VWVHLQDENDNAPVFLQARYTGLISESAPISSVVLTDKNVPLV-IRAADADKESNALLVY 1771
Query: 121 KISAGNPESYFNIDIGSGSL 140
+I + YF ID +G++
Sbjct: 1772 QIVESSAHKYFAIDSSTGAI 1791
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 17 GILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID---------------------- 53
G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2898 GVIAI--LSTTDADTEEINRQVTYYITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDSY 2955
Query: 54 -IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ T G IV ++V + NDN P+ Y I E+ I+Q++A D D+
Sbjct: 2956 LLTITATDGAFSSKAIVEVKVLDANDNSPICEKSAYSDTIPEDTVPGKLIMQVSAIDADI 3015
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+Y +S E F I+ +G L
Sbjct: 3016 RSNAEITYTLSGPGAEK-FKINADTGEL 3042
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 50 FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
+N + +L GG DQV+ I+V + ND++P+T +PVY+ + EN P+ ++ A D
Sbjct: 2176 YNTSLRVELAGG-DQVF----IEVLDENDHIPLTAEPVYWVHVAENSPPKTPVARITAID 2230
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
GD + R++Y++ AGNP+S F+ID +G++
Sbjct: 2231 GDR--NSRLTYQLKAGNPQSLFDIDPNTGNI 2259
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+T +PVY+ + EN P+ ++ A DGD + R++Y++ AGNP+S F+ID
Sbjct: 2203 LTAEPVYWVHVAENSPPKTPVARITAIDGDR--NSRLTYQLKAGNPQSLFDID 2253
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP 62
P+Y +++EN ++QL A+D D D I+Y I + F ID G T P
Sbjct: 3673 PLYDVEVMENLPAGTLVIQLNATDLDRDDFGHITYSILSTFATETFRIDEETGDIFTRRP 3732
Query: 63 -----DQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+VY I + ++V + NDN P L Y A I N S P
Sbjct: 3733 LDRESRRVYEIPVSAFDAGGKSGHTTLRVKVGDANDNRPKFLLAEYRANIHANYSVGQPF 3792
Query: 103 VQLAASDGDLDPDQRISYKISAGN---PESYFNIDIGSGSL 140
+++ A D D+D + +ISY I N F+I+ +G L
Sbjct: 3793 LKVQAIDLDVDNNAKISYSIYESNGTRASDTFDINPSTGEL 3833
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
++ E+ S P+++L A D D + + Y IS G+ +S F ID S L
Sbjct: 1605 RVNESVSSGTPLIRLRARDRDHGYNGLLVYVISGGDDDSAFQIDTESGLLRVAGQLDREK 1664
Query: 60 -------------GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + I+ + V +VNDN P PV I E + QL
Sbjct: 1665 RAGYSLNVTVFDLGQPQKSAWRILPVIVTDVNDNPPRFDRPVISVSIAETAQIGTSVAQL 1724
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+A+D D + +I++ + AG S +D +G L
Sbjct: 1725 SANDADEGDNAKITFAL-AGGESSDLKLDPNTGLL 1758
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++I+V++VNDN P Y + E+ + + A+D D+ R+ Y ++ GN +
Sbjct: 3554 IWIRVEDVNDNPPQFEQRSYRCVLSEDGKRGQFVTMVTATDPDVSDQTRLVYSLTGGNDQ 3613
Query: 129 SYFNIDIGSGSL 140
FNID G++
Sbjct: 3614 QMFNIDSKRGTV 3625
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
+ + A+D D+ R+ Y ++ GN + FNID +G+ G YL+
Sbjct: 3587 VTMVTATDPDVSDQTRLVYSLTGGNDQQMFNIDSKRGTVTLGNLHRFGEQPNYLLNISVS 3646
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ + + + N + P P+Y +++EN ++QL A+D D D I+
Sbjct: 3647 DGVFTSFASLQVDLLSTNRHSPSFSRPLYDVEVMENLPAGTLVIQLNATDLDRDDFGHIT 3706
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I + F ID +G +
Sbjct: 3707 YSILSTFATETFRIDEETGDI 3727
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
+Y A + E+ + I+ + A+ D+ + I Y I GN +F ID S
Sbjct: 4439 LYAASVAESSAIGAEILNVLATSLDIGVNAEIKYSIVGGNEHRHFAIDPLSGVISLAEPL 4498
Query: 58 --------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L GG P + V I V + NDN P+ Y A I E+
Sbjct: 4499 DYERAREFYLTVQALDGGVPPLSNHAAVNITVLDSNDNPPIFTQASYSAAIREDAIIGET 4558
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++L A D D + RI+Y + G+ + F ID +G L
Sbjct: 4559 VLRLNAVDLDGGDNGRITYTLLNGDRHAQFRIDSSTGLL 4597
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P +++ V + ND+ P+ Y +IVE P+++L SD D + ++
Sbjct: 1206 PRNSTATLHVTVSDWNDHAPVFDREHYEVRIVETAPVGTPLIRLRVSDQDQGRNAQVQLS 1265
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN +F I+ SG L
Sbjct: 1266 IVGGNQGGHFRINPTSGVL 1284
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+T G + +Y + I V +VND+ P+ + Y A++ EN I+ L A+D D D+R
Sbjct: 2584 ITDGHNTIYTQLEITVLDVNDHAPVFSEQHYRAEVSENAEVGAEIITLNATDA--DQDKR 2641
Query: 118 ISY 120
+ Y
Sbjct: 2642 VFY 2644
>gi|326914512|ref|XP_003203569.1| PREDICTED: protocadherin Fat 3-like, partial [Meleagris gallopavo]
Length = 1203
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++Q+ A D D D I Y I G+ F+ID
Sbjct: 1053 VKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDRETT 1112
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+D P + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1113 KSYWLTVYATDHGVVPLYATIEVYIEVEDVNDNAPLTSEPIYYPSVMENSPKDVSVIQIQ 1172
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNID 134
A D D +++++Y+I++GNP+++F I+
Sbjct: 1173 AQDPDSSANEKLAYRITSGNPQNFFVIN 1200
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + R+ Y IS GN +S FNIDI +
Sbjct: 746 ILRIKAYDADSGFNGRVVYTISDGNADSRFNIDIETGVLKVLMPLDREKTDLYILNITIY 805
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V + NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 806 DLGNPQKSAWRLLTVTVGDANDNKPIFLQDSYSVNILESTSISTEIIQVEARDKDLGSNG 865
Query: 117 RISYKI 122
++Y +
Sbjct: 866 EVTYSV 871
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 38/53 (71%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+
Sbjct: 1148 LTSEPIYYPSVMENSPKDVSVIQIQAQDPDSSANEKLAYRITSGNPQNFFVIN 1200
>gi|198477246|ref|XP_002136689.1| GA23242 [Drosophila pseudoobscura pseudoobscura]
gi|198142988|gb|EDY71700.1| GA23242 [Drosophila pseudoobscura pseudoobscura]
Length = 1980
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIG------S 56
D VY +I EN ++ + A D D +D + +I+Y I+ G+ F+++ S
Sbjct: 1081 DFVYEGKIKENSPKGTFVLNITARDVDTIDLNSKITYSITGGDGLGIFSVNHQGSISSLS 1140
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYI+V+N NDN+P+T PVYY + E
Sbjct: 1141 QLDAETKNFYWLTLCAQDSAIVPLSNCVEVYIEVENENDNIPLTDKPVYYVNVTEGSPEN 1200
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D DP Q I+Y I +GN YF ID +G++
Sbjct: 1201 HDIITLNAVDPDRDPTQFITYNIVSGNLVGYFKIDSITGAI 1241
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 31/168 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T PVYY + E I+ L A D D DP Q I+Y I +GN YF ID +TG
Sbjct: 1183 LTDKPVYYVNVTEGSPENHDIITLNAVDPDRDPTQFITYNIVSGNLVGYFKID---SITG 1239
Query: 61 G----------PDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQI 92
+Q I + I V ++NDN P VY Q+
Sbjct: 1240 AIKTTERKLDRENQAEHILEVAISDNGSPMLSSTSRIVISVLDINDNSPEFDQRVYKVQV 1299
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ A D D + R++Y I +G ++ F ID G +
Sbjct: 1300 PSTTIVNESIFQVHAIDSDEGENGRVTYTIKSGKGKNKFRIDGSRGHI 1347
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI----------------- 52
++ EN + Q+ A D D D ++ + IS+GN + F+I
Sbjct: 1406 ELTENDKPGFLVTQILAVDDDND---QLWFNISSGNEANTFHIGQDNGNILLAKYLDYET 1462
Query: 53 ----DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
++ +T G Y + IQV + NDN P VY+ I EN I+QL A+
Sbjct: 1463 ETSYNLNISVTDGTFVTYTSIMIQVIDTNDNTPQFAKDVYHVNISENIEEESVIMQLHAT 1522
Query: 109 DGDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D D+++ Y + A +P S F ID SG++
Sbjct: 1523 DR--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1555
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +Y++V++VNDN P T +PVYY +++EN + +VQ+ A D D + R+ Y+
Sbjct: 1118 PLSSFIEIYVEVEDVNDNAPQTSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSNDRLMYR 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +++EN + +VQ+ A D D + R+ Y+I++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEVMENSPKDVSVVQIEAFDPDSSSNDRLMYRITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPVYRVIAGDKDEGPNAEISYSIEDGNELGKFFIEPKTG 1307
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A I EN P+V + A+ + ++SY I+ G+P S F ++ +
Sbjct: 2185 PFYSAGIPENIQVHSPVVHVQANSPE---GLKVSYSIADGDPFSQFTVNFNTGVVSVVAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++ND+ P+ Y A + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIVVEDINDSPPVFAQQSYAATLSEASVVG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ +S +F+ID SG
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNLSQSHDHFHIDSSSG 2340
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVRENQPVGSSVILMNSTDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVAVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ R++Y F+ID +G
Sbjct: 845 EATDKDLGPNGRVTYSFLTDT--DVFSIDSTTG 875
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAG------- 44
L Y+ ++ E++ I+Q+ A+D DL P+ R++Y + G
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGRVTYSFLTDTDVFSIDSTTGVVKIVQP 882
Query: 45 -----NPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQS 97
P Y I+ DL Q++ V ++V ++VNDN P + P Y ++ E+
Sbjct: 883 LDREVQPVHYLKIE-ARDLAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L ASD DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVVMWLEASDPDLGQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT----- 59
Y A + E +VQ+ A+D D +P++ ISY++ +S+ F+ID S L
Sbjct: 2288 YAATLSEASVVGTSVVQVRATDSDSEPNRGISYQMFGNLSQSHDHFHIDSSSGLISLLRT 2347
Query: 60 -----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P ++V + V ++NDN+P+ +Y A+I E+
Sbjct: 2348 LDYEQSRQHTILVRAVDGGMPPLSSDVVVTVDVTDLNDNLPLFEQQIYEARISEHAPHGH 2407
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D ++ Y I +GN + +F +D +G
Sbjct: 2408 FVTCVKAYDADSSDVDKLQYSILSGNDQKHFVVDSTTG 2445
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F++D IG+ + YL V
Sbjct: 3220 VLQVYAASRDIEANADITYSIISGNEHGKFSLDSKTGAVFIIGNLDYESSHEYYLTVEAT 3279
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y A I E+ ++ + A D D +
Sbjct: 3280 DGGTPSLSDVATVSINVTDINDNSPVFSQATYTAVISEDAVLEQSVITVMADDADGPLNS 3339
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3340 HIHYSIIDGNRGSSFTID 3357
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDP 86
G L ++R+ ++ + ++ + + T G +V + V IQV++ NDN P+
Sbjct: 2758 GRLKLEKRLDHETA-----KWYQFSVLARCTQGDYEVVSSVDVSIQVKDANDNSPVFESS 2812
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
Y A IVEN ++Q+ ASD D + ++ Y++
Sbjct: 2813 PYEAFIVENLPAGTRVIQIRASDADSGTNGQVMYRL 2848
>gi|195175116|ref|XP_002028306.1| GL11897 [Drosophila persimilis]
gi|194117478|gb|EDW39521.1| GL11897 [Drosophila persimilis]
Length = 1548
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIG------S 56
D VY +I EN ++ + A D D +D + +I+Y I+ G+ F+++ S
Sbjct: 713 DFVYEGKIKENSPKGTFVLNITARDVDTIDLNSKITYSITGGDGLGIFSVNHQGSISSLS 772
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYI+V+N NDN+P+T PVYY + E
Sbjct: 773 QLDAETKNFYWLTLCAQDSAIVPLSNCVEVYIEVENENDNIPLTDKPVYYVNVTEGSPEN 832
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D D DP Q I+Y I +GN YF ID +G++
Sbjct: 833 HDIITLNAVDPDRDPTQFITYNIVSGNLVGYFKIDSITGAI 873
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 31/168 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T PVYY + E I+ L A D D DP Q I+Y I +GN YF ID +TG
Sbjct: 815 LTDKPVYYVNVTEGSPENHDIITLNAVDPDRDPTQFITYNIVSGNLVGYFKID---SITG 871
Query: 61 G----------PDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQI 92
+Q I + I V ++NDN P VY Q+
Sbjct: 872 AIKTTERKLDRENQAEHILEVAISDNGSPMLSSTSRIVISVLDINDNSPEFDQRVYKVQV 931
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ A D D + R++Y I +G ++ F ID G +
Sbjct: 932 PSTTIVNESIFQVHAIDSDEGENGRVTYTIKSGKGKNKFRIDGSRGHI 979
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 26/136 (19%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI----------------- 52
++ EN + Q+ A D D D ++ + IS+GN + F+I
Sbjct: 1038 ELTENDKPGFLVTQILAVDDDND---QLWFNISSGNEANTFHIGQDNGNILLAKYLDYET 1094
Query: 53 ----DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
++ +T G Y + IQV + NDN P VY+ I EN I+QL A+
Sbjct: 1095 ETSYNLNISVTDGTFVTYTSIMIQVIDTNDNTPQFAKDVYHVNISENIEEESVIMQLHAT 1154
Query: 109 DGDLDPDQRISYKISA 124
D D D+++ Y + A
Sbjct: 1155 DR--DEDKKLFYHLHA 1168
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 24/137 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY+ I EN I+QL A+D D D+++ Y + A D S D +
Sbjct: 1133 VYHVNISENIEEESVIMQLHATDRD--EDKKLFYHLHATQ-------DPSSLALNSIDSI 1183
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQI----VENQSGILPIVQLAASDGDLDPDQRISYK 121
++++NDN P ++P Y+ ++ V Q LP A D D+ + YK
Sbjct: 1184 -------IKDLNDNPPSFVEPSYFIKLSVAAVRGQFVALP----RAYDKDICDTDLLEYK 1232
Query: 122 ISAGNPESYFNIDIGSG 138
I GN ++ID SG
Sbjct: 1233 IVNGNELQTYDIDKRSG 1249
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 3 LDPVYYAQI----VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-- 56
++P Y+ ++ V Q LP A D D+ + YKI GN ++ID S
Sbjct: 1195 VEPSYFIKLSVAAVRGQFVALP----RAYDKDICDTDLLEYKIVNGNELQTYDIDKRSGV 1250
Query: 57 -------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
++ G VY + I + N + P +Y AQI EN
Sbjct: 1251 ISLQNMLNFTDKSNTVLNISVSDGVHTVYARLKISLLPENMHSPQFEQSIYEAQIPENLL 1310
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A+D D P + Y+I + + YF +D +G
Sbjct: 1311 HGHNIITVKATDRDFGPYSNLYYEIDSEEMKKYFIMDRNTG 1351
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus impatiens]
Length = 4739
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 25/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSDLTGG- 61
D V A + ENQ + + A D D L D RI Y I G+ F+ID ++
Sbjct: 1096 DFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNEGNIKTKV 1155
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P L VY++V + NDN P+T PVYY ++EN
Sbjct: 1156 MLDVESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDRNDNTPLTEVPVYYPSVLENSPAG 1215
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++Q+ A D D+ P Q+ ++ I++GNPE YF I+ +G
Sbjct: 1216 VSVLQIQAFDRDVSP-QQFTFSITSGNPEGYFLINSTTG 1253
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++EN + ++Q+ A D D+ P Q+ ++ I++GNPE YF I+ + L
Sbjct: 1198 LTEVPVYYPSVLENSPAGVSVLQIQAFDRDVSP-QQFTFSITSGNPEGYFLINSTTGLIT 1256
Query: 59 TGG--------PDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G + V + V I V ++ND+ P Y QI +
Sbjct: 1257 TSGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPAS 1316
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
S P+ Q+ A+D D+ + +I Y I
Sbjct: 1317 PSTDKPLFQVLANDKDIGDNGKIQYSI 1343
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY++++ E + + ++ A+ D + + Y I GN F ID S + +Q+
Sbjct: 3280 VYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARSGVITIAEQL 3339
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V I V + NDN P+ + Y A I E+
Sbjct: 3340 DFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 3399
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 3400 VTQVFANDLDSEENGNVSYYIERGDRQKQFSIDEKTGQI 3438
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 29/156 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y+ I EN I+QL A+D D D+++ Y + A ++ I +TG
Sbjct: 1513 IYHVDISENVEKGEKILQLHATDED--EDKKVFYSLHAAQNQASLEIFHVDSVTGAVTLN 1570
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ Y V I V + ND+ P + + ++ E
Sbjct: 1571 EVLDRETIEEHVLTVMVKDQGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPI 1630
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F ID
Sbjct: 1631 GAAVVQVYAIDRDRGDNAKITYSITSGNVGNMFAID 1666
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y+ ++ G P ++ +N+ I +
Sbjct: 3191 VTKVHATDNDIGINRKIRYEFIDSADGHFLVAADSGIVTLGKPLDRETKAMYNVTIQAVD 3250
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + + + VQ++NDN P VY++++ E + + ++ A+ D +
Sbjct: 3251 QGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNAD 3310
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I GN F ID SG
Sbjct: 3311 VYYSIVGGNEHKKFQIDARSG 3331
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D +++Y I GN +
Sbjct: 2433 VWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDDKLTYTIVGGNEQ 2491
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 2492 QTYNIDQSTG 2501
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ A DGD +D D+R + I N ++++N+ I +
Sbjct: 1428 LVALVQAADKDGDSLWYDIVDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTIRVTDS 1487
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ L+V V ++ND+ P + +Y+ I EN I+QL A+D D D+++
Sbjct: 1488 VHTAETQLLV--TVIDINDHRPEFTENIYHVDISENVEKGEKILQLHATDE--DEDKKVF 1543
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D +G++
Sbjct: 1544 YSLHAAQNQASLEIFHVDSVTGAV 1567
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 2931 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDALPGTVVVK 2988
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+ S F I
Sbjct: 2989 LITMDKDSDVNTPIEFYITSGDSRSQFQI 3017
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL-------PIVQLAASDGDLDPD 115
+ + V + V + NDN P L Y +I E S G L P+V + A D D + +
Sbjct: 1799 EAHCNVIVHVLDRNDNAPRFLQATYNGEISEGASIGSLVLTNSSTPLV-IKAEDADSELN 1857
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++Y I P YF+ID +G++
Sbjct: 1858 ALLNYDIVEDLPRKYFHIDSSTGAI 1882
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISY 120
P ++IV I + ++NDN PM ++ YYA + V+ Q G + I ++ A D D + + Y
Sbjct: 2116 PRVAHVIVNITILDINDNCPMFVNLPYYAVVSVDAQKGDV-ITKVHAVDMDSGDNGEVRY 2174
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ G+ E F + +G +
Sbjct: 2175 ELKKGHGE-LFKVCRKTGEI 2193
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+ S F I ++
Sbjct: 2968 VDDRYEAAVNEDALPGTVVVKLITMDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVAK 3027
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +Q+ +VNDN P L Y + E +
Sbjct: 3028 ALDRETIDRYELEIVGTDGKYVFKTRVTVQILDVNDNPPYCLRYRYREILSEGSHPGTYV 3087
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 3088 LTVLATDYDDEPNAKLRFYLTGDNNDK-FSLDKETGVL 3124
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V +VNDN P T PVYY +++EN + ++Q+ A D D + +++YK
Sbjct: 1119 PLSSFVEIYIEVGDVNDNAPQTTQPVYYPEVMENSPKDVSVIQIEAFDADSTANDKLTYK 1178
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+++ +G
Sbjct: 1179 ITSGNPQGFFSMNPKTG 1195
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T PVYY +++EN + ++Q+ A D D + +++YKI++GNP+ +F+++ + L
Sbjct: 1140 TTQPVYYPEVMENSPKDVSVIQIEAFDADSTANDKLTYKITSGNPQGFFSMNPKTGLITT 1199
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1200 TSRKLDREQQSEHILEVTVTDNGIPPKSTLARVIVKILDENDNRPQFLQKFYQIKLPERE 1259
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ PI ++ A+D D P+ ISY I G+ F ID
Sbjct: 1260 KPERERTAKREPIYRVVAADKDEGPNAEISYSIEEGDEHGKFFID 1304
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LTGGPD 63
Y A + E+ + I+Q+ A+ D++ + I+Y I +GN F+ID + + GG D
Sbjct: 3234 YSATVSEDAVAGIEILQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIGGLD 3293
Query: 64 -----QVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL V I V ++NDN P+ Y A I E+ +
Sbjct: 3294 YESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAEVEQSV 3353
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
V + A+D D + I Y I GN E+ F ID
Sbjct: 3354 VTVMAADSDGPLNSHIRYSIIDGNQENQFTID 3385
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y A+I EN P+V + A+ + R+ Y I+ G+P S F I+ +
Sbjct: 2188 YSAEIPENIQIHSPVVHVQANSPE---GLRVFYSITDGDPFSQFTINFNTGVINTFAPLD 2244
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG +V+ V I ++++NDN P+ + Y A + E
Sbjct: 2245 FESHPAYKLSIRATDSLTGAHAEVF--VDIVIEDINDNPPLFTEQFYTATLSEAAVIGTS 2302
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+V++ A+D D ++ ISY + N S YF+ID +G
Sbjct: 2303 VVRVWATDADSGTNRGISYHLVENNSNSHEYFHIDSSTG 2341
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
I+ + V ++NDN P+ Y A + E+ + I+Q+ A+ D++ + I+Y I +GN
Sbjct: 3214 ILVVSVLDINDNPPVFEYREYSATVSEDAVAGIEILQVYAASRDIEANAEITYSIISGNE 3273
Query: 128 ESYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3274 HGKFSIDSKTGAI 3286
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG-------- 98
S++++ I G+++ G L+V++Q + NDN P + Y I E+ S
Sbjct: 1732 SFYSLTIQGTNMAGQSANTTLLVHLQ--DKNDNAPTFMQTEYTGHISESASANSVVLTDR 1789
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+P+V + A+D D D + + Y+I + YF ID +G++
Sbjct: 1790 HVPLV-IRATDADKDSNALLVYQIVEPSVHKYFTIDSSTGAI 1830
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ IQ+++VNDN P+ Y A IVEN ++Q+ A+D D + +++Y++
Sbjct: 2796 ISIQIRDVNDNKPVIESNPYKAFIVENMPAGTRVIQIKATDQDSGSNGQVTYRL 2849
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ V I V + ND+ P Y ++ E+ + ++Q+ A D D + I Y I +G
Sbjct: 1546 FARVIINVSDTNDHAPWFTSSSYKGRVFESAAVGSMVLQVTALDKDKGENAEIVYSIESG 1605
Query: 126 NPESYFNIDIGSGSL 140
N + FNI GS+
Sbjct: 1606 NTGNAFNIHPILGSI 1620
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----SAGNPESY-FNIDIG-----S 56
Y A IVEN ++Q+ A+D D + +++Y++ A ES+ N + G
Sbjct: 2815 YKAFIVENMPAGTRVIQIKATDQDSGSNGQVTYRLYPAQDADISESFAINAETGWITTLK 2874
Query: 57 DLTGGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVEN--Q 96
+L Y I V + V +VNDN P +Y + E+
Sbjct: 2875 ELDHEKQNKYKITVVASDRGEKVQLTSTAVVEVSVTDVNDNPPRFTAEIYKGTVSEDDPT 2934
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
G++ I+ +D + D ++++SY I+ G+P F ++
Sbjct: 2935 GGVVAILSTTDADSE-DVNRQVSYFITGGDPLGQFAVE 2971
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNID------- 53
D V A + ENQ + Q+ A D D P D RI Y I G+ F+ID
Sbjct: 1125 DFVISASVSENQPLNTLVTQVKAKDAD--PPGGDSRIGYSIRGGDGVGLFSIDDEGNIRT 1182
Query: 54 ---IGSDLTGG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P L VY++V + NDN P+T PVYY ++EN
Sbjct: 1183 KAVLDVEAKAGYWLTVYAQDHGVVPLSSKLQVYVEVLDENDNTPLTEQPVYYPSVLENSP 1242
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++Q+ A D D+ P Q+ S+ I++GN E YF I+ SG
Sbjct: 1243 AGVSVLQIRAFDRDVSP-QQFSFAITSGNAEGYFLINSTSG 1282
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y+A++ E + + ++ A+ D + + Y I GN F ID S + +Q+
Sbjct: 3324 YFARVPEIDAVGTEVARVLATSKDTGVNADVYYTIVGGNEHKKFEIDTKSGVVSIAEQLD 3383
Query: 66 -----------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ V I V + NDN PM Y A I E+ +
Sbjct: 3384 YERAKDYFLTIQAIDGGVPPLTNHATVNITVLDSNDNAPMFSQASYRASIREDAKAGEKV 3443
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VQ+ A+D D + + ++SY I G+ + F ID SG +
Sbjct: 3444 VQVFANDLDSNENGQVSYSIERGDRQKQFTIDSQSGQI 3481
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 26/145 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++EN + ++Q+ A D D+ P Q+ S+ I++GN E YF I+ S L
Sbjct: 1227 LTEQPVYYPSVLENSPAGVSVLQIRAFDRDVSP-QQFSFAITSGNAEGYFLINSTSGLIT 1285
Query: 59 TGG-----PDQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVEN 95
T G +Q I+ + V++ VND+ P+ + Y QI +
Sbjct: 1286 TSGRKLDRENQAEHILEVTVRDDGRPVLSSTTRVVVQVDDVNDHSPVFEEKFYMVQIPAS 1345
Query: 96 QSGILPIVQLAASDGDLDPDQRISY 120
S P+ Q+ A D D+ + +I Y
Sbjct: 1346 PSLDKPLFQVLAHDQDIGKNGKIQY 1370
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + E+ +V+L D D + + + + I +G+P S F I
Sbjct: 3015 YQATVKEDALPGTVVVELTTVDKDTELNTALDFYIISGDPRSQFAIRSTGQVYVAKALDR 3074
Query: 53 ---DIGSDLTGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D L G D ++ V +QV +VNDN P L Y + E ++ +
Sbjct: 3075 ETRDRYELLVVGTDGKFVFETRVIVQVLDVNDNPPYCLKYRYREVLSEGSHPGSYVLTVL 3134
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D +P+ ++ + ++ G E F++D +G L
Sbjct: 3135 ATDYDDEPNAKLRFYLTGGKNEK-FSLDKETGVL 3167
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 32/166 (19%)
Query: 4 DPVYYAQIVEN--QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
+ +Y+ +I EN + G I+QL A D LD D+++ Y + ++ I LTG
Sbjct: 1540 ESIYHVEISENVVEKG-EAILQLHAQD--LDEDKKLFYSLHNAQSQASLQIFHVDSLTGT 1596
Query: 62 ---------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+ + V + V + ND+ P + + ++ E
Sbjct: 1597 ITLNEALDRETIQEHILTVMVKDQGTPAKRNFARVLVTVHDHNDHAPTFISEIIQGKVFE 1656
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+VQ+ A D D + ++SY +++GN + F+ID G++
Sbjct: 1657 TSPIGTAVVQVIAIDRDRGENAQLSYSMTSGNVGNVFSIDPDLGTI 1702
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 48 SYFNIDIG-SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL----- 100
++N+ I + ++G Q +IV+ V + NDN P + VY Q+ E S G L
Sbjct: 1816 KFYNLSIAATSMSGASAQCNVIVH--VLDRNDNAPQFVQAVYTGQVSEAASIGSLVFSAN 1873
Query: 101 ----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P +F+ID +G++
Sbjct: 1874 STSSPLV-IKAEDADSELNALLNYDIVEELPRKFFHIDSSTGAI 1916
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 29/136 (21%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------- 53
L+PV ++ENQ + + A+D D I Y I++ + +F ID
Sbjct: 2589 LNPVVEVSVLENQLPGKLVTSVLATDKDFGEYGTIEYSINSDYLKEFFEIDRENGDIVTK 2648
Query: 54 ---------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN--- 95
+ SD GG ++IV ++V + NDN P+ L Y A I N
Sbjct: 2649 KSLDREKHKLFEIPVMASD--GGGKSGFVIVRVKVTDENDNSPVFLLKEYKASIYGNLTL 2706
Query: 96 QSGILPIVQLAASDGD 111
S L + L A +GD
Sbjct: 2707 NSAFLKVKALDADEGD 2722
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++ +N+ I + G P Q+ + + + VQ++NDN P Y+A++ E + + +
Sbjct: 3282 KAMYNVSIQAMDQGTP-QLSSVTFLIVNVQDINDNPPEFTSKYYFARVPEIDAVGTEVAR 3340
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+ D + + Y I GN F ID SG
Sbjct: 3341 VLATSKDTGVNADVYYTIVGGNEHKKFEIDTKSG 3374
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN--QSGILPIVQ 104
++++N+ I +T G ++ ++++V ++ND+ P + +Y+ +I EN + G I+Q
Sbjct: 1504 QNFYNLTIS--VTDGVNEARTSLFVKVIDINDHRPELSESIYHVEISENVVEKG-EAILQ 1560
Query: 105 LAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
L A DLD D+++ Y + ++ F++D +G++
Sbjct: 1561 LHAQ--DLDEDKKLFYSLHNAQSQASLQIFHVDSLTGTI 1597
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVYL----- 67
+ +LAA D DL + ++ Y ISAG+ +S F ID IG D+ +L
Sbjct: 815 LARLAARDRDLGYNGKLVYGISAGDSDSVFGIDPDTGELRLIGRLDREREDEYFLNITVY 874
Query: 68 -----------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ + V +VNDN P + ++ E I + +D DL +
Sbjct: 875 DLGKPQKSASRMLAVSVLDVNDNAPKFEKALASFRVSEAALNGTIIFRANTTDADLGENA 934
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+++Y + S F +D +G L
Sbjct: 935 QVAYSLVTDT--SDFRVDRTTGVL 956
>gi|345321313|ref|XP_001521839.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
anatinus]
Length = 1477
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
++ L+A D D+ D RI Y I G+ F ID +
Sbjct: 1143 VLTLSAQDEDVGRDGRIRYSIRDGSGLGVFRIDEEKGTIETAAQLDRETMTHYWLTVYAT 1202
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P + VYI+V++VNDN P+T VY+ + EN + +VQ+ ASD D
Sbjct: 1203 DQGATPLSSFTEVYIEVEDVNDNAPLTTQRVYHPAVPENSPKDVSVVQIEASDP--DAGD 1260
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++S++I++GNP+ +F I +G
Sbjct: 1261 QLSFRITSGNPQGFFAIHPKTG 1282
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T VY+ + EN + +VQ+ ASD D ++S++I++GNP+ +F I + L
Sbjct: 1228 LTTQRVYHPAVPENSPKDVSVVQIEASDP--DAGDQLSFRITSGNPQGFFAIHPKTGLIT 1285
Query: 59 ----------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+G P + V ++V + ND+ P L Y Q+ E
Sbjct: 1286 TTSRKLDREQQEEHVLEVMVADSGSPQLTSVARVIVKVLDENDHKPQFLQKFYTIQLPER 1345
Query: 96 QSGI--LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + +P+ ++ A+D D + ISY I AGN F I+ +G
Sbjct: 1346 ERSMRRVPVYRVIAADRDTGANAEISYSIEAGNEHGKFFIEPRTG 1390
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ QL ASD D D ++ Y +S GN +F +D+ S L
Sbjct: 826 VAQLNASDADCGYDGKVVYALSGGNDAGHFTVDVESGLLRVLSPLDREAQDEYTLNVTAF 885
Query: 59 -TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ IQ+ + NDN P Y + E +VQL A+D DL P+
Sbjct: 886 DLGIPQRAAWRLLGIQILDANDNRPEFHRDSYEVAVSEAAEPGGVLVQLEATDRDLGPNG 945
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y + + + F+ID G +
Sbjct: 946 EVRYGLLSDTDQ--FSIDATMGEV 967
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------- 49
Y A EN +V++ ASD D D +++Y ++ P +
Sbjct: 556 YRATFDENAPAGTSVVRVEASDLDTGEDGQVTYSLAQAVPGPFSVDPFTGEVRTTEALDY 615
Query: 50 ------FNIDIGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ I + + G P + + V + + N+NDN P+ A + +Q+ +P
Sbjct: 616 ELVPRIYTIRVRASDRGRPFRRETEVPVTLTLLNLNDNAPLFERVDCQAAVPRDQALGVP 675
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ L+A D D Q + Y++ AG+P F++D GSG L
Sbjct: 676 VATLSAIDAD--ELQLVRYRLDAGDPLGLFHLDPGSGVL 712
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----------------DQ 64
+VQL A+D DL P+ + Y + + + + +G GP DQ
Sbjct: 931 LVQLEATDRDLGPNGEVRYGLLSDTDQFSIDATMGEVRLAGPLDREARAVHVLRVAAWDQ 990
Query: 65 V--------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++ + V++VNDN P + P+ ++ E+ + L A D DL P
Sbjct: 991 AEEGQRLSSAAVLTVTVEDVNDNAPACIPPLQRVRVREDLPEGALVTWLEARDPDLGPAG 1050
Query: 117 RISYK-ISAGNPESYFNIDIGSGSL 140
++ + + AG +F +D SG+L
Sbjct: 1051 QVRFSLLEAG--AGFFELDRLSGAL 1073
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
+ ++ G ++ R+ ++ ++ + F D G P ++ +YI+V +VNDN
Sbjct: 1081 VFRIGEETGVIETSDRLDHESTSHYWLTVFATDQGV----VPLSSFMEIYIEVGDVNDNA 1136
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P T +PVYY +I+EN + +VQ+ A D D ++ YKI++GNP+ +F+I +G
Sbjct: 1137 PQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSDKLMYKITSGNPQGFFSIHPKTG 1194
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--- 58
T +PVYY +I+EN + +VQ+ A D D ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSSDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 59 ---------------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+G P + + V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDSGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRDRNAKREPLYRVIATDKDDGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2182 PFYSAEIAENIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2238
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 2239 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVEDINDNPPVFAQQSYAATLSEASVIG 2296
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY + +S +F++D +G
Sbjct: 2297 TSVVQVRATDSDSEPNRGISYHMFGNLSKSHDHFHVDSNTG 2337
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY + +S+ F++D + L
Sbjct: 2299 VVQVRATDSDSEPNRGISYHMFGNLSKSHDHFHVDSNTGLISLLRTLDYEQSRQHTIFVR 2358
Query: 60 ---GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG P +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2359 AVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2418
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2419 ADKLQYSILSGNDHKHFVIDSATG 2442
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------------SAGNP 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I P
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVKIARP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
E Y I+ P Q++ +I+ + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEP-QLFSTVILKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3246 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3305
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
I V ++NDN P+ Y A I E+ ++ + A D D +
Sbjct: 3306 DGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMADDADGPSNS 3365
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3366 HIHYSIIDGNQGSSFTID 3383
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2792 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSL 2845
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3213 VVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3272
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3273 GKFSIDSKTGAV 3284
>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
Length = 4674
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D V+ I EN+ ++ + A D D +D + +I+Y I+ G+ F++ D GS
Sbjct: 1085 DFVFQGIIKENRPKGTFVLNVTARDMDEIDMNAKITYSITGGDGLGIFSVNDKGSIHSLS 1144
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYI+VQN NDN+P+T PVYY + E
Sbjct: 1145 QLDAETKSFYWLTLCAQDNAIVPLSNCVEVYIEVQNENDNIPLTSKPVYYVNVTEGSPEN 1204
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I++L A D D D Q I+Y I +GN YF I+ +G L
Sbjct: 1205 IEIIKLTAIDPDRDDTQSITYNIISGNLVGYFEINSVTGVL 1245
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I++L A D D D Q I+Y I +GN YF I+ +
Sbjct: 1187 LTSKPVYYVNVTEGSPENIEIIKLTAIDPDRDDTQSITYNIISGNLVGYFEINSVTGVLK 1246
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P Y Q+
Sbjct: 1247 TTARKLDRENQAEHILEVAISDNGSPVLASTTRIVVNVLDINDNSPEFDQRAYKIQVPST 1306
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID SG +
Sbjct: 1307 ATANESIFQVHAIDIDDGENGRITYSIKSGKGKNKFRIDNASGHI 1351
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN ++Q+ A D D D ++ Y IS GN E+ F I
Sbjct: 1411 LTENDKPGFLVMQILAIDDDND---QLWYNISGGNEENTFYIGRDNGNILLSKPLDYEKQ 1467
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + +Y ++IQV + NDN P +Y+ I EN I+QL A+D
Sbjct: 1468 TSYNLTISVTDGSNIIYTNLFIQVIDTNDNTPQFTKDIYHVNISENIEEESIIMQLHATD 1527
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1528 K--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1559
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 35/160 (21%)
Query: 15 QSGILPIVQLAASDGDL-----------DPD---QRISYKISAGNPESYFNIDIGSDL-- 58
Q LPI ++ S+ L DPD Q ++Y I AG+ +S F I +L
Sbjct: 2958 QQFKLPINKITVSENALPGTVLDNFLLIDPDIEKQEMNYYIIAGDNQSQFQIGKTGELFI 3017
Query: 59 ------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
T G V IQV+++NDN+P L P Y+ + E+
Sbjct: 3018 TKQLDRENISFYNLSLLATDGKFIAEANVEIQVKDINDNLPYCLKPRYHINVNESIPAGT 3077
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D D ++ Y IS G F ID GSL
Sbjct: 3078 VLTDVKAIDFDSSDDFKLRYFIS-GKGSDDFTIDKDKGSL 3116
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKIS 123
Y V I V++ NDN P Y A + EN ++ IV++ A+D D P D R ++
Sbjct: 2836 YADVVIHVRDENDNYPQFDSSFYSASVAENTDKVVSIVKITATDADSGPNGDVRYYFEND 2895
Query: 124 AGNPESYFNIDIGSG 138
+ + + F+IDI +G
Sbjct: 2896 SESVSNIFDIDIYTG 2910
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+++ + +VNDN P+ ++ YYA + +++Q G + I+ + A D D + + Y++ GN
Sbjct: 2117 IHVSILDVNDNCPIFVNLPYYATVSIDDQKGTV-IMHVKAIDLDTGENGEVRYELKKGNG 2175
Query: 128 ESYFNIDIGSGSLG 141
E F +D SG L
Sbjct: 2176 E-LFKLDRKSGELS 2188
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 39 YKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQ 96
Y +S N E N DI T +Y+ V++ V +VND P +Y + EN
Sbjct: 2288 YVVSELNYEEQTNHDITIRATDSFSGIYVEVFLSVTVIDVNDCYPEIESDIYNITLPENT 2347
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
I+++ A+D D + ++SY I + N E+ F IDI G L
Sbjct: 2348 PFASQILKINATDADTGANAKLSYFIESINSENDSEIFYIDINEGHL 2394
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY----------------------FNIDIGSDL 58
I ++ A+D D ++++ Y + N + + FN+ + ++
Sbjct: 3183 ITKVHATDKDFGVNRKVRYSLMGQNYDHFEISKSSGIIRLEKNLDRETIPMFNLTVKAED 3242
Query: 59 TGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P ++Y + I + ++NDN P Y Q+ EN + + + + A+ D+ +
Sbjct: 3243 HGVP-RLYSTANLLINILDINDNPPEFSLRQYLCQVHENATIGVEVCTVYATSKDIGVNA 3301
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I GN + F+ID +G+L
Sbjct: 3302 DILYYIMGGNEQRKFSIDSKTGAL 3325
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIG------- 55
+Y + EN I+++ A+D D + ++SY I + N E+ F IDI
Sbjct: 2338 IYNITLPENTPFASQILKINATDADTGANAKLSYFIESINSENDSEIFYIDINEGHLYLK 2397
Query: 56 -----------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQS 97
D P ++I V+++NDN P ++P ++ ++ V +
Sbjct: 2398 KPLDYELKKFHHIVVHVKDHGSPPLSSRCNIFITVKDLNDNAPRFIEPSFFTKLSVAAKR 2457
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
G + A D D+ + YKI GN +NI+ SG
Sbjct: 2458 GQF-VALPKAYDNDICDANNLEYKIIYGNDLQTYNINKYSG 2497
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y Q+ EN + + + + A+ D+ + I Y I GN + F+ID + L
Sbjct: 3273 YLCQVHENATIGVEVCTVYATSKDIGVNADILYYIMGGNEQRKFSIDSKTGALTLNESLD 3332
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I V +VNDN P + +Y ++E+ + I
Sbjct: 3333 YEMSKYYYLTIQAIDRGTPPLSNIAHVNISVLDVNDNSPKFVQDIYRVNVLEDIALGKQI 3392
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + ++ Y I+ G+ F+ID +G++
Sbjct: 3393 ATVKAIDDDAGLNAKLHYNINGGDNFGQFSIDEINGTI 3430
>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4611
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD---QRISYKISAGNPESYFNIDIGSD 57
+T +P+Y + EN + ++Q+ A D D P +SY+I +GNP+ +FN+D S
Sbjct: 1163 LTSEPLYRPSVPENSPPDVSVIQIQAQDPDTSPSTSLHWLSYQIVSGNPQHFFNMDPHSG 1222
Query: 58 LT-----------------------GGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
L GGP+ Q ++V +QV + NDN P + VY ++
Sbjct: 1223 LITTTSHKLDRELQTEHVLEVVISDGGPNPRQSTVLVIVQVLDENDNKPTFHEKVYKVKL 1282
Query: 93 --VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E + PI ++ A D D P+ ISY I GN + F ID +G++
Sbjct: 1283 PERERRKKAEPIYRVFAYDLDEGPNSDISYSIVDGNEDGKFVIDPKTGTV 1332
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 27/155 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ EN ++Q++A+D D D I Y I G+ F+ID
Sbjct: 1068 VKENARIGTTLLQVSANDDDTGRDGEIHYSIRDGSGLGRFSIDEETGVIYTTDILDRETK 1127
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
SD P + V++QV+++NDN P+T +P+Y + EN + ++Q+
Sbjct: 1128 DSYWLTVYASDRGVVPQFTTIDVFVQVEDINDNAPLTSEPLYRPSVPENSPPDVSVIQIQ 1187
Query: 107 ASDGDLDPD---QRISYKISAGNPESYFNIDIGSG 138
A D D P +SY+I +GNP+ +FN+D SG
Sbjct: 1188 AQDPDTSPSTSLHWLSYQIVSGNPQHFFNMDPHSG 1222
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V+++ND+VP+ P+Y + E+ + +VQ+ A D D + + Y I AGN
Sbjct: 1571 VLIEVEDINDHVPIFTSPLYEGSVYESAAKGSAVVQVTALDKDKGKNAELRYSIEAGNTG 1630
Query: 129 SYFNID 134
+ F I+
Sbjct: 1631 NTFRIE 1636
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 25/127 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
++++ A DGD + ++ + S GN ++ FNID+ + L
Sbjct: 760 VIKVNAYDGDTGFNGQVLFSFSGGNTDNCFNIDMQTGLISVFLPMDREKRDHYLLNITIY 819
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTL-DPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P ++ + ++ I +++ NDN P L + Y I EN + I+Q+ A+D D+ P+
Sbjct: 820 DLGIPQKMAWRLLSIHIEDANDNAPQFLQEDGYKITIPENMAIGTDIIQVEATDKDMGPN 879
Query: 116 QRISYKI 122
+ Y I
Sbjct: 880 GEVMYSI 886
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V L V+IQ ++NDN P+ Y + E P++Q+ ASD D + +
Sbjct: 2283 LTGAHAEVDLGVFIQ--DINDNPPIFQKMSYSVSLSETAMIGTPVLQVIASDQDSEKNNI 2340
Query: 118 ISYKISA--GNPESYFNIDIGSG 138
I Y+I + N YF+ID SG
Sbjct: 2341 IRYQIFSQLHNSTDYFHIDSSSG 2363
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-----------------LT---- 59
++++ A+ D+ + I+Y I +GN F++ S LT
Sbjct: 3283 VLRVYAASKDIGTNAEITYTIRSGNEHRRFHVHPHSGAIIVAQPLDYETCRDYFLTVEAR 3342
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V I + +VNDN PM +Y A + E+ +VQL A D D +
Sbjct: 3343 DGGTPPLSAVTTVNINLTDVNDNAPMFSRDLYTAFVSEDAFIGEFVVQLVAEDSDSHLNG 3402
Query: 117 RISYKISAGNPESYFNID 134
+ Y + +G+ S F ID
Sbjct: 3403 AVLYSVVSGDQGSQFFID 3420
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
I + ASD D ++ Y I +GN +F ++ + S D Y +
Sbjct: 2432 ITCVQASDADSSDFDKLEYSILSGNERMHFVLEKSTGILALSSHRKQKMDPTYSLNVSVS 2491
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
V+I+V N + P+ VY A++ EN + ++Q+ A+D D +P I+
Sbjct: 2492 DGVFTSTAQVHIKVLGANLHSPVFERSVYEAELRENAAVGTTVIQVKATDKDQEPFGHIT 2551
Query: 120 YKISAGNPESYFNID 134
Y + F+ID
Sbjct: 2552 YSFANDVGSDQFSID 2566
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE---------NQS 97
ESY I ++ G L+ IQ+ + NDN P+ L YY I E N
Sbjct: 1754 ESYTLIVQAVNMAGMASNATLL--IQILDENDNPPVFLQHHYYGSISEVAPVKSVVLNLH 1811
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
G LP+V + A+D D + + + Y+I + F +D G+GS+
Sbjct: 1812 G-LPLV-IRATDPDHNQNALLVYEIVENTAKKVFTVDSGTGSI 1852
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG------------------ 44
P Y A + EN + ++ A D D P + + Y + SAG
Sbjct: 3162 PQYTANVYENTIPKALLTRIQAIDPDEGPGRMVVYSLTDSAGGLFSIDHVSGVVILEHTL 3221
Query: 45 --NPESYFNIDIGSDLTGGPDQVYLIV--YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+S + I + + G P +Y +V I V ++NDN P+ + E+
Sbjct: 3222 DREVQSTYQITVCASDQGSPLPLYSLVNVTITVLDINDNHPIFEHRDQLTTVPEDVRVGT 3281
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A+ D+ + I+Y I +GN F++ SG++
Sbjct: 3282 EVLRVYAASKDIGTNAEITYTIRSGNEHRRFHVHPHSGAI 3321
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 25/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSDLTGG- 61
D V A + ENQ + + A D D L D RI Y I G+ F+ID ++
Sbjct: 1097 DFVVSASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDDEGNIKTKA 1156
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P L VY++V + NDN P+T PVYY + EN
Sbjct: 1157 ALDVESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDENDNTPLTEVPVYYPSVPENSPAG 1216
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++Q+ A D D+ P Q+ ++ I++GNPE YF I+ +G
Sbjct: 1217 VSVLQIRAFDRDVSP-QQFTFSITSGNPEGYFLINSTTG 1254
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY + EN + ++Q+ A D D+ P Q+ ++ I++GNPE YF I+ + L
Sbjct: 1199 LTEVPVYYPSVPENSPAGVSVLQIRAFDRDVSP-QQFTFSITSGNPEGYFLINSTTGLIT 1257
Query: 59 TGG--------PDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G + V + V I V ++ND+ P Y QI +
Sbjct: 1258 TSGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPAS 1317
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
S P+ Q+ A+D D+ + +I Y I
Sbjct: 1318 PSTDKPLFQVLANDKDIGDNGKIQYSI 1344
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY++++ E + + ++ A+ D + + Y I GN F ID S + +Q+
Sbjct: 3280 VYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARSGVITIAEQL 3339
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V I V + NDN P+ + Y A + E+
Sbjct: 3340 DYERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASVREDAKIGEK 3399
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 3400 VTQVFANDLDSEENGNVSYYIERGDRQKQFSIDQKTGQI 3438
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 47 ESYFNIDIG-SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL---- 100
++N+ + +++ G Q +IV+ V + NDN P L Y +I E S G L
Sbjct: 1784 RKFYNLTVAATNMAGAKAQCNVIVH--VLDRNDNAPKFLQATYTGEISEGASIGSLVLTN 1841
Query: 101 ---PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P YF+ID +G++
Sbjct: 1842 TSSPLV-IKAEDADSELNALLNYDIVEDLPRKYFHIDSSTGAI 1883
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-- 61
+ Y I EN I+QL A+D D D+++ Y + A ++ I +TG
Sbjct: 1512 EHTYRVDISENVEKGEVILQLHATDED--EDKKVFYSLHAAQNQASLEIFHVDSVTGAVT 1569
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ Y V + V + ND+ P + + ++ E
Sbjct: 1570 LNEVLDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVFETS 1629
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F+ID
Sbjct: 1630 PVGAAVVQVWAIDRDRGDNAKITYSITSGNVGNMFSID 1667
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D++++Y I GN +
Sbjct: 2434 VWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDEKLTYTIVGGNEQ 2492
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 2493 QTYNIDQSTG 2502
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ VQ++NDN P VY++++ E + + ++ A+ D + + Y I GN
Sbjct: 3264 VNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKK 3323
Query: 131 FNIDIGSG 138
F ID SG
Sbjct: 3324 FQIDARSG 3331
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 2931 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDALPGTVVVK 2988
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+ S F I
Sbjct: 2989 LITVDKDSDVNTPIEFYITSGDSRSQFQI 3017
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+ S F I ++
Sbjct: 2968 VDDRYEAAVNEDALPGTVVVKLITVDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVAK 3027
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +QV +VNDN P L Y + E +
Sbjct: 3028 ALDRETVDRYELEIVGTDGKYVFKTRVTVQVLDVNDNPPYCLRYRYREILSEGSHPGTYV 3087
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 3088 LTVLATDYDDEPNAKLRFYLTGDNNDK-FSLDKETGVL 3124
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ ++Q DGD LD D+R + I N ++++N+ IG +T
Sbjct: 1429 LVALMQATDKDGDSLWYDILDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTIG--VT 1486
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ + V ++ND+ P + Y I EN I+QL A+D D D+++
Sbjct: 1487 DSVHTAVTQLLVTVIDINDHRPEFTEHTYRVDISENVEKGEVILQLHATDE--DEDKKVF 1544
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D +G++
Sbjct: 1545 YSLHAAQNQASLEIFHVDSVTGAV 1568
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A ++E+ + +V L ASD DL D + Y I G+ F ID
Sbjct: 1163 VYEAAVIEDAAVGSSVVTLTASDKDLGRDGVVRYHIHDGSGLGVFTIDEESGVIRTSELL 1222
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+DL P + V+++V +VNDN P P+Y+A + EN +
Sbjct: 1223 DRETVPHYWLSVFATDLGTEPLVSWTHVFLEVLDVNDNAPQLSQPIYFASVQENVEKVNS 1282
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++QL+A+D D+ + ++S+++ + YF+ID +G
Sbjct: 1283 VIQLSATDVDVSSEGKLSFQMLESH-RVYFDIDPKTG 1318
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 28/160 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P+Y+A + EN + ++QL+A+D D+ + ++S+++ + YF+ID
Sbjct: 1267 PIYFASVQENVEKVNSVIQLSATDVDVSSEGKLSFQMLESH-RVYFDIDPKTGVISTLAA 1325
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN--QSG 98
+ SD + V I+V + NDN P D +++ Q++E QSG
Sbjct: 1326 LDREEKPEHSIEVVVSDNAAPALRSTATVVIKVLDSNDNRPKFTDKLFHVQLLERRWQSG 1385
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ ASD D + ++YK+ N + F ID +G
Sbjct: 1386 KRDVCRVVASDEDEGSNAVVTYKLQ-DNSDERFQIDPLTG 1424
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---ESYFNIDIGS--- 56
L P+Y I E+ S I+Q++A D LD + ++ + I + P F++D S
Sbjct: 1574 LKPLYEVSIPEDTSPWKDILQISAQD--LDSNSKLVFSIHSAVPPDSTGLFHLDPKSGVL 1631
Query: 57 --------DLTGGPDQVYLI-------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ T V ++ V I V++ ND+ P L P Y A I
Sbjct: 1632 VMTEPLDFERTAVHTLVVMVRDQEIPMKRNFAKVVIHVEDCNDHSPAFLSPRYEASISNQ 1691
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D + ISY + +GN ++ F+ID SGS+
Sbjct: 1692 APTGSEVIRVKALDKDTGSNADISYSLHSGNTDNIFSIDAESGSI 1736
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI---------- 52
+ VY +VEN + PIV + D D+ R ++ I+ G+P F I
Sbjct: 3036 EEVYRGSVVENITPFEPIVSMTTFDADVALQNRLVTCYITDGDPLGQFAIIQEDENQWGL 3095
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ T G + + V I V ++NDN P +Y ++EN S
Sbjct: 3096 IVKESLDRETKDRFTLRVTATDGKFEAAVTVEIHVLDLNDNSPTCEQLLYTETVMENSSP 3155
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++ASD D+ + ISY + + + F++D +G L
Sbjct: 3156 RRFLLKVSASDPDVGANGEISYTLHGPDADK-FHLDHRTGEL 3196
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I + +VNDN P + + A++ E + +V++ ASD D + + YKI GN
Sbjct: 2488 FVTINITDVNDNPPDFISSEFKAKVDETANCGHLVVKIQASDPDSADTKNLKYKILTGNR 2547
Query: 128 ESYFNIDIGSG 138
+ YFNI+ SG
Sbjct: 2548 DRYFNINESSG 2558
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---------------- 49
+Y ++EN S +++++ASD D+ + ISY + + + +
Sbjct: 3144 LYTETVMENSSPRRFLLKVSASDPDVGANGEISYTLHGPDADKFHLDHRTGELLTLAVLD 3203
Query: 50 ------FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
FN+ + GG + + VQ++NDN P+ Y + +N + P+
Sbjct: 3204 RESDGEFNL-VAKATDGGGRSCQADIQLMVQDMNDNQPLFSASHYMVTVFDNTTVRTPVA 3262
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + + Y + AG+ YF++D SG L
Sbjct: 3263 VIYAKDPDAGINSEVRYSLIAGDA-GYFSLDEFSGVL 3298
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 24/134 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------------- 56
+VEN I+Q A+DGD + ++ + +S+GN + F ID S
Sbjct: 851 VVENHPLNSTILQFKAADGDSGFNGQVVFALSSGNEDGCFCIDTFSGELRLVCSLDRESK 910
Query: 57 ----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
DL V+ ++ + + +VNDN PM P Y ++ EN + +
Sbjct: 911 EFYILNITAYDLGMPQRSVWKLMAVNILDVNDNPPMFDQPRYVIRVPENTAVGSVVFTAQ 970
Query: 107 ASDGDLDPDQRISY 120
A+D D D ++ Y
Sbjct: 971 AADMDTDMSGKVQY 984
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 21/137 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ A++ E + +V++ ASD D + + YKI GN + YFNI+ S
Sbjct: 2508 FKAKVDETANCGHLVVKIQASDPDSADTKNLKYKILTGNRDRYFNINESSGVISFSNVCK 2567
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ G Q V I + N N P VY A++ EN +++L
Sbjct: 2568 RNLDPFYNLTVAVSDGVFQKTAPVTIDMINSNRYSPYFKQSVYEAELAENAQAGTRVIRL 2627
Query: 106 AASDGDLDPDQRISYKI 122
AA D D P + Y I
Sbjct: 2628 AAIDPDEGPYGSVDYTI 2644
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 67 LIVYIQVQNVNDNV--PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
V IQV +VN+N+ P + VY A ++E+ + +V L ASD DL D + Y I
Sbjct: 1141 CFVEIQVLDVNENLYRPTFSEFVYEAAVIEDAAVGSSVVTLTASDKDLGRDGVVRYHIHD 1200
Query: 125 GNPESYFNIDIGSG 138
G+ F ID SG
Sbjct: 1201 GSGLGVFTIDEESG 1214
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I+ K+ A + +N+ + +T G YI+V ++N++ P+ L P+Y I E+
Sbjct: 1530 IARKLDAAR-HAIYNLTV--QVTDGHRSATTQAYIRVLDINEHRPVFLKPLYEVSIPEDT 1586
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNP---ESYFNIDIGSGSL 140
S I+Q++A DLD + ++ + I + P F++D SG L
Sbjct: 1587 SPWKDILQISAQ--DLDSNSKLVFSIHSAVPPDSTGLFHLDPKSGVL 1631
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 48 SYFNID-IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ ID I G D L+ V IQVQ+VNDN P+ Y A + EN ++Q+
Sbjct: 2885 KWYQIDVIAQGNHNGTDVASLVSVSIQVQDVNDNQPVFDASPYRAFLTENMPAGTTVIQV 2944
Query: 106 AASDGDLDPDQRISYKI 122
A+D D D + ++Y +
Sbjct: 2945 TANDPDTDTNGLVTYSL 2961
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ VYI+V++VNDN P T +PVY +I+EN + +V + A D D + +++Y+
Sbjct: 115 PLSSFIEVYIEVEDVNDNAPQTSEPVYSPEIMENSPKDISVVHIEAFDPDPSSNDKLTYR 174
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F I +G
Sbjct: 175 ITSGNPQGFFTIHPKTG 191
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVY +I+EN + +V + A D D + +++Y+I++GNP+ +F I + L
Sbjct: 136 TSEPVYSPEIMENSPKDISVVHIEAFDPDPSSNDKLTYRITSGNPQGFFTIHPKTGLITT 195
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 196 TSRKLDREQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQFLQKFYKIRLPERE 255
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ PI ++ A+D D P+ ISY I GN F I+ +G
Sbjct: 256 KPDRDRNAKRDPIYRVIAADKDEGPNAEISYSIEEGNEHGKFFIEPKTG 304
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I EN P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 1185 PFYSAEIPENIQVHSPVVHVQANSPE---GLKVLYSITDGDPFSQFTINFNTGVIHVIAP 1241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V+++NDN P+ Y A + E
Sbjct: 1242 LDFEAHPAYKLSVRATDSLTGAHAEVF--VDIVVEDINDNAPVFAQQAYAATLSEASVIG 1299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+V++ A+D D +P++ ISY +S + +S +F+ID +G
Sbjct: 1300 TSVVRVRATDADSEPNRGISYHMSGNHSKSHDHFHIDSSTG 1340
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 8 YAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
YA + S I +V++ A+D D +P++ ISY +S + +S+ + I S TG V
Sbjct: 1288 YAATLSEASVIGTSVVRVRATDADSEPNRGISYHMSGNHSKSHDHFHIDSS-TGVISLVR 1346
Query: 67 LIVYIQVQN---------------------------VNDNVPMTLDP-VYYAQIVENQSG 98
+ Y QV+ +NDN P+ DP VY A+I E+ +
Sbjct: 1347 ALDYEQVRQHRIAVRAVDGGMPPLSSEVVVTVDVTDLNDNPPL-FDPHVYEAKISEHATH 1405
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D + Y I +GN + F +D +G
Sbjct: 1406 GHFVTCVKAYDADSSDADTLEYSILSGNDQKSFVMDGETG 1445
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
I+Q+ A+ D++ + I+Y I GN F+ID TG + YL V
Sbjct: 2249 ILQVYAASRDIEANADITYSIIGGNEHGKFSID---SKTGAIFIIENLDYESSHEYYLTV 2305
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ V ++NDN P+ Y A + E+ P++ + A D D
Sbjct: 2306 EATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVVSEDAILEQPVLTVMADDADGP 2365
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y I GN + F ID G +
Sbjct: 2366 LNSHIHYSIIDGNQGNPFTIDPTRGEV 2392
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVENQ G ++Q+ ASD D + ++ Y +
Sbjct: 1795 VSIQVKDANDNSPVLESNPYEAFIVENQPGGSRVIQVRASDLDSGANGQVMYSL 1848
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 31/147 (21%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------------------- 60
PI ++ A+D D P+ ISY I GN F I+ + L
Sbjct: 267 PIYRVIAADKDEGPNAEISYSIEEGNEHGKFFIEPKTGLVSSKKFSGAGEYDILSIKAVD 326
Query: 61 -GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ------IVENQSGILPIVQLAASDGDLD 113
G Q + + ++ ++ P +L+P+ + + ++E+ P+ +
Sbjct: 327 NGRPQKWSTTRLHIEWISKPKP-SLEPISFEESFFTFTVMESD----PVAHMIGVIAVEP 381
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
P + + I GN ES+F++D G+G++
Sbjct: 382 PGTPLWFDIIGGNYESHFDVDKGTGTI 408
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDP-DQRISYKISAGNPESYFNID-----------------------IGS 56
I L+ +D D + +++++Y I+ G+P F ++ +
Sbjct: 1937 IAILSTTDADSEEINRQVAYYITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYLLTI 1996
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T G IV ++V + NDN P+ +Y I E+ I+Q+AA+D D+ +
Sbjct: 1997 TATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDAFPGKLIMQVAATDADIRSNA 2056
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I+Y + E FN++ +G L
Sbjct: 2057 EITYTLFGPGAEK-FNLNPDTGEL 2079
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ I+Q+ A+ D++ + I+Y I GN
Sbjct: 2216 VVVSVLDINDNPPVFEYREYGASVSEDVLVGTEILQVYAASRDIEANADITYSIIGGNEH 2275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 2276 GKFSIDSKTGAI 2287
>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
mellifera]
Length = 3599
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L VY++V + NDN P+T PVYY ++EN + ++Q+ A D D+ P QR ++ I++GN
Sbjct: 46 LQVYVEVLDKNDNTPLTEVPVYYPSVLENSPAGVSVLQIRAFDRDVSP-QRFTFSITSGN 104
Query: 127 PESYFNIDIGSG 138
PE YF I+ +G
Sbjct: 105 PEGYFLINSTTG 116
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++EN + ++Q+ A D D+ P QR ++ I++GNPE YF I+ + L
Sbjct: 61 LTEVPVYYPSVLENSPAGVSVLQIRAFDRDVSP-QRFTFSITSGNPEGYFLINSTTGLIT 119
Query: 59 TGG--------PDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G + V + V I V ++ND+ P Y QI +
Sbjct: 120 TSGRKLDRENQAEHVLEVMVRDDGWPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPAS 179
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
S P+ Q+ A D D+ + +I Y I
Sbjct: 180 PSTDKPLFQVLAKDKDIGDNGKIQYSI 206
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y++++ E + + ++ A+ D + + Y I GN F ID + +
Sbjct: 2143 IYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARTGVIIIAEQL 2202
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P + V I V + NDN P+ + Y A I E+
Sbjct: 2203 DFERARDYFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 2262
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 2263 VIQVFANDLDSEENGNVSYYIERGDRQKQFSIDQKTGQI 2301
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-- 61
+ VY+ I EN I++L ASD D D+++ Y + A ++ I +TG
Sbjct: 374 ESVYHVDISENVEKGERILELHASDED--EDKKVFYSLHAAQNQASLEIFHVDSVTGAVT 431
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ Y V + V + ND+ P + + ++ E
Sbjct: 432 LNEVLDRETIEEHVLTVMVKDQGTPAKRNYARVVVTVHDHNDHAPEFISEIIQGKVYETS 491
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F ID
Sbjct: 492 PIGAAVVQVYAIDRDKGDNAKITYSITSGNVGNMFTID 529
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 1794 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEATVNEDALPGTVVVK 1851
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+P S F I
Sbjct: 1852 LITVDKDSDVNTPIEFYITSGDPRSQFQI 1880
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D++++Y I GN +
Sbjct: 1296 VWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDEKLTYTIVGGNEQ 1354
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 1355 QTYNIDQSTG 1364
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+P S F I ++
Sbjct: 1831 VDDRYEATVNEDALPGTVVVKLITVDKDSDVNTPIEFYITSGDPRSQFQIRSTGEVYVAK 1890
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +Q+ +VNDN P L Y + E +
Sbjct: 1891 SLDRETIDRYELEIVGTDGKYVFKTRVTVQILDVNDNPPYCLRYRYREILSEGSHPGTYV 1950
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 1951 LTVLATDYDDEPNAKLRFYLTGDNNDK-FSLDKETGVL 1987
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y+ ++ G P ++ +N+ I +
Sbjct: 2054 VTKVHATDDDIGINRKIRYEFIDSADGHFLIATDSGIVTLGKPLDRETKAMYNVTIQALD 2113
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + + + VQ++NDN P +Y++++ E + + ++ A+ D +
Sbjct: 2114 QGTPQLMSMTSLIVNVQDINDNPPEFASKIYFSKVPEIYAVGTEVARVLATSKDTGVNAD 2173
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I GN F ID +G
Sbjct: 2174 VYYSIVGGNEHKKFQIDARTG 2194
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ DGD +D D+R + I N ++++N+ I +T
Sbjct: 291 LVALVQATDKDGDYLWYDIIDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTI--RVT 348
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ + + V ++ND+ P + VY+ I EN I++L ASD D D+++
Sbjct: 349 DSVESAVTQLLVNVIDINDHRPEFTESVYHVDISENVEKGERILELHASDE--DEDKKVF 406
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D +G++
Sbjct: 407 YSLHAAQNQASLEIFHVDSVTGAV 430
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL------ 100
++N+ I + + + V + V + NDN P L VY +I E + G L
Sbjct: 647 KFYNLTIAATNMASA-KAHCNVIVHVLDRNDNAPRFLQAVYSGEISEGATIGSLVLTNTS 705
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P YF+ID +G++
Sbjct: 706 TPLV-IKAEDADSELNALLNYDIVEDLPRKYFHIDSSTGAI 745
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISY 120
P ++IV + + ++NDN PM ++ YYA + VE Q G + I ++ A D D + + Y
Sbjct: 979 PRVAHVIVNVTILDINDNCPMFVNLPYYAVVSVEAQKGDI-ITKVHAIDMDSGDNGEVRY 1037
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ G+ E F + +G +
Sbjct: 1038 ELKKGHGE-LFKVCRKTGEI 1056
>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
Length = 4539
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDL-------DPDQRISYKISAGNPESYFNID--- 53
D V+ ++ ENQ +++L A+D D D +I Y I+ G+ F ID
Sbjct: 1008 DFVFQGRVKENQPPNTSVMRLVATDADTLQNPLASRADSQIVYTITGGSGMRRFTIDNSG 1067
Query: 54 --------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
+ D P + V ++V+++NDNVP T PVY +
Sbjct: 1068 VIRTHGILDRESQAHYWLRVVACDRGTVPLCSTVEVLVEVEDLNDNVPQTEFPVYEPMVP 1127
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
EN +V L A D D + +++Y I +G+P+ +F+ID SG
Sbjct: 1128 ENSDAGHSVVNLEARDADDSKNNQLTYSIVSGDPQGFFSIDEKSG 1172
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R +Y+ S SD P +V I V + NDN P Y
Sbjct: 2856 LDREARDTYEFSV----------TASDRGSPPLSSVTLVKISVTDFNDNPPQFEQDEYEG 2905
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ E+ I+ + +SD DL P+ ++SY I G+P FN+
Sbjct: 2906 AVNEDALPGTIILMVTSSDADLSPNNQVSYSIREGDPLGQFNV 2948
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------TG 60
I+ + +SD DL P+ ++SY I G+P FN+ +L +
Sbjct: 2917 ILMVTSSDADLSPNNQVSYSIREGDPLGQFNVRHTGELYVNKQLDRERKFWYELTLVASD 2976
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRI 118
G V++ + + NDN P+ Y I E+ +++++ASD D + RI
Sbjct: 2977 GAHVTSTQVFVSILDANDNAPVCEQASYQKIISEDVDTGSFLLRVSASDADEKGTRNSRI 3036
Query: 119 SYKISAGNPESYFNIDIGSG 138
+ + GN + F+++ +G
Sbjct: 3037 KFLLD-GNHGNVFHMNERTG 3055
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
PVY + EN +V L A D D + +++Y I +G+P+ +F+ID S L
Sbjct: 1120 PVYEPMVPENSDAGHSVVNLEARDADDSKNNQLTYSIVSGDPQGFFSIDEKSGL 1173
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------- 56
D YYA+I EN + + + + AS L+ + +++ I NP F+I S
Sbjct: 1955 DHEYYAEIKENSTAVSRVAIVQASGHALN--EHLTFSIL--NPSDMFSIGATSGVVTTAG 2010
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D + P ++++ ++V + NDN PM ++ Y A + + +
Sbjct: 2011 KAFDREVQDEYTVVVEARDSSPSPRVAHVLLRVRVIDTNDNFPMFVNQPYMAIVSLDATR 2070
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D+ + +++Y I G F++ + SG +
Sbjct: 2071 GQVVYQVKAIDRDIGENGQVAYSIIEG-AAGLFSMQVDSGHI 2111
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQNVNDNVPM 82
AS G L + ++++A + + +G P Q + V + V ++ND+ P
Sbjct: 1798 ASTGSLKTKVTLDHEVAA-----VYEFSVQVQDSGVPSQSAMTAAQVTVHVMDINDSPPQ 1852
Query: 83 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+P Y +++ + + + A D D D + + Y I+ GN +F +D G+L
Sbjct: 1853 FSEPEYSVRLLLPTYPNVLVSTVVAHDADTDVNTELLYSITEGNDLEHFALDPTEGTL 1910
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 28/164 (17%)
Query: 5 PVYYAQ----IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
PV+ ++ I+E++ P++ + A D D + R+SY I +GN + F++D+ S +
Sbjct: 1477 PVFVSRTRVDIMEDEPVGYPLLHVIAVDRDARDNGRVSYSIVSGNEDGAFSLDVASGVLA 1536
Query: 59 ---------------------TGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + +V+I V+++NDN P + P+Y A + EN
Sbjct: 1537 VTRPLDRESQNRYALNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLYEAAVAENS 1596
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V+++A+D D+ + ++Y I G + F++D +G++
Sbjct: 1597 PAGTFVVKVSATDKDVGTNGNLTYAIPEGIADGMFSVDPTTGAV 1640
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNI--DIGSDL---- 58
VY A I E+ + ++ ++A+D D D I Y I GN S F I D G L
Sbjct: 2431 VYTAHISEDATRGTIVLHVSAADSDETRDNHNIDYSIENGNINSTFQITSDTGEILLVKT 2490
Query: 59 -----------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + V I V +VNDN P+ +Y ++ E Q+
Sbjct: 2491 VDREEISVFNLKVLAMDRGSPARNSTADVVIHVDDVNDNPPVFNQTLYEVKVSEAQAIGT 2550
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++AA+D D D + R+SY I++GN + F +D +G
Sbjct: 2551 ALLRVAATDRDHDENARLSYDITSGNDKGCFEVDPSTG 2588
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y ++ E Q+ ++++AA+D D D + R+SY I++GN + F +D +
Sbjct: 2537 LYEVKVSEAQAIGTALLRVAATDRDHDENARLSYDITSGNDKGCFEVDPSTGVISLKKPL 2596
Query: 57 DLTGGPDQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D + +++ + ++V++ NDN P Y + EN
Sbjct: 2597 DFEMSGEHRFIVRASDGHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEFVAENAPAGT 2656
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D P ++ Y I+ G + +FNID +G++
Sbjct: 2657 VVFTAHANDMDRGPYGKLKYSIAGGEGKDHFNIDPTTGTI 2696
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 31/157 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAA--SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
Y+ Q+ EN ++Q++A SDG QR++Y +GN E+ F I+ + L D
Sbjct: 2014 TYHVQLGENAPVGKDVIQVSAVRSDGRR---QRVTYSFGSGNEENTFEINSNNGLIRVRD 2070
Query: 64 QV--------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
Q Y V++ + + NDN P Y + + E +
Sbjct: 2071 QKRLDFESAPHLRLIVVAQAEGASPLYGYATVWVDLLDQNDNAPRFTQDSYTSAVWEGNN 2130
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++Q++A+DGD+ + I Y I GN ++ F I+
Sbjct: 2131 KGTFVMQVSATDGDMGANANIIYHIVDGNHDNAFVIE 2167
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP 62
P+Y A + EN +V+++A+D D+ + ++Y I G + F++D G+ T GP
Sbjct: 1586 PLYEAAVAENSPAGTFVVKVSATDKDVGTNGNLTYAIPEGIADGMFSVDPTTGAVTTTGP 1645
Query: 63 -DQVYLIVYIQVQNVND---------------------NVPMTLDPVYYAQIVENQSGIL 100
D+ YI V D + P + Y ++ EN S +
Sbjct: 1646 LDRERKSSYIVTIYVRDGSFPAQYDATSVVVNVLDVNDHAPQFGESCYPLRVPEN-SDLS 1704
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A+D D + I+Y I+ GN + F+ID+ +G L
Sbjct: 1705 VIHTVVATDADSGVNGEITYSITGGNVGNKFSIDLHTGQL 1744
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ A+D D +
Sbjct: 183 LDGGNPPLRGFMTVNITIQDVNDNQPIFNQSRYFASVAENATIGTSVLQVFATDTDAGDN 242
Query: 116 QRISYKISA--GNPESYFNIDIGSG 138
RI+Y I+ + +S F ID +G
Sbjct: 243 GRITYSINRRQSDRDSVFVIDPLTG 267
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V IQV +VNDN P Y + E ++ P+V + A+D D + Y I AGN
Sbjct: 623 MVKIQVVDVNDNRPTFYPREYNVSLRERETVNSPVVVVVATDKDAGKYGTVRYAIVAGNE 682
Query: 128 ESYFNIDIGSGSL 140
E F +++ SG +
Sbjct: 683 EGLFRVEMSSGEV 695
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAG 125
+ V IQ+ +VN+N P VY A I E+ + ++ ++A+D D D I Y I G
Sbjct: 2411 VAVRIQIADVNNNAPKFSQDVYTAHISEDATRGTIVLHVSAADSDETRDNHNIDYSIENG 2470
Query: 126 NPESYFNIDIGSGSL 140
N S F I +G +
Sbjct: 2471 NINSTFQITSDTGEI 2485
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP 62
+ Y ++ EN S + I + A+D D + I+Y I+ GN + F+ID+ + L+ P
Sbjct: 1690 ESCYPLRVPEN-SDLSVIHTVVATDADSGVNGEITYSITGGNVGNKFSIDLHTGQLSSRP 1748
Query: 63 ------DQVYLIVYIQ-----------------VQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ YLI+ Q V + ND+ P Y A + EN
Sbjct: 1749 LDRELKDRYYLIIAAQDRGVPSPRQGFCNITVSVDDENDSDPRFTQNRYTATLAENVQPD 1808
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+D D + +I+Y +S + F ID +G L
Sbjct: 1809 TIVMTVQATDADRGHNAKITYSLS-NETQWLFKIDNETGVL 1848
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ + EN ++ +AA D D D + Y + G S F+I D G+ T GP
Sbjct: 1038 VFKGWVQENSPEGTSVMMVAAKDIDKGKDGEVQYFLREGTGLSVFSIEKDTGTIRTIGPL 1097
Query: 63 -----DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+L V YI+V + NDN P PVYYA ++EN
Sbjct: 1098 DREGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVYYASVMENSPPNTS 1157
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++QL A D D + ++++ I GNP+ F I++ +G
Sbjct: 1158 VLQLDALDPDSSSEGKLTFHILTGNPQELFTINLVTG 1194
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
PVYYA ++EN ++QL A D D + ++++ I GNP+ F I++ + L
Sbjct: 1142 PVYYASVMENSPPNTSVLQLDALDPDSSSEGKLTFHILTGNPQELFTINLVTGLISTTSR 1201
Query: 63 --DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ Y V IQV + NDN P ++ Q+ E ++
Sbjct: 1202 QLDREYKAEHILEVAVSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQLPEREASE 1261
Query: 100 --LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
LP+ +L ASD D + +++Y I E F I+ +G
Sbjct: 1262 TPLPVYRLIASDRDQGQNSQVTYTIEE-EEEGIFTINPTTG 1301
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V ++V+++NDN P+ + +Y A + EN P+VQ+ ASD D ++ +SY+I +
Sbjct: 2265 VEVEVEDINDNPPVFSEIIYTASVSENMPAHTPVVQIFASDKDSGRNKMVSYQILDDGSD 2324
Query: 127 PESYFNIDIGSGSL 140
+FNID +G +
Sbjct: 2325 TTKFFNIDTSTGQI 2338
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDI--------- 54
+Y A + EN P+VQ+ ASD D ++ +SY+I + +FNID
Sbjct: 2283 IYTASVSENMPAHTPVVQIFASDKDSGRNKMVSYQILDDGSDTTKFFNIDTSTGQITTAQ 2342
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+D P +V + V ++NDN P Y A++ E +
Sbjct: 2343 ALDYEETQQFRMKVRAADHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATCG 2402
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN +F I+ SG
Sbjct: 2403 HIVIKVQALDPDSGDTTRLEYVILSGNDHRHFTINSTSG 2441
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 40/166 (24%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
Y +I E+ + P++Q++AS L P +SY+I GN + F+++
Sbjct: 1672 YITEISESAAVGSPLIQVSASS--LSP---VSYEIKDGNGDGVFSMNYQSGLISTQKSLD 1726
Query: 55 ------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGI 99
G+++ G +++Y V + NDNVP+ + P + I+EN QS +
Sbjct: 1727 FEQVSFYQLKVRGTNMAGAFMDTMVLIY--VIDENDNVPIFVKPAFIGWIMENAPPQSMV 1784
Query: 100 L-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L P+V A+D D D + + Y+I YF +D +G+L
Sbjct: 1785 LDESNAPLVT-HATDADQDSNALLVYEILEPEALKYFTVDPSTGTL 1829
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L P Y A + E+ + ++ L+A D + I Y+I GN F ++ + +
Sbjct: 3226 LAPEYVAMVKEDVAVGTEVLNLSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGALYIN 3285
Query: 60 GGPD-----QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D + YL +V I + ++ND+ P + Y+A I E+ +
Sbjct: 3286 GSLDFEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAV 3345
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ ++A D D + +I+Y I GNP+ +F I SG +
Sbjct: 3346 GEIILTVSADDLDGTMNNQITYSIVEGNPQGHFAIQPKSGQI 3387
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ ID+ + + ++ +V IQVQ++NDN P+ Y A ++EN ++Q+
Sbjct: 2768 KWYQIDVMAHCSHLETELVSLVSVNIQVQDINDNKPVFEADPYRAFVMENMPSGTTVIQV 2827
Query: 106 AASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
A+D D D +++Y + A GN F ID +G
Sbjct: 2828 TANDQDTGSDGQVTYSLEAESGNLRGLFTIDGETG 2862
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----------- 59
I+EN I L+A D D + ++ Y IS GN +S F ID+ L
Sbjct: 726 IIENVPINSTIADLSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQVLSPLDHERT 785
Query: 60 ------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V + NDN P Y+ I EN + I QL
Sbjct: 786 SFYILNITVYDLGTPQKSSWKLLAVNVLDTNDNTPRFPQGAYWVTIPENVATGTTIAQLK 845
Query: 107 ASDGDLDPDQRISYKI 122
A D D D + R+ Y +
Sbjct: 846 AEDADTDDNGRVKYSL 861
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V+N N + P Y A+ +++ + I+Q+ A D D + I Y + AG
Sbjct: 1545 FVRVIIHVENCNLHPPQFSSIHYEAEALDSAAVGTEILQVRALDQDQGANAEIHYSLQAG 1604
Query: 126 NPESYFNIDIGSG 138
N E +F+ID SG
Sbjct: 1605 NAEGFFSIDPHSG 1617
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--------- 57
Y A+ +++ + I+Q+ A D D + I Y + AGN E +F+ID S
Sbjct: 1567 YEAEALDSAAVGTEILQVRALDQDQGANAEIHYSLQAGNAEGFFSIDPHSGIITVAQKLD 1626
Query: 58 ---------LTGGPDQVY------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ DQ + V+++++ + P + Y +I E+ + P+
Sbjct: 1627 PSKQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDQTPPKFPEAEYITEISESAAVGSPL 1686
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q++AS L P +SY+I GN + F+++ SG
Sbjct: 1687 IQVSAS--SLSP---VSYEIKDGNGDGVFSMNYQSG 1717
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGS 56
DP Y+A I E+ + I+ ++A D D + +I+Y I GNP+ +F I I
Sbjct: 3333 DP-YFADIREDAAVGEIILTVSADDLDGTMNNQITYSIVEGNPQGHFAIQPKSGQISIAK 3391
Query: 57 DL----------------TGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L G P Q + V + V +VNDN P Y + EN
Sbjct: 3392 HLDREEISSYSLTVRATDNGHPAQFSDVAVRVHVSDVNDNPPRFFQLNYSVVVQENAPVG 3451
Query: 100 LPIVQLAASDGDLDPDQR--ISYKISAGNPESYFNI 133
+++L SD D P+ S++I+ GN F++
Sbjct: 3452 TSVLELIMSDRD-SPENGPPYSFQITQGNDGKAFDV 3486
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S F + + + G P + + V + V ++N+ +P+ L P Y A + E+ + ++
Sbjct: 3187 HSAFELTVCATDQGTPQPLSALGTVTVSVVDLNEYLPVFLAPEYVAMVKEDVAVGTEVLN 3246
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L+A D + I Y+I GN F ++ +G+L
Sbjct: 3247 LSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGAL 3282
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 21/149 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A++ E + ++++ A D D R+ Y I +GN +F I+ S +
Sbjct: 2391 YEAKVSEMATCGHIVIKVQALDPDSGDTTRLEYVILSGNDHRHFTINSTSGIISMFNRCK 2450
Query: 59 ----------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
D V+ + VYI N N P +Y A++ EN +++L
Sbjct: 2451 KDLESSYSLRVSASDGVFKSTVPVYINTTNANKYSPSFQQNMYEAELAENAEIGTKVIEL 2510
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNID 134
A D D P I Y I + F+ID
Sbjct: 2511 LAIDPDGGPYGTIDYTIINKLADEKFSID 2539
>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
Length = 4457
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A + E+ + +V L ASD DL D + Y+I G+ F ID
Sbjct: 1029 VYEALVKEDSAVGTSVVTLTASDKDLGRDGVVRYRIHDGSGLGVFTIDEETGVIRMTEML 1088
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+DL P + V+I+V +VNDN P P+Y+A + EN +
Sbjct: 1089 DRETAPHYWLSVYATDLGTEPLITWTHVFIEVLDVNDNAPELSQPMYFASVPENVDTVES 1148
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q++A+D D D ++S+++ + +F+ID +G
Sbjct: 1149 VIQVSATDVDTSSDGKLSFQMLESH-RLHFDIDPKTG 1184
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI---DIGS--- 56
+ VY +VEN + PIV + +D D+ + R I+ I+AG+P F I D G
Sbjct: 2904 EEVYRGSVVENSTPYEPIVYMTTTDADVSLENRLITCYITAGDPLGQFAIVQVDEGQWGL 2963
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
T G + + V + V ++NDN P+ VY ++EN
Sbjct: 2964 IVKESLDREARDRYALRVTATDGKFEAPISVDVHVLDINDNSPLCEQLVYTEVVMENSPS 3023
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +++++ASD D+ + +ISY + + + F+++ +G L
Sbjct: 3024 SVFVLKVSASDPDVGTNGQISYTLHGPDADK-FHLEHRTGEL 3064
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------------- 56
+VEN IVQ A+D D + ++ Y IS+GN + F+ID S
Sbjct: 717 LVENHPLNSTIVQFKATDNDSGFNSKLVYAISSGNEDGCFSIDTFSGDLRLVCPLDRESK 776
Query: 57 ----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
DL + + I V +VNDN P+ P Y + EN+ I
Sbjct: 777 EFYILNITVYDLGIPQTSAWKFIAINVMDVNDNPPVFDQPRYVIHVPENKEVNSVIFTCR 836
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D D ++ Y + F +D +G L
Sbjct: 837 AADLDSDMSGKVQYSLLTTT--DMFRMDEFTGEL 868
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGD------------LDPDQRISYKISAGNPES-- 48
L+P+Y ++ E+ S I+Q++A D D L PD S K+ +P+S
Sbjct: 1440 LEPLYEVRVPEDTSPWKDILQISAKDRDNNSKLVYSIHSSLHPD---STKLFHLDPKSGV 1496
Query: 49 --------YFNIDIGSDLTGGPDQ------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
Y I I + DQ + V + V++ ND+ P L P Y +
Sbjct: 1497 LVMTEELDYEKIAIHTLTVMVRDQGIPVKRNFAKVVVHVEDCNDHSPAFLSPRYEVGVSN 1556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D+ + ISY + +GN ++ F ID GS+
Sbjct: 1557 LAPAGTEVLRVKALDKDMGSNAHISYSLHSGNIDNVFTIDPDLGSI 1602
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------SAGNPESYFNID------- 53
Y A + EN ++Q+ A+D D D + ++Y + +A F+ID
Sbjct: 2795 YRAFLAENMPAGTTVIQVTANDPDTDTNGVVTYTLEPLPDDTALAITEVFSIDGESGWIT 2854
Query: 54 -----------------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ +D G ++V + V + NDN P + VY +VEN
Sbjct: 2855 TLRETDCEVTRVYRFNVVATDHGGNAKLSSSVLVEVMVTDENDNPPKFTEEVYRGSVVEN 2914
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ PIV + +D D+ + R I+ I+AG+P F I
Sbjct: 2915 STPYEPIVYMTTTDADVSLENRLITCYITAGDPLGQFAI 2953
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---------------- 49
VY ++EN + +++++ASD D+ + +ISY + + + +
Sbjct: 3012 VYTEVVMENSPSSVFVLKVSASDPDVGTNGQISYTLHGPDADKFHLEHRTGELFTLAVLD 3071
Query: 50 ------FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
FN+ + + GG + + VQ++NDN P Y + +N + P+
Sbjct: 3072 RERNVEFNLVVKA-TDGGGRSCQADILLMVQDMNDNPPRFSSSHYEVTVFDNTTVRTPVA 3130
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + + Y + +G+ + YF++D SG L
Sbjct: 3131 VVYAKDPDTGINSEVKYSLLSGD-DGYFSLDEFSGIL 3166
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 47 ESYFNIDIGSDLTGG-PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+FN+ I + G P V I V +VNDN P Y A + E ++++
Sbjct: 2332 RKHFNLKIKATDNGTIPLSSETFVTINVTDVNDNPPDFDSSRYKATLDEMAKCGHIVIKI 2391
Query: 106 AASDGDL-DPD-QRISYKISAGNPESYFNIDIGSG 138
ASD D D D + YKI +GN YFNI+ SG
Sbjct: 2392 HASDPDTGDSDLNNLKYKILSGNEGRYFNINESSG 2426
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 67 LIVYIQVQNVNDNV--PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
V I+V +VN+N+ P+ + VY A + E+ + +V L ASD DL D + Y+I
Sbjct: 1007 CFVEIEVLDVNENLHRPVFSEFVYEALVKEDSAVGTSVVTLTASDKDLGRDGVVRYRIHD 1066
Query: 125 GNPESYFNIDIGSG 138
G+ F ID +G
Sbjct: 1067 GSGLGVFTIDEETG 1080
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P+Y+A + EN + ++Q++A+D D D ++S+++ + +F+ID +
Sbjct: 1133 PMYFASVPENVDTVESVIQVSATDVDTSSDGKLSFQMLESH-RLHFDIDPKTGVISTVSA 1191
Query: 57 -DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS--G 98
D P+ + V IQV + NDN P ++ + ++ E + G
Sbjct: 1192 LDREDKPEHSIEVIVSDNGSPALSSTATVVIQVLDANDNPPKFMEKRFDVKLPEQRHDGG 1251
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ A D D + ++Y + N + F ID +G
Sbjct: 1252 KQEVCRILAQDNDEGLNAAVTYSLQE-NMDEQFEIDPVTG 1290
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 48 SYFNID-IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ ID I G D L+ V IQVQ+VNDN P+ Y A + EN ++Q+
Sbjct: 2753 KWYQIDVIAQGNHNGTDVASLVSVSIQVQDVNDNQPVFDASPYRAFLAENMPAGTTVIQV 2812
Query: 106 AASDGDLDPDQRISYKI 122
A+D D D + ++Y +
Sbjct: 2813 TANDPDTDTNGVVTYTL 2829
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPES 129
+ V N+N++ P+ L+P+Y ++ E+ S I+Q++A D D + ++ Y I S+ +P+S
Sbjct: 1427 MSVLNINEHRPIFLEPLYEVRVPEDTSPWKDILQISAKDR--DNNSKLVYSIHSSLHPDS 1484
Query: 130 --YFNIDIGSGSL 140
F++D SG L
Sbjct: 1485 TKLFHLDPKSGVL 1497
>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Bombus terrestris]
Length = 3597
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L VY++V + NDN P+T PVYY ++EN + ++Q+ A D D+ P Q+ ++ I++GN
Sbjct: 41 LQVYVEVLDRNDNTPLTEVPVYYPSVLENSPAGVSVLQIQAFDRDVSP-QQFTFSITSGN 99
Query: 127 PESYFNIDIGSG 138
PE YF I+ +G
Sbjct: 100 PEGYFLINSTTG 111
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+T PVYY ++EN + ++Q+ A D D+ P Q+ ++ I++GNPE YF I+ + L
Sbjct: 56 LTEVPVYYPSVLENSPAGVSVLQIQAFDRDVSP-QQFTFSITSGNPEGYFLINSTTGLIT 114
Query: 59 TGG--------PDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
T G + V + V I V ++ND+ P Y QI +
Sbjct: 115 TSGRKLDRENQAEHVLEVTVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPAS 174
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
S P+ Q+ A+D D+ + +I Y I
Sbjct: 175 PSTDKPLFQVLANDKDIGDNGKIQYSI 201
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY++++ E + + ++ A+ D + + Y I GN F ID S + +Q+
Sbjct: 2138 VYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARSGVITIAEQL 2197
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V I V + NDN P+ + Y A I E+
Sbjct: 2198 DFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASIREDAKIGEK 2257
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 2258 VTQVFANDLDSEENGNVSYYIERGDRQKQFSIDEKTGQI 2296
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 29/156 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y+ I EN I+QL A+D D D+++ Y + A ++ I +TG
Sbjct: 371 IYHVDISENVEKGEKILQLHATDED--EDKKVFYSLHAAQNQASLEIFHVDSVTGAVTLN 428
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ Y V I V + ND+ P + + ++ E
Sbjct: 429 EVLDRETIEEHVLTVMVKDQGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPI 488
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F ID
Sbjct: 489 GAAVVQVYAIDRDRGDNAKITYSITSGNVGNMFAID 524
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y+ ++ G P ++ +N+ I +
Sbjct: 2049 VTKVHATDNDIGINRKIRYEFIDSADGHFLIAADSGIVTLGKPLDRETKAMYNVTIQAVD 2108
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + + + VQ++NDN P VY++++ E + + ++ A+ D +
Sbjct: 2109 QGTPQLMSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVGTEVARVLATSKDTGVNAD 2168
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I GN F ID SG
Sbjct: 2169 VYYSIVGGNEHKKFQIDARSG 2189
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D +++Y I GN +
Sbjct: 1291 VWVTVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDDKLTYTIVGGNEQ 1349
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 1350 QTYNIDQSTG 1359
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ A DGD +D D+R + I N ++++N+ I +
Sbjct: 286 LVALVQAADKDGDSLWYDIVDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTIRVTDS 345
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ L+V V ++ND+ P + +Y+ I EN I+QL A+D D D+++
Sbjct: 346 VHTAETQLLV--TVIDINDHRPEFTENIYHVDISENVEKGEKILQLHATDE--DEDKKVF 401
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D +G++
Sbjct: 402 YSLHAAQNQASLEIFHVDSVTGAV 425
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 1789 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDALPGTVVVK 1846
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+ S F I
Sbjct: 1847 LITMDKDSDVNTPIEFYITSGDSRSQFQI 1875
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL-------PIVQLAASDGDLDPD 115
+ + V + V + NDN P L Y +I E S G L P+V + A D D + +
Sbjct: 657 KAHCNVIVHVLDRNDNAPRFLQATYNGEISEGASIGSLVLTNSSTPLV-IKAEDADSELN 715
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++Y I P YF+ID +G++
Sbjct: 716 ALLNYDIVEDLPRKYFHIDSSTGAI 740
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 27/155 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------TGGP 62
+ EN ++Q+ A+D D D + Y I G+ F ID + +
Sbjct: 1053 VKENARIGTTLLQVTANDDDAGRDGEVQYSIRDGSGLGRFAIDEETGVIYTTDMLDRESK 1112
Query: 63 DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D +L VY IQV++VNDN P+T +P+Y + EN + ++Q+
Sbjct: 1113 DSYWLTVYATDHGVVPQFTSIDVFIQVEDVNDNAPLTSEPLYRTSVPENSPRDVSVIQIE 1172
Query: 107 ASDGDL---DPDQRISYKISAGNPESYFNIDIGSG 138
A D D +R++Y+I +GNP+++F I+ +G
Sbjct: 1173 AQDPDATLSTTAERLNYRIISGNPQNFFTINTRTG 1207
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 30/164 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGNPESYFNIDIGSD 57
+T +P+Y + EN + ++Q+ A D D +R++Y+I +GNP+++F I+ +
Sbjct: 1148 LTSEPLYRTSVPENSPRDVSVIQIEAQDPDATLSTTAERLNYRIISGNPQNFFTINTRTG 1207
Query: 58 LT-----------------------GGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
L GGP+ Q + V +QV + NDN P+ + VY ++
Sbjct: 1208 LITTTSRKLDREQQTEHILEVLVSDGGPNPKQSTVWVIVQVLDENDNKPIFPEKVYQVKL 1267
Query: 93 VENQSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
E + PI ++ A D D P+ +SY I GN + F ID
Sbjct: 1268 PERERRKKGEPIYRVFAYDRDDGPNCDLSYSIVDGNEDGKFFID 1311
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP-----DQVYLI----- 68
++++ A+ D+ + I+Y I +GN F+I G+ L P + Y +
Sbjct: 3268 VLRVYAASKDIGTNAEITYSIRSGNEHGKFHIHPLTGAILVAQPLDYETCRDYFLTVEAR 3327
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I + +VNDN PM VY A + E+ + P++QL A D D +
Sbjct: 3328 DGGTPSLSAITTVNIDLTDVNDNPPMFSHSVYTAVVSEDATVGEPVIQLKADDVDSQLNG 3387
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+ Y I +G+ + F ID SG
Sbjct: 3388 AVLYSIVSGDRHNQFLIDPLSG 3409
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V++VND+VP +Y + E+ + +VQ+ A D D + + Y I AGN
Sbjct: 1556 VLIEVEDVNDHVPNFTSALYEGSVYESAAVGSAVVQVTALDKDKGENAELHYSIEAGNSG 1615
Query: 129 SYFNID 134
+ F ++
Sbjct: 1616 NTFQVE 1621
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A ++E+ + +++L ASD D+ D + I G+ F+ID
Sbjct: 994 VYEAAVMEDAAVGTSVLKLTASDKDVGRDGEFRFHIQDGSGLGVFSIDEETGVICSAKIL 1053
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ DL P + V+++V +VNDN P PVY+A + EN G+
Sbjct: 1054 DREKMPHYWLSVLVGDLGTEPLLSWTHVFLRVLDVNDNAPQLSQPVYFASVQENVDGVGS 1113
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ Q+ A+D D + ++S+ + + ++F++D +G
Sbjct: 1114 VAQVWATDADASSEGKLSFHMLESH-RTHFDVDPKTG 1149
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNID--IGSDLTG------GPDQVYLI-- 68
+VQ++ASDGD ++ +++ + + N +F+ID G +T G +Q +L
Sbjct: 2235 VVQVSASDGDSGRNRDLTFHMLRTERNETEFFDIDPHTGVIVTKQVLDHEGTNQFHLKIR 2294
Query: 69 --------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
V + V +VNDN P + Y A + E ++++ ASD D
Sbjct: 2295 ATDNGTAPLSSEASVLVNVTDVNDNPPDFVSSQYEATLDEKAKCGHIVIKIQASDPDSGD 2354
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ YKI +GN YFNI+ SG
Sbjct: 2355 LNKLQYKILSGNEGRYFNINQSSG 2378
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----IGSDLT- 59
PVY+A + EN G+ + Q+ A+D D + ++S+ + + ++F++D + S L+
Sbjct: 1098 PVYFASVQENVDGVGSVAQVWATDADASSEGKLSFHMLESH-RTHFDVDPKTGVVSTLSA 1156
Query: 60 ------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ--SG 98
G P V I+V + NDN P D +++ +I E + +G
Sbjct: 1157 LDREEKEEHSVEVVVSDNGSPSLSSTTTVVIRVLDDNDNQPKFTDKLFHIKIPEQRRSAG 1216
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ ++ A D D + ++Y++ + E F ID
Sbjct: 1217 EQEVYRMVARDDDRGSNAAVTYRLQDDHSER-FKID 1251
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSD-------- 57
Y +VEN S +V + +D D+ + R ++ I+ G+P +F I S+
Sbjct: 2861 YRGSVVENSSPGEVLVSMTTADADVSLENRLVTCYITDGDPLGHFAIIQQSEGGWGLILT 2920
Query: 58 ----------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
T G Q + V + V ++NDN P VY ++EN
Sbjct: 2921 QPLDREVKDRHALRVMATDGKFQASVSVDVHVLDINDNSPQCEQLVYTEAVMENSPSSRF 2980
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A D D+ + ++SY + N + F+++ +G L
Sbjct: 2981 VLKVSAVDPDVGANGQVSYSLHGPNADK-FHLNYRTGEL 3018
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V I+V++VNDN P+ Y A + E +VQ++ASDGD ++ +++ + + N
Sbjct: 2202 VEIEVEDVNDNAPVFSQRAYGAVVAEGLPVGTSVVQVSASDGDSGRNRDLTFHMLRTERN 2261
Query: 127 PESYFNIDIGSG 138
+F+ID +G
Sbjct: 2262 ETEFFDIDPHTG 2273
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT-------------------- 59
+V+L A+D D + Y ISAGN + F+ID DL
Sbjct: 692 VVRLRATDADSGFGSLLVYAISAGNQDGCFSIDTFAGDLRLVCSLDRERNAFYVLNITVY 751
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + V + V +VNDN P Y ++ EN + A+D DLD
Sbjct: 752 DLGMPQKTAWRFVAVTVTDVNDNPPEFDQLRYVTRVPENAEVDSVVFTAHAADPDLDVGG 811
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ + + P + F+ID +G +
Sbjct: 812 RLRFSLL--TPTNAFSIDPVTGEV 833
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV--PMTLD 85
+ +LD ++R SY ++ + + S V I+V +VN+N+ P+ +
Sbjct: 942 ERELDFERRRSYTLTVRAVDHGLPRSLSSSC---------FVEIEVLDVNENLHRPLFSE 992
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
VY A ++E+ + +++L ASD D+ D + I G+ F+ID +G
Sbjct: 993 FVYEAAVMEDAAVGTSVLKLTASDKDVGRDGEFRFHIQDGSGLGVFSIDEETG 1045
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ IQVQ+VNDN P+ Y A + EN ++Q+ A+D D + + ++Y +
Sbjct: 2728 ISIQVQDVNDNEPLFDASPYRAFLAENMPAGTTVIQVTANDADSETNGLVTYSL 2781
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E ++++ ASD D ++ YKI +GN YFNI+ S +
Sbjct: 2328 YEATLDEKAKCGHIVIKIQASDPDSGDLNKLQYKILSGNEGRYFNINQSSGIVSFSNVCR 2387
Query: 61 ---------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G Q V I + + N + P VY A++ EN +++L
Sbjct: 2388 RNLEPFYNLTVAVSDGVFQKTARVNIDMLSTNKHSPSFKQSVYEAELAENAEVGTQVIRL 2447
Query: 106 AASDGDLDPDQ 116
AA +DPD+
Sbjct: 2448 AA----IDPDE 2454
>gi|332019419|gb|EGI59903.1| Protocadherin Fat 3 [Acromyrmex echinatior]
Length = 134
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L VY++V + NDN P+T PVYY + EN + ++Q+ A D D+ P Q + + IS+GN
Sbjct: 37 LQVYVEVLDENDNTPLTELPVYYPSVPENSPASVSVLQIHAFDHDVSPQQFV-FTISSGN 95
Query: 127 PESYFNIDIGSG 138
PE YF I+ +G
Sbjct: 96 PEGYFLINSTTG 107
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
+T PVYY + EN + ++Q+ A D D+ P Q + + IS+GNPE YF I+ + L
Sbjct: 52 LTELPVYYPSVPENSPASVSVLQIHAFDHDVSPQQFV-FTISSGNPEGYFLINSTTGL 108
>gi|410909630|ref|XP_003968293.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4673
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------------- 45
A + EN ++Q+ A+D D D I Y I G+
Sbjct: 1110 ATVKENARIGTTLLQVTANDDDASRDGEIQYSIRDGSGLGRFAINEETGMIYTTDILDRE 1169
Query: 46 -PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+SY+ +D P + V+IQV++VNDN P+T + +Y + EN + ++Q
Sbjct: 1170 TKDSYWLTVYATDRGVVPQFATIEVFIQVEDVNDNAPLTSEAMYQCTVHENSPDGVSVIQ 1229
Query: 105 LAASDGD---LDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D L PD ++SY I +GNP++ F I+ +G
Sbjct: 1230 IQAQDPDDTALSPD-KLSYHIISGNPQNLFTINTNTG 1265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 31/164 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGD---LDPDQRISYKISAGNPESYFNIDIGSD 57
+T + +Y + EN + ++Q+ A D D L PD ++SY I +GNP++ F I+ +
Sbjct: 1207 LTSEAMYQCTVHENSPDGVSVIQIQAQDPDDTALSPD-KLSYHIISGNPQNLFTINTNTG 1265
Query: 58 LT-----------------------GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQI 92
L GP + +V++ V+ + NDN P+ + +Y ++
Sbjct: 1266 LITTTSRKLDREQQAEHNLEVMVSDSGPSPKHSVVWVTVRVLDENDNKPIFPEKIYQVKL 1325
Query: 93 VENQSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
E + PI ++ A D D P+ +SY I GN ++ F ID
Sbjct: 1326 PERERRKKGEPIYRVFAYDRDEGPNSDLSYSIVDGNEDTKFFID 1369
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT------------------- 59
++++ A+ D+ + I+Y I +GN F+I G+ L
Sbjct: 3324 VLRVHAASKDIGTNAEITYSIRSGNEHGKFHIQPRTGAILVSQPLDYETCRDYFLTVEAR 3383
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V I + +VNDN P+ +Y A + E+ + ++Q+ A D D P+
Sbjct: 3384 DGGTPPLSAITTVNINITDVNDNAPVFSCQLYTAVVSEDAAMGDSVIQVVAEDVDSKPNG 3443
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+ Y I AGN + F+ID SG
Sbjct: 3444 DVLYTIIAGNQGNQFSIDPTSG 3465
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
+ Q++A DGD + +I Y IS GN ++ F ID+ +
Sbjct: 804 VFQVSAYDGDTGFNGQILYSISDGNIDNCFTIDMDTGLISVLLPLDREKMDHYLLNLTIF 863
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPD 115
DL P + ++ + +++ NDN P L Y ++ + I ++Q+ A+D D P+
Sbjct: 864 DLGRPPKSAWHLLTVFIEDTNDNAPQFLQEGGYMIVIPENTAIGTDVIQVGATDRDAGPN 923
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
I Y I P + F I+ +G
Sbjct: 924 GEIVYSILT--PATNFGINSTNG 944
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V ++V++VND+VP+ VY + E+ + +VQ+ A D D + + Y I AGN
Sbjct: 1613 VLVEVKDVNDHVPIFTRSVYEGSVYESSAVGSAVVQVTALDKDKGRNADLQYSIEAGNKG 1672
Query: 129 SYFNID 134
+ F+I+
Sbjct: 1673 NTFHIE 1678
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 34/162 (20%)
Query: 5 PVYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGS---- 56
P Y ++EN S I+ +V L S + + I+ GN +S F++D +G+
Sbjct: 1426 PFYNFTVMENDKVSEIVGVVSLQQSS------TTVWFDITGGNSDSVFHVDKTVGTIIIA 1479
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
T G + V++ V + NDN P+ P Y + E+
Sbjct: 1480 KPLDAEQQPSYNLTVQATDGTKTAHTQVHVTVLDNNDNAPVFSQPTYDVTVSEDIPPDAE 1539
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPES--YFNIDIGSGSL 140
+VQ+ AS D D ++SY + S+ +P S +F I G++
Sbjct: 1540 VVQVVAS--DRDKHHQLSYSLQSSIDPSSMRFFRIHPTLGTI 1579
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ + EN ++ + A D D D + Y + G S F+I D G+ T GP
Sbjct: 1038 VFKGWVQENSPEGTSVMMVTAKDIDKGKDGEVQYFLREGTGLSVFSIEKDTGTIRTIGPL 1097
Query: 63 -----DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+L V YI+V + NDN P PVYYA ++EN
Sbjct: 1098 DREGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVYYASVMENSPPNTS 1157
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++QL A D D + ++++ I GNP+ F I++ +G
Sbjct: 1158 VLQLDALDPDSSSEGKLTFHILTGNPQGLFAINLVTG 1194
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
PVYYA ++EN ++QL A D D + ++++ I GNP+ F I++ + L
Sbjct: 1142 PVYYASVMENSPPNTSVLQLDALDPDSSSEGKLTFHILTGNPQGLFAINLVTGLISTTSR 1201
Query: 63 --DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ Y V IQV + NDN P ++ Q+ E ++
Sbjct: 1202 QLDREYKAEHILEVAVSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQLPEREASE 1261
Query: 100 --LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
LP+ +L ASD D + +++Y I E F I+ +G
Sbjct: 1262 TPLPVYRLIASDRDQGQNSQVTYTIEE-EEEGIFTINPTTG 1301
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V ++V+++NDN P+ + +Y A + E+ P+VQ+ ASD D ++ +SY+I +
Sbjct: 2265 VEVEVEDINDNPPVFSEMIYTASVSESMPAHTPVVQIIASDKDSGRNKVVSYQILDDGSD 2324
Query: 127 PESYFNIDIGSGSL 140
+FNID +G +
Sbjct: 2325 ATKFFNIDASTGQI 2338
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDI--------- 54
+Y A + E+ P+VQ+ ASD D ++ +SY+I + +FNID
Sbjct: 2283 IYTASVSESMPAHTPVVQIIASDKDSGRNKVVSYQILDDGSDATKFFNIDASTGQITTAQ 2342
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+D P +V + V ++NDN P Y A++ E +
Sbjct: 2343 ALDYEKTQQFRMKVRAADHGTPPLSSDALVIVNVTDINDNPPEFSQLQYEAKVSEMATCG 2402
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN +F I+ SG
Sbjct: 2403 HIVLKVQALDPDSGDTTRLEYVILSGNDHRHFTINSTSG 2441
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 4 DPVYYAQI--VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
DP+ Y+ + +S + L G L + + ++ + ++ ID+ + +
Sbjct: 2727 DPIIYSLVKGTTTESNKDEVFTLDEQTGALKIKKAVDHETT-----KWYQIDVMAHCSHQ 2781
Query: 62 PDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
++ +V IQVQ++NDN P+ Y A ++EN ++Q+ A+D D D +++
Sbjct: 2782 ETELVSLVSVNIQVQDINDNKPVFEADPYKAFVMENMPSGTTVIQVTANDQDTGSDGQVT 2841
Query: 120 YKISA--GNPESYFNIDIGSG 138
Y + A G F ID +G
Sbjct: 2842 YSLEAESGKLRGLFTIDGETG 2862
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----------- 59
I+EN I L+A D D + ++ Y IS GN +S F ID+ L
Sbjct: 726 IIENVPINSTIADLSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQILSPLDHERT 785
Query: 60 ------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V + NDN P Y+ I EN I QL
Sbjct: 786 SFYILNITVYDLGTPQKSSWKLLAVNVLDTNDNTPRFPQGAYWVAIPENVVTGTTIAQLK 845
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D D + R+ Y + P F I+ +G +
Sbjct: 846 AEDADTDDNGRVKYSLLT--PTDKFAINSVTGEV 877
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL--- 100
S++ + + G+++ G +++Y V + NDNVP+ + P + IVEN QS +L
Sbjct: 1731 SFYQLKVRGTNMAGAFMDTMVLIY--VIDENDNVPIFVKPAFIGWIVENAPPQSMVLDES 1788
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V A+D D D + + Y+I YF +D +G+L
Sbjct: 1789 NSPLVT-HATDADQDSNALLVYEILEPEALKYFTVDPSTGTL 1829
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V+N N + P Y A+ +++ + IVQ+ A D D + I Y + AG
Sbjct: 1545 FVRVIIHVENCNLHPPQFSSIHYEAETLDSAAVGTEIVQVRALDQDQGANAEIHYSLQAG 1604
Query: 126 NPESYFNIDIGSG 138
N E +F+ID SG
Sbjct: 1605 NGEGFFSIDPHSG 1617
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L P Y A + E+ + ++ L+A D + I Y+I GN F ++ + +
Sbjct: 3226 LAPEYVAMVKEDVAVGTEVLNLSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGALYIN 3285
Query: 60 GGPD-----QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D + YL +V I + ++ND+ P + Y+A I E+ +
Sbjct: 3286 GSLDFEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAV 3345
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ ++A D D + +I+Y I GNP +F I SG +
Sbjct: 3346 GEIILTVSADDLDGAMNNQITYSIVEGNPLGHFAIQPKSGQI 3387
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNID-------I 54
DP Y A ++EN ++Q+ A+D D D +++Y + A G F ID
Sbjct: 2808 DP-YKAFVMENMPSGTTVIQVTANDQDTGSDGQVTYSLEAESGKLRGLFTIDGETGWITT 2866
Query: 55 GSDLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+L + Y +V + V + NDN P Y ++EN
Sbjct: 2867 LKELDCETQETYRFYVVATDHGRKVQLSSQTLVEVTVSDENDNAPQFTSDFYKGSVIENA 2926
Query: 97 SGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID 134
IV L+ D D+ + ++R++ I+ G+ F +D
Sbjct: 2927 EPGQVIVTLSTIDADISEQNRRVTCYITEGDVLGQFTVD 2965
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S F + + + G P + + V + V ++N+ +P+ L P Y A + E+ + ++
Sbjct: 3187 HSAFELTVCATDQGTPQPLSALGTVTVSVVDLNEYLPVFLAPEYVAMVKEDVAVGTEVLN 3246
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L+A D + I Y+I GN F ++ +G+L
Sbjct: 3247 LSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGAL 3282
>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
Length = 4656
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 27/146 (18%)
Query: 22 VQLAASDGDLDP---DQRISYKISAGNPESYFNID-----------------------IG 55
V L+A+ D DP D R++Y I AG+ +++F+ID
Sbjct: 1125 VVLSAAATDADPPGRDSRLAYYIVAGSGKAHFSIDDTGVIRSQTPLDRETTAHYWLTVCA 1184
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
D P + VYI+V++VND P Y A + E+ +G + ++ A D D P
Sbjct: 1185 QDHGLVPRHSCVEVYIEVEDVNDMSPWPEQAEYSASVPEHCAGGTSVARVVALDADASPT 1244
Query: 116 -QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y I AGNP+ F+ID +GS+
Sbjct: 1245 PARLRYSIVAGNPDGLFSIDEYTGSI 1270
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A + E + +V++ A+ D + + Y + G+ F+++ + +
Sbjct: 3349 YHAAVPEIDAPGTEVVRVMATSRDTGVNADVYYSLVGGDDREDFSVNRSTGIVSIARPLD 3408
Query: 60 ---------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG P + + I + + NDN P+ Y A++ E+ + I
Sbjct: 3409 YERRKEYYLTVQAVDGGSPPLSDHATINITIMDSNDNPPVFSQTSYGAKVREDAGVGVRI 3468
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
VQ+ A D D + R++Y I+ G+P++ F ID +G
Sbjct: 3469 VQVIADDADAGTNGRVTYSIARGDPDNCFTIDADTG 3504
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y A++ E+ + IVQ+ A D D + R++Y I+ G+P++ F ID + S L
Sbjct: 3454 YGAKVREDAGVGVRIVQVIADDADAGTNGRVTYSIARGDPDNCFTIDADTGYISVSSRLD 3513
Query: 60 GGPDQVYL-----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y+ +V ++V + NDN P+ Y + EN+ I
Sbjct: 3514 RESKPAYVLEVRARDRGLPALEATAVVNVEVLDANDNPPLFEKTNYTEVVQENKPLGHTI 3573
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
++ +D D P+ ++ +GN F ++
Sbjct: 3574 LKFIVTDADAPPNSAPYTFDFQSGNEMGAFRLE 3606
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 21/145 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y A++ E+ + + +L D D+ +SY +SAG+P + F + +L
Sbjct: 3041 IYSAEVREDAAAGTVVTRLMVQDDDVS-GAPLSYFVSAGDPRARFQVRASGELLVARALD 3099
Query: 59 -------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
T G Y V+I + +VNDN P + Y ++ E+ +V L
Sbjct: 3100 RETEPAYSLSVAATDGKFTAYTAVHITIIDVNDNPPYCVRHRYRVRLSEDAPRGTRLVSL 3159
Query: 106 AASDGDLDPDQRISYKISAGNPESY 130
D D + R+ Y ++ E +
Sbjct: 3160 LTRDDDEPQNARLRYFLTGEQAEHF 3184
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 14/134 (10%)
Query: 21 IVQLAASDGDLDPDQRISYKISAG-------------NPESYFNIDI-GSDLTGGPDQVY 66
I L DGD D R+ G N +N+ + +D P Y
Sbjct: 348 IASLEIVDGDPDGHFRVKNSAQQGEYDVIAHALLDRQNAPLGYNLTLKATDAGKPPRSSY 407
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + I + ++NDN P+ +Y A + E P+++L SD + + R+ +I GN
Sbjct: 408 LTLPITLVDINDNSPVFSREIYEASLPETAPPNTPVIRLKVSDRNQGSNARVYIEIVGGN 467
Query: 127 PESYFNIDIGSGSL 140
F ++ +G L
Sbjct: 468 EGGEFIVNPDTGVL 481
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 60 GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG ++V + V+I V +VNDN P+ + Y A ++ P++++ A D D + + +
Sbjct: 2171 GGAERVSHARVHIAVTDVNDNCPVFTERPYIAAVLAGAEPGAPVLRVHAVDADANDNGEV 2230
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y++ G+ E F +D SG +
Sbjct: 2231 RYEMKRGHGE-LFRVDRRSGQI 2251
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-LT----- 59
V+ A+ +ENQ L + + A D D ++Y I + F ID S LT
Sbjct: 2619 VHEARALENQPPPLLLTTVKAYDDDAGEYGTVTYSIPSAKLRETFAIDPNSGALTTRVPL 2678
Query: 60 ----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
GG + V ++V ++NDN P Y A ++ +P +
Sbjct: 2679 DRERRAEWEVPVMASDGGGLLRHTAVRVRVADLNDNAPAFPLREYRAAAKHDRVPGVPFL 2738
Query: 104 QLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGSL 140
L+ASD D+ + R+SY + G + F +D +G+L
Sbjct: 2739 TLSASDEDVGENARLSYSVYEGELKTDAAGLFAVDPLTGAL 2779
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNID--IGSDLTGG 61
Y A + E+ +G + ++ A D D P R+ Y I AGNP+ F+ID GS T G
Sbjct: 1217 YSASVPEHCAGGTSVARVVALDADASPTPARLRYSIVAGNPDGLFSIDEYTGSITTTG 1274
>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3085
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------------- 45
A + EN ++Q+AA D D+ D I Y I G+
Sbjct: 1036 ATVKENARIGTTLLQVAAQDDDVGRDGEIQYSIRDGSGLGRFAINEETGVIYTTDTLDRE 1095
Query: 46 -PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+SY+ +D P + V++QV++VNDN P+T + +Y + + EN + +VQ
Sbjct: 1096 TKDSYWLTVYATDRGVVPQFATIAVFVQVEDVNDNAPLTSEAMYDSSVQENSPEGVSVVQ 1155
Query: 105 LAASDGDLDP--DQRISYKISAGNPESYFNIDIGSG 138
+ A D D P +++S+ I +GNP++ F I+ +G
Sbjct: 1156 IQAQDPDETPLTAEKLSFHIVSGNPQNLFAINSHTG 1191
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 52/186 (27%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKISAGNPESYFNIDIGSDL 58
+T + +Y + + EN + +VQ+ A D D P +++S+ I +GNP++ F I+ + L
Sbjct: 1133 LTSEAMYDSSVQENSPEGVSVVQIQAQDPDETPLTAEKLSFHIVSGNPQNLFAINSHTGL 1192
Query: 59 T----------------------------------------------GGPDQVYLIVYIQ 72
GP + +V++
Sbjct: 1193 ITTTSRKLDREQQTEHNLEASVCVRDAGVWYRASHWSVWPLQVMVSDSGPSPKHSVVWVT 1252
Query: 73 VQNV--NDNVPMTLDPVYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+ + NDN P+ + VY ++ E + PI ++ A DGD P+ +SY I+ GN +
Sbjct: 1253 VRVLDDNDNKPIFPEKVYQVKLAERERRKKAEPIYRVFAYDGDQGPNSDLSYSIADGNED 1312
Query: 129 SYFNID 134
+ F ID
Sbjct: 1313 AKFFID 1318
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 27/143 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
+ Q++A DGD + +I Y IS GNP+ F +D +
Sbjct: 730 VFQVSAYDGDTGFNGQILYSISDGNPDDCFTMDTDTGLISVLLPLDREKKDHYLLNLTIY 789
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPIVQLAASDGDLDPD 115
DL P + ++ + +++ NDN P L Y ++ EN + ++Q+ A+D D P+
Sbjct: 790 DLGRPPKSAWHLLTVFIEDANDNAPQFLQEGGYTVVLPENTAIGTDVIQVGATDRDAGPN 849
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
++Y + F I+ SG
Sbjct: 850 GEVAYSLLTATAN--FGINSTSG 870
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V++VND+VP+ Y + E+ + +VQ++A D D + + Y I +GN
Sbjct: 1598 VLIEVKDVNDHVPIFTRSTYEGSVCESSAVGSAVVQVSALDKDKGENADVQYSIESGNKG 1657
Query: 129 SYFNID 134
+ F+I+
Sbjct: 1658 NTFHIE 1663
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
VY AQ+ EN +VQ+ A+D D R++Y F+ID +T
Sbjct: 2545 VYEAQVKENSVVGTRVVQVKATDSDPGVFGRVTYSFVNDVGRERFSIDANGQITTAEKLD 2604
Query: 62 ---PDQVYLIVYIQVQNV----------------NDNVPMTLDPVYYAQIVENQSGILPI 102
P Y++V + Q+ NDN P Y A + + + +
Sbjct: 2605 REDPSNQYVVVSVAAQDAGGHVSYATVQVSLVDENDNAPHFWATEYRASVRSSVAEGFLL 2664
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ ASD D + RI+Y I
Sbjct: 2665 TQVQASDPDAGTNARITYSI 2684
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------------------I 54
P + ++A+D D D + I Y+I S N YF+ID I
Sbjct: 2351 PALHVSATDKDSDKNNVIHYQIFSDHNNTDYFHIDSSSGLILTARMLDHELVQKFDFVVI 2410
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+D P + V + V ++NDN P+ +Y A + E + + ASD D
Sbjct: 2411 ATDNGFPPLSSEVSVTVMVSDINDNPPVFNQLLYEAYVDELAPRGHFVTCVQASDADSSD 2470
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+++ Y I +GN + F +D +G
Sbjct: 2471 YEKLEYSILSGNEKLVFMLDKMTG 2494
>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Ovis aries]
Length = 2841
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 283 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGSGGSPSEVFEIDPR 342
Query: 56 SDL----------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
S + GP +++ V++ NDN P + Y Q+
Sbjct: 343 SGVIRTRGPVDREEVESYQLTVEASXPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVR 402
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 403 EDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 449
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 397 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 456
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 457 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 516
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 517 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 553
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 181 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 240
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLVEGSGGSPSEVFEIDPRSG 344
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 710 YTVNINEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 769
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 770 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 829
Query: 105 LAASDGDLDPDQRISYKISAGN 126
++A+D D + R+ Y GN
Sbjct: 830 ISATDRDSGLNGRVFYTFQGGN 851
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y GN + F ++ S
Sbjct: 813 YQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRL 872
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P + + V + V +VNDN P+ + + EN L
Sbjct: 873 DRENVAQYVLRAYAVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLA 932
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D + +I Y+I GN F +DI SG L
Sbjct: 933 VARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGEL 971
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 589 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 646
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 647 NRFSITSQSG 656
>gi|327261355|ref|XP_003215496.1| PREDICTED: protocadherin Fat 2-like [Anolis carolinensis]
Length = 1350
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP-- 62
Y + EN ++++ A DGD D I Y I G + F+I D G+ T GP
Sbjct: 1039 YEGSVEENSPEGTFVMRVTAQDGDKGKDGEIQYFIREGTGLAVFDIEKDSGTIFTTGPLD 1098
Query: 63 ----DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+L V Y++V +VNDN P PV+++ ++EN +
Sbjct: 1099 RESNPHYWLTVLAVDLGSVSLSSVVEIYVEVTDVNDNPPKLSRPVFHSSVMENSPANTSV 1158
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D D ++++ I GN + +F ++ +G
Sbjct: 1159 LQVEATDPDSDSQGKLTFHIINGNHQDFFAVNPETG 1194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----TG 60
PV+++ ++EN ++Q+ A+D D D ++++ I GN + +F ++ + L +
Sbjct: 1142 PVFHSSVMENSPANTSVLQVEATDPDSDSQGKLTFHIINGNHQDFFAVNPETGLIYTTSQ 1201
Query: 61 GPDQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVEN--QS 97
D+ Y + IQV +VNDN P + Q+ E
Sbjct: 1202 QLDREYKAEHILEVSVSDNGDPALKSTGRIVIQVTDVNDNAPSYSQKFFMVQLPEKTISE 1261
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
LP+ ++ A+D D P+ +++Y + N E +F I +G
Sbjct: 1262 TPLPVCRMIAADRDEGPNAQVTYSLEENN-EEFFTIQPMTG 1301
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I QL A D D + +I Y IS+GN +S F ID + L
Sbjct: 736 ITQLTARDNDTGFNGKIVYVISSGNEDSCFYIDTETGLLLVSSLFDHERTSFYVLNITVY 795
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + + + NDN P+ L VY I E+ ++ + A D D + +
Sbjct: 796 DLGTPQKSSWKLLAVNILDANDNAPVFLQSVYLVTIPEDIKIGATVIVVKAEDADTNDNG 855
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y A P F I+ +G +
Sbjct: 856 RVKYSFLA--PTDKFAINSVTGEV 877
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ ++++ + + +G P + VY+ + N+NDN P+ I + S P++
Sbjct: 529 QRWYHLRVWASDSGSPFRHQTEVYVSLILNNLNDNAPVFEKINCNGSIPWDLSVGHPVIT 588
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++A D +D QRI Y+I +GN + F +D SG
Sbjct: 589 VSAID--VDELQRIKYEIISGNEKQLFELDSVSG 620
>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
paniscus]
Length = 3150
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 515 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 574
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 575 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 634
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 635 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 685
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 633 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 692
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 693 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 752
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 753 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 789
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 413 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 472
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 473 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 532
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 533 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 576
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 1094 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 1137
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 1138 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 1197
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1198 FQLDIFSGEL 1207
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 946 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 1005
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 1006 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 1065
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 1066 ISATDRDSGLNGRVFY 1081
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 825 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 882
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 883 NRFSITSQSG 892
>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
Length = 2919
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 283 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 342
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP +++ V++ NDN P + Y
Sbjct: 343 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYV 402
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ S P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 403 VQVREDVSPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 453
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ S P++++ ASD D + + Y I +GN F +D
Sbjct: 401 YVVQVREDVSPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 557
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 181 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 240
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 344
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 862 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMDVT 905
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 906 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 965
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 966 FQLDIFSGEL 975
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 714 YTVNINEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 773
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 774 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 833
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 834 ISATDRDSGLNGRVFY 849
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 593 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 650
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 651 NRFSITSQSG 660
>gi|114050895|ref|NP_059088.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 1 precursor
[Mus musculus]
gi|148670020|gb|EDL01967.1| cadherin EGF LAG seven-pass G-type receptor 2 [Mus musculus]
gi|225356528|gb|AAI56537.1| Cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [synthetic construct]
Length = 2919
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ + G+P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP IV++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 560
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 865 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 908
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 909 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 968
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 969 FQLDIFSGEL 978
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGVVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ + G+P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSG 347
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 776
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 777 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 836
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 837 ISATDRDSGLNGRVFY 852
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 596 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 653
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 654 NRFSITSQSG 663
>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
Length = 4375
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ + EN ++ + A D D D + Y G S F+I D G+ T GP
Sbjct: 1038 VFKGWVQENSPEGTSVMMVTAKDIDKGKDGEVQYFFREGTGLSVFSIEKDTGTIRTTGPL 1097
Query: 63 -----DQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+L V YI+V + NDN P PV+Y ++EN
Sbjct: 1098 DREGTSHYWLTVLALDLGTIPLSSVTEIYIEVTDTNDNPPQMSRPVFYTSVMENSPPNTS 1157
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++QL A D D + ++++ I GNP+ F I++ +G
Sbjct: 1158 VLQLDALDPDSSSEGKLTFHILTGNPQGLFTINLITG 1194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
PV+Y ++EN ++QL A D D + ++++ I GNP+ F I++ + L
Sbjct: 1142 PVFYTSVMENSPPNTSVLQLDALDPDSSSEGKLTFHILTGNPQGLFTINLITGLISTTSR 1201
Query: 63 --DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ Y V IQV + ND+ P ++ Q+ E +
Sbjct: 1202 QLDREYKAEHILEVAVSDNGEPALKSTSRVVIQVLDANDSPPTFPHKLFMVQLPERDASE 1261
Query: 100 --LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
LP+ +L ASD D + I+Y I + E F I+ +G
Sbjct: 1262 TPLPVYRLIASDRDQGQNSHITYTIEEED-EGIFTINPTTG 1301
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V ++V++VNDN P+ +Y A + E+ P+VQL ASD D ++ +SY+I +
Sbjct: 2259 VEVEVEDVNDNPPVFSQMIYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQILDDGSD 2318
Query: 127 PESYFNIDIGSGSL 140
+FNID +G +
Sbjct: 2319 ATKFFNIDGSTGQI 2332
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNID---------- 53
+Y A + E+ P+VQL ASD D ++ +SY+I + +FNID
Sbjct: 2277 IYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQILDDGSDATKFFNIDGSTGQITTAQ 2336
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+D P +V + V ++NDN P Y A++ E +
Sbjct: 2337 ALDYERNQQFRMKVRATDHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATCG 2396
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN +F I+ SG
Sbjct: 2397 HIVIKVQALDPDSGDTTRLEYVILSGNDNRHFTINSTSG 2435
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ ID+ + + ++ +V I VQ+VNDN P+ Y A ++EN ++Q+
Sbjct: 2762 KWYQIDVMAHCSHQETELVSLVSVNIHVQDVNDNRPVFEADPYKAFVMENMPSGTTVIQV 2821
Query: 106 AASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
A+D D D +++Y + A GN F ID SG
Sbjct: 2822 TANDQDTGNDGQVTYSLEAESGNLRGLFTIDGESG 2856
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 36/164 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y +I E+ + P++Q++A+ L P +SY+I GN + F+++ S L
Sbjct: 1666 YITEISESIAVGSPLIQVSATS--LSP---VSYEIKDGNGDGVFSMNYQSGLISTQKSLD 1720
Query: 63 -DQVYL-----------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL- 100
+QV IV I V + NDN P+ + P + I+EN QS +L
Sbjct: 1721 FEQVSFYQLKVRGTNMAGAFTDTIVLIYVIDENDNAPIFVKPSFVGWIMENAPSQSMVLD 1780
Query: 101 ----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V A+D D D + + Y+I YF +D +G+L
Sbjct: 1781 ESNAPLVT-HATDADQDSNALLVYEILETEALKYFTVDPSTGTL 1823
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I L+A D D + ++ Y IS GN +S F ID+ L
Sbjct: 736 IADLSAVDPDTGFNGKLVYVISDGNDDSCFTIDLELGLLQVLSPLDHERTSFYILNITVY 795
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V + NDN P Y+ I E+ + I QL A D D D +
Sbjct: 796 DLGTPQKSSWKLLAVNVLDTNDNTPKFPQGAYWVAIPEHVATGTTIAQLKAEDADTDDNG 855
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F I+ +G +
Sbjct: 856 RVKYSLLS--PTDKFAINSVTGEV 877
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLTG 60
L P Y A + E+ + ++ L+A D + I Y+I GN F N + G+
Sbjct: 3220 LAPEYMAMVKEDVAVGTEVLNLSALTRDNAENTEIKYEIVNGNDHGKFQLNSNTGALYIN 3279
Query: 61 GP------DQVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G + YL +V I + ++ND+ P + Y+A I E+ +
Sbjct: 3280 GSLDFEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAV 3339
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ ++A D D + +I+Y I GNP +F I SG +
Sbjct: 3340 GEIILTVSADDLDGAMNNQITYSIVEGNPLGHFAIQPKSGQI 3381
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKIS----------------------AGNPES 48
+ +N + PI +AA D D P+ + Y +S + S
Sbjct: 3123 VFDNTTTKTPIAVVAARDLDEGPNAEVVYSLSDSANGHFSIEETTGVIRLEKPLKDSQHS 3182
Query: 49 YFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
F + + + G P+ + + V + V ++N+ +P+ L P Y A + E+ + ++ L+
Sbjct: 3183 AFELTVRATDRGTPEPLSALGTVTVSVVDLNEYLPVFLAPEYMAMVKEDVAVGTEVLNLS 3242
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D + I Y+I GN F ++ +G+L
Sbjct: 3243 ALTRDNAENTEIKYEIVNGNDHGKFQLNSNTGAL 3276
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V N N + P Y A+++++ I+Q+ A D D + I Y + AG
Sbjct: 1539 FVRVIIHVDNCNLHPPQFSSIHYEAEVLDSAVVGTEIMQVRALDQDQGANAEIHYSLQAG 1598
Query: 126 NPESYFNIDIGSG 138
N E +F+ID+ SG
Sbjct: 1599 NGEGFFSIDLYSG 1611
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--------- 57
Y A+++++ I+Q+ A D D + I Y + AGN E +F+ID+ S
Sbjct: 1561 YEAEVLDSAVVGTEIMQVRALDQDQGANAEIHYSLQAGNGEGFFSIDLYSGIITVAQKLD 1620
Query: 58 ---------LTGGPDQVY------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ DQ + V+++++ + P + Y +I E+ + P+
Sbjct: 1621 PSRQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDRTPPKFPEAEYITEISESIAVGSPL 1680
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q++A+ L P +SY+I GN + F+++ SG
Sbjct: 1681 IQVSAT--SLSP---VSYEIKDGNGDGVFSMNYQSG 1711
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A++ E + ++++ A D D R+ Y I +GN +F I+ S +
Sbjct: 2385 YEAKVSEMATCGHIVIKVQALDPDSGDTTRLEYVILSGNDNRHFTINSTSGIISMFNRCK 2444
Query: 59 ----------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
D V+ + VYI N N P VY A++ EN +++L
Sbjct: 2445 KDLESFYNLRVSASDGVFKSTVPVYINTTNANKYSPSFRQNVYEAELAENAEIGTKVIEL 2504
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNID 134
A D D P I Y I F+ID
Sbjct: 2505 LAIDPDGGPYGTIDYTIINKLAHEKFSID 2533
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGS 56
DP Y+A I E+ + I+ ++A D D + +I+Y I GNP +F I I
Sbjct: 3327 DP-YFADIREDAAVGEIILTVSADDLDGAMNNQITYSIVEGNPLGHFAIQPKSGQISIAK 3385
Query: 57 DL----------------TGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L G P Q + ++I V +VNDN P Y + EN
Sbjct: 3386 HLDREEIPSYSLTVRATDNGHPAQFSDVALHIHVSDVNDNPPRFFQLNYSVVVQENAPVG 3445
Query: 100 LPIVQLAASDGDLDPDQR--ISYKISAGNPESYFNI 133
+++L SD D P+ S++I+ GN F++
Sbjct: 3446 TSVLELIMSDRDT-PENGPPYSFQITQGNDGKAFDV 3480
>gi|114050897|ref|NP_001004177.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 precursor
[Mus musculus]
Length = 2917
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ + G+P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP IV++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 560
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 865 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 908
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 909 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 968
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 969 FQLDIFSGEL 978
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGVVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ + G+P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSG 347
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 776
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 777 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 836
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 837 ISATDRDSGLNGRVFY 852
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 596 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 653
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 654 NRFSITSQSG 663
>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Loxodonta africana]
Length = 2928
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ GNP F ID
Sbjct: 287 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGNPSEVFEIDPR 346
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 347 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 406
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 407 VQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 457
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 405 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +Q+ ++NDN P+ + + A ++E+
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQILDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F+I+ G+G
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTG 561
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID--IGSDLT 59
P Y A + ENQ P+ L A D D R+ Y + A +F++D G+ T
Sbjct: 185 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPVTGAVTT 244
Query: 60 ---------------------GGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + L + I V + ND+ P+ Y + EN
Sbjct: 245 AEELDRETKSTHVFRVTVQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 304
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ GNP F ID SG
Sbjct: 305 VGYEVLTVRATDGDAPPNANILYRLLEGPGGNPSEVFEIDPRSG 348
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYTLRA------YAVDKGMP----PARTPMEVM 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 718 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 777
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 778 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 837
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 838 ISATDRDSGLNGRVFY 853
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 597 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 654
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 655 NRFSITSQSG 664
>gi|351708750|gb|EHB11669.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Heterocephalus
glaber]
Length = 2976
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 347 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 406
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 407 SGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 466
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 467 VQVREDVAPGAPVLRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 517
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 465 YVVQVREDVAPGAPVLRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 524
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 525 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 584
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 585 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 621
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 926 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 969
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 970 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 1029
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1030 FQLDIFSGEL 1039
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 245 PSYQATVPENQPVGTSVASLRAIDTDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 304
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 305 AEELDRETKSTHVFRVTAQDHGVPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 364
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 365 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 408
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 778 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 837
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 838 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 897
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 898 ISATDRDSGLNGRVFY 913
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 657 VSVTIVDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 714
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 715 NRFSITSQSG 724
>gi|119576776|gb|EAW56372.1| cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 2924
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 287 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 346
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 347 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 406
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 407 VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGAL 457
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 405 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 561
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 185 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 244
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 245 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 304
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 305 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 348
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 718 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 777
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 778 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 837
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 838 ISATDRDSGLNGRVFY 853
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 597 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 654
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 655 NRFSITSQSG 664
>gi|13325064|ref|NP_001399.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Homo
sapiens]
gi|22095550|sp|Q9HCU4.1|CELR2_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Cadherin family member 10; AltName:
Full=Epidermal growth factor-like protein 2;
Short=EGF-like protein 2; AltName: Full=Flamingo homolog
3; AltName: Full=Multiple epidermal growth factor-like
domains protein 3; Short=Multiple EGF-like domains
protein 3; Flags: Precursor
gi|9828190|gb|AAG00080.1|AF234887_1 FLAMINGO 1 [Homo sapiens]
gi|21929188|dbj|BAC06168.1| seven transmembrane helix receptor [Homo sapiens]
Length = 2923
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGAL 456
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 464 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 524 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 560
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 347
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 865 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 908
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 909 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 968
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 969 FQLDIFSGEL 978
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 776
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 777 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 836
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 837 ISATDRDSGLNGRVFY 852
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 596 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 653
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 654 NRFSITSQSG 663
>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Cavia porcellus]
Length = 2925
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G P F ID
Sbjct: 289 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGGPSEVFEIDPR 348
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 349 SGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRGATAAVFLSVEDDNDNAPQFSEKRYI 408
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + PI+++ ASD D + + Y I +GN F +D +G+L
Sbjct: 409 VQVREDVAPGAPILRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 459
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + PI+++ ASD D + + Y I +GN F +D
Sbjct: 407 YIVQVREDVAPGAPILRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 466
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 467 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 526
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 527 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 563
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 868 IVESTSGIVRTLR------RLDRENVAQYSLRA------YAVDKGMP----PARTSMEVT 911
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 912 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 971
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 972 FQLDIFSGEL 981
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 720 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 779
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 780 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 839
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 840 ISATDRDSGLNGRVFY 855
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F +D
Sbjct: 187 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFFLDPVTGVVTT 246
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 247 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 306
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G P F ID SG
Sbjct: 307 VGYEVLTVRATDGDAPPNANILYRLLEGSGGGPSEVFEIDPRSG 350
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 599 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 656
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 657 NRFSITSQSG 666
>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
abelii]
Length = 2958
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 321 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 380
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 381 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 440
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 441 VQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 491
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 439 YVVQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 498
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 499 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 558
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 559 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 595
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 219 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTT 278
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 279 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 338
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 339 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 382
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 900 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 943
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 944 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 1003
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1004 FQLDIFSGEL 1013
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 752 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 811
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 812 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 871
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 872 ISATDRDSGLNGRVFY 887
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 631 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 688
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 689 NRFSITSQSG 698
>gi|71891737|dbj|BAA13407.2| KIAA0279 protein [Homo sapiens]
Length = 2854
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 217 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 276
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 277 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 336
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 337 VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGAL 387
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 335 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 394
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 395 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 454
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 455 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 491
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 115 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 174
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 175 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 234
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 235 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 278
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 796 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 839
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 840 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 899
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 900 FQLDIFSGEL 909
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 648 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 707
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 708 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 767
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 768 ISATDRDSGLNGRVFY 783
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 527 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 584
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 585 NRFSITSQSG 594
>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
[Gorilla gorilla gorilla]
Length = 2911
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 274 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 333
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 334 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 393
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 394 VQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 444
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 392 YVVQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 451
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 452 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 511
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 512 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 548
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 172 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTT 231
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 232 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 291
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 292 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 335
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 853 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 896
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 897 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 956
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 957 FQLDIFSGEL 966
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 705 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 764
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 765 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 824
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 825 ISATDRDSGLNGRVFY 840
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 584 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 641
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 642 NRFSITSQSG 651
>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
Length = 3365
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y + EN + +V+L +D D+ + +SY I+ GN + F++ +
Sbjct: 1005 IYNVSLPENVARDFKVVRLNCTDADVGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSL 1064
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
TG VY+ V +VNDN P+ L Y A + E+
Sbjct: 1065 DRETVASYALILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPIFLQSSYEASVPEDIPAA 1124
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQ+ A+D D + R+ Y+I GN + F I+ SG L
Sbjct: 1125 SSIVQVKATDADEGVNGRVWYRIVKGNEHNNFRINPSSGLL 1165
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y + EN + ++Q+ A+D D+ ++SY S + D G L
Sbjct: 470 LYNVSLPENATVGTTVLQVHATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVILLMARLDF 529
Query: 60 --------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
GG ++ + I V +VNDNVP Y + EN+ + +V+L
Sbjct: 530 ETMQRYTLTVIARDGGGEETAGRIRINVLDVNDNVPTFQKEAYLGALRENEPSVTQVVRL 589
Query: 106 AASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
ASD D P+ +I+Y I A YF+I + G
Sbjct: 590 RASDEDSPPNNQITYSIVHASAFREYFDITVSEG 623
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
+ A+I E + Q+ A D D P+ ++Y++ G P F I+ S L
Sbjct: 901 FIAEISEGLPAGTSVFQVLAIDLDEGPNGWVTYRMQVGMPRMDFLINSTSGLIISTTVLD 960
Query: 59 ---------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P + + ++V +VND P +Y + EN + +
Sbjct: 961 RERITEYYLRVVASDAGTPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFKV 1020
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V+L +D D+ + +SY I+ GN + F++ G
Sbjct: 1021 VRLNCTDADVGLNAELSYFITGGNQDGKFSVGFRDG 1056
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES-------------------------YFNIDIG 55
I A DGD P ++ Y I AG+P ++N+ I
Sbjct: 1769 IWTFLAHDGDSGPGGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNLTIS 1828
Query: 56 SDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ G P ++V ++V ++NDN P+ L+ + E+ + ++ A D D P
Sbjct: 1829 ARDRGVPPLSSTMLVGVRVLDINDNDPVLLNLPMNITLSEHAPVSSFVTRILAQDADQGP 1888
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +++ I+AGN ES F I+ +G
Sbjct: 1889 NALLTFDITAGNKESAFYINSTTG 1912
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 28/144 (19%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------------ 61
A D D + ++++ ++AGN F I +D G
Sbjct: 1449 ARDPDAGSNGQVTFSLTAGNVGQAFEIRTTNDTYGEVLVARPLDRELLDHYTLRIQASDG 1508
Query: 62 ---PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P + + + V +VNDN P+ P+ Y + EN G +VQ+ A+D D +
Sbjct: 1509 GVPPRRKEHTLRVTVLDVNDNPPIIDSPLGYNVSVSENVGGGTAVVQVRATDRDAGLNSV 1568
Query: 118 ISYKISAGNPESYFNIDIGSGSLG 141
+SY I+ GN + F +D +G +
Sbjct: 1569 LSYYITHGNEDLTFRMDRVTGEIA 1592
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGPD-- 63
Y + EN G +VQ+ A+D D + +SY I+ GN + F +D + ++ P
Sbjct: 1539 YNVSVSENVGGGTAVVQVRATDRDAGLNSVLSYYITHGNEDLTFRMDRVTGEIATRPSPP 1598
Query: 64 -----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + V++ + + NDN P+ +Y + E + +
Sbjct: 1599 DRERQSSYCLLVTVEDEGTPSLSATTKVFVTILDENDNAPVFQQQLYEVTLDEGPATLNA 1658
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D D P+ ++Y I+ GN F I+ +G +
Sbjct: 1659 TLVTVQALDRDEGPNSTVTYAITEGNILGTFYINSTTGQI 1698
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L ASD D P+ +I+Y I A YF+I +
Sbjct: 572 YLGALRENEPSVTQVVRLRASDEDSPPNNQITYSIVHASAFREYFDITVSEGYGVISVNH 631
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y ++E+
Sbjct: 632 PLDYEQVVNGVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIM 691
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S+F I+ SG +
Sbjct: 692 AGATVLFLNATDLDRSREYGQESIIYSLEGSSHFRINARSGEI 734
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 31/141 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLT 59
+ ++ A D D P+ +++ I+AGN ES F I+ + +
Sbjct: 1876 VTRILAQDADQGPNALLTFDITAGNKESAFYINSTTGIIYVNRPLDREQVAEYRLTITVK 1935
Query: 60 GGPDQV------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P+ + + ++ I + + NDN P+ Y A+++EN P+ L LD
Sbjct: 1936 DNPENIRNARRDFDLLVISIADENDNHPLFTQSSYQAEVMENSPAGTPVTMLNGPILALD 1995
Query: 114 PDQR----ISYKISAGNPESY 130
DQ ++Y++ +P+ +
Sbjct: 1996 SDQGSNAVVTYQLLGTSPDLF 2016
>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
Length = 2920
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 283 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPR 342
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP +++ V++ NDN P + Y
Sbjct: 343 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYV 402
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 403 VQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 453
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 401 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 557
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 181 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 240
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSG 344
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 862 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMDVT 905
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 906 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 965
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 966 FQLDIFSGEL 975
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 714 YTVNINEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 773
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 774 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 833
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 834 ISATDRDSGLNGRVFY 849
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 593 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 650
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 651 NRFSITSQSG 660
>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
taurus]
Length = 2920
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 283 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPR 342
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP +++ V++ NDN P + Y
Sbjct: 343 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYV 402
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 403 VQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 453
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 401 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 557
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 181 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 240
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSG 344
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 862 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMDVT 905
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 906 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 965
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 966 FQLDIFSGEL 975
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 714 YTVNINEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 773
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 774 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 833
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 834 ISATDRDSGLNGRVFY 849
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 593 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 650
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 651 NRFSITSQSG 660
>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
norvegicus]
gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
Length = 2919
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP +V++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAVVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 VLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTG 560
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 865 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 908
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 909 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 968
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 969 FQLDIFSGEL 978
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 776
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 777 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 836
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 837 ISATDRDSGLNGRVFY 852
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSG 347
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 596 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 653
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 654 NRFSITSQSG 663
>gi|224067665|ref|XP_002195148.1| PREDICTED: protocadherin Fat 2 [Taeniopygia guttata]
Length = 4428
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSD 57
++ + EN ++ + A D D D + Y + G S F+I+ IGS
Sbjct: 1038 IFKGWVQENSPKGTSVMMVTAKDIDRGKDGEVQYFLREGTGLSVFHIEKDTGTIRTIGSL 1097
Query: 58 LTGGPDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G +L V YI+V + NDN P PV+YA ++EN
Sbjct: 1098 DREGTSHYWLTVLALDLGTIPLSSVTEIYIEVTDTNDNPPQMSRPVFYASVMENSPPNTS 1157
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++QL A D D + ++++ I GN + F I++ +G
Sbjct: 1158 VLQLDAFDPDSSSEGKLTFHILTGNLQGLFTINLSTG 1194
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 27/145 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
PV+YA ++EN ++QL A D D + ++++ I GN + F I++ + L
Sbjct: 1142 PVFYASVMENSPPNTSVLQLDAFDPDSSSEGKLTFHILTGNLQGLFTINLSTGLISTTSR 1201
Query: 63 --DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ Y V IQV + ND+ P ++ Q+ E ++
Sbjct: 1202 QLDREYKAEHILEVAVSDNGEPALKSSSRVVIQVLDANDSPPSFPHKLFMVQLPEREASE 1261
Query: 100 --LPIVQLAASDGDLDPDQRISYKI 122
LP+ +L ASD D + +I+Y I
Sbjct: 1262 TPLPVYRLIASDRDQGQNSQITYTI 1286
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V ++V+++NDN P+ +Y A + E+ P+VQL ASD D ++ +SY+I +
Sbjct: 2261 VEVEVEDINDNPPIFSQIIYTASVSESLPPQTPVVQLFASDKDSGRNKVVSYQIMDDGSD 2320
Query: 127 PESYFNIDIGSGSL 140
+FNID +G +
Sbjct: 2321 AAKFFNIDASTGHI 2334
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I L+A+D D ++ Y IS GN +S F ID+ L
Sbjct: 736 IADLSATDPDTGFSGKLVYVISDGNDDSCFTIDLERGLLQVLSPLDHEQTSFYILNITVY 795
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V + NDN P Y+ I E+ + I QL A D D D +
Sbjct: 796 DLGTPQKSSWKLLAVNVLDTNDNTPKFTQASYWVAIPEHVAAGTTIAQLKAEDADTDDNG 855
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + P F I+ +G +
Sbjct: 856 RVKYSLLT--PTDKFAINSVTGEV 877
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDI--------- 54
+Y A + E+ P+VQL ASD D ++ +SY+I + +FNID
Sbjct: 2279 IYTASVSESLPPQTPVVQLFASDKDSGRNKVVSYQIMDDGSDAAKFFNIDASTGHITTAQ 2338
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+D P +V + V ++NDN P Y A++ E +
Sbjct: 2339 ALDYETNQQFRMKVRAADHGVPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATCG 2398
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN +F I+ SG
Sbjct: 2399 HIVIKVQALDPDSGDTTRLEYVILSGNDNRHFAINSTSG 2437
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 36/168 (21%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L+ Y +I E+ + P++Q++A+ L P +SY+I GN + F+++ S L
Sbjct: 1664 LEAEYITEISESTAIGSPLIQVSATS--LSP---VSYEIKDGNGDGVFSMNYQSGLISTQ 1718
Query: 63 -----DQVYL-----------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN---QS 97
+QV +V I V + NDNVP+ + P + I+EN QS
Sbjct: 1719 KNLDFEQVSFYQLKVRGTNMAGAFMDAVVLIYVIDENDNVPVFVKPSFVGWIMENAPAQS 1778
Query: 98 GIL-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+L P+V A+D D D + + Y+I YF +D +G+L
Sbjct: 1779 MVLDESNAPLVTY-ATDADQDSNALLIYEILEPEALKYFTVDPSTGTL 1825
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GN 126
V IQVQ+VNDN P+ Y A ++EN ++Q+ A+D D +++Y + A GN
Sbjct: 2787 VNIQVQDVNDNRPVFEADPYRAFVMENMPSGTTVIQVTANDQDTGSAGQVTYSLEAESGN 2846
Query: 127 PESYFNIDIGSG 138
F ID SG
Sbjct: 2847 LRGLFTIDGESG 2858
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y A+++++ ++Q+ A D D + I Y + AGN E +F+ID + L
Sbjct: 1563 YEAEVLDSAVVGTEVIQVRALDQDQGANAEIRYSLQAGNGEGFFSIDPYSGIVTVAQKLD 1622
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + + V++ ++ + P L+ Y +I E+ + P+
Sbjct: 1623 PSRQERFTLIVKAEDQGFPQLKDSATVHVHIRPSDRTPPKFLEAEYITEISESTAIGSPL 1682
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q++A+ L P +SY+I GN + F+++ SG
Sbjct: 1683 IQVSAT--SLSP---VSYEIKDGNGDGVFSMNYQSG 1713
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A++ E + ++++ A D D R+ Y I +GN +F I+ S +
Sbjct: 2387 YEAKVSEMATCGHIVIKVQALDPDSGDTTRLEYVILSGNDNRHFAINSTSGIISMFNRCK 2446
Query: 59 ----------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
D V+ + VYI N N P VY A++ EN +++L
Sbjct: 2447 KDLEPSYNLRVSASDGVFKSTVPVYINTTNANKYSPTFQQNVYEAELAENAEIGTKVIEL 2506
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNID 134
A D D P I Y I F+ID
Sbjct: 2507 LAIDPDGGPYGTIDYTIINKLAHEKFSID 2535
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L P Y A + E+ + ++ L+ D + I Y+I GN F ++ + +
Sbjct: 3222 LAPEYVAMVKEDVAVGTEVLNLSVLTRDNAENNEIKYEIVNGNDHGKFQLNPNTGALYIN 3281
Query: 60 GGPD-----QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D + YL +V I + ++ND+ P + Y+ I E+ +
Sbjct: 3282 GSLDFEVSHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFTDIREDAAI 3341
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ ++A D D + +I+Y I GNP +F I +G +
Sbjct: 3342 GEIILTVSADDLDGSMNNQITYSIVEGNPLGHFAIQPKNGQI 3383
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V + V + N + P Y A+++++ ++Q+ A D D + I Y + AG
Sbjct: 1541 FVRVIVHVDSCNLHPPQFSSIHYEAEVLDSAVVGTEVIQVRALDQDQGANAEIRYSLQAG 1600
Query: 126 NPESYFNIDIGSG 138
N E +F+ID SG
Sbjct: 1601 NGEGFFSIDPYSG 1613
>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
Length = 4039
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNID---------- 53
Y ++ENQS ++ + A D D + + Y+ Y F +D
Sbjct: 596 YNVTVLENQSAPREVITVTAQDDDQGSNGEVYYEFDTETANRYSGSFRLDSNTGRIDTLV 655
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD P Q + V + V ++NDN P+ YYA I ENQ
Sbjct: 656 TFDRETTDLYSLVVRASDRGNPPQQSAVRVNVIVGDLNDNNPVFYPVRYYASIRENQPSG 715
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+VQ++ASD D + R++Y+I+ GNP+ F I SG +
Sbjct: 716 TSVVQVSASDLDAGLNGRVTYQITRGNPDGKFTISPQSGQI 756
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
Y I EN +V+++ASD D + + Y I+ GN E F ID S
Sbjct: 1224 TYQVSISENAQRSQQVVRVSASDMDYGNNALVRYTITEGNDEGKFLIDSSSGQIMLAQLL 1283
Query: 57 ----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ P V I V + NDN P+ + A ++E+
Sbjct: 1284 DREVEDFYSLLVDVRDSASENPLSSQCRVNISVLDENDNEPVFSPTLQTADVLESTRVND 1343
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I L A+DGD + I+Y IS GN F +D +G L
Sbjct: 1344 LITTLTATDGDAGSNGEITYSISEGNAHGTFTLDSYTGKL 1383
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 27/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID----------- 53
+Y + E + ++ ++A D DL D R Y I GN S F+I+
Sbjct: 3374 LYEGHVSEGDNVGTSVLTVSAIDNDLRADFRSFVYGIQDGNEGSAFSINQISGIISTASR 3433
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D P V + + ++NDN P + P ++EN++
Sbjct: 3434 LDRETIDTYNLTVTATDTGIPPATGTTYVVVNIDDINDNGPEFIPPNVTGYVLENRAPTT 3493
Query: 101 PIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DLDP++ SY++ G+ YF +D GSG L
Sbjct: 3494 -VMTLSATDPDLDPNRGPFSYRLIGGHNSQYFTLDQGSGRL 3533
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Q + I V+++NDNVP Y I EN +V+++ASD D + + Y
Sbjct: 1199 PLQDRATLQITVRDINDNVPRFAQDTYQVSISENAQRSQQVVRVSASDMDYGNNALVRYT 1258
Query: 122 ISAGNPESYFNIDIGSGSL 140
I+ GN E F ID SG +
Sbjct: 1259 ITEGNDEGKFLIDSSSGQI 1277
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
++I+ + + +VNDN PM DP Y I EN +V + A+D D + I Y+I+
Sbjct: 3142 FVILTVDLTDVNDNDPM-FDPATYDPSIPENSPSGTSVVMVTATDADTGANAAIRYQITG 3200
Query: 125 GNPESYFNIDIGSGSL 140
G+ + F ID +G +
Sbjct: 3201 GDGQDLFIIDAVTGEI 3216
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT- 59
DP Y I EN +V + A+D D + I Y+I+ G+ + F ID + ++T
Sbjct: 3159 FDPATYDPSIPENSPSGTSVVMVTATDADTGANAAIRYQITGGDGQDLFIIDAVTGEITS 3218
Query: 60 -GGPD----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GG D Q+Y + V I + N+ P+ L +Y +I E+
Sbjct: 3219 QGGLDYERKQMYTLQVTATNVEASSRFGTCTVNIHLTGQNEYAPVFLQRLYTFEISESAE 3278
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D PD ++Y + + + F I + SG++
Sbjct: 3279 TGTTVGTVYATDRDDGPDGIVNYILVGSSNDKGFAIGLESGAI 3321
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLIV 69
+ N SG + L ++ +LD + R SY++ +I + G P + YL+V
Sbjct: 207 VTTNPSGEASFLHLQ-TNQNLDREIRSSYQL-----------NISAQDGGSPPRYGYLLV 254
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V++ NDN P+ Y + E+ ++ + A+D D + I+Y + +G P +
Sbjct: 255 NISVRDSNDNPPIFDQSEYIVSLNESAPIGTSVLTVRATDIDEGTNAEITYLLDSGEPAT 314
Query: 130 YFNIDIGSG 138
F ID +G
Sbjct: 315 KFQIDPRTG 323
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P L + + V++VND+ P+ Y I E+Q + A+D D + ISY
Sbjct: 986 PQSATLTLTVTVRDVNDHAPVFSSSSYSTAIPESQPVNDQFFSVTATDEDAGLNGLISYS 1045
Query: 122 ISAGNPESYFNI 133
I+ GNP F +
Sbjct: 1046 ITGGNPGDRFGV 1057
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SA 124
Y + I + +VNDN P+ Y + EN+ + ++ ++ASD D + Y++ +A
Sbjct: 2608 YHRLTIALADVNDNPPIFSQDPYVGSVGENEGTLTSVLTVSASDADSGSNGEFEYRLRAA 2667
Query: 125 GNPESYFNIDIGSGSL 140
GN ++ F ++ +G +
Sbjct: 2668 GNLDNSFQVNPNTGQV 2683
>gi|347543901|gb|AEP02523.1| CDH23, partial [Aselliscus stoliczkanus]
Length = 3138
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDIGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1048
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D ++ V+I V +VNDN P+ L Y A + E+
Sbjct: 1049 DRETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEG 1108
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN +YF ID+ SG L
Sbjct: 1109 HSIVQLTATDADEGEFGRVWYRILQGNFGNYFEIDVDSGLL 1149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN +YF ID+ S L
Sbjct: 1097 YEASVPEDIPEGHSIVQLTATDADEGEFGRVWYRILQGNFGNYFEIDVDSGLLMRGPRPL 1156
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1157 DREQDASHVLTVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1216
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D P ++Y+I +G E F ID +G
Sbjct: 1217 SVLVVRATDRDTGPGGLVTYRILSG-AEGKFEIDESTG 1253
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 528 GGGEETTGRVRINVLDVNDNVPTFQKDAYMGALRENEPSVTQLVRLRATDEDSPPNNLIT 587
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y I A + SYF+I + G
Sbjct: 588 YSIIFASSFGSYFDISVYEG 607
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A+D D + +SY++ G P F I+
Sbjct: 885 FVAEVLEGTPAGVSVYQVVATDLDEGLNGLVSYRMQVGMPRLDFLINSSSGVVVTTTELD 944
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 945 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPVVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1005 VWLNCTDNDIGLNAELSYFITAGNVDGKFSV 1035
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1743 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDR 1801
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1802 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVA 1861
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + +++ I+AGN E F I+ +G
Sbjct: 1862 HILASDADSGCNALLTFNITAGNRERAFAINATTG 1896
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++T P
Sbjct: 1523 YNVSVNENVGGGTVVVQVKATDRDIGINSVLSYYITEGNDDMTFRMDRISGEITTRPAPP 1582
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E I
Sbjct: 1583 DREHQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPYYEILLDEGPDTINA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A D D P+ + Y I AGN F+ID +G
Sbjct: 1643 SLVTVQALDLDEGPNGTVVYSIIAGNIIDTFHIDKHTG 1680
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 29/134 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I A + SYF+I +
Sbjct: 556 YMGALRENEPSVTQLVRLRATDEDSPPNNLITYSIIFASSFGSYFDISVYEGYAVISVNH 615
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 616 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFNKPAYFVSVVENIM 675
Query: 98 GILPIVQLAASDGD 111
++ L A+D D
Sbjct: 676 AGATVLFLNATDLD 689
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 36/147 (24%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ + ASD D + +++ I+AGN E F I+ + +
Sbjct: 1860 VAHILASDADSGCNALLTFNITAGNRERAFAINATTGIVTVNRPLDRERIPQYRLTISVK 1919
Query: 60 --------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AA 107
D +L++++ +N DN P+ + Y+A+++EN PI L A
Sbjct: 1920 DNPENPRIARRDFDFLLIFLADEN--DNHPIFTESTYHAEVMENSPAGTPITVLNGPILA 1977
Query: 108 SDGDLDPDQRISYKISAGNPESYFNID 134
D DLD ++Y++ G F+ID
Sbjct: 1978 LDADLDVYAVVAYQL-LGAQSGLFDID 2003
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1488 VASDCGTPPRKKDRILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVKATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D SG +
Sbjct: 1548 GINSVLSYYITEGNDDMTFRMDRISGEI 1575
>gi|22095553|sp|Q9R0M0.2|CELR2_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Flamingo homolog; Flags: Precursor
Length = 2920
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G +P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP IV++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + NDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVND-NVPMTLDPVYYAQIVENQSGIL 100
I + G P V +V +QV ++ND P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGY 523
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 LVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 561
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 22/130 (16%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI 68
E++ +V ++A+D D + RI+Y + P+ + D G+ T DQV
Sbjct: 724 EDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYT 783
Query: 69 VYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
+ I V +VNDN P L Y + E+ ++Q+ A+D
Sbjct: 784 LAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILATDR 843
Query: 111 DLDPDQRISY 120
D + R+ Y
Sbjct: 844 DSGLNGRVFY 853
>gi|5832711|dbj|BAA84070.1| Flamingo 1 [Mus musculus]
Length = 2920
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G +P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP IV++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + NDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVND-NVPMTLDPVYYAQIVENQSGIL 100
I + G P V +V +QV ++ND P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGY 523
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 LVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 561
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 22/130 (16%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI 68
E++ +V ++A+D D + RI+Y + P+ + D G+ T DQV
Sbjct: 724 EDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYT 783
Query: 69 VYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
+ I V +VNDN P L Y + E+ ++Q+ A+D
Sbjct: 784 LAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILATDR 843
Query: 111 DLDPDQRISY 120
D + R+ Y
Sbjct: 844 DSGLNGRVFY 853
>gi|312078374|ref|XP_003141710.1| hypothetical protein LOAG_06126 [Loa loa]
Length = 2498
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
D Y + EN ++ L A D D P + Y + G+ S F ID
Sbjct: 864 DIAYETSVYENMPVWTEVLTLNAVDPD-SPGMPVKYTVIDGDGISSFTIDSEGILRTSAV 922
Query: 54 -----IGS--------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GS DL P L V+++V + ND++P++L P+Y++ I EN
Sbjct: 923 LDRETCGSYWLTIEACDLNPVPLTSVLHVFVRVLDRNDHIPLSLRPIYFSSIPENSPEDT 982
Query: 101 PIVQLAASDGDLDPDQR-----ISYKISAGNPESYFNIDIGSG 138
I+++ A D D D R + +KI +GNP+S+F ID +G
Sbjct: 983 VIIKVEAEDKD-DLSNRYGITNVHFKIISGNPQSFFAIDSKTG 1024
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-----ISYKISAGNPESYFNID 53
++L P+Y++ I EN I+++ A D D D R + +KI +GNP+S+F ID
Sbjct: 964 LSLRPIYFSSIPENSPEDTVIIKVEAEDKD-DLSNRYGITNVHFKIISGNPQSFFAID 1020
>gi|410033344|ref|XP_003308299.2| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Pan troglodytes]
Length = 2887
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 264 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 323
Query: 56 SDL--TGGP----------------DQ--------VYLIVYIQVQNVNDNVPMTLDPVYY 89
S + T GP DQ V++ V++ NDN P + Y
Sbjct: 324 SGVIRTRGPVDREEVESYQLTVEASDQGRDPSPRSTTAAVFLSVEDDNDNAPQFSEKRYV 383
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 384 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 434
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 382 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 441
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 442 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 501
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 502 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 538
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 162 PRYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 221
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 222 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 281
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 282 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 325
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 843 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 886
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPES 129
+ V +VNDN P+ + + VE+ S I L + ++ A+D D + +I Y+I GN
Sbjct: 887 VTVLDVNDNPPV-FEQDEFDVFVEHNSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPE 945
Query: 130 YFNIDIGSGSL 140
F +DI SG L
Sbjct: 946 VFQLDIFSGEL 956
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 695 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 754
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 755 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 814
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 815 ISATDRDSGLNGRVFY 830
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 574 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 631
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 632 NRFSITSQSG 641
>gi|393908503|gb|EJD75084.1| cadherin domain-containing protein [Loa loa]
Length = 4394
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
D Y + EN ++ L A D D P + Y + G+ S F ID
Sbjct: 864 DIAYETSVYENMPVWTEVLTLNAVDPD-SPGMPVKYTVIDGDGISSFTIDSEGILRTSAV 922
Query: 54 -----IGS--------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GS DL P L V+++V + ND++P++L P+Y++ I EN
Sbjct: 923 LDRETCGSYWLTIEACDLNPVPLTSVLHVFVRVLDRNDHIPLSLRPIYFSSIPENSPEDT 982
Query: 101 PIVQLAASDGDLDPDQR-----ISYKISAGNPESYFNIDIGSG 138
I+++ A D D D R + +KI +GNP+S+F ID +G
Sbjct: 983 VIIKVEAEDKD-DLSNRYGITNVHFKIISGNPQSFFAIDSKTG 1024
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-----ISYKISAGNPESYFNID 53
++L P+Y++ I EN I+++ A D D D R + +KI +GNP+S+F ID
Sbjct: 964 LSLRPIYFSSIPENSPEDTVIIKVEAEDKD-DLSNRYGITNVHFKIISGNPQSFFAID 1020
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 33/166 (19%)
Query: 5 PVYYAQIVENQSGI----LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSD-- 57
PV+Y I EN + L +L + GDL+ R+++K A N Y+++ DI ++
Sbjct: 2935 PVFYGIIQENSNATREEKLFATRLKVAVGDLEGIGRVTFKY-ANNSNQYWDLFDIDNETG 2993
Query: 58 ----------------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+T + V I V +VNDN P+ +Y+ +I E+
Sbjct: 2994 IITAISPLDREVKDQYNFSVIAITATGNSAEAKVIIDVGDVNDNAPIFEQNIYHLRIPED 3053
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSGSL 140
++ ++QL A G D + I Y++ A + Y +ID SG L
Sbjct: 3054 ETFGKELLQLKAYGG--DDKEVIIYQMQASDDVAKYLSIDAHSGLL 3097
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+++ +VNDN P + +Y A ++EN +VQ+ A+D D + R+SY I+
Sbjct: 3133 VEILDVNDNPPRFIQSIYRATVLENMQRGTKVVQVLANDPDSEHFGRVSYLIT 3185
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSG 484
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGMGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNQTSGEL 1219
>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Equus caballus]
Length = 3016
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 380 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPR 439
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 440 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 499
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 500 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 550
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 498 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 557
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 558 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 617
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 618 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 654
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 278 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTT 337
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 338 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 397
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 398 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSG 441
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 959 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 1002
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 1003 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 1062
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1063 FQLDIFSGEL 1072
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 811 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 870
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y I E+ ++Q
Sbjct: 871 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYEDVPPFTSVLQ 930
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 931 ISATDRDSGLNGRVFY 946
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 690 VTVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 747
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 748 NRFSITSQSG 757
>gi|340372651|ref|XP_003384857.1| PREDICTED: protocadherin Fat 4-like [Amphimedon queenslandica]
Length = 5831
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------I 54
I E Q LP+ Q +DGD P ++Y I++GN F+ID
Sbjct: 1512 SINEGQEYSLPVGQFECTDGDFGPFGEVTYNITSGNSNGLFSIDETGGQLLLMGEVDYET 1571
Query: 55 GSDLT-------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV---- 103
LT GG +V + +Q VN+ VP + +S I+P +
Sbjct: 1572 TQSLTLQVTCTDGGQASQSTLVSVSIQPVNE-VPPVFTSTGVVSLTVAESLIVPTLITVN 1630
Query: 104 -QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+L A+D DL P ++ Y ISAGN +S F I G L
Sbjct: 1631 DELEATDADLAPHNQVWYTISAGNSDSTFAISSTGGDL 1668
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
+ Q+++S G + ++ Y+ +SY I +D P+ + V I V+NVND
Sbjct: 1446 VFQISSSSGVISLISKLDYETQ----QSYALIVQATDSGTPPNTGQVAVNIFVENVNDMS 1501
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ + I E Q LP+ Q +DGD P ++Y I++GN F+ID G L
Sbjct: 1502 PVFTNATSSVSINEGQEYSLPVGQFECTDGDFGPFGEVTYNITSGNSNGLFSIDETGGQL 1561
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----IGSDLT--- 59
Y + EN P+ + A+D D+ + I+Y I GNP ++ ID + S LT
Sbjct: 3502 YQTSLPENTPLQSPVTTVRATDDDIGTNGEITYSIVGGNPNKFY-IDSQSGVISVLTSLD 3560
Query: 60 ---------------GG-------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GG + + + V ++NDN P Y I N S
Sbjct: 3561 RESVDSYSITIQATDGGISGNATNSNSANTTLNVTVLDINDNAPRLSQLAYVQFIYTNHS 3620
Query: 98 GILPIVQLAASDGDLDPDQRISYKI 122
+ ++Q+ SDGDL + ISY I
Sbjct: 3621 LLSTVLQVECSDGDLSENGTISYSI 3645
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-NIDIGS--------------- 56
EN S +P +++ ASD D+ + RI++ + + +F N + G
Sbjct: 2679 ENTSIAVPFIKVNASDNDIGLNGRITFSLIDDFDDQFFINSETGDISLLLPLDYETVSSY 2738
Query: 57 -----DLTGGPDQVY-------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ G D ++ + V + V +N++ P+ PVY A I N++ + + +
Sbjct: 2739 ALQVLAIDGSDDSLHDNRMNDTMTVNVTVTGINEHTPVCSQPVYSAYI--NRTSLNEVFR 2796
Query: 105 LAASDGDLDPDQRISYKI-SAGNPESYFNI 133
L D DL D +SY I AG S F+I
Sbjct: 2797 LNCFDSDLGVDGSLSYSIVDAGGYSSLFDI 2826
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAG------NPE-------- 47
L + Y Q + N S + ++Q+ SDGDL + ISY I N E
Sbjct: 3606 LSQLAYVQFIYTNHSLLSTVLQVECSDGDLSENGTISYSIDPAHDSFSINSEGSVLLTSE 3665
Query: 48 ------SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
FN+ + +D++ P +V I V P + Y I E+Q + P
Sbjct: 3666 QMEQTVHSFNV-LCTDMSTAPLSSSALVTIVVSKDQFEAPTFTNNSYSVSIPEDQGMLEP 3724
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++A+ + I Y IS GN + F ID SG++
Sbjct: 3725 FLTVSATSN--ESGVSIVYSISNGNEGTAFFIDPSSGNI 3761
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Multiple epidermal growth factor-like
domains protein 2; Short=Multiple EGF-like domains
protein 2; Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGMGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNQTSGEL 1219
>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Saimiri boliviensis boliviensis]
Length = 2897
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 261 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPR 320
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 321 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 380
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 381 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 431
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 379 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 438
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 439 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 498
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 499 VLHVQAIDADAGDNARLEYHLAGVGHDFPFTINNGTG 535
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 159 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTT 218
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 219 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 278
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 279 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSG 322
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 840 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 883
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 884 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 943
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 944 FQLDIFSGEL 953
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 692 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 751
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 752 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 811
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 812 ISATDRDSGLNGRVFY 827
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 571 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 628
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 629 NRFSITSQSG 638
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSDLTG----- 60
Y I EN PI+QL A+DGD + I Y+ + ++ F ID S L
Sbjct: 288 YRETIRENVEEGYPILQLRATDGDAAANANIRYRFVDPPAAQAVFEIDPRSGLITTSGRV 347
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP + V+I V + NDN P + Y AQ+ E+
Sbjct: 348 DREQKENYELAVEASDQGGEPGPRSATVRVHITVLDENDNAPQFSEKRYLAQVREDVRPH 407
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 408 TEVLRVTATDLDKDTNALVHYNIISGNSRGHFAIDSLTGEI 448
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 7 YYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS-------- 56
YY ++ E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 811 YYPGVISEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRR 870
Query: 57 ---------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 871 LDRESVPVYELTAYAVDRGVPPLRTPVNIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGS 930
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ +I Y+I GN F +DI SG L
Sbjct: 931 VVAQITAIDPDEGPNAQIMYQIVEGNIPELFQMDIFSGEL 970
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + ENQ+ ++ +AA D D R+SY ++A N S F ID S L
Sbjct: 180 YQALVAENQAPGTSVLSVAAQDPDAGEAGRLSYSMAALMNSRSLDLFRIDAASGLISTAE 239
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y I EN
Sbjct: 240 PLDRESMDLHYFRVTALDHGSPRLSATTMVAVTVADRNDHAPVFEQAEYRETIRENVEEG 299
Query: 100 LPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSG 138
PI+QL A+DGD + I Y+ + ++ F ID SG
Sbjct: 300 YPILQLRATDGDAAANANIRYRFVDPPAAQAVFEIDPRSG 339
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D+ + RI+Y + P+ ++D G+
Sbjct: 709 YSVSVNEDRPVGSTVVVISATDDDVGENARITYLLEDNLPQFRIDVDSGAITLQAELDYE 768
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V I V +VNDN P + Y I E+ ++Q
Sbjct: 769 DQVTYTLAITAKDNGIPQKADTTYVEIMVNDVNDNAPQFVASYYPGVISEDAPPFTSVLQ 828
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 829 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 863
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPDQVYLI--- 68
+ Q+ A D D P+ +I Y+I GN F +DI S D P+ V ++
Sbjct: 932 VAQITAIDPDEGPNAQIMYQIVEGNIPELFQMDIFSGELTTLIDLDYEMRPEYVIVVQAT 991
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 992 SAPLVSRATVHIRLIDQNDNSPVLKNFQILFNNYVSNRSNTFPSGIIGRIPAYDPDV--S 1049
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y GN ++ SG L
Sbjct: 1050 DRLFYTFERGNELELLVVNQTSGEL 1074
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + ++ + A D D++ ISY+I+ GN
Sbjct: 607 YHLRLNEDAAVGTSVLSVTAVDRDIN--SAISYQITGGNTRNRFAISTQGGMGLVTLALP 664
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E Y+ + + + D Y V+I + + N + P+ Y + E++
Sbjct: 665 LDYKQERYYKLIVTASDRTLHDNCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 722
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D+ + RI+Y + P+ F ID+ SG++
Sbjct: 723 VVVISATDDDVGENARITYLLEDNLPQ--FRIDVDSGAI 759
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------SYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNRTSGEL 1219
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3
[Cricetulus griseus]
Length = 3288
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 404 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARSEAAAAFEIDPRSGLIS 462
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 463 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVRE 522
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 523 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 568
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 932 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 991
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 992 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1051
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1052 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1090
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 516 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLD 575
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y++ IQV ++ND+ P+ + + ++EN
Sbjct: 576 FEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLGHS 635
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 636 VIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 672
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + + G+ P DQV
Sbjct: 843 VVVISASDDDVGENARITYLLEDNLPQFRIDANSGAITLQAPLDYEDQVTYTLAITARDN 902
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 903 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 962
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 963 QYTFQNGEDGDGDFTIEPTSG 983
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 727 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNSRNRFAISTQGGVGLVTLALP 784
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 785 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 842
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 843 VVVISASDDDVGENARITYLLEDNLPQ--FRIDANSGAI 879
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 296 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 355
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 356 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRENVEEG 415
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 416 YPILQLRATDGDAPPNANLRYRF-VGSPAARSEAAAAFEIDPRSG 459
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1052 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1111
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1112 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1169
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1170 DHLFYSFERGNELQLLVVNQTSGEL 1194
>gi|260795106|ref|XP_002592547.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
gi|229277768|gb|EEN48558.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
Length = 1894
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 5 PVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSDLTGGP 62
P +YA I E P+ + SD D+ + +++ I+AGN F I D ++T
Sbjct: 406 PSFYAVTISEGADVTSPVTMVTCSDDDVGENSELNFSITAGNSNDTFAINDTSGEITIAK 465
Query: 63 D-------------QV----------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D QV VY+ V NVND VP + Y + E++S
Sbjct: 466 DLDLEVTSFYSLGVQVSDSGALSLTGTATVYVTVTNVNDFVPAFSESSYSFNVSESESVG 525
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ ASD D D + ++Y I++GN F ID SG L
Sbjct: 526 TEVGQVVASDEDTDEEGVVTYSIASGNDGLAFGIDPVSGVL 566
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + E++S + Q+ ASD D D + ++Y I++GN F ID
Sbjct: 514 YSFNVSESESVGTEVGQVVASDEDTDEEGVVTYSIASGNDGLAFGIDPVSGVLSVAKKLD 573
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G D G + V I V + NDN P V Y ++E+
Sbjct: 574 RETIASYSLEVLAIDGGDSFGTYRNSTVRVNITVIDENDNPPTFDSLVMYTSVLESAPEG 633
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL +D D D + IS+ ISAGN E F +D SG+L
Sbjct: 634 TSLLQLNCTDADADANGEISFVISAGNDEGKFAVDRTSGTL 674
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
V Y ++E+ ++QL +D D D + IS+ ISAGN E F +D S
Sbjct: 621 VMYTSVLESAPEGTSLLQLNCTDADADANGEISFVISAGNDEGKFAVDRTSGTLRTVGNF 680
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D PD ++ VYI V +VNDN P+ + + E +
Sbjct: 681 DRENNPDYTLVLLATDWGQNPGRLTGSSTVYITVTDVNDNAPVCSPALLAVSVAEGAAVG 740
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ +D D + +S+ I AGN F ++ +GS+
Sbjct: 741 SSVVSVSCTDQDEGINAALSHTIVAGNTNDSFAVNSSTGSI 781
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------- 56
D + + E+ + I Q++A+D DL ++ ISY I +G+ ++ F +D +
Sbjct: 831 DAFFAFNVSEDATIGTTIGQVSATDEDL-YEESISYVIISGDDDNTFRMDSNTGTLSLQE 889
Query: 57 --------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDP-VYYAQIVEN 95
D +G V +V I V +VNDN P+ DP VYY ++E+
Sbjct: 890 NIDRESTDSLSLVVMATDSEDSSGAQHNVTTLVNITVLDVNDNPPV-FDPHVYYVSLLES 948
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
S + QL +D D + ++Y IS GN FN+ +G +
Sbjct: 949 TSIGAAVTQLKCTDNDEGTNADMTYSISTGNDALKFNVTSDNGEI 993
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y + EN + + Q++A+DGD++ +++ I +GN F ID LTG
Sbjct: 91 YSFLVSENTTVGTSVGQVSATDGDVNEVGDVTFSIVSGNDGDVFGIDF---LTGVISTAT 147
Query: 61 ------------------GPDQVYL------IVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G D + V I V++VNDN PM DP V
Sbjct: 148 VLDREIANSYALEVQARDGGDSLRTYQTSTTTVDITVEDVNDNNPM-FDPSVIYTTVSES 206
Query: 97 SGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+GI I QL +D D +Q ++Y ISAGN F++
Sbjct: 207 TGIGASIAQLNCTDSDDGVNQELTYVISAGNDVGLFSV 244
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P+ Y A + E + +VQ+ ASD D D + I+Y I++ +
Sbjct: 1561 VLVTILDVNDNTPVLTQASYTASVSEGVTAGTSVVQVVASDDDADENAEITYSITSASQP 1620
Query: 129 SYFNIDIGSG 138
+F ID SG
Sbjct: 1621 GHFEIDGASG 1630
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
++ + A D D PD + Y I GN E F I+ +
Sbjct: 1062 VISVTAVDSDSGPDGTVVYSIEEGNSEQKFVIEENTGELSVALPLDREYTDSYTLTVKAM 1121
Query: 57 DLTGGPDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
D Q + V I +++VNDN P+ VY ++E + ++QL A+D DL
Sbjct: 1122 DSPSNSSQALSNFTTVNITLEDVNDNHPIFTPSVYTTSVLEGAAVGSQLLQLTATDADLG 1181
Query: 114 PDQRISYKISAGNPESYFNI 133
+ + Y I+AG+ FN+
Sbjct: 1182 NNSVLDYTITAGDTNGTFNL 1201
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 3 LDP-VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
DP VYY ++E+ S + QL +D D + ++Y IS GN FN+
Sbjct: 936 FDPHVYYVSLLESTSIGAAVTQLKCTDNDEGTNADMTYSISTGNDALKFNVTSDNGEIIL 995
Query: 54 ----------------IGSD-----LTGGPDQVYLIVYIQVQNVNDNVPMTLDPV--YYA 90
SD LTG VY+QV N++ P + P Y
Sbjct: 996 QDSLDYETSTEYVLTATASDGGTPSLTGTA-----TVYVQVVAENEHTPEIIVPSGGYDV 1050
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I E+ ++ + A D D PD + Y I GN E F I+ +G L
Sbjct: 1051 VISEDLPIGTSVISVTAVDSDSGPDGTVVYSIEEGNSEQKFVIEENTGEL 1100
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y A + E + +VQ+ ASD D D + I+Y I++ + +F ID S + +
Sbjct: 1580 YTASVSEGVTAGTSVVQVVASDDDADENAEITYSITSASQPGHFEIDGASGVVRTAQALD 1639
Query: 66 ------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I + + NDN P +Y + EN +G +
Sbjct: 1640 RENIDSYTLTVQATDNGVPSFNNDTTVTITIDDENDNTPAFDSNLYSFTLEENVAGGTSV 1699
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESY 130
++ASD D++ + +S+ I + + + +
Sbjct: 1700 GDVSASDDDINSNADLSFSIVSDDSQHF 1727
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V +VND P+ Y I E P+ + SD D+ + +++ I+AGN
Sbjct: 390 VFVTVSDVNDVTPVCSPSFYAVTISEGADVTSPVTMVTCSDDDVGENSELNFSITAGNSN 449
Query: 129 SYFNIDIGSGSL 140
F I+ SG +
Sbjct: 450 DTFAINDTSGEI 461
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
PVY + EN I + A+D DL+ + ++Y I +G+ +YF+I+ + L
Sbjct: 1367 PVYTVYVDENIPVGSNITTVEATDPDLNGNGEVTYSIVSGDGMAYFDINSTTGLISTSAD 1426
Query: 59 -----------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+G P + L V + + ++NDN P + Y ++EN +
Sbjct: 1427 VDRETLALNNLVVQATDSGTPAKSSLCRVKVYLNDLNDNTPSFVPLEYVVSVLENAAVGT 1486
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + +++ I G+ + F ID +G++
Sbjct: 1487 LVTPVQALDPDESTNALLTFAILEGDDNNEFAIDSSTGTI 1526
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
S LT G V++ + NVN+ P + Y + EN + + Q++A+DGD++
Sbjct: 59 SGLTEGQLTGTATVHVTLTNVNEFAPNFTEVSYSFLVSENTTVGTSVGQVSATDGDVNEV 118
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
+++ I +GN F ID +G
Sbjct: 119 GDVTFSIVSGNDGDVFGIDFLTG 141
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------SYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNRTSGEL 1219
>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
Length = 2652
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 67 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEAFEIDPR 126
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 127 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 186
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + PI+++ ASD D + + Y I +GN F +D +G+L
Sbjct: 187 VQVREDVTPGAPILRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 237
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + PI+++ ASD D + + Y I +GN F +D
Sbjct: 185 YVVQVREDVTPGAPILRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 244
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 245 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 304
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 305 VLHVQAIDADAGENARLEYRLAGVGHDFPFTINNGTG 341
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 498 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 557
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 558 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 617
Query: 105 LAASDGDLDPDQRISYKISAGN 126
++A+D D + R+ Y GN
Sbjct: 618 ISATDRDSGLNGRVFYTFQGGN 639
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y + E+ ++Q++A+D D + R+ Y GN
Sbjct: 601 YQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRL 660
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y D P + + V + V +VNDN P+ + + EN L
Sbjct: 661 DRENVAQYILRAYAVDKGMPPARTPIEVTVTVLDVNDNPPVFKQDEFDVFVEENSPIGLA 720
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D + +I Y+I GN F +DI SG L
Sbjct: 721 VARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGEL 759
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 377 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 434
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 435 NRFSITSQSG 444
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 41 ISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ N Y+ + +D P L VY++V +VNDN P++ P Y ++E+ + +
Sbjct: 1117 LDCENKPYYWLVVSATDRAAVPLSSRLDVYVKVNDVNDNAPLSKLPYYKGTVLEDSAANV 1176
Query: 101 PIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
++ L A D D + I+++I+AG+P+ +F+ID SG +
Sbjct: 1177 SVLGLEAFDNDHTANMDNITFRITAGDPQGHFHIDTYSGRI 1217
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 40/163 (24%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP------- 62
++ EN+ P+V A G + Y IS GN E F+ID S +
Sbjct: 1692 EVEENKPIGTPVVVTQAQSGSA-----LYYDISLGNDEGCFSIDQNSGIVTTACVLDYEQ 1746
Query: 63 DQVYLIV---------------YIQVQNVNDNVPMTLDPVYYAQIVE----------NQS 97
Q YLI+ I V +VNDN P+ VY+ I E N+S
Sbjct: 1747 KQQYLIIVRATNLVNSWTEMALTIHVVDVNDNAPVLEPKVYFGTISEAAEPSSVVMTNES 1806
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
LP+V + A+D D D + +S+ I YF ID +GS+
Sbjct: 1807 --LPLV-VTATDADRDINAHLSFAIVDTWARRYFRIDSSTGSI 1846
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-----------AG---------- 44
+Y +I E+ + +V+L A+D D + +I YK+S AG
Sbjct: 845 LYTFKISESVNKGAVMVKLRATDADEGDNAKIRYKLSTETDDFIVDEKAGILIVHRNLDR 904
Query: 45 NPESYFNIDIGSD-------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+S +N+ + + LTG +V IQVQ+VND P Y A++ E+
Sbjct: 905 ERQSEYNLMVKATDSSIELPLTGT-----TMVNIQVQDVNDERPRFTLKNYIARVREDLP 959
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ +AA D DLD ++SY++ + + F ID +G
Sbjct: 960 KGSVIMTMAAQDPDLDDAGKVSYQLMSKELRNLFEIDSETG 1000
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP- 62
D ++YA + + LAAS G L Q + ++ + + D +G P
Sbjct: 1504 DQLFYAIHNAAATNSVQKFHLAASTGVLQVAQPLDHE----ETREHIITALAKD-SGWPG 1558
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ Y+ ++I V + ND+ P L + ++ E+ + +VQ A D D + RISY I
Sbjct: 1559 KRAYVRIHIHVADHNDHAPEFLQSSFEGKVFESAALGTSVVQTTAVDKDRGDNARISYSI 1618
Query: 123 SAGNPESYFNI 133
+GN S F I
Sbjct: 1619 VSGNVGSSFAI 1629
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----IGSDLT-- 59
Y A + EN S I+ ++A+D D R+ Y I + YF +D + + T
Sbjct: 2533 YEAIVPENSSASTYIITVSAADQDRGQYGRVKYSIQSEEMTHYFTLDPDTGELRTKRTLD 2592
Query: 60 ---------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG + +V + V + NDN P L P Y + +G I++
Sbjct: 2593 REKRSLYKIAIVAEDGGARIGHSVVRVTVTDENDNPPQFLLPEYRCNVKNFTTG-QAILK 2651
Query: 105 LAASDGDLDPDQRISYKISAGNPES 129
+ A+D DL P + + Y G+P++
Sbjct: 2652 VTATDQDLQP-RGLKYSFRDGDPQN 2675
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPDQVYLI--- 68
++ L A D D + RI Y IS+G+ +S F +D+ D P V I
Sbjct: 755 LLPLRAKDADHGYNGRIVYVISSGDDDSCFKMDLYKGNLMLVEPLDRERTPKYVLTITAY 814
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ +Y +I E+ + +V+L A+D D +
Sbjct: 815 DLGEPKKSASISVVVYVLDVNDNPPIFEKSLYTFKISESVNKGAVMVKLRATDADEGDNA 874
Query: 117 RISYKISA 124
+I YK+S
Sbjct: 875 KIRYKLST 882
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 40/159 (25%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------------- 57
++ N+S LP+V + A+D D D + +S+ I YF ID +
Sbjct: 1801 VMTNES--LPLV-VTATDADRDINAHLSFAIVDTWARRYFRIDSSTGSISAAHRLDRELR 1857
Query: 58 ------------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ GP +V +++ +VND+ P+ +Y +V
Sbjct: 1858 SSYTFSVEVCDNGRPTVLCSRGPAKVS----VEILDVNDSPPIFEKDLYNVTLVLPTHRG 1913
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + +L A D D+DP I Y I GN E +F +D +G
Sbjct: 1914 VTVAELVAHDADIDP--VIKYSIIGGNIEEHFQVDSVTG 1950
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 29/160 (18%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIG 55
L + ++ E+ + +VQ A D D + RISY I +GN S F I +
Sbjct: 1580 LQSSFEGKVFESAALGTSVVQTTAVDKDRGDNARISYSIVSGNVGSSFAIQPQLGTISVA 1639
Query: 56 SDLT----------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
L+ G P + V+I+V + P ++ EN+
Sbjct: 1640 KSLSQQLLPEYYLVVRAADHGSPSLNSTVTVHIKVTMATNAPPKFEADTKVVEVEENKPI 1699
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+V A G + Y IS GN E F+ID SG
Sbjct: 1700 GTPVVVTQAQSGSA-----LYYDISLGNDEGCFSIDQNSG 1734
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------SYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNRTSGEL 1219
>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
[Canis lupus familiaris]
Length = 2926
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 289 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPR 348
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 349 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 408
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 409 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 459
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 407 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 466
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 467 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 526
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 527 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTG 563
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A + +F++D
Sbjct: 187 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSKQFFSLDPITGAVTT 246
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 247 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 306
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 307 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSG 350
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 868 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 911
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 912 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 971
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 972 FQLDIFSGEL 981
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 720 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 779
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 780 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 839
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 840 ISATDRDSGLNGRVFY 855
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 599 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 656
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 657 NRFSITSQSG 666
>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Felis catus]
Length = 2931
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 293 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPR 352
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 353 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 412
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 413 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 463
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 411 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 470
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 471 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 530
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 531 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTG 567
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A + +F++D
Sbjct: 191 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPITGAVTT 250
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 251 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 310
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 311 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSG 354
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 872 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 915
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 916 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 975
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 976 FQLDIFSGEL 985
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 724 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 783
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 784 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 843
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 844 ISATDRDSGLNGRVFY 859
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 603 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 660
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 661 NRFSITSQSG 670
>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Ailuropoda melanoleuca]
Length = 2924
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 287 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPR 346
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 347 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 406
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 407 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 457
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 405 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTG 561
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A + +F++D
Sbjct: 185 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPITGAVTT 244
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 245 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 304
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 305 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSG 348
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 718 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 777
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 778 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 837
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 838 ISATDRDSGLNGRVFY 853
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 597 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 654
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 655 NRFSITSQSG 664
>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
Length = 2335
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ + G+P F ID
Sbjct: 120 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSEVFEIDPR 179
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 180 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAAVFLSVEDDNDNAPQFSEKRYV 239
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 240 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 290
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 238 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 297
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 298 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 357
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 358 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 394
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 723 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 766
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 767 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 826
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 827 FQLDIFSGEL 836
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 18 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGTVTT 77
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 78 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 137
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ + G+P F ID SG
Sbjct: 138 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSEVFEIDPRSG 181
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 575 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 634
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 635 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 694
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 695 ISATDRDSGLNGRVFY 710
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 454 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 511
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 512 NRFSITSQSG 521
>gi|443700420|gb|ELT99375.1| hypothetical protein CAPTEDRAFT_129407, partial [Capitella teleta]
Length = 114
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V ++V+++NDNVP T PVY + EN +V L A D D + +++Y I +G+P+
Sbjct: 37 VLVEVEDLNDNVPQTEFPVYEPMVPENSDAGHSVVNLEARDADDSKNNQLTYSIVSGDPQ 96
Query: 129 SYFNIDIGSGSL 140
+F+ID SG
Sbjct: 97 GFFSIDEKSGEF 108
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
PVY + EN +V L A D D + +++Y I +G+P+ +F+ID S
Sbjct: 54 PVYEPMVPENSDAGHSVVNLEARDADDSKNNQLTYSIVSGDPQGFFSIDEKS 105
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 359 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARSEAAAAFEIDPRSGLIS 417
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 418 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVRE 477
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 478 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 523
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 887 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 946
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 947 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1006
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1007 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1045
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 471 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLD 530
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y++ IQV ++ND+ P+ + + ++EN
Sbjct: 531 FEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLGHS 590
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 591 VIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 627
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + + G+ P DQV
Sbjct: 798 VVVISASDDDVGENARITYLLEDNLPQFRIDANSGAITLQAPLDYEDQVTYTLAITARDN 857
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 858 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 917
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 918 QYTFQNGEDGDGDFTIEPTSG 938
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 682 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNSRNRFAISTQGGVGLVTLALP 739
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 740 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 797
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 798 VVVISASDDDVGENARITYLLEDNLPQ--FRIDANSGAI 834
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 251 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 310
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 311 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRENVEEG 370
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 371 YPILQLRATDGDAPPNANLRYRF-VGSPAARSEAAAAFEIDPRSG 414
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1007 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1066
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1067 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1124
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1125 DHLFYSFERGNELQLLVVNQTSGEL 1149
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 433 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARKEAAAAFEIDPRSGLIS 491
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 492 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 551
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 552 DVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEI 597
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 961 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1020
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1021 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1080
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1081 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1119
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 545 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 601
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 602 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 661
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 662 GHSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 701
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 872 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 931
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 932 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 991
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 992 QYTFQNGEDGDGDFTIEPTSG 1012
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 325 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 384
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 385 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 444
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 445 YPILQLRATDGDAPPNANLRYRF-VGSPAARKEAAAAFEIDPRSG 488
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 756 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 813
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 814 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 871
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 872 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 908
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1081 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1140
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1141 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1198
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1199 DHLFYSFERGNELQLLVVNQTSGEL 1223
>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Callithrix jacchus]
Length = 2871
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 236 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPR 295
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 296 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 355
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 356 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 406
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 354 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 413
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 414 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 473
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 474 VLHVQAVDADAGDNARLEYRLAGVGHDFPFTINNGTG 510
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 134 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTT 193
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 194 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 253
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G+P F ID SG
Sbjct: 254 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSG 297
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 815 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 858
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 859 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 918
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 919 FQLDIFSGEL 928
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 667 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 726
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 727 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 786
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 787 ISATDRDSGLNGRVFY 802
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 546 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 603
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 604 NRFSITSQSG 613
>gi|170589928|ref|XP_001899725.1| Cadherin domain containing protein [Brugia malayi]
gi|158592851|gb|EDP31447.1| Cadherin domain containing protein [Brugia malayi]
Length = 4483
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 36 RISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
R S + +SY+ D+ P L V+++V ++ND++P+++ P+Y++ I EN
Sbjct: 976 RTSIVLDREACDSYWLTIEACDMNPVPLCSVLHVFVRVLDINDHIPLSIHPIYFSTIPEN 1035
Query: 96 QSGILPIVQLAASDGDLDPDQR----ISYKISAGNPESYFNIDIGSG 138
I ++ A D D D+ I +KI +G+P+S+F ID +G
Sbjct: 1036 SPEDTVITKVEAEDKDDLSDRHDITNIRFKIVSGDPQSFFAIDSKTG 1082
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 34/164 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR----ISYKISAGNPESYFNID--I 54
+++ P+Y++ I EN I ++ A D D D+ I +KI +G+P+S+F ID
Sbjct: 1022 LSIHPIYFSTIPENSPEDTVITKVEAEDKDDLSDRHDITNIRFKIVSGDPQSFFAIDSKT 1081
Query: 55 GSDLTGGPDQV-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYA 90
G +T G ++ ++I V I + ++NDN+P+ Y
Sbjct: 1082 GYIVTRGKRRLDRETQKEHVIVVEICDQGHPKLCTTVSVVITITDLNDNLPLFKQTTYNF 1141
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ ++ G L ++ A D D + RI Y + +P F+ID
Sbjct: 1142 NVPADKIGEL--CRVFAMDIDEGQNARILYNFTEADPR--FSID 1181
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNID----------- 53
+Y+ +I E+++ ++QL A GD + ISY++ A + Y +ID
Sbjct: 3124 IYHLRIAEDEALGKELLQLKAYGGD--DKEIISYQMQASDDVAKYLSIDANSGLLKLASV 3181
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
I +D P + +++ +VNDN P+ + +Y A ++EN
Sbjct: 3182 LDFEKLEKFMVSVIATDSGKPPLNSTCEIDVEILDVNDNPPLFMQHIYRAMVLENMQRGT 3241
Query: 101 PIVQLAASDGDLDPDQRISYKIS 123
+VQ+ A+D D + R+SY I+
Sbjct: 3242 KVVQVLANDPDSEHFGRVSYSIT 3264
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 5 PVYYAQIVENQSGI----LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSD-- 57
PV+Y + EN++ + +L + DLD +++K A N Y ++ DI S+
Sbjct: 3014 PVFYGMVRENRNATKEEKVFATRLETTIDDLDGIGSVTFKF-ANNSNQYLDLFDIDSETG 3072
Query: 58 ----------------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
++ + V I V +VNDN P+ +Y+ +I E+
Sbjct: 3073 VIAAISSLDREIKDQYDFSVLAVSTAGNSAEAKVIIDVGDVNDNAPVFEQNIYHLRIAED 3132
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSGSL 140
++ ++QL A G D + ISY++ A + Y +ID SG L
Sbjct: 3133 EALGKELLQLKAYGG--DDKEIISYQMQASDDVAKYLSIDANSGLL 3176
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog),
5 prime [Microtus ochrogaster]
Length = 3301
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 433 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARKEAAAAFEIDPRSGLIS 491
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 492 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 551
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 552 DVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEI 597
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 961 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1020
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + +Q+VNDN P+ + ++ EN
Sbjct: 1021 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTIQDVNDNAPVFPAEEFEVRVKENSIVGSV 1080
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1081 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1119
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 545 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 601
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 602 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 661
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 662 GHSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 701
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 872 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 931
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 932 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 991
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 992 QYTFQNGEDGDGDFTIEPTSG 1012
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 325 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 384
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 385 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 444
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 445 YPILQLRATDGDAPPNANLRYRF-VGSPAARKEAAAAFEIDPRSG 488
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 756 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 813
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 814 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 871
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 872 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 908
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1081 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1140
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1141 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1198
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1199 DHLFYSFERGNELQLLVVNQTSGEL 1223
>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3281
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT- 59
L + AQ++ENQ ++ + A+D D + +I+Y G E F I+ G+ T
Sbjct: 1632 LRAEFEAQVMENQGPGASVLTVTATDRDQGSNGQITY---GGVSEEGFIINPVTGTITTT 1688
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P+ +V + VQ+VNDN P+ P Y ++ ENQ+
Sbjct: 1689 KELDTELQDHYTLTVYARDGGLPPNFAKTVVRVAVQDVNDNAPIFAKPFYGLEVPENQAP 1748
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + L A+D D P + Y+I+AG+P+ F + +G+L
Sbjct: 1749 V-ELCILKATDPDSGPGGELEYRIAAGDPDGDFQLHASTGAL 1789
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y ++E + I++L A+D D P+ + Y IS+GN + F +D S D
Sbjct: 2579 YTVTLIEGATAGTEIIRLTATDPDSTPNAEVQYSISSGNEVNLFTVDPWSGALKLQRALD 2638
Query: 58 LTGGPDQVYLI-------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
P V ++ V ++V++VNDN P V A I ENQ +
Sbjct: 2639 REHQPTHVVIVQATDGQGHFALAPVIVEVKDVNDNHPFFPVDVLIASIRENQPANSAVTV 2698
Query: 105 LAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
L A D D ++ Y + +G + F +D SG +
Sbjct: 2699 LHAIDHDTGVFGQLKYYMLERSGAGKESFAVDQNSGEI 2736
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I + +VNDN P Y ++E + I++L A+D D P+ + Y IS+GN +
Sbjct: 2562 ITIGDVNDNPPAFTRAEYTVTLIEGATAGTEIIRLTATDPDSTPNAEVQYSISSGNEVNL 2621
Query: 131 FNIDIGSGSL 140
F +D SG+L
Sbjct: 2622 FTVDPWSGAL 2631
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----------------------E 47
++E+Q I+ + A D D + R+SY+I AGN +
Sbjct: 1535 VMEDQPVGFVILYVMARDSDEGENGRVSYRIQAGNSAGRFSLNPDTGSLSILKSLDREEQ 1594
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FN+ I ++ G P ++ +QV +VND P+ L + AQ++ENQ ++ +
Sbjct: 1595 EVFNLTIVAEDHGTPQLSTSQVLCVQVIDVNDEAPVFLRAEFEAQVMENQGPGASVLTVT 1654
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D + +I+Y G E F I+ +G++
Sbjct: 1655 ATDRDQGSNGQITY---GGVSEEGFIINPVTGTI 1685
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y ++ ENQ+ + + L A+D D P + Y+I+AG+P+ F +
Sbjct: 1736 PFYGLEVPENQAPV-ELCILKATDPDSGPGGELEYRIAAGDPDGDFQLHASTGALSTSRG 1794
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ +D + V + V +VNDN P+ Y +I E+ +
Sbjct: 1795 LDRETHAKYTLEVVATDRGSPALSATVTVEVNVLDVNDNNPVFSKSSYSVEISEDATEGA 1854
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A+D D D + ++ Y +S F +D +G +
Sbjct: 1855 QVLEVSATDADEDLNGKVLYFLSR-EAHGAFTVDEHNGRI 1893
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y+ + +Q+VNDN+P Y A + E Q +PI+Q+ A D D + +++Y I +
Sbjct: 2130 YMAFNLILQDVNDNLPRFQLQNYVAYMKEAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSS 2189
Query: 126 NPESYFNIDIGSGSL 140
+ F ID +GS+
Sbjct: 2190 SMSGLFKIDPVTGSI 2204
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V+++NDN P +Y + E+ ++ + A+D D + RI+YK+ + E
Sbjct: 2338 ITILVEDINDNAPAFTHDLYQVTLPEHTPPGSAVITVTATDRDSGENGRITYKVMSSTKE 2397
Query: 129 SYFNIDIGSGSL 140
++ ID G+G+L
Sbjct: 2398 GFY-IDPGNGTL 2408
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN--PESY-FNIDIGS----- 56
Y A I EN ++++A+D D ISY + S+GN P + N + G
Sbjct: 557 YNASIKENTPAGTCFLEVSATDEDRGSFGTISYNLGSSSGNTLPTQFTINKETGQLCTST 616
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
DLT GG V + V ++NDN P+ +Y + + +
Sbjct: 617 ALDRDEGQDKFDLTVTATDGGGLSSVARVRVTVVDINDNRPIFYPVLYTVSLSTHSAPGT 676
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V++ A+D D+ + R++Y+ G S+F ++ +G
Sbjct: 677 SVVKVTANDPDVGENGRVTYRTVPGGGSSFFTLNKDTG 714
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
++ + A+D D + RI+YK+ + E ++ ID G+
Sbjct: 2371 VITVTATDRDSGENGRITYKVMSSTKEGFY-IDPGNGTLFINHRVEFDPERPSVSIVIEA 2429
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
D P + V +Q+ +VNDN P+ Y A + E+ ++ A D DL +
Sbjct: 2430 RDRGLPPLSSFTTVQVQISDVNDNAPVFHQSEYRATVSEDTIPGSTVLTFEAFDSDLSRE 2489
Query: 116 QR-ISYKISAGNPESYFNID 134
+ I++GN + F I+
Sbjct: 2490 NCGFDFAIASGNEGNAFQIE 2509
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------SYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFGEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNRTSGEL 1219
>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
Length = 2493
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID-------- 53
L P Y A++ E+ +++++ASD D+ + +I Y S G+ + F ID
Sbjct: 647 LKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRT 706
Query: 54 ----------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ +D P Q + V + +++V D+ P+ P+Y + E+
Sbjct: 707 LKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTP 766
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++ + A DL P+ + Y I GN F+I+ +G++
Sbjct: 767 PRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAI 809
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y A++ E+ S ++ + A+D D + +ISY I+ PE + G T G
Sbjct: 548 YSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDRE 607
Query: 62 ----------------PD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
P + VYI + +VNDN P+ L P Y A++ E+ +++
Sbjct: 608 KVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIE 667
Query: 105 LAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
++ASD D+ + +I Y S G+ + F ID G
Sbjct: 668 VSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQG 702
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 23/157 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P+Y + E+ P++ + A DL P+ + Y I GN F+I+ +
Sbjct: 755 PLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMK 814
Query: 59 ---------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
T P V + ++++NDN P+ ++ I + + P
Sbjct: 815 LDYETQSEYRLTVRATLSPFFTETTVMVYLKDINDNTPVL--EAFHMNINVQEGKVPPEA 872
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ D D ++++K+ GN + + ++ SG L
Sbjct: 873 RYKIPAYDPDVSDKLTFKVMEGNAKEWVTLNATSGEL 909
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLTG 60
Y+ I EN ++Q+ A D D P + +S+ + F I+ + L
Sbjct: 447 YHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNY 506
Query: 61 GPDQVYL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY+ +VY+ V + N + P Y A++ E+ S ++ +
Sbjct: 507 NTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVL 566
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D + +ISY I+ PE F++D +G
Sbjct: 567 ATDRDTGSNAKISYSIATLVPE--FSVDETTG 596
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 416 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAADAFEIDPRSGLIS 474
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 475 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 534
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 535 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 580
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 944 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1003
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1004 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1063
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1064 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1102
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 528 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 584
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 585 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 644
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 645 GHSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 684
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 841 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 900
Query: 63 DQV-YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV Y + V + V +VNDN P + Y + E+ ++Q
Sbjct: 901 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 960
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 961 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 995
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 308 YQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLDLFSIDPQSGLIRTEA 367
Query: 60 ----GGPDQVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ YL +V + V + ND+ P+ Y + EN
Sbjct: 368 ALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 427
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P F ID SG
Sbjct: 428 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAADAFEIDPRSG 471
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 739 YHLRLNEDATVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 796
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 797 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 854
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 855 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 891
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1064 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1123
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N S P I ++ A D D+
Sbjct: 1124 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNHSDTFPSGIIGRIPAYDPDV--S 1181
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1182 DHLFYSFERGNELQLLVVNQTSGEL 1206
>gi|432103917|gb|ELK30750.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Myotis davidii]
Length = 2668
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G+P F ID
Sbjct: 67 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSDVFEIDPR 126
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 127 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATASVFLSVEDDNDNAPQFSEKRYV 186
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 187 VQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 237
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 185 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 244
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 245 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 304
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 305 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 341
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 646 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 689
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 690 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 749
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 750 FQLDIFSGEL 759
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 498 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 557
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y I E+ ++Q
Sbjct: 558 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYEDAPPFTSVLQ 617
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 618 ISATDRDSGLNGRVFY 633
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 377 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 434
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 435 NRFSITSQSG 444
>gi|348557432|ref|XP_003464523.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cavia
porcellus]
Length = 4356
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY Q+ EN ++Q+ A D D D I Y + AG + F+ID + +
Sbjct: 1036 VYQGQVQENSPPGTQVMQVMAQDDDNGSDGEIQYFLRAGTGLAAFSIDPDTGMIQTRAPL 1095
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P VYI++ +VNDN P PV+Y IVEN
Sbjct: 1096 DRESVPYYWLTVLAVDGGSVPLSSVTEVYIEITDVNDNPPRMSRPVFYPCIVENAPLGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I+AGN F + +G L
Sbjct: 1156 VLQLDARDPDPSSRGKLTFNITAGNHVGVFTLHPLTGLL 1194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
+IVE+ S Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2310 EIVEDGSDASKFFQINGSTGEMVTLQELDYEA-----QRHFHVKVRATDRGNPPLTGETL 2364
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P P Y A + E + ++++ A D D R+ Y I +GN +
Sbjct: 2365 VIVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQD 2424
Query: 129 SYFNIDIGSG 138
+F+I+ SG
Sbjct: 2425 RHFSINKSSG 2434
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---G 125
V+IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY++SA
Sbjct: 2785 VHIQVKDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGNDGQVSYRLSAEPGS 2844
Query: 126 NPESYFNIDIGSG 138
+ F ID SG
Sbjct: 2845 SVHELFAIDSESG 2857
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F+I+ S +
Sbjct: 2382 PQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINKSSGIISMLNL 2441
Query: 59 ------------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G D V+ + VYI N N P +Y A++ EN ++
Sbjct: 2442 CKKQLDSSYNLRVGASDGVFQATVPVYINTTNANKYSPEFQQHIYEAELAENAKEGTKVI 2501
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2502 ELLAIDKDSGPYGTVDYTI 2520
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y A++ EN +++L A D D P + Y I F+I+ +T
Sbjct: 2485 IYEAELAENAKEGTKVIELLAIDKDSGPYGTVDYTIINKLAGEKFSINPNGQITTLQKLD 2544
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + IV I + + NDN P Y + N S P+
Sbjct: 2545 RENSTERVIAIKVMARDGGGKVAFCIVKIILTDENDNAPQFKASRYTLSVPSNVSKDFPV 2604
Query: 103 VQLAASDGDLDPDQRISYKI 122
+Q+ A D D + ++Y +
Sbjct: 2605 IQVLAYDADEGRNADVTYSV 2624
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNV--PMTL 84
G L ++ + ++ AG +N+ + +G P + +++V +VN+N+ P
Sbjct: 979 GALSLEKELDFERRAG-----YNLSLWVSDSGKPLARRTLCHVEVIVLDVNENLHPPRFA 1033
Query: 85 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
VY Q+ EN ++Q+ A D D D I Y + AG + F+ID +G
Sbjct: 1034 SFVYQGQVQENSPPGTQVMQVMAQDDDNGSDGEIQYFLRAGTGLAAFSIDPDTG 1087
>gi|291239827|ref|XP_002739825.1| PREDICTED: Cadherin-23-like [Saccoglossus kowalevskii]
Length = 3451
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y ++EN + ++ L+ASDGD+ + I+Y I+ GN + F I S L
Sbjct: 984 YEVSVLENATRGTSLIVLSASDGDIGTNADINYFITHGNQDGKFQIHFQSGLVQTSAFLD 1043
Query: 63 ---------------DQVY-----LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ VY V + V ++NDN P+ + Y ++EN + I
Sbjct: 1044 REVVEEYNLTIEAIDNGVYAKTGTCYVTVNVLDINDNRPIFTESNYDVTVMENVTQDYTI 1103
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V + A D D+ + +I+Y I AGN ++ F ID G +
Sbjct: 1104 VTVHALDADIGENAKITYAIIAGNTQNSFVIDSNYGDI 1141
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-----L 58
D Y +VENQ ++Q++ASD D + +SY I + P + N D+ S L
Sbjct: 875 DTPYIGSVVENQPAGTSVIQVSASDLDFGENGTVSYFIVSLEPNTN-NFDMNSSTGLITL 933
Query: 59 TGGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQS 97
T D+ Y+ Y I++++ ND+ P+ Y ++EN +
Sbjct: 934 THPLDREYIQAYNITIQARDGGMDPNVAIATVQIEIEDDNDHSPLFTANSYEVSVLENAT 993
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L+ASDGD+ + I+Y I+ GN + F I SG
Sbjct: 994 RGTSLIVLSASDGDIGTNADINYFITHGNQDGKFQIHFQSG 1034
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+D Y I E+ + Q++A D D+ +Q + Y+I+ P YF +D S +
Sbjct: 768 IDEPYMTTISEDVDNGTYVFQVSAIDADIGSNQLLVYEINPFTP--YFKVDSASGVITTT 825
Query: 63 D-----------QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D ++ L IV++ V ++NDNVP+ D Y +VEN
Sbjct: 826 DVPLDREMNTAQEIILTVKDSGRPLRRSSHSAIVHVTVLDINDNVPVFEDTPYIGSVVEN 885
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
Q ++Q++ASD D + +SY I + P + N D+ S +
Sbjct: 886 QPAGTSVIQVSASDLDFGENGTVSYFIVSLEPNTN-NFDMNSST 928
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------SDL 58
Y ++EN + IV + A D D+ + +I+Y I AGN ++ F ID L
Sbjct: 1089 YDVTVMENVTQDYTIVTVHALDADIGENAKITYAIIAGNTQNSFVIDSNYGDIRRNEQPL 1148
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
++ Y++ V + V +VND P+ VYY + +G
Sbjct: 1149 DRETEESYILTVEASNNDSNMFRSQVRVSMMVYDVNDEKPVFTQSVYYRPDLSESAGKGT 1208
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ ++A D DL R+ Y I+AGN F+ID +G
Sbjct: 1209 SVILVSAEDPDLSDGGRVVYSITAGNDMDEFSIDSSTG 1246
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E + I + A+D D + I Y I+ GN + FN+
Sbjct: 665 VYQFAVSEEADPGITIGMIRATDMDSTTNAYIDYNITDGNIDGSFNMKRVGSGEIILERQ 724
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
I SD V I V++VNDN P+ +D Y I E+
Sbjct: 725 LDRENIDMYGLTVIASDRGIPRHSAVCYVTIIVRDVNDNDPIWIDEPYMTTISEDVDNGT 784
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ Q++A D D+ +Q + Y+I+ P YF +D SG
Sbjct: 785 YVFQVSAIDADIGSNQLLVYEINPFTP--YFKVDSASG 820
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 453 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAASAAFEIDPRSGLIS 511
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 512 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 571
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 572 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 617
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 981 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1040
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1041 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1100
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1101 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1139
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ N D G+ P
Sbjct: 878 YSVNVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRINADSGAITLQAPLDYE 937
Query: 63 DQV-YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV Y + V + V +VNDN P + Y + E+ ++Q
Sbjct: 938 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 997
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 998 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1032
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 565 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 621
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 622 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 681
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P+ F I+ +G
Sbjct: 682 GHSVIHIQAVDADHGENARLEYSLTGVAPDMPFVINSATG 721
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 776 YHLRLNEDAAVGTTVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 833
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 834 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVNVNEDRPVGST 891
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ N D G+ +L
Sbjct: 892 VVVISASDDDVGENARITYLLEDNLPQFRINADSGAITL 930
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + EN+ ++++AA D D R+ Y ++A N S F+ID S L
Sbjct: 346 YQALVPENEVAGTAVLRVAAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEA 405
Query: 60 ----GGPDQVYLIVYIQ---------------VQNVNDNVPMTLDPVYYAQIVENQSGIL 100
++ YL V Q V + ND+ P+ Y + EN
Sbjct: 406 ALDRESMERHYLRVTAQDHGSPRLSPHPXXXXVADRNDHSPVFEQAQYRETLRENVEEGY 465
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 466 PILQLRATDGDAPPNANLRYRF-VGPPAARAAASAAFEIDPRSG 508
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1101 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1160
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1161 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGVIGRIPAYDPDV--S 1218
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1219 DHLFYSFERGNELQLLVVNQTSGEL 1243
>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Nomascus leucogenys]
Length = 2871
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 293 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 352
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P +
Sbjct: 353 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKXXX 412
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 413 XQVREDVTPGXPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 463
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 191 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPTTGAVTT 250
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 251 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 310
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 311 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 354
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 414 QVREDVTPGXPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYET 473
Query: 54 -------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ + G P V +V +QV ++NDN P+ + + A ++E+ ++
Sbjct: 474 TKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLH 533
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + R+ Y+++ + F I+ G+G
Sbjct: 534 VQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 567
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 872 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 915
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 916 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 975
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 976 FQLDIFSGEL 985
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 724 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 783
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 784 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 843
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 844 ISATDRDSGLNGRVFY 859
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 603 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 660
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 661 NRFSITSQSG 670
>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Pan paniscus]
Length = 3312
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Nomascus leucogenys]
Length = 4067
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 566
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 627 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 672
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 676
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 677 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 736
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 737 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 776
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 985 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1044
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1045 DREAVSVYELTAYAVDRGVPPLRTPVNIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1104
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1105 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1143
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 882 YSVSVNEDRRVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 941
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 942 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1001
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1002 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1036
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 520 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 563
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 29/134 (21%)
Query: 32 DPDQRISYKISAGNP-------------------------ESYFNIDIGSDLTGGPDQVY 66
D + ISY+I+ GN E YF + + + D Y
Sbjct: 803 DANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDYKQERYFKLVLTASDRALHDHCY 862
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
V+I + + N + P+ Y + E++ IV ++ASD D+ + RI+Y +
Sbjct: 863 --VHINITDANTHRPVFQSAHYSVSVNEDRRVGSTIVVISASDDDVGENARITYLLEDNL 920
Query: 127 PESYFNIDIGSGSL 140
P+ F ID SG++
Sbjct: 921 PQ--FRIDADSGAI 932
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1105 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1164
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1165 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1222
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1223 DHLFYSFERGNELQLLVVNQTSGEL 1247
>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
gorilla gorilla]
Length = 3287
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGQVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSFQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 560 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAASAAFEIDPRSGLIS 618
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 619 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 678
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 679 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 724
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1088 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1147
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1148 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1207
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1208 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1246
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 672 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 728
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 729 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 788
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P+ F I+ +G
Sbjct: 789 GHSVIHIQAVDADHGENARLEYSLTGMAPDMPFVINSATG 828
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 985 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 1044
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 1045 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1104
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1105 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1139
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 452 YQALVPENEAAGTTVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEA 511
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 512 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRENVEEG 571
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 572 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAASAAFEIDPRSG 615
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 883 YHLRLNEDAAVGTTVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 940
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 941 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 998
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 999 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 1035
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1208 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1267
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1268 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGVIGRIPAYDPDV--S 1325
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1326 DHLFYSFERGNELQLLVVNQTSGEL 1350
>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 3037
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 163 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 221
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 222 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 281
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 282 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 327
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 691 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 750
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 751 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 810
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 811 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 849
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 275 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 331
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 332 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 391
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 392 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 431
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 588 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 647
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 648 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 707
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 708 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 742
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 486 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 543
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 544 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPMGST 601
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 602 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 638
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 55 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 114
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 115 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 174
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 175 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 218
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 811 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 870
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 871 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 928
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 929 DHLFYSFERGNELQLLVVNQTSGEL 953
>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
Length = 3312
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPMGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
sapiens]
gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Cadherin family member 11; AltName:
Full=Epidermal growth factor-like protein 1;
Short=EGF-like protein 1; AltName: Full=Flamingo homolog
1; Short=hFmi1; AltName: Full=Multiple epidermal growth
factor-like domains protein 2; Short=Multiple EGF-like
domains protein 2; Flags: Precursor
Length = 3312
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPMGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P+ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDMPFVINSATG 706
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQALVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTTVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGVIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
Length = 4186
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 566
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 627 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 672
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1036 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1095
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1096 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1156 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1194
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 676
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 677 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 736
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 737 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 776
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 933 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 992
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 993 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1052
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1053 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1087
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 831 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 888
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 889 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPMGST 946
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 947 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 983
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 520 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 563
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1156 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1215
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1216 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1273
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1274 DHLFYSFERGNELQLLVVNQTSGEL 1298
>gi|209489409|gb|ACI49172.1| hypothetical protein Csp3_JD01.004 [Caenorhabditis angaria]
Length = 4291
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 52 IDIGSDLTGGPDQVYLIV--YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
ID G G ++ IV +++V + ND+ P PVY+A + EN + IV++ ASD
Sbjct: 984 IDSGKMRGSGSERRRAIVHVFVRVLDRNDHRPQPRQPVYFASVKENSEANVVIVKVEASD 1043
Query: 110 GD---LDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + Y+I G+P+S+F ID+ SG L
Sbjct: 1044 LDDIGNDAAPPLQYRIERGDPQSFFRIDLTSGYL 1077
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 33/159 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGD---LDPDQRISYKISAGNPESYFNIDIGSD-LT- 59
PVY+A + EN + IV++ ASD D D + Y+I G+P+S+F ID+ S LT
Sbjct: 1020 PVYFASVKENSEANVVIVKVEASDLDDIGNDAAPPLQYRIERGDPQSFFRIDLTSGYLTT 1079
Query: 60 ----------------------GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG Q+ + V +++++ NDN P P+++ +
Sbjct: 1080 SGSRKLDREKQAEHELWVSICDGGEPQLCSQVAVIVRIEDENDNAPQFTQPIHHYNVRAK 1139
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
SG L ++ A D D + I Y I+ G+ S F+ID
Sbjct: 1140 FSGEL--CRIFAVDLDEGINAEIFYNITEGD--SRFSID 1174
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--S 123
++ + I V +VNDN P+ L+ V +I E+ + LAA+D DL + RI Y I +
Sbjct: 775 FVNLTIYVDDVNDNPPICLERVTKTRIPEDYPHGAFVTCLAANDRDLGQNARIRYTIEET 834
Query: 124 AGNPESYFNIDIGSGSL 140
NP F ID +G +
Sbjct: 835 EKNP---FRIDHHTGCV 848
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGD-------------------LDPDQRISYKISAG-N 45
VY +++E++S +V++ A GD LDP+ I K++ G +
Sbjct: 3082 VYSMKVMESESIGYELVKVRADGGDSGESVTYSLKPSKMNKMVKLDPNSGI-LKLAEGLD 3140
Query: 46 PESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
E I+I D P + I+V + NDNVP+ + Y+A ++E+ I
Sbjct: 3141 FEKLQKIEIFIEAKDSGNPPLTAETKIEIEVMDENDNVPIFKNTTYFATVLEHSKNGTEI 3200
Query: 103 VQLAASDGDLDPDQRISYKIS 123
+++ A D D + RI Y I
Sbjct: 3201 LKVEAEDKDSEHFGRIVYSIK 3221
>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Pan paniscus]
Length = 4186
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 566
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 567 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 626
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 627 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 672
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1036 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1095
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1096 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1156 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1194
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 676
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 677 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 736
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 737 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 776
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 933 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 992
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 993 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1052
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1053 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1087
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 831 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 888
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 889 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 946
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 947 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 983
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 520 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 563
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1156 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1215
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1216 SAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1273
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1274 DHLFYSFERGNELQLLVVNQTSGEL 1298
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y Q+ E+ IV++ A+D D D + + Y I +GN F+ID I + L
Sbjct: 368 YIVQVREDIKTHTEIVRVTATDIDKDSNALVHYNIISGNSRGQFSIDSVTGEVQIVTPLD 427
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y + + IQV +VND+ P+ + + ++EN
Sbjct: 428 FETEREYTLRVRAQDAGRPPLSNNTGTISIQVVDVNDHAPIFVSTPFQVSVLENAPLGHS 487
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ YK++ PES F I+ +G
Sbjct: 488 IIHIQAIDADYGENSRVEYKLTGMKPESPFVINSATG 524
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSDLTG----- 60
Y I EN PI+QL A+D D + I Y+ ++ S F ID S L
Sbjct: 260 YRESIRENVEEGYPILQLRATDMDSQANANIKYRFVNEQAAHSVFEIDARSGLITTSGQV 319
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP + V I + + NDNVP + Y Q+ E+
Sbjct: 320 DREKREKYSLIVEASDQGKDPGPRSSTVKVDITILDENDNVPQFSEKRYIVQVREDIKTH 379
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV++ A+D D D + + Y I +GN F+ID +G +
Sbjct: 380 TEIVRVTATDIDKDSNALVHYNIISGNSRGQFSIDSVTGEV 420
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y Q+ ENQ P++ ++A D D R+ Y + A N +S F+ID + L
Sbjct: 152 YQVQVAENQPPGTPVITMSAQDPDTGEAGRLRYTMDALMNSKSLELFSIDSVTGLISTIE 211
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V I V + ND+ P+ Y I EN
Sbjct: 212 ILDRESMDLHYFRVSAIDHGTPRLSATTMVAITVSDRNDHSPLFEQSEYRESIRENVEEG 271
Query: 100 LPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSG 138
PI+QL A+D D + I Y+ ++ S F ID SG
Sbjct: 272 YPILQLRATDMDSQANANIKYRFVNEQAAHSVFEIDARSG 311
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----DLTGGPDQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ + DQV
Sbjct: 695 VVIISASDEDVGENARITYSLEDNIPQFRIDPDTGAITLRAMLDYEDQVTYTLAVIAKDN 754
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V I V +VNDN P + Y+ + E+ +VQ++A+D D + R+
Sbjct: 755 GIPQKSDTTYVEIMVNDVNDNAPQFANTQYHGIVSEDAPPFTSVVQISATDRDSHSNGRV 814
Query: 119 SYKISAGNP-ESYFNIDIGSG 138
Y G+ + F I+ SG
Sbjct: 815 QYTFQNGDDGDGDFTIEPTSG 835
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQ 64
+ ++EN I+ + A D D + R+ YK++ PES F I+ G GP
Sbjct: 474 FQVSVLENAPLGHSIIHIQAIDADYGENSRVEYKLTGMKPESPFVINSATGWITVSGPLD 533
Query: 65 VYLI----------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
++ V I + +VNDN P Y+ ++ E+ + +
Sbjct: 534 REMVEQYVFGVEARDHGNPSLSASAGVTITIMDVNDNRPEFTQREYFIRLNEDATVGTSV 593
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ + A D D++ I+Y+I+ GN + + I GS
Sbjct: 594 LSVTAIDRDVN--SAITYQITGGNTRNRYAISTQGGS 628
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGS--------- 56
Y+ + E+ +VQ++A+D D + R+ Y G+ + F I+ S
Sbjct: 784 YHGIVSEDAPPFTSVVQISATDRDSHSNGRVQYTFQNGDDGDGDFTIEPTSGIIRTVRKL 843
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + + EN
Sbjct: 844 DRESVPFYELTAYAVDRGMPPLRSPVRIQVAVQDVNDNAPVFPADEFEVYVKENSIVGSV 903
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D P+ +I Y+I GN F +D SG L
Sbjct: 904 VGKIKATDPDEGPNAQIMYQIVEGNIPEIFQMDFFSGEL 942
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPDQVYLI----- 68
++ A+D D P+ +I Y+I GN F +D S D P+ V ++
Sbjct: 906 KIKATDPDEGPNAQIMYQIVEGNIPEIFQMDFFSGELTALIDLDYEAKPEYVIVVQATSA 965
Query: 69 -------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPDQR 117
V I++ + NDN P+ + + + + N S P I ++ A D D+ R
Sbjct: 966 PLVSRATVRIKLIDQNDNSPVLKNFQILFNNYISNSSNTFPSGVIGKIPAYDPDV--SDR 1023
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y GN S ++ SG L
Sbjct: 1024 LLYTFERGNELSLLIVNHSSGEL 1046
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 509 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 567
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 568 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 627
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 628 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 673
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1037 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1096
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1097 DREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1156
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1157 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1195
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 934 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 993
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 994 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1053
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1054 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1088
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 832 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 889
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 890 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 947
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 948 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 984
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 401 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 460
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 461 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 520
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 521 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 564
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1157 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1216
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1217 SAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1274
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1275 DHLFYSFERGNELQLLVVNQTSGEL 1299
>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
chinensis]
Length = 2958
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G P F ID
Sbjct: 254 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGAGPSEVFEIDPR 313
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 314 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 373
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 374 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 424
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 372 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 431
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 432 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 491
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F+I+ G+G
Sbjct: 492 VLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTG 528
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 833 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 876
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 877 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 936
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 937 FQLDIFSGEL 946
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 685 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 744
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 745 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 804
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 805 VSATDRDSGLNGRVFY 820
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 564 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 621
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 622 NRFSITSQSG 631
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 435 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARTAAAAAFEIDPRSGLIS 493
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 494 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 553
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 554 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 599
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 963 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1022
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1023 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1082
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1083 VAQITAVDPDEGPNAHIMYQIVDGNIPELFQMDIFSGEL 1121
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 547 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 603
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 604 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPL 663
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 664 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 703
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ N D G+ P DQV
Sbjct: 874 VVVISASDDDVGENARITYFLEDNLPQFRINADSGAITLQAPLDYEDQVTYTLAITARDN 933
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 934 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 993
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 994 QYTFQNGEDGDGDFTIEPTSG 1014
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 758 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 815
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 816 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 873
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ N D G+ +L
Sbjct: 874 VVVISASDDDVGENARITYFLEDNLPQFRINADSGAITL 912
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID + L
Sbjct: 327 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQTGLIRTAA 386
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 387 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 446
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 447 YPILQLRATDGDAPPNANLRYRF-VGPPAARTAAAAAFEIDPRSG 490
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1083 VAQITAVDPDEGPNAHIMYQIVDGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1142
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1143 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGVIGRIPAYDPDV--S 1200
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1201 DHLFYSFERGNELQLLVVNQTSGEL 1225
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 546 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARSAAAAAFEIDPRSGLIS 604
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 605 TSGRVDREHMENYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 664
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 665 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 710
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS-------- 56
+Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1073 LYTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRR 1132
Query: 57 ---------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1133 LDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPIFPAEEFEVRVKENSIVGS 1192
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1193 VVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1232
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 658 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLD 717
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y++ IQV ++ND+ P+ + + ++EN
Sbjct: 718 FEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLGHS 777
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 778 VIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 814
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 985 VVVISASDDDVGENARITYFLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1044
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + +Y + E+ ++Q++A+D D + R+
Sbjct: 1045 GIPQKADTTYVEVMVNDVNDNAPQFVTSLYTGLVSEDAPPFTSVLQISATDRDAHANGRV 1104
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 1105 QYTFQNGEDGDGDFTIEPTSG 1125
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 869 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 926
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 927 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 984
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 985 VVVISASDDDVGENARITYFLEDNLPQ--FRIDADSGAI 1021
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 438 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 497
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 498 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 557
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 558 YPILQLRATDGDAPPNANLRYRF-VGPPAARSAAAAAFEIDPRSG 601
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1194 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1253
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1254 SAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1311
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1312 DHLFYSFERGNELQLLVVNQTSGEL 1336
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 329 YRETLRENVEEGYPILQLRATDGDAPPNANLHYRF-VGPPAARTAAAAAFEIDPRSGLIS 387
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 388 TSGRVDREHMESYELVVEASDQGKEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 447
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 448 DVHPHTVVLRVTATDRDKDANGLVHYNIISGNSHGHFAIDSLTGEI 493
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 857 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 916
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 917 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 976
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 977 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1015
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 441 YVAQVREDVHPHTVVLRVTATDRDKDANGLVHYNIISGNSHGHFAID---SLTGEIQVVA 497
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 498 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 557
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 558 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 597
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 768 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 827
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 828 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 887
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 888 QYTFQNGEDGDGDFTIEPTSG 908
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 652 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 709
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 710 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 767
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 768 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 804
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 221 YQTLVPENEAAGTAVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAA 280
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 281 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 340
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 341 YPILQLRATDGDAPPNANLHYRF-VGPPAARTAAAAAFEIDPRSG 384
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q YLI
Sbjct: 977 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEACQEYLIVVQAT 1036
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N S P I ++ A D D+
Sbjct: 1037 SAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNHSDTFPSGIIGRIPAYDPDV--S 1094
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1095 DHLFYSFERGNELQLLVVNQTSGEL 1119
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
+ ++EN ++ + A D D + R+ Y ++ P++ F I+ + ++G D
Sbjct: 547 FQVSVLENAPLGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLD 606
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y + V +VNDN P Y+ ++ E+ + +
Sbjct: 607 RESVEHYFFGVEARDHGSPLLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSV 666
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V + A D D + ISY+I+ GN + F I G
Sbjct: 667 VSVTAV--DRDANSAISYQITGGNTRNRFAISTQGG 700
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 854 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 913
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 914 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 973
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 974 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1008
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 484
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNQTSGEL 1219
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG--- 60
Y I EN PI+QL A+D D + I Y+ SA + F ID S L
Sbjct: 605 YRETIRENVEEGYPILQLRATDSDSPSNANIRYRFVGDSATMARAAFEIDPRSGLITTRG 664
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V + NDNVP + Y + EN
Sbjct: 665 SVDRETNEHYTLQVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKENVR 724
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + + Y I +GN F+ID +G +
Sbjct: 725 PHSEILRVSATDRDKDSNAVVHYNIISGNSRGQFSIDSVTGEI 767
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN---------PES----- 48
L P Y + E+ I+Q++A+D D + R+ Y G P+S
Sbjct: 1127 LSPRYQGTVSEDAPSYTSILQISATDRDAHANGRVQYTFQNGEDGGGDFTIEPKSGIVRN 1186
Query: 49 ----------YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
++ + + G P Q + + + V +VNDN P+ + + EN +
Sbjct: 1187 SRRLDRENVPFYELTAYAVDRGVPSQQTPVHIQVTVLDVNDNAPVFPADDFEVLVKENSA 1246
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + +I Y+I GN F +DI SG L
Sbjct: 1247 VGSVVAQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 1289
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y + EN I++++A+D D D + + Y I +GN F+ID + + L
Sbjct: 715 YVVAVKENVRPHSEILRVSATDRDKDSNAVVHYNIISGNSRGQFSIDSVTGEIQVVAPLD 774
Query: 60 GGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y IV +QV +VNDN P+ + + A ++E+
Sbjct: 775 YEAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASVLESAPIGSS 834
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y+++ + ++ F I+ +G
Sbjct: 835 ILHIQAIDTDSGDNARLEYRLTGTSSDTPFVINAATG 871
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 30/145 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + E+Q IV ++A+D D+ + RI+Y + P+ F ID
Sbjct: 1028 YSVSVNEDQPPGSTIVVISATDDDVGENARITYFLEDNIPQ--FRIDPATGAITLQAELD 1085
Query: 54 ----------IGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
I + G P D Y V + V +VNDN P L P Y + E+
Sbjct: 1086 YEDQMTYTLAITAKDNGIPQKSDTTY--VEVNVNDVNDNAPQFLSPRYQGTVSEDAPSYT 1143
Query: 101 PIVQLAASDGDLDPDQRISYKISAG 125
I+Q++A+D D + R+ Y G
Sbjct: 1144 SILQISATDRDAHANGRVQYTFQNG 1168
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ A ++E+ I+ + A D D + R+ Y+++ + ++ F I+ +
Sbjct: 821 FQASVLESAPIGSSILHIQAIDTDSGDNARLEYRLTGTSSDTPFVINAATGWVTVKSILD 880
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V I V +VNDN P L YY ++ E+ + +
Sbjct: 881 RESVEHYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEYYVRLNEDAAVGTSV 940
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V + A D D+ + ++Y+I+ GN + F I
Sbjct: 941 VTVTAVDRDV--NSAVTYQITGGNTRNRFAI 969
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 5 PVYYAQ----IVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--- 56
PV+ A +V+ S + +V Q+ A+D D + +I Y+I GN F +DI S
Sbjct: 1230 PVFPADDFEVLVKENSAVGSVVAQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 1289
Query: 57 ----DLTGGPDQVYLIVY--------------IQVQNVNDNVPMTLD-PVYYAQIVENQS 97
DL Y+IV I++ + NDN P D + + V N+S
Sbjct: 1290 TSLIDLDYETRNEYVIVVQATSAPLVSRATVRIRLVDQNDNRPTLQDFQIIFNNFVSNRS 1349
Query: 98 GILP---IVQLAASDGDLDPDQRISYKISAGN 126
P I ++ A D D+ R+ Y I GN
Sbjct: 1350 NSFPTGVIGRVPAHDPDV--SDRLYYTIDRGN 1379
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos
taurus]
Length = 3314
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 436 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAADAFEIDPRSGLIS 494
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 495 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 554
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 555 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 600
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 964 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1023
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1024 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1083
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1084 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1122
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 548 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 604
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 605 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPL 664
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 665 GHSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATG 704
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 861 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDTDSGAITLQAPLDYE 920
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 921 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 980
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 981 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1015
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y A + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 328 YQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTEA 387
Query: 60 ----GGPDQVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ YL +V + V + ND+ P+ Y + EN
Sbjct: 388 ALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 447
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P F ID SG
Sbjct: 448 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAADAFEIDPRSG 491
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 759 YHLRLNEDATVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 816
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 817 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 874
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 875 VVVISASDDDVGENARITYLLEDNLPQ--FRIDTDSGAI 911
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1084 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYIIVVQAT 1143
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1144 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1201
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1202 DHLFYSFERGNELQLLVVNQTSGEL 1226
>gi|326431776|gb|EGD77346.1| PRCDH1 protein [Salpingoeca sp. ATCC 50818]
Length = 9674
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT------ 59
+ A I E+ + ++ + A D DL ++ Y I +GN ++ F++D + +LT
Sbjct: 4782 FTASIPESTAAGSSLLTVLARDPDLGAGGQVRYSIVSGNDDAAFSLDRATGELTLSKMLD 4841
Query: 60 ---------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG P V I V +VNDN P+ + + A + E++ + +
Sbjct: 4842 YEAATTRDLQILASDGGTPPLTRSGSVRITVTDVNDNPPV-FEQAFVAHVAEDEVADVDL 4900
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VQ+ A D D + +I Y I AGN +++F+ID +G L
Sbjct: 4901 VQVQAVDADTGSNAQIVYSIVAGNEQNFFSIDAATGML 4938
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 31/141 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y +VEN + A G +P + Y I+ G+PE F+I + LTG
Sbjct: 1524 PTYSFTVVENDAAASVGTVEALVAGSSNPS--VIYTIAQGDPEGLFSIHANTGVLSLTGA 1581
Query: 62 ------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
D+ IV I V +VNDN P P+Y + E SG P
Sbjct: 1582 LDRETVPTYTLVVKGTLNSDEATTIVQIVVGDVNDNAPFMQFPLYTLSLAECTSGACPTG 1641
Query: 104 QLAAS--------DGDLDPDQ 116
LA S D D P Q
Sbjct: 1642 ALALSPTAKPVAVDADATPPQ 1662
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 29/159 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y + E S I L A DGD DPD + Y I + F+ID + S L
Sbjct: 1423 TYAVTVSETTSIGTTIAVLTAIDGD-DPDLPLFYSID--DQSGTFSIDEASGAVTVASTL 1479
Query: 59 TGGPDQVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + + V + V + DNVP+ P Y +VEN +
Sbjct: 1480 PGAPSVLSMTVTAADSPDANAKTGSAQLIVTVADPTDNVPLFASPTYSFTVVENDAAASV 1539
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A G +P + Y I+ G+PE F+I +G L
Sbjct: 1540 GTVEALVAGSSNPS--VIYTIAQGDPEGLFSIHANTGVL 1576
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 35/149 (23%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF---------------NIDIGS--------- 56
++QL A+D D ++Y+I+ GN F N D+ S
Sbjct: 3859 LLQLQATDADCR--DAVTYRITGGNSNGLFAINRETGELAVVQPLNADVSSGGAAQHTLT 3916
Query: 57 -----DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
D P V + V NVN P+ Y ++ S +V + A+D D
Sbjct: 3917 VAATDDFASSPRTSTATVLVTVLNVNQYAPV-FAATYSGTFADSVSTGTELVLVGATDAD 3975
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
D I+Y I++GN + F ID +GSL
Sbjct: 3976 GD---NIAYAITSGNTGNVFAIDAVTGSL 4001
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGN 126
V ++V +VND+ P+ P +Y++ + I+ + A+D D P R++Y I +GN
Sbjct: 5084 VIVEVLDVNDHSPVFSVPDFYSRRLPEGDAFNDTVILNITATDADNSPASRVTYAIVSGN 5143
Query: 127 PESYFNIDIGSGSL 140
+ F +D +G+L
Sbjct: 5144 VDDTFELDADTGAL 5157
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
V + V + NDN PM Y I E++ P+ + S LDPDQ +++Y I++
Sbjct: 2239 VTVNVLDENDNAPMFDRTNYTVTIAESK----PVERTFLSIVALDPDQGANAQVNYSIAS 2294
Query: 125 GNPESYFNIDIGSGSL 140
G+P F +D +G L
Sbjct: 2295 GDPNGVFELDSATGGL 2310
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGN-----------------------PESYFNIDIGSD 57
I+ + A+D D P R++Y I +GN S F++++ +
Sbjct: 5119 ILNITATDADNSPASRVTYAIVSGNVDDTFELDADTGALWLRKSLDFETRSQFSLNVSAS 5178
Query: 58 LTGGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+G P Y+ I V +VNDN P+ Y + E+ S +QL A++ D
Sbjct: 5179 DSGTPVHTTYITAIIFVADVNDNAPVFNQTSYEVHVSEDASVGDLALQLVATERDTVA-T 5237
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y I+ G+ F I+ +G++
Sbjct: 5238 TVMYSIALGS-RGDFAINASTGAI 5260
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
V QS + ++QL G LD D S+ ++ +T G +V +
Sbjct: 514 VSVQSNAVVVLQLT---GALDYDTVTSHTVTI-------------QVTDGVHTAQAVVTV 557
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQ-SGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
QV +VNDN P+ Y ++ EN +G + ++ + A+D D + R++Y ++ P +
Sbjct: 558 QVLDVNDNSPVFERESYATRVAENSDTGTIALI-VTATDADSGENGRVTYALTP--PSTD 614
Query: 131 FNID 134
F ID
Sbjct: 615 FAID 618
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 62 PDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
PD + ++V + + +VN+ P P+Y +VE + +P +Q+ A+D D I+
Sbjct: 2658 PDPAFDSVVVKVTILDVNEFDPAFSLPLYSVSVVETLAQGMPFLQVEATDSDACDTCHIT 2717
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I G+ F I+ +G +
Sbjct: 2718 YSIVDGDDAGVFAINTTTGEI 2738
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
+ + A + E++ + +VQ+ A D D + +I Y I AGN +++F+ID + +
Sbjct: 4882 FEQAFVAHVAEDEVADVDLVQVQAVDADTGSNAQIVYSIVAGNEQNFFSIDAATGM 4937
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 53 DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
DI ++ G D + I + +VNDN P+ +Y ++ E+ + V + A D D
Sbjct: 126 DITVSVSDGVDSTTGRILIAITDVNDNSPVFNQDLYTMKVAEDLEADVTFVSVKAVDVDA 185
Query: 113 DP-DQRISYKISAGNPESYFNIDIGSG 138
+ R++Y I G+P+ F I SG
Sbjct: 186 STQNSRVTYFIIGGDPDGIFQIATVSG 212
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 35/157 (22%)
Query: 7 YYAQIVENQ-SGILPIVQLAASDGDLDPDQRISYKIS----------------------A 43
Y ++ EN +G + ++ + A+D D + R++Y ++ A
Sbjct: 574 YATRVAENSDTGTIALI-VTATDADSGENGRVTYALTPPSTDFAIDATTGVVTTLTVFDA 632
Query: 44 GNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVY----YAQIV-ENQS 97
+ FN+ + + G P + + I + NVND LDPV+ Y Q + E+
Sbjct: 633 EAISTSFNLVVTATDHGVPARTDTATLTISIANVND-----LDPVFSQDRYNQYLPESTE 687
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++Q+ A++ D + R+ Y I+ GN ++ F ID
Sbjct: 688 TNRFVIQVVAAENDQGSNSRVQYNITNGNDDNMFRID 724
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
Y A + E + ++ + A DGD + + Y I+ GN + ID
Sbjct: 4569 YSADVQETIAAGTTVLTVEAVDGDRTQARPVRYTITTGNALGRWAIDTVTGAITSTQALC 4628
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G+ TGG + V + V NVN++ P + E +
Sbjct: 4629 AADQSVYTLTVVASEGAFGTGG-QSTSVTVTLTVLNVNNHAPQFPVATLQLNVSEGAADG 4687
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +AA+D D ++Y I +GN F ID +G
Sbjct: 4688 HVVTTVAATDADCGDTAALTYSIVSGNVADAFAIDPSTG 4726
>gi|432857205|ref|XP_004068581.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Oryzias latipes]
Length = 2980
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT---- 59
Y QI E+++ I+QL A+D D + + + I +GN F ID + DL
Sbjct: 484 YVVQIPEDKTPNTEILQLTATDKDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSYLD 543
Query: 60 ----------------GGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + +V +QV +VNDN P+ + + A ++EN
Sbjct: 544 YEANKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYS 603
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y+++ P F+I+ +G
Sbjct: 604 IIHIQAVDADSGENSRLEYQLTETTPHFPFSINNSTG 640
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------ 46
DPV+ Q I EN ++ + A+DGD + I Y I N
Sbjct: 368 DPVFEQQDYKESIRENLEIGYEVLTVRATDGDAPANGNILYHILNSNGSNDVFEIDSRSG 427
Query: 47 -------------ESYFNI----DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
E+YF + D G D GP V+I V++ NDN P + Y
Sbjct: 428 VIRTKGLVDREELEAYFLLVEANDQGRD--PGPRSATATVHILVEDDNDNAPQFSEKRYV 485
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
QI E+++ I+QL A+D D + + + I +GN F ID +G +
Sbjct: 486 VQIPEDKTPNTEILQLTATDKDRGSNAVVHFSIMSGNTRGQFYIDAQTGKM 536
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL- 58
+ A ++EN I+ + A D D + R+ Y+++ P F+I+ + ++L
Sbjct: 590 FQATVLENVPLGYSIIHIQAVDADSGENSRLEYQLTETTPHFPFSINNSTGWIVVAAELD 649
Query: 59 ----------TGGPDQVYLI------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D Y + + + + +VNDN P YY ++ E+ + +
Sbjct: 650 RESVDFYNFGVEARDHGYPVMSSSASISMTILDVNDNNPEFTQKAYYMRLNEDAAVGTSV 709
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V ++A D D+ + ++Y+IS+GN + F+I SG
Sbjct: 710 VTVSAVDQDI--NSVVTYQISSGNTRNRFSITSQSG 743
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
YY ++ E+ + +V ++A D D++ ++Y+IS+GN + F+I + +GG
Sbjct: 695 YYMRLNEDAAVGTSVVTVSAVDQDIN--SVVTYQISSGNTRNRFSI---TSQSGGGLITL 749
Query: 63 --------DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
++ Y++ VY+ V + N + P+ Y I E++
Sbjct: 750 ALPLDYKLERQYVLTVTASDGTLFDTAQVYVNVTDANTHRPVFQSSHYTVNINEDRPLGT 809
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D+ + RI+Y + P+ F+ID +G++
Sbjct: 810 TVVVISATDEDIGENARITYFMDDNVPQ--FDIDSDTGAV 847
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
I+E+ SGI+ ++ LD + Y + A F +D G P + ++
Sbjct: 945 IIESTSGIVRTLR------RLDRENVPVYNLQA------FAVDKGVPALKTP----VNIH 988
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ + + EN L + ++A+D D + +I Y+I GN
Sbjct: 989 VTILDVNDNPPVFEKDEFDIMVEENSPIGLVVGHISATDPDEGSNAQIMYQIVEGNIPEV 1048
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1049 FMLDIFSGEL 1058
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++ +V ++A+D D+ + RI+Y + P+ + D G+ T
Sbjct: 797 YTVNINEDRPLGTTVVVISATDEDIGENARITYFMDDNVPQFDIDSDTGAVTTQMELDYE 856
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y ++E+ +
Sbjct: 857 DQLSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNSPRFLRDHYVGSVMEDVPVFTSV 914
Query: 103 VQLAASDGDLDPDQRISYKISAG 125
VQ++A D D + R+ Y G
Sbjct: 915 VQVSAIDRDSGLNGRVFYTFQGG 937
>gi|405950714|gb|EKC18683.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Crassostrea gigas]
Length = 927
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + NDN P L+ Y ++E I +L A D D P+Q+I+YKI+ GN ESY
Sbjct: 159 VTVLDFNDNTPFFLNESYVFNVIEQNYSQTQIGRLYAKDLDAGPNQKITYKITRGNAESY 218
Query: 131 FNIDIGSGSL 140
F+I +GSL
Sbjct: 219 FHISDVNGSL 228
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSDL--T 59
L+ Y ++E I +L A D D P+Q+I+YKI+ GN ESYF+I D+ L
Sbjct: 172 LNESYVFNVIEQNYSQTQIGRLYAKDLDAGPNQKITYKITRGNAESYFHISDVNGSLFIN 231
Query: 60 GGPDQVYLIVYIQVQNVNDN 79
G D+ + Y V +NDN
Sbjct: 232 GNIDRETMSNYELVVTINDN 251
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 22/131 (16%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--LTGGPDQVYLIV 69
++N++G++ + G+LD +++ S++I+ D G T PD +
Sbjct: 444 IDNKTGVITLT------GNLDREEKSSFRINVKCT------DHGEPPLSTTSPD-----I 486
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
IQV +VNDN P L V I ENQ+ I + +++A D D I Y I G +
Sbjct: 487 IIQVIDVNDNPPEFLTNVTKVNIKENQTEI-NVTKVSAVDK--DSMAVIQYAIKGGMFSN 543
Query: 130 YFNIDIGSGSL 140
+FNI + SG +
Sbjct: 544 FFNISVSSGEI 554
>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
Length = 4521
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + AG + F+I D G T P
Sbjct: 1176 VHQGQVQENSPSGTQVMIVAARDDDSGLDGELQYSLRAGTSLAAFSINQDTGMIQTMAPL 1235
Query: 63 DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ + VYI+V +VNDN P PV+Y I+E+
Sbjct: 1236 DREFASYYWLTVLAVDKGSVPLSSVTEVYIEVMDVNDNPPRMSRPVFYPSILEDAPSGTS 1295
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D + ++++ I++GN +F I +G L
Sbjct: 1296 VLQLEAWDPDSISEGKLTFNITSGNHMGFFAIHPFTGLL 1334
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 31 LDPDQRISYKISAGNPE--SYFNIDIGSD-LTGGPDQVYLI-VYIQVQNVNDNVPMTLDP 86
LDPD I A + E ++ I + + L G D V L+ V IQV++VNDN P+
Sbjct: 2922 LDPDTGILKVRKAMDHEFTKWYQIYVMAHCLHNGTDLVSLVSVNIQVKDVNDNRPIFEAD 2981
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGSG 138
Y A + EN ++Q+ A+D D D ++SY++S N F ID SG
Sbjct: 2982 PYKAVLTENMPVGTSVIQVTANDQDTGRDGQVSYRLSGEPGSNVHELFTIDSKSG 3036
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2353 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2409
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2410 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTP 2469
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I N +F I+ +G +
Sbjct: 2470 VIQLLASDQDSGKNRDVSYQIVEDGSNVSKFFQINGSTGEM 2510
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y ++ GN E F+I++ + L
Sbjct: 873 PLARLAATDPDAGFNGKLVYVVADGNEEGCFDIELETGLLTVAAPLDYETTSFYVLNITV 932
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 933 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELKTKDADSEDN 992
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 993 GRVRYTLLS--PTEKFSLHPLTGEL 1015
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSDL-- 58
DP Y A + EN ++Q+ A+D D D ++SY++S N F ID S
Sbjct: 2981 DP-YKAVLTENMPVGTSVIQVTANDQDTGRDGQVSYRLSGEPGSNVHELFTIDSKSGWIT 3039
Query: 59 --------TGGPDQVYLIVY---------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
T + Y++ Y + + + NDN P Y ++EN
Sbjct: 3040 TLQELDCETHQTHRFYVVAYDHGQPTQLSSQALVEVSITDENDNAPRFASEDYRGSVIEN 3099
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F I
Sbjct: 3100 SEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGI 3138
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGPDQVYLIVYIQ--------------- 72
G DP+ +++ +P S + +G DL+ GP Q L V ++
Sbjct: 1666 GSQDPESASLFQL---DPSSGVLVTVGKLDLSSGPSQHTLTVMVRDQEMPIKRNFVWVTI 1722
Query: 73 -VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
V++ N + P Y A + + + ++Q+ A+D D + + Y + GN E +F
Sbjct: 1723 YVEDGNLHPPHFTQLHYEASVPDTTAPGTELLQVRAADSDRGANAEVHYSLLKGNSEGFF 1782
Query: 132 NID 134
NI+
Sbjct: 1783 NIN 1785
>gi|345493993|ref|XP_003427197.1| PREDICTED: LOW QUALITY PROTEIN: neural-cadherin-like [Nasonia
vitripennis]
Length = 3062
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1376 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1430
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y IV I V++VNDN P+ P Y QI E LP
Sbjct: 1431 GALDYETRKRYELKLTASDNLKENYTIVVIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1490
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ ASDGD D Q I Y ++ NP S F+I+ SG +
Sbjct: 1491 KRVLQVTASDGDQDRPQSIVYFLTGQGIDPDNPANSKFDINRTSGEI 1537
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGS 56
P Y QI E LP ++Q+ ASDGD D Q I Y ++ NP S F+I+ S
Sbjct: 1475 PTYRTQITEEDDRNLPKRVLQVTASDGDQDRPQSIVYFLTGQGIDPDNPANSKFDINRTS 1534
Query: 57 -----------DLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1535 GEIYVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPLFPQGVYF 1594
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP + + K+
Sbjct: 1595 GNVTENGTAGMVVMTMTAVDYD-DPHEGTNAKL 1626
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------------------ 41
YY ++ E + P++++ A+D D + ++ Y I
Sbjct: 924 TYYPKVEEGATNGSPVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGQVSTNK 983
Query: 42 ---SAGNPESYFNIDIGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQS 97
G+ + ++ + + G P + + +++ +VNDN P+ Y + ++ S
Sbjct: 984 VFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDAS 1043
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
I++++ASD D D + I Y +SA N E YF I SG +
Sbjct: 1044 IGTNILRVSASDEDADNNGAIVYSLSAPNDEKGLEYFEIQPESGWI 1089
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1349 GQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQHTVLTVTAKDH--DESSRIR 1406
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1407 YEITSGNIGGAFAVKNMTGAI 1427
>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Pan troglodytes]
Length = 3087
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
Length = 5078
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
I+ + A+D D P+ + YKIS+GN +S F+++ +
Sbjct: 3156 ILTIKATDDDDGPNGMVEYKISSGNEDSKFHLNSTTGALKILKPLDYDTVSNYHLNVTAT 3215
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL P Q +V I + +VNDN P VY A I EN I Q+ A D D +
Sbjct: 3216 DLGFEPHQATAMVTISLTDVNDNPPTFNQSVYKAYIPENSPPKTFIFQVQAHDIDSPKNA 3275
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I Y I G + F ID +G++
Sbjct: 3276 IIHYSIIRGTGKDVFTIDSKTGTI 3299
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLT 59
Y QI E + ++++ A+D D + + Y I+ GN E F+I+ G+ DL
Sbjct: 1234 YKVQISEGSTLETQVLRVYATDIDEGVNGEVYYSIAMGNEEQKFSIEQGTGQITLIKDLD 1293
Query: 60 GGPDQVYLIVYIQ----VQNV--------------NDNVPMTLDPVYYAQIVENQSGILP 101
Y++ I VQN NDN P + ++ + E
Sbjct: 1294 RETTSRYVLTVIAEDGAVQNKLSVSTTVVIDILDENDNAPEFVQTMFEISVPETTPVNTK 1353
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q A D D+ + IS+ I AGN F+ID SG+L
Sbjct: 1354 LTQFKAIDMDIGINSEISFSIGAGNRRDTFHIDPTSGTL 1392
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 23/149 (15%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES----------YFNIDIG-- 55
+ ++ EN L + A D D P+ R + ++ E Y N I
Sbjct: 918 FVEVNENSPVGLEVYHSIAKDLDSGPNSRFKFNLTKNAQERFRINEATGVIYLNRKINDD 977
Query: 56 -----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+D P V I +++VND+ P+ Y ++E+ +
Sbjct: 978 PGTLIPIEVTVTDFGKPPLMSKQTVVISIKDVNDHTPVFDHTSYETSLLESTRVNKRFFR 1037
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L ASD DL + +SY+IS GN E F I
Sbjct: 1038 LVASDADLGLNGLVSYEISEGNFEGKFGI 1066
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------------------ 48
Y ++E+ +L ASD DL + +SY+IS GN E
Sbjct: 1021 YETSLLESTRVNKRFFRLVASDADLGLNGLVSYEISEGNFEGKFGIFPDGYLYVKSSLDR 1080
Query: 49 ----YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
Y+++ + + +G P + + V I V + NDN P + + ++EN+ +
Sbjct: 1081 EERDYYSLIVTARDSGEPSRSSTVSVVIHVIDENDNPPEFTNSTFTFHVLENEPPDSFVG 1140
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+L+A+D D+ + + + S NP++ F ID +G
Sbjct: 1141 KLSATDRDIGRNAELIF--SFANPQNEFIIDPKNG 1173
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 21 IVQLAASDGDLDPDQRISYKISA--GNPESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVN 77
I + + G++ + + YK +A +PE+ + + + +D P +V + + + N
Sbjct: 2965 IFTIDPASGEIFSKRPLRYKYTALEHSPENQYTLTVLATDNGKPPMSSECLVTVNIIDSN 3024
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDG-DLDPDQRISYKISAGNPESYFNIDIG 136
+N P Y++ + ++ I+Q+ A+D D + I Y IS GN +YFNI+
Sbjct: 3025 NNPPKFTKSQYFSSLPKSADYEQKILQVKATDEQDFGMNAEIDYSISGGNGSNYFNINEK 3084
Query: 137 SGSL 140
+G L
Sbjct: 3085 TGWL 3088
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+++ V + NDN PM DP +Y A I EN S ++Q++A+D D + ++ Y I +G+
Sbjct: 2166 IFVNVVDENDNSPM-FDPKHYSASIAENASIGASVLQVSATDVDEGLNGKVRYSIFSGDE 2224
Query: 128 ESYFNIDIGSG 138
F+I +G
Sbjct: 2225 NRDFSISEDTG 2235
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDP-DQRISYKISAGNPESYFNID-----------------------IGS 56
I + A D D+ P + + SY I GN E F ID IG+
Sbjct: 3471 ITTVKAIDKDVRPLNNQFSYSIINGNSEKAFKIDPQTGAIETAAELDREKIPAYTLIIGA 3530
Query: 57 DLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
TG P Q V I +++VNDN P P + EN+ ++ L A+D DL P+
Sbjct: 3531 IDTGVPPQTGTATVKIILEDVNDNEPFFDPPNIIGYVTENEPPNTSVLTLTATDPDLPPN 3590
Query: 116 QR-ISYKISAGNPESYFNIDIGSG 138
+Y ++ G + + ++ +G
Sbjct: 3591 GAPFNYFLTGGKDKDFVFVEKTTG 3614
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + ++NDN P+ L Y QI E + ++++ A+D D + + Y I+ GN E
Sbjct: 1215 VNVFIDDLNDNPPVFLTTPYKVQISEGSTLETQVLRVYATDIDEGVNGEVYYSIAMGNEE 1274
Query: 129 SYFNIDIGSGSL 140
F+I+ G+G +
Sbjct: 1275 QKFSIEQGTGQI 1286
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------IGSDLTGGPDQVY------ 66
I +L+A D RI Y I+ GN + I+ IG L +Y
Sbjct: 2628 ISKLSAVSSKSDSYDRIRYGIAGGNLKEAIKINSDSGEISVIGGKLDFETSPIYEVWVEA 2687
Query: 67 -----------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L + I V + NDN P+ +Y A I E + L + + A+D D + +
Sbjct: 2688 HYVDNSALRTVLQITINVTDTNDNPPVIEKQIYSANIYEEEYPPLKVCTIKATDLDSEQN 2747
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
ISY++ + + F+ID +G +
Sbjct: 2748 GEISYRL-INDSDGTFSIDEKNGDI 2771
>gi|324502384|gb|ADY41050.1| Cadherin-4, partial [Ascaris suum]
Length = 1195
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
D + A + EN ++ L A D D DPD + Y I G+ YF +D
Sbjct: 435 DIAHEASVYENMPVGTEVIALQAFDPD-DPDAAVKYAIVDGDGMGYFMVDPAGIVRTSIV 493
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D P + V+++V + NDN P+ +Y+A + EN
Sbjct: 494 LDREVESRYWLAIEAEDAASVPLSSIVHVFVRVLDKNDNAPLPSRAIYFASVPENSPEDT 553
Query: 101 PIVQLAASDGDLDPD----QRISYKISAGNPESYFNIDIGSG 138
+V++ A D D P + ++I++G+P+S+F++D +G
Sbjct: 554 VVVKVEAEDRDEPPSGEDRAELRFRIASGDPQSFFSVDPKTG 595
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 26/140 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y +I E+ + I+ L A+D D + RI+YK+ AG+ +++ ID
Sbjct: 220 PFYNVRIAEDIAIGSEILVLTATDEDFGDNARIAYKL-AGD-DAHVEIDNEKGILRVRNQ 277
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ D P ++ V I++ +VNDN P +P+ QI E+
Sbjct: 278 FDRETNEIYRFSVVAYDHGHPPKLTFVNVSIELDDVNDNAPKCAEPIQKVQIPEDYPNGA 337
Query: 101 PIVQLAASDGDLDPDQRISY 120
+ +AASD D + RI+Y
Sbjct: 338 LVTCVAASDADAGENGRITY 357
>gi|432891560|ref|XP_004075584.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3188
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y AQI ENQ ++ ++ASD D + +I+Y G F+I+ + +
Sbjct: 1596 YEAQISENQPAGTTVLTVSASDSDQGINGQITY---GGISHGAFSINSVTGVITTTKSLD 1652
Query: 60 ---------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG P+ V I+V +VNDN P+ Y ++ ENQ LP+
Sbjct: 1653 RESQDCYTVTVYAKDGGLPPNYAKATVKIKVVDVNDNAPIFGRLYYNVEVPENQEA-LPL 1711
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D I+Y+I+AG+P F++D SG L
Sbjct: 1712 FTLRATDPDAGSSGEINYRIAAGDPSGDFHLDRHSGVL 1749
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----------------------E 47
++E+Q+ ++ + A D D + R++Y+I +GN +
Sbjct: 1495 VMEDQTMGFVVLFVIARDADQGENGRVTYRIQSGNTRGTFSLNSNTGSLSISKPLDREEQ 1554
Query: 48 SYFNIDIGSDLTGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FN+ I ++ G P ++ I V +VND P+ + Y AQI ENQ ++ ++
Sbjct: 1555 DVFNLTIVAEDHGIPQHSSSQLLRIHVIDVNDETPLFEEAQYEAQISENQPAGTTVLTVS 1614
Query: 107 ASDGDLDPDQRISY 120
ASD D + +I+Y
Sbjct: 1615 ASDSDQGINGQITY 1628
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R +Y ++ E++ D GS + DQ+ L I VQ++NDN P+ Y+
Sbjct: 201 LDREKRSTYTLTL---EAF---DGGSPIR--TDQMTL--DITVQDINDNAPVFQQSRYHT 250
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
I EN I+Q+ ASD D + +SY+I+ +P+ YF ID SG
Sbjct: 251 IISENLQPGNSILQVFASDSDEGQNGMVSYEINRRQSDPDQYFVIDSHSG 300
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + NDN+P+ + P + ++E+Q+ ++ + A D D + R++Y+I +GN
Sbjct: 1475 VYVTDENDNLPVFMSPTAVS-VMEDQTMGFVVLFVIARDADQGENGRVTYRIQSGNTRGT 1533
Query: 131 FNIDIGSGSL 140
F+++ +GSL
Sbjct: 1534 FSLNSNTGSL 1543
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
I+ L D LD ++R +Y++ + +D P + I+V +VNDN
Sbjct: 408 IIYLVCVDQILDREERDTYELRV----------MATDSGSPPLRAESSFIIEVTDVNDNP 457
Query: 81 PMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDI 135
P+ PVY I E + P ++Q+ A D D P+ ISY I S+F+ID
Sbjct: 458 PLFDQPVYRQAIPEV---VFPGSFVLQVTARDKDQGPNGDISYSILKDQSVYHSWFSIDS 514
Query: 136 GSG 138
+G
Sbjct: 515 VTG 517
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 74 QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ NDN P Y + E + I+ L+ASD D P+ + Y IS+G+ F +
Sbjct: 2488 KDANDNPPAFSRTDYTVVLSEGTAAGTEILHLSASDPDSAPNGEVQYFISSGDETHLFQM 2547
Query: 134 DIGSGSL 140
D +G+L
Sbjct: 2548 DSWTGAL 2554
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 32/151 (21%)
Query: 5 PVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNP--ESYFNID------ 53
PVY I E + P ++Q+ A D D P+ ISY I S+F+ID
Sbjct: 463 PVYRQAIPEV---VFPGSFVLQVTARDKDQGPNGDISYSILKDQSVYHSWFSIDSVTGII 519
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ SD P +V I +Q++NDN P+ Y I EN
Sbjct: 520 TTSSQLDYEKNPNPSITVVASDGGNPPLSSTAVVNILLQDINDNEPVFERNFYNVSIKEN 579
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ I+++ A D D ++Y +++G+
Sbjct: 580 TAPGTCILEVTAVDADGGTFGSVTYSLASGS 610
>gi|410919675|ref|XP_003973309.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Takifugu rubripes]
Length = 2988
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ + I+Q+ A+D D + + + I +GN F ID + DL D
Sbjct: 481 YVVQVPEDMAPNTEILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLD 540
Query: 64 ----------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV +VNDN P+ + + A ++EN
Sbjct: 541 YETNKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYS 600
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y+++A P F+I+ +G
Sbjct: 601 IIHIQAVDADSGDNSRLEYRLTATTPNFPFSINNSTG 637
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-PESYFNIDIGSDLT------ 59
Y I EN ++ + A+DGD + I Y+I N F ID S +
Sbjct: 373 YKENIRENLEIGYEVLTVRATDGDAPVNGNILYRIINSNGSNDVFEIDSRSGVIRTKGLV 432
Query: 60 --------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 433 DREQVEAYMLLVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDMAPN 492
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + + + I +GN F ID +G +
Sbjct: 493 TEILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKM 533
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL- 58
+ A ++EN I+ + A D D + R+ Y+++A P F+I+ + ++L
Sbjct: 587 FQATVLENVPLGYSIIHIQAVDADSGDNSRLEYRLTATTPNFPFSINNSTGWIVVAAELD 646
Query: 59 ----------TGGPDQVY------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DQ Y + + V +VNDN P YY ++ E+ + +
Sbjct: 647 RESVDFYNFGVEARDQGYPIMSSSASISMTVLDVNDNNPEFTQKAYYMRLNEDAAVGTSV 706
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V ++A D D+ + ++Y+IS+GN + F+I SG
Sbjct: 707 VTVSAVDQDI--NSVVTYQISSGNTRNRFSITSQSG 740
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
YY ++ E+ + +V ++A D D++ ++Y+IS+GN + F+I + +GG
Sbjct: 692 YYMRLNEDAAVGTSVVTVSAVDQDIN--SVVTYQISSGNTRNRFSI---TSQSGGGLITL 746
Query: 63 --------DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
++ Y++ V++ V + N + P+ Y I E++S
Sbjct: 747 ALPLDYKLERQYVLTVTASDGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINEDRSVGT 806
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D + RI+Y + P+ F+ID +G++
Sbjct: 807 TVVLISATDEDTGENARITYFMDDSIPQ--FDIDPDTGAV 844
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++S +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 794 YTVNINEDRSVGTTVVLISATDEDTGENARITYFMDDSIPQFDIDPDTGAVTTQMELDYE 853
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y ++E+ +
Sbjct: 854 DQVSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNSPRFLRDHYTGSVMEDVPVFTSV 911
Query: 103 VQLAASDGDLDPDQRISY 120
VQ++A+D D + R+ Y
Sbjct: 912 VQVSATDRDSALNGRVFY 929
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
I+E+ SGI+ ++ LD + Y + A F +D G P + ++
Sbjct: 942 IIESTSGIVRTLR------RLDRENVPVYSLQA------FAVDKGVPALKTP----VNIH 985
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ + EN L + ++A+D D + +I Y+I GN
Sbjct: 986 VTILDVNDNPPVFEKDELDIMVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEV 1045
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1046 FQLDIFSGEL 1055
>gi|12965351|gb|AAK07670.1| cadherin 23 [Mus musculus]
Length = 3322
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 1002 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1061
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1062 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1121
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1122 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1162
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 541 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 600
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 601 YSIVNASAFGSYFDISIYEG 620
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1501 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1560
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1561 GINSVLSYYITEGNEDMTFRMDRISGEIA 1589
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1536 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1595
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1596 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1655
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1656 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1693
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 898 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 957
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 958 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1017
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1018 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1048
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1818 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1877
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1878 ASDADSGCNALLTFNITAGNRERAFFINATTG 1909
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 569 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 628
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 629 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 688
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 689 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 731
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2075 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2134
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2135 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2194
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2195 IIANVTAIDLDLNP--KLEYHI 2214
>gi|60417438|emb|CAI59611.1| cadherin 23 [Mus musculus]
Length = 3352
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1057 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1111
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1112 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1157
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 596 YSIVNASAFGSYFDISIYEG 615
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1688
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2190 IIANVTAIDLDLNP--KLEYHI 2209
>gi|358001060|ref|NP_001239564.1| cadherin-23 isoform 2 precursor [Mus musculus]
Length = 3352
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1057 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1111
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1112 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1157
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 596 YSIVNASAFGSYFDISIYEG 615
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1688
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2190 IIANVTAIDLDLNP--KLEYHI 2209
>gi|124517680|ref|NP_075859.2| cadherin-23 isoform 1 precursor [Mus musculus]
gi|148700222|gb|EDL32169.1| cadherin 23 (otocadherin), isoform CRA_c [Mus musculus]
Length = 3354
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1159
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 598 YSIVNASAFGSYFDISIYEG 617
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1690
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1045
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFFINATTG 1906
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2072 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2131
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2132 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2191
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2192 IIANVTAIDLDLNP--KLEYHI 2211
>gi|341940299|sp|Q99PF4.2|CAD23_MOUSE RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
Length = 3354
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1159
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 598 YSIVNASAFGSYFDISIYEG 617
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1690
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1045
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFFINATTG 1906
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2072 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2131
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2132 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2191
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2192 IIANVTAIDLDLNP--KLEYHI 2211
>gi|148700220|gb|EDL32167.1| cadherin 23 (otocadherin), isoform CRA_a [Mus musculus]
Length = 3319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1119 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1159
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 598 YSIVNASAFGSYFDISIYEG 617
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1690
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1045
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFFINATTG 1906
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2072 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2131
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2132 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2191
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2192 IIANVTAIDLDLNP--KLEYHI 2211
>gi|12330560|gb|AAG52817.1|AF308939_1 cadherin-related 23 protein [Mus musculus]
Length = 3354
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1159
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 598 YSIVNASAFGSYFDISIYEG 617
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1690
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1045
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFFINATTG 1906
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2072 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2131
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2132 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2191
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2192 IIANVTAIDLDLNP--KLEYHI 2211
>gi|60417434|emb|CAI59609.1| cadherin 23 [Mus musculus]
Length = 3283
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1057 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1116
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1117 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1157
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 596 YSIVNASAFGSYFDISIYEG 615
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1688
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2190 IIANVTAIDLDLNP--KLEYHI 2209
>gi|60417436|emb|CAI59610.1| cadherin 23 [Mus musculus]
Length = 3267
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1057 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1116
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1117 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1157
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 596 YSIVNASAFGSYFDISIYEG 615
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1688
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2190 IIANVTAIDLDLNP--KLEYHI 2209
>gi|347543903|gb|AEP02524.1| CDH23, partial [Hipposideros larvatus]
Length = 3276
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 991 VYNVSVSEDVPRDFRVVWLNCTDNDIGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1050
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D ++ V+I V +VNDN P+ L Y A + E+
Sbjct: 1051 DRETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEG 1110
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN ++F ID+ SG L
Sbjct: 1111 HSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSGLL 1151
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN ++F ID+ S L
Sbjct: 1099 YEASVPEDIPEGHSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSGLLMRGPRPL 1158
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1159 DREQDASHVLTVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1218
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D P ++Y+I +G E F ID +G
Sbjct: 1219 SVLVVRATDRDTGPGGLVTYRILSG-AEGKFEIDESTG 1255
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 530 GGGEETTGRVRINVLDVNDNVPTFQKDAYMGALRENEPSVTQLVRLRATDEDSPPNNLIT 589
Query: 120 YKIS-AGNPESYFNIDIGSG 138
Y I A + SYF+I + G
Sbjct: 590 YSIVFASSFGSYFDISVYEG 609
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1745 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDR 1803
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ + EN +
Sbjct: 1804 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTVSENSPVSSFVA 1863
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + +++ I+AGN E F I+ +G
Sbjct: 1864 HILASDADSGCNALLTFNITAGNRERAFAINATTG 1898
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A+D D + +SY++ G P F I+
Sbjct: 887 FVAEVLEGTPAGVSVYQVVATDLDEGLNGLVSYRMQVGMPRLDFLINSTSGVVVTTTELD 946
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 947 RERIGEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1006
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1007 VWLNCTDNDIGLNAELSYFITGGNVDGKFSV 1037
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 36/147 (24%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ + ASD D + +++ I+AGN E F I+ + +
Sbjct: 1862 VAHILASDADSGCNALLTFNITAGNRERAFAINATTGIVTVNRPLDRERIPQYRLTISVK 1921
Query: 60 --------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AA 107
D +L++++ +N DN P+ + Y+A+++EN PI L A
Sbjct: 1922 DNPENPRIARRDFDFLLIFLADEN--DNHPIFTESTYHAEVMENSPAGTPITVLNGPILA 1979
Query: 108 SDGDLDPDQRISYKISAGNPESYFNID 134
D DLD ++Y++ G F+ID
Sbjct: 1980 LDADLDVYAVVTYQL-LGAQSGLFDID 2005
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1490 VASDCGTPPRKKDRILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVRATDRDI 1549
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D SG +
Sbjct: 1550 GINSVLSYYITEGNEDMTFRMDRISGEI 1577
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++T P
Sbjct: 1525 YNVSVNENVGGGTVVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEITTRPAPP 1584
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1585 DREHQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQKPHYEILLDEGPETINA 1644
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ + Y I AGN F+I+ +G
Sbjct: 1645 SLITVQALDLDEGPNGTVVYAIIAGNIIDTFHINKHTG 1682
>gi|347543911|gb|AEP02528.1| CDH23, partial [Hipposideros armiger]
Length = 3209
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDIGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1048
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D ++ V+I V +VNDN P+ L Y A + E+
Sbjct: 1049 DRETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEG 1108
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN ++F ID+ SG L
Sbjct: 1109 HSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSGLL 1149
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN ++F ID+ S L
Sbjct: 1097 YEASVPEDIPEGHSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSGLLMRGPRPL 1156
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1157 DREQDASHVLTVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1216
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D P ++Y+I +G E F ID +G
Sbjct: 1217 SVLVVRATDRDTGPGGLVTYRILSG-AEGKFEIDESTG 1253
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 528 GGGEETTGRVRINVLDVNDNVPTFQKDAYMGALRENEPSVTQLVRLRATDEDSPPNNLIT 587
Query: 120 YKIS-AGNPESYFNIDIGSG 138
Y I A + SYF+I + G
Sbjct: 588 YSIVFASSFGSYFDISVYEG 607
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A+D D + +SY++ G P F I+
Sbjct: 885 FVAEVLEGTPAGVSVYQVVATDLDEGLNGLVSYRMQVGMPRLDFLINSTSGVVVTTTELD 944
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 945 RERIGEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1005 VWLNCTDNDIGLNAELSYFITGGNVDGKFSV 1035
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1743 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDR 1801
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1802 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVA 1861
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + +++ I+AGN + F I+ +G
Sbjct: 1862 HILASDADSGCNALLTFNITAGNRDRAFAINATTG 1896
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1488 VASDCGTPPRKKDRILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVRATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D SG +
Sbjct: 1548 GINSVLSYYITEGNEDMTFRMDRISGEI 1575
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++T P
Sbjct: 1523 YNVSVNENVGGGTVVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEITTRPAPP 1582
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1583 DREHQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQKPHYEILLDEGPETINA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ + Y I AGN F+I+ +G
Sbjct: 1643 SLITVQALDLDEGPNGTVVYAIIAGNIIDTFHINKHTG 1680
>gi|402584837|gb|EJW78778.1| hypothetical protein WUBG_10313 [Wuchereria bancrofti]
Length = 574
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+SY+ D+ P L V+++V + ND++P++L P+Y++ I EN I ++
Sbjct: 100 DSYWLTIEACDMNPVPLCSVLHVFVRVLDRNDHIPLSLRPIYFSTIPENSPEDTVITKVE 159
Query: 107 ASDGDLDPDQR----ISYKISAGNPESYFNIDIGSG 138
A D D D+ I +KI +G+P+S+F ID +G
Sbjct: 160 AEDKDDFLDRHDITNIRFKIISGDPQSFFGIDSKTG 195
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 34/164 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR----ISYKISAGNPESYFNID--I 54
++L P+Y++ I EN I ++ A D D D+ I +KI +G+P+S+F ID
Sbjct: 135 LSLRPIYFSTIPENSPEDTVITKVEAEDKDDFLDRHDITNIRFKIISGDPQSFFGIDSKT 194
Query: 55 GSDLTGGP------------------DQVY------LIVYIQVQNVNDNVPMTLDPVYYA 90
G +T G DQ Y + V I + ++NDN+P Y
Sbjct: 195 GYIITRGKRRLDRETQKEHVIVVEICDQGYPKLCTTVSVVITITDLNDNLPSFKQTTYNF 254
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ ++ G L ++ A D D + R+ Y + +P F ID
Sbjct: 255 NVPADEIGEL--CRIFAMDIDEGQNARLLYNFTEADPR--FCID 294
>gi|157106163|ref|XP_001649196.1| cadherin [Aedes aegypti]
gi|108884132|gb|EAT48357.1| AAEL000597-PA [Aedes aegypti]
Length = 1743
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
+Y A++ EN+ ++ + A D D RI Y+I++GN F + G+ G
Sbjct: 66 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAVKNMTGAIYVAGAL 123
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
+ Y V I V++VNDN P+ P Y AQI E LP I
Sbjct: 124 DYETRKRYELRLAASDNLKENYTTVVIHVKDVNDNPPVFGRPTYQAQITEEDDRNLPKRI 183
Query: 103 VQLAASDGDLDPDQRISY-----KISAGNP-ESYFNIDIGSGSL 140
+Q+ A+DGD D Q I Y I NP S F+I+ SG +
Sbjct: 184 LQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTSGDI 227
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY-----KISAGNP-ESYFNID--- 53
P Y AQI E LP I+Q+ A+DGD D Q I Y I NP S F+I+
Sbjct: 165 PTYQAQITEEDDRNLPKRILQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTS 224
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 225 GDIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 284
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP++ + K+
Sbjct: 285 GNVTENGTAGMVVMTMTAVDYD-DPNEGTNAKL 316
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-----FNIDIGSDLTG- 60
Y + EN PI+QL A+DGD P+ + Y+ + F ID S L
Sbjct: 188 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPSAARAAAAAAFEIDPRSGLIST 247
Query: 61 -------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GP + V+I V + NDN P + Y AQ+ E+
Sbjct: 248 SGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRED 307
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 308 VRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 352
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 716 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 775
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 776 DREAMPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 835
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 836 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 874
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+
Sbjct: 613 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQATLDYE 672
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 673 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 732
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 733 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 767
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 836 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 895
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 896 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 953
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 954 DHLFYSFERGNELQLLVVNQTSGEL 978
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 511 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGIGLVTLALP 568
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D + V+I + + N + P+ Y + E++
Sbjct: 569 LDYKQERYFKLVLTASDRALHDHCH--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 626
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 627 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 663
>gi|156351334|ref|XP_001622464.1| predicted protein [Nematostella vectensis]
gi|156209012|gb|EDO30364.1| predicted protein [Nematostella vectensis]
Length = 2058
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------IGSDLTGGPDQVY 66
++Q++A+D DL+ ++ Y I+ G+ ++ + + ++ Y
Sbjct: 846 VIQVSATDQDLEYKGKVIYNITDGDENRKCEVEKLVRHYNWHKKNCVLCKESKCSVERTY 905
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+++Y V +VNDN P+ Y A ++EN P++++ ASD D + +I+YK++ GN
Sbjct: 906 VVIY--VDDVNDNDPVFNQSKYAADVLENSPTGTPVLRVHASDRDQGANGKITYKLTNGN 963
Query: 127 PESYFNIDIGSGSL 140
+ F+I+ +G +
Sbjct: 964 KDDAFSINNVTGEI 977
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY + E+ +VQ+ A+D D + + +YKI+AG+ + F ID +
Sbjct: 1612 VYNVTLRESVFLKTQVVQVIATDPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKL 1671
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DL P V I V +V+DN P+ P Y A++ EN +
Sbjct: 1672 DYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHH 1731
Query: 102 IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D + +R+ Y+I +GN +S F I SG
Sbjct: 1732 VITVNATDIDAEASHKRVYYRIESGNTDSMFLIGEQSG 1769
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES--YFNID-IGSDLT-GGP 62
Y A+I EN I++++A D D + ++ YK S +F+++ + +LT GGP
Sbjct: 51 YMAKIAENARVGTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGP 110
Query: 63 -----DQVYLIVYI-----------------QVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ Y++V I +V +++D P L Y +I EN
Sbjct: 111 LDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGS 170
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A DGD+ + I Y+I +GN + F ID +G
Sbjct: 171 TVVTVEARDGDVGINNPILYEIISGNSDGVFTIDSNTG 208
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E YFN I + +G P + V I++ ++NDN P+ + YYA + ENQ P++ +
Sbjct: 1362 EEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVV 1421
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D+ + ++SY +S G + F ID +G++
Sbjct: 1422 TASDKDVGTNAKLSYVLS-GVLYTRFAIDPDTGNI 1455
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 24/140 (17%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSDLT 59
++A +D D++ + R+ Y IS+GN F+++ I +
Sbjct: 1524 RVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDH 1583
Query: 60 GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P + V I +++VNDN P+ VY + E+ +VQ+ A+D D + +
Sbjct: 1584 GIPALESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQVVQVIATDPDEGANGQF 1643
Query: 119 SYKISAGNPESYFNIDIGSG 138
+YKI+AG+ + F ID +G
Sbjct: 1644 TYKITAGDTDDVFYIDANTG 1663
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
YYA + ENQ P++ + ASD D+ + ++SY +S G + F ID +
Sbjct: 1404 YYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLS-GVLYTRFAIDPDTGNITTREPLN 1462
Query: 56 SDLTGG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ TG + V I V + ND+VP Y + E+ +
Sbjct: 1463 REETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVKVGHTV 1522
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++A +D D++ + R+ Y IS+GN F+++
Sbjct: 1523 GRVATTDEDINDNARVRYYISSGNTSLMFSVN 1554
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + +Q+VNDN P Y + I EN + Q+ A+D D + R+S+ ISAG+
Sbjct: 480 VTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDG 539
Query: 129 SYFNIDIGSG 138
+F+I+ GSG
Sbjct: 540 GHFSIN-GSG 548
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 38/146 (26%)
Query: 4 DPV-----YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSD 57
DPV Y A ++EN P++++ ASD D + +I+YK++ GN + F+I ++ +
Sbjct: 917 DPVFNQSKYAADVLENSPTGTPVLRVHASDRDQGANGKITYKLTNGNKDDAFSINNVTGE 976
Query: 58 LT----------------------GGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
+T G P + + V I V++ NDN P Y +I
Sbjct: 977 ITVAGVIDREAVHTFVLTVQAEDQGEPSSRKTFAEVVITVKDENDNFPQFSFTGYEGEIA 1036
Query: 94 ENQSGILPIVQLAASDGDLDPDQRIS 119
EN P+ S + PDQ+IS
Sbjct: 1037 ENS----PV----GSTITMVPDQKIS 1054
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 50 FNIDIGSDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
F + + D GG + ++ V + NDN P+ + Y A+I EN I++++A
Sbjct: 11 FTVYVEDDFNGGGLARRGSKFFFLIVDDYNDNAPVFTEQPYMAKIAENARVGTTILKISA 70
Query: 108 SDGDLDPDQRISYKISAGNPES--YFNIDIGSGSL 140
D D + ++ YK S +F+++ +G L
Sbjct: 71 IDADSGTNSQVQYKFSNATATQTPFFSLNSVNGEL 105
>gi|156363834|ref|XP_001626245.1| predicted protein [Nematostella vectensis]
gi|156213114|gb|EDO34145.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 48 SYFNIDI----GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
SYF + + S +VY +V I+V++VNDN P YY ++E I+
Sbjct: 22 SYFRLRVQASDCSKKASSRRRVYAVVDIKVKDVNDNKPTFQRKSYYVVVLETAQIGGAII 81
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D P+ R++Y I +GN +F ID +G
Sbjct: 82 TVHASDSDEGPNGRVTYSIISGNDLGFFGIDSQTG 116
>gi|449490371|ref|XP_002196098.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Taeniopygia guttata]
Length = 2548
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT------ 59
Y + EN ++ + A+DGD P+ I Y++ +AG+ F ID S +
Sbjct: 547 YRESVRENLEVGYEVLTVRATDGDAGPNANILYRLLNAGDANEVFEIDSRSGVIRTRGPV 606
Query: 60 --------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V I V++ NDN P + Y AQ+ E+
Sbjct: 607 DREVVDTFELLVEATDQGQDPGPRSATATVRIAVEDDNDNAPQFSERRYVAQVPEDVVPN 666
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Q+ A+D D + + Y I +GN +F ID +G+L
Sbjct: 667 VAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGAL 707
Score = 42.4 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID--IGSDLTGG 61
Y A + ENQ P+ Q+ A D D R+ Y ++A F +D G+ T
Sbjct: 439 YQATVEENQPARTPVTQVTAQDPDEGEAGRLHYSMAALFDSRSNDLFTVDPVTGAISTAA 498
Query: 62 P-------DQVYLIVYIQ---------------VQNVNDNVPMTLDPVYYAQIVENQSGI 99
P V+ ++ + V + ND+ P Y + EN
Sbjct: 499 PLDRESKSTHVFRVIAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQLEYRESVRENLEVG 558
Query: 100 LPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y+ ++AG+ F ID SG
Sbjct: 559 YEVLTVRATDGDAGPNANILYRLLNAGDANEVFEIDSRSG 598
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y AQ+ E+ + ++Q+ A+D D + + Y I +GN +F ID
Sbjct: 655 YVAQVPEDVVPNVAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGALDVVTPLD 714
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P + +V IQV +VNDN P+ + + A ++EN
Sbjct: 715 YEVTKEFTLRIRAQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVGYS 774
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + + Y + F I+ +G
Sbjct: 775 VIHVQAIDADSGDNSWLVYTLLETGTGFPFTINNSTG 811
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 1158 IQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGTNAQIMYQIVEGNIP 1217
Query: 129 SYFNIDIGSGSL 140
F +DI SG L
Sbjct: 1218 EVFQLDIFSGEL 1229
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 26/138 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y + E++ +V ++A+D D + RI+Y + P+ D G+ T
Sbjct: 968 YTINVNEDRPVGTTVVVISATDEDTGENARITYLMEDSIPQFSIAADTGAVTTQMELDYE 1027
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y I E+ +
Sbjct: 1028 DQVSYTLAITARDNGIPQKSDTTYL--EILVSDVNDNAPQFLRHSYQGSIYEDVPTFTSV 1085
Query: 103 VQLAASDGDLDPDQRISY 120
+Q++A+D D + R+ Y
Sbjct: 1086 LQVSATDRDSGLNGRVFY 1103
>gi|334329182|ref|XP_003341195.1| PREDICTED: protocadherin-16 [Monodelphis domestica]
Length = 3184
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++V I VQ+VNDN P+ P Y + E+ +V++ ASD D P + +
Sbjct: 2457 PRSTTVLVVITVQDVNDNPPVFAQPHYRVAVPEDTPVGTELVRVVASDPDPGPHGLVRFT 2516
Query: 122 ISAGNPESYFNIDIGSGSL 140
IS+G+P F +D GSG L
Sbjct: 2517 ISSGDPARLFELDEGSGVL 2535
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ ++ + +Q+ NDN P L P Y A + E++ P++++ A D D P +++Y ++
Sbjct: 2035 FTVLTLSLQDANDNAPRFLKPHYAAFVPESRPLSGPLLKVEADDLDQGPGGQVTYSLAPS 2094
Query: 126 NP-ESYFNIDIGSGSL 140
P F+ID G++
Sbjct: 2095 QPTRGLFHIDPAMGTI 2110
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 27/139 (19%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSDLTGG 61
A D DL R+SY+++ G+ + +F++ + SD
Sbjct: 1446 ARDPDLGEAARLSYQLAGGSGDGHFHLHPSSGALSVTRPLDREQRAEHTLTVVASDHGSP 1505
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ + V ++ND P Y+ ++ EN+ ++ L A+D DL + +++Y
Sbjct: 1506 PRSATQLLTVSVVDINDEAPTFPQAAYHVRVSENRPPGTTVLTLRATDPDLGVNGQVTYG 1565
Query: 122 ISAGNPESYFNIDIGSGSL 140
+G+ F++D SG L
Sbjct: 1566 GVSGD---TFSLDPNSGVL 1581
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
Y+ ++ EN+ ++ L A+D DL + +++Y +G+ F++D S
Sbjct: 1531 AYHVRVSENRPPGTTVLTLRATDPDLGVNGQVTYGGVSGD---TFSLDPNSGVLTTRQVL 1587
Query: 57 --------DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT GG P ++ V++ V++ ND+ P ++ E Q
Sbjct: 1588 DREEQQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQT- 1646
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ L ASD D P+ +I+Y+I G+P F +D SG+LG
Sbjct: 1647 LTVLRASDPDAGPNGQINYQILNGDPSGAFILDAVSGTLG 1686
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 68 IVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+VY++V + NDN P +Y A + +++++A D D P ++Y+I AG
Sbjct: 541 LVYVKVFVSDENDNRPEFYPRLYAASVSTQSPPGTAVLRVSAHDPDQGPHGTLTYRILAG 600
Query: 126 NPESYFNIDIGSGSL 140
N F +D SG L
Sbjct: 601 NSPPLFALDKDSGLL 615
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG---- 60
P Y + E+ +V++ ASD D P + + IS+G+P F +D GS +
Sbjct: 2481 PHYRVAVPEDTPVGTELVRVVASDPDPGPHGLVRFTISSGDPARLFELDEGSGVLRLARQ 2540
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G + V ++VQ+VN++ P A + ENQ
Sbjct: 2541 LDREAQAQHQLVVKAADPPGAHFALVPVTVEVQDVNEHGPAFPLLTLSASLPENQPPGTL 2600
Query: 102 IVQLAASDGDLDPDQRISYKI 122
+ L A D D R+ Y +
Sbjct: 2601 VTTLHALDKDTGAFGRLHYSL 2621
>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
Length = 3375
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
VY + E+ + +V+L +D D+ + +SY I+ GN + F++ +
Sbjct: 1010 VYNVSLPEDVARDFKVVRLNCTDADIGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSL 1069
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+G VY+ V +VNDN P+ L Y + E+
Sbjct: 1070 DRETVASYTLILEAIDNGPSGNRRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAA 1129
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IVQ+ A+D D + R+ Y+I GN ++F I+ +G
Sbjct: 1130 SSIVQVKATDADEGINGRVWYRIVKGNEHNHFRINPSTG 1168
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---------------- 49
+Y + EN + ++Q+ A+D D+ ++SY S +P+ +
Sbjct: 475 LYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFS-DDPDRFSLDKDTGVIILTARLD 533
Query: 50 FNIDIGSDLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
F LT GG ++ V I V +VNDNVP Y + EN+ + +V+
Sbjct: 534 FETTQRYTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKEAYLGALRENEPSVTQVVR 593
Query: 105 LAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
L ASD D P+ +ISY I A YF+I + G
Sbjct: 594 LRASDEDSPPNNQISYSIVQASAFRDYFDITMSEG 628
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + EN G + Q+ A+D D+ + +SY I+ GN + F +D
Sbjct: 1544 YNVSVSENVGGGTAVAQVRATDRDIGLNSVLSYYITRGNEDLTFRMDRVTGEIATRPSPP 1603
Query: 54 -----------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ + G P VY+ + + NDN P +Y + E S +
Sbjct: 1604 DRERQSFYSLVVTVEDEGNPSLSATTTVYVTILDENDNAPAFRQQLYEVTLDEGPSTLNA 1663
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D D P+ +++Y I+ GN F ID +G +
Sbjct: 1664 SLVTVQALDQDEGPNGKVAYAITEGNILGTFRIDNATGEI 1703
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES-------------------------YFNIDIG 55
+ A DGD P ++ Y I AG+P ++N+ I
Sbjct: 1774 VWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENFPFYNLTIA 1833
Query: 56 SDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ G P ++V ++V ++NDN P+ L+ + EN + + ++ A D D P
Sbjct: 1834 AQDRGVPPLSSTILVGVRVLDINDNDPVLLNLPMNLTLSENAAVSSFVTRVLARDADQGP 1893
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +++ I+AGN E+ F I+ SG
Sbjct: 1894 NALLTFDITAGNTENAFYINSTSG 1917
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
L Y + E+ IVQ+ A+D D + R+ Y+I GN ++F I+ + L
Sbjct: 1114 LQSSYEVSVPEDIPAASSIVQVKATDADEGINGRVWYRIVKGNEHNHFRINPSTGLVMRG 1173
Query: 60 ----------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V + V++VND VP+ Y + +
Sbjct: 1174 VRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETA 1233
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
GI + + A+D D +SYKI +G E F ID +G
Sbjct: 1234 GIGTSVAVVRATDRDTGNGGLVSYKIVSG-AEGKFEIDESTG 1274
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
+ A+I E + Q+ A D D P+ ++SY++ G P
Sbjct: 906 FVAEIAEGLPAGSSVFQVVAIDLDEGPNGQVSYRMQVGMPRMDFLINSTGGLVTSTAVLD 965
Query: 48 -----SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
YF + SD + ++V +VND P VY + E+ + +
Sbjct: 966 RERIPEYFLRVVASDAGTPAKSSTSTLTVKVLDVNDENPTFFPAVYNVSLPEDVARDFKV 1025
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V+L +D D+ + +SY I+ GN + F++ G
Sbjct: 1026 VRLNCTDADIGLNAELSYFITGGNQDGKFSVGFRDG 1061
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + ++ + + +VNDN P+ P Y + EN G + Q+ A+D D+ + +SY
Sbjct: 1517 PRRKEHVLRVNILDVNDNPPVIDSPFGYNVSVSENVGGGTAVAQVRATDRDIGLNSVLSY 1576
Query: 121 KISAGNPESYFNIDIGSGSLG 141
I+ GN + F +D +G +
Sbjct: 1577 YITRGNEDLTFRMDRVTGEIA 1597
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L ASD D P+ +ISY I A YF+I +
Sbjct: 577 YLGALRENEPSVTQVVRLRASDEDSPPNNQISYSIVQASAFRDYFDITMSEGYGVIIVNH 636
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y ++E+
Sbjct: 637 PLDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIM 696
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S+F I+ SG +
Sbjct: 697 AGATVLFLNATDMDRSREYGQESIIYSLEGSSHFRINARSGEI 739
>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
Length = 3342
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNID-------- 53
++ +Y A + EN S ++ + A D DL P+ +I+Y I +GN + F ID
Sbjct: 2493 VEDIYSASVSENVSLGHHVITVVAEDMDLSPENSKINYFIESGNDQGKFKIDANDGSITV 2552
Query: 54 ---------------IGSDLTGGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ G P + V I+V+++ND+ P+ Y +I EN +
Sbjct: 2553 LERLDREATDTYTLIIGAVDNGEPVNNATAEVVIEVEDINDHSPIFDHVQYEGRIAENAT 2612
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A+D D+ + + Y I +G F ID+ SG++
Sbjct: 2613 ASTYILTVHATDRDIGYNGEVEYSIISGTYSDLFAIDVVSGAV 2655
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISA 124
++ V I++ +VN+ P+ ++ +Y A + EN S ++ + A D DL P+ +I+Y I +
Sbjct: 2475 FVTVRIEITDVNNQSPVFVEDIYSASVSENVSLGHHVITVVAEDMDLSPENSKINYFIES 2534
Query: 125 GNPESYFNIDIGSGSL 140
GN + F ID GS+
Sbjct: 2535 GNDQGKFKIDANDGSI 2550
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 27/152 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y I+EN P+VQ+ A+D D + I+Y ++ N YF +
Sbjct: 1036 YPVSILENLPISTPVVQVEATDNDRGANALITYTLTPNNDSPYFAVFPREGWLYTRQVLD 1095
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD P V + V + NDN P Y+ I EN +
Sbjct: 1096 RELKSTFTLTIMASDSGSPPQNSSATVQVTVVDANDNAPHFTKKSYHFHINENLPAGTEV 1155
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ A D DL P+ +++Y +S P F ID
Sbjct: 1156 DRVEAVDPDLGPNGQVTYTLS---PSGDFTID 1184
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 30/158 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y +++ E + + + Q++A+D D + I Y++++GN ++ F ID + +
Sbjct: 2188 YQSRVWEVPNSDIYVTQVSATDADEGTNGAIYYEVTSGNTDNAFAIDHVTGIVTTAKSLD 2247
Query: 60 ---------------GGPDQV--YLIVYIQVQNVNDNVP--MTLDPVYYAQIVENQSGIL 100
GG Q+ + I + +VNDN P + +DPV + E+ L
Sbjct: 2248 YEIEDSYVLTVVARDGGSPQLTGTATMRIGIVDVNDNQPVFVQMDPV---SVSEDLGVGL 2304
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D +P+ + S+ S GNP YF ID SG
Sbjct: 2305 SVTTVTATDSDTNPNIQYSFT-STGNPGGYFAIDQYSG 2341
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y V +++ + NDN P + Y +++ E + + + Q++A+D D + I Y++++G
Sbjct: 2166 YATVQVELTDANDNAPQFVQDRYQSRVWEVPNSDIYVTQVSATDADEGTNGAIYYEVTSG 2225
Query: 126 NPESYFNIDIGSG 138
N ++ F ID +G
Sbjct: 2226 NTDNAFAIDHVTG 2238
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVP 81
++ + G++ ++ +SY N + F +DI + G P + L + + + +VNDN P
Sbjct: 975 RIVEATGEIILNKEVSY-----NDQLSFEVDIQAYDAGEPSLEGSLTLTVIILDVNDNGP 1029
Query: 82 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ Y I+EN P+VQ+ A+D D + I+Y ++ N YF +
Sbjct: 1030 VFTMGFYPVSILENLPISTPVVQVEATDNDRGANALITYTLTPNNDSPYFAV 1081
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +QR SY ++ + F D ++VY V +VNDN P P +
Sbjct: 1719 LDREQRDSYVVTVYAMDGAF--------PARYDMATVLVY--VMDVNDNNPTFAPPTFDI 1768
Query: 91 QIVENQS-GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ENQS G+ I A+D D P+ + Y I+ G+P++ F+I+ +G++
Sbjct: 1769 TLPENQSPGV--IHNAIATDADEGPNGDLIYSITGGDPKNAFSINQSTGAI 1817
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMT 83
+A + D ++ SY IS +D P + I V +VNDN P+
Sbjct: 456 VATTASSFDREEVASYDISIR----------ATDHGSPPQHAEENLTIAVTDVNDNPPIF 505
Query: 84 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES-----YFNIDIGSG 138
P+Y+A I+E P+ Q+ A+D D + +I Y+IS PE +F I+ SG
Sbjct: 506 DLPLYHATIIEASEPGTPVKQVHATDADEGVNAQIIYRIS---PEGTDYSDWFEINPMSG 562
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 28/165 (16%)
Query: 4 DPVYYAQ----IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------ 53
+PV+ ++ ++E++ ++ + A+D D + R+ Y I++GN + F++D
Sbjct: 1549 NPVFVSRSSTDVMEDEPVGFNVIHIIATDEDSGENGRVGYTITSGNEDGKFSLDAVTGLL 1608
Query: 54 -IGSDLTGGPDQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVEN 95
I L + Y +V I+V +VND P +Y + E+
Sbjct: 1609 TIAHSLDHEHKRDYELVILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIYVMNVSES 1668
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ + + A DGD + RI+Y++ F I+ +G +
Sbjct: 1669 QAPGTYVGMVVAIDGDSGVNGRITYELPEEIARGMFRINATTGEI 1713
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP----------------- 46
D Y A + E Q + + A+D D ISY + +P
Sbjct: 1240 DRTYQASVREEQPAGEFVAWIIATDTDSGVLGNISYSLIDSSPKFIIDSSGVISTAAAID 1299
Query: 47 ---ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
ESY+ + + + G P Q V +++ ++NDNVP+ Y EN +
Sbjct: 1300 REDESYYTLTVLAQDGGNPPMQATASVRVRILDLNDNVPIAAMSAYIFTADENIQPPTVV 1359
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D+ + +I Y I+ GN ++++ SG +
Sbjct: 1360 GVVSASDMDVGDNGKIYYYITEGNDFDVWDVNHSSGEV 1397
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 759 YTVSVVENAPAGTELLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSL 818
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 819 DREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 878
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I+ SG
Sbjct: 879 VTTVSATDPDMGPNGTVQYSISAGD-RSRFQINAKSG 914
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
VY QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2329 VYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKTL 2388
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2389 DRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENL-GTLP 2447
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ R+SY + GN ++ F + SG L
Sbjct: 2448 RTILQVVARDDDQGPNSRLSYVLLGGNEDNAFAL-TASGEL 2487
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1367 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEE 1426
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1427 RQFAIDRFSGQV 1438
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ VY QI EN I+Q++A+D D + ++ Y I GN
Sbjct: 2311 VVVMVLDINDNNPVFSQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTH 2370
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2371 QEFRIDSVTGAI 2382
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------I 54
L Y A + E + + +++++ASD D + I Y I GN E F ID I
Sbjct: 1382 LKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEERQFAIDRFSGQVTLI 1441
Query: 55 GS-DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D P LI + I + + NDN P + ++EN
Sbjct: 1442 GKLDYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1501
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1502 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1543
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 2821 PFSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 2879
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F I+ +G +
Sbjct: 2880 IVNGNKENSFTINHATGEI 2898
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 644 PVFAQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 703
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 704 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSV 763
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+DGDL + + + + A + + F +D SG L
Sbjct: 764 VENAPAGTELLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRL 812
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3372 FFPTVMENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3430
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E +
Sbjct: 3431 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAV 3490
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I +G +
Sbjct: 3491 GEVFASDRDMGADGEVHYLIFGNSRKKGFQIHKMTGQI 3528
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ R+SY + GN ++ F + +L
Sbjct: 2435 YSVNVPENL-GTLPRTILQVVARDDDQGPNSRLSYVLLGGNEDNAFALTASGELRVIQSL 2493
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V + V ++NDNVP +++ I E+
Sbjct: 2494 DREARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIPEDAPTGTD 2553
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2554 VLLVNASDADAAANAVISYSIIGGN--SQFTINPSTGQI 2590
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y A + EN +++++A+D D+ P I Y I AG+P F+ID + + QV
Sbjct: 2164 YEAVMSENSPVEKSVIKVSATDFDVGPSGLIRYSIVAGDPNHDFSIDEETGVIRVHKQVD 2223
Query: 66 -----------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN----QSG 98
++ I +++VNDN P LD Y A IVEN G
Sbjct: 2224 YERKNRYVITVQAEDSSTEARHDTCMISITLKDVNDNPPTFLDNPYEASIVENAIIPSGG 2283
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L I Q+ A D D D ++ I Y++ G+ ++ F ++ +G++
Sbjct: 2284 GLLITQMQAVDVDADSNRNIYYRLLDGD-KALFRVNSSNGNV 2324
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V ++A+D D + + Y I +GN +F ID + L
Sbjct: 480 VVAVSATDEDTGVNALVFYGIESGNDRHWFAIDKKTGLVTTVEILNREEQDLVELKIYAH 539
Query: 60 -GGPDQ--VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GGP++ Y + I +Q+ ND P + + EN + + Q+ A+D DL P+
Sbjct: 540 DGGPNRKFAYTTLKIHIQDENDEAPAFVMNHLNVTLSENATPHALVTQITATDNDLGPNG 599
Query: 117 RISYKISAGNPESY---FNIDIGSGSL 140
+SY + + Y F ID SG +
Sbjct: 600 TVSYALQSSVKLQYGDMFEIDPLSGRI 626
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL 67
+A E+ I P+ L + +LD + + Y+I I + D P
Sbjct: 2094 FASRSESLFSIGPVDGLLRVNSELDRELKSEYQI----------IVVAKDRGKPPLSATT 2143
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+ + V + NDN P+ Y A + EN +++++A+D D+ P I Y I AG+P
Sbjct: 2144 TIIVHVLDENDNSPVFEQRQYEAVMSENSPVEKSVIKVSATDFDVGPSGLIRYSIVAGDP 2203
Query: 128 ESYFNIDIGSG 138
F+ID +G
Sbjct: 2204 NHDFSIDEETG 2214
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
I Q +A D DL + +SY ISAGN F ID I +
Sbjct: 1331 IYQFSAEDMDLGLNGEVSYSISAGNIRDAFRIDAITGVLRVNKALDFEQKSSYALNITAA 1390
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P IV+ +++ +VNDN P+ + + E + + + A+D DL +
Sbjct: 1391 DGGSPSLSTSIVFQLKLTDVNDNAPVFPNGAIVRTVREGIASDTMVASVVATDRDLKQNS 1450
Query: 117 RISYKISAGNPES---YFNIDIGSGSL 140
+ISY ++ P + +F I +G +
Sbjct: 1451 KISYSLTGQVPHTEPFHFRIKAETGQI 1477
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ ++ ++I ++ G P YLIV I V + NDN P+ Y + E+ ++Q+
Sbjct: 196 KEFYRLNISAEDGGNPPMHGYLIVNITVLDTNDNPPIFDHSAYSVSMNESLPAGHRVLQV 255
Query: 106 AASDGDLDPDQRISYKISAGNPE--SYFNIDIGSG 138
ASD D + RISY ++ N + + F+ID +G
Sbjct: 256 HASDADAGDNARISYSLAESNAKQANQFSIDQHTG 290
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 37/169 (21%)
Query: 3 LDPVYYAQIVEN----QSGILPIVQLAASDGDLDPDQRISYKI------------SAGN- 45
LD Y A IVEN G L I Q+ A D D D ++ I Y++ S GN
Sbjct: 2265 LDNPYEASIVENAIIPSGGGLLITQMQAVDVDADSNRNIYYRLLDGDKALFRVNSSNGNV 2324
Query: 46 --------------PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ 91
+ ID G+ G + L V + NDN P+ P Y
Sbjct: 2325 YAMRSLDREQQSEYTATVLAIDSGTPRLTGTGTLIL----SVSDRNDNAPVFEKPFYEIH 2380
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ EN I ++ A+D D + + Y + P +F +D +G L
Sbjct: 2381 VSENLPADTFIAKITATDSDQGLNALLRYTLK--EPSGWFELDPQTGVL 2427
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
++VQ+VNDN PM V+ ++E Q+ + Q+ A+D D + + Y+ + S
Sbjct: 2668 VRVQDVNDNSPMCSQAVFNVTVMEEQAPPEFVAQVHATDADEGTNGDVFYQFESVAETSL 2727
Query: 131 FNIDIGSGSL 140
F+I+ +G +
Sbjct: 2728 FSIESDTGKV 2737
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++N+ +G+ G P Q V + + +VNDN P + I EN+ ++ L+
Sbjct: 3482 SHYNLTVGAIDNGIPSQTGQTTVLVTIADVNDNAPYFENTEIVGYIAENEPPYTSVMVLS 3541
Query: 107 ASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
A D D P+ +Y + G ++ F +D SG L
Sbjct: 3542 AKDKDAPPNTGPFAYFLVGGVHKNRFELDRHSGVL 3576
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ VY+ V + NDN P+ DP+ Y A++ E+ ++ + ASD D P+ ISY I G
Sbjct: 1933 VTVYMNVIDFNDNSPV-FDPLSYTAEVREDAPLNTTVLSVHASDLDSGPNGEISYTILEG 1991
Query: 126 NPESYFNI 133
+ + F I
Sbjct: 1992 DDDQQFRI 1999
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
+V+L S + I +I+A NP + G +L+ +++I++++VND+
Sbjct: 936 VVRLKRSLRGQQAGRTIPIEITARNPTVGDDGGGGGELSASQ-----LLFIEIEDVNDHT 990
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
P Y + E L A+D D+ + +++Y I+ GN E F I
Sbjct: 991 PFFDHTSYEISLAELTPVNERFFSLYAADDDVGENGQVTYSITGGNEEQKFGI 1043
>gi|12621132|ref|NP_075243.1| protocadherin Fat 2 precursor [Rattus norvegicus]
gi|22095688|sp|O88277.1|FAT2_RAT RecName: Full=Protocadherin Fat 2; AltName: Full=Multiple epidermal
growth factor-like domains protein 1; Short=Multiple
EGF-like domains protein 1; Flags: Precursor
gi|3449286|dbj|BAA32458.1| MEGF1 [Rattus norvegicus]
Length = 4351
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN P++ + A D D D + Y + AG F+I+
Sbjct: 1036 VYQGQVQENSPAGTPVMVVTAQDDDSGLDGELQYFLRAGTGLETFSINQDTGMLETLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y ++E+
Sbjct: 1096 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN +F + +G L
Sbjct: 1156 VLQLEAWDPDSSSQGKLTFNLTSGNHLGHFIVHPFTGLL 1194
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2276 VYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 2336 ELDYETHQHFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D+ R+ Y I +GN + +F+I+ SG
Sbjct: 2396 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSG 2434
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2778 DLVSLVSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2837
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2838 LSVEPGSNIHELFAVDSESG 2857
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------------- 56
P+ +LAA+D D ++ Y IS GN E F+I++ +
Sbjct: 733 PLARLAATDPDTGFHGKLVYVISDGNEEGCFDIELETGLLMVAAALDYETTSFYVLNVTV 792
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
DL P + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPPKSSWKLLTVTVKDWNDNPPRFPPGGYQLTISEDTEVGTTIAELKTEDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+R+ Y + P F++ +G L
Sbjct: 853 RRVRYTLLT--PTEKFSLHPFTGEL 875
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y ++E+ ++QL A D D ++++ +++GN +F + + L Q
Sbjct: 1140 PVFYPSVLEDAPLGTSVLQLEAWDPDSSSQGKLTFNLTSGNHLGHFIVHPFTGLLTTAKQ 1199
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ Y++ V + + +VNDN PM ++ ++ E S +
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLSPLS 1259
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + ++Y I + ES F ID +G
Sbjct: 1260 PEPVYRLVASDPDEGLNGSVTYSIEESDEES-FRIDPVTG 1298
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
+VE+ G Q+ G L ++ + ++ AG S++ D G L+ + V
Sbjct: 964 LVEDAHGTF---QVHPMTGALSLEKELDFERRAGYNLSFWASDSGKPLS---RRTLCHVE 1017
Query: 71 IQVQNVNDNV--PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ V +VN+N+ P VY Q+ EN P++ + A D D D + Y + AG
Sbjct: 1018 VLVMDVNENLHSPHFSSFVYQGQVQENSPAGTPVMVVTAQDDDSGLDGELQYFLRAGTGL 1077
Query: 129 SYFNIDIGSGSL 140
F+I+ +G L
Sbjct: 1078 ETFSINQDTGML 1089
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D+ R+ Y I +GN + +F+I+ S +
Sbjct: 2381 EPQYEANVSELATCGHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFN 2440
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ VYI N N P VY A++ EN +
Sbjct: 2441 LCKKQLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 2501 IELLAIDKDSGPYGTVDYTI 2520
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2802 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWIT 2860
Query: 57 ---DLTGGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2861 TLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
+ L D D+ D +++++ I+ G+P F+I
Sbjct: 2921 NEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSI 2959
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 2174 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2231 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEI 2331
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 3286 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAVVGDVILT 3344
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F I+ G L
Sbjct: 3345 VSASDDDGPVNSAITYSLVGGNQLGHFTINPKKGKL 3380
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + + + ++Q+ A D D + I Y GN + +FNID
Sbjct: 1560 YEANVPDTTAPGTELLQVRAVDADRGANAEIHYSFLKGNSDGFFNIDSLLGIITVAQRLY 1619
Query: 54 ----------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ ++ G P + L +V I V + + P+ Y+ +I E+ PI
Sbjct: 1620 HVHLTRHALTVKAEDQGSPRRHDLALVVIHVHPSDSSAPVFSKDEYFIEIPESVPIGSPI 1679
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ L+A ++Y++ GN +S F+++ SG
Sbjct: 1680 LLLSAGSS-----SEVTYELREGNKDSVFSMNSYSG 1710
>gi|391338388|ref|XP_003743540.1| PREDICTED: neural-cadherin-like [Metaseiulus occidentalis]
Length = 3036
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 25/142 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
+Y A++ E++ ++ + A D D RI Y+I+ GN F + + G+ GP
Sbjct: 1361 LYEAEVNEDEDVQHTVITVTAKDKD--ESSRIRYEITQGNIGGAFAVKNETGAIFVAGPL 1418
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
++ + V I+V++VNDN P+ P Y AQIVE LP I
Sbjct: 1419 DYETRKEYRLRLVASDNLNENHTTVLIRVKDVNDNAPIFDRPTYDAQIVEENDRNLPQKI 1478
Query: 103 VQLAASDGDLDPDQRISYKISA 124
+ + A+DGD D + I Y ++
Sbjct: 1479 LTVTATDGDRDRESDIVYFLTG 1500
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 44/177 (24%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY-----------------KISAGN 45
P Y AQIVE LP I+ + A+DGD D + I Y I+
Sbjct: 1460 PTYDAQIVEENDRNLPQKILTVTATDGDRDRESDIVYFLTGQGVDNTDSENNKFAINQTT 1519
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYY 89
E Y + DL G Q V+ + ++++NDN P V+
Sbjct: 1520 GEIYVLKPLDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDINDNPPFFAGGVFS 1579
Query: 90 AQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAG----NPESYFNIDIGSG 138
+ EN + + ++ + A+D D DP + +++Y I N E F ID +G
Sbjct: 1580 GNVTENGTAGMTVMTMTATDYD-DPMEGTNAKLTYSIEQNQVNENGELIFAIDEETG 1635
>gi|405951684|gb|EKC19577.1| Protocadherin-1 [Crassostrea gigas]
Length = 1027
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + VQ+VNDN P+ Y+A IVEN IV L ASD DLD + RI Y I N +
Sbjct: 446 ITVLVQDVNDNAPVFSKKSYFASIVENNEPGKQIVSLLASDKDLDNNSRIRYYIQGKNLD 505
Query: 129 SYFNIDIGSGSL 140
F ID SG+L
Sbjct: 506 --FAIDSRSGAL 515
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 26/143 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y+A IVEN IV L ASD DLD + RI Y I N + F ID
Sbjct: 465 YFASIVENNEPGKQIVSLLASDKDLDNNSRIRYYIQGKNLD--FAIDSRSGALKAKRSFD 522
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ +D P V++ V +VNDN P + ++EN + +
Sbjct: 523 REHASEYEVTIVATDSGFPPLTATTTVFVSVIDVNDNAPSFKVSHFQFFVLENMPAGMKV 582
Query: 103 VQLAASDGDLDPDQRISYKISAG 125
QL+A+D D+ + + + ++ G
Sbjct: 583 GQLSATDKDVGVNGNLLFSVTEG 605
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 588 YTVSVVENAPAGTELLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I+ SG
Sbjct: 708 VTTVSATDPDMGPNGTVQYSISAGD-RSRFQINAKSG 743
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
VY QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 VYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKTL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ R+SY + GN ++ F + SG L
Sbjct: 2277 RTILQVVARDDDQGPNSRLSYVLLGGNEDNAFAL-TASGEL 2316
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDRFSGQV 1267
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ VY QI EN I+Q++A+D D + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPVFSQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTH 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------I 54
L Y A + E + + +++++ASD D + I Y I GN E F ID I
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEERQFAIDRFSGQVTLI 1270
Query: 55 GS-DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D P LI + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F I+ +G +
Sbjct: 2709 IVNGNKENSFTINHATGEI 2727
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFAQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+DGDL + + + + A + + F +D SG L
Sbjct: 593 VENAPAGTELLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRL 641
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3201 FFPTVMENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I +G +
Sbjct: 3320 GEVFASDRDMGADGEVHYLIFGNSRKKGFQIHKMTGQI 3357
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ R+SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGPNSRLSYVLLGGNEDNAFALTASGELRVIQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V + V ++NDNVP +++ I E+
Sbjct: 2323 DREARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAAANAVISYSIIGGN--SQFTINPSTGQI 2419
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y ++ EN+ I+ ++A DGD P+ + YKISAGN + F +
Sbjct: 1365 YQVRVPENEPVNTTILTVSAVDGDSGPNGMVRYKISAGNERNEFFVHSITGAVTILEPLD 1424
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+DL P Q + + V ++NDN P VY+A + EN +
Sbjct: 1425 YDMVQEYRLNITATDLGFEPRQAVATLTVNVSDINDNPPTFNQSVYHAYLPENSPLDSFV 1484
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A D D + YKI GN +F I +G +
Sbjct: 1485 YKVVARDIDSPKYAVVQYKILGGNGMDHFRIHENTGEI 1522
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 37/167 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--------------------- 45
Y A + EN S ++Q++A D D + R+ Y I+ G+
Sbjct: 416 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAKGDDNRDFTISEDGGVIRVAKNLN 475
Query: 46 ----PESYFNI---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P Y I D +++ V I V ++NDN P+ LD Y A ++EN
Sbjct: 476 FERKPRYYLTIHGDDCAAEVGEKSRSDTAQVTITVLDINDNAPVFLDSPYIAHVMEN--- 532
Query: 99 ILP----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 533 MVPPGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 578
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + + V + NDN P+ +Y A ++EN+ LP+V+++A D D + +++Y + N
Sbjct: 922 LELQVNVTDANDNAPVMEAAIYNATVLENEYPPLPVVKISAKDRDSGDNGQVTYYL-VNN 980
Query: 127 PESYFNIDIGSGSL 140
F IDI +G +
Sbjct: 981 FHETFVIDISTGQI 994
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 21 IVQLAASDGDLDP-DQRISYKISAGNPESYFNID-----------------------IGS 56
++ + A D D+ P + + SY I GN F +D IG+
Sbjct: 1696 LLTVRAIDKDIRPQNNQFSYSIIGGNIGQAFKVDPQTGDIETAKQLDRESMSMYDLIIGA 1755
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
D+ P+ V+I++ +VNDN P+ P + EN+ I+ L+A+D DL P+
Sbjct: 1756 IDIGLPPETGTATVHIELTDVNDNGPVFDPPEVIGYVSENEPPGTSIMTLSATDPDLPPN 1815
Query: 116 QR-ISYKISAGNPESYFNIDIGSGSL 140
SY++ G + +D SG L
Sbjct: 1816 GAPFSYRLIGGRQSNMVTLDKHSGVL 1841
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+V L + I +N + P Y ++ EN+ I+ ++A DGD P+ + YKI
Sbjct: 1342 DEVTLTLVISGEN--RHAPTFAAVSYQVRVPENEPVNTTILTVSAVDGDSGPNGMVRYKI 1399
Query: 123 SAGNPESYFNIDIGSGSL 140
SAGN + F + +G++
Sbjct: 1400 SAGNERNEFFVHSITGAV 1417
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGP 62
+Y A ++EN+ LP+V+++A D D + +++Y + N F IDI + D
Sbjct: 942 IYNATVLENEYPPLPVVKISAKDRDSGDNGQVTYYL-VNNFHETFVIDISTGQIDTNARL 1000
Query: 63 DQVYLIVYIQV---------------------QNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ + Y + + NDN P ++ + EN
Sbjct: 1001 DREEIASYELIVEARDHGHPHLTGTTTVLVTVLDKNDNPPH-FTRLFSVNVTENSEIGTF 1059
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ +SD D+ + +SY + NP F+ID SG++
Sbjct: 1060 VIRITSSDLDIGQNANVSYSFTY-NPGRKFSIDALSGNV 1097
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +Q +Y + I D P + V + V + NDN P+ DP
Sbjct: 367 GPLDREQTSNYTLQV----------IAKDRGDPPRSSSIPVTVTVLDENDNSPV-FDPKQ 415
Query: 89 Y-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 416 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAKGDDNRDFTI 461
>gi|395508999|ref|XP_003758794.1| PREDICTED: cadherin-23-like, partial [Sarcophilus harrisii]
Length = 3356
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY ++E+ +V L +D D+ + +SY I+ GN + F I
Sbjct: 1000 VYNVSLLEDIPRDFRVVWLNCTDNDVGLNAELSYFITGGNIDGKFRIGYRDGVVRTVVNL 1059
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG VYI V +VNDN P+ L Y A + E
Sbjct: 1060 DRETTAAYTLIVEAIDNGPVGKRRTGTA-----TVYITVLDVNDNRPIFLQSSYEASVPE 1114
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D + R+ Y+I GN + F I + SG L
Sbjct: 1115 DIPEGSSIVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLL 1160
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V + V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 539 GGGEETTGRVRVNVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 598
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 599 YSIVNASAFGSYFDISVYEG 618
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1816 AFYNLTICARDRGTPPLSSMMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHIL 1875
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D P+ +++ I+AGN + F I+ +G
Sbjct: 1876 ASDADSGPNALLTFNITAGNRNNAFFINATTG 1907
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D + R+ Y+I GN + F I + S L
Sbjct: 1122 IVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLLMRGPRPLDRERNSSHVLVVEA 1181
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND VP+ Y + +GI ++ + A+D D
Sbjct: 1182 YNYDLGPMRSSVRVIVYVEDVNDEVPVFTQQQYSRLGLRETAGIGTSVIVVRATDRDTGD 1241
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ Y+I +G+ E F ID +G
Sbjct: 1242 GGLVIYRILSGS-EGKFEIDESTG 1264
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + EN G +VQ+ A+D D + +SY I+ GN + F +D +TG
Sbjct: 1534 YNVSVNENVGGGTAVVQVVATDRDSGINSVLSYYITGGNEDMTFRMD---RVTGEIATRP 1590
Query: 62 --PDQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVEN--- 95
PD+ +L+ VY+ V + NDN PM P Y + E
Sbjct: 1591 SPPDRERQSFYHLVVTVEDEGTPTLSATTHVYVTVVDENDNAPMFQQPRYEILLDEGPDT 1650
Query: 96 -QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+L + LA +G P+ I+Y I AGN F +D +G
Sbjct: 1651 LNISLLTVQALAPDEG---PNGTIAYSIIAGNIIDTFQMDSVTG 1691
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD----------------------- 57
+ + A D D+ + ++S+ +++GN F I +D
Sbjct: 1439 VAVVTARDADIGSNGQVSFYLASGNIGGAFEILTTNDSIGEVFVARPLDREELDHYILKI 1498
Query: 58 --LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ GG P I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D
Sbjct: 1499 VAIDGGSPPRMKDHILRVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVVATDRDS 1558
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D +G +
Sbjct: 1559 GINSVLSYYITGGNEDMTFRMDRVTGEIA 1587
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 24/149 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--- 65
A+++E + + A D D + ++Y++ G P F ID S + ++
Sbjct: 898 AEVLEGTLAGTSVYHVVAIDLDEGLNGLVTYRMQVGMPRMDFVIDSSSGVVTTTTELDRE 957
Query: 66 ----YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
Y + + I+V +VND P VY ++E+ +V
Sbjct: 958 RIAEYFLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFSAVYNVSLLEDIPRDFRVVW 1017
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L +D D+ + +SY I+ GN + F I
Sbjct: 1018 LNCTDNDVGLNAELSYFITGGNIDGKFRI 1046
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 567 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYAVISVNR 626
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y +VEN
Sbjct: 627 PLDYEQIPNGMIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYSVTVVENIM 686
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 687 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 729
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP 62
P + + EN+ ++ + A+D D + ++Y I E+ F ID S L TG P
Sbjct: 2513 PQFSTSVYENEPAGTSVITMMATDQDEGENGELTYSIEGPGVEA-FQIDKDSGLVATGRP 2571
Query: 63 DQVY--------------------LIVYIQVQNVNDNVPMTLDPV--YYAQIVENQSGIL 100
Q Y ++Y++V +VNDN P+ + P I+E
Sbjct: 2572 LQSYERFNLTVVATDGGQPPLWGTTMLYVEVIDVNDNRPVFVRPPNGTILHILEEIPLRS 2631
Query: 101 PIVQLAASDGD--LDPDQRISYKISAGNPE-SYFNIDIGSG 138
+ ++ A+D D L+ R S+ +AGN + YF ID SG
Sbjct: 2632 NVYEVYATDKDEGLNGAVRYSFLKTAGNRDWEYFTIDPISG 2672
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D P+ +++ I+AGN + F I+ + D P+
Sbjct: 1871 VAHILASDADSGPNALLTFNITAGNRNNAFFINATTGIITVNRPLDRERIPEYKLTVSVK 1930
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASD 109
+ + ++ I +++ NDN P+ Y A+++EN P+ L A D
Sbjct: 1931 DNPENPRIARRDFDLLVISLEDENDNHPLFTQSTYQAEVMENSPAGTPVTVLNGPILALD 1990
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
DL + ++YK+ G F+ID +G
Sbjct: 1991 DDLGINAVVTYKL-LGAQSDLFDIDNATG 2018
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2078 HLLENCPAGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFTIHPVTGLIRVGNLTIDREE 2137
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + + +D P IV + + +VND+ P L+P+ ++E+ I +
Sbjct: 2138 QESYRLVVVAADRGTAPLSGTAIVTVLIDDVNDSCPEFLNPIQTVSVLESVDPGTIIANV 2197
Query: 106 AASDGDLDP 114
A D DL P
Sbjct: 2198 TAIDRDLSP 2206
>gi|17865345|ref|NP_446096.1| cadherin-23 precursor [Rattus norvegicus]
gi|17365948|sp|P58365.1|CAD23_RAT RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
gi|14625443|dbj|BAB61904.1| KIAA1774 protein [Rattus norvegicus]
Length = 3317
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--------------- 50
VY + E+ +V L +D D+ + +SY I+AGN + F
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 51 ----------------NIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
N+ +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1057 DRETTAAYTLVLEAIDNVPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1111
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F + + SG L
Sbjct: 1112 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLL 1157
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 596 YSIVNASAFGSYFDISVYEG 615
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTG 1688
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I +
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D R+ Y+I GN + F + + S L
Sbjct: 1119 IVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLLVRGPRPLDRERNSSHVLMAEA 1178
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND P+ Y + +GI ++ + A+D D
Sbjct: 1179 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTGD 1238
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y+I +G E F ID +G
Sbjct: 1239 GGLVNYRILSG-AEGKFEIDESTG 1261
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P V I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 2190 VIANVTAIDLDLNP--KLEYHILSIVAKDDTDRLVPDQEDAFAVNINTGSV 2238
>gi|47229646|emb|CAG06842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2982
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ + I+Q+ A+D D + + + I +GN F ID + DL D
Sbjct: 382 YVVQVPEDMAPNTEILQVTATDEDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLD 441
Query: 64 ----------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV +VNDN P+ + + A ++EN
Sbjct: 442 YEANKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYS 501
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y++++ P F I+ +G
Sbjct: 502 IIHIQAVDADSGDNSRLEYRLTSTTPNFPFAINNSTG 538
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-PESYFNIDIGSDLT------ 59
Y I EN ++ + A+DGD + I Y+I GN F ID S +
Sbjct: 274 YKENIRENLEIGYEVLTVRATDGDAPVNGNILYRIINGNGSNDVFEIDSRSGVIRTRGLV 333
Query: 60 --------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 334 DREQVEAYMLLVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDMAPN 393
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + + + I +GN F ID +G +
Sbjct: 394 TEILQVTATDEDRGSNAVVHFSIMSGNTRGQFYIDAQTGKM 434
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL- 58
+ A ++EN I+ + A D D + R+ Y++++ P F I+ + ++L
Sbjct: 488 FQATVLENVPLGYSIIHIQAVDADSGDNSRLEYRLTSTTPNFPFAINNSTGWIVVAAELD 547
Query: 59 ----------TGGPDQVYLI------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DQ Y + + + V +VNDN P YY ++ E+ + +
Sbjct: 548 RESVDFYNFGVEARDQGYPVMSSSASISMTVLDVNDNNPEFTQKAYYMRLNEDAAVGTSV 607
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D+ + ++Y+IS+GN + F+I SG
Sbjct: 608 LTVSAVDQDI--NSVVTYQISSGNTRNRFSITSQSG 641
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
YY ++ E+ + ++ ++A D D++ ++Y+IS+GN + F+I + +GG
Sbjct: 593 YYMRLNEDAAVGTSVLTVSAVDQDIN--SVVTYQISSGNTRNRFSI---TSQSGGGLITL 647
Query: 63 --------DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
++ Y++ V++ V + N + P+ Y I E++
Sbjct: 648 ALPLDYKLERQYVLTITASDGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINEDRPMGT 707
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D + RI+Y + P+ F+ID SG++
Sbjct: 708 TVVLISATDEDTGENARITYFMDDSIPQ--FDIDPDSGAV 745
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
I+E+ SGI+ ++ LD + Y + A F +D G P + ++
Sbjct: 843 IIESTSGIVRTLR------RLDRENVPVYNLQA------FAVDKGVPALKTP----VNIH 886
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ + EN L + ++A+D D + +I Y+I GN
Sbjct: 887 VTILDVNDNPPVFEKDELDIMVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEV 946
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 947 FQLDIFSGEL 956
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 695 YTVNINEDRPMGTTVVLISATDEDTGENARITYFMDDSIPQFDIDPDSGAVTTQMELDYE 754
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y ++E+ +
Sbjct: 755 DQVSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNGPRFLRDHYVGSVMEDVPVFTSV 812
Query: 103 VQLAASDGDLDPDQRISYKISAG 125
VQ++A+D D + R+ Y G
Sbjct: 813 VQVSATDRDSGLNGRVFYTFQGG 835
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 24/158 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
P Y A ++EN P++Q+ A+D DL + +++Y +G P S + G +T P
Sbjct: 1615 PEYEAHVMENLPAGSPVLQVLATDRDLGANGQVTYGGLSGGPFS-IHPQTGLIVTTHPLD 1673
Query: 63 ----DQVYLIVYIQ----------------VQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+Q L+VY Q V + ND+ P ++ ENQS + +
Sbjct: 1674 REEQEQHVLMVYAQDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSRVA-L 1732
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D D + R+ Y+++ G+PE F +D SG L
Sbjct: 1733 YTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVL 1770
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
+ E++ + + A D DL + R+SY + AGN + F+++
Sbjct: 1516 VTEDRPTGFVALHVVAQDNDLGENGRVSYSLRAGNGDGRFHLNPSTGALSVVRALNREEV 1575
Query: 54 IGSDLT------GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +LT G P + ++ I V +VND P P Y A ++EN P++Q+
Sbjct: 1576 VQHNLTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEAHVMENLPAGSPVLQVL 1635
Query: 107 ASDGDLDPDQRISYKISAGNPES 129
A+D DL + +++Y +G P S
Sbjct: 1636 ATDRDLGANGQVTYGGLSGGPFS 1658
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P + + V I VQ+VNDN P+ Y + E+ +++L A
Sbjct: 2521 YNLTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRLTAH 2580
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P + Y IS+G+ F I +G+L
Sbjct: 2581 DADSGPRGHVHYSISSGDQHGLFQIHESTGAL 2612
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ + V +VNDN P+ L P + + +G + + + A D DL + R+SY + AGN
Sbjct: 1492 VTARVFVTDVNDNAPVFLSPAAVSVTEDRPTGFVAL-HVVAQDNDLGENGRVSYSLRAGN 1550
Query: 127 PESYFNIDIGSGSL 140
+ F+++ +G+L
Sbjct: 1551 GDGRFHLNPSTGAL 1564
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 28/156 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
++ ENQS + + L A+D D D + R+ Y+++ G+PE F +D
Sbjct: 1722 EVPENQSRVA-LYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQ 1780
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ D P + V ++V ++NDN P Y ++ E+ ++QL
Sbjct: 1781 VAFYSLTVVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASYVVEVPEDLPVGSLVLQL 1840
Query: 106 AASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
A D D + +++Y + GN F I+ SG +
Sbjct: 1841 EAEDPDEGTNGQVTYYL--GNESLGMFQIEPQSGRI 1874
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + + + +Q++NDN P Y+ I EN I+Q+ ASD D + + Y+
Sbjct: 210 PRSSQMTLDVSIQDINDNAPAFNQSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYE 269
Query: 122 ISA--GNPESYFNIDIGSG 138
I+ +P+ YF ID +G
Sbjct: 270 INRRQSDPDQYFTIDSRTG 288
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 36 RISYKISAGNPESYFNIDIGS-----------DLTGGPDQV------------YLIVYIQ 72
RI+Y I +GN ++ F I S D P ++ + +
Sbjct: 2059 RITYSIISGNEKNAFLIQPSSGAISVQDSSSLDFEASPRLRLVVQAETTASFGFMAINLN 2118
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES-YF 131
+Q+VNDN+P Y A I E+QS P++Q+ A D D + +++Y I+ P + +
Sbjct: 2119 LQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNGQVTYAINQSLPMTGLY 2178
Query: 132 NIDIGSGSL 140
+ID +G++
Sbjct: 2179 HIDPQTGTI 2187
>gi|22090628|dbj|BAC06834.1| Ap-cadherin [Asterina pectinifera]
Length = 2909
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSD 57
P+Y I E++ ++Q+ A+D +DPD Y I+A N F +D I S
Sbjct: 1281 PMYTRTIREDEPVGYEVIQVTATD--VDPDSIPRYLITANNTGGAFEVDPATGAISIASP 1338
Query: 58 LTGGPDQVYLIVY--------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
L + Y ++Y IQ++NVND P PVY A++ EN + +
Sbjct: 1339 LDYETQREYWLMYSANDGLNVASTVIRIQLENVNDEKPEFELPVYTAEVSENDPNVPRQL 1398
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+Q+ A DGD D Q I Y + + F ID +G +
Sbjct: 1399 LQVTAVDGDADAVQADIRYSLEGTGAGTTFTIDAVTGQI 1437
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GGP++ YL V I V + NDN P+ P+Y I E++ ++Q+ A+ D+DPD
Sbjct: 1255 GGPNKGYLRVVINVVDKNDNPPVFDRPMYTRTIREDEPVGYEVIQVTAT--DVDPDSIPR 1312
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+A N F +D +G++
Sbjct: 1313 YLITANNTGGAFEVDPATGAI 1333
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 31 LDPDQRISYKISAGN-PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
+DP + +I GN PE+ + ++ + T G V IQV ++NDN P+ D Y
Sbjct: 796 IDPQTGVISRIGTGNLPEASYRFNVTA--TDGKYTSDAEVEIQVNDINDNTPIFPDCNSY 853
Query: 90 AQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A + + I ++++ A+D D + I+Y I+ N + F ID +G +
Sbjct: 854 APSISESAAIGTFLIKVQATDADKGVNAEIAYDIAGSN--NPFTIDAVTGDI 903
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 31/146 (21%)
Query: 5 PVYYAQIVENQSGI-LPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGS---DLT 59
PVY A++ EN + ++Q+ A DGD D Q I Y + + F ID + LT
Sbjct: 1381 PVYTAEVSENDPNVPRQLLQVTAVDGDADAVQADIRYSLEGTGAGTTFTIDAVTGQITLT 1440
Query: 60 GGPDQVYLIVY-----------------------IQVQNVNDNVPMTLDPVYYAQIVENQ 96
D+ + ++ + V + NDN P + Y + EN
Sbjct: 1441 EMLDRESVSIWKLLVKATDGGGTGTSLTGYADLEVTVLDENDNSPFFPELEYRGSVPENS 1500
Query: 97 SGILPIVQLAASDGDLDPDQ--RISY 120
G P++Q+ A D D DP+Q RI+Y
Sbjct: 1501 PGGTPVMQVTAIDYD-DPNQFGRITY 1525
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 32/158 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQ--RISYKISAGNP--------------ESYF 50
Y + EN G P++Q+ A D D DP+Q RI+Y + + +
Sbjct: 1492 YRGSVPENSPGGTPVMQVTAIDYD-DPNQFGRITYSTISSSEIPNDGSGLFQIDGSTGWV 1550
Query: 51 NIDIGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ G+ L + Y + IQ+ +VNDN P+ + Y + E
Sbjct: 1551 TVKSGAVLDREKNDTYTLRIRASDVPNSEALTDAIIQILDVNDNAPVFVGGPYATSVEET 1610
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
Q + +++ +D D+D ++ + + I GN F I
Sbjct: 1611 QPVGATVWEVSVTDADVDFNEEVQFGIIGGNVGGSFEI 1648
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+AQ+ EN +VQ++A D DL + + Y I +GN + + +D S L
Sbjct: 2570 YHAQVSENSQLGTKLVQVSAHDPDLGTNGLVRYDIISGNSKGHLKLDPQSGLLVVNNSLD 2629
Query: 60 ---------------GGPDQ-----VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GG + IV+I V + NDN P + P ++EN
Sbjct: 2630 YEKDSKYILTIRASDGGKSSENHKVAFTIVFITVLDENDNTPYFMFPTVNCSVLENLPAF 2689
Query: 100 LPIVQLAASDGDLDPDQRISYKI--------SAGNPESY--FNIDIGSGSL 140
+ + A D DL P +++Y + +GNPE F ID +G +
Sbjct: 2690 THVCSVHAVDNDLGPYGQLTYSVMSSCFMNYGSGNPERKEAFAIDPLTGDI 2740
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 35/155 (22%)
Query: 21 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIG------------------------ 55
++ L+A D D P+ + Y I+ GN E F +++
Sbjct: 2468 LLTLSAEDQDWSPENTYLDYTITRGNEEKRFCLEVKMVQIENQIKNVGKLVLCNALDRET 2527
Query: 56 ----------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SD P +V + V + NDN P+ Y+AQ+ EN +VQ+
Sbjct: 2528 TESYALTVSVSDRGMPPLNSSTVVMVTVTDCNDNAPVFSSTEYHAQVSENSQLGTKLVQV 2587
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+A D DL + + Y I +GN + + +D SG L
Sbjct: 2588 SAHDPDLGTNGLVRYDIISGNSKGHLKLDPQSGLL 2622
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY A + EN I ++ A++ QRI+Y I +GN F+I+ +
Sbjct: 2040 VYNASVKENSRAGTWIAKVEANEQS-SSRQRITYTIFSGNENQVFSINRHTGEIRVQKDN 2098
Query: 57 --DLTGGPD------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P + V I + ++NDN P Y + E Q I
Sbjct: 2099 SLDFEVNPHIQLVVLADSGLQTAHCRVSITLVDINDNAPQFEHSSYRTAVWEGQVHNTYI 2158
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+Q+ ASD D + +I Y I +GN F +D G L
Sbjct: 2159 MQVFASDADSGMNGQIEYSILSGNLNGAFILDSVRGILA 2197
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y+A I E + +++++A D D + ++Y ++ N + F ID
Sbjct: 1834 YHASISEGLAAGAEVLRVSALDPDEGSNGEVTYSLTDDNSQGAFLIDAFTGAIRTTRSLD 1893
Query: 54 -----------IGSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D T GP V IQV++VNDN+P+ + A +
Sbjct: 1894 RESRAQYSLRAVATDGCTQGPLSSLASVTIQVEDVNDNMPVCEQTPFNAWVSMRTLPNQI 1953
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + I Y +S + E+ F+I+ +G +
Sbjct: 1954 VTTVTATDRDQGENGTIHYALS--DEENLFDINTETGEI 1990
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP---- 62
AQ++E+ + A DGD + +S+ I +GN + F ++ G L P
Sbjct: 1522 AQVMEDAEVGSLLHHFVAIDGDQGENGIVSFSIISGNKKGLFTLEEKTGLLLLTAPLDYE 1581
Query: 63 -DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++ + + + ++V +VND P+ +Y A + EN+ P+++
Sbjct: 1582 TERFHRLTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTATVAENRDPGEPVIR 1641
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++A+D D + + + Y + G F+I+ +G
Sbjct: 1642 VSATDEDSEENAVVWYSLLPGPGYELFSINPYTG 1675
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP-- 62
P Y A I EN P++Q+ A+D DL + +++Y +G P S + G +T P
Sbjct: 1345 PEYEAHITENLPAGSPVLQVLATDRDLGANGQVTYGGLSGGPFS-IHPQTGLIVTTHPLD 1403
Query: 63 ----DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+Q L+VY I V + ND+ P ++ ENQS + +
Sbjct: 1404 REEQEQHVLMVYARDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSRVA-L 1462
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D D + R+ Y+++ G+PE F +D SG L
Sbjct: 1463 YTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVL 1500
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P + + V I VQ+VNDN P+ Y + E+ ++++ A
Sbjct: 2264 YNLTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRVTAH 2323
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P + Y IS+G+ F I +G+L
Sbjct: 2324 DADSGPRGHVHYTISSGDQHGLFQIHESTGAL 2355
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
++ I V +VND P P Y A I EN P++Q+ A+D DL + +++Y +G P
Sbjct: 1327 LLSILVLDVNDEAPTFEKPEYEAHITENLPAGSPVLQVLATDRDLGANGQVTYGGLSGGP 1386
Query: 128 ES 129
S
Sbjct: 1387 FS 1388
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R SY + E+Y D GS P + + + VQ++NDN P Y+
Sbjct: 189 LDRENRSSYSLVL---EAY---DGGSP----PRSSQMTLDVSVQDINDNAPTFNQSRYHT 238
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
I EN I+Q+ ASD D + + Y+I+ +P+ YF ID +G
Sbjct: 239 LISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDSRTG 288
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 25/135 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
++ ENQS + + L A+D D D + R+ Y+++ G+PE F +D
Sbjct: 1452 EVPENQSRVA-LYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQ 1510
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ D P + V +QV ++NDN P Y ++ E+ ++QL
Sbjct: 1511 VAFYSLTVVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASYVVEVPEDLPVGSLVLQL 1570
Query: 106 AASDGDLDPDQRISY 120
A D D + +++Y
Sbjct: 1571 EAKDPDEGTNGQVTY 1585
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 36 RISYKISAGNPESYFNIDIGS-----------DLTGGPDQV------------YLIVYIQ 72
RI+Y I +GN ++ F I S D P ++ + +
Sbjct: 1802 RITYSIISGNEKNAFLIQPSSGAISVQDSSSLDFEASPRLRLVVQAETTASFGFMAINLN 1861
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES-YF 131
+Q+VNDN+P Y A I E+QS P++Q+ A D D + +++Y I+ P + +
Sbjct: 1862 LQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNGQVTYAINQSLPMTGLY 1921
Query: 132 NIDIGSGSL 140
+ID +G++
Sbjct: 1922 HIDPQTGTI 1930
>gi|410900464|ref|XP_003963716.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Takifugu rubripes]
Length = 3370
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 36/149 (24%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-------------------------- 54
+ +LA SD D + +SY I+ GN + F++
Sbjct: 1019 VSRLACSDNDAGLNAELSYFITGGNQDGKFSVGFRDGIVRTVVRLDRETQAAYTLIVEAI 1078
Query: 55 -----GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
GS TG V+++VQ+VNDN P+ L Y I+E+ I+Q+ A+D
Sbjct: 1079 DNGPAGSRRTGTA-----TVFVEVQDVNDNRPIFLQNSYETGILESVPQGTSILQVQATD 1133
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
D + R+ Y+I GN + F+ID +G
Sbjct: 1134 ADQGENGRVLYRILTGNSNNLFSIDRQTG 1162
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ + + V +VNDN P+ Y + EN+ + P+ ++ A+D D P+ ++
Sbjct: 542 GGGEETTGRIRVNVLDVNDNGPLFQKEAYVGSLRENEQAVQPVARVRATDEDSPPNNFLT 601
Query: 120 YKI-SAGNPESYFNI 133
Y + SA YF+I
Sbjct: 602 YTVASASAFAGYFSI 616
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + L ASD D + ++ Y I+ G+ +
Sbjct: 1758 EVTEGQPGPR-VWTLRASDEDSGLNGKVEYSITGGDHQNEFMISPVEGELRVRKDVELDR 1816
Query: 48 ---SYFNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++NI + + G P + ++V + V+++NDN P+ L+ + + E +
Sbjct: 1817 ETTAFYNITVTARDLGTPSRNSSVVVGVHVRDINDNDPVLLNLPHNTSVREGAPIHTSVA 1876
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ A D D + ++Y I+AGN + F I+ SG
Sbjct: 1877 RVQAEDADSGRNALLTYNITAGNLDGAFYINDTSG 1911
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + +VNDN P+ Y I EN G ++++ A+D D+ P+ + Y I+AGN +
Sbjct: 1520 INILDVNDNAPVIESQKGYNVSISENVGGGTSVLRVMATDRDIGPNAMLFYYITAGNQDL 1579
Query: 130 YFNIDIGSGSL 140
F +D +G +
Sbjct: 1580 TFRMDRMTGEM 1590
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 49 YFNIDIGSDLTGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+ N I + G P ++ L V++++ +VNDN P+ L P Y + EN IV+++A
Sbjct: 2372 WLNFTIRAQDHGSPPRIAELPVFLRIVDVNDNNPVFLQPSYQEPVFENVDLGTTIVRVSA 2431
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D I Y + G E F I +G +
Sbjct: 2432 TDADSGRFAAIEYSLVDG--EGKFAIKPSTGEI 2462
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT--GGP 62
Y I EN G ++++ A+D D+ P+ + Y I+AGN + F +D G +T P
Sbjct: 1538 YNVSISENVGGGTSVLRVMATDRDIGPNAMLFYYITAGNQDLTFRMDRMTGEMVTRPAPP 1597
Query: 63 D----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D Q Y++ +Y+ + + NDN P + Y + E +
Sbjct: 1598 DRERQQEYILNVTVEDDGTPPLSSPTTIYVHIVDENDNAPEFPEEEYVTVLSEGPDTVGA 1657
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A D D + + Y I+ GN F+I+ +G +
Sbjct: 1658 TIATVTAIDPDEGLNGTLRYAITQGNLIQTFHINSITGRI 1697
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-TGGP--- 62
Y I+E+ I+Q+ A+D D + R+ Y+I GN + F+ID + L + GP
Sbjct: 1112 YETGILESVPQGTSILQVQATDADQGENGRVLYRILTGNSNNLFSIDRQTGLVSRGPRPL 1171
Query: 63 -----------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
V +I+Y V + ND VP+ Y + +GI
Sbjct: 1172 DRETSNSHVLEVEAYNSDEGNMRSSVRVIIY--VNDANDEVPVFTQQQYNRLGLRETAGI 1229
Query: 100 -LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y + +G+ + F +D+ +G
Sbjct: 1230 GTSVIVVRATDPDTGDGGAVAYAVVSGS-DRKFEVDVSTG 1268
>gi|444713166|gb|ELW54074.1| Protocadherin alpha-10 [Tupaia chinensis]
Length = 1198
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 37/149 (24%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS--------DLT------------------ 59
ASD D+ + +++Y++S P YF++DI S DL
Sbjct: 752 ASDADVGANAQLTYRLS---PNEYFSLDIPSNDEQLKPLDLVLKKPLDREVASELLLVLR 808
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG ++ L ++I V +VNDN PM VY +++EN P+++L ASD D
Sbjct: 809 ATDGGKPELTGILELHITVLDVNDNAPMFDKAVYNVKVLENARNGTPVIRLNASDLDEGS 868
Query: 115 DQRISYKIS---AGNPESYFNIDIGSGSL 140
+ I Y + + N ES F ID SG +
Sbjct: 869 NSHIVYSFASDISSNIESSFRIDADSGEI 897
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI----------------- 68
ASD D+ + ++YK+S P +F +DI + G V ++
Sbjct: 157 ASDADVGENAMLTYKLS---PNDFFILDIINKKDKGKFPVLVLRKLLNREENPQFKLLLT 213
Query: 69 --------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ IQV + NDN PM VY ++ EN++ ++QL ASD D
Sbjct: 214 ATDGGKPEFTGSVSLLIQVLDANDNAPMFDRSVYEVKMYENEANQTLVIQLNASDADEGI 273
Query: 115 DQRISYKIS 123
++ ++Y S
Sbjct: 274 NKEMTYSFS 282
>gi|47216565|emb|CAG04743.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1526
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 37/169 (21%)
Query: 2 TLDP-VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------ 54
T DP VY + E+ + +LA SD D + +SY I+ GN + F++
Sbjct: 837 TFDPRVYNVSLKESIPRDHVVARLACSDNDAGLNAELSYFITGGNQDGKFSVGFRDGIVR 896
Query: 55 -------------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
GS TG V+++VQ+VNDN P+ L Y
Sbjct: 897 TVVGLDRETQAAYTLIVEAIDNGPAGSRRTGTA-----TVFVEVQDVNDNRPIFLQNSYE 951
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++E+ I+Q+ A+D D + + Y+I GN + F+ID +G
Sbjct: 952 TSVLESVPQGTSILQVQATDADQGENGSVLYRILTGNSNNLFSIDRQTG 1000
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ + + V +VNDN P+ Y + EN+ + P+ +L A+D D P+ ++
Sbjct: 412 GGGEETTGRIRVNVLDVNDNAPLFQKEAYVGSLRENEQAVQPVARLRATDEDSPPNNFLT 471
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y ISA SYF+I + G
Sbjct: 472 YTIISASAFPSYFSIIMVEG 491
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + +VNDN P+ Y I EN G ++++ A+D D+ P+ + Y I+AGN +
Sbjct: 1346 INILDVNDNAPVIESQKGYNVSISENVGGGTSVLRVMATDRDIGPNAMLFYYITAGNQDL 1405
Query: 130 YFNIDIGSGSL 140
F +D +G +
Sbjct: 1406 TFRMDRMTGEM 1416
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT--GGP 62
Y I EN G ++++ A+D D+ P+ + Y I+AGN + F +D G +T P
Sbjct: 1364 YNVSISENVGGGTSVLRVMATDRDIGPNAMLFYYITAGNQDLTFRMDRMTGEMVTRPAPP 1423
Query: 63 DQVYLIVYIQVQNVNDN--VPMT-----LDPVYYAQIVEN--QSGILP 101
D+ YI V D+ P++ L +++ +V+N +SG LP
Sbjct: 1424 DRERQQEYILTVTVEDDGTPPLSVSCRELQELHWFSMVQNSMRSGFLP 1471
>gi|301621845|ref|XP_002940255.1| PREDICTED: protocadherin Fat 3-like [Xenopus (Silurana) tropicalis]
Length = 1106
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------------- 56
PI+ + A+D D + ++ Y IS GN +S FNID+ +
Sbjct: 746 PILLIRATDADSGFNGKVLYTISDGNMDSCFNIDMETGQLKVMMPMDRETTDRYILNITV 805
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
DL + ++ I V + NDN P+ L+ Y A +E+ S ++Q+ A D DL P+
Sbjct: 806 YDLGNPQRSSWRLLTIHVNDANDNSPVFLEGSYSANTLESTSIGTELIQVEARDKDLGPN 865
Query: 116 QRISYKI 122
++Y I
Sbjct: 866 GEVTYSI 872
>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
Length = 3246
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y + EN + +V+L +D D+ + +SY I+ GN + F++ +
Sbjct: 949 IYNVSLPENVARDFRVVRLNCTDADVGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSL 1008
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
TG VY+ V +VNDN P+ L Y + E+
Sbjct: 1009 DRETVASYTLILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAA 1068
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IVQ AA+D D + R+ Y+I GN ++F I+ +G
Sbjct: 1069 SSIVQ-AATDADEGVNGRVWYRIIKGNEHNHFRINPSTG 1106
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y + EN + ++Q+ A+D D+ ++SY S + D G L
Sbjct: 414 LYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVILLTARLDF 473
Query: 60 --------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
GG ++ V I + +VNDNVP Y + EN+ + +V+L
Sbjct: 474 ETTQRYTLTIIARDGGGEETTGRVRINILDVNDNVPTFQKEAYLGALRENEPSVTQVVRL 533
Query: 106 AASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
ASD D P+ +I+Y I A YF+I + G
Sbjct: 534 RASDEDSSPNNQITYSIVQASAFRDYFDIAVLDG 567
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I E + Q+ A D D P+ +++Y++ G P F I+ S L T D
Sbjct: 845 FAAEIAEGLPAGSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSTSGLVTSTAVLD 904
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P +Y + EN + +
Sbjct: 905 RERIAEYYLRVVASDAGVPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFRV 964
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V+L +D D+ + +SY I+ GN + F++ G
Sbjct: 965 VRLNCTDADVGLNAELSYFITGGNQDGKFSVGFRDG 1000
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + EN G + Q+ A+D D+ + +SY I+ GN + F +D
Sbjct: 1467 YNVSVSENVGGGTAVAQVRATDRDVGLNSVLSYYITRGNEDLTFRMDRVTGEIATRPSPP 1526
Query: 54 -----------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ + G P VY+ + + NDN P +Y + E + +
Sbjct: 1527 DRERQSFYSLVVTVEDEGNPSLSATTTVYVTILDENDNTPAFQQQLYEVTLDEGPATLNA 1586
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D D P+ ++Y I+ GN F+ID +G +
Sbjct: 1587 TLVTVQALDWDEGPNGTVAYDITEGNILGTFHIDSATGQI 1626
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES-------------------------YFNIDIG 55
+ A D D P ++ Y I AG+P ++N+ I
Sbjct: 1697 VWTFLAHDDDSGPSGQVEYSIVAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNLTIA 1756
Query: 56 SDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ G P ++V I+V ++NDN P+ L+ + EN + ++ A D D P
Sbjct: 1757 ARDRGVPPLSSTMMVGIRVLDINDNDPVLLNLPMNLTLSENTPVSSFVTRILARDADKGP 1816
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +++ I++GN E+ F I+ SG
Sbjct: 1817 NALLTFDITSGNTENAFYINSTSG 1840
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + I+ + V +VNDN P+ P Y + EN G + Q+ A+D D+ + +SY
Sbjct: 1440 PRRKEHILRVNVLDVNDNPPVIDSPFGYNVSVSENVGGGTAVAQVRATDRDVGLNSVLSY 1499
Query: 121 KISAGNPESYFNIDIGSGSLG 141
I+ GN + F +D +G +
Sbjct: 1500 YITRGNEDLTFRMDRVTGEIA 1520
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
L Y + E+ IVQ AA+D D + R+ Y+I GN ++F I+ + L
Sbjct: 1053 LQSSYEVSVPEDIPAASSIVQ-AATDADEGVNGRVWYRIIKGNEHNHFRINPSTGLVMRG 1111
Query: 60 ----------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V + V++VND VP+ Y + +
Sbjct: 1112 VRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETA 1171
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
GI + + A+D D +SYKI +G E F ID +G
Sbjct: 1172 GIGTSVAVVRATDRDTGNGGLVSYKILSG-AEGKFEIDESTG 1212
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F+ID SG +
Sbjct: 1256 RQFSIDRFSGQV 1267
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 MYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GALP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2277 RTILQVVARDDDQGPNSQLSYVLLGGNEDNAFAL-TASGEL 2316
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + AGN S ID LTG D+ + Y
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAI 2211
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GALPRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRVTQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V I V ++NDNVP +Y+ I E+
Sbjct: 2323 DREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAATNAVISYSIIGGN--SQFTINPSTGQI 2419
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ +++Y+
Sbjct: 2650 PFSSYEKLDITVLDINDNAPAFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLAYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 2709 IVNGNQESSFTINHATGEI 2727
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A + E + + +++++ASD D + I Y I GN E F+ID S
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEERQFSIDRFSGQVTLV 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P LI + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------D 57
A I E+ S + ++A D D + ISY IS+GN E F I+ + +
Sbjct: 3098 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3157
Query: 58 LTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
L+ + Y + + V +VNDN P+ + ++ ++EN ++
Sbjct: 3158 LSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIH 3217
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3218 LNATDADSGANAVIAYTVQSSDSD-LFVIDPNTG 3250
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+DGDL + + + + A + + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRL 641
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 2990 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDNDTGWISIASSL 3049
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q + I ++I V N + P A I E+ S
Sbjct: 3050 VSDLNQNFFIRVTAKDKGNPPLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSV 3109
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY IS+GN E F I+ +G
Sbjct: 3110 VRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTG 3146
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ +++Y+I GN ES F I+
Sbjct: 2674 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLAYEIVNGNQESSFTINHATGEIRSIR 2731
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I V + NDN P ++ A + EN
Sbjct: 2732 PLDREKISYYELTVKSSDKGSPSQSTSVKVIISVLDENDNAPR-FSQIFSAYVSENSPLG 2790
Query: 100 LPIVQLAASDGDLDPDQRISYKIS 123
+ ++ SD D+ + Y I+
Sbjct: 2791 YTVTRVTTSDEDIGINAISRYSIA 2814
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3201 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ+ N+ VP + +YY ++ E +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEEKCSFATVNIQLMGTNEYVPRFVSKLYYFEVSEAAPRGTAV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I +G +
Sbjct: 3320 GEVFASDRDMGADGEVHYLIFGNSRKKGFQIHKMTGQI 3357
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V I V+++NDN P L V VEN I Q A D D + R+ Y + NP
Sbjct: 878 VVNITVKDLNDNAPHFLQAVESIDAVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQ-NP 936
Query: 128 ESYFNIDIGSGSL 140
++ F I+ +G++
Sbjct: 937 KNLFTINEQNGNI 949
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F+ID SG +
Sbjct: 1256 RQFSIDRFSGQV 1267
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 MYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GALP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2277 RTILQVVARDDDQGPNSQLSYVLLGGNEDNAFAL-TASGEL 2316
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + AGN S ID LTG D+ + Y
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAI 2211
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ +++Y+
Sbjct: 2648 PFSSYEKLDITVLDINDNAPAFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLAYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 2707 IVNGNQESSFTINHATGEI 2725
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A + E + + +++++ASD D + I Y I GN E F+ID S
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEERQFSIDRFSGQVTLV 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P LI + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------D 57
A I E+ S + ++A D D + ISY IS+GN E F I+ + +
Sbjct: 3096 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3155
Query: 58 LTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
L+ + Y + + V +VNDN P+ + ++ ++EN ++
Sbjct: 3156 LSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGANAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+DGDL + + + + A + + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRL 641
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GALPRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRVTQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V I V ++NDNVP +Y+ I E+
Sbjct: 2323 DREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + IS I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAATNAVIS--IIGGN--SQFTINPSTGQI 2417
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 2988 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDNDTGWISIASSL 3047
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q + I ++I V N + P A I E+ S
Sbjct: 3048 VSDLNQNFFIRVTAKDKGNPPLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSV 3107
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY IS+GN E F I+ +G
Sbjct: 3108 VRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTG 3144
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ +++Y+I GN ES F I+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLAYEIVNGNQESSFTINHATGEIRSIR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I V + NDN P ++ A + EN
Sbjct: 2730 PLDREKISYYELTVKSSDKGSPSQSTSVKVIISVLDENDNAPR-FSQIFSAYVSENSPLG 2788
Query: 100 LPIVQLAASDGDLDPDQRISYKIS 123
+ ++ SD D+ + Y I+
Sbjct: 2789 YTVTRVTTSDEDIGINAISRYSIA 2812
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ+ N+ VP + +YY ++ E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEEKCSFATVNIQLMGTNEYVPRFVSKLYYFEVSEAAPRGTAV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I +G +
Sbjct: 3318 GEVFASDRDMGADGEVHYLIFGNSRKKGFQIHKMTGQI 3355
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V I V+++NDN P L V VEN I Q A D D + R+ Y + NP
Sbjct: 878 VVNITVKDLNDNAPHFLQAVESIDAVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQ-NP 936
Query: 128 ESYFNIDIGSGSL 140
++ F I+ +G++
Sbjct: 937 KNLFTINEQNGNI 949
>gi|443728421|gb|ELU14777.1| hypothetical protein CAPTEDRAFT_226654 [Capitella teleta]
Length = 2555
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y + EN + ++ + A D D PD + P Y G P+Q
Sbjct: 788 YAGSVAENLNPGTEVITVTAMDRDEFPDYNKKMARXSDRPNHY--------PPGTPNQGE 839
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
V I+V ++NDN P D VY A++ EN I+ + A DLD + R++Y I+ GN
Sbjct: 840 AEVQIRVTDMNDNTPFFADRVYTARVPENSDSGAVIITVTAK--DLDEENRLTYSITGGN 897
Query: 127 PESYFNI--DIG 136
+ F + D+G
Sbjct: 898 VGNAFEVVPDVG 909
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGS----- 56
D VY A++ EN I+ + A D LD + R++Y I+ GN + F + D+G
Sbjct: 858 DRVYTARVPENSDSGAVIITVTAKD--LDEENRLTYSITGGNVGNAFEVVPDVGEIKVRG 915
Query: 57 --DLTGGPDQVYL-------------IVYIQVQNVNDNVPMTLDPVY-YAQIVENQSGIL 100
D GP + +L +V I++ +VNDN P + +Y + + E + GI
Sbjct: 916 NLDYEEGPREYHLEYRVFDDKFSNNTMVVIEILDVNDNPPRFDNAIYNESSLFEEEPGIS 975
Query: 101 P-----IVQLAASDGDLDPDQRISYKISA 124
++ + A+D D +I Y ++
Sbjct: 976 MNHPKYLLTVRATDPDTSRHSKIRYSLTG 1004
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E +NI + + G P +V I + +VND+ P P+Y A + EN I +
Sbjct: 1148 EEEYNIIVQAKDKGSPPMSSSAVVTIVITDVNDHPPKFTQPIYKATMSENYKAGASITSV 1207
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNI 133
+A+D D+ R++Y ++ + YF++
Sbjct: 1208 SATDKDMGIHARLTYILNTQD-RKYFSM 1234
>gi|47220482|emb|CAG03262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4006
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSDL--- 58
L P Y + E+ ++Q++A+D D + R+ Y G + + F I+ S +
Sbjct: 1563 LSPRYQGSVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGILRT 1622
Query: 59 --TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P + + + + V +VND P+ + + EN + + Q+ A+D D +
Sbjct: 1623 IEACPPQRTPVHIQVTVLDVNDKAPVFPADDFEVLVKENSAVGSVVAQITATDPDEGANA 1682
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+I Y+I GN F +DI SG L
Sbjct: 1683 QIMYQIVEGNIPEIFQMDIFSGEL 1706
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG--- 60
Y I EN PI+QL A+D D + I Y+ + F ID S L
Sbjct: 1041 YRETIRENVEEGYPILQLRATDSDSPTNANIRYRFIGDMVAVARAAFEIDPRSGLITTRG 1100
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V + NDNVP + Y + EN
Sbjct: 1101 VVDRELNEHYTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKENVR 1160
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + + Y I +GN F+ID +G +
Sbjct: 1161 PHSEILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEI 1203
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y + EN I++++A+D D D + + Y I +GN F+ID + + L
Sbjct: 1151 YVVAVKENVRPHSEILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEIQVVAPLD 1210
Query: 60 GGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y IV +QV +VNDN P+ + + A ++E+
Sbjct: 1211 YEAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASVLESSPVGSS 1270
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ YK++ + ++ F I+ +G
Sbjct: 1271 ILHIQAIDTDSGDNARLEYKLTGTSSDTPFIINSATG 1307
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+V ++A+D D+ + RI+Y + P+ F ID I +
Sbjct: 1478 VVMISATDDDVGENARITYLLEDNIPQ--FRIDSATGAITLQAELDYEDQMTYTLAITAK 1535
Query: 58 LTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
G P D Y V + V +VNDN P L P Y + E+ ++Q++A+D D
Sbjct: 1536 DNGIPQKSDTTY--VEVNVNDVNDNAPQFLSPRYQGSVSEDAPPFTSVLQISATDRDAHA 1593
Query: 115 DQRISYKISAG-NPESYFNIDIGSGSL 140
+ R+ Y G + + F I+ SG L
Sbjct: 1594 NGRVQYTFQNGEDGDGDFTIEPTSGIL 1620
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ A ++E+ I+ + A D D + R+ YK++ + ++ F I+ +
Sbjct: 1257 FQASVLESSPVGSSILHIQAIDTDSGDNARLEYKLTGTSSDTPFIINSATGWVTVRSTLD 1316
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V I V +VNDN P L YYA++ E+ + +
Sbjct: 1317 RESVEHYFFGVEARDYGTPPLSATASVTITVMDVNDNHPEFLQKEYYARLNEDAAVGTSV 1376
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
V + A D D+ + ++Y+I+ GN + F I G+
Sbjct: 1377 VTVTAVDRDV--NSAVTYQITGGNTRNRFAISTAGGA 1411
>gi|348507537|ref|XP_003441312.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Oreochromis niloticus]
Length = 3017
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ + I+Q+ A+D D + + + I +GN F ID + DL D
Sbjct: 482 YVVQVPEDMTPNTEILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLD 541
Query: 64 ----------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV +VNDN P+ + + A ++EN
Sbjct: 542 YEANKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYS 601
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y+++ P F+I+ +G
Sbjct: 602 IIHIQAVDADSGENSRLEYRLTETTPNFPFSINNSTG 638
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP V+I V++ NDN P + Y Q+ E+ + I+Q+ A+D D + + +
Sbjct: 455 GPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDMTPNTEILQVTATDQDRGSNAVVHF 514
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN F ID +G +
Sbjct: 515 SIMSGNTRGQFYIDAQTGKM 534
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSDLT------ 59
Y I+E+ +VQ++A+D D + R+ Y G + + F I+ S +
Sbjct: 898 YVGAIMEDVPVFTSVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRL 957
Query: 60 ----------------GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILP 101
G + V IQV +VNDN P+ + + EN L
Sbjct: 958 DRENVPIYTLQAFAVDKGIPALKTPVNIQVTILDVNDNPPVFEKDEFDIMVEENSPIGLV 1017
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++A+D D + +I Y+I GN F +DI SG L
Sbjct: 1018 VAHISATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGEL 1056
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 795 YTVSINEDKPVGTTVVVISATDEDTGENARITYFMDDSIPQFDIDPDTGAVTTQMELDYE 854
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y I+E+ +
Sbjct: 855 DQVSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNSPRFLRDHYVGAIMEDVPVFTSV 912
Query: 103 VQLAASDGDLDPDQRISYKISAG 125
VQ++A+D D + R+ Y G
Sbjct: 913 VQVSATDRDSGLNGRVFYTFQGG 935
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL- 58
+ A ++EN I+ + A D D + R+ Y+++ P F+I+ + +L
Sbjct: 588 FQATVLENVPLGYSIIHIQAVDADSGENSRLEYRLTETTPNFPFSINNSTGWIVVADELD 647
Query: 59 ----------TGGPDQVYLI------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D Y + + + + +VNDN P YY ++ E+ +
Sbjct: 648 RESVDFYNFGVEARDHGYPVMSSSASISMTILDVNDNNPEFTQKAYYMRLNEDAVVGTSV 707
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V ++A D D+ + ++Y+I++GN + F+I SG
Sbjct: 708 VTVSAVDQDI--NSVVTYQIASGNTRNRFSITSQSG 741
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 24/126 (19%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSDLTGGPDQVYLI 68
++ Q+G L V+ + D + +R S+++ A G+P N
Sbjct: 402 IDTQTGALTTVK----ELDREKHERFSFRVEARDQGDPVRSANAG--------------- 442
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNP 127
V I +++VNDN P+ P Y++IV ++ + P+V + ASD D D R++Y I++GN
Sbjct: 443 VEINIRDVNDNNPI-FKPKVYSEIVSEEAMLGSPVVYVTASDADADEHSRVTYSITSGND 501
Query: 128 ESYFNI 133
+ FNI
Sbjct: 502 MNAFNI 507
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 3 LDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--------- 52
P Y++IV ++ + P+V + ASD D D R++Y I++GN + FNI
Sbjct: 457 FKPKVYSEIVSEEAMLGSPVVYVTASDADADEHSRVTYSITSGNDMNAFNIISQMGQGLI 516
Query: 53 DIGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ L Y++ V+I V + N P+ + Y ++ E+ S
Sbjct: 517 TVARPLNFKEKSRYILTVTASDPGNLVDTATVFINVSDANTYRPVFQETPYTVRVDEDTS 576
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ A+D D + RISY + + F ID+ +G +
Sbjct: 577 VGTTIFQVTATDLDSGDNARISYTM---DESEMFAIDVETGEI 616
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID--------- 53
+Y + E QS I + ASD D R++Y + A G ++ F ID
Sbjct: 33 LYVKNVPEEQSPGFTIDTITASDPDEGDAGRLTYSLLATRDGRSQNMFTIDPSSGQLTTT 92
Query: 54 ---------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I SD G P Q Y + I V ++ND+ P+ Y + E+ S
Sbjct: 93 QSLDRESIATHHLQIIASDY-GHPSQSAYASLIIYVDDINDHAPLFEQKSYQRDVTESSS 151
Query: 98 GILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I+ + ASD D + I Y I + P FNID GS+
Sbjct: 152 IGSTIITVRASDEDSGHNGEIEYSILNPSGPNEVFNIDPRVGSI 195
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y ++ E+ S I Q+ A+D D + RISY + + F ID+ +
Sbjct: 567 YTVRVDEDTSVGTTIFQVTATDLDSGDNARISYTM---DESEMFAIDVETGEIFIKEGLD 623
Query: 57 -DLT------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+LT G P + + I V ++NDN P L+P Y ++ E+ I
Sbjct: 624 RELTPSYTLSVTATDHGRPSKADTTDIEITVADINDNDPKFLEPKYTGRVDEDAFVGTSI 683
Query: 103 VQLAASDGDLDPDQRISYKISAG-NPESYFNID 134
++++A+D D + R+ Y G + + +F+ID
Sbjct: 684 LKISATDADSGLNGRVRYTFEGGFSGDGHFSID 716
>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
Length = 3262
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
Y+ Q+ EN + +VQ+ A D DL P+ + + I +GN + ++ +D
Sbjct: 2565 YHTQVRENSAVGTHLVQVTAQDPDLGPNGSLKFDIISGNGKGHYKLDPDSGLLVVNQSLD 2624
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G + + + +V+I V + NDN P L PV ++EN
Sbjct: 2625 YEHDSKYILTIRASDGGEFSEKRRVAFTVVFITVLDENDNSPHFLFPVVNCSVLENLPAF 2684
Query: 100 LPIVQLAASDGDLDPDQRISYKI--------SAGNPESY--FNIDIGSGSL 140
+ A D DL P +++Y I +G+PE F ID +G +
Sbjct: 2685 THTCSVHAVDNDLGPYGQVTYSILSSCFLDYDSGSPEKKEAFAIDPLTGDI 2735
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIG---- 55
M VY + E+ ++ L+A D D P+ + Y I GN E F++++
Sbjct: 2443 MFHQEVYSLTVPEDTPTDATLLTLSAEDRDWSPENTHLDYAIIQGNEERRFSLEVRLVQV 2502
Query: 56 ------------------------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
+D P +V + V + NDN P+
Sbjct: 2503 ENQWRNVGKLVLCNPLDRETTESYVLTVSVADRGIPPLNSSAVVMVTVADCNDNAPVFSS 2562
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Y+ Q+ EN + +VQ+ A D DL P+ + + I +GN + ++ +D SG L
Sbjct: 2563 TEYHTQVRENSAVGTHLVQVTAQDPDLGPNGSLKFDIISGNGKGHYKLDPDSGLL 2617
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-----------DI 54
VY A I EN I ++ A+ G D Q + Y I +GN S F+I D
Sbjct: 2035 VYNATIQENSRAGTWITKVEAT-GRADSRQSVVYSIFSGNEHSLFSINHHTGEIRVQKDY 2093
Query: 55 GSDLTGGPDQVYLIVY-------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P ++L+V I + +VNDN P Y + E Q+
Sbjct: 2094 ALDFELSP-HIHLVVLAENGLQTTHCRVSISLLDVNDNAPRFDYSSYRTAVWEGQAHNTY 2152
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I+Q+ ASD D + +I Y I +G+P F +D G L
Sbjct: 2153 IMQVFASDADGGINGQIEYSIVSGDPNQAFILDSVRGILA 2192
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
Y + E Q+ I+Q+ ASD D + +I Y I +G+P F +D
Sbjct: 2139 YRTAVWEGQAHNTYIMQVFASDADGGINGQIEYSIVSGDPNQAFILDSVRGILATNVLLD 2198
Query: 55 ------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+D P V +QV +VNDN+P + P+ I EN+ +
Sbjct: 2199 REITPSYKLVLQAADKGEPPLSSTATVRVQVVDVNDNIP-AIPPMEPVVIAENRPAGHTV 2257
Query: 103 VQLAASDGDLDPDQRISYKISA-GNPESYFNIDIGSG 138
Q+ A+D DL I+Y +SA G+ S F ID +G
Sbjct: 2258 TQVTANDVDL--SSTITYSLSAEGSTRSPFAIDQYTG 2292
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P L + I+V + NDN P+ Y+A + E+ + P+ Q+ A+D DL + RI+Y+
Sbjct: 215 PRTGTLQLNIRVLDENDNPPVFNQTEYHASVPEDAPLMSPVCQVHATDLDLGDNGRITYE 274
Query: 122 ISA--GNPESYFNIDIGSG 138
I+ +P F+I+ SG
Sbjct: 275 INRRQSDPNEVFSINRTSG 293
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ-RISYKISAGNPES 129
+QV + ND+VPM VY + E+ ++ L+A D D P+ + Y I GN E
Sbjct: 2432 VQVLDTNDHVPMFHQEVYSLTVPEDTPTDATLLTLSAEDRDWSPENTHLDYAIIQGNEER 2491
Query: 130 YFNIDI 135
F++++
Sbjct: 2492 RFSLEV 2497
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------- 53
AQ++E+ + + + DGD + +SY I GN + F ++
Sbjct: 1517 AQVMEDAEAGSLLHRFVSKDGDEGGNGLVSYTILTGNTKGVFTLEEKTGLLFLSAPLDYE 1576
Query: 54 ---------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+D P ++V +VND P+ +Y A + EN+ P+V+
Sbjct: 1577 AQRLHHLTIRAADHGLPPLSSTQTFTVEVGDVNDRSPVFSQNIYNASVAENRDPGEPVVR 1636
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++A+D D + + + Y + G F+I+ +G
Sbjct: 1637 VSATDDDSEENAVVWYSLLPGPGYELFSINPHTG 1670
>gi|156371437|ref|XP_001628770.1| predicted protein [Nematostella vectensis]
gi|156215755|gb|EDO36707.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y +I E S IV + A D D+ P+ I+Y I +GN ES F+I+ G+ + G
Sbjct: 270 YTVRISEGTSVGTKIVWVHAHDEDIGPNALITYHIDSGNKESIFDIEDGTIVLNGTLDRE 329
Query: 63 --DQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DQ L IV I ++++NDN P VY I E+ S +
Sbjct: 330 VMDQYTLGILATDNGEPPQLSRDPAIVVITIEDINDNYPEFNASVYSVNISEDTSIGTQV 389
Query: 103 VQLAASDGDLDPDQRISYKISAG---NPESYFNIDIGSGSLG 141
+ + ASD DL + + Y I A + + F+++ +G++
Sbjct: 390 LSVYASDKDLGSNAHVQYFIIASANDDIKRVFDVNKTTGAIS 431
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
+D P + +V +QV++VNDN P+ Y +I E S IV + A D D+ P+
Sbjct: 238 TDHGSSPRVGFAVVSVQVKDVNDNQPIFRPQNYTVRISEGTSVGTKIVWVHAHDEDIGPN 297
Query: 116 QRISYKISAGNPESYFNIDIGS 137
I+Y I +GN ES F+I+ G+
Sbjct: 298 ALITYHIDSGNKESIFDIEDGT 319
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRIS 119
G Q +L + + +Q++ND P+ P Y+ + +S + LP++Q+ A D D + +++
Sbjct: 33 GKFQAFLEIDVHIQDINDQYPV-FSPQNYSVAISEESWVRLPVLQVTAVDMDSGSNSQVT 91
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I GN S F+ID +G +
Sbjct: 92 YSIVDGN--SSFSIDPNTGQI 110
>gi|334349291|ref|XP_001365044.2| PREDICTED: cadherin-23, partial [Monodelphis domestica]
Length = 3103
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY ++E+ +V L +D D+ + +SY I+ GN + F I
Sbjct: 746 VYNVSLLEDIPRDFRVVWLNCTDNDVGLNAELSYFITGGNIDGKFKIGYRDAVVRTVVNL 805
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG +Y+ V +VNDN P+ L Y A + E
Sbjct: 806 DRETTAAYTLIVEAIDNGPVGKRRTGTA-----TIYVTVLDVNDNRPIFLQSSYEASVPE 860
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D + R+ Y+I GN + F I + SG L
Sbjct: 861 DIPEGSSIVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLL 906
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V + V +VNDN+P Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 285 GGGEETTGRVRVNVLDVNDNIPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 344
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 345 YSIVNASLFGSYFDISVYEG 364
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 28/148 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------- 61
+ + A D D+ + ++S+ +++GN F I +D G
Sbjct: 1185 VAVVTARDADIGSNGQVSFYLASGNIGGAFEILTSNDSVGEVFVARPLDREELDHYILKI 1244
Query: 62 --------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
P + I+ I + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1245 VAIDGGSPPRKKDHILRITILDVNDNPPIIESPFGYNVSVNENVGGGTAVVQVIATDRDI 1304
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D +G +
Sbjct: 1305 GINSVLSYYITDGNEDMTFRMDRVTGEI 1332
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGPDQ- 64
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D + +++ P
Sbjct: 1280 YNVSVNENVGGGTAVVQVIATDRDIGINSVLSYYITDGNEDMTFRMDRVTGEISTRPSPP 1339
Query: 65 -------VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+L+ VY+ + + NDN P+ P Y + E + +
Sbjct: 1340 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPQYEILLDEGPDTLNI 1399
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ I+Y I AGN + F ID +G
Sbjct: 1400 SLITIQALDLDEGPNGTIAYAIIAGNIINTFQIDSVTG 1437
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1562 AFYNLTICARDRGIPPLSSTMLVGIRVLDINDNDPVLLNLPMKITISENSPVASFVAHIL 1621
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D P+ +++ I+AGN + F I+ +G
Sbjct: 1622 ASDADSGPNALLTFNITAGNRNNAFFINATTG 1653
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D + R+ Y+I GN + F I + S L
Sbjct: 868 IVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLLVRGPRPLDREQNSSHVLVVEA 927
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND VP+ Y + +GI ++ + A+D D
Sbjct: 928 YNYDLGPMRSSVRVIVYVEDVNDEVPVFTQQQYSRLGLRETAGIGTSVIVVRATDRDTGD 987
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ Y+I +G+ E F ID +G
Sbjct: 988 GGLVIYRILSGS-EGKFEIDESTG 1010
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--- 65
A+++E +P+ + A D D + ++Y++ G P F I+ S + ++
Sbjct: 644 AEVLEGTLAGVPVYHVVAIDLDEGLNGLVTYRMQVGMPRMDFVINSSSGVVTTTTELDRE 703
Query: 66 -----YLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
YL V I+V +VND P VY ++E+ +V
Sbjct: 704 RIAEYYLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSLLEDIPRDFRVVW 763
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L +D D+ + +SY I+ GN + F I
Sbjct: 764 LNCTDNDVGLNAELSYFITGGNIDGKFKI 792
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 32/155 (20%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGG 61
I EN + + ASD D P+ +++ I+AGN + F I+ + D
Sbjct: 1607 ISENSPVASFVAHILASDADSGPNALLTFNITAGNRNNAFFINATTGIITVNRPLDRERI 1666
Query: 62 PD------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
P+ + + ++ I +++ NDN P+ Y A+++EN PI
Sbjct: 1667 PEYKLTISVKDNPENPRIARRDFDLLVISLEDENDNHPLFTQSTYQAEVMENSPAGTPIT 1726
Query: 104 QL----AASDGDLDPDQRISYKISAGNPESYFNID 134
L A D DL + ++YK+ G F+ID
Sbjct: 1727 VLNGPILALDDDLGINAVVTYKL-LGTESGLFDID 1760
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 313 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASLFGSYFDISVYEGYAVISVNR 372
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y +VEN
Sbjct: 373 PLDYEQIPNGMIYLSVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYSVTVVENIM 432
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 433 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 475
>gi|149048782|gb|EDM01323.1| similar to FAT tumor suppressor homolog 4 (predicted) [Rattus
norvegicus]
Length = 1155
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + V +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSVVENAPTGTELLVLGATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + + F +D SG L
Sbjct: 617 TVRFSLQEAESDQRLFRLDPVSGRL 641
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V I V+++NDN P L V VEN I Q A D D + R+ Y + NP
Sbjct: 878 VVNITVKDLNDNAPHFLQAVESIDAVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQ-NP 936
Query: 128 ESYFNIDIGSGSL 140
++ F I+ +G++
Sbjct: 937 KNLFTINEQNGNI 949
>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
YY Q+VEN + P+ Q+ ASD D + ++ + I GN + F ID + + +
Sbjct: 606 YYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLD 665
Query: 66 ------YLIV-------------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y +V ++ V N+NDN P+ +Y A I EN +
Sbjct: 666 YEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDENTTVGH 725
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+++ ASD D + ++ + I GN + F +D +G
Sbjct: 726 VILRVTASDLDSSLNGKVLFSILEGNSDGKFVVDQNTG 763
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + +VNDN P L YY Q+VEN + P+ Q+ ASD D + ++ + I GN +
Sbjct: 587 VRITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSD 646
Query: 129 SYFNIDIGSG 138
F ID +G
Sbjct: 647 GKFVIDQNTG 656
>gi|326670102|ref|XP_001922712.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Danio
rerio]
Length = 3584
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG--- 60
Y I EN PI+QL A+D D + I Y+ SA S F ID S L
Sbjct: 759 YRETIRENVEEGYPILQLRATDLDSTANANIRYRFVGESAAVARSAFEIDPRSGLITTRG 818
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V + NDNVP Y + E+
Sbjct: 819 IVDRETNERYTLLVEASDQGREPGPRSATVSVHITVLDENDNVPQFSQKRYVVAVREDVR 878
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + + Y I +GN F ID +G +
Sbjct: 879 PHSEILRISATDQDKDGNAAVHYNIISGNSRGQFAIDSVTGEI 921
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS----- 56
L P Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1281 LSPRYQGGVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRT 1340
Query: 57 ------------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+LT P + + + + V +VNDN P+ + + EN +
Sbjct: 1341 VRRLDRESVPFYELTAFAVDRGVPPQRTPVHIQVSVMDVNDNAPVFPADDFEVLVKENSA 1400
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D P+ +I Y+I GN F +DI SG L
Sbjct: 1401 VGSVVAQITATDPDEGPNAQIMYQIVEGNIPEIFQMDIFSGEL 1443
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y + E++ +V ++A+D D+ + RI+Y + P+ F ID S
Sbjct: 1182 YSVSVNEDRPPGSTVVVISATDDDVGENARITYYLEDNIPQ--FRIDPASGAITLQAELD 1239
Query: 59 ---------------TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P D Y V + V +VNDN P L P Y + E+
Sbjct: 1240 YEDQMTYTLAITARDNGIPQKSDTTY--VEVNVNDVNDNAPQFLSPRYQGGVSEDAPPFT 1297
Query: 101 PIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++Q++A+D D + R+ Y G + + F I+ SG
Sbjct: 1298 SVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1336
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYL------ 67
I++++A+D D D + + Y I +GN F ID + + L ++ Y
Sbjct: 883 ILRISATDQDKDGNAAVHYNIISGNSRGQFAIDSVTGEIQVVAPLDFETEREYTLRLRAQ 942
Query: 68 ------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
IV +QV +VNDN P+ + + A ++E+ I+ + A D D +
Sbjct: 943 DNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQATVLESAPIGHSILHIQAIDTDNGDN 1002
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
R+ Y+++ ++ F I+ +G
Sbjct: 1003 ARLEYRLTGTGTDTPFVINAATG 1025
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+S ++ + E YF D P V I V +VNDN P L YY ++ E+
Sbjct: 1029 VSSELDRESVEHYFFGVEARDYGSPPLSATASVTITVMDVNDNRPEFLQKEYYVRLNEDA 1088
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ +V + A D D+ + ++Y+I+ GN + F I G+
Sbjct: 1089 AVGTSVVSVTAVDRDV--NSAVTYQITGGNTRNRFAISTAGGA 1129
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 32/152 (21%)
Query: 5 PVYYAQ----IVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--- 56
PV+ A +V+ S + +V Q+ A+D D P+ +I Y+I GN F +DI S
Sbjct: 1384 PVFPADDFEVLVKENSAVGSVVAQITATDPDEGPNAQIMYQIVEGNIPEIFQMDIFSGEL 1443
Query: 57 ----DLTGGPDQVYLIVY--------------IQVQNVNDNVPMTLD-PVYYAQIVENQS 97
DL Y+IV I++ + NDN P D + + V N+S
Sbjct: 1444 TSLIDLDYETRNEYVIVVQATSAPLVSRATVRIRLVDQNDNGPQMQDFQIIFNNFVSNRS 1503
Query: 98 GILP---IVQLAASDGDLDPDQRISYKISAGN 126
P I ++ A D D+ R+ Y I GN
Sbjct: 1504 NTFPSGVIGRVPAHDPDV--SDRLYYTIDRGN 1533
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--GSDLTG 60
L YY ++ E+ + +V + A D D++ ++Y+I+ GN + F I G+ L
Sbjct: 1076 LQKEYYVRLNEDAAVGTSVVSVTAVDRDVN--SAVTYQITGGNTRNRFAISTAGGAGLVS 1133
Query: 61 -------GPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
++ Y++ V+I + + N + P+ Y + E++
Sbjct: 1134 LALPLDYKQERRYVLTVTASDRTLHDTCQVHINITDANTHRPVFQSAHYSVSVNEDRPPG 1193
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D+ + RI+Y + P+ F ID SG++
Sbjct: 1194 STVVVISATDDDVGENARITYYLEDNIPQ--FRIDPASGAI 1232
>gi|301620403|ref|XP_002939565.1| PREDICTED: cadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 2570
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDN+P+ Y I EN+ ++ +V+L A+D D P+ +I+
Sbjct: 57 GGGEETTGRVRINVLDVNDNMPIFQKESYLGAIRENEPSVVTVVKLRATDEDSAPNNQIT 116
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A +SYF I I G
Sbjct: 117 YSILNASAFQSYFEISISEG 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPM 82
+++ +GDL R Y++ N +++NI I + G P +V I+V ++NDN P+
Sbjct: 1270 ISSVEGDLR--VRKDYELDRENI-AFYNITIMAKDRGNPPFSSTAVVEIRVLDINDNDPI 1326
Query: 83 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L+ I EN PI ++ ASD D + +++ I+AGN E+ F+I+ +G
Sbjct: 1327 LLNLPQNISISENTPVSTPITRILASDADTGRNALLTFNITAGNLENAFSINENTG 1382
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ L Y A + EN IVQL A+D D + + Y+I +GN +
Sbjct: 556 VSVTVLDINDNKPIFLKSSYEASVPENVPFSSSIVQLEATDADEGDNGLVWYRILSGNEK 615
Query: 129 SYFNIDIGSG 138
+ F ID+ +G
Sbjct: 616 TNFRIDVNTG 625
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + EN G ++++ A+D D + +SY I+ GN + F +D LTG
Sbjct: 1009 YNVSVYENVGGGTSVIRVNATDKDKGLNSVLSYYITQGNEDLTFRMD---RLTGEIATRP 1065
Query: 62 --PDQ---------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
PD+ VY+ + + NDN P+ PVY V G
Sbjct: 1066 APPDREKQSFYKLVVTVEDEGNPALSATTTVYVTILDENDNSPVFKSPVYE---VTRDEG 1122
Query: 99 ILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L I+ A D D P+ ++Y ISAGN + F+I+ +G
Sbjct: 1123 PLSLNSVILTTTAVDQDEGPNGTVTYSISAGNVQETFSINNATG 1166
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
L Y A + EN IVQL A+D D + + Y+I +GN ++ F ID+ + L
Sbjct: 571 LKSSYEASVPENVPFSSSIVQLEATDADEGDNGLVWYRILSGNEKTNFRIDVNTGLIMRG 630
Query: 60 ----------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V I V++VND VP+ Y +
Sbjct: 631 VQPLDRETNSSHVLVVEAYNSDQGPMRSSVRVIIYVEDVNDEVPVFTQQQYSRLGLRETV 690
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
GI + + A+D D ++YKI +G + F+ID +G L
Sbjct: 691 GIGTSVTVVRATDRDTGDGGLVTYKIISG-ADGKFDIDASTGLL 733
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 34/136 (25%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---------------------------- 68
+++ ++AGNP F I ++ G +V+LI
Sbjct: 930 VTFSLTAGNPSGIFEIRTTNNTLG---EVFLIKSIDREVQELYTLKVQASDSGSPPRRSE 986
Query: 69 --VYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ + V +VNDN P+ P Y + EN G ++++ A+D D + +SY I+ G
Sbjct: 987 YTLTVNVNDVNDNPPVFDKPFGYNVSVYENVGGGTSVIRVNATDKDKGLNSVLSYYITQG 1046
Query: 126 NPESYFNIDIGSGSLG 141
N + F +D +G +
Sbjct: 1047 NEDLTFRMDRLTGEIA 1062
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI 54
Y I EN+ ++ +V+L A+D D P+ +I+Y I +A +SYF I I
Sbjct: 85 YLGAIRENEPSVVTVVKLRATDEDSAPNNQITYSILNASAFQSYFEISI 133
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGGPDQVYLI--------------VYIQVQNVNDNVPM 82
+++ ++AGNP F I ++ G +V+LI V I V + NDN P
Sbjct: 837 VTFSLTAGNPSGIFEIRTTNNTLG---EVFLIKSIDREVQELYTLKVSITVLDENDNSPQ 893
Query: 83 TLDPVY--YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
DP + E+ + + A D D + +++ ++AGNP F I + +L
Sbjct: 894 -FDPTSDSVVNVPEDCPTGRRVALVQARDPDDGNNGLVTFSLTAGNPSGIFEIRTTNNTL 952
Query: 141 G 141
G
Sbjct: 953 G 953
>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
caballus]
Length = 4351
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
V+ Q+ EN ++ + A D D D + Y + AG + F+ID G LT P
Sbjct: 1036 VHQGQVQENSPSGTQVMGVTAHDDDSGLDGELQYSLRAGTGLAAFSIDQDTGVILTLAPL 1095
Query: 63 DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ ++ VYI+V +VNDN P PV+Y + E+
Sbjct: 1096 DREFVSCYWLTVQAVDSGSVPLSSVTEVYIEVMDVNDNSPRMSRPVFYPSVREDAPLYTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I+ GN +F + +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITGGNHMGFFVVHPLTGLL 1194
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
QIVE+ S + Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2310 QIVEDGSDVSKFFQINGSTGEMSTVQELDYEA-----QQHFHVKVRAMDRGDPPLTGETL 2364
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P P Y A + E + ++++ A D D R+ Y I +GN +
Sbjct: 2365 VVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDSRDISRLEYLILSGNQD 2424
Query: 129 SYF 131
+F
Sbjct: 2425 RHF 2427
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ R ++ I+ G+P F I +G +
Sbjct: 2913 YRGSVVENSEPGEPVATLKTLDADVSEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2972
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q ++V I V ++NDN P +Y ++ E+ S I
Sbjct: 2973 TLDREQMAKYLLRITASDGKFQASVLVEIFVLDINDNSPQCSQLLYTGKVSEDVSPGHFI 3032
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3033 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGEL 3069
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMT 83
L A+ +LD ++ SY++ GS++ G V ++VYI + NDN PM
Sbjct: 1711 LIATQKNLDHEKISSYQLKIR----------GSNMAGAFTDVVVLVYII--DENDNAPMF 1758
Query: 84 LDPVYYAQIVEN---QSGIL-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 135
L + QI E S I+ P+V + ASD D + + + YKI +F ID
Sbjct: 1759 LKLTFVGQISEAAPLNSMIVDENNNPVV-IRASDSDKEANSLLVYKILDPEALKFFKIDP 1817
Query: 136 GSGSL 140
G+L
Sbjct: 1818 SMGTL 1822
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ I+ GN +F + + L Q
Sbjct: 1140 PVFYPSVREDAPLYTSVLQLDAWDPDSSSKGKLTFNITGGNHMGFFVVHPLTGLLSTARQ 1199
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ +++ V +++ +VNDN P+ ++ ++ E S
Sbjct: 1200 LDRENKDEHILEVTVQDNGEPSLRSTSRVVVRILDVNDNPPVFSHKLFNVRLPERLSPGT 1259
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + R++Y I + E F+ID +G
Sbjct: 1260 PGPVYRLVASDLDEGLNGRVTYSIEESDDEG-FSIDPVTG 1298
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 734 LARLAATDPDTGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATSFYILNVTVY 793
Query: 59 -TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P Y I E+ I +L A D D + +
Sbjct: 794 DLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQVTISEDTEIGTTIAELKAKDADSEDNG 853
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 854 RVRYTLLS--PTDKFSLHPLTGEL 875
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2785 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTTVIQVTANDQDTGNDGQVSYRLPVDPGS 2844
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2845 NIHELFAIDSETG 2857
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D ++SY++ N F ID +
Sbjct: 2802 DP-YKAVLTENMPVGTTVIQVTANDQDTGNDGQVSYRLPVDPGSNIHELFAIDSETGWIT 2860
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y ++V + + + NDN P Y +VEN
Sbjct: 2861 TLQELDCETRQTYRFYVVAYDHGRTIQLSSQVLVEVSITDENDNAPQFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
P+ L D D+ R ++ I+ G+P F I
Sbjct: 2921 SEPGEPVATLKTLDADVSEQNRQVTCYITEGDPLGQFGI 2959
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 29 GDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQV------------YLIVYIQVQ 74
G LDP +++ S+G + +D+GS L+ V ++ V I V+
Sbjct: 1487 GSLDPRSASLFQLDPSSGVLVTVGKLDLGSGLSWHTLTVMVRDQEMPIKRNFVWVSIHVE 1546
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ N + P Y + + + ++Q+ A DGD + + Y + GN E +FNID
Sbjct: 1547 DGNLHPPRFTQLHYETNVTDTTAPGTELLQVRAMDGDRGDNAEVHYSLLKGNSEGFFNID 1606
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLRLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D + + V + V+++NDN P VY I E P
Sbjct: 2231 LDYESKTKHTFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQSVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL A D D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLAFDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
>gi|260830788|ref|XP_002610342.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
gi|229295707|gb|EEN66352.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
Length = 3154
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 33/165 (20%)
Query: 6 VYYAQIVEN-QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGS------- 56
VY +++E+ Q G L + Q+ A+D D P ++++ Y I +GN + F ID S
Sbjct: 2269 VYRVEVMEDIQPGAL-VGQVEATDADALPQNKKVLYHILSGNVYNTFRIDTESGEVFTQA 2327
Query: 57 ----------DLT-------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
LT G Q+ ++I + +VND P+ + Y I+
Sbjct: 2328 AVDRETLSLYQLTIQATNPSGDSQSVNGTTQITAQMFITIADVNDIAPVFDEEEYARPIL 2387
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
EN+ I+ + A DGDL + R+SY I+ GN ++ F I+ SG
Sbjct: 2388 ENEPIGTSILYVHAEDGDLGNNSRLSYSIAEGNVDNAFKINEKSG 2432
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGPD-- 63
Y + EN G + Q+ A D D + +SY I +GN +S F +D + D+T P+
Sbjct: 1132 YNVSVQENVGGGTTVTQVQAVDIDAGDNAFLSYYIISGNEDSMFRMDRLSGDITTRPNSP 1191
Query: 64 ----------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ-SGIL 100
Q Y VYI + + NDN P+ P Y + E + S +
Sbjct: 1192 DRETKDFYNMTVLVEDEGSPQLQAYTTVYISILDENDNAPVFEFPTYSYTLREGEGSAGI 1251
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV + A+D D + ++ + I++GN + F+I+ +G +
Sbjct: 1252 YIVDINATDIDQGLNGKVVFNIASGNDGNEFDIEPDTGKI 1291
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLTG 60
Y + E+ S ++++ ASD D+ + I + + S F I+ D
Sbjct: 615 YNVSVREDISAGDTVLRVFASDADMSEELGQDSVIYSMSGSSRFRINPRDGEIKAVDGGQ 674
Query: 61 GPDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G DQ V+ I V +VNDN P+ + P Y+ I+EN + + +VQ+ A+D D + I
Sbjct: 675 GLDQRTATVFVNITVLDVNDNSPVFVQPEYHTNILENITDMEIVVQVNATDEDSTTNGDI 734
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y I+ GN + F I+ SG
Sbjct: 735 LYAITGGNTDDAFIINPQSG 754
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDP 86
DGDL Q + +++NI + + G P + ++ V I+V ++NDN P+ D
Sbjct: 1397 DGDLKVKQGLELDRER---TAFYNITLRAQDRGRPPLKGFMTVSIEVLDINDNDPIFQDL 1453
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
YY ++ EN + +++A+D D + I+Y I++GN F I+ +G +
Sbjct: 1454 PYYCRVSENAPVDTLVFKVSANDTDEGNNAFITYSITSGNIGQVFRINGTNGEI 1507
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 5 PVYYAQIVEN-QSGILPIVQ--LAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
P+Y +I EN Q+G + + A D D + + Y I G +F ID
Sbjct: 1561 PLYRGRISENSQAGTAVDMSEDILAVDADATTNAEVHYSI-FGKDARFFRIDSVKGELFV 1619
Query: 54 ----------IGSDLT--------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
IG+DL+ GG ++ VY+++ + NDN P+ + ++ A + EN
Sbjct: 1620 RDGSLLDRETIGNDLSFTVMAADPGGLNE-SAGVYLEILDQNDNSPIFISTLFRANVSEN 1678
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ ++ ASD D +Q I+Y+I +G + +
Sbjct: 1679 AFPGTSVTRIEASDQDDGLNQLITYRIESGGQDKF 1713
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y + E++ G I+ L A D D ++Y I+AGN F ++ + L
Sbjct: 2169 YSLAVREDEYGGTSILGLVALDDD--EGNVLTYSITAGNEHRDFAVGASTGHVIVAKSLD 2226
Query: 60 GGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIV 103
Y + + +++ +VNDN P+ VY +++E+ Q G L +
Sbjct: 2227 HETRPAYTLTVTAFDQDGRNGSTTLLVKILDVNDNPPVFSQDVYRVEVMEDIQPGAL-VG 2285
Query: 104 QLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D P ++++ Y I +GN + F ID SG +
Sbjct: 2286 QVEATDADALPQNKKVLYHILSGNVYNTFRIDTESGEV 2323
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Q V I + ++NDN P+ Y + EN++ PI+++ A+D D P + Y
Sbjct: 480 PQQTAARVRIDIVDLNDNRPIFQRDDYVGTVRENEASQTPILRVRATDEDSPPYNILVYN 539
Query: 122 ISAGNPESYFNIDIGSG 138
I++G+ F I G
Sbjct: 540 ITSGDSLHNFTISTEDG 556
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 30/150 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
I ++ A D D + R+ Y I GN YF I+ G
Sbjct: 1035 IARVIARDPDDADNGRVEYTIEEGNDLEYFKIEKTESGDGIIRNLHPLDREEQEEYKLRV 1094
Query: 61 -----GPDQVY--LIVYIQVQNVNDNVPMTL---DPVYYAQIVENQSGILPIVQLAASDG 110
G Q+ + V + ++++NDNVP + Y + EN G + Q+ A D
Sbjct: 1095 VACDQGSPQLCNNVTVVVTLEDINDNVPAFIFNSSYRYNVSVQENVGGGTTVTQVQAVDI 1154
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D + +SY I +GN +S F +D SG +
Sbjct: 1155 DAGDNAFLSYYIISGNEDSMFRMDRLSGDI 1184
>gi|395526460|ref|XP_003765381.1| PREDICTED: protocadherin-16 [Sarcophilus harrisii]
Length = 3095
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++V I VQ+VNDN P+ P Y + E+ ++++AASD D P + +
Sbjct: 2369 PRSTSVLVVITVQDVNDNPPVFAQPHYRVAVPEDTPVGTELLRVAASDADPGPHGLVYFT 2428
Query: 122 ISAGNPESYFNIDIGSGSL 140
IS+G+P F +D SG+L
Sbjct: 2429 ISSGDPAHLFELDESSGAL 2447
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 35/161 (21%)
Query: 12 VENQSGILPIVQLAAS--------DGDLDPDQRISYKISAGNPESYFNID---------- 53
V + S +LP Q A S D DL R+SY+++ GN + +F++
Sbjct: 1336 VSSPSSLLPEDQPAGSVALYVVARDPDLGEAARLSYQLAGGNSDGHFHLHPSTGALSITR 1395
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +D P ++ + V +VND P Y+ + EN+
Sbjct: 1396 PLDREQRAEHLLTVVAADHGSPPRSATQLLTVSVVDVNDEAPTFPQAAYHVHVPENRPPG 1455
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D DL + +++Y +G+ F++D +G L
Sbjct: 1456 TTVLTLHATDPDLGVNGQVTYGGVSGDT---FSLDPNTGVL 1493
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 24/129 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGPDQVYL----------- 67
+ ++ A D D P+ ++Y I G +F ID + + T P L
Sbjct: 278 VARVTARDPDQGPNGNVAYSIVPGTHAHWFAIDASTGVITTAAPLDYELEPRPQLTVLAT 337
Query: 68 -----------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+V++ +Q+VNDN P+ Y A + E + +Q+ A+D D P
Sbjct: 338 DGGQPALSSTAVVHVVLQDVNDNEPVFKRTFYNASLPEGTAPGTCFLQVTATDADSGPFG 397
Query: 117 RISYKISAG 125
+SY + AG
Sbjct: 398 LLSYSLGAG 406
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV------------------ 65
L ASD D+ P+ +I+Y+I G+ F +D S G +
Sbjct: 1562 LRASDPDIGPNGQINYQILNGDVSGAFILDAVSGTLGTARSLDREAEPSFQLLVAARDGG 1621
Query: 66 ------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
++V + V + ND+ P P Y ++ E+ ++QL A D D + R++
Sbjct: 1622 QPALSATMLVTVAVLDANDHAPTFTAPSYTVEVPEDAPPGTLLLQLEAHDPDAGANGRVA 1681
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + G ++ ++ GSG L
Sbjct: 1682 YYLGEGAGGAFL-LEPGSGEL 1701
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ + EN+ ++ L A+D DL + +++Y +G+
Sbjct: 1444 YHVHVPENRPPGTTVLTLHATDPDLGVNGQVTYGGVSGDTFSLDPNTGVLTTRQVLDREE 1503
Query: 47 ESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ N+ + + G P + ++ V++ V++ ND+ P ++ E Q V L
Sbjct: 1504 QQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTV-L 1562
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
ASD D+ P+ +I+Y+I G+ F +D SG+LG
Sbjct: 1563 RASDPDIGPNGQINYQILNGDVSGAFILDAVSGTLG 1598
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGS------- 56
Y A + E + +Q+ A+D D P +SY + AG + F ID +
Sbjct: 369 YNASLPEGTAPGTCFLQVTATDADSGPFGLLSYSLGAGLSSTGPPPFQIDPHTGEVCTSR 428
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P +Y A +
Sbjct: 429 SLDRDQGPPSFDFTVTAVDGGGLKSLVYVKVFVSDENDNRPEFYPRIYAASVSTQSPPGT 488
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I++++A D D P ++Y+I AGN F +D SG
Sbjct: 489 AILRVSAHDPDQGPHGTLTYRILAGNSPPLFALDKDSG 526
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
IQV++VNDNVP +Y + E+ + I+ ++A+D D + R+SY + +
Sbjct: 2157 IQVEDVNDNVPTFSQSLYQVTLAEHTTPGSAILTISATDLDSGDNGRVSYHLVSS--AEG 2214
Query: 131 FNIDIGSGSL 140
F+ID +G+L
Sbjct: 2215 FDIDPSNGTL 2224
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ ++ + +Q+ NDN P L P Y A + E++ P++++ A D D P +++Y ++
Sbjct: 1947 FTVLTLSLQDANDNAPRFLKPHYAAFVPESRPLSGPLLKVEADDLDQGPGGQVTYSLAPS 2006
Query: 126 NP-ESYFNIDIGSGSL 140
+ F+ID G++
Sbjct: 2007 HATRGLFHIDPAMGTI 2022
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------NPE--SYFNIDIGSD 57
+Y + E+ + I+ ++A+D D + R+SY + + +P + F I S
Sbjct: 2173 LYQVTLAEHTTPGSAILTISATDLDSGDNGRVSYHLVSSAEGFDIDPSNGTLFMIQAASQ 2232
Query: 58 LTGGPDQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG V ++ V+IQ+Q+ ND P + P Y+ + E+
Sbjct: 2233 SLGGLGTVDMVLEARDHGVPRRTAQATVHIQLQDENDYTPSFVQPYYHITVAEDLPPGST 2292
Query: 102 IVQLAASDGDLD-PDQRISYKISAGNPESYFNID 134
++ L A+D D P + Y I +GN F ++
Sbjct: 2293 VLILEATDADQSRPHATLDYAIISGNRGQAFQLE 2326
>gi|321466721|gb|EFX77715.1| hypothetical protein DAPPUDRAFT_321186 [Daphnia pulex]
Length = 1805
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 30/163 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----GGP 62
Y ++I E+ + ++ ++A+DGD I+Y ++ N + YF ID +T GG
Sbjct: 999 YESRIPEHSAAGTAVLTVSATDGDAGSFGLITYSLTGENAK-YFTIDASGTITVTDPGGL 1057
Query: 63 DQ-----------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN--QS 97
D+ + V IQ++++NDN P LD Y A + E
Sbjct: 1058 DRERSPSLTLLVAASDLAPPGARRTTIMPVEIQLEDINDNQPKFLDNTYRATVAETVPLL 1117
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
PIVQ+ A D D + + Y I GN + F +D +G L
Sbjct: 1118 PPPPIVQITAIDHDSGMNSALRYTIIEGNEDGLFTLDSATGIL 1160
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
Y+ ++ E P QL + G+L R K+ +S F + + + GGP
Sbjct: 1248 TYHIRVGEQLVKETPEFQLDPNSGEL----RTRLKLDR-EAQSSFELLLVAKDQGGPTTS 1302
Query: 66 Y---LIVYIQVQNVNDNVPMTLDPV--------YYAQIVENQSGILPIVQLAASDGDLDP 114
Y ++ + V++ NDN P PV Y+ +I EN + Q+ A D D P
Sbjct: 1303 YETLRLLTVMVEDENDNQPEF--PVERRSKVAPYHFRIEENVRPDTAVGQVQAFDADTGP 1360
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +I Y I AGN ++F ID G
Sbjct: 1361 NAKIYYHILAGNEGNWFYIDRTHG 1384
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVND 78
P + G + QR+ Y+ S PE +N+ + + G P + V + + N+ND
Sbjct: 935 PFFSIDGRSGVVTNKQRLDYEAS---PE--YNLTVVAHDAGIPSLSSMAQVKVTLININD 989
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P Y ++I E+ + ++ ++A+DGD I+Y ++ N + YF ID SG
Sbjct: 990 LSPAFTSKSYESRIPEHSAAGTAVLTVSATDGDAGSFGLITYSLTGENAK-YFTID-ASG 1047
Query: 139 SL 140
++
Sbjct: 1048 TI 1049
>gi|167536805|ref|XP_001750073.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771402|gb|EDQ85069.1| predicted protein [Monosiga brevicollis MX1]
Length = 10110
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y + E+ + + Q++A++ D+ D I Y I AGN F ID + D
Sbjct: 5536 YTGSVAEDAAINTTVTQVSATNPDVSADP-IKYSIRAGNAAGRFAIDATTGEIRVAQVLD 5594
Query: 58 LTGGPDQVYLI------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
P V + V I V +VNDN P+ + P Y I E+ P++Q+
Sbjct: 5595 RETTPGYVLTVRADDSVQLAQTSVTITVTDVNDNSPVFVRPTYSTAIAESAPENSPVLQV 5654
Query: 106 AASDGDLDPDQRISYKIS 123
+A+D D+ + R+SY+++
Sbjct: 5655 SATDADVGLNARLSYELA 5672
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 27/154 (17%)
Query: 13 ENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYF---------------NIDIG 55
EN + I+QL A+D D P+ +I+Y + GN E+ F N ++
Sbjct: 5435 ENAAVGTLILQLNATDADEPGQPNSQIAYALIDGNTENLFALDTTTGALTVAISPNAEVH 5494
Query: 56 SDLT-------GGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
SD + GP L + I++ Q++NDN P Y + E+ + + Q++
Sbjct: 5495 SDASLLIQVRDMGPGTFVLNITIEILLQDLNDNPPEFDSASYTGSVAEDAAINTTVTQVS 5554
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A++ D+ D I Y I AGN F ID +G +
Sbjct: 5555 ATNPDVSADP-IKYSIRAGNAAGRFAIDATTGEI 5587
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPES-YFNID--IGSDLTGGPDQVYLI--------- 68
+ + A+DGD + + ++Y I+AG+ E YF ID GS + L+
Sbjct: 5028 VFSIVATDGDCE--ETLTYTIAAGDYEPPYFAIDNVTGSIIVARTLDYELVTRYVLQVHV 5085
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ I V++VNDN P+ Y A E QS ++ LAASD D
Sbjct: 5086 SDGEYTDSSSLVITVEDVNDNAPVFSRTTYTATFAETQSVGTTLLTLAASDRDSGIRGMF 5145
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
+ + +GN + F+++ +G L
Sbjct: 5146 DFALISGNGDGRFDLNATTGEL 5167
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
++ G LD + + +Y++ + + S + + L VY+ V + NDN P+
Sbjct: 5377 STTGPLDREAQAAYRL----------VVVASSIMPPLQEATLDVYVTVLDKNDNHPVLQS 5426
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSGSL 140
Y + EN + I+QL A+D D P+ +I+Y + GN E+ F +D +G+L
Sbjct: 5427 TEYSIVLPENAAVGTLILQLNATDADEPGQPNSQIAYALIDGNTENLFALDTTTGAL 5483
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKI-SAGNPESYFNIDI--------- 54
Y ++E+ + P+++++A+DGDL + ++ Y++ +A ++ F +D
Sbjct: 750 YQTSVLESVNVTQPLLRVSATDGDLPATANGQVRYELYNALFSDTNFTVDAITGQIYATR 809
Query: 55 ---------------GSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
DL G P + + V I V NVNDN P+ +D Y A I E S
Sbjct: 810 ALDYETVQRYFFTVQAHDL-GSPRRSSPVINVTILVINVNDNAPLFVDAPYSANISEATS 868
Query: 98 GILPIVQLAASDGDLDPDQRISYKI 122
++ +AA+D DL +Q +S+ I
Sbjct: 869 IGTAVLAVAATDADL--EQTLSFSI 891
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A E QS ++ LAASD D + + +GN + F+++
Sbjct: 5115 YTATFAETQSVGTTLLTLAASDRDSGIRGMFDFALISGNGDGRFDLNATTGELSLLLPLD 5174
Query: 54 --------IGSDLT--GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+G +T G P V I V +VNDN P + + EN P+
Sbjct: 5175 RENASSYTLGVAVTDRGTPALNSTARVIITVTDVNDNAPQFTAETFSVYLAENAQAGDPV 5234
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ A+D D+ + +S+ + A + FN+
Sbjct: 5235 FTVTATDADVGVNAALSFTLLASGDAARFNM 5265
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 23/141 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL----------DPDQRISYKISAGN----------- 45
Y + E+ + P++ L+A+DGDL + S+ I+A
Sbjct: 545 YTVAVAEDVNVANPLLTLSATDGDLPTTANGQIRYSLNGTASFAINATTGVIHALAPLDY 604
Query: 46 --PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ Y +DL P V I VQNVNDNVP+ Y + E+ I+
Sbjct: 605 EQTQKYVFTATAADLGTPPRFATTTVTINVQNVNDNVPVFGAASYAVNVSESTLKNTVIL 664
Query: 104 QLAASDGDLDPDQRISYKISA 124
++A+D D+ R S + ++
Sbjct: 665 LVSATDADILDSVRFSIQTAS 685
>gi|449473946|ref|XP_004176368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Taeniopygia guttata]
Length = 3621
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS----- 56
+ P Y I E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 475 VSPHYQGMISEDAPPFTSVLQISATDRDAHTNGRVQYTFQNGEDGDGDFTIEPTSGIIRT 534
Query: 57 ------------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+LT P + + + + +Q+VNDN P+ + ++ EN
Sbjct: 535 VRRLDRENVPVYELTAYAVDRGIPPQRTPVHIQVTIQDVNDNAPVFPAEEFEVRVKENSI 594
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ +I Y+I GN F +DI SG L
Sbjct: 595 VGSVVAQITAVDPDEGPNAQIMYQIVEGNIPEIFQMDIFSGEL 637
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + VYI V + NDN+P + Y Q+ E+ I+++ A+D D D + + Y
Sbjct: 36 GPRSDTVNVYITVLDENDNIPQFSEKRYIVQVREDIRPHTEILRVTATDLDKDNNALVHY 95
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN F+ID +G +
Sbjct: 96 NIISGNSRGQFSIDSVTGEI 115
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I E++ +V ++A+D D+ + RI+Y + P+ + D G+
Sbjct: 376 YSVSINEDRPVGSTVVVISATDDDVGENARITYYLEDNVPQFRIDPDSGAITLQAELDYE 435
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V I V +VNDN P + P Y I E+ ++Q
Sbjct: 436 DQVTYTLAITAKDNGIPQKADTTYVEIMVNDVNDNAPQFVSPHYQGMISEDAPPFTSVLQ 495
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 496 ISATDRDAHTNGRVQYTFQNGEDGDGDFTIEPTSG 530
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ I+++ A+D D D + + Y I +GN F+ID
Sbjct: 63 YIVQVREDIRPHTEILRVTATDLDKDNNALVHYNIISGNSRGQFSIDSVTGEIQVVAPLD 122
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P + IQV ++ND+ P+ + + ++EN
Sbjct: 123 FEVEREYALRIRAQDAGRPPLSNNTGMASIQVVDINDHAPIFVSTPFQISVLENAPLGHS 182
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ YK++ + ++ F ++ +G
Sbjct: 183 VIHIQAVDADYGENSRLEYKLTGVSADTPFVVNSATG 219
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGSD 57
Y+ ++ E+ + ++ + A D D++ I+Y+I+ GN + F+I +
Sbjct: 274 YFIRLNEDAAVGTSVLSVTAVDRDVN--SAITYQITGGNTRNRFSISTQGGLGLITLSLP 331
Query: 58 LTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
L ++ Y++ V+I + + N + P+ Y I E++ +V
Sbjct: 332 LDYKQERRYVLTVTASDRTLRDNCHVHINITDANTHRPVFQSAHYSVSINEDRPVGSTVV 391
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A+D D+ + RI+Y + P+ F ID SG++
Sbjct: 392 VISATDDDVGENARITYYLEDNVPQ--FRIDPDSGAI 426
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ +I Y+I GN F +DI S DL Y+I
Sbjct: 599 VAQITAVDPDEGPNAQIMYQIVEGNIPEIFQMDIFSGELTALIDLDYETKSEYVIVVQAT 658
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ + NDN P+ + + + V N+S P I ++ A D D
Sbjct: 659 SAPLVSRATVHIKLIDQNDNSPVLKNFQILFNNYVSNKSNTFPSGVIGKVPAYDP--DAS 716
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 717 DHLFYTFERGNELHLLIVNQSSGEL 741
>gi|345319681|ref|XP_003430184.1| PREDICTED: cadherin-23 [Ornithorhynchus anatinus]
Length = 2471
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y + E+ + +L +D D+ + +SY I+ GN + F++
Sbjct: 431 IYNVSLPEDVPRDFRVARLNCTDNDVGLNAELSYFITGGNQDGKFSVGYRDGVVRTVVSL 490
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I + +G VY+ V +VNDN P+ L Y A + E+
Sbjct: 491 DRETTATYTLILEAIDNGPSGKRRTGTATVYVTVLDVNDNRPIFLQSSYEASVPEDIPEA 550
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I +GN S F I + +G L
Sbjct: 551 SSIVQLKATDADEGEYGRVWYRIISGNSHSQFRIHLSNGLL 591
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V + V +VNDNVP Y + EN+ I +V+L A+D D P+ +I+
Sbjct: 146 GGGEETTGRVRVNVLDVNDNVPTFQKDSYLGALRENEPSITQLVRLRATDEDSPPNNQIA 205
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYFNI++ G
Sbjct: 206 YSIVNASAFGSYFNINVYEG 225
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLD 113
SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ ASD D+
Sbjct: 835 ASDCGSPPRRKDHILRVTILDVNDNPPVIESPFGYNVTVNENVGGGTAVVQVRASDRDIG 894
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F ID +G +
Sbjct: 895 LNSLLSYYITRGNEDMTFRIDRVTGEIA 922
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + EN G +VQ+ ASD D+ + +SY I+ GN + F ID +TG
Sbjct: 869 YNVTVNENVGGGTAVVQVRASDRDIGLNSLLSYYITRGNEDMTFRID---RVTGEIATRP 925
Query: 62 --PDQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
PD+ +L+ VY+ V + NDN P+ Y + E
Sbjct: 926 SPPDRERQSFYHLVVTVEDEGTPALSATTPVYVTVLDENDNAPVFQQQHYEVSLDEGPDT 985
Query: 99 I-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ + A D D P+ + Y I GN + F+ID +G
Sbjct: 986 LNASLITVRALDWDEGPNGSVIYAIIQGNIINTFHIDSATG 1026
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V ++V ++NDN P+ L+ I EN + +
Sbjct: 1106 AFYNLTICARDRGTPALSSTILVGVRVLDINDNDPVLLNLPLNVSISENSPVSSFVAHIH 1165
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ ++AGN + F I+ +G
Sbjct: 1166 ASDADSGRNALLTFNLTAGNRDRAFLINATTG 1197
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++I + + NDN P+ +++EN I+Q+ ASD D P+ ++SY+I +G +
Sbjct: 1346 LHISILDDNDNQPIFSPAALTVRLLENSPPGFSILQVTASDKDSGPNGQLSYRIESGAQD 1405
Query: 129 SYF 131
+
Sbjct: 1406 RFL 1408
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 24/137 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ Q+ A D D + ++Y++ G P F+I+ S L
Sbjct: 341 VFQVVAVDLDEGLNGLVTYRMQVGMPRMDFSINSSSGLVLSAVVLDRERIAEYFLRVVAS 400
Query: 59 -TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++V +VND P +Y + E+ + +L +D D+ +
Sbjct: 401 DAGTPSKTSTSTLTVRVLDVNDETPTFFPAIYNVSLPEDVPRDFRVARLNCTDNDVGLNA 460
Query: 117 RISYKISAGNPESYFNI 133
+SY I+ GN + F++
Sbjct: 461 ELSYFITGGNQDGKFSV 477
>gi|291225882|ref|XP_002732927.1| PREDICTED: fat-like, partial [Saccoglossus kowalevskii]
Length = 4229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNID---------I 54
VYY + EN I+Q+ A D D+ + I Y I ++ + + F+ID
Sbjct: 325 VYYGNVTENTFSNATILQVLADDLDIGANADIIYSILATSSHGDDRFSIDGDSGDISVQS 384
Query: 55 GSDLTGGPDQVYLI--------------------VYIQVQNVNDNVPMTLDPVYYAQIVE 94
+DL Y+I VYI + ++ND +P D Y A + E
Sbjct: 385 NADLDYELVSSYVITVQAVDNPTMDTQQRSSVVTVYIDIIDINDVMPEFADSSYVAYVNE 444
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Q+ A+D DL P+ + Y IS+GN ++F+ID +G L
Sbjct: 445 AVAMDTSVIQIQATDADLSPNDDVMYYISSGNHGNHFDIDNSTGGL 490
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 35/162 (21%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D Y A + E + ++Q+ A+D DL P+ + Y IS+GN ++F+ID + TGG
Sbjct: 435 DSSYVAYVNEAVAMDTSVIQIQATDADLSPNDDVMYYISSGNHGNHFDID---NSTGGLS 491
Query: 64 QVYLI-------------------------------VYIQVQNVNDNVPMTLDPVYYAQI 92
+ I V + +Q++N+N P+ + Y I
Sbjct: 492 VISAIDVETEQSQFIIEITVYNTEPYVGNQLNNTVNVTVNIQDINNNGPLFENTTYAISI 551
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
E+ PI++L A+D D I Y IS GN + F+I+
Sbjct: 552 PEDTELRSPILRLTATDVDTITSYFI-YWISNGNNDGIFDIN 592
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
+ N+S I+ +L LD + Y ++ + F+ + V L VYI
Sbjct: 1554 IHNESAIVSTTEL------LDRESHDKYVVTISVTDGKFS-----------NNVNLTVYI 1596
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
+ + NDN P +Y I E +G + + A+D DL P+ + Y IS+GN ++F
Sbjct: 1597 E--DTNDNSPQFDISLYIFNISEGING-TNVGTVHATDADLSPNDDVMYYISSGNHGNHF 1653
Query: 132 NIDIGSGSL 140
+ID +G L
Sbjct: 1654 DIDNSTGGL 1662
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 36/143 (25%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----------PDQVYLIVYIQV 73
+ A+D DL P+ + Y IS+GN ++F+ID + TGG +Q I+ I V
Sbjct: 1627 VHATDADLSPNDDVMYYISSGNHGNHFDID---NSTGGLSVISAIDVETEQSLFIIEITV 1683
Query: 74 ----------------------QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
Q++N+N P+ + Y I E+ PI+++ A+D D
Sbjct: 1684 YNTEPYVGNQVMNNTVNVTVNIQDINNNGPLFKNTTYTISIPEDIELRSPILRVTATDMD 1743
Query: 112 LDPDQRISYKISAGNPESYFNID 134
I Y IS GN + F+I+
Sbjct: 1744 TITSYFI-YWISNGNNDGIFDIN 1765
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPE 128
I + + NDN P+ + YY + E+ + I+Q+ ASD DL + + Y I ++GN +
Sbjct: 1385 IAILDENDNSPIFMKSTYYGNVTEDVDIGMEILQVEASDVDLGGNADVDYSILAASGNGD 1444
Query: 129 SYFNIDIGSGSL 140
S F I +GS+
Sbjct: 1445 SIFGIHGNNGSI 1456
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAG 125
++V + VQ++NDN P+ + Y A + E+ S I+ ++ +D D + I++ + S G
Sbjct: 2586 IVVTVYVQDINDNPPVFTEDTYTADVPEDASADRSIITVSVTDNDW--NNTITFSLQSDG 2643
Query: 126 NPESYFNIDIGSG 138
N F ID SG
Sbjct: 2644 NTNGAFTIDEMSG 2656
>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
garnettii]
Length = 2919
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD + I Y++ G+P F ID
Sbjct: 284 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPLNANILYRLLEGIGGSPSEVFEIDPR 343
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 344 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYV 403
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 404 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 454
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 402 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 461
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 462 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 521
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 522 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 558
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 863 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 906
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 907 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 966
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 967 FQLDIFSGEL 976
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 715 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 774
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 775 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 834
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 835 ISATDRDSGLNGRVFY 850
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 594 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 651
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 652 NRFSITSQSG 661
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 22/157 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------ 46
P Y A ++EN P++Q+ A+D DL + ++SY +G P
Sbjct: 1461 PEYEAHVMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRALDR 1520
Query: 47 ---ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
E + D P V++ V + ND+ P + ++ ENQS + +
Sbjct: 1521 EEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLESESFSVEVPENQSRVA-LY 1579
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D + R+ Y+++ G+P F++D SG L
Sbjct: 1580 TLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVL 1616
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P + + V I VQ+VNDN P+ Y A + E ++++AA
Sbjct: 2346 YNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEYRAVVSEAALPGTELLRVAAH 2405
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P R+ Y IS+G+ F + +G+L
Sbjct: 2406 DADSGPRGRVHYTISSGDQHGLFQLHESTGAL 2437
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ + V + NDNVP+ L P + ++E+Q + + A D DL + R+SY + AGN
Sbjct: 1308 VTARVFVTDENDNVPVFLSPATVS-VMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGN 1366
Query: 127 PESYFNIDIGSG 138
+ F+++ +G
Sbjct: 1367 ADGRFHLNPSTG 1378
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
++ + V +VND P+ P Y A ++EN P++Q+ A+D DL + ++SY +G P
Sbjct: 1443 LLSVLVLDVNDEAPVFEKPEYEAHVMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGP 1502
Query: 128 ES 129
S
Sbjct: 1503 FS 1504
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ ++ ENQS + + L A+D D + R+ Y+++ G+P F++D
Sbjct: 1565 FSVEVPENQSRVA-LYTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHALD 1623
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ D P + V +QV ++NDN P Y ++ E+ +
Sbjct: 1624 REQIASYSLIVVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALV 1683
Query: 103 VQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
+QL A D D + ++SY + GN F ++ SG +
Sbjct: 1684 LQLVAEDPDEGTNGQVSYYL--GNESLGMFQVEPQSGCI 1720
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R SY + E+Y D GS P + + + +Q++NDN P Y+
Sbjct: 33 LDRENRSSYSLLL---EAY---DGGSP----PRSTQMTLDVSIQDINDNAPSFNQSRYHT 82
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
I EN I+Q+ ASD D + + Y+I+ +P+ YF ID +G
Sbjct: 83 LISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTG 132
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 36 RISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
I+Y I +GN + F I S D P Q+ L++ Q+VNDN+P Y
Sbjct: 1905 HITYSIVSGNERNTFLIQPSSVQDSSSLDFEASP-QLRLVI----QDVNDNLPRFQLQNY 1959
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSGSL 140
A I E+QS P++Q+ A D D + +++Y I+ P ++ID +G++
Sbjct: 1960 VAFIWESQSYDSPVIQVLADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTI 2012
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISA 124
+ V +QV +VND+ P+ +P Y A + E+ ++ L A D DL + Y I +
Sbjct: 2247 WATVQLQVLDVNDHSPLFQEPCYNASVPEDLRPGTTVLMLEAGDADLSRENAGFDYTIVS 2306
Query: 125 GNPESYFNID 134
GN + F ++
Sbjct: 2307 GNGGNAFQVE 2316
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + + NDN P + Y+ + ENQ+ + ++ ASD D + R++Y++ +P
Sbjct: 913 VRISITDENDNSPRLSEERYFFTVSENQAPGSTVGRVTASDRDAGQNSRLTYRLLQHDPN 972
Query: 129 SYFNIDIG 136
+ G
Sbjct: 973 FLIHTQTG 980
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 5 PVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFN-------IDI 54
P+ YA + QS +P ++++ A D D + R++Y+I GN F+ I +
Sbjct: 508 PLEYAASISTQS--MPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSLNKDTGVISL 565
Query: 55 GSDLTGGPDQVYLIVY-------IQVQ-NVNDNV---------PMTLDPVYYAQIVEN-- 95
L+G + + +V +Q Q N N+ P+ Y+ + E+
Sbjct: 566 SWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQYFFSVPEDMP 625
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q + VQ G D I Y IS+G+P YF+ID SG L
Sbjct: 626 QGASVGSVQAQNPPGHAD---DIFYSISSGDPHGYFSIDSASGQL 667
>gi|24584881|ref|NP_724075.1| Cadherin-N, isoform E [Drosophila melanogaster]
gi|22946729|gb|AAN10998.1| Cadherin-N, isoform E [Drosophila melanogaster]
Length = 3097
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|194758880|ref|XP_001961686.1| GF15089 [Drosophila ananassae]
gi|190615383|gb|EDV30907.1| GF15089 [Drosophila ananassae]
Length = 3097
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
Length = 3222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y+AQ+ EN L +VQ++A D DL + I+Y I +GN + +D
Sbjct: 2523 PEYHAQVSENSPVGLVLVQVSAYDPDLGANGTITYNIISGNSKGLITVDSSTGVIKVNGT 2582
Query: 55 --------------GSDLTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
SD D+ + +VYI V + NDN P + P Y + EN
Sbjct: 2583 LDYEEDTKLTLTVQASDWGTSDDKKVSFAVVYILVLDENDNSPFFMFPTYNCSVSENLPA 2642
Query: 99 ILPIVQLAASDGDLDPDQRISYKI 122
P+ + A D D +SY I
Sbjct: 2643 FTPVCTVHAVDEDAGTFGLLSYSI 2666
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V ++V ++NDN P P Y+AQ+ EN L +VQ++A D DL + I+Y I +GN
Sbjct: 2505 VVSVKVLDINDNAPAFSSPEYHAQVSENSPVGLVLVQVSAYDPDLGANGTITYNIISGNS 2564
Query: 128 ESYFNIDIGSG 138
+ +D +G
Sbjct: 2565 KGLITVDSSTG 2575
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLTGGPDQVYLIV--- 69
L + + A D D + ++Y +S+GN +SYF+++ + S L V++++
Sbjct: 1529 LLVHHVMAKDKDEGRNGHVTYSVSSGNEKSYFHMESTGHLFLNSSLDYESQHVHILIVQA 1588
Query: 70 --------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
++V +VND+ P+ +Y ++EN+ IVQ+ D D + +
Sbjct: 1589 RDNGVPSLSSTQTLTVKVLDVNDHPPVFQQHIYNTTVIENRDPGEIIVQVTTVDLDSEVN 1648
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+SY + G F I+ +G +
Sbjct: 1649 SAVSYSLLPGPGYELFRINSHTGHI 1673
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
G Y V I +Q++NDN P+ Y + E Q ++Q+ A+D D + +ISY
Sbjct: 2072 GHQTAYARVAITLQDINDNAPVFKQSYYRTAVWEGQIHNTYVMQVLATDSDSGVNGQISY 2131
Query: 121 KISAGNPESYFNIDIGSGSLG 141
I GN + F ID G L
Sbjct: 2132 FIMDGNHNNAFVIDSVRGILA 2152
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 49 YFNIDIGSDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
++N I + GG P L I V + NDN P+ Y+A I+EN + + P+ Q+
Sbjct: 200 FYNFTIEA-FDGGVPPKTGQLQAQITVLDENDNQPVFNQSEYHAVILENATLMTPVCQIF 258
Query: 107 ASDGDLDPDQRISYKISA--GNPESYF 131
A+D DL + ++ Y I+ +P +F
Sbjct: 259 ATDADLGSNGQVIYGINRRQSDPNEFF 285
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
DG LD + + Y+++ SD P + IQV +VNDN P+ +
Sbjct: 407 DGPLDREIKDLYELTV----------TASDYGCPPLSSVITFQIQVTDVNDNPPVFHQTI 456
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
Y I E+ + ++ A+D DL D I Y I + FNID
Sbjct: 457 YEESIDEDVRVGTAVFRVKATDKDLGGDSEIIYSIVQSEQKCPFNID 503
>gi|443729752|gb|ELU15555.1| hypothetical protein CAPTEDRAFT_62731, partial [Capitella teleta]
Length = 639
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----IGSDLT 59
+ Y A ++EN IV + A+D D++ + R+ Y++ S+F ID I + L+
Sbjct: 441 ERTYTASLIENNFVGKFIVHVNATDADVNENARVMYQLDGTRDSSFFTIDGDGKIRAKLS 500
Query: 60 ------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQ--IVENQSG 98
G P + + I V+++NDN P+ L P Y + N+
Sbjct: 501 IDREVRRKFQFKVWAFDRGSPRRTGTADISIIVEDINDNSPVFLFPTLYNHSLTISNRVP 560
Query: 99 I-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D +++Y+I+ GN + F++D G+L
Sbjct: 561 VGFAITQIRAHDDDTREAAQLAYQITQGNDDEVFDLDPRYGTL 603
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 30/138 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
P Y QIV NQ+ LD ++R SY ++ + D G D+
Sbjct: 386 PTEY-QIVTNQT--------------LDREKRASYSLAI----------VCRD--HGKDK 418
Query: 65 VYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
I +++V + NDN P+ + Y A ++EN IV + A+D D++ + R+ Y++
Sbjct: 419 KISIEHLRVSVLDRNDNYPIFTERTYTASLIENNFVGKFIVHVNATDADVNENARVMYQL 478
Query: 123 SAGNPESYFNIDIGSGSL 140
S+F ID G G +
Sbjct: 479 DGTRDSSFFTID-GDGKI 495
>gi|2381492|dbj|BAA22151.1| DN-cadherin [Drosophila melanogaster]
Length = 3097
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|78706944|ref|NP_001027277.1| Cadherin-N, isoform L [Drosophila melanogaster]
gi|72151394|gb|AAZ66476.1| Cadherin-N, isoform L [Drosophila melanogaster]
Length = 3101
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1422 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1476
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1477 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1536
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1537 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1583
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1521 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1580
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1581 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1640
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1641 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1678
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1394 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1451
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1452 RYEITSGNIGGAFAVKNMTGAI 1473
>gi|24584873|ref|NP_724071.1| Cadherin-N, isoform D [Drosophila melanogaster]
gi|13124002|sp|O15943.2|CADN_DROME RecName: Full=Neural-cadherin; AltName: Full=Cadherin-N;
Short=dN-cadherin; Flags: Precursor
gi|7298411|gb|AAF53635.1| Cadherin-N, isoform D [Drosophila melanogaster]
Length = 3097
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
Length = 5085
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ ++ EN+ I+ ++A+DGD P+ I YKISAGN ++ F +
Sbjct: 3196 HQVRVPENEPVNTTILTVSATDGDDGPNGMIRYKISAGNEKNEFFVHSITGAVTILEPLD 3255
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+DL P Q I+ + V ++NDN P +Y A + EN +
Sbjct: 3256 YDLVQEYKLNITATDLGFEPKQAVAILTVNVSDINDNPPTFNQSIYEAYLPENSPPDSFV 3315
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ A D D I YKI G + +F I +G +
Sbjct: 3316 YKVIARDIDSPKYAVIQYKILGGTGKDHFRIREDTGEIA 3354
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V + NDNVP+ +D ++E +++ A+D DL P+ +++ ISAGN
Sbjct: 1341 VHIEVLDENDNVPLFVDDKSSISVLETTPTNTELLRFKATDNDLGPNSELAFAISAGNRR 1400
Query: 129 SYFNIDIGSGSL 140
F ID +G+L
Sbjct: 1401 DTFYIDPLTGTL 1412
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 21 IVQLAASD-GDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLIVYIQ 72
+VQL A D D + ISY ++ N YF+ID + + L+ P + ++ +Q
Sbjct: 3103 VVQLMAKDDADFGVNAEISYFMTNVNGSEYFSIDEKSGWVYVRNTLSNVPVRTTFLLKVQ 3162
Query: 73 -----VQNVNDNVPMTL--------DPVYYA-----QIVENQSGILPIVQLAASDGDLDP 114
V D V +TL P + A ++ EN+ I+ ++A+DGD P
Sbjct: 3163 AIDKGVPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDDGP 3222
Query: 115 DQRISYKISAGNPESYFNIDIGSGSL 140
+ I YKISAGN ++ F + +G++
Sbjct: 3223 NGMIRYKISAGNEKNEFFVHSITGAV 3248
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 2245 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAMGDDNRDFTISEDGGVIRVAKNLN 2304
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D S++ P V I V ++NDN P+ LD Y A ++EN
Sbjct: 2305 FERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLAHVMEN--- 2361
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 2362 MVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 2408
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L Y A + E + ++ + A D D+ P + + SY I +GN F +D
Sbjct: 3509 LQSTYDATVSEGATHGTRVLTVRAVDKDIKPQNNQFSYSIISGNLGQAFKVDPQTGDIET 3568
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q ++I++ ++NDN P P + EN+
Sbjct: 3569 AKQLDRETIPIYDLTIGAIDTGSPPQTGTAAIHIELLDINDNGPTFDPPEVVGYVNENEP 3628
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DL P+ +YK+ G +D +G L
Sbjct: 3629 AGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLDKHTGVL 3672
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 29 GDLDPDQRISYKISA--GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
GD+ + + YK + +PE+ +++ + + G P +VY+ V + N+N P
Sbjct: 3027 GDVFSKKTLKYKHTHRPSSPENLYSLTVVATDNGKPPLSSKTVVYVNVVDANNNAPRFDQ 3086
Query: 86 PVYYAQIVENQSGILPIVQLAAS-DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y + EN +VQL A D D + ISY ++ N YF+ID SG
Sbjct: 3087 RSYLYPVPENYGVGKRVVQLMAKDDADFGVNAEISYFMTNVNGSEYFSIDEKSG 3140
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------------- 53
+A + EN + + +A D D + + +I AGN +F +D
Sbjct: 405 FATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNTPSFDIVRVNGRL 464
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D P + I V +VND+ P+ Y A + E
Sbjct: 465 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSF 524
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y +GN + +F ID +G
Sbjct: 525 VASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTG 561
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ VY V ++NDN P+ + A IVEN + PI+ +AA D D + R+ Y ++ G+
Sbjct: 2015 VTVYCNVVDLNDNAPIFEAGPHAADIVENTTIGTPILSVAAQDLDSGDNGRVIYAVAGGD 2074
Query: 127 PESYFNI 133
F +
Sbjct: 2075 ENGDFGV 2081
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ L G LD + R +Y + D P V + V + NDN
Sbjct: 2187 PVDGLLRVSGSLDRELRSNYTLEV----------TAKDRGEPPRSSSTAVTVTVLDENDN 2236
Query: 80 VPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
P+ DP Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 2237 SPV-FDPRQYSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAMGDDNRDFTI 2290
>gi|301624872|ref|XP_002941722.1| PREDICTED: protocadherin Fat 2-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1196
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V++ + EN ++ + A D D D + Y I G+ S F+I+
Sbjct: 1041 VFHGSVQENSPPGTQVLSITARDEDKGKDGEVRYLIRDGSDLSVFSINEETGALRTEAPL 1100
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+DL P VYI+V ++NDN+P V+YA + EN +
Sbjct: 1101 DRESVSHYWLTVYATDLGSIPLTSVAEVYIEVTDINDNMPQLSQAVFYASVTENSPPDVS 1160
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++QL A D D + S++ S GN + +F ++
Sbjct: 1161 VLQLNAFDSDSVSAGKNSFQFSNGNSQGFFALN 1193
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 27/143 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISA--GNP---------------------ESYFNIDIGSD 57
I+Q++ASD DL + I+Y +++ G P + ++ + + +
Sbjct: 531 ILQVSASDADLGNNGNITYTLASPKGAPFEINQFTGVITNKRMLDYELTQRWYRLRVWAS 590
Query: 58 LTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P Q + + + + N+NDN PM I + S +V L+A D +D
Sbjct: 591 DLGSPFRQQSEVFISLILNNLNDNSPMFEQVNCNIHIPRDISIGEKVVALSAVD--IDEL 648
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
Q I Y+I +GN + F ID SG
Sbjct: 649 QNIQYEIVSGNEQQKFKIDPTSG 671
>gi|24584871|ref|NP_724070.1| Cadherin-N, isoform F [Drosophila melanogaster]
gi|22946725|gb|AAN10994.1| Cadherin-N, isoform F [Drosophila melanogaster]
Length = 3096
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------YFNIDIGSDLTG 60
Y + EN PI+QL A+DGD + + Y+ G P + F ID S L
Sbjct: 428 YRETLRENVEEGYPILQLRATDGDAPLNANLHYRF-VGPPATRKAAAAAFEIDPRSGLIS 486
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 487 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 546
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 547 DVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEI 592
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 540 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLD 599
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y++ IQV ++ND+ P+ + + ++EN
Sbjct: 600 FEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLGHS 659
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 660 VIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 696
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 956 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1015
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1016 DREAVPVYELTAYAVDRGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1075
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1076 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1114
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 867 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 926
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 927 GIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 986
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 987 QYTFQNGEDGDGDFTIEPTSG 1007
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ ++EN ++ + A D D + R+ Y ++ P++ F I+ +
Sbjct: 646 FQVSVLENAPLGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLD 705
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V + V +VNDN P Y+ ++ E+ + +
Sbjct: 706 RESVEHYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHLRLNEDAAVGTSV 765
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V + A D D + ISY+I+ GN + F I G
Sbjct: 766 VSVTAV--DRDANNAISYQITGGNTRNRFAISTQGG 799
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 751 YHLRLNEDAAVGTSVVSVTAVD--RDANNAISYQITGGNTRNRFAISTQGGVGLVTLALP 808
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 809 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 866
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 867 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 903
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1076 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1135
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1136 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGTIGRIPAYDPDV--S 1193
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1194 DHLFYSFERGNELQLLVVNQTSGEL 1218
>gi|198475483|ref|XP_002132931.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
gi|198138844|gb|EDY70333.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
Length = 3116
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1437 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1491
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1492 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1551
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1552 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1598
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1536 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1595
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1596 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1655
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1656 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1693
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1409 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1466
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1467 RYEITSGNIGGAFAVKNMTGAI 1488
>gi|24584879|ref|NP_724074.1| Cadherin-N, isoform G [Drosophila melanogaster]
gi|22946728|gb|AAN10997.1| Cadherin-N, isoform G [Drosophila melanogaster]
Length = 3096
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
>gi|78706946|ref|NP_001027278.1| Cadherin-N, isoform K [Drosophila melanogaster]
gi|72151393|gb|AAZ66475.1| Cadherin-N, isoform K [Drosophila melanogaster]
Length = 3100
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1422 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1476
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1477 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1536
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1537 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1583
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1521 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1580
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1581 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1640
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1641 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1678
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1394 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1451
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1452 RYEITSGNIGGAFAVKNMTGAI 1473
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------YFNIDIGSDLTG 60
Y + EN PI+QL A+DGD + + Y+ G P + F ID S L
Sbjct: 428 YRETLRENVEEGYPILQLRATDGDAPLNANLHYRF-VGPPATRKAAAAAFEIDPRSGLIS 486
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 487 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 546
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 547 DVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEI 592
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 540 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLD 599
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y++ IQV ++ND+ P+ + + ++EN
Sbjct: 600 FEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLGHS 659
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 660 VIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 696
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 956 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1015
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1016 DREAVPVYELTAYAVDRGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1075
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1076 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1114
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 867 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 926
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 927 GIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 986
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 987 QYTFQNGEDGDGDFTIEPTSG 1007
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ ++EN ++ + A D D + R+ Y ++ P++ F I+ +
Sbjct: 646 FQVSVLENAPLGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLD 705
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V + V +VNDN P Y+ ++ E+ + +
Sbjct: 706 RESVEHYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHLRLNEDAAVGTSV 765
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V + A D D + ISY+I+ GN + F I G
Sbjct: 766 VSVTAV--DRDANNAISYQITGGNTRNRFAISTQGG 799
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 751 YHLRLNEDAAVGTSVVSVTAVD--RDANNAISYQITGGNTRNRFAISTQGGVGLVTLALP 808
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 809 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 866
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 867 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 903
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1076 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1135
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1136 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGTIGRIPAYDPDV--S 1193
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1194 DHLFYSFERGNELQLLVVNQTSGEL 1218
>gi|268574264|ref|XP_002642109.1| C. briggsae CBR-CDH-4 protein [Caenorhabditis briggsae]
Length = 4339
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYY 89
LD ++R +Y I+ D +D P + L V+I++ + ND+ P+ +Y
Sbjct: 994 LDREKRSAYWITVEAR------DAKTDFYKDPRRRAVLHVFIRILDRNDHRPVAKSAMYI 1047
Query: 90 AQIVENQSGILPIVQLAASDG-DLDPD--QRISYKISAGNPESYFNIDIGSG 138
A ++EN + IV++ A+D D+D D +++KI G+P+S+F ID+ SG
Sbjct: 1048 ASVLENSPANVVIVKVEATDADDIDNDGAAPLTFKIERGDPQSFFRIDLASG 1099
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 33/158 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGD-LDPD--QRISYKISAGNPESYFNIDIGSDLT--- 59
+Y A ++EN + IV++ A+D D +D D +++KI G+P+S+F ID+ S
Sbjct: 1045 MYIASVLENSPANVVIVKVEATDADDIDNDGAAPLTFKIERGDPQSFFRIDLASGYITTS 1104
Query: 60 ---------------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
GG Q+ ++V ++V + NDN P +++ +
Sbjct: 1105 GIRRLDREKQAEHELWISICDGGEPQLCSNVVVIVKVLDENDNAPTFTQAMHHYNVRSKH 1164
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
G L ++ A D D + +SY ++ G+P F+ID
Sbjct: 1165 IGKL--CRIFAVDIDEGENSHLSYNVTEGDPR--FSID 1198
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
++V + NDN P ++ +A + EN S + + A D D D + I+Y I +GN ES
Sbjct: 1450 LEVTDENDNAPYFVEHTAWAFVDENDSVDDVLATVTAFDRDQDDNGIITYSIVSGNEESL 1509
Query: 131 FNIDIGSGSL 140
F ID SG +
Sbjct: 1510 FKIDSHSGEV 1519
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-----DPDQRISYKISAG 125
+ +++VNDN+P+ + P A++ + I ++A+D D DP+Q++ YKI G
Sbjct: 2273 VMIEDVNDNMPVFIRPEVKAEVSDAAISGQFITIMSATDMDTTSSLDDPNQKLLYKIVDG 2332
Query: 126 NPESYFNIDIGSGSL 140
+ E+ FNI +G +
Sbjct: 2333 D-ETLFNISPSTGEV 2346
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------------- 55
++E++ ++ + A+D D ++R+SY I++GN + +F +DI
Sbjct: 872 VMEDEPVGFTVLHIIATDNDSRDNKRVSYVINSGNEKGHFALDINTGVLTVAKPLDREDV 931
Query: 56 ---------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
SD P + ++++ VQ+VND+ P L Y + + E+ ++ +
Sbjct: 932 HHFVLNVSVSDHGRIPLSTFQVLHVYVQDVNDSPPRFLRERYLSNVSESAPVGTSVLTVH 991
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL +SY I G + F ++ +G
Sbjct: 992 ATDKDLGASTNLSYSIPQGVAGNKFTVNARTG 1023
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVN 77
P QL + G L ++ Y++ PE + +++ +V +V ++ N
Sbjct: 802 PAFQLDSGTGALTLQSQLDYEV---QPEYTLVVKATDQAKDSEKRLFTLVTCKVIVEDEN 858
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
DN+P+ ++E++ ++ + A+D D ++R+SY I++GN + +F +DI +
Sbjct: 859 DNIPI-FKSKGQVDVMEDEPVGFTVLHIIATDNDSRDNKRVSYVINSGNEKGHFALDINT 917
Query: 138 GSL 140
G L
Sbjct: 918 GVL 920
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V YA + EN G + A G L Q + Y++ + Y + +D P
Sbjct: 265 VRYA-LAENPDGAF---HVGAKSGSLMLRQSLDYEVR----QKYGLVLTATDGGSPPLSS 316
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ + ++VQ+VNDN P P Y ++E+ S +Q++A+D D + R+++K+ G
Sbjct: 317 NMTLLVEVQDVNDNAPTFERPQYKVNVLESLSANSQFLQVSATDKDTGNNARLTFKLLEG 376
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNP 127
V IQ+ +VN+N P L+ Y A I E+ +++++A+D D+ D I+Y+I GN
Sbjct: 1789 VRIQIADVNNNAPRFLESAYRASIREDTPPGTTVIRVSATDLDISRDNHNINYRIMDGNA 1848
Query: 128 ESYFNIDIGSGSLG 141
F + SGSLG
Sbjct: 1849 GGTFVV---SGSLG 1859
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 29/165 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNID--IGSDLT 59
L+ Y A I E+ +++++A+D D+ D I+Y+I GN F + +G +
Sbjct: 1804 LESAYRASIREDTPPGTTVIRVSATDLDISRDNHNINYRIMDGNAGGTFVVSGSLGEVIL 1863
Query: 60 GGP-DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQS 97
P D+ +++Y I + +VND P T + YY + +
Sbjct: 1864 AKPLDREKVMMYSLKVVAIDRGTPSMNATAQVIISIDDVNDYAP-TFNQTYYEVFISEMA 1922
Query: 98 --GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
G + ++Q++A+D D ++ Y I++GN ++ F++D +G++
Sbjct: 1923 TPGAV-VIQVSATDKDEGRHAQVKYDITSGNEDNKFSLDPKTGTI 1966
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------------------I 54
++Q++A+D D ++ Y I++GN ++ F++D +
Sbjct: 1928 VIQVSATDKDEGRHAQVKYDITSGNEDNKFSLDPKTGTITVRGKLDYDTVPEFKLVVRAM 1987
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA-ASDGDLD 113
SDL P + V+I++++ NDN P Y + VE S I V A A D D
Sbjct: 1988 DSDLES-PLSSLVSVFIRIKDENDNSPH-FPLAMYTEFVEESSPIGTTVFTARAMDADRG 2045
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
+++Y ++ G F ID +G
Sbjct: 2046 LYGKLNYTMAEGEGRDKFRIDRDTG 2070
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGS-------- 56
Y Q+ E+ + I + A D + + Y I +G+PE YF+I +GS
Sbjct: 132 YGFQVREDATARTVIGTVVAKSSDRGANG-LRYSIYSGDPEGYFSIHALMGSITVQRPLD 190
Query: 57 -----------DLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
T G P + V + + +VNDN P P I EN P
Sbjct: 191 HELHPFLLLNVQATSGHPPSYGHTQVNVTIWDVNDNAPSFESPSLKISIPENVEVDTPTY 250
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + Y + A NP+ F++ SGSL
Sbjct: 251 VAHARDADGGRNGAVRYAL-AENPDGAFHVGAKSGSL 286
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TG 60
L Y + + E+ ++ + A+D DL +SY I G + F ++ + + T
Sbjct: 969 LRERYLSNVSESAPVGTSVLTVHATDKDLGASTNLSYSIPQGVAGNKFTVNARTGVVETA 1028
Query: 61 GP-----DQVY-LIVYIQ--------------VQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP Y VY+ V +VND+ P D + + EN +
Sbjct: 1029 GPLDREDTATYEFAVYVTDGSFHFDTCVVVVSVLDVNDHSPKFRDSCHPLYVPENNE-LK 1087
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I L ASD D+ P+ I Y I+ GN + F +D +G L
Sbjct: 1088 VIHTLVASDEDVGPNADIVYSITDGNAGNKFGVDSRTGRL 1127
>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----------------------E 47
++E+Q + + A+D D + R++Y+I +GN +
Sbjct: 789 VMEDQPVGFVALYVKATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSILKPLDREEQ 848
Query: 48 SYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FN+ I ++ G P Q ++ + V +VND VP + Y AQ+ ENQ ++ ++
Sbjct: 849 DIFNLTITAEDHGMPQQSSAQLLCVHVIDVNDEVPWFEETQYEAQVSENQPSGTSVLTVS 908
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD DL P+ +++Y +G E FNI+ +G
Sbjct: 909 ASDLDLGPNGQVTY---SGISEEDFNINPVTG 937
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
Y AQ+ ENQ ++ ++ASD DL P+ +++Y +G E FNI+ +
Sbjct: 890 YEAQVSENQPSGTSVLTVSASDLDLGPNGQVTY---SGISEEDFNINPVTGVITTTKALD 946
Query: 56 SDLT-----------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+L GG P+ V I+V + NDN P +YY+ V +P+
Sbjct: 947 RELREYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNTPY-FGRLYYSIEVPENLEAMPL 1005
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D I+YKI+ G+ F++D SG L
Sbjct: 1006 FTLRANDQDSGKSGIINYKITVGDSSGDFHLDKLSGVL 1043
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y+ V I +Q+VNDN+P Y A I E Q PI+Q+AA D D + ++ Y + +
Sbjct: 1386 YMAVNIILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSLRSS 1445
Query: 126 NPESYFNIDIGSGSL 140
+ F ID +GS+
Sbjct: 1446 SRSGLFKIDPLTGSI 1460
>gi|48976105|ref|NP_001001754.1| cHz-cadherin precursor [Gallus gallus]
gi|34761804|gb|AAQ82055.1| cHz-cadherin [Gallus gallus]
Length = 2819
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVN 77
I P + ++ D ++R SY I + +S + G + G P+ V I V +VN
Sbjct: 1095 IEPETGIISTHASFDREKRASYLIEVQSQDSSESARPG--VHGHPNTDTAYVRIFVSDVN 1152
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
DN P PVY + E++ P+V A D D + ++ Y+I++GN + F+++ +
Sbjct: 1153 DNAPAFPQPVYEVSVDEDRDVGSPVVTATADDRDEGANAKLRYQITSGNTKGVFDVEPEA 1212
Query: 138 GSL 140
G++
Sbjct: 1213 GTV 1215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
PVY + E++ P+V A D D + ++ Y+I++GN + F+++
Sbjct: 1161 PVYEVSVDEDRDVGSPVVTATADDRDEGANAKLRYQITSGNTKGVFDVEPEAGTVFIVQS 1220
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI- 99
+ SD G + + ++ I V N ND P+ Y+ I+E + +
Sbjct: 1221 LDYEEEQRYELRLVASD---GKWENHTLIIINVVNKNDEAPVFTQNEYHGSILEELTDLP 1277
Query: 100 LPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+ +++++A+D D + DQ +SY + S F+I+ +G +
Sbjct: 1278 VFVLKVSATDPDQEADQNALSYSLHGQGAGSEFSINENTGEI 1319
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQ+ NVND P+ PVY + E+ + + A D D D + Y I+ GN E
Sbjct: 601 VRIQMANVNDEAPVFSQPVYRTFLSEDAGPSTLVATVRAKDPDGDG---VLYLIAGGNEE 657
Query: 129 SYFNIDIGSG 138
F +D G
Sbjct: 658 GNFELDSQKG 667
>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
Length = 3938
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN + +AA D D D + Y + AG S F+I D G T P
Sbjct: 1035 VHQGQVQENSPSGTSVTVVAAQDDDSGLDGELQYFLRAGTSLSAFSIHQDTGMIQTVAPL 1094
Query: 63 DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ ++ VYI+V +VNDN P PV+Y + E+
Sbjct: 1095 DREFMSCYWLTVQAVDRGSVPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVREDAPLHTS 1154
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN F I +G L
Sbjct: 1155 VLQLDARDPDSSSKGKLTFNITSGNQMGVFAIHPLTGLL 1193
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
IVE+ S + Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2254 HIVEDGSDVSKFFQINGSTGEMSTVQELDYE-----AQQHFHVKVRAMDRGDPPLTGETL 2308
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P P Y A + E + ++++ A D D R+ Y I +GN +
Sbjct: 2309 VVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDSGDTSRLEYLILSGNQD 2368
Query: 129 SYF 131
+F
Sbjct: 2369 RHF 2371
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
I+E+ P+ +LAA+D D + ++ Y I+ GN E F+I + S L
Sbjct: 723 ILESAPLNTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIGLESGLLTIASPLDYEAT 782
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ NDN P Y + E+ + QL
Sbjct: 783 SFYILNVTVYDLGTPQKSSWKVLTVNVEDWNDNAPRFPPGGYQVTVSEDTEVGTTVAQLK 842
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R+ Y + + P F++ +G L
Sbjct: 843 AKDADSEDNGRVRYTLLS--PTEEFSLHPLTGEL 874
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D +SY++ N F ID +
Sbjct: 2746 DP-YKAVLTENMPVGTSVIQVTANDQDTGNDGHVSYRLPVDPGSNIHELFAIDSETGWIT 2804
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q+Y ++V + + + NDN P Y +VEN
Sbjct: 2805 TLQELDCETSQIYRFYVVAHDHGQTIQLSSQVLVEVSITDENDNAPRFASEDYRGSVVEN 2864
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
P+ L D D+ + +++++ I+ G+P F I
Sbjct: 2865 SEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGI 2903
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D +SY++
Sbjct: 2729 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGHVSYRLPVDPGS 2788
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2789 NIHELFAIDSETG 2801
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ + +++++ I+ G+P F I +G +
Sbjct: 2857 YRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVGDEWRIFARK 2916
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q ++V I V ++NDN P +Y ++ E+ I
Sbjct: 2917 TLDREHMAKYLLRVTASDGKFQASVLVEIFVLDLNDNSPQCSQLLYTGKVSEDVPLGHFI 2976
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + + F +D +G L
Sbjct: 2977 LKISATDLDSDTNAQITYSLHGPGADD-FKLDPHTGEL 3013
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2118 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2174
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY + E P
Sbjct: 2175 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTP 2234
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++ L ASD D ++ ISY I + +F I+ +G +
Sbjct: 2235 VIHLLASDQDSGQNRDISYHIVEDGSDVSKFFQINGSTGEM 2275
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQ---LAASDGDLDPDQRISYKISAGNPESYFNIDIGSD 57
M+ V Y N++G+ + L ++ +LD ++ SY++ GS+
Sbjct: 1629 MSSSEVTYELREGNKNGVFSMNSYSGLISTQKNLDHEKISSYQLKIR----------GSN 1678
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL-----PIVQLAASD 109
+ G V ++VYI + NDN PM + Q+ E S I+ P+V + ASD
Sbjct: 1679 MAGAFTDVMVLVYII--DENDNAPMFSKSTFVGQVSEAAPLNSMIMDENNNPLV-IHASD 1735
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
GD + + + YKI + ID G+L
Sbjct: 1736 GDTEANSLLVYKILEPEALKFLKIDPSMGTL 1766
>gi|347543915|gb|AEP02530.1| CDH23, partial [Rousettus leschenaultii]
Length = 3276
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 991 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFRVGYRDAVVRTVVNL 1050
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1051 DRETTAAYTLVLEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1105
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN S F I + SG L
Sbjct: 1106 DIPEGHSIVQLMATDADEGEFGRVWYRILHGNHGSNFRIHVSSGLL 1151
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 530 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 589
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 590 YSIVNASAFGSYFDISVYEG 609
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1525 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRVSGEIATRPAPP 1584
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1585 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTVNT 1644
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F+ID +G
Sbjct: 1645 TLITIQAQDLDEGPNGTVTYAIVAGNIINTFHIDRHTG 1682
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1490 VASDRGIPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1549
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1550 GINSVLSYYITEGNEDMTFRMDRVSGEIA 1578
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN S F I + S L
Sbjct: 1099 YEASVPEDIPEGHSIVQLMATDADEGEFGRVWYRILHGNHGSNFRIHVSSGLLMRGPQPL 1158
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1159 DREQDSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1218
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y+I +G E F ID +G
Sbjct: 1219 SVIVVRATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 1255
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1807 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHIL 1866
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1867 ASDADSGCNALLTFNITAGNRERAFAINATTG 1898
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 558 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSH 617
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 618 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 677
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 678 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 720
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A D D + +SY++ G P F I+
Sbjct: 887 FVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTTELD 946
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 947 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1006
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F +
Sbjct: 1007 VWLNCTDNDVGLNAELSYFITGGNVDGKFRV 1037
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D + +++ I+AGN E F I+ + D P+
Sbjct: 1862 VAHILASDADSGCNALLTFNITAGNRERAFAINATTGIVTVNRPLDRERIPEYKLTISVK 1921
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASD 109
+ + ++ I + + NDN P+ + Y A+++EN P+ L A D
Sbjct: 1922 DNPENPRIARRDFDLLLIFLADENDNHPLFTESTYQAEVMENSPAGTPLTVLNGPILALD 1981
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
DLD ++Y++ G F+ID +G
Sbjct: 1982 ADLDVYAVVTYQL-LGTQSGLFDIDNSTG 2009
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + + F +D
Sbjct: 587 YKVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESDQRSFRLDPVSGRLSTISSL 646
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 647 DREEQAFYSLLVLATDLGTPPQSSVAQINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSY 706
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL P+ + Y ISAG+ S F I+ SG
Sbjct: 707 ITTVSATDPDLGPNGTVKYSISAGD-RSRFQINAQSG 742
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E + + +++++ASD D + I Y + GN E
Sbjct: 1195 VHVYMKDINDNAPKFLKDFYQATISETAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEE 1254
Query: 129 SYFNIDIGSGSL 140
F I SG +
Sbjct: 1255 RQFAIGSTSGQV 1266
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2647 PFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2705
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2706 IVHGNKENSFSINHATGEI 2724
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ ++A D D + I+Y ISAGN E F I+ + +
Sbjct: 3107 VRTVSARDRDAAMNGLITYTISAGNEEGIFAINSSTGVLTLAKALDYELCQKHEITISAT 3166
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG Y V I V +VNDN P+ + Y+ ++EN ++ L A+D D +
Sbjct: 3167 DGGWVARTGYCSVTITVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIHLNATDNDSGTNA 3226
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I+Y + + + + F ID +G
Sbjct: 3227 VIAYTVQSSDSD-LFVIDPNTG 3247
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3198 YFPTVLENAPSGTTVIHLNATDNDSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3256
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3257 FETKQSYHLIVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3316
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3317 GEVFASDRDMGTDGEVHYLIFGNSRKKGFQINKKTGQI 3354
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGS---DLTGG 61
+Y QI E + ++A D D P R SY I +GN F+++ + +T
Sbjct: 3407 IYNVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSVNPQTGQITVTAE 3466
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ L +Y + ++++NDN PM V +++EN+
Sbjct: 3467 LDRETLPIYNLTVLAVDSGIPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3524
Query: 101 PIVQLAASDGDLDPDQ--RISYKISAGNPESYFNIDIG 136
P++ L ++D DL P+Q Y +S G +YF+++
Sbjct: 3525 PVMTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNTA 3562
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L TGG
Sbjct: 496 VSATDGDSGLNANLRYSIISGNGLGWFHISEHSGLVTTGATGGLNRELASEIVLNISARD 555
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 556 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYKVSVVENAPTGTELLVLGATDGDLGDNG 615
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + + F +D SG L
Sbjct: 616 TVRFSLQEAESDQRSFRLDPVSGRL 640
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L Y A I E + + +++++ASD D + I Y + GN E F I S L
Sbjct: 1210 LKDFYQATISETAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIGSTSGQVTLI 1269
Query: 60 GGPD----QVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y +V I + + NDN P + ++EN
Sbjct: 1270 GKLDYEATPAYFLVIQAVDSGTVSLNSTCTLNIDILDENDNTPCFPKSTLFVDVLENMRI 1329
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1330 GELVSSVTATDSDSGDNADLHYSITGSNNHGTFSISPNTGSI 1371
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I E+ I+Q+ A+DGD + ++ Y I G+ F +D
Sbjct: 2157 LYKVEINEDTLTGTDILQVFAADGDEGTNGQVRYGIVDGSTNQEFRMDSVTGVITVVKPL 2216
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP Y + EN G LP
Sbjct: 2217 DREKTATYLLTVQAADRGSTPRTDTSTVSIVLLDMNDFVPTFELSPYLVNVPENL-GTLP 2275
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + ++SY + GN + F + SG L
Sbjct: 2276 KTILQVVARDDDQGSNSKLSYVLRGGNEDQAFTLS-ASGEL 2315
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAG 125
V + V+++NDN P+ DP E+ S ++ A+D D+ D R SY+I G
Sbjct: 121 VRVLVRDLNDNAPVFPDPTITVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRG 179
Query: 126 NPESYFNIDI 135
N F +DI
Sbjct: 180 NEAGRFRLDI 189
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPTITVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPHYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAVVGSSVLQVAAADADEGTNADIHYRLQDEGTP---FQMDPETG 303
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2068 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVATD 2127
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I E+ I+Q+ A+DGD + +
Sbjct: 2128 KGQPALSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLTGTDILQVFAADGDEGTNGQ 2187
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I G+ F +D +G
Sbjct: 2188 VRYGIVDGSTNQEFRMDSVTG 2208
>gi|241735363|ref|XP_002413931.1| Gb2-cadherin, putative [Ixodes scapularis]
gi|215507785|gb|EEC17239.1| Gb2-cadherin, putative [Ixodes scapularis]
Length = 1518
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 43/176 (24%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-------GNPESYFNIDIG 55
P Y AQI E LP I+Q+ A+DGD D + I Y ++ GN + N G
Sbjct: 104 PTYEAQITEENDRNLPQKILQVTATDGDKDRESLIVYFLTGQGVDEDLGNSKFAINTTTG 163
Query: 56 S---------DLTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYA 90
DL G Q V+ + +++VNDN P +Y
Sbjct: 164 EIYVLKPLDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTG 223
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQ----RISYKISAG----NPESYFNIDIGSG 138
+ EN + + ++ + A+D D DP++ R++Y I N E F ID +G
Sbjct: 224 NVTENGTAGMTVMTMTATDYD-DPNEGNNARLTYSIEQNQVNENGELIFTIDEETG 278
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY 120
++ + V I+V++VNDN P+ P Y AQI E LP I+Q+ A+DGD D + I Y
Sbjct: 81 NENHTTVLIKVKDVNDNAPIFDRPTYEAQITEENDRNLPQKILQVTATDGDKDRESLIVY 140
>gi|149038756|gb|EDL93045.1| rCG22004, isoform CRA_c [Rattus norvegicus]
Length = 2935
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 615 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 674
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 675 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 734
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F + + SG L
Sbjct: 735 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLL 775
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 154 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 213
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 214 YSIVNASAFGSYFDISVYEG 233
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1114 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1173
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1174 GINSVLSYYITEGNEDMTFRMDRISGEIA 1202
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1149 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1208
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1209 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNT 1268
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1269 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTG 1306
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 511 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 570
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 571 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 630
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 631 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 661
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1431 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1490
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1491 ASDADSGCNALLTFNITAGNRERAFFINATTG 1522
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I +
Sbjct: 182 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSR 241
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 242 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 301
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 302 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 344
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN + F + + S L
Sbjct: 723 YEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLLVRGPRPL 782
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 783 DRERNSSHVLMAEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGT 842
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y+I +G E F ID +G
Sbjct: 843 SVIVVRATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 879
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 1688 PAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 1747
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P V I + ++ND+ P L+P+ ++E+
Sbjct: 1748 IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGT 1807
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 1808 VIANVTAIDLDLNP--KLEYHILSIVAKDDTDRLVPDQEDAFAVNINTGSV 1856
>gi|149038757|gb|EDL93046.1| rCG22004, isoform CRA_d [Rattus norvegicus]
Length = 2934
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+AGN + F++ +G
Sbjct: 615 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 674
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 675 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 734
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F + + SG L
Sbjct: 735 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLL 775
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 154 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 213
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 214 YSIVNASAFGSYFDISVYEG 233
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1113 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1172
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1173 GINSVLSYYITEGNEDMTFRMDRISGEIA 1201
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1148 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1207
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1208 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNT 1267
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1268 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTG 1305
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 511 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 570
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 571 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 630
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 631 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 661
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1430 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1489
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1490 ASDADSGCNALLTFNITAGNRERAFFINATTG 1521
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I +
Sbjct: 182 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSR 241
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 242 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 301
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 302 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 344
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN + F + + S L
Sbjct: 723 YEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLLVRGPRPL 782
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 783 DRERNSSHVLMAEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGT 842
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y+I +G E F ID +G
Sbjct: 843 SVIVVRATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 879
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 1687 PAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 1746
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P V I + ++ND+ P L+P+ ++E+
Sbjct: 1747 IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGT 1806
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 1807 VIANVTAIDLDLNP--KLEYHILSIVAKDDTDRLVPDQEDAFAVNINTGSV 1855
>gi|61162135|dbj|BAD91056.1| Cj-cadherin [Caridina japonica]
Length = 3000
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 31/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
+Y A++ EN+ ++ + A D LD RI Y+I+ GN F + G+ GP
Sbjct: 1332 LYEAEVDENEDIQHTVLTVTAKD--LDESSRIRYEITNGNIGGAFAVKNMTGAIYVAGPL 1389
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI-- 102
++ V I + +VND P P+Y A I+E QS LPI
Sbjct: 1390 DYETRKRYELTLVATDSVNEATTKVIIHIADVNDRPPEFDRPIYEATILEEQSENLPISL 1449
Query: 103 VQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
+++ A+DGD D Q I Y ++ NP +S F ++ +G +
Sbjct: 1450 IKVTATDGDRDRVQDIVYFLTGQGIYQDNPDQSQFEVNRTTGEI 1493
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 46/159 (28%)
Query: 5 PVYYAQIVENQSGILPI--VQLAASDGDLDPDQRISYKISA------------------- 43
P+Y A I+E QS LPI +++ A+DGD D Q I Y ++
Sbjct: 1431 PIYEATILEEQSENLPISLIKVTATDGDRDRVQDIVYFLTGQGIYQDNPDQSQFEVNRTT 1490
Query: 44 ---------------GNPESYFNI----DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTL 84
G P F + + G+ L G Y V + ++++NDN P+
Sbjct: 1491 GEIFVKKPLDRDHPKGRPTWRFTVFAQDEGGTGLVG-----YADVQVNLKDINDNGPVFP 1545
Query: 85 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
VYY + EN + + ++ + A D D DP + + K++
Sbjct: 1546 QMVYYGNVTENGTQGMVVMTMTAEDYD-DPSEGTNAKLT 1583
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G P+ V + I + + NDN P +Y A++ EN+ ++ + A DLD RI
Sbjct: 1305 GRPNTVTKFIRIGIADKNDNPPFFDKNLYEAEVDENEDIQHTVLTVTAK--DLDESSRIR 1362
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I+ GN F + +G++
Sbjct: 1363 YEITNGNIGGAFAVKNMTGAI 1383
>gi|149038755|gb|EDL93044.1| rCG22004, isoform CRA_b [Rattus norvegicus]
Length = 2970
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 615 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 674
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 675 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 729
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F + + SG L
Sbjct: 730 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLL 775
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 154 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 213
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 214 YSIVNASAFGSYFDISVYEG 233
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1114 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1173
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1174 GINSVLSYYITEGNEDMTFRMDRISGEIA 1202
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1149 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1208
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1209 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNT 1268
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1269 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTG 1306
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 511 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 570
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 571 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 630
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 631 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 661
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1431 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1490
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1491 ASDADSGCNALLTFNITAGNRERAFFINATTG 1522
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I +
Sbjct: 182 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSR 241
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 242 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 301
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 302 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 344
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D R+ Y+I GN + F + + S L
Sbjct: 737 IVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLLVRGPRPLDRERNSSHVLMAEA 796
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND P+ Y + +GI ++ + A+D D
Sbjct: 797 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTGD 856
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y+I +G E F ID +G
Sbjct: 857 GGLVNYRILSG-AEGKFEIDESTG 879
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 1688 PAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 1747
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P V I + ++ND+ P L+P+ ++E+
Sbjct: 1748 IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGT 1807
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 1808 VIANVTAIDLDLNP--KLEYHILSIVAKDDTDRLVPDQEDAFAVNINTGSV 1856
>gi|73954163|ref|XP_536461.2| PREDICTED: protocadherin Fat 2 [Canis lupus familiaris]
Length = 4354
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1039 VHQGQVQENSPSGTQVMVVAAHDDDSGLDGELQYFLRAGTSLAAFSINQDTGMIQTLAPL 1098
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V +VNDN P PV+Y + E+
Sbjct: 1099 DREFVSCYWLTVLAVDRGSTPLSSVTEVYIEVTDVNDNPPQMSRPVFYPSVREDAPLHTS 1158
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1159 VLQLDARDPDSSSKGKLTFNITSGNNMGFFVIHPVTGLL 1197
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ I++GN +F I + L Q
Sbjct: 1143 PVFYPSVREDAPLHTSVLQLDARDPDSSSKGKLTFNITSGNNMGFFVIHPVTGLLSTARQ 1202
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ +++ V I + +VNDN P+ ++ ++ E S
Sbjct: 1203 LDRENKDEHILEVTVLDNGEPSLKSTSRVVIHIVDVNDNPPVFSHKLFNVRLPERLSPAT 1262
Query: 101 P--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P + +L ASD D + R++Y I + ES F+ID +G
Sbjct: 1263 PGPVYRLVASDPDEGLNGRVTYSIEESDEES-FSIDPVTG 1301
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D ++ +SY+I S G
Sbjct: 2279 VYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYEIVEDGSDISKFFQINGSTGEMSTVQ 2338
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2339 ELDYETQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2398
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2399 HLVLKVQALDPDSRDTSRLEYLILSGNQDRHF 2430
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ +LAA+D D + ++ Y I+ GN E F+I++ + +
Sbjct: 737 LARLAATDPDTGFNGKLVYVIADGNDEGCFDIELETGMLTVAAPLDYEVTSFYILNVTVY 796
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P Y I E+ I +L A D D D +
Sbjct: 797 DLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQITISEDTEVGTTIAELKAKDADSDDNG 856
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 857 RVRYTLLS--PTEKFSLHPLTGEL 878
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2177 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2233
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2234 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTP 2293
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2294 VIQLLASDQDSGQNRDVSYEIVEDGSDISKFFQINGSTGEM 2334
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2788 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDPGS 2847
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2848 NIHELFAIDSETG 2860
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ R ++ I+ G+P F I +G +
Sbjct: 2916 YRGSVVENSEPGEVVATLKTLDADITEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2975
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q ++V I V ++NDN P +Y ++ E+ S I
Sbjct: 2976 TLDREHMAKYLLRITASDGKFQASVLVEIFVLDINDNSPQCSQLLYTGKVSEDTSPGHFI 3035
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3036 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGEL 3072
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P Y A + + + ++Q+ A D D + I Y + G
Sbjct: 1541 FVWVSIHVEDGNLHSPRFTQLHYEASVPDTTASGTELLQVRAMDADRGANAEIHYSLLKG 1600
Query: 126 NPESYFNID 134
N E +FNID
Sbjct: 1601 NSEGFFNID 1609
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ---SGIL-----PIVQLA 106
GS++ G V +VYI + NDN PM L ++ Q+ E S I+ P+V +
Sbjct: 1735 GSNMAGAFTDVMALVYII--DENDNAPMFLKSIFVGQVSEAAPLYSMIMDENNNPLV-IR 1791
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D + + + Y+I +F ID G+L
Sbjct: 1792 ASDSDEEANSLLVYEILESEALKFFKIDPSMGTL 1825
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------- 50
P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2385 PQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINSSSGIISMFNL 2444
Query: 51 ---NIDIGSDL-TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++D +L G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2445 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHIYEAELAENAKVGTKVI 2504
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2505 ELLAIDKDSGPYGTVDYTI 2523
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + + + ++Q+ A D D + I Y + GN E +FNID
Sbjct: 1563 YEASVPDTTASGTELLQVRAMDADRGANAEIHYSLLKGNSEGFFNIDTLLGIITLAQKLD 1622
Query: 54 ----------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ ++ G P + L V I V + + P+ Y+ +I E+ PI
Sbjct: 1623 QANHARYSLTVKAEDQGSPQRHDLATVIINVYPSDSSAPIFSKAEYFVEIPESIPVGSPI 1682
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+ ++Y++ GN + F+++ SG
Sbjct: 1683 LLVSATSSS-----EVTYELREGNKDGVFSMNSYSG 1713
>gi|240977542|ref|XP_002402723.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491226|gb|EEC00867.1| conserved hypothetical protein [Ixodes scapularis]
Length = 117
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAG 125
L ++++V +VNDNVP++++P Y + EN + +VQL A D D D ++++++AG
Sbjct: 39 LDLFVRVDDVNDNVPLSVEPAYQPAVPENAAPGTTVVQLRAFDLDHGGGDAELAFQLTAG 98
Query: 126 NPESYFNIDIGSGSLG 141
+ + +F ID +G G
Sbjct: 99 DSQGHFAIDARTGQGG 114
>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Takifugu rubripes]
Length = 2908
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG--- 60
Y I EN PI+QL A+D D + I Y+ + F ID S L
Sbjct: 156 YRETIRENVEEGYPILQLRATDSDSPTNANIRYRFIGDMVAVARAAFEIDPRSGLITTRG 215
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V + NDNVP + Y + EN
Sbjct: 216 VVDRELNEHYTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKENVR 275
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + + Y I +GN F+ID +G +
Sbjct: 276 PHSEILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEI 318
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y + EN I++++A+D D D + + Y I +GN F+ID + + L
Sbjct: 266 YVVAVKENVRPHSEILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEIQVVAPLD 325
Query: 60 GGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y IV +QV +VNDN P+ + + A ++E+
Sbjct: 326 YEAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASVLESSPVGSS 385
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A D D + R+ Y+++ + ++ F I+ +G
Sbjct: 386 ILHIQAIDTDSGDNARLEYRLTGTSSDTPFIINSATG 422
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS----- 56
L P Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 678 LSPRYQGSVSEDAPPYTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGILRT 737
Query: 57 ------------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+LT P + + + + V +VNDN P+ + + EN +
Sbjct: 738 VRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVFPADDFEVLVKENSA 797
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + +I Y+I GN F +DI SG L
Sbjct: 798 VGSVVAQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 840
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 31/147 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+V ++A+D D+ + RI+Y + P+ F ID I +
Sbjct: 593 VVVISATDDDVGENARITYFLEDNIPQ--FRIDSATGAITLQAELDYEDQMTYTLAITAK 650
Query: 58 LTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
G P D Y V + V +VNDN P L P Y + E+ ++Q++A+D D
Sbjct: 651 DNGIPQKSDTTY--VEVNVNDVNDNAPQFLSPRYQGSVSEDAPPYTSVLQISATDRDAHA 708
Query: 115 DQRISYKISAG-NPESYFNIDIGSGSL 140
+ R+ Y G + + F I+ SG L
Sbjct: 709 NGRVQYTFQNGEDGDGDFTIEPTSGIL 735
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ A ++E+ I+ + A D D + R+ Y+++ + ++ F I+ +
Sbjct: 372 FQASVLESSPVGSSILHIQAIDTDSGDNARLEYRLTGTSSDTPFIINSATGWVTVRSALD 431
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V I V +VNDN P L YY+++ E+ + +
Sbjct: 432 RESVEHYFFGVEARDYGTPPLSATASVTITVMDVNDNRPEFLQKEYYSRLNEDAAVGTSV 491
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ A D D+ + ++Y+I+ GN + F I G+
Sbjct: 492 ATVTAVDRDV--NSAVTYQITGGNTRNRFAISTAGGA 526
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 5 PVYYAQ----IVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--- 56
PV+ A +V+ S + +V Q+ A+D D + +I Y+I GN F +DI S
Sbjct: 781 PVFPADDFEVLVKENSAVGSVVAQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 840
Query: 57 ----DLTGGPDQVYLIVY--------------IQVQNVNDNVPMTLD-PVYYAQIVENQS 97
DL Y+IV I++ + NDN P D + + V N+S
Sbjct: 841 TSLIDLDYETRNEYVIVVQATSAPLVSRATVRIKLVDQNDNRPTLQDFQIIFNNFVSNRS 900
Query: 98 GILP---IVQLAASDGDLDPDQRISYKISAGN 126
P I ++ A D D+ R+ Y I GN
Sbjct: 901 NSFPSGVIGRIPAHDPDV--SDRLYYTIDRGN 930
>gi|358341131|dbj|GAA48880.1| protocadherin Fat 1 [Clonorchis sinensis]
Length = 5772
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GP + ++I+V + NDN P+ + P + +I EN L + + A+D D + +
Sbjct: 1327 AGPMRSLAEIFIEVLDENDNYPIPIAPEFACEIPENSPSGLLVATVLATDADKN-SLPLR 1385
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y ISAG+P+ +F ID SG++
Sbjct: 1386 YHISAGDPQGHFTIDSKSGTI 1406
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD-PDQRISYKISAG 125
I+ ++V++ NDN P+ L P + E+ + QL A+D D D + ISY++S+G
Sbjct: 3559 FILRVEVEDANDNAPICLQPERILSVAEDTKRGTVLTQLVATDADADLLNSEISYRLSSG 3618
Query: 126 NPESYFNID 134
+P S F+I+
Sbjct: 3619 DP-SLFDIN 3626
>gi|405973235|gb|EKC37959.1| Protocadherin Fat 1 [Crassostrea gigas]
Length = 3515
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
D Y+ +V N + L ++++ ASD D + + Y I GN + F ID S L
Sbjct: 1259 FDQPTYSGVVTNPTPGLMVIKVTASDLDKCSQENLEYSIVGGNGDQVFRIDAKSGLISIS 1318
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + I+Y I + N + P+ +Y A ++EN +P
Sbjct: 1319 PRRHSILYPAYMLNVSVSDGVFTSFTTVSISFEESNLHSPVFSKVLYQANLMENVGRGIP 1378
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A DGD ISY + + +FNID +G +
Sbjct: 1379 ITTVKAQDGDRGYFGMISYSVLSHEMRQFFNIDADTGEI 1417
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 33/158 (20%)
Query: 7 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTG-- 60
Y Q++EN +L + Q +DGD ++ Y ++ G+PE+ FNI + GS LT
Sbjct: 217 YQVQLMENCKIGEVLDVYQAEDADGD-----KLWYSLADGDPENQFNINPEYGSILTSKR 271
Query: 61 -----------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G Q + VY+ V ++NDN P Y A I E+ + ++
Sbjct: 272 LDREKRDHYNLTVMATDGIHQTSVKVYVTVLDINDNTPEFTQSEYKADISESAAIGSSVL 331
Query: 104 QLAASDGDLDPDQRISYKIS-AGNPESY--FNIDIGSG 138
++A D DL + R+ YKIS A N + F ID +G
Sbjct: 332 TISAVDIDL--NSRVFYKISGAANAITMDLFEIDSETG 367
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + +VNDN PM P + A I+ + + ++ + A+D DL + +I Y I GN +
Sbjct: 720 VVINITDVNDNSPMFSHPEFQADILLPTAFDVEVITMIATDTDLGGNAKIVYTIKDGNKD 779
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 780 GKFKIDRNTGTI 791
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 25/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLT 59
+Y A ++EN +PI + A DGD ISY + + +FNID L
Sbjct: 1364 LYQANLMENVGRGIPITTVKAQDGDRGYFGMISYSVLSHEMRQFFNIDADTGEIFAERLF 1423
Query: 60 GGPDQV----------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+Q + V + + +VND P L Y + N P++
Sbjct: 1424 DREEQSSYSVTVAATDNGGRMGFTTVVVNITDVNDVAPEFLHTGYKVSVPMNAGKGRPLI 1483
Query: 104 QLAASDGDLDPDQRISYKISAGN---PESYFNIDIGSG 138
Q+ A D DL R++Y I + + F ID SG
Sbjct: 1484 QVQARDSDLGEAGRVTYNIYDASLIISATLFTIDPTSG 1521
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y A + EN + +V++ A+ D+ + +++Y I+AGN F ID + +DL
Sbjct: 2094 YAAAVPENATVGTEVVKVLATSRDIGLNAKMAYSITAGNKNMKFVIDESEGVIRVANDLD 2153
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
VY + V I + +VNDN P Y ++E+ + +
Sbjct: 2154 REVTSVYFLTVMATDLSDSPLSSSTYVRINITDVNDNKPFFSQASYRTSLLEDTAVGQLV 2213
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D + +++ I G+ F I +G +
Sbjct: 2214 YQVHANDTDEGQNALLTFSIIEGDSLHSFEIHPVTGEI 2251
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I V ++NDN P D Y+ +V N + L ++++ ASD D + + Y I GN +
Sbjct: 1245 VHIIVSDLNDNPPY-FDQPTYSGVVTNPTPGLMVIKVTASDLDKCSQENLEYSIVGGNGD 1303
Query: 129 SYFNIDIGSG 138
F ID SG
Sbjct: 1304 QVFRIDAKSG 1313
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 14 NQSGILPIVQ----LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIV 69
N G+ +V+ L + D ++R YK+ I + DL+G +++++
Sbjct: 873 NGKGMFDVVKTSGVLQTTGKPFDREERDHYKV----------IALVEDLSGKQKPLHILI 922
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+I + + NDN P+ ++ Y + + + Q+ A D D D + ++Y + + +
Sbjct: 923 HISILDENDNAPLFVNQPYDTVVSTDTKQGSIVTQVTAIDRDADLNGNVTYTLEKQDGDK 982
Query: 130 YFNIDIGSGSL 140
F +D G+G +
Sbjct: 983 -FEVDAGTGHV 992
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I++ + NDN P + Y A + EN + +V++ A+ D+ + +++Y I+AGN
Sbjct: 2077 IEILDENDNPPEFVLSQYAAAVPENATVGTEVVKVLATSRDIGLNAKMAYSITAGNKNMK 2136
Query: 131 FNIDIGSG 138
F ID G
Sbjct: 2137 FVIDESEG 2144
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 37/167 (22%)
Query: 3 LDPVYYAQI--VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------ 54
L+ Y +++ V G P++++ A D D+ + +I+YK+ + F ID
Sbjct: 108 LEKFYRSRVMAVTEDKGKTPLLRVTARDEDIGQNAQITYKLKG--KKQTFGIDADTGMIY 165
Query: 55 -------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G + +V L V + V ++N P Y Q++EN
Sbjct: 166 AKGLLSVGSYALKVQASDNGKERKKSTARVRLEV-LPVPTSSENPPQFPVAFYQVQLMEN 224
Query: 96 QS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+L + Q +DGD ++ Y ++ G+PE+ FNI+ GS+
Sbjct: 225 CKIGEVLDVYQAEDADGD-----KLWYSLADGDPENQFNINPEYGSI 266
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A N + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSFSGQV 1267
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2277 RAILQVVARDDDQGPNSQLSYVLLGGNEDNAF-VLTASGEL 2316
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + +GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAI 2211
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 2709 IVNGNQESSFTINHATGEI 2727
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID +G T G
Sbjct: 3201 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNMGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3320 GEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQI 3357
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L Y A + E + + +++++ASD D + I Y I GN E F ID S L
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLV 1270
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+D DL + + + + A N + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S++ + I + +GG +V I V+++NDN P L V VEN I Q
Sbjct: 859 QSFYQLKIVA--SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAK 916
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + R+ Y + NP++ F I+ +G++
Sbjct: 917 AVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNI 949
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V I V ++NDNVP + +Y I E+
Sbjct: 2323 DREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAAANAVISYSIIGGN--SQFTINPSTGQI 2419
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 2990 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSL 3049
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q +LI V+I V N + P A I E+ S
Sbjct: 3050 VSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSV 3109
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY I +GN E F I+ +G
Sbjct: 3110 VRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTG 3146
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ ++ Y+I GN ES F I+
Sbjct: 2674 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIR 2731
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2732 PLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPR-FSQIFSAYVSENSPLG 2790
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2791 YTVTRVTTSDEDI 2803
>gi|395817724|ref|XP_003782306.1| PREDICTED: protocadherin Fat 2 [Otolemur garnettii]
Length = 4316
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
QIVE+ S + Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2309 QIVEDGSDVSKFFQINGSTGEMSTVQELDYEA-----QQHFHVKVRAMDKGDPPLTGETL 2363
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P +P Y A + E + ++++ A D D R+ Y I +GN +
Sbjct: 2364 VVVNVSDINDNPPEFREPQYKANVSELATCGHLVLKVQALDPDNRDTSRLEYLILSGNQD 2423
Query: 129 SYFNIDIGSG 138
+F+I+ SG
Sbjct: 2424 RHFSINKSSG 2433
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN +V +AA D D D + Y + AG + F+I+
Sbjct: 1035 VHQGQVQENSPSGTQVVVVAAHDDDSGLDGEVQYFLRAGTGLAAFSINQDTGMIQTLAPL 1094
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V +VNDN P V+Y + E+
Sbjct: 1095 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDVNDNPPQMSRAVFYPSVWEDVPVGTS 1154
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I G L
Sbjct: 1155 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFTIHPSIGLL 1193
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-- 124
+ V IQV++VNDN P+ Y A + EN ++Q A D D D ++SY++SA
Sbjct: 2782 VTVNIQVKDVNDNRPVFEADPYKAVLTENMPVGTSVIQATAIDQDTGRDGQVSYRLSADP 2841
Query: 125 -GNPESYFNIDIGSG 138
N F ID SG
Sbjct: 2842 GSNIHELFAIDSESG 2856
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGS---- 56
DP Y A + EN ++Q A D D D ++SY++SA N F ID S
Sbjct: 2801 DP-YKAVLTENMPVGTSVIQATAIDQDTGRDGQVSYRLSADPGSNIHELFAIDSESGWIT 2859
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2860 TLQELDCETRQTYHFYVVAYDHGQTVQLSSQALVVVSITDENDNPPRFASENYKGSVVEN 2919
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
P+V L D D+ R ++ I+ G+P F I
Sbjct: 2920 SEPGEPVVTLKTLDADISEQNRQVTCYITEGDPLGQFGI 2958
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P + F D +
Sbjct: 2173 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLTLFTTDFKTGVLSVTGP 2229
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY I E P
Sbjct: 2230 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFPQLVYTTSISEGLPAQTP 2289
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2290 VIQLLASDQDSGKNRDVSYQIVEDGSDVSKFFQINGSTGEM 2330
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+Y + E+ ++QL A D D ++++ I++GN +F I L Q+
Sbjct: 1140 VFYPSVWEDVPVGTSVLQLDAWDPDSSSKGKLTFNITSGNHMGFFTIHPSIGLLSTARQL 1199
Query: 66 -------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ V + V ++NDN P+ ++ ++ E S + P
Sbjct: 1200 DRENKDEHILEVTVLDNGEPSLKSTSRVVVCVSDINDNPPVFSHKLFKVRLPERLSPVSP 1259
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +L ASD D + +++Y I + E F+ID +G
Sbjct: 1260 GPVYRLVASDADEGINSKVTYNIEESDEEG-FSIDPVTG 1297
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+V L D D+ R ++ I+ G+P F I +G +
Sbjct: 2912 YKGSVVENSEPGEPVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2971
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P +Y ++ E+ + P
Sbjct: 2972 TLDREHTAKYLLRITASDGKFQASVTVEIFVLDVNDNSPQCSQLLYTGKVRED---VFPG 3028
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ A+D D D + +I+Y + G F +D +G L
Sbjct: 3029 HLILKVFATDLDTDTNGQITYSLH-GPGAQEFKLDPHTGEL 3068
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
++EN P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 723 VLENVPINTPLSRLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVASPLDYEVT 782
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ NDN P Y I E+ I +L
Sbjct: 783 NFYILNVTVFDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDAEVGTTIAELK 842
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + + R+ Y + + P F++ +G L
Sbjct: 843 TEDADSEDNGRVRYTLLS--PTEKFSLHPLTGEL 874
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D R+ Y I +GN + +F+I+ S +
Sbjct: 2380 EPQYKANVSELATCGHLVLKVQALDPDNRDTSRLEYLILSGNQDRHFSINKSSGIISMSN 2439
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ VYI N N P VY A++ EN +
Sbjct: 2440 LCKKQLDPSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHVYEAELAENAKVGTKV 2499
Query: 103 VQLAASDGD 111
++L A D D
Sbjct: 2500 LELLAIDKD 2508
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPM 82
+L A G L +Q + ++ S P+ + +I+ + IV + + +VN++ P
Sbjct: 3266 RLDARTGVLYVNQSLDFETS---PKYFLSIECNRKSSSSLSDTTTIV-VNITDVNEHRPR 3321
Query: 83 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L +Y +++EN I+ ++A+D D + I+Y + GN +F I G L
Sbjct: 3322 FLQGLYSTRVLENAILGDVILTVSATDEDGPQNSAITYSLVGGNQLGHFTIHPKKGEL 3379
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A N + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSFSGQV 1267
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2277 RAILQVVARDDDQGPNSQLSYVLLGGNEDNAF-VLTASGEL 2316
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + +GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAI 2211
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 2709 IVNGNQESSFTINHATGEI 2727
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID +G T G
Sbjct: 3201 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNMGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3320 GEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQI 3357
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L Y A + E + + +++++ASD D + I Y I GN E F ID S L
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLV 1270
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+D DL + + + + A N + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S++ + I + +GG +V I V+++NDN P L V VEN I Q
Sbjct: 859 QSFYQLKIVA--SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAK 916
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + R+ Y + NP++ F I+ +G++
Sbjct: 917 AVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNI 949
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V I V ++NDNVP + +Y I E+
Sbjct: 2323 DREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAAANAVISYSIIGGN--SQFTINPSTGQI 2419
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 2990 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSL 3049
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q +LI V+I V N + P A I E+ S
Sbjct: 3050 VSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSV 3109
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY I +GN E F I+ +G
Sbjct: 3110 VRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTG 3146
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ ++ Y+I GN ES F I+
Sbjct: 2674 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIR 2731
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2732 PLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPR-FSQIFSAYVSENSPLG 2790
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2791 YTVTRVTTSDEDI 2803
>gi|354494436|ref|XP_003509343.1| PREDICTED: cadherin-23 [Cricetulus griseus]
Length = 3233
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 878 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 937
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 938 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 992
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I I SG L
Sbjct: 993 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISSGLL 1038
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 417 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 476
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 477 YSIVNASAFGSYFDISVYEG 496
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1412 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1471
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1472 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNA 1531
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I +GN + F ID +G
Sbjct: 1532 SLITIQALDLDEGPNGTVTYAIVSGNTINTFRIDRHTG 1569
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1377 VASDCGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1436
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1437 GINSVLSYYITEGNEDMTFRMDRISGEIA 1465
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1694 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1753
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1754 ASDADSGCNALLTFNITAGNRERAFFINATTG 1785
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 445 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 504
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 505 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 564
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 565 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 607
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN + F I I S L
Sbjct: 986 YEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISSGLLMRGPRPL 1045
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1046 DRERNSSHVLMVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGT 1105
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y+I +G E F ID +G
Sbjct: 1106 SVIVVRATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 1142
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 774 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGLPRMDFVINSTSGVVRTTAELD 833
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 834 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 893
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 894 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 924
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 26/140 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------------------- 44
Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 1953 YTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPATGVIYVGNATID 2012
Query: 45 --NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
ESY + +D P I+ I + ++ND+ P L+P+ ++E+ I
Sbjct: 2013 REEQESYRLTVVATDRGTVPLSGTAIITILIDDINDSRPEFLNPIQTVSVLESAEPGTVI 2072
Query: 103 VQLAASDGDLDPDQRISYKI 122
+ A D DLDP ++ Y I
Sbjct: 2073 ANVTAIDLDLDP--KLEYHI 2090
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D + +++Y + E
Sbjct: 2374 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGME 2433
Query: 129 SYFNIDIGSG 138
++F +D+ SG
Sbjct: 2434 AFF-VDMDSG 2442
>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
Length = 4958
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V + NDNVP+ +D ++E +++ A+D DL P+ +++ ISAGN
Sbjct: 1275 VYIEVLDENDNVPLFVDDKSRISVLETTPTNTELLRFEATDNDLGPNSELAFAISAGNRR 1334
Query: 129 SYFNIDIGSGSL 140
F ID +G+L
Sbjct: 1335 DTFYIDPLTGTL 1346
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 2155 YSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTISEDGGVIRVAKNLN 2214
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D S++ P V I V ++NDN P+ LD Y A ++EN
Sbjct: 2215 FERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVLDINDNAPVFLDSPYLAHVMEN--- 2271
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 2272 MVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 2318
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L Y A + E ++ + A D D+ P + + SY I GN F +D
Sbjct: 3382 LQTTYDATVSEGAVHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNIGQAFKVDPQTGDIET 3441
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q V+I++ ++NDN P+ P + EN+
Sbjct: 3442 AKQLDRETIPVYDLTIGAIDTGSPPQTGTAAVHIELMDINDNGPIFDPPEVIGYVNENEP 3501
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DL P+ +YK+ G +D +G L
Sbjct: 3502 AGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLDKHTGVL 3545
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+V L + I +N + P + ++ EN+ I+ ++A+DGD P+ I YKI
Sbjct: 3085 DEVSLTLVISGEN--KHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDEGPNGMIRYKI 3142
Query: 123 SAGNPESYFNIDIGSGSL 140
SAGN ++ F + +G++
Sbjct: 3143 SAGNEKNEFFVHSITGAV 3160
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGGP 62
YA + EN + + D D + S +I AGN +F + + GG
Sbjct: 339 YATVDENAVKDSIVAAITVIDNDEGSNGETSVEIRAGNELGHFRLQTAATFDVVRVNGGL 398
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ + Y I V +VND+ P+ Y A + E
Sbjct: 399 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSF 458
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y++ +GN + +F ID +G
Sbjct: 459 VASISATDADSGLNARIYYELDSGNEQGWFAIDQDTG 495
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++VND+ P+ Y + E+ L A+D DL + R+ Y ++ GN E
Sbjct: 956 VRVTVEDVNDHTPVFKLTSYETSLPESTPVNDRFFSLTATDSDLGANGRVLYSVTDGNTE 1015
Query: 129 SYFNI 133
+ F I
Sbjct: 1016 NRFGI 1020
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD + + Y+ G P + F ID S L
Sbjct: 613 YRETLRENVEEGYPILQLRATDGDAPLNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 671
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 672 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 731
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 732 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 777
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1141 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1200
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1201 DREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1260
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1261 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1299
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 1038 YSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 1097
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 1098 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 1157
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 1158 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1192
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 936 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 993
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 994 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 1051
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 1052 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 1088
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1261 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1320
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1321 SAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1378
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1379 DHLFYSFERGNELQLLVVNQTSGEL 1403
>gi|348576082|ref|XP_003473816.1| PREDICTED: cadherin-23-like [Cavia porcellus]
Length = 3354
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 999 MYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITEGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN ++F I + SG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNHFRIHVSSGLL 1159
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A +YF++ + G
Sbjct: 598 YSIVNASAFGTYFDVSVYEG 617
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN ++F I + S L
Sbjct: 1107 YEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNHFRIHVSSGLLMRGPRPL 1166
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1167 DRERNSSHVLTVEAYNHDLGPMRSSVRVIVYVEDVNDEPPVFAQQQYSRLGLRETAGIGT 1226
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + ASD D ++Y+I +G E F ID +G
Sbjct: 1227 SVIVVRASDRDTGDGGLVNYRILSG-AEGKFEIDESTG 1263
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFRINATTG 1906
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A +YF++ +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGTYFDVSVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLHSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGD 111
++ L A+D D
Sbjct: 686 AGATVLFLNATDLD 699
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A D D + ++Y++ G P F I+
Sbjct: 895 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVTYRMQVGRPRMDFLINSSSGVVLTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P +Y + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAMYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITEGNVDGKFSV 1045
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + V +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGRPPRKRDHILQVTVLDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNQDMTFRMDRISGEIA 1586
>gi|395535535|ref|XP_003769780.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Sarcophilus harrisii]
Length = 2694
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLT---- 59
Y + EN ++ + A+DGD P+ I Y++ G P F ID S +
Sbjct: 314 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGPGGPPPEVFEIDPRSGVIRTRG 373
Query: 60 ----------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP V + V++ NDN P + Y Q+ E+ +
Sbjct: 374 PVDREAVESYQLTVEASDQGRDPGPRSATATVCLSVEDDNDNAPQFSEKRYVVQVREDVT 433
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + + Y I +GN F +D +G+L
Sbjct: 434 PGAPVLRVTATDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 476
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ A+D D + + Y I +GN F +D
Sbjct: 424 YVVQVREDVTPGAPVLRVTATDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 483
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 484 YETAKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 543
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ P+ F I+ G+G
Sbjct: 544 VLHIQAIDADAGDNARLEYRLAGVGPDFPFTINNGTG 580
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A F +D G P + + V
Sbjct: 856 IVESTSGIVRTLR------RLDRENVAQYVLRA------FAVDKGVP----PARTPVEVM 899
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 900 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 959
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 960 FQLDIFSGEL 969
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
++ + A D D + R+ Y+++ P+ F I+ G+
Sbjct: 544 VLHIQAIDADAGDNARLEYRLAGVGPDFPFTINNGTGWISVAAELDREEVDFYSFGVEAR 603
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P V + + +VNDN P P Y ++ E+ + +V ++A D D
Sbjct: 604 DHGTPPLTASASVSVTILDVNDNNPTFTQPEYAVRLNEDAAVGTSVVTVSAV--DRDAHS 661
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I+Y+I++GN + F+I SG
Sbjct: 662 VITYQIASGNTRNRFSITSQSG 683
>gi|348514373|ref|XP_003444715.1| PREDICTED: protocadherin gamma-A7-like [Oreochromis niloticus]
Length = 680
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---- 124
VY++V ++NDN P Y AQ+ EN S +P++Q+ A+D D + RISY +
Sbjct: 437 VYLEVSDINDNAPAFSQSHYSAQVTENNSPGVPLLQIRATDLDQGQNARISYFLFEDELN 496
Query: 125 GNPES-YFNIDIGSG 138
GNP S YF+I+ SG
Sbjct: 497 GNPVSAYFSINTESG 511
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 29/110 (26%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA----GNPES-YFNIDIGSDLT-- 59
Y AQ+ EN S +P++Q+ A+D D + RISY + GNP S YF+I+ S +
Sbjct: 456 YSAQVTENNSPGVPLLQIRATDLDQGQNARISYFLFEDELNGNPVSAYFSINTESGVIQS 515
Query: 60 --------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPV 87
GG P V + VQ+ NDN P L PV
Sbjct: 516 LRSLDYEQVKEYKIRVKAQDGGSPPQSSNTSVIVHVQDQNDNPPQILYPV 565
>gi|340722540|ref|XP_003399662.1| PREDICTED: neural-cadherin-like [Bombus terrestris]
Length = 3006
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1335 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1389
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1390 GALDYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLP 1449
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++ + A+DGD D Q I Y ++ NP S F+I+ SG +
Sbjct: 1450 KRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTSGEI 1496
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGS 56
P Y QI E LP ++ + A+DGD D Q I Y ++ NP S F+I+ S
Sbjct: 1434 PTYKTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTS 1493
Query: 57 -----------DLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
D G Q V+ Q ++++NDN P +Y+
Sbjct: 1494 GEIYVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYF 1553
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP + + K+
Sbjct: 1554 GNVTENGTAGMVVMTMTAVDYD-DPSEGTNAKL 1585
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1308 GQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQHTVLTVTAKDH--DESSRIR 1365
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1366 YEITSGNIGGAFAVKNMTGAI 1386
>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
Length = 2617
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 59 TGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T GPD + Y+ V ++V +VNDN P+ Y A ++E + +V+L+ASD D +
Sbjct: 1452 TVGPDVLEAYVKVIVRVSDVNDNPPIFTQTQYSATVLEGNAKGDFVVKLSASDADQGMNS 1511
Query: 117 RISYKISAGNPESYFNID 134
RI Y I GNP++ F I+
Sbjct: 1512 RILYHIVDGNPDNAFTIN 1529
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISA 124
++V I V++VNDN P LD +Y I E+ + + L A D DL + Y I++
Sbjct: 1869 VMVTIIVEDVNDNYPRFLDELYEVSIKEDAPHGMTVAVLRAKDDDLAGSAAATLVYDITS 1928
Query: 125 GNPESYFNIDIGSGSL 140
GN F ++ +G++
Sbjct: 1929 GNDGGRFCVERTTGAV 1944
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--------------- 57
E+ S +P+ A+D D+ P I Y I A N F ID S
Sbjct: 161 ESHSLHVPLYVAYATDPDITPSSPIRY-ILAQNSNDLFGIDAQSGELYLARRLDYETQQR 219
Query: 58 -------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
L G L + ++VQ+VNDN P Y+ ++ E I+Q+ A D
Sbjct: 220 HSLLIRALDGDGYSANLSLSVEVQDVNDNPPRFERNEYHVEVPEGARLDSQILQVTAVDL 279
Query: 111 DLDPDQRISYKISAGNPESYFNIDIG 136
D + R+SY++ G+P N + G
Sbjct: 280 DTGNNARVSYRLQ-GSPAFRINPNTG 304
>gi|110764123|ref|XP_392099.3| PREDICTED: neural-cadherin [Apis mellifera]
Length = 3043
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1360 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1414
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1415 GALDYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLP 1474
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++ + A+DGD D Q I Y ++ NP S F+I+ SG +
Sbjct: 1475 KRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTSGEI 1521
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGS 56
P Y QI E LP ++ + A+DGD D Q I Y ++ NP S F+I+ S
Sbjct: 1459 PTYKTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTS 1518
Query: 57 -----------DLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
D G Q V+ Q ++++NDN P +Y+
Sbjct: 1519 GEIYVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYF 1578
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP + + K+
Sbjct: 1579 GNVTENGTAGMVVMTMTAVDYD-DPSEGTNAKL 1610
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1333 GQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQHTVLTVTAKDH--DESSRIR 1390
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1391 YEITSGNIGGAFAVKNMTGAI 1411
>gi|350418529|ref|XP_003491887.1| PREDICTED: neural-cadherin-like [Bombus impatiens]
Length = 3006
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1335 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1389
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1390 GALDYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLP 1449
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++ + A+DGD D Q I Y ++ NP S F+I+ SG +
Sbjct: 1450 KRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTSGEI 1496
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGS 56
P Y QI E LP ++ + A+DGD D Q I Y ++ NP S F+I+ S
Sbjct: 1434 PTYKTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTS 1493
Query: 57 -----------DLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
D G Q V+ Q ++++NDN P +Y+
Sbjct: 1494 GEIYVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYF 1553
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP + + K+
Sbjct: 1554 GNVTENGTAGMVVMTMTAVDYD-DPSEGTNAKL 1585
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1308 GQPNSVTKFIRIGIADKNDNPPYFDKGLYEAEVDENEDIQHTVLTVTAKDH--DESSRIR 1365
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1366 YEITSGNIGGAFAVKNMTGAI 1386
>gi|426227200|ref|XP_004007709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1, partial [Ovis aries]
Length = 2580
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSDLTGGPDQ 64
Y + E+ ++Q++A+D D P+ R+ Y G+ + +N+ + G P
Sbjct: 635 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGAVYNLRALAVDRGSPVS 694
Query: 65 VYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILPIV-QLAASDGDLDPDQRISYK 121
+ V IQV ++NDN P+ + VE S + +V ++ ASD D P+ +I Y+
Sbjct: 695 LSASVEIQVTVLDINDNPPV-FEKDELELFVEENSPVGSVVARIRASDPDEGPNAQIMYQ 753
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN F +D+ SG L
Sbjct: 754 IVEGNVPEVFQLDLLSGDL 772
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP V+I V++ NDN P + Y Q+ E+ + P++++ A+D D + I Y
Sbjct: 179 GPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHY 238
Query: 121 KISAGNPESYFNI 133
I +GN + + N+
Sbjct: 239 SIVSGNLKGHGNL 251
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 31/147 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ A+D D + I Y I +GN + + N+
Sbjct: 206 YVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGHGNLKGQFYLHSLSGSLD 265
Query: 54 ----------------IGSDLTGGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
I + G P + +V +QV +VNDN P+ + + A ++EN
Sbjct: 266 VINPLDFETIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLEN 325
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 326 VPLGHSVLHIQAVDADAGENARLRYRL 352
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 421 VSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVLTLRAL--DRDANSVITYQLTGGNTR 478
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 479 NRFALSSQSG 488
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y +++ EN ++Q++A+D D + + + I GN + F ID +
Sbjct: 986 YQSRVKENTPAGTQVIQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPD 1045
Query: 57 -------DLT------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
DLT G P D + ++I+ +VND+ P+ Y QI E+
Sbjct: 1046 YENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSPVFSPSNYSKQIPESTVIGS 1103
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A+D D P R+ Y++ +GN + FNID SGS+
Sbjct: 1104 TVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSI 1143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--LTGGP-- 62
Y + EN + ++ +AA D D+ + + Y I +GN E F I+ S +T P
Sbjct: 2025 YIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLD 2084
Query: 63 --------------DQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
D Y V I+V N+ND P Y A + EN +V++
Sbjct: 2085 FEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKV 2144
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+AS D D +SY I G F+ID SG
Sbjct: 2145 SAS--DRDSFGSLSYSIVGGKDSDKFSIDQRSG 2175
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y + EN + + + + A+D D + +ISY I +GN F +D
Sbjct: 1297 LYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPL 1356
Query: 54 ----IGS-DLTGGPDQVYLIVYIQVQNVN-------DNVPMTLDPVYYAQIVENQSGILP 101
I S LT D L+ ++ VN DN P P + I E+
Sbjct: 1357 DRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRF-NISEDSPTGTR 1415
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ QL A+D D+ P+ ++Y I +GN + F +D SG L
Sbjct: 1416 VGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGIL 1454
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 30/165 (18%)
Query: 3 LDPVYYAQIVENQSGILPI----VQLAASDGDLDPDQRISYKISAGNPESY--------- 49
+P YA+ + LPI ++ A+D D + +++Y++S G+ +
Sbjct: 1707 FNPGSYAKSLHEN---LPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLV 1763
Query: 50 -------------FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+++ + + G P Q + + + + ++NDN P Y + EN
Sbjct: 1764 TTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTEN 1823
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+++ ASD D + R++Y I +GN + F ID +G +
Sbjct: 1824 TANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRI 1868
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 60 GGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P + L +V + V +VNDN P +Y + EN + + + + A+D D + +I
Sbjct: 1269 GTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKI 1328
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
SY I +GN F +D +G +
Sbjct: 1329 SYSILSGNENMAFAMDRFTGEI 1350
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E+ + +V + ASD D + + Y ++GN F +D
Sbjct: 881 YTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLD 940
Query: 54 --------IGSDLT--GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+G +T G P D +L+ I V ++NDN P+ Y +++ EN
Sbjct: 941 FEQRSSYALGLSVTDRGSPPLTDTSHLL--INVNDINDNPPVFSPSAYQSRVKENTPAGT 998
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q++A+D D + + + I GN + F ID +G
Sbjct: 999 QVIQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTG 1036
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y QI E+ +V + A+D D P R+ Y++ +GN + FNID + S+L
Sbjct: 1091 YSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELD 1150
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I +Q++NDN P+ P Y ++ E+ S I
Sbjct: 1151 RETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-YVFRVSESSSPGHQI 1209
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q+AA+D D + + Y +S + F+I+ +G
Sbjct: 1210 GQVAATDADDSSNGDVRYALS--DNTDVFSINTSTG 1243
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + NVNDNVP + P I E+ + +V+L A+D D P +++ I GN
Sbjct: 1591 VKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTP---LTFDIVEGNAG 1647
Query: 129 SYFNIDIGSG 138
S F ID SG
Sbjct: 1648 SSFKIDQSSG 1657
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------TGGPDQVYL---- 67
+ QL A D D+ + R+SY + +G+ SYF +D + T QV L
Sbjct: 792 VRQLTAVDLDVGINARLSYSLVSGDT-SYFTVDSQGVIRTKGAFDRETKASYQVALRAQD 850
Query: 68 ----------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
V I++ +VNDN P+ Y A + E+ + +V + ASD D +
Sbjct: 851 GGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNAD 910
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y ++GN F +D +G
Sbjct: 911 LRYSFTSGNTNHAFTLDAVTG 931
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 36/146 (24%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+V+L A+D D P +++ I GN S F ID S L
Sbjct: 1624 VVKLNATDSDGTP---LTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRAT 1680
Query: 59 -TGGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI----VQLAASDGDL 112
TG + VY I+V +VNDN P+ +P YA+ + LPI ++ A+D D
Sbjct: 1681 ETGSQGESVYNNATIRVLDVNDNAPV-FNPGSYAKSLHEN---LPIGQTVAKVTATDRDE 1736
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
+ +++Y++S G+ S F ++ +G
Sbjct: 1737 GENAKVTYELSVGDT-SKFEVNPATG 1761
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ Y + EN + ++ +AA D D+ + + Y I +GN E
Sbjct: 2008 VVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKR 2067
Query: 131 FNIDIGSG 138
F I+ SG
Sbjct: 2068 FKINSTSG 2075
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 25/136 (18%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----------------------T 59
QL A+D D+ P+ ++Y I +GN + F +D S +
Sbjct: 1418 QLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDA 1477
Query: 60 GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P Q + +++ V +VNDN P ++ +I E+ S ++Q+ D D + I
Sbjct: 1478 GSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAI 1537
Query: 119 SYKISAGNPESYFNID 134
+ +S G F ID
Sbjct: 1538 TLSLS-GEGSDNFTID 1552
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD--- 63
Y A + EN +V+++ASD D +SY I G F+ID S + D
Sbjct: 2127 YTASVRENSPTSTSVVKVSASD--RDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLD 2184
Query: 64 ----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+Y I V I++ + NDN P Y + I+EN +
Sbjct: 2185 RELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFS 2244
Query: 103 VQLAASDGDLDPDQRISYKIS 123
+LAA+D D + RI+Y +S
Sbjct: 2245 FKLAATDADEGTNARITYNLS 2265
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VNDN P VY + E+ + + QL A D D+ + R+SY + +G+ SY
Sbjct: 761 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDT-SY 819
Query: 131 FNID 134
F +D
Sbjct: 820 FTVD 823
>gi|338716849|ref|XP_001917733.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Equus caballus]
Length = 3354
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V+I V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTASYTLFLEAIDNGPVGKRRTGTA-----TVFITVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + SG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILQGNHGNNFRIHVSSGLL 1159
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDN P Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNAPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISVYEG 617
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ ASD D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRASDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSILSYYITKGNEDMTFRMDRISGEIA 1586
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ ASD D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRASDRDIGINSILSYYITKGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNTPVFQQPHYEILLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I GN + F I+ SG
Sbjct: 1653 SLITIQALDLDEGPNGTVAYAIVTGNIINTFRINSHSG 1690
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLMVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGMPLLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPISSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFSINATTG 1906
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-- 60
L Y A + E+ IVQL A+D D R+ Y+I GN + F I + S L
Sbjct: 1103 LQSSYEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILQGNHGNNFRIHVSSGLLMRG 1162
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V + V++VND P+ Y + +
Sbjct: 1163 PRSLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETA 1222
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
GI ++ + A+D D ++Y+I +G E F +D +G
Sbjct: 1223 GIGTSVIVVRATDRDTGDGGLVNYRILSG-AEGKFEVDESTG 1263
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + ++Y++ G P F I+
Sbjct: 895 FVAEVLEGTPAGVSIYQVVAIDLDEGLNGLVTYRMQVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
>gi|334331086|ref|XP_003341441.1| PREDICTED: protocadherin-23-like [Monodelphis domestica]
Length = 3395
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
Y V + +Q+VNDNVP+ +Y A + E Q I+Q+ A+D D D + +I Y I +
Sbjct: 2247 TYCKVAVLIQDVNDNVPVFQPSIYQASVAEGQPFNTEIIQVFAADLDSDLNGQIEYSILS 2306
Query: 125 GNPESYFNIDIGSG 138
GN + F ID SG
Sbjct: 2307 GNQDEAFQIDAVSG 2320
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E Q I+Q+ A+D D D + +I Y I +GN + F ID S
Sbjct: 2269 IYQASVAEGQPFNTEIIQVFAADLDSDLNGQIEYSILSGNQDEAFQIDAVSGVIATNTIL 2328
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT V +V IQV ++NDN+P+ L P ++ E+
Sbjct: 2329 DYELTSSYSLVVQAADKGISSLSSTAVVKIQVVDLNDNIPVFL-PSERVEVPESVPLGSV 2387
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I ++AA D D P ++ + GNP + F ID +G++
Sbjct: 2388 ITRVAAHDRDSSPALVFTFS-NGGNPGARFAIDHNTGAV 2425
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
I + SD P + I V + NDN P+ Y+A + E+ IV ++A D D
Sbjct: 2659 IILASDHGHAPLNSTATILIDVLDANDNPPIFSSLEYHAHVKESLPVGSQIVVVSAKDQD 2718
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + + Y I +GN YF ID +G++
Sbjct: 2719 IGANSEVVYTIISGNERGYFCIDGETGAI 2747
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y A I ENQ + ++ A D D + ++ ++I F I+ + L
Sbjct: 1751 LYEATIAENQGPGQYVTKVEAVDRDSGINSQLQFEIMPTAKSGLFKINSSSGEVITAATL 1810
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ + V +V++ ND+ P + P Q++ENQ +
Sbjct: 1811 DRETQEIFTLRVLVKDQGVPPLSSTTTVLCRVRDENDHAPKFIIPSPEVQVLENQEPEV- 1869
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A D D + + Y I GN E +F I+ SG L
Sbjct: 1870 IYTVLAVDMDTGNNGAVQYHIIGGNTEQHFTINETSGEL 1908
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
+G LD + R Y++ + + +D P I+ ++V +VND P
Sbjct: 519 EGPLDRESRSLYEL----------LLVATDSGSPPLSTQEILLLRVTDVNDQAPHFSQER 568
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNP 127
YYA + E + +++L+ASDGD +P R+ Y ++ P
Sbjct: 569 YYASVSEAAAPGTAVLRLSASDGD-EPGTDHARVRYALAQVQP 610
>gi|300794778|ref|NP_001178135.1| cadherin-23 precursor [Bos taurus]
Length = 3354
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNL 1058
Query: 53 DIGSDLT-------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D + T G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSIVQLKATDADEGEFGRVWYRIVHGNHGNNFRIHVSNGLL 1159
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 598 YSIVNASAFGSYFDISVYEG 617
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITGGNEDMTFRMDRVSGEIATRPAPP 1592
Query: 63 DQ-----VYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+V Y+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN S F I+ +G
Sbjct: 1653 SLITIRALDLDEGPNGTVTYAIVAGNIISTFRINRHTG 1690
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITGGNEDMTFRMDRVSGEIA 1586
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + ++
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPISSFVARIL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFSINATTG 1906
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGVVVTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDSDVGLNAELSYFITGGNVDGKFSV 1045
>gi|296472179|tpg|DAA14294.1| TPA: cadherin-23-like [Bos taurus]
Length = 3354
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNL 1058
Query: 53 DIGSDLT-------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D + T G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSIVQLKATDADEGEFGRVWYRIVHGNHGNNFRIHVSNGLL 1159
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 598 YSIVNASAFGSYFDISVYEG 617
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDHDIGINSVLSYYITGGNEDMTFRMDRVSGEIATRPAPP 1592
Query: 63 DQ-----VYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+V Y+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN S F I+ +G
Sbjct: 1653 SLITIRALDLDEGPNGTVTYAIVAGNIISTFRINRHTG 1690
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDHDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITGGNEDMTFRMDRVSGEIA 1586
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + ++
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPISSFVARIL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFSINATTG 1906
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGVVVTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDSDVGLNAELSYFITGGNVDGKFSV 1045
>gi|426256116|ref|XP_004023263.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Ovis aries]
Length = 1397
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 1001 VYNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNL 1060
Query: 53 DIGSDLT-------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D + T G V++ V +VNDN P+ L Y A + E+
Sbjct: 1061 DRETTATYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEG 1120
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1121 HSIVQLKAADADEGEFGRVWYRILHGNQGNNFRIHVSNGLL 1161
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 540 GGSEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 599
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 600 YSIVNASAFGSYFDISVYEG 619
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+AA D D + +SY++ G P F I+
Sbjct: 897 FVAEVLEGTPAGVSVYQVAAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGVVVTTTELD 956
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + IQV +VND P VY + E+ +
Sbjct: 957 RERIAEYQLRVVASDAGTPTKSSTSTLTIQVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1016
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1017 VWLNCTDSDVGLNAELSYFITGGNVDGKFSV 1047
>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor suppressor
homolog 2; Flags: Precursor
gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
Length = 4351
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D D D + Y + AG F+I+
Sbjct: 1036 VYQGQVQENSPAGTQVMVVTAQDDDSGLDGELQYFLRAGTGLEAFSINQDTGMLETLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y + E+
Sbjct: 1096 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN +F + +G L
Sbjct: 1156 VLQLEAWDPDFSSQGKLTFNLTSGNHMGHFIVHPFTGLL 1194
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2276 VYSTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 2336 ELDYEAHQHFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D+ R+ Y I +GN + +F+I+ SG
Sbjct: 2396 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSG 2434
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ +++GN +F + + L Q
Sbjct: 1140 PVFYPSVKEDAPLGTSVLQLEAWDPDFSSQGKLTFNLTSGNHMGHFIVHPFTGLLSTAKQ 1199
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ Y++ V + V +VNDN PM ++ ++ E S +
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLSPLS 1259
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + I+Y I + ES F ID +G
Sbjct: 1260 PEPVYRLVASDPDEGLNGSITYSIEESDEES-FRIDPVTG 1298
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2778 DLVSLVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2837
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2838 LSVEPGSNIHQLFAVDSESG 2857
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D+ R+ Y I +GN + +F+I+ S +
Sbjct: 2381 EPQYEANVSELATCGHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFN 2440
Query: 59 -------------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ + VYI N N P VY A++ EN +
Sbjct: 2441 LCKKQLDSSYNLRVGASDGVFQATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 2501 IELLAIDKDSGPYGTVDYTI 2520
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 2174 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2231 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEM 2331
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P P Y A + + + ++Q+ A D D + + Y G
Sbjct: 1538 FVWVTIHVEDGNLHSPHFTQPRYEANVPDTTTPGTELLQVRAVDADRGANAEVHYSFLKG 1597
Query: 126 NPESYFNID 134
N E +FNID
Sbjct: 1598 NSEGFFNID 1606
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2802 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWIT 2860
Query: 57 ---DLTGGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2861 TLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F+I
Sbjct: 2921 NEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSI 2959
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 3286 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAIVGDVILT 3344
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F ID G L
Sbjct: 3345 VSASDDDGPVNSVITYSLVGGNQLGHFTIDPKKGKL 3380
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y A + + + ++Q+ A D D + + Y GN E +FNID
Sbjct: 1558 PRYEANVPDTTTPGTELLQVRAVDADRGANAEVHYSFLKGNSEGFFNIDSLLGIITVAQR 1617
Query: 54 ------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ ++ G P + L +V + V + + P+ Y+ +I E+
Sbjct: 1618 LDHVHLNRHALTVKAEDQGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGS 1677
Query: 101 PIVQL-AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI+ + AAS D ++Y++ GN S F+++ SG
Sbjct: 1678 PILLISAASSSD------VTYELREGNKNSVFSMNSYSG 1710
>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
Length = 3222
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 27/143 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIG--------- 55
Y A + EN S +++++A+D D ++ Y I AG+P F++ D G
Sbjct: 435 YSAAVSENSSVGASVLRVSATDQDEGASGQVRYSIIAGDPNHDFSVGQDTGVLRVRRSLD 494
Query: 56 -------------SDLTGGPDQVYL---IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G ++ V I V +VNDN P LD Y +VEN +
Sbjct: 495 YERRTRYLLTLQAEDCAGASSELRFDTATVTISVTDVNDNAPAFLDSPYELHVVENAATP 554
Query: 100 LPIVQLAASDGDLDPDQRISYKI 122
+ ++ LAA D D P I Y++
Sbjct: 555 VVLLTLAAHDADQLPSGPIHYRL 577
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK----------ISAGNPESYFNI 52
LD Y +VEN + + ++ LAA D D P I Y+ I+ + E
Sbjct: 539 LDSPYELHVVENAATPVVLLTLAAHDADQLPSGPIHYRLEDLGHGAFRINGTSGELSLER 598
Query: 53 DIGSDL------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +L +G P Q V + V +VNDN P Y A + ENQ
Sbjct: 599 PLDRELRDRYLLTVLAVDSGNPRQTGTGTVSVFVSDVNDNAPEFDRSRYVASLAENQPAD 658
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D+ + RI Y + G S F++D SG
Sbjct: 659 HPVTRITATDADVGRNARIRYSLH-GEQGSRFSVDAESG 696
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSDL--- 58
L P+Y A+I E P++ ++A D D+ P+ + Y I G+P F +D + L
Sbjct: 1702 LQPLYEARISEAAPVGSPVLSVSAVDRDVRPNNHQFFYSILEGDPNKVFGVDSQTGLLHT 1761
Query: 59 --------------------TGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P Q V + + +VNDN P ++E++
Sbjct: 1762 AAPLDRESVPSYTLTLAAIDRGSPPQTGTATVRVTLDDVNDNGPEFEPADLLGYVLEDEP 1821
Query: 98 GILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSGSL 140
++ LAA D DL P+ +Y + G + F +D +G L
Sbjct: 1822 PYTSVLTLAARDRDLAPNGAPFAYSLVGGARRNLFELDRQTGVL 1865
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 29/154 (18%)
Query: 16 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-QV 65
+G+ P+ L+A+ P RI+Y++++G + D G DL P Q+
Sbjct: 869 NGVAPLATLSATSPKKGPAGRITYRVASGGNAFALHPDSGVLTVIRGDALDLEATPRLQL 928
Query: 66 YL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+L + +Q+ +VNDNVP VY + E QS + QL A DGD
Sbjct: 929 WLEARDADEPALSSAVRIDVQLTDVNDNVPEFERDVYNTSVREEQSAGQLVAQLHARDGD 988
Query: 112 LDPDQRISYKI-----SAGNPESYFNIDIGSGSL 140
+ ++ Y++ S + F ID +G L
Sbjct: 989 SGVNGKLRYELRPLPTSRDFDDLPFEIDAATGEL 1022
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
VY+ V ++NDN P+ DP+ Y+ +++EN + +++++A+D D + RI Y I+ G+P
Sbjct: 208 VYVNVLDLNDNAPL-FDPMSYSDEVLENVTVGSSLLRVSATDLDSGDNGRIVYSIAEGDP 266
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V Y+ E+ + P+ L G LD +QR SY++ + + + S
Sbjct: 363 VEYSVSPEHTFSLGPVDGLLRVRGLLDREQRASYELLVTARDRGHPVRVASQR------- 415
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ +++ + NDN P+ Y A + EN S +++++A+D D ++ Y I AG
Sbjct: 416 ---LRVRLLDENDNSPVFDPRQYSAAVSENSSVGASVLRVSATDQDEGASGQVRYSIIAG 472
Query: 126 NPESYFNIDIGSGSL 140
+P F++ +G L
Sbjct: 473 DPNHDFSVGQDTGVL 487
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNP 127
V + +Q+ ND P+ L P+Y A+I E P++ ++A D D+ P + + Y I G+P
Sbjct: 1688 VVVSIQDGNDP-PVFLQPLYEARISEAAPVGSPVLSVSAVDRDVRPNNHQFFYSILEGDP 1746
Query: 128 ESYFNIDIGSGSL 140
F +D +G L
Sbjct: 1747 NKVFGVDSQTGLL 1759
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
++ + EN ++Q+ +SD D + +Y + NP F ID G+ GP
Sbjct: 1073 LFSVNVTENAPLGAFVIQVTSSDRDAAENANATYSFTE-NPGERFAIDPLTGNVTVAGPL 1131
Query: 63 -----DQVYLIV-------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
D+ L V + +Q+VNDN P Y ++ E QSG + +
Sbjct: 1132 DRELRDEYLLKVAAVDGSWKAETPLTVSLQDVNDNAPRFERMAYRFRLPELQSGGSFVGR 1191
Query: 105 LAASDGD-LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+AA+D D P+ +SY + P F +D +G +
Sbjct: 1192 VAATDADKTGPNAAVSYSLR--RPSDLFRVDPATGEV 1226
>gi|198437132|ref|XP_002124366.1| PREDICTED: similar to KIAA0279 protein [Ciona intestinalis]
Length = 2808
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 21 IVQLAASDGD-LDPDQRISYKI-SAGNP----------------------ESYFNIDIGS 56
I+Q+ A DGD L RI+Y I + G+P + + + +
Sbjct: 557 ILQVEAEDGDALRSSSRIAYTILNRGSPVPFRIDLQNGTIQLSQKLDHERQGSYTFTVQA 616
Query: 57 DLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + V I V++VNDN P Y ++ E+ + PI+ + A D D D
Sbjct: 617 SDHGSPRRTATTQVTINVRDVNDNAPYFTSNSYQKRVAEDMALKSPIINIEARDPDTDAT 676
Query: 116 QRISYKISAGNPESYFNI 133
ISY+I AGN + F+I
Sbjct: 677 ISISYRIIAGNQDRKFSI 694
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY---------KISAGNPE----S 48
+P YY + EN +VQ+ A DGD+ + RI+Y +I++ N E
Sbjct: 748 FEPNYYPVTLPENVPIGHLVVQVHAVDGDIGDNARITYCFSDAVSNFQINSNNGEIRTRQ 807
Query: 49 YFNIDIGSDLTGG---------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ D S + G P++ +V I + ++NDN P+ Y ++ E+
Sbjct: 808 KLDFDNLSKIMLGVIARDNGIPPEEDRAVVEISLTDINDNAPVFQQTKYQGEVSEDSRVS 867
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSGSL 140
++ + A+D D + I Y GN YF++D SG +
Sbjct: 868 QRVLTIHATDRDSSNNGEIRYTFEGGNNGNGYFSVDPHSGDI 909
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------NPES------------ 48
Y ++ EN I ++A+D D + +SY + +G NP++
Sbjct: 439 YNVRVYENARVNSIIANISATDADSGMNGLVSYVLYSGRRTFRINPQTGEISLIARLDYE 498
Query: 49 ---YFNIDIGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ + + + G P +V +QV ++NDN P + Y ++E+ I+
Sbjct: 499 VTKRYQLRVRATDNGRPALSNTSGLVNVQVLDINDNTPHFISSPYNKVVLESAPVGSKIL 558
Query: 104 QLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ A DGD L RI+Y I F ID+ +G++
Sbjct: 559 QVEAEDGDALRSSSRIAYTILNRGSPVPFRIDLQNGTI 596
>gi|196012451|ref|XP_002116088.1| hypothetical protein TRIADDRAFT_10055 [Trichoplax adhaerens]
gi|190581411|gb|EDV21488.1| hypothetical protein TRIADDRAFT_10055 [Trichoplax adhaerens]
Length = 1027
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------IGSD 57
P+Y I EN + + ++A D D PD +I Y+I S N + F ID I +
Sbjct: 871 PIY---IAENATVTTVLTSVSAQDNDTGPDSQIRYRIASQSNSQGVFKIDQNGHISIAKE 927
Query: 58 L----------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI- 99
L +G P +IVY+ V ++NDN P+ DP Y + + +
Sbjct: 928 LDREKTSHYNLTILAMDSGSPVLNTTIIVYVVVTDINDNKPI-FDPSSYTITLTSTTPTG 986
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A+D D P+ +SYK+ + ++F+ID +G +
Sbjct: 987 SSVVTVKATDADRAPNSILSYKLVSNAISNHFSIDSTTGQI 1027
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L +Y +I E + + A D D+ P + + SY I GN E F ID
Sbjct: 1728 LQTLYEVEISEGAPVGSKVTAVKAVDKDVRPQNNQFSYSIIGGNIEQAFKIDPQSGQIET 1787
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+G TG P Q V I + ++NDN P T DP +++EN+
Sbjct: 1788 ARFLDRETTPEYSLVVGGIDTGLPPQTGTTTVKIHITDINDNGP-TFDPRVVGKVLENEP 1846
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
I+ L+A D DL P+ +YK+ G + ID SG
Sbjct: 1847 PNTKIMTLSAKDPDLPPNGAPFTYKLIGGKHRDFVKIDKHSG 1888
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 29/165 (17%)
Query: 5 PVYYA---QIV--ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------ 53
PV+ A Q++ EN+ I+ + ASD D P+ I YKIS GN F +D
Sbjct: 1410 PVFTALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGNERKEFAVDPYSGAV 1469
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
DL P ++ I + ++NDN P +Y A I EN
Sbjct: 1470 TILQPLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISEN 1529
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + I Y IS G + F ID +G +
Sbjct: 1530 LPPNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRV 1574
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
L VY V ++NDN P+ DP+ Y +I EN S PIV ++A+D D + +I ++I+AG
Sbjct: 232 LTVYCNVLDLNDNTPL-FDPMSYTNEIFENVSIATPIVTVSATDLDSGDNGKIVFRITAG 290
Query: 126 NPESYFNI 133
+ F +
Sbjct: 291 DENGDFEM 298
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------DIGSDLT 59
Y A I EN S ++Q++A+D D + R+ Y I++G+ F+I + +L
Sbjct: 465 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLN 524
Query: 60 GGPDQVYLI----------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
Y++ + I V ++NDN P LD Y A ++EN
Sbjct: 525 YERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLAYVMENT- 583
Query: 98 GILP----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
I P ++ + A D D P + + Y I G P++ F I+ +G +
Sbjct: 584 -IPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDT-FKINASTGEI 629
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D R+S +I +Y D P + +++++ + NDN P+ DP
Sbjct: 406 GPVDGLLRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPV-FDPKQ 464
Query: 89 Y-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y A I EN S ++Q++A+D D + R+ Y I++G+ F+I +G
Sbjct: 465 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTG 515
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
Query: 3 LDPVYYAQIVENQSGILP----IVQLAASDGDLDP-DQRISYKISAGNPESY-------- 49
LD Y A ++EN I P ++ + A D D P + + Y I G P+++
Sbjct: 571 LDSPYLAYVMENT--IPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKINASTGE 628
Query: 50 --------------FNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+ + +G+ TG P V I VQ+VND+ P Y+A I E
Sbjct: 629 ISLLRALDREAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSYHATINE 688
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
N +V A+D D+ + +I Y + G+ F ID +G
Sbjct: 689 NSPLSTWVVTPTATDKDIGLNAKIRYSL-LGDKVDRFKIDQDAG 731
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 15 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPDQVYLIVYI 71
Q G L + A D + I+Y I GN F ID + LT ++ +
Sbjct: 1321 QEGQLLLKVTAKDKLDFGVNAEINYVIVGGNGSENFAIDKYNGWITLTKPVTEIGQEYLL 1380
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILP--------------------IVQLAASDGD 111
+V+ ++ VP D V +V ++ +P I+ + ASD D
Sbjct: 1381 RVRAIDKGVPPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNASDDD 1440
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ I YKIS GN F +D SG++
Sbjct: 1441 QGPNGMIRYKISGGNERKEFAVDPYSGAV 1469
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--GGP 62
++ + EN ++Q+ +SD D+ + +Y + NP F ID I ++T G
Sbjct: 1099 LFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSFTE-NPGEKFKIDPISGNVTVVGHL 1157
Query: 63 DQV----YLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
D+ YL+ + I +Q+ NDN P Y E Q ++ + Q
Sbjct: 1158 DREQQDEYLLKVAAVDGAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQRDVVFVGQ 1217
Query: 105 LAASDGDLD-PDQRISYKISAGNPESYFNIDIGSGSL 140
+AA+D D P+ ISY + P F +D SG +
Sbjct: 1218 VAATDRDKQGPNSVISYSLQ--QPSDLFTVDPASGDI 1252
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + L + I V + NDN P+ +Y A I+E +S +V+++A D D + +++YK
Sbjct: 971 PLRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYK 1030
Query: 122 ISAGNPESYFNIDIGSGSL 140
++ + + F ID SG +
Sbjct: 1031 LT-DDFDGTFEIDSESGEI 1048
>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
Length = 4343
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + AG + F+I D G T P
Sbjct: 1032 VHQGQVQENSPSGTSVMVVAAHDDDTGLDGELQYFLRAGTSLAAFSINQDTGMIQTLAPL 1091
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y + VYI+V +VNDN P PV+Y + E+
Sbjct: 1092 DREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPSVREDAPLHTS 1151
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++QL A D D ++++ I++GN +F + +G L
Sbjct: 1152 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFVLHPLTGLLA 1191
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2272 VYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2331
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2332 ELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2391
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2392 HLVLKVQALDPDSRDTSRLEYLILSGNQDRHF 2423
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D ++SY++ N F ID +
Sbjct: 2798 DP-YKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAIDSETGWIT 2856
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L +Q+Y ++V + + + NDN P Y +VEN
Sbjct: 2857 TLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSITDENDNAPRFASEDYRGSVVEN 2916
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
P+ L D D+ R ++ I+ G+P F I
Sbjct: 2917 SEPGEPVATLKTLDADISEQNRQVTCYITEGDPLGQFGI 2955
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2170 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2286
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2287 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2327
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
I+E+ P+ LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 720 ILESAPLNTPLAHLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEAT 779
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ NDN P Y I E+ +V+L
Sbjct: 780 SFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISEDTEVGTTVVELK 839
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R+ Y + + P F++ +G +
Sbjct: 840 AKDVDSEDNGRVRYALLS--PTEKFSLHPLTGEI 871
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2781 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGS 2840
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2841 NIHELFAIDSETG 2853
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 46 PESYFNI---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P FNI D GS + P +I I V+NVND P LD +Y I++ + +
Sbjct: 1830 PSFRFNIYVHDQGSPILFAPRAAQVI--INVRNVNDCPPRFLDQIYEVAIMKPVHRGMAL 1887
Query: 103 VQLAASDGDLDPDQRISYKISAGN 126
+ + ASD D +SY I GN
Sbjct: 1888 LTVQASDD----DSEVSYSIKTGN 1907
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ R ++ I+ G+P F I +G +
Sbjct: 2909 YRGSVVENSEPGEPVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2968
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V I V ++NDN P +Y ++ E+ I
Sbjct: 2969 TLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCSQLLYAGEVSEDVPPGHFI 3028
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3029 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGEL 3065
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------- 50
P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2378 PQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINSSSGIISMYNL 2437
Query: 51 ---NIDIGSDL-TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++D +L G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2438 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHIYEAELAENAKVGTKVI 2497
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2498 ELLAIDKDSGPYGTVDYTI 2516
>gi|431918060|gb|ELK17288.1| Protocadherin Fat 2 [Pteropus alecto]
Length = 4424
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPPGTQVMVVAAHDDDSGLDGELQYFLRAGTSLTAFSINQDTGLIQTLTPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V +VNDN P PV+Y + E+
Sbjct: 1096 DREFVSCYWLTVLAVDRGSIPLSAVTEVYIEVMDVNDNPPRMSRPVFYPSVREDAPLHTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++QL A D D +++++ I++GN +F I
Sbjct: 1156 VLQLDAWDLDSSSKEKLTFNITSGNHMGFFVI 1187
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F ID +
Sbjct: 2248 PYYKVRVPENITLYTPILHTQARSPE---GHRLIYNIVEEEPLMLFTIDFKTGVLTVTGP 2304
Query: 57 -DLTGGPDQVYL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ IV + V++VNDN P VY + E P
Sbjct: 2305 LDYESKTKHVFTVRATDTALGSFSVAIVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTP 2364
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2365 VIQLLASDQDSGQNRDVSYQIIEDGSDVSKFFQINGSTGEM 2405
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ R ++ I+ G+P F I +G +
Sbjct: 2987 YRGSVVENSEPGEPVATLKTFDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 3046
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G QV +IV I V ++NDN P +Y ++ E+ + I
Sbjct: 3047 TLDREDMAKYLLRITASDGKFQVAVIVEIFVLDINDNSPQCSQLLYTGKVSEDIAPGHFI 3106
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3107 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGEL 3143
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 734 LAHLAATDSDTGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYETTSFYILNVTVY 793
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P+ Y I E+ I +L A D D D +
Sbjct: 794 DLGTPQKSSWKLLTVNVKDWNDNAPIFPPGGYQVTISEDIEVGTTIAELKAKDADSDDNG 853
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 854 RVHYTLLS--PTEKFSLHPLTGEL 875
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 4 DPVYYAQIV-----ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
DPV Y+ + N+ G+ L + G L + + Y+ + ++ ID+ +
Sbjct: 2795 DPVIYSLVKGTTPESNRDGVF---SLDRNTGALKVRKAMDYEST-----KWYQIDLMAHC 2846
Query: 59 TGGPDQVYLI----VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ YL+ V IQV++VNDN P+ Y A + EN ++Q+ A+D D
Sbjct: 2847 PH--NDTYLVSLVTVNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGN 2904
Query: 115 DQRISYKISA---GNPESYFNIDIGSG 138
D ++SY++ N F ID +G
Sbjct: 2905 DGQVSYRLPVDPDSNIHELFAIDSETG 2931
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D ++SY++ N F ID +
Sbjct: 2876 DP-YKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDPDSNIHELFAIDSETGWIT 2934
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y ++V + + + NDN P Y +VEN
Sbjct: 2935 TLQELDCETRQTYHFYVMAYDNGQTIQLSSQVLVEVSITDENDNAPQFASEDYRGSVVEN 2994
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
P+ L D D+ R ++ I+ G+P F I
Sbjct: 2995 SEPGEPVATLKTFDADISEQNRQVTCYITEGDPLGQFGI 3033
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D ++ +SY+I S G
Sbjct: 2350 VYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYQIIEDGSDVSKFFQINGSTGEMSTVK 2409
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2410 ELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVGVSDINDNPPEFRQPQYEANVSELATCG 2469
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D + Y I +GN + +F
Sbjct: 2470 HLVLKVQALDPDSMDTPHLEYLILSGNQDRHF 2501
>gi|339241777|ref|XP_003376814.1| putative cadherin domain protein [Trichinella spiralis]
gi|316974454|gb|EFV57941.1| putative cadherin domain protein [Trichinella spiralis]
Length = 4414
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V++ NDN P+ P+Y A +VEN IVQL A+D D ++Y I GN +
Sbjct: 919 VFVAVKDRNDNAPVPARPLYEADVVENSPPGTSIVQLNATDFDEPRSPTLTYSIREGNAQ 978
Query: 129 SYFNIDIGSG 138
S F I+ +G
Sbjct: 979 SLFQIEPNTG 988
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
N F + DL ++++++ V +VNDN P+ PVY + E+++ P +
Sbjct: 2915 NRRHLFYLRSDEDLCPLCERMFVV---NVIDVNDNEPLFKRPVYETSVQEHENVTYPAFV 2971
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VQ+ A D D P R+ Y++ + + + F+ID SG L
Sbjct: 2972 VQVHAVDRDFGPAGRVRYRLQS-DWDGLFSIDENSGVL 3008
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
P+Y A +VEN IVQL A+D D ++Y I GN +S F I+
Sbjct: 936 PLYEADVVENSPPGTSIVQLNATDFDEPRSPTLTYSIREGNAQSLFQIE 984
>gi|291231659|ref|XP_002735777.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 3815
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++ NDN P+ VY A+ +E+ +V LA SD DL + +SY
Sbjct: 2387 GPKYADVTITVYVEDANDNYPIFTPTVYNAEWLEDTQIGTTLVTLACSDNDLGVNSDLSY 2446
Query: 121 KISAGNPESYFNID-IGSG 138
+I+AGN E F ++ GSG
Sbjct: 2447 QITAGNDEGKFTLESTGSG 2465
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 42/173 (24%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A+ +E+ +V LA SD DL + +SY+I+AGN E F ++
Sbjct: 2413 VYNAEWLEDTQIGTTLVTLACSDNDLGVNSDLSYQITAGNDEGKFTLESTGSGVRILLQQ 2472
Query: 54 -----------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+G+ L D +V I V VN+ P +P Y+
Sbjct: 2473 ILDIENTAQYTLTVTAYDSGVDGVGNSLALSGDA---MVTINVLPVNEYTPY-FNPASYS 2528
Query: 91 QI-VENQSGILPIV-QLAASDGDL-DPDQRISYKISAGNPESYFNIDIGSGSL 140
I VE ++ I +V Q+ A+DGD+ D + + I++GN E+ + ID +G +
Sbjct: 2529 TINVEERTTIDTVVGQVFAADGDIGDYHAFLRFSIASGNEENKWAIDEVTGEI 2581
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--PESY-FNIDIGSDLTGGP 62
VY + EN I Q+ ASD D+D + +S+ I G+ P + N D L P
Sbjct: 2957 VYVVNVRENLPNDTVIYQVRASDADIDNNALLSFAIINGDDIPSKFAINDDGEVSLVVSP 3016
Query: 63 DQVYLIVYIQVQNV---------------------NDNVPMTLDPVYYAQIVENQSGILP 101
D+ YI V NDN P+ Y+ I E+ +
Sbjct: 3017 DREDQETYILTLEVSDNGTVTRTDTASFTVNFIDENDNAPVFSSDPYHIDIEESVAIGTT 3076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + ++D D D ++ ISY+I +GN F ID G
Sbjct: 3077 ILHVQSTDADKDINRLISYRIVSGNQAGSFRIDQALG 3113
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNID---------IGSDLTGGPDQVYLIVY------ 70
A+D D+D + ISY I G+ + F+ID I + ++ YL++
Sbjct: 2871 ATDADIDENSEISYAIVGGDGWAAFSIDPPSGKIRTAISTLDRERKERYYLMITATDGGT 2930
Query: 71 ----------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
+ V ++NDN PM VY + EN I Q+ ASD D+D + +S+
Sbjct: 2931 PALSTLKGLIVWVNDLNDNDPMFTPNVYVVNVRENLPNDTVIYQVRASDADIDNNALLSF 2990
Query: 121 KISAGN 126
I G+
Sbjct: 2991 AIINGD 2996
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 29/158 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESYFNID----- 53
T D Y +I E+ + L + Q+ A+D D D RI Y I GN E F ID
Sbjct: 1955 FTDDGSYNFRIDEDAALALDVGQVIATDSDDSDYEDGRIVYSIIDGNDEDRFYIDSTSGW 2014
Query: 54 -------------------IGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQI 92
G D P +Y IV I + +VNDNVP +Y Q+
Sbjct: 2015 IKVKQSVDRESTDYYRLTIRGIDEGTIPHALYSDAIVDIYIDDVNDNVPFCDPTIYATQL 2074
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPES 129
EN + + + SD D +++++Y I++G NP +
Sbjct: 2075 YENVGSSVTVAIVLCSDEDDGVNEQLNYAITSGDNPST 2112
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 45 NPESYFNIDIGSDLTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
N Y NI + D D ++++ + +++VNDN P+ + + EN
Sbjct: 2807 NDTHYLNITVMDDGINENDTFVDFMLLTVVIEDVNDNYPLFPSDLNEIYVDENVPSGYHF 2866
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D+D + ISY I G+ + F+ID SG +
Sbjct: 2867 FTVQATDADIDENSEISYAIVGGDGWAAFSIDPPSGKI 2904
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 24 LAASDGDLDPDQRISYKIS---AGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
L + G L+P R++ I +SY + D G +V +++ +N++
Sbjct: 557 LPVTTGTLNPSVRLTTSIDYDDVAEAQSYTLVIRARDNNGAGLSGTAVVQVEITGINEDT 616
Query: 81 PMTLDP-VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P ++P I E S +V + A DGD D +SY + +G+ F ID SG
Sbjct: 617 PTFINPDPNPVSIPEQLSVGTSVVTIHADDGDRGTDGEVSYLLISGDTHESFEIDPSSG 675
>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 4768
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 7 YYAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNI-----DIGSD 57
+YA + EN + +P++ L+A D D P+ +++Y + G+ S F I +I +
Sbjct: 2086 FYALVRENMASSPPVPVITLSAVDLDSAPNSQLTYVLREGDKGVTSLFQINSVSGEITCN 2145
Query: 58 LTGGPDQV--YLI-----------------VYIQVQNVNDNVPM-TLDPVYYAQIVENQS 97
T +QV Y + +YI+V++VNDN PM Y + ENQ
Sbjct: 2146 QTLDREQVPQYKVLVVAIDSGSERLTGTGTIYIEVEDVNDNAPMFDRSSTYVGHVQENQP 2205
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
G I+ + A+D D P+ +ISY + + + F I+ SG L
Sbjct: 2206 GPTDILTVTATDNDSGPNAQISYSL-LDDVDGRFAINTTSGIL 2247
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGP 62
+Y + EN + + ++ A+D D+D + ++Y I GN + FNI+ G+ L G
Sbjct: 1209 IYRTSVKENLAKYSFVYKVTATDLDVDENAALTYDIIDGNTDDMFNINPGTGQISLNGNL 1268
Query: 63 DQ----------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D +V I V +VNDN P+ VY I E+
Sbjct: 1269 DTETQDLYSLQIQAADNGKSTTFTASAMVIISVLDVNDNTPLFHLTVYEVNIREDAKLGE 1328
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A D DL + I Y +S + F +D +G+L
Sbjct: 1329 KLIQVTADDTDLGINAEIEYSLSES--DGTFVLDSHNGNL 1366
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
F++ I + G P Q ++VY+ V++VNDN P Y Q++EN + ++ + A+
Sbjct: 1733 FSLTILASDKGSPSQSTSVLVYLNVKDVNDNEPQFNHQSYAGQVLENAAVGTVVLTVQAT 1792
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + ++ Y + GN S F I +G++
Sbjct: 1793 DIDSGINGQLKYSLLEGNSSSDFGIGTDNGTI 1824
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRIS 119
G D V I V++ ND P+ +Y A I+EN +G + + + A+D D P D++ S
Sbjct: 3231 GNDTDTCTVTISVEDAND-APVFTQSLYQASILENSAGGVTVTTVTANDRDNMPEDRQFS 3289
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y+I G E F+ID +G +
Sbjct: 3290 YRILRGGEE--FSIDSTNGRI 3308
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 5 PVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------- 56
P Y++ V I ++Q+ A+D D + + + I++G+ + F++D S
Sbjct: 1978 PSVYSKTVREDVKIGTTLLQVTATDSDSGLNGVVRFFITSGDDNADFSMDPSSGVLRVQK 2037
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ P V I +Q+VND P+ + +YA + EN +
Sbjct: 2038 NLDYERVNKYTLTIQAEDMGVSPRYSVASVTITIQDVNDFQPVFQNSPFYALVRENMASS 2097
Query: 100 --LPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
+P++ L+A D D P+ +++Y + G+ S F I+ SG +
Sbjct: 2098 PPVPVITLSAVDLDSAPNSQLTYVLREGDKGVTSLFQINSVSGEI 2142
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 21 IVQLAASDGDL-DPDQRISYKISAGNPESYFNIDIGSDLTG--------GPDQVYL---- 67
+ ++ A+D D P+ ++SY I GNP F I+ + + P +YL
Sbjct: 2949 VARVTATDQDSPGPNGKVSYYILGGNPGGVFQINSENGVISVAKALDYDSPTNIYLLNVS 3008
Query: 68 -------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
I+ +Q+ +VNDN P+ + + EN I+++ A D D
Sbjct: 3009 ARDSALHYKEATVILTVQLTDVNDNPPLFTQSHFEGFVPENSPSDTSIIKVQARDIDTGD 3068
Query: 115 DQRISYKISAGNPE----SYFNIDIGSGSL 140
+ RI Y IS + + F I+ +G+L
Sbjct: 3069 NARIEYYISESGSDQLALTLFKINKDTGTL 3098
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D V +Y+ QN DN P +Y + EN + + ++ A+D D+D + ++Y I
Sbjct: 1187 DSVTARIYVLDQN--DNPPHFDRDIYRTSVKENLAKYSFVYKVTATDLDVDENAALTYDI 1244
Query: 123 SAGNPESYFNIDIGSGSL 140
GN + FNI+ G+G +
Sbjct: 1245 IDGNTDDMFNINPGTGQI 1262
>gi|189237687|ref|XP_969192.2| PREDICTED: similar to Neural-cadherin precursor (Cadherin-N protein)
(DN-cadherin) [Tribolium castaneum]
Length = 3035
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1338 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1392
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1393 GALDYETRKRYELRLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1452
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++++ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1453 KSVLRVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1499
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++++ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1437 PTYRTQITEEDDRNLPKSVLRVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1496
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P +Y
Sbjct: 1497 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNPPTFPQGIYL 1556
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP + R+ Y I
Sbjct: 1557 GNVTENGTAGMVVMTMTAVDYD-DPSEGTNARLVYSIEK 1594
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI Y+
Sbjct: 1313 PNSVTKFIRIGIADKNDNPPYFDKALYEAEVDENEDIQHTVLTVTAKDH--DESSRIRYE 1370
Query: 122 ISAGNPESYFNIDIGSGSL 140
I++GN F + +G++
Sbjct: 1371 ITSGNIGGAFAVKNMTGAI 1389
>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oryzias latipes]
Length = 3810
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSDLTG--- 60
Y I EN PI+QL A D D + I Y+ +A F ID S L
Sbjct: 916 YRETIRENVEEGYPILQLRAKDSDSPSNANIRYRFVGDTAVMARVAFEIDPRSGLITTRG 975
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V + NDNVP + Y + E+
Sbjct: 976 SVDRESNEHYTLHVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKEDVR 1035
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + + Y I +GN F+ID +G +
Sbjct: 1036 PHSEILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEI 1078
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS----- 56
L P Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 1438 LSPRYQGTVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRT 1497
Query: 57 ------------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+LT P + + + + V +VNDN P+ + + EN +
Sbjct: 1498 VRRLDRESVPFYELTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVFPADDFEVLVKENSA 1557
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + +I Y+I GN F +DI SG L
Sbjct: 1558 VGSVVSQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 1600
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + E+Q +V ++A+D D+ + RI+Y + P+ F ID
Sbjct: 1339 YSVSVNEDQPPGSTVVVISATDDDVGENARITYFLEDNIPQ--FRIDPATGAITLQAELD 1396
Query: 54 ----------IGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
I + G P D Y V + V +VNDN P L P Y + E+
Sbjct: 1397 YEDQMTYTLAITAKDNGIPQKSDTTY--VEVNVNDVNDNSPQFLSPRYQGTVSEDAPPFT 1454
Query: 101 PIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++Q++A+D D + R+ Y G + + F I+ SG
Sbjct: 1455 SVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1493
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYL------ 67
I++++A+D D D + + Y I +GN F+ID + + L ++ Y
Sbjct: 1040 ILRVSATDRDKDSNAAVHYNIISGNSRGQFSIDSVTGEIQVVAPLDYESEREYTLRVRAQ 1099
Query: 68 ------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
IV +QV +VNDN P+ + + A ++E+ I+ + A D D +
Sbjct: 1100 DNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASVLESAPVGSSILHIQAIDTDSGDN 1159
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
R+ Y+++ ++ F I+ +G
Sbjct: 1160 ARLEYRLTGTGSDTPFIINSATG 1182
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
+ A ++E+ I+ + A D D + R+ Y+++ ++ F I+ +
Sbjct: 1132 FQASVLESAPVGSSILHIQAIDTDSGDNARLEYRLTGTGSDTPFIINSATGWVTVSSILD 1191
Query: 57 --------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D P V I V +VNDN P L YY ++ E+ + +
Sbjct: 1192 RESVEHYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEYYGRLNEDAAVGTSV 1251
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
V + A D D+ + ++Y+I+ GN + F I G+
Sbjct: 1252 VTVTAVDRDV--NSAVTYQITGGNTRNRFAISTAGGA 1286
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 5 PVYYAQ----IVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--- 56
PV+ A +V+ S + +V Q+ A+D D + +I Y+I GN F +DI S
Sbjct: 1541 PVFPADDFEVLVKENSAVGSVVSQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGEL 1600
Query: 57 ----DLTGGPDQVYLIVY--------------IQVQNVNDNVPMTLD-PVYYAQIVENQS 97
DL Y+IV I++ + NDN P D + + V N+S
Sbjct: 1601 TSLIDLDYEARNEYVIVVQATSAPLVSRATVRIRLVDQNDNRPTLQDFHIIFNNFVSNRS 1660
Query: 98 GILP---IVQLAASDGDLDPDQRISYKISAGN 126
P I ++ A D D+ R+ Y I GN
Sbjct: 1661 NSFPSGVIGRVPAHDPDV--SDRLYYTIDRGN 1690
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F +++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNVQSG 743
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F IDI SG +
Sbjct: 1256 RQFAIDITSGQVA 1268
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPVFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ FNI+ +G +
Sbjct: 2707 IVNGNMENSFNINHATGEI 2725
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F IDI S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ FNI+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSAVDKDSGPNGQLDYEIVNGNMENSFNINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSPLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDI 2801
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F +++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNVQSG 743
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F IDI SG +
Sbjct: 1256 RQFAIDITSGQVA 1268
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ FNI+ +G +
Sbjct: 2707 IVNGNMENSFNINHATGEI 2725
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F IDI S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F +D +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVVDPNTG 3248
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------F 50
Y+ ++EN ++ L A+D D + I+Y + + + + + F
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQGFLDF 3258
Query: 51 NIDIGSDLT----GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
LT PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3259 ETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVG 3318
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3319 EVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ FNI+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSAVDKDSGPNGQLDYEIVNGNMENSFNINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSPLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDI 2801
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A N + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 18/136 (13%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY---------------- 66
+++A D D P+ +S +S G S D S + V+
Sbjct: 1121 KVSAVDKDFGPNGEVSCTLSLGEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLK 1180
Query: 67 --LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I
Sbjct: 1181 DQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILK 1240
Query: 125 GNPESYFNIDIGSGSL 140
GN E F ID SG +
Sbjct: 1241 GNEERQFAIDSFSGQV 1256
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L Y A + E + + +++++ASD D + I Y I GN E F ID S L
Sbjct: 1200 LKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLV 1259
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1260 GKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSINILDENDNTPSFPKSTLFVDVLENMRI 1319
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1320 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1361
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPKGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+D DL + + + + A N + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S++ + I + +GG +V I V+++NDN P L V VEN I Q
Sbjct: 859 QSFYQLKIVA--SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAK 916
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + R+ Y + NP++ F I+ +G++
Sbjct: 917 AVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNI 949
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F +++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNVQSG 743
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F IDI SG +
Sbjct: 1256 RQFAIDITSGQVA 1268
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ FNI+ +G +
Sbjct: 2707 IVNGNMENSFNINHATGEI 2725
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F IDI S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F +D +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVVDPNTG 3248
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------F 50
Y+ ++EN ++ L A+D D + I+Y + + + + + F
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQGFLDF 3258
Query: 51 NIDIGSDLT----GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
LT PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3259 ETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVG 3318
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3319 EVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ FNI+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSAVDKDSGPNGQLDYEIVNGNMENSFNINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSPLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDI 2801
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|149052656|gb|EDM04473.1| rCG33481 [Rattus norvegicus]
Length = 3111
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 1036 VYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQ 1095
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 1096 ELDYETHQHFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCG 1155
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D+ R+ Y I +GN + +F+I+ SG
Sbjct: 1156 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSG 1194
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 1538 DLVSLVSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 1597
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 1598 LSVEPGSNIHELFAVDSESG 1617
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D+ R+ Y I +GN + +F+I+ S +
Sbjct: 1141 EPQYEANVSELATCGHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFN 1200
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ VYI N N P VY A++ EN +
Sbjct: 1201 LCKKQLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 1260
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 1261 IELLAIDKDSGPYGTVDYTI 1280
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 1562 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWIT 1620
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 1621 TLQELDCETQQTYSFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 1680
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
+ L D D+ D +++++ I+ G+P F+I
Sbjct: 1681 NEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSI 1719
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 934 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 990
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 991 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTP 1050
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 1051 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEI 1091
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 2046 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAVVGDVILT 2104
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F I+ G L
Sbjct: 2105 VSASDDDGPVNSAITYSLVGGNQLGHFTINPKKGKL 2140
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + + + ++Q+ A D D + I Y GN + +FNID
Sbjct: 320 YEANVPDTTAPGTELLQVRAVDADRGANAEIHYSFLKGNSDGFFNIDSLLGIITVAQRLY 379
Query: 54 ----------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ ++ G P + L +V I V + + P+ Y+ +I E+ PI
Sbjct: 380 HVHLTRHALTVKAEDQGSPRRHDLALVVIHVHPSDSSAPVFSKDEYFIEIPESVPIGSPI 439
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ L+A ++Y++ GN +S F+++ SG
Sbjct: 440 LLLSAGSS-----SEVTYELREGNKDSVFSMNSYSG 470
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L +Y +I E + + A D D+ P + + SY I GN E F ID
Sbjct: 3418 LQTLYEVEISEGAPVGSKVTAVKAVDKDVRPQNNQFSYSIIGGNIEQAFKIDPQSGQIET 3477
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+G TG P Q V I + ++NDN P T DP +++EN+
Sbjct: 3478 ARFLDRETTPEYSLVVGGIDTGLPPQTGTTTVKIHITDINDNGP-TFDPRVVGKVLENEP 3536
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
I+ L+A D DL P+ +YK+ G + ID SG
Sbjct: 3537 PNTKIMTLSAKDPDLPPNGAPFTYKLIGGKHRDFVKIDKHSG 3578
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 29/165 (17%)
Query: 5 PVYYA---QIV--ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------ 53
PV+ A Q++ EN+ I+ + ASD D P+ I YKIS GN F +D
Sbjct: 3100 PVFTALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGNERKEFAVDPYSGAV 3159
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
DL P ++ I + ++NDN P +Y A I EN
Sbjct: 3160 TILQPLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISEN 3219
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + I Y IS G + F ID +G +
Sbjct: 3220 LPPNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRV 3264
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
++Q A+D DL + + + ISAGN + F++D I +
Sbjct: 1323 LIQFRATDADLGMNSEVVFSISAGNRKDTFHVDPSSGTLYLHKPLDYEELSAYQLNITAS 1382
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P I++ I V++ NDN P QI E S PIV + A D D +
Sbjct: 1383 DNGNPRLSTTILFAIAVEDANDNPPSFPSTAIVRQIREGISVHTPIVTVTADDPDYGING 1442
Query: 117 RISYKISAGNPE---SYFNIDIGSG 138
+++Y IS PE +F I+ +G
Sbjct: 1443 KVTYAISQQEPEDSNRHFGINPVTG 1467
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
L VY V ++NDN P+ DP+ Y +I EN S PIV ++A+D D + +I ++I+AG
Sbjct: 1922 LTVYCNVLDLNDNTPL-FDPMSYTNEIFENVSIATPIVTVSATDLDSGDNGKIVFRITAG 1980
Query: 126 NPESYFNI 133
+ F +
Sbjct: 1981 DENGDFEM 1988
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V + +++VND+ P+ Y ++E+ LAASD DL + RISY IS GN
Sbjct: 970 LVRVVIEDVNDHTPVFDHTSYETSLLESTPVNERFFALAASDTDLGLNGRISYVISEGNT 1029
Query: 128 ESYFNI 133
E F I
Sbjct: 1030 EGKFGI 1035
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPES----------------------YFNIDIGSDLTGG 61
LAASD DL + RISY IS GN E Y+++ + + G
Sbjct: 1007 LAASDTDLGLNGRISYVISEGNTEGKFGIFPDGFLYVRQSLDREDKDYYSLSVTASDLGN 1066
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + ++ V I V + NDN P + + I EN+ + +L A+D D+ + + +
Sbjct: 1067 PSRSSVVPVVIHVIDENDNSPEFTNASFSFNIRENEPPDSFVGKLTATDRDIGRNAELIF 1126
Query: 121 KISAGNPESYFNIDIGSG 138
+S N +S F ID +G
Sbjct: 1127 SLS--NSQSDFVIDPKNG 1142
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V ++V + NDN P ++E ++Q A+D DL + + + ISAGN +
Sbjct: 1290 VSVEVMDENDNSPEFTQTNSKISVIETTPVNTELIQFRATDADLGMNSEVVFSISAGNRK 1349
Query: 129 SYFNIDIGSGSL 140
F++D SG+L
Sbjct: 1350 DTFHVDPSSGTL 1361
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------DIGSDLT 59
Y A I EN S ++Q++A+D D + R+ Y I++G+ F+I + +L
Sbjct: 2155 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLN 2214
Query: 60 GGPDQVYLI----------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
Y++ + I V ++NDN P LD Y A ++EN
Sbjct: 2215 YERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLAYVMENT- 2273
Query: 98 GILP----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
I P ++ + A D D P + + Y I G P++ F I+ +G +
Sbjct: 2274 -IPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDT-FKINASTGEI 2319
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D R+S +I +Y D P + +++++ + NDN P+ DP
Sbjct: 2096 GPVDGLLRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPV-FDPKQ 2154
Query: 89 Y-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y A I EN S ++Q++A+D D + R+ Y I++G+ F+I +G
Sbjct: 2155 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTG 2205
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
Query: 3 LDPVYYAQIVENQSGILP----IVQLAASDGDLDP-DQRISYKISAGNPESY-------- 49
LD Y A ++EN I P ++ + A D D P + + Y I G P+++
Sbjct: 2261 LDSPYLAYVMENT--IPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKINASTGE 2318
Query: 50 --------------FNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+ + +G+ TG P V I VQ+VND+ P Y+A I E
Sbjct: 2319 ISLLRALDREAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSYHATINE 2378
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
N +V A+D D+ + +I Y + G+ F ID +G
Sbjct: 2379 NSPLSTWVVTPTATDKDIGLNAKIRYSL-LGDKVDRFKIDQDAG 2421
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 15 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPDQVYLIVYI 71
Q G L + A D + I+Y I GN F ID + LT ++ +
Sbjct: 3011 QEGQLLLKVTAKDKLDFGVNAEINYVIVGGNGSENFAIDKYNGWITLTKPVTEIGQEYLL 3070
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILP--------------------IVQLAASDGD 111
+V+ ++ VP D V +V ++ +P I+ + ASD D
Sbjct: 3071 RVRAIDKGVPPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNASDDD 3130
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ I YKIS GN F +D SG++
Sbjct: 3131 QGPNGMIRYKISGGNERKEFAVDPYSGAV 3159
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+V + VY V +VNDN P L Y Q+ E +++L SD D + + Y I
Sbjct: 1180 DKVKVNVY--VTDVNDNPPKFLRTPYRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSI 1237
Query: 123 SAGNPESYFNIDIGSGSL 140
GN + F I+ +G +
Sbjct: 1238 VQGNDDGRFTIEEATGQI 1255
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--GGP 62
++ + EN ++Q+ +SD D+ + +Y + NP F ID I ++T G
Sbjct: 2789 LFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSFTE-NPGEKFKIDPISGNVTVVGHL 2847
Query: 63 DQV----YLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
D+ YL+ + I +Q+ NDN P Y E Q ++ + Q
Sbjct: 2848 DREQQDEYLLKVAAVDGAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQRDVVFVGQ 2907
Query: 105 LAASDGDLD-PDQRISYKISAGNPESYFNIDIGSGSL 140
+AA+D D P+ ISY + P F +D SG +
Sbjct: 2908 VAATDRDKQGPNSVISYSLQ--QPSDLFTVDPASGDI 2942
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLT----------------GGPDQV-YLIVY 70
DG+ D R++ ++ SY +++ L G P + YL V
Sbjct: 171 DGNKDDKFRLALTVNPAGETSYLHLETTGKLDRESQGFYFLNISARDGGAPPKFGYLQVN 230
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ Y + E+ P++Q+ A+D DL + +I+Y ++ + E
Sbjct: 231 VTILDVNDNPPIFDHSDYIVSLNESVLPGTPVLQVMATDNDLGDNAKITYYLA--DTERQ 288
Query: 131 FNIDIGSG 138
F +D +G
Sbjct: 289 FTVDPETG 296
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + L + I V + NDN P+ +Y A I+E +S +V+++A D D + +++YK
Sbjct: 2661 PLRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYK 2720
Query: 122 ISAGNPESYFNIDIGSGSL 140
++ + + F ID SG +
Sbjct: 2721 LT-DDFDGTFEIDSESGEI 2738
>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 1810
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V + NDNVP +D ++E S +++ A+D DL P+ +++ ISAGN
Sbjct: 1350 VYIEVLDENDNVPRFIDNKSRISVLETISINTELLRFKATDNDLGPNSELTFAISAGNRR 1409
Query: 129 SYFNIDIGSGSL 140
F+ID +G L
Sbjct: 1410 DTFHIDPLTGIL 1421
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
++E S +++ A+D DL P+ +++ ISAGN F+ID
Sbjct: 1373 VLETISINTELLRFKATDNDLGPNSELTFAISAGNRRDTFHIDPLTGILYLRKSLDYEEL 1432
Query: 54 -------IGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
SD GG ++ I + ++V + NDN P+ + QI E PIV
Sbjct: 1433 NYYTLNVTCSD--GGHPRLSSITSLIVEVIDANDNPPVFPNTAIVRQIREGIPVRTPIVT 1490
Query: 105 LAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSG 138
+ A D D + +SY I +PE +F I+ +G
Sbjct: 1491 ITAEDPDSGDNGIVSYSILNQDPEDQVRHFGINSSNG 1527
>gi|344252729|gb|EGW08833.1| Protocadherin Fat 2 [Cricetulus griseus]
Length = 3133
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D D D + Y + AG F+I+
Sbjct: 266 VYQGQVQENSPAGTQVMVVTAQDEDGGLDGELQYFLRAGTGLEAFSINQDTGMLETLVPL 325
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y + E+
Sbjct: 326 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPCMSRPVFYPCVQEDVPLGTS 385
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN YF I +G L
Sbjct: 386 VLQLEAWDPDSSSQGKLTFNLTSGNHMGYFVIHPFTGVL 424
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 1506 VYTTSVSEGLPAQTPVIQLLASDQDSGKNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQ 1565
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 1566 ELDYEAQQHFQVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCG 1625
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D+ R+ Y I +GN + +F
Sbjct: 1626 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHF 1657
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 1980 DLVSLVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2039
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2040 LSVEPGSNIHELFAVDNESG 2059
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 1404 PYYKVKVPENIALYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 1460
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 1461 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTP 1520
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 1521 VIQLLASDQDSGKNQDVSYQIVEDGSDVSKFFRINGSTGEM 1561
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2004 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDNESGWIT 2062
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q+Y +V + + + NDN P Y +VEN
Sbjct: 2063 TLKELDCETQQIYHFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2122
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+ L D D+ R ++ I+ G+P F I+
Sbjct: 2123 SEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGIN 2162
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-------IGSDL 58
Y +VEN + L D D+ R ++ I+ G+P F I+ I S
Sbjct: 2115 YRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGINQVGDEWRISSKK 2174
Query: 59 T----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
T G Q + V + V ++NDN P +Y ++ E+ + I
Sbjct: 2175 TLDREHIAKYLLRVTASDGKFQTSVPVEVFVLDINDNSPQCSQLLYTGRVHEDVTPGHFI 2234
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A D D+D + +I+Y + + F +D +G L
Sbjct: 2235 LKVSAVDADMDTNAQITYSLHGPGAQE-FKLDPHTGEL 2271
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P Y A + + + ++Q+ A D D + + Y G
Sbjct: 768 FVWVTIHVEDGNLHPPHFTQLHYEANVPDTTAPGTELLQVRAMDADRGANAEVHYSFLKG 827
Query: 126 NPESYFNIDIGSGSL 140
N E +FNID G++
Sbjct: 828 NSEDFFNIDTLFGTI 842
>gi|291244990|ref|XP_002742376.1| PREDICTED: hedgling-like, partial [Saccoglossus kowalevskii]
Length = 3129
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 26 ASDGD-LDPDQRISYKISAGNPESYFNIDI--GSDLT--------------------GG- 61
A+D D + D +++Y I+ GN E F +D+ G LT GG
Sbjct: 2490 ATDEDAIGSDGKVTYNITEGNSEEKFTVDLYSGDVLTKSLLDREITDQYILEITATDGGD 2549
Query: 62 -PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + + I V++VNDN P+ +Y I+EN + + + A+D D + I Y
Sbjct: 2550 TPLTGTVTLSITVEDVNDNTPIFSQDIYTTSILENINIGTSVFTVIATDIDSGANSNIEY 2609
Query: 121 KISAGNPESYFNIDIGSGSL 140
I+ G FNIDI +G +
Sbjct: 2610 NITGGMSHEDFNIDIATGEI 2629
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGPD- 63
+Y I+EN + + + A+D D + I Y I+ G FNIDI + ++T D
Sbjct: 2576 IYTTSILENINIGTSVFTVIATDIDSGANSNIEYNITGGMSHEDFNIDIATGEITTAADI 2635
Query: 64 -----QVY-----------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++Y +V I++ + NDNVP+ I EN
Sbjct: 2636 DFETRKMYSLTVQATDGGTPVRSSDTVVRIKINDYNDNVPVIFPNGVTISIFENSPSDTL 2695
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ D D D + +++ ++ G+P F ID SG
Sbjct: 2696 VIPQWVVDEDSDENGNVTFLLADGDPLGQFYIDNWSG 2732
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------- 49
Y I E+Q ++ + A+D D + + +++Y I++GN ++
Sbjct: 2791 YDTTISEDQHVGTSVLTIIATDDDANENGQLTYDITSGNDGTFALASTSGVLSVVMPLDR 2850
Query: 50 -----FNIDIGSDLTG-GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++++ G P I + ++NDNVP V + EN +
Sbjct: 2851 ETTASYSLEVTVTDNGLVPLFAQTTFTITIADINDNVPQFAQSVLKLYVAENVPLSTLVD 2910
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D DL + ++Y IS+G +F +DI +G L
Sbjct: 2911 TLLATDPDLGDNGLVNYTISSGVNADHFILDIETGVL 2947
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 29/156 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y I EN IV+++A D QRI Y GN ++ FNID
Sbjct: 2209 TYIVNIAENTEQFKDIVRVSAVRTD-GRRQRIHYSFGTGNEDNIFNIDTETGVIQVHDPK 2267
Query: 54 -------------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE-NQSG 98
+ + GGP Y V +Q+ ++NDN P Y A + E N+ G
Sbjct: 2268 NLDYELHKEIRLVVEAKTEGGPVLHGYCEVVMQLTDINDNAPKFTQQQYSASVWEGNKKG 2327
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++Q+ A D D + RI Y GN ++ F I+
Sbjct: 2328 AF-VLQVVAFDDDEGHNSRIRYHFLDGNHDNAFKIE 2362
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R SY + I IG D + V I + + NDN P+ Y
Sbjct: 2642 LDREHRDSYSLK---------ITIG-------DSAVIAVSIIIVDTNDNAPVFKQSDYET 2685
Query: 91 QIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSGSL 140
I E I + A+DGD P+ I+Y I++GN E F +D+ SG L
Sbjct: 2686 TISEGTPVGTSIKKFEATDGDSAGPNSDITYDITSGNDELLFRLDVISGVL 2736
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +D P + + V ++NDN P VY A ++E ++Q+ A+D D
Sbjct: 414 VATDRGNPPLHASRTINLMVTDINDNAPEFDQEVYQANVMEVSDPGTSVIQVLATDKDEG 473
Query: 114 PDQRISYKI--SAGNPESYFNIDIGSG 138
+ ISY + + S+F ID SG
Sbjct: 474 NNSAISYSLLDTVETHSSWFQIDPRSG 500
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P L V ++VQ+VNDN P+ Y + E++ I+Q+ A D D + R++Y+
Sbjct: 1006 PLSANLTVLVEVQDVNDNPPVFERNEYSKSVEESRPVNSQILQVTAVDLDTGNNARLTYR 1065
Query: 122 ISAGN 126
+ GN
Sbjct: 1066 LLPGN 1070
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 24/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y + E+ + + A+ D + I Y I +G+PE +F ID
Sbjct: 820 PRYTYSVKEDVRKETIVGNVKATVRDSGDRKNIRYSIYSGDPEGFFRIDPSTGAIRTASA 879
Query: 54 ----------IGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ T G VY V I++Q+VNDN P V + EN +
Sbjct: 880 LDHELRSSVLLNIQATNGDPPVYGHTQVNIEIQDVNDNAPEFESNVVRISVPENVETGIA 939
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
+ A D D + + YKI + G FN+D G L
Sbjct: 940 LYAAHARDRDSGANGVVRYKIVNNGATGGLFNVDPKLGHL 979
>gi|432106744|gb|ELK32396.1| Cadherin-23 [Myotis davidii]
Length = 1266
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT---GGP 62
Y + EN G +VQ+ A+D D+ + +SY I+AGN + F +D I ++T P
Sbjct: 1096 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITAGNDDMTFRMDRITGEITTRPAPP 1155
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+ + Y V V D L N G +VQ+ A+D D+ + +SY I
Sbjct: 1156 DREHQSFYHLVVTVEDEGTPPL---------SNVGGGTAVVQVRATDRDIGINSVLSYYI 1206
Query: 123 SAGNPESYFNIDIGSGSL 140
+AGN + F +D +G +
Sbjct: 1207 TAGNDDMTFRMDRITGEI 1224
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 563 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVNL 622
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 623 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 677
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN ++F I + G L
Sbjct: 678 DIPEGHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLL 723
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 102 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 161
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 162 YSIVNASAFGSYFDISVYEG 181
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1061 VASDRGTPPRKKSHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1120
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+AGN + F +D +G +
Sbjct: 1121 GINSVLSYYITAGNDDMTFRMDRITGEI 1148
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-- 60
L Y A + E+ IVQL A+D D R+ Y+I GN ++F I + L
Sbjct: 667 LQSSYEASVPEDIPEGHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLLVRG 726
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V + V++VND P+ Y + +
Sbjct: 727 PQPLDREQDSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETA 786
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
GI ++ + A+D D I+Y+I +G E F ID +G
Sbjct: 787 GIGTSVIVVKATDRDTGDGGLINYRILSG-AEGKFEIDESTG 827
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
+ A+++E + + Q+ A D D + +SY++ G P F I+ S +
Sbjct: 459 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTTELD 518
Query: 59 ---------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P + + I+V +VND P VY + E+ +
Sbjct: 519 RERIAQYQLRVVATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 578
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 579 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 609
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 130 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYAVISVSR 189
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VE+
Sbjct: 190 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVESIM 249
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I SG L
Sbjct: 250 AGATVLILNATDLDRSREYGQESIIYSLEGSSQFRIGARSGEL 292
>gi|443692745|gb|ELT94275.1| hypothetical protein CAPTEDRAFT_182259 [Capitella teleta]
Length = 1173
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 24 LAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVY-LIVYIQVQNVN 77
L +S D+ P Q+ YKI + + + +N+ + G P QV ++ I+V ++N
Sbjct: 400 LDSSHFDIQPLQKRKYKIVSASTFDREIQDVYNVTLSCHDNGVPRQVTESVISIKVADIN 459
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
D+ P+ +Y A++ EN S L + Q+ A DGD + +SY++ G F++D +
Sbjct: 460 DHAPVFSQLLYEAEVKENVSPGLFVTQVTALDGDTGKNAEVSYEL-YGQLSHLFSVDAET 518
Query: 138 GSL 140
G +
Sbjct: 519 GKI 521
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
P+ F + I D + + V + V ++NDN P Y ++I EN +V +
Sbjct: 213 PDYEFTV-IAKDGGNPAKRASMRVNVTVTDINDNHPEFKLNKYQSRIKENSDVPKTLVTV 271
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNI 133
A+D D P+ RI+Y++++ ++Y NI
Sbjct: 272 EATDADTGPNGRITYELASSTRQNYGNI 299
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG---------- 55
+Y A++ EN S L + Q+ A DGD + +SY++ G F++D
Sbjct: 469 LYEAEVKENVSPGLFVTQVTALDGDTGKNAEVSYEL-YGQLSHLFSVDAETGKITTQSEL 527
Query: 56 -----SDLT--------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SDLT G P + I++ +VND P+ Y +VEN+
Sbjct: 528 DHESFSDLTIHVVATDHGEPALSSNAEIKIKIIDVNDEAPIFTQESYTFVVVENKPRDFE 587
Query: 102 IVQLAASDGDLDPDQRISYKIS----AGNPESYFNIDIGSGSL 140
+ ++ A D D P I+Y ++ + + FN++ SG L
Sbjct: 588 LGRIEAFDRDASPFNHITYSMTDFANQSSTMNVFNLEEASGVL 630
>gi|156383976|ref|XP_001633108.1| predicted protein [Nematostella vectensis]
gi|156220173|gb|EDO41045.1| predicted protein [Nematostella vectensis]
Length = 4639
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 1538 FLTVSATDGDAGANSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 1594
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E + P+ + ASD D+
Sbjct: 1595 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETAAIDTPVATVIASDKDIG 1654
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 1655 ANGRLMYSIESG-AHGHFQIKDSSSGAI 1681
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 3873 FLTVSATDGDAGANSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 3929
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E + P+ + ASD D+
Sbjct: 3930 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETAAIDTPVATVIASDKDIG 3989
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 3990 ANGRLMYSIESG-AHGHFQIKDSSSGAI 4016
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 1235 FLTVSATDGDAGANSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 1291
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E P+ + ASD D+
Sbjct: 1292 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETAEIDTPVATVIASDKDIG 1351
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 1352 ANGRLMYSIESG-AHGHFQIKDSSSGAI 1378
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 2014 FLTVSATDGDAGANSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 2070
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E P+ + ASD D+
Sbjct: 2071 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIRVSLSETAEIDTPVATVIASDKDIG 2130
Query: 114 PDQRISYKISAGNPESYFNI 133
+ R+ Y I +G +F I
Sbjct: 2131 ANGRLMYSIESG-AHGHFQI 2149
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+ GN E +F+I+ + TG DQ L V
Sbjct: 932 FLTVSATDGDAGANSALTYSIAVGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 988
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E P+ + ASD D+
Sbjct: 989 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAEIDTPVATVIASDKDIG 1048
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 1049 ANGRLMYSIESG-AHGHFRIKDSSSGAI 1075
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+ GN E +F+I+ + TG DQ L V
Sbjct: 3570 FLTVSATDGDAGANSALTYSIAVGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 3626
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E P+ + ASD D+
Sbjct: 3627 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAEIDTPVATVIASDKDIG 3686
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 3687 ANGRLMYSIESG-AHGHFRIKDSSSGAI 3713
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 648 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 707
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 708 YSIAAGNEEGFFSINNKTGAI 728
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 1193 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 1252
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 1253 YSIAAGNEEGFFSINNKTGAI 1273
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 1496 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 1555
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 1556 YSIAAGNEEGFFSINNKTGAI 1576
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 1972 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 2031
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 2032 YSIAAGNEEGFFSINNKTGAI 2052
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 3831 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 3890
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 3891 YSIAAGNEEGFFSINNKTGAI 3911
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 30/147 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+ GN E +F+I+ + TG DQ L V
Sbjct: 3012 FLTVSATDGDAGANSALTYSIAVGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 3068
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E P+ + ASD D+
Sbjct: 3069 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAEIDTPVATVIASDKDIG 3128
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ R+ Y I +G + D SG++
Sbjct: 3129 ANGRLMYSIESGALGHFQIKDWSSGAI 3155
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 26/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
+ ++A+D D + ++Y I+AGN E F+I+ + L +Y++
Sbjct: 4176 FLTVSATDSDAGANSALTYSIAAGNEEGVFSINNKTAAISVAKQLDRETRDLYMLTVMAQ 4235
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V IQV + NDN P+ D V + E + P+ + ASD D+ +
Sbjct: 4236 DGGEPSLNRTAAVPIQVGDANDNPPVIQDAVIRVSLSETAAIDTPVATVIASDKDIGANG 4295
Query: 117 RISYKISAGNPESYFNI-DIGSGSL 140
R+ Y I +G +F I D SG++
Sbjct: 4296 RLMYSIESG-AHGHFQIKDSSSGAI 4319
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 890 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 949
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+ GN E +F+I+ +G++
Sbjct: 950 YSIAVGNEEGFFSINNKTGAI 970
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 2970 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 3029
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+ GN E +F+I+ +G++
Sbjct: 3030 YSIAVGNEEGFFSINNKTGAI 3050
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 3528 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 3587
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+ GN E +F+I+ +G++
Sbjct: 3588 YSIAVGNEEGFFSINNKTGAI 3608
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 3273 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGANSALT 3332
Query: 120 YKISAGNPE 128
Y I+AGN E
Sbjct: 3333 YSIAAGNEE 3341
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV + NDN P+ D V + E + P+ + ASD D+ + R+ Y I +G
Sbjct: 1783 VAIQVGDANDNPPVIQDAVIRVSLSETAAIDTPVATVIASDKDIGANGRLMYSIESG-AH 1841
Query: 129 SYFNI-DIGSGSL 140
+F I D SG++
Sbjct: 1842 GHFQIKDSSSGAI 1854
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + V + V ++ND P P + + E + + ++A+D D + ++
Sbjct: 4134 GGIVKGLFKVTVNVLDINDETPSFQSPSFNVSVNEIERLGTVFLTVSATDSDAGANSALT 4193
Query: 120 YKISAGNPESYFNID 134
Y I+AGN E F+I+
Sbjct: 4194 YSIAAGNEEGVFSIN 4208
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVND 78
P ++ +S GDL ++ + + + GN ++ SD Q L + + ++ND
Sbjct: 2462 PWFRINSSTGDLIVNKTLDRE-AMGNGLGSLRFEVYASD---SSSQGSLTAILTITDIND 2517
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
N P + EN+ L + L A+D D + I++ I +GN F+ID +G
Sbjct: 2518 NAPAFQNTPLTVSCSENRPIGLTVATLTATDADATTNAIITFVIVSGNEGEAFSIDKVTG 2577
Query: 139 SL 140
+
Sbjct: 2578 DI 2579
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-------------DPDQRISYKIS--AGNPESYFN 51
Y +VEN ++ L A+DGDL + DQR S+++ +G + +
Sbjct: 549 YNVSVVENSPTGTELLVLRATDGDLGDNGTVRFSLQEAEADQR-SFRLDPVSGRLSTISS 607
Query: 52 ID-----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D + +DL P + + + +VNDN P+ Y+A I EN+ G
Sbjct: 608 LDREEQAFYSLLVLATDLGSPPQSSVARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGS 667
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL P+ + Y +SAG+ S F ++ SG
Sbjct: 668 YITTVSATDPDLGPNGTVKYSLSAGD-RSRFQVNAQSG 704
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1157 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEE 1216
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1217 RQFAIDSNSGQV 1228
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL P+ + Y +SAG+ S F ++ S +
Sbjct: 655 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSLSAGD-RSRFQVNAQSGVISTKMALD 713
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 714 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 771
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 772 HVGSVSASSMDLNSN--ISYLITTGDQKGMFAINQVTGQL 809
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2028 VFKAQATDPDSGPNSYIEYPLLTPLGNKFSIGTIDGEVRLTGELDREEVSTYSLTVVATD 2087
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
++V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2088 KGQPALSSSTEVVVRVLDINDNNPVFAQALYKVEINENTLTGTDIIQVLAADGDEGTNGQ 2147
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2148 VRYGIVEGNANQEFRIDSVTGTI 2170
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1172 LKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSNSGQVTLI 1231
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1232 GTLDYEATPAYSLVIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1291
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1292 GELVSSVTATDSDSGDNADLQYSITGTNNHGTFSISPNTGSI 1333
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID + L
Sbjct: 2117 LYKVEINENTLTGTDIIQVLAADGDEGTNGQVRYGIVEGNANQEFRIDSVTGTITVAKPL 2176
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
YL+ V I + ++ND VP+ Y + EN LP
Sbjct: 2177 DREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVTVPENLE-TLP 2235
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYF 131
I+Q+ A D D + ++SY + GN ++ F
Sbjct: 2236 KTILQVVARDDDQGSNSKLSYVLLGGNEDNAF 2267
>gi|432099003|gb|ELK28485.1| Protocadherin Fat 1 [Myotis davidii]
Length = 1119
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--------------- 54
++ E+Q I+ + A+D D + ++ Y IS GN +S F ID+
Sbjct: 725 EVKESQPVGSSILLVNATDLDTGFNGKLVYAISGGNEDSCFLIDVDTGMLKVLSPLDRET 784
Query: 55 ---------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
SDL V+ ++ I+V + NDN P L Y+ ++ E+Q I+Q+
Sbjct: 785 TDRYTLNITASDLGLPQKAVWRLLDIRVLDANDNPPEFLQESYFVEVSEDQEMGSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ +++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGQVTYSILTDTDQ--FSIDSVTG 875
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------------- 45
L Y+ ++ E+Q I+Q+ A+D DL P+ +++Y I
Sbjct: 823 LQESYFVEVSEDQEMGSEIIQVEATDKDLGPNGQVTYSILTDTDQFSIDSVTGVVKVVQP 882
Query: 46 ------PESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P Y I+ T P +++ + V++VNDN P + Y+ ++ E+
Sbjct: 883 LDPEVQPVHYLKIEARDQATEEPRLFSTVLLKVSVEDVNDNPPKFIPAHYHVKVREDLPE 942
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A D DL ++ Y + + E +F++D SG++
Sbjct: 943 GTIVMWLEAYDPDLGQSSQVRYSL-MDHGEGHFDVDKLSGAV 983
>gi|354474447|ref|XP_003499442.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cricetulus
griseus]
Length = 4323
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D D D + Y + AG F+I+
Sbjct: 1026 VYQGQVQENSPAGTQVMVVTAQDEDGGLDGELQYFLRAGTGLEAFSINQDTGMLETLVPL 1085
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y + E+
Sbjct: 1086 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPCMSRPVFYPCVQEDVPLGTS 1145
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN YF I +G L
Sbjct: 1146 VLQLEAWDPDSSSQGKLTFNLTSGNHMGYFVIHPFTGVL 1184
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2266 VYTTSVSEGLPAQTPVIQLLASDQDSGKNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQ 2325
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 2326 ELDYEAQQHFQVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCG 2385
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D+ R+ Y I +GN + +F
Sbjct: 2386 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHF 2417
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2754 DLVSLVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2813
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2814 LSVEPGSNIHELFAVDNESG 2833
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 22/138 (15%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL------------ 67
P+ +LAA+D D + Y I+ GN E F+I++ G P +Y+
Sbjct: 733 PLARLAATDPDAGFHGSLVYVIADGNEEGCFDIELK---IGAPXSLYVLNVTVYDLGTPQ 789
Query: 68 -----IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
++ + V++ NDN P Y I E+ I +L D D + ++R+ Y +
Sbjct: 790 KSSWKLLTVTVKDWNDNPPRFPPGGYQLTISEDTEVGTTIAELKTKDADSEDNRRVRYSL 849
Query: 123 SAGNPESYFNIDIGSGSL 140
P F++ +G L
Sbjct: 850 LT--PTEKFSLHPLTGEL 865
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 2164 PYYKVKVPENIALYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2220
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2221 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTP 2280
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2281 VIQLLASDQDSGKNQDVSYQIVEDGSDVSKFFRINGSTGEM 2321
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2778 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDNESGWIT 2836
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q+Y +V + + + NDN P Y +VEN
Sbjct: 2837 TLKELDCETQQIYHFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2896
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+ L D D+ R ++ I+ G+P F I+
Sbjct: 2897 SEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGIN 2936
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-------IGSDL 58
Y +VEN + L D D+ R ++ I+ G+P F I+ I S
Sbjct: 2889 YRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGINQVGDEWRISSKK 2948
Query: 59 T----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
T G Q + V + V ++NDN P +Y ++ E+ + I
Sbjct: 2949 TLDREHIAKYLLRVTASDGKFQTSVPVEVFVLDINDNSPQCSQLLYTGRVHEDVTPGHFI 3008
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A D D+D + +I+Y + G F +D +G L
Sbjct: 3009 LKVSAVDADMDTNAQITYSLH-GPGAQEFKLDPHTGEL 3045
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P Y A + + + ++Q+ A D D + + Y G
Sbjct: 1528 FVWVTIHVEDGNLHPPHFTQLHYEANVPDTTAPGTELLQVRAMDADRGANAEVHYSFLKG 1587
Query: 126 NPESYFNIDIGSGSL 140
N E +FNID G++
Sbjct: 1588 NSEDFFNIDTLFGTI 1602
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 5 PVYYAQ----IVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--------------- 45
PV+ ++ ++E++ ++ + A D D + R++Y+I +GN
Sbjct: 837 PVFVSRTETYVMEDEPVGYHVMYVIAVDDDFGDNGRVTYQIVSGNQGGKFLLDPNTGLLA 896
Query: 46 --------PESYFNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
ES + ++I + G P + ++ I V++VNDN P L Y A + ENQ
Sbjct: 897 IERRLDRETESRYVLNITATDHGTPSRSASHLITIHVRDVNDNQPRFLQDTYQASVSENQ 956
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S ++Q+ A D D + ++Y I G E F I+ +G
Sbjct: 957 SPGTSVIQITALDADAGTNGVLTYNIPRGVAEDRFTIEEQTG 998
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
Y A I EN I+ ++AS D P ++Y ++GN + F I+ S L D
Sbjct: 1370 TYSAYISENAIANTDIISVSASREDGQP-ASVTYSFASGNDDESFEINPTSGLITVKDST 1428
Query: 66 -------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y V++ +++ NDN P Y + E +
Sbjct: 1429 NLDFETAQRVRLIVTAQATTPSLYGYATVWVNLRDENDNAPRFDQDRYTTSVWEGNDRGM 1488
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q++A+D D + + Y I +GN ++ F ID G
Sbjct: 1489 FVIQVSATDADSGTNSEVQYSIVSGNHDNAFVIDRDRG 1526
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IG 55
L Y A + ENQS ++Q+ A D D + ++Y I G E F I+
Sbjct: 944 LQDTYQASVSENQSPGTSVIQITALDADAGTNGVLTYNIPRGVAEDRFTIEEQTGVIRTA 1003
Query: 56 SDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
L Y++ V + V + ND+ P+ D Y + ENQ
Sbjct: 1004 FRLDREEKDSYIVTAYARDGAYPSRFGFTSVVVSVLDTNDHAPVFKDAEYMMTVPENQPN 1063
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A D D+ + ++ Y+I GN F +D +G L
Sbjct: 1064 YGVIHTVVAYDADIGTNGQVRYEIIDGNVGGKFAVDAVTGEL 1105
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 60 GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P++ + VY+ V +VND+ P+ Y AQI E +V++ A D D P+ I
Sbjct: 1873 GTPERNSTVTVYVLVDDVNDHSPIFNSTQYVAQISEEAVIGAFVVRVFAFDADSGPNADI 1932
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y+I++GN +S F I+ SG
Sbjct: 1933 HYEITSGNDDSLFAINSQSG 1952
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP----ESYFNIDIGSDLT--- 59
Y ++ E+Q ++++ A D D + I+Y++ P E FNI S L
Sbjct: 520 YLGEVEEHQPNGTEVIRVLADDPDNGENGTITYRLVTSTPGMNGEEMFNIHSQSGLITTN 579
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P + V+I V + NDN P+ ++ ++ E
Sbjct: 580 APLDREQKPTYVLSVAAVDGGTPPRERTTFVHIHVTDSNDNAPVFVNSTISIEVEEGLEA 639
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A D D + R+SY+I GN F +D +G +
Sbjct: 640 GSTIGSVHALDNDEGENGRVSYEIMQGNLYGTFGVDRNTGRI 681
>gi|327267535|ref|XP_003218556.1| PREDICTED: cadherin-23-like [Anolis carolinensis]
Length = 3346
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + EN +V+L +D D + +SY I+ GN + F N+
Sbjct: 984 VYNVSLPENIPRDFKVVRLNCTDADTGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVNL 1043
Query: 53 D-------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D I + TG V++ V +VNDN P L Y A + E+
Sbjct: 1044 DRETMPSYTLILEAIDNGPTGKRRTGTATVHVTVLDVNDNRPYFLQSSYEATVPEDIPDY 1103
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IVQ+ A+D D + R+ Y+I GN + F I+ SG
Sbjct: 1104 SSIVQVKATDADEGINGRVWYRIVKGNHFNNFRINPSSG 1142
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I VQ+VNDN+P Y + EN+ + +V++ ASD D P+ +I+
Sbjct: 523 GGGEETTGRVRINVQDVNDNIPTFQKDSYLGALRENEPSVTQVVRVRASDEDSPPNNQIT 582
Query: 120 YKIS-AGNPESYFNIDIGSG 138
Y I A +YF I++ G
Sbjct: 583 YSIVYASIFRNYFEINLSDG 602
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
L Y A + E+ IVQ+ A+D D + R+ Y+I GN + F I+ S L
Sbjct: 1088 LQSSYEATVPEDIPDYSSIVQVKATDADEGINGRVWYRIVKGNHFNNFRINPSSGLVMRG 1147
Query: 60 ----------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + + V + V++VND VP+ Y + +
Sbjct: 1148 LRVLDRERNSSHVLEVEAYNSEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETA 1207
Query: 98 GI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
GI + + A+D D ++YKI +G+ E F ID +G
Sbjct: 1208 GIGTSVAVVRATDRDTGNGGLVNYKIVSGS-EGKFEIDESTG 1248
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLD 113
SD P + + + + +VNDN P+ ++P Y + EN G + Q+ A+D D
Sbjct: 1484 ASDRGVPPRRKEHTLRVNILDVNDNPPVIVNPYGYNVSVNENVGGGTAVTQVRATDRDNG 1543
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN E F +D +G +
Sbjct: 1544 LNSVLSYYITHGNEELTFRMDRVTGEIA 1571
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 27/154 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE----------------------- 47
I E Q G + A DGD P ++ Y I AG+P
Sbjct: 1739 ITEGQPGPR-VWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRIRKDAELDRE 1797
Query: 48 --SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+++N+ I + G P ++V ++V ++NDN P+ L+ + EN + +
Sbjct: 1798 NIAFYNLTIAARDRGVPPLSSTVVVGVRVLDINDNDPVLLNLPMNLTLRENAPIASVVTR 1857
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + +++ I+AGN ++ F I+ +G
Sbjct: 1858 IFARDADYGRNALLTFSITAGNIDNAFFINGTTG 1891
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPDQVYLIVY------- 70
+ Q+ A D D D + ++ Y++ G P F I+ S L T D+ + Y
Sbjct: 894 VFQVVAIDLDEDVNGQVLYRMQVGMPRMDFVINSSSGLINSTAVLDRERIAEYYLRVIAS 953
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++V +VND P VY + EN +V+L +D D +
Sbjct: 954 DAGVPSKSSTSTLTVRVLDVNDENPTFFPVVYNVSLPENIPRDFKVVRLNCTDADTGLNA 1013
Query: 117 RISYKISAGNPESYFNIDIGSG 138
+SY I+ GN + F++ G
Sbjct: 1014 ELSYFITGGNQDGKFSVGFRDG 1035
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGPD-- 63
Y + EN G + Q+ A+D D + +SY I+ GN E F +D + ++ P
Sbjct: 1518 YNVSVNENVGGGTAVTQVRATDRDNGLNSVLSYYITHGNEELTFRMDRVTGEIATRPSPP 1577
Query: 64 -----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Q Y + VY+ + + NDN P+ Y + E +
Sbjct: 1578 DCERQQFYQLVVTVEDEGNPALSATTTVYVTIIDENDNAPVFRQQQYEVTLDEGPGTLNA 1637
Query: 102 I-VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + + A D D P+ + Y I+ GN F+I+ +G +
Sbjct: 1638 ILITINALDLDEGPNGTVIYTITEGNIMGTFHINSTTGQI 1677
>gi|291226386|ref|XP_002733173.1| PREDICTED: cadherin-23-like [Saccoglossus kowalevskii]
Length = 1584
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QV 65
YY IVEN +G L I + D ++Y++ E + NI +G+ G P
Sbjct: 914 YY--IVENSTGHLTIDKETG-------DITLNYEVDREEYE-WLNITVGAMDKGNPPLNS 963
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
VY Q+ ++NDN P+ + +++EN + PI ++A+D D+ + I Y I+AG
Sbjct: 964 TAAVYFQITDINDNAPVFTNLENETEVLENATIGTPIFTVSATDDDIGNNAFIVYSITAG 1023
Query: 126 NPESYFNIDIGSG 138
+ + F I++ +G
Sbjct: 1024 DEDKMFYINMYTG 1036
>gi|156347842|ref|XP_001621773.1| hypothetical protein NEMVEDRAFT_v1g221587 [Nematostella vectensis]
gi|156208027|gb|EDO29673.1| predicted protein [Nematostella vectensis]
Length = 1012
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG- 61
DP Y+ ++ + ++A+DGD + ++Y I+AGN E +F+I+ + TG
Sbjct: 79 FDPPYWTTVLPE----VNTTAVSATDGDAGANSALTYSIAAGNEEGFFSIN---NKTGAI 131
Query: 62 ----------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
DQ L V IQV + NDN P+ D V + E
Sbjct: 132 SVAKQLDRETRDQYTLTVMAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSET 191
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-DIGSGSL 140
+ P+ + ASD D+ + R+ Y I G +F I D SG++
Sbjct: 192 AAIDTPVATVIASDKDIGANGRLMYSIENG-AHGHFQIKDSSSGAI 236
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 499 FLTVSATDGDAGSNSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 555
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E + P+ + ASD D+
Sbjct: 556 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAAIDTPVATVIASDKDIG 615
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 616 ANGRLMYSIESG-AHGHFQIKDSSSGAI 642
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
+ ++A+DGD + ++Y I+AGN E +F+I+ + TG DQ L V
Sbjct: 802 FLTVSATDGDAGSNSALTYSIAAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 858
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E + P+ + ASD D+
Sbjct: 859 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAAIDTPVATVIASDKDIG 918
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 919 ANGRLMYSIESG-AHGHFQIKDSSSGAI 945
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 457 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGSNSALT 516
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 517 YSIAAGNEEGFFSINNKTGAI 537
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND P+ P + + E + + ++A+DGD + ++
Sbjct: 760 GGTIKGFVKVTVNVLDINDETPLFQSPSFNVSVNEIERLGTVFLTVSATDGDAGSNSALT 819
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+AGN E +F+I+ +G++
Sbjct: 820 YSIAAGNEEGFFSINNKTGAI 840
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---------------- 48
P+Y A + E+ +++ A+D D + ++Y ++AG ES
Sbjct: 449 PLYNATVSEDMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRT 508
Query: 49 --------YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y I + + GG V IV +QV +VNDN P+ +P Y +++ I
Sbjct: 509 PLDRETAPYLEIPVIATDRGGLSTV-AIVRVQVTDVNDNRPI-FEPRKYNVTLKSDGPIQ 566
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
PI++L A+D D+ +++Y+I+ GN F+ID +G L
Sbjct: 567 GPILRLVATDLDVGLFGQVAYRITNGNEAGVFHIDRNTGEL 607
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 59 TGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T GPD + Y+ V ++V +VNDN P+ Y A ++E +V+L+ASD D +
Sbjct: 2060 TSGPDPLEAYVKVVVKVSDVNDNPPIFTQTQYSATVLEGNVKGDFVVKLSASDADQGMNS 2119
Query: 117 RISYKISAGNPESYFNI 133
RI Y I GNP++ F I
Sbjct: 2120 RILYHIVDGNPDNAFTI 2136
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + L V + VQ+VNDN P+ Y A I EN + P++ + A+D D +
Sbjct: 99 LDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAENATVGTPVLAVNATDSDAGDN 158
Query: 116 QRISYKISA--GNPESYFNIDIGSG 138
RI Y I+ + E F ID +G
Sbjct: 159 GRIEYSINRRQSDREEMFRIDPETG 183
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + + Y + G+ N+ GS + P + V I V++VNDN P L+ ++
Sbjct: 2447 LDRETKDKYVLRLGSKNE--NMTTGSLVGDEP----VTVIITVEDVNDNYPRFLEDLHQV 2500
Query: 91 QIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDIGSGSL 140
I EN + L A D DL ++Y+I++GN F +D +G++
Sbjct: 2501 SIKENAVRGTTVAMLRAKDDDLAGSVAANLAYEITSGNDGGLFRVDKTTGAV 2552
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----------SAGNPESYFNID--- 53
Y A ++E P++++ A+D D + I Y + ++G + ++D
Sbjct: 349 YEAHLLEASEPGTPVLKVTATDLDEGANSAIKYSLLNSTWFVIDETSGLISTRTHVDCEA 408
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
I +D P V + V ++NDN P+ P+Y A + E+ +++
Sbjct: 409 DPAPILVVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSEDMPVGSCFLKV 468
Query: 106 AASDGDLDPDQRISYKISAGNPES 129
A+D D + ++Y ++AG ES
Sbjct: 469 QATDPDCGVNAMVNYTLAAGRMES 492
>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3282
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 47 ESYFNIDIGSDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ Y+ + + + GG P+ V I+V +VNDN P+ +YY+ V LP+
Sbjct: 1708 QEYYTVTVSAK-DGGLPPNYAKATVRIKVTDVNDNPPV-FGRLYYSIEVPENLEALPLFT 1765
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D + RI+YKI+AG+P F +D SG L
Sbjct: 1766 LRATDQDAGDNGRINYKITAGDPSGDFRLDGQSGVL 1801
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+YY+ V LP+ L A+D D + RI+YKI+AG+P F +D
Sbjct: 1748 LYYSIEVPENLEALPLFTLRATDQDAGDNGRINYKITAGDPSGDFRLDGQSGVLSTSRPL 1807
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I D P V + V ++ND+ P Y A+I+E+
Sbjct: 1808 DREKRPGYSLTVIAQDQGHPPLSSTATVEVIVLDINDHSPQFQSSSYTAEILEDVPIGSL 1867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P+ ++ Y +S G+ +S F ID +G +
Sbjct: 1868 VLEVKAIDLDHGPNSQVLYFLSHGS-QSMFMIDQNTGRI 1905
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y+ V + +Q+VNDN+P Y A I E Q PI+Q+AA D D + +++Y I +
Sbjct: 2144 YMAVNLILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAADDRDQGQNGQVTYSIRSS 2203
Query: 126 NPESYFNIDIGSGSL 140
+ F ID +GS+
Sbjct: 2204 SMSGLFKIDPLTGSV 2218
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V + NDN P+ Y + E + I+ L+A+D D P+ + Y IS+G+
Sbjct: 2574 IIISVTDANDNPPVFSRTEYSVILSEGTAAGTEILHLSATDPDSAPNSEVRYSISSGDET 2633
Query: 129 SYFNIDIGSGSL 140
+ F++D +G+L
Sbjct: 2634 NLFHVDQWTGAL 2645
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 5 PVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
P+ YA + QS +V++ A D D + RI+YK G YF ++ + +
Sbjct: 688 PLSYAVSLSTQSAPGTSVVRVTAYDPDSGKNGRITYKTVPGGASPYFTLNKDTGVISLSR 747
Query: 64 QVY--------LIVYIQ-----VQNVNDNV-----------PMTLDPVYYAQIVEN--QS 97
VY +++ Q V VN V P+ YY + E+ +
Sbjct: 748 SVYGKANSVIPMVISAQDGGGLVALVNARVNISVVAGLVAPPVFEKTQYYFTVSEDVLRG 807
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ IVQ ++ G + ISY IS+G+P YF +D +G+L
Sbjct: 808 TVVGIVQASSKTGT---SRDISYTISSGDPAGYFTVDPDTGAL 847
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ + V + NDN P+ + P + ++E+Q ++ + A D D + R++Y+I +GN
Sbjct: 1523 VTARVYVTDENDNPPVFISPTAVS-VMEDQPVGFVVLYVMARDADQGENGRVTYRIQSGN 1581
Query: 127 PESYFNIDIGSGSL 140
F+++ +GSL
Sbjct: 1582 TAGTFSLNPSTGSL 1595
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 22/115 (19%)
Query: 31 LDPDQRISYKIS-----AGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
LD ++R +Y +S G+P+ DQ+ L I VQ++NDN P+
Sbjct: 213 LDREKRSTYTLSLEAFDGGSPKR-------------TDQMTL--DITVQDINDNAPVFNQ 257
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
Y+A I EN I+Q+ A+D D + + Y+I+ +P+ YF ID +G
Sbjct: 258 SRYHAIISENLQPGSNILQVFATDVDEGDNGMVLYEINRRQSDPDRYFVIDSRTG 312
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 22/127 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y + E + I+ L+A+D D P+ + Y IS+G+ + F++D + L
Sbjct: 2593 YSVILSEGTAAGTEILHLSATDPDSAPNSEVRYSISSGDETNLFHVDQWTGALRLQRPLN 2652
Query: 60 GGPDQVYLIVY---------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+LIV I+V+++NDN P + A I ENQ +
Sbjct: 2653 SETQLSHLIVVQATDGQGHFALAPVSIEVKDINDNRPFFPLNLVTASIRENQPQNALVTM 2712
Query: 105 LAASDGD 111
L A D D
Sbjct: 2713 LHAIDHD 2719
>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
Length = 3260
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
+ AQI ENQ I+Q+ ASD D + ++Y G E F I+ + +
Sbjct: 1615 FEAQIRENQPAGTSIIQVTASDRDHGTNGLVTY---GGVTEDGFTINAETGVISATRVLD 1671
Query: 60 ---------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG P+ V+I V + NDN P Y ++ EN + +
Sbjct: 1672 RELQDHYTITVYAKDGGIPPNFAKAKVHITVLDENDNAPAFGLQQYSLEVPENLQPV-EL 1730
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D+ R+ YKI AG+P+ F +D SG+L
Sbjct: 1731 FTLKATDRDIGESGRLEYKIKAGDPDGDFRLDGSSGAL 1768
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------------- 50
++E+Q ++ + A D D + R+SY+I +GN F
Sbjct: 1514 VMEDQPVGFVLLYVMAWDADQGENGRVSYRIQSGNTAGRFVLSSNSGSLSILKPLDREEQ 1573
Query: 51 ---NIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
N+ I ++ G P ++ IQV +VND P + AQI ENQ I+Q+
Sbjct: 1574 ESYNLTIVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFERNEFEAQIRENQPAGTSIIQVT 1633
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + ++Y G E F I+ +G
Sbjct: 1634 ASDRDHGTNGLVTY---GGVTEDGFTINAETG 1662
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V + +Q+VNDN P Y + E Q PI+Q+ A D D + +++Y I +
Sbjct: 2111 FMAVNLILQDVNDNRPRFQLQNYVTYMHEAQGYDFPIIQVVAEDVDQGQNGQVTYTIESS 2170
Query: 126 NPESYFNIDIGSGSL 140
N F ID +GS+
Sbjct: 2171 NQSGLFKIDPQTGSI 2185
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 29/128 (22%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQ 72
E S + +VQ A D LDP+QR+ ++A +
Sbjct: 1464 EETSSLFLVVQ--AMDSALDPNQRLWGSVTA--------------------------RVF 1495
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
V + NDN P+ P + ++E+Q ++ + A D D + R+SY+I +GN F
Sbjct: 1496 VTDENDNAPIFSSPTAVS-VMEDQPVGFVLLYVMAWDADQGENGRVSYRIQSGNTAGRFV 1554
Query: 133 IDIGSGSL 140
+ SGSL
Sbjct: 1555 LSSNSGSL 1562
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++N+ + G P + + I V +VNDN P+ Y + E + I+++
Sbjct: 2519 SHYNLTVSVSDRGVPQRSSSVPAIITVTDVNDNPPVFGRAEYIVALSEGAAAGAEILRVT 2578
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D P + Y IS+G+ F++D +G++
Sbjct: 2579 ATDPDSAPYAEVQYSISSGDDMKLFSVDQWTGAM 2612
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 29/149 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNID------------------------I 54
++Q+ A D D P+ I Y I S+F ID +
Sbjct: 454 VLQVTARDKDQGPNGDIRYSILPDKKTHSSWFTIDPVTGIITTATKLDYETIPKPSIKVV 513
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+D P +V I +Q+ NDN P+ Y I EN S +++ A D D
Sbjct: 514 ATDGGRPPLSSTAVVEIDLQDTNDNEPVFGSSFYNVSIKENTSEGTCFLEVKADDADGGS 573
Query: 115 DQRISYKISAGN---PESYFNIDIGSGSL 140
I+Y I +G+ P S F+I+ SG +
Sbjct: 574 FGTITYSIGSGSVSAPLSQFSINKESGQI 602
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN---PESYFNIDIGS------- 56
Y I EN S +++ A D D I+Y I +G+ P S F+I+ S
Sbjct: 547 YNVSIKENTSEGTCFLEVKADDADGGSFGTITYSIGSGSVSAPLSQFSINKESGQICTST 606
Query: 57 --DLTGGPDQVYLIVYIQ--------------VQNVNDNVPMTLDPVYYAQIVENQSGI- 99
D G D + V ++++NDN P + P+ YA + QS
Sbjct: 607 ALDRDEGADSFHFTVTATDGGGLSSSASVLVSLEDINDNRP-SFYPLNYAVSLSTQSSPG 665
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D + R++Y +G S+F ++ +G
Sbjct: 666 TSVIRVTAHDPDAGANGRVTYHTVSGGGSSFFTLNKDTG 704
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYF---------------------NIDIGSDL 58
P++ + A+D D + ++SY++ + + ++ ++ I +
Sbjct: 2351 PVITVTATDRDSGENGKVSYRVLSSTRDGFYVDPKNGTLFIRQKAKFDPEEPSVSIVIEA 2410
Query: 59 TGG---PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P V +Q+ +VNDN P+ Y A + E+Q I+ L A DGDL +
Sbjct: 2411 RDGGSPPLSSSATVQVQLMDVNDNAPIFHQLEYKATVSEDQLPGATILTLEAVDGDLSQE 2470
Query: 116 QR-ISYKISAGNPESYFNID 134
+ I++GN + F I+
Sbjct: 2471 NSGFDFAIASGNVGNAFQIE 2490
>gi|347543905|gb|AEP02525.1| CDH23, partial [Eonycteris spelaea]
Length = 3276
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 991 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFRVGYRDAVVRTVVNL 1050
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1051 DRETTAAYTLVLEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1105
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + SG L
Sbjct: 1106 DIPEGHSIVQLMATDADEGEFGRVWYRILHGNHGNNFRIHVSSGLL 1151
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 530 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 589
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 590 YSIVNASAFGSYFDISIYEG 609
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1525 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRVSGEIATRPAPP 1584
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1585 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINA 1644
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F+ID +G
Sbjct: 1645 SLITIQALDLDEGPNGTVTYAIVAGNIINTFHIDRHTG 1682
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1490 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1549
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1550 GINSVLSYYITEGNEDMTFRMDRVSGEIA 1578
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I I
Sbjct: 558 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISIYEGYGVISVSH 617
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 618 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 677
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 678 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 720
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN + F I + S L
Sbjct: 1099 YEASVPEDIPEGHSIVQLMATDADEGEFGRVWYRILHGNHGNNFRIHVSSGLLMRGPQPL 1158
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1159 DREQDSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1218
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y+I +G E F ID +G
Sbjct: 1219 SVIVVRATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 1255
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1807 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHIL 1866
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+ GN E F I+ +G
Sbjct: 1867 ASDADSGCNALLTFNITTGNRERAFAINATTG 1898
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A D D + +SY++ G P F I+
Sbjct: 887 FVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMRVGMPRMDFLINGSSGVVVTTTELD 946
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P VY + E+ +
Sbjct: 947 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1006
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F +
Sbjct: 1007 VWLNCTDNDVGLNAELSYFITGGNVDGKFRV 1037
>gi|344242100|gb|EGV98203.1| Cadherin-23 [Cricetulus griseus]
Length = 1508
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 876 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 935
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---- 95
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 936 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 995
Query: 96 ----QSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+GI P +QL A+D D R+ Y+I GN + F I I SG L
Sbjct: 996 HSIVQAGITPPSLFLQLKATDADEGEFGRVWYRILHGNHGNNFRIHISSGLL 1047
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 415 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 474
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 475 YSIVNASAFGSYFDISVYEG 494
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1385 VASDCGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1444
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1445 GINSVLSYYITEGNEDMTFRMDRISGEIA 1473
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 30/153 (19%)
Query: 15 QSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------- 60
Q+GI P +QL A+D D R+ Y+I GN + F I I S L
Sbjct: 1000 QAGITPPSLFLQLKATDADEGEFGRVWYRILHGNHGNNFRIHISSGLLMRGPRPLDRERN 1059
Query: 61 --------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQL 105
GP + + V + V++VND P+ Y + +GI ++ +
Sbjct: 1060 SSHVLMVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVV 1119
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D ++Y+I +G E F ID +G
Sbjct: 1120 RATDRDTGDGGLVNYRILSG-AEGKFEIDESTG 1151
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 443 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 502
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 503 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 562
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 563 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 605
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 772 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGLPRMDFVINSTSGVVRTTAELD 831
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 832 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 891
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 892 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 922
>gi|54013406|dbj|BAD60792.1| protocadherin1-alpha-av3-vCP [Danio rerio]
Length = 938
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQL 105
S+F+I I +DL P Y + +QV +VNDN P +L+PV I N +G PI+ L
Sbjct: 421 SHFDITITATDLGQPPLSSYRTLSVQVSDVNDNPPEFSLNPVELYMIENNAAGA-PILML 479
Query: 106 AASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
+A D DL+ + ISY+I GN S+ N++ +G++
Sbjct: 480 SAFDKDLNENAIISYQIIKGNGSQSDLTSFLNVNSETGAV 519
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAG 125
L + + V +VNDN PM VY + + EN Q G L ++++ ASD D P+ +SY
Sbjct: 227 LNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTL-VLKVMASDSDYGPNGEVSYSFGGD 285
Query: 126 NPESYFNI 133
N ++ F+I
Sbjct: 286 NSDNIFHI 293
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---------------- 48
P+Y A + E+ +++ A+D D + ++Y ++AG ES
Sbjct: 547 PLYNATVSEDMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRT 606
Query: 49 --------YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y I + + GG V IV +QV +VNDN P+ +P Y +++ I
Sbjct: 607 PLDRETAPYLEIPVIATDRGGLSTV-AIVRVQVTDVNDNRPI-FEPRKYNVTLKSDGPIQ 664
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
PI++L A+D D+ +++Y+I+ GN F+ID +G L
Sbjct: 665 GPILRLVATDLDVGLFGQVAYRITNGNEAGVFHIDRNTGEL 705
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 59 TGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T GPD + Y+ V ++V +VNDN P+ Y A ++E +V+L+ASD D +
Sbjct: 2158 TSGPDPLEAYVKVVVKVSDVNDNPPIFTQTQYSATVLEGNVKGDFVVKLSASDADQGMNS 2217
Query: 117 RISYKISAGNPESYFNI 133
RI Y I GNP++ F I
Sbjct: 2218 RILYHIVDGNPDNAFTI 2234
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + L V + VQ+VNDN P+ Y A I EN + P++ + A+D D +
Sbjct: 197 LDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAENATVGTPVLAVNATDSDAGDN 256
Query: 116 QRISYKISA--GNPESYFNIDIGSG 138
RI Y I+ + E F ID +G
Sbjct: 257 GRIEYSINRRQSDREEMFRIDPETG 281
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + + Y + G+ N+ GS + P + V I V++VNDN P L+ ++
Sbjct: 2545 LDRETKDKYVLRLGSKNE--NMTTGSLVGDEP----VTVIITVEDVNDNYPRFLEDLHQV 2598
Query: 91 QIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDIGSGSL 140
I EN + + L A D DL + Y+I++GN F +D +G++
Sbjct: 2599 SIKENAARGTTVAMLRAKDDDLAGSVAANLVYEITSGNDGGLFRVDKTTGAV 2650
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y A ++E P++++ A+D D + I Y + ++F ID S D
Sbjct: 447 YEAHLLEASEPGTPVLKVTATDLDEGANSAIKYSLFNS---TWFVIDETSGLISTRTHVD 503
Query: 58 LTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P + L+ V + V ++NDN P+ P+Y A + E+
Sbjct: 504 CEADPAPILLVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSEDMPVGSCF 563
Query: 103 VQLAASDGDLDPDQRISYKISAGNPES 129
+++ A+D D + ++Y ++AG ES
Sbjct: 564 LKVQATDPDCGVNAMVNYTLAAGRMES 590
>gi|198421140|ref|XP_002120840.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
Length = 2746
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 39/164 (23%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI---------DIGS 56
Y A + E+ S I+ + A+D D D I Y+I +GN F I +G
Sbjct: 1765 YEASVSESASRDFSIINVTATDADYSRDNNVIMYRIISGNTGGAFKIRTLNGPGKQTLGE 1824
Query: 57 DLTGG------PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVE 94
G D+ +LIV I V++VNDN P YY ++ E
Sbjct: 1825 LCVAGDLDRETTDRYFLIVAAIDQGTPSLSSNATVVINVRDVNDNRPRFNKTSYYGRVAE 1884
Query: 95 NQSGIL-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
N+ G P++QL A + DL+ D +KI AGN ++ F +
Sbjct: 1885 NRIGEAPGPPKPVLQLYAEEDDLNSD--FKFKIIAGNDDNAFEL 1926
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 31 LDPD--QRISYKISAGNPES-YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDP 86
+DPD + + K A NP+S FN++I + G P +V + V +Q+ +VN+N P
Sbjct: 1704 IDPDTGEITTNKSEALNPQSSVFNLEIEAFDHGVPPRVQSVSVRVQITDVNNNPPTFSRS 1763
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
Y A + E+ S I+ + A+D D D I Y+I +GN F I +G
Sbjct: 1764 QYEASVSESASRDFSIINVTATDADYSRDNNVIMYRIISGNTGGAFKIRTLNG 1816
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y VYIQ+Q+ NDN P +Y ++ E+Q + ++ + A+D D + + + Y IS+G
Sbjct: 1425 YATVYIQLQDENDNSPRFTQDIYSIRVWEDQQPGIFVMPVLATDADSENNGWVRYFISSG 1484
Query: 126 NPESYFNIDIGSGSL 140
N ++ F ++ +G L
Sbjct: 1485 NLDNSFELEPVTGYL 1499
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 32/160 (20%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--------SYFNID--------- 53
+ E++ PI Q++A D D + R+ Y I + + SYF++D
Sbjct: 785 VAEDEPVGFPISQISAEDADAGTNGRVVYSIVSVTSDIGRSIEEMSYFHVDPNTGVLTVA 844
Query: 54 ---------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
SDL P Y + I V +VND P Y A+++E QS
Sbjct: 845 KQLDYERSKTHFINVSASDLAPQPQTTYQMFTIHVTDVNDIAPHFERETYEAEVIEGQSI 904
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ A D D + ++Y++ + F ID +G
Sbjct: 905 GTIVTRVTALDEDSGENGIVTYELQPSSETEAFLIDPTNG 944
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 29/160 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPDQVY 66
+I E+ G + +AASD D + R++Y IS GN F+++ S +T D+
Sbjct: 1010 EIPEHMDGPQVVHTIAASDDDAGDNGRVTYSISGGNIGGDFSLNPSSGELSITRRLDRES 1069
Query: 67 LIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
Y I V + NDN P + Y Q+ E + ++ +
Sbjct: 1070 TSSYQLQVVASDNGEPVRSASGLIDITVLDWNDNDPQFTETAYSGQVEEGLTKGQYVLTV 1129
Query: 106 AASDGDLDPDQRISYKISAGNPES-----YFNIDIGSGSL 140
A+D D+ + +SY IS ES F++D +G L
Sbjct: 1130 RATDADIGLNGEVSYFISTTATESNVLSGQFSVDTMTGVL 1169
>gi|57528983|ref|NP_001009587.1| protocadherin 2 alpha a 3 precursor [Danio rerio]
gi|54013408|dbj|BAD60793.1| protocadherin1-alpha-av3 [Danio rerio]
Length = 934
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQL 105
S+F+I I +DL P Y + +QV +VNDN P +L+PV I N +G PI+ L
Sbjct: 421 SHFDITITATDLGQPPLSSYRTLSVQVSDVNDNPPEFSLNPVELYMIENNAAGA-PILML 479
Query: 106 AASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
+A D DL+ + ISY+I GN S+ N++ +G++
Sbjct: 480 SAFDKDLNENAIISYQIIKGNGSQSDLTSFLNVNSETGAV 519
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAG 125
L + + V +VNDN PM VY + + EN Q G L ++++ ASD D P+ +SY
Sbjct: 227 LNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTL-VLKVMASDSDYGPNGEVSYSFGGD 285
Query: 126 NPESYFNI 133
N ++ F+I
Sbjct: 286 NSDNIFHI 293
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ E+ ++ +AA D D D I Y + AG + F+I D G+ T P
Sbjct: 1028 VHQGQVQEDSPLGTQVMVVAAHDDDSGLDGEIQYFLRAGTDLAAFSINQDTGAIQTTAPL 1087
Query: 63 DQVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ ++ VYI+V +VNDN P PV+Y + E+
Sbjct: 1088 DREFISYYWLTVLAVDKGSVPLSSVTEVYIEVTDVNDNPPRISRPVFYPSVREDAPLNTS 1147
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D + ++++ I++GN +F I +G L
Sbjct: 1148 VLQLDAWDPDSSSNGKLTFNITSGNHMGFFVIHPLTGLL 1186
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 4 DPVYYAQI-----VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
DPV Y+ + N+ G+ + Q + G L + + Y+ + ++ ID+ +
Sbjct: 2713 DPVIYSLVQGTTPESNKDGVFSLDQ---NTGVLKVKKAMDYEST-----KWYQIDVMAHC 2764
Query: 59 TGG-PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ D V L+ + IQV++VNDN P+ Y A + EN ++Q+ A+D D D
Sbjct: 2765 SHKDTDLVSLVSINIQVKDVNDNRPIFEADPYKAFLTENMPVGTTVIQVTANDQDTGSDG 2824
Query: 117 RISYKIS---AGNPESYFNIDIGSG 138
R+SY+++ N F ID SG
Sbjct: 2825 RVSYRLAVDPGSNVHELFAIDSESG 2849
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
QIVE+ S I Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2302 QIVEDGSDISKFFQINGSTGEMSTAQELDYEA-----QQHFHMKVRAMDRGDPPLTGETL 2356
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR----ISYKISA 124
V + V ++NDN P P Y A + E + ++++ A LDPD R + Y I +
Sbjct: 2357 VVVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQA----LDPDSRDTSCLEYLILS 2412
Query: 125 GNPESYF 131
GN + +F
Sbjct: 2413 GNQDRHF 2419
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P FN D +
Sbjct: 2166 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFNTDFKTGVLTVTGP 2222
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D ++ + V + V+++NDN P VY + E P
Sbjct: 2223 LDYESKTKHIFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGLPAQTP 2282
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2283 VIQLLASDRDSGQNRDVSYQIVEDGSDISKFFQINGSTGEM 2323
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------------- 56
I+E+ S + LAA+D D + ++ Y I+ GN E F+I++ +
Sbjct: 716 ILEHVSVNTSLAHLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLSVSAPLDYEAT 775
Query: 57 ----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
DL P + ++ + V + NDN P Y I E+ I +L
Sbjct: 776 SFYILNITVYDLGTPPKSSWKLLTVNVIDWNDNAPRFPPGGYQVTISEDAEVGSTIAELK 835
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R+ Y + + P F++ +G L
Sbjct: 836 AKDADSEDNGRVRYTLLS--PTEKFSLHPLTGEL 867
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL-----PIVQLA 106
GS++ G V ++VYI + NDN P L P + QI E S ++ P V +
Sbjct: 1724 GSNMAGASTDVMVLVYII--DENDNAPKFLKPTFVGQISEAAPLHSMVMDENNSPFV-IH 1780
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + + YKI +F ID G+L
Sbjct: 1781 AIDSDKEANSLLVYKILDPEALKFFKIDPSMGTL 1814
>gi|347543907|gb|AEP02526.1| CDH23, partial [Myotis altarium]
Length = 3209
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAMVRTVVNL 1048
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1049 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1103
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN ++F I + G L
Sbjct: 1104 DIPEGHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLL 1149
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+AGN + F +D I ++T P
Sbjct: 1523 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITAGNDDMTFRMDRISGEITTRPAPP 1582
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1583 DREHQSFYHLVVTVEDEGTPPLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTIDA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A D D P+ ++Y I AGN F+ID +G
Sbjct: 1643 SLVTIQALDLDEGPNGTVTYAIIAGNIIDTFHIDRHTG 1680
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 25/157 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
P+Y + EN + ++ + A+D D+ +SY S +P+ F++D + L
Sbjct: 453 PLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVSYFFS-DDPDR-FSLDKDTGLIMLIAK 510
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG ++ V I V +VNDNVP Y + EN+ + +
Sbjct: 511 LDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQL 570
Query: 103 VQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
V+L A+D D P+ +I+Y I +A SYF+I + G
Sbjct: 571 VRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEG 607
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1488 VASDRGTPPRKKSHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+AGN + F +D SG +
Sbjct: 1548 GINSVLSYYITAGNDDMTFRMDRISGEI 1575
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1805 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHIL 1864
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ SG
Sbjct: 1865 ASDADSGCNALLTFNITAGNRERAFTINATSG 1896
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN ++F I + L
Sbjct: 1097 YEASVPEDIPEGHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLLVRGPQPL 1156
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1157 DREQDSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1216
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D I+Y+I +G E F ID +G
Sbjct: 1217 SVIVVKATDRDTGDGGLINYRILSG-AEGKFEIDESTG 1253
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 885 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTTELD 944
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 945 RERIAQYQLRVVATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1005 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1035
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 556 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYAVISVSR 615
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VE+
Sbjct: 616 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVESIM 675
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I SG L
Sbjct: 676 AGATVLILNATDLDRSREYGQESIIYSLEGSSQFRIGARSGEL 718
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D + ++Y + G E
Sbjct: 2485 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGSNGEVTYSLE-GPGE 2543
Query: 129 SYFNIDIGSG 138
F++DI SG
Sbjct: 2544 EAFHVDIDSG 2553
>gi|156383974|ref|XP_001633107.1| predicted protein [Nematostella vectensis]
gi|156220172|gb|EDO41044.1| predicted protein [Nematostella vectensis]
Length = 1096
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-----------PDQVYLIV 69
I+ + A+DGD + ++Y ISAGN E +F+I+ + TG DQ L V
Sbjct: 473 ILTVFATDGDAGANGTLTYSISAGNEEGFFSIN---NKTGAISVAKQLDRETRDQYTLTV 529
Query: 70 Y----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
IQV + NDN P+ D V + E + P+ + ASD D+
Sbjct: 530 MAQDGGEPPLNSTTAVAIQVGDANDNPPVIQDAVIQVSLSETAAIDTPVATVIASDKDIG 589
Query: 114 PDQRISYKISAGNPESYFNI-DIGSGSL 140
+ R+ Y I +G +F I D SG++
Sbjct: 590 ANGRLMYSIESG-AHGHFQIKDSSSGAI 616
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + ++ V + V ++ND+ P P + + E + I+ + A+DGD + ++
Sbjct: 431 GGTVKGFVKVTVNVLDINDDRPSFQSPSFNVSVNEIERLGTVILTVFATDGDAGANGTLT 490
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y ISAGN E +F+I+ +G++
Sbjct: 491 YSISAGNEEGFFSINNKTGAI 511
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 15 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-GSDLTGGPDQVYLIVYIQV 73
QS P ++ +S GDL ++ + + + G+ + F ++ SD G Q L ++ +
Sbjct: 89 QSNAHPWFRINSSTGDLIVNKTLDRE-AMGSGDGSFRFEVYASD--GSSPQGSLRAFLTI 145
Query: 74 QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++NDN P + E+ P+V + A+D D + I++ I +GN F+I
Sbjct: 146 IDINDNAPAFQNTPLTKSCSEDTPVGFPVVTVTATDADATTNAIITFVIVSGNEGEAFSI 205
Query: 134 DIGSGSL 140
D +G +
Sbjct: 206 DKVTGDI 212
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S FN+ I +D +G P + IQ+ NVN++ P+ P Y I E IV+++
Sbjct: 4313 SVFNLTIEADDSGLPSLTATAALTIQIGNVNEHAPVFSQPEYEVSIYETAGLGTSIVRVS 4372
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D R+SY + GN F +D SG
Sbjct: 4373 ASDADDGSSGRVSYSLVEGNENGTFAVDAVSG 4404
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y A +VEN ++ + A+D D+ + ++Y +S + S FNID S ++TG D
Sbjct: 1423 YEASVVENSPTGTSVLTVKATDDDIGSNGAVTYSLSPSS--SLFNIDNTSGVLEVTGSLD 1480
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQS-GILP 101
+ VY + V + NDN P +Y A + E+ + G
Sbjct: 1481 REKQSVYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSLYAAGVSESVAVGSTV 1540
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V ++A+D D + ++ Y I GN FN+D + SL
Sbjct: 1541 PVTVSATDADAGANGQLIYSIVGGNINGAFNLDSATASL 1579
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A I EN S + + A+D D + +SY I +GN + F +D
Sbjct: 6206 YLASIAENASVGDLVFTVRANDADEGTNGLVSYSIRSGNRDGQFTVDHSNGQIAVLKPLD 6265
Query: 54 -----------IGSDLTG-GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ SD P V IQV + NDN P+ + EN +
Sbjct: 6266 REAVNSYVLTILASDFASVNPMSSSATVSIQVLDSNDNAPVFATKSQRVDLFENVTVGTL 6325
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D DL + ++Y I G+P+ F ID +G+L
Sbjct: 6326 VALVNATDRDLGLNGVVAYMIETGDPDGRFLIDSVTGAL 6364
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
V+ + EN + + + ASD D + +SY I AGN + F I+ +G+ L
Sbjct: 1316 VFTTSVDENVAIGTSVFAVVASDDDSGLNAIVSYSIVAGNSDFAFVINSTSGELTVGNSL 1375
Query: 59 TGGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y + V + + +VNDN P Y A +VEN
Sbjct: 1376 DREKTSSYRLTVTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANYEASVVENSPTGT 1435
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+D D+ + ++Y +S + S FNID SG L
Sbjct: 1436 SVLTVKATDDDIGSNGAVTYSLSPSS--SLFNIDNTSGVL 1473
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ +++ V +VND P+ + Y A I EN S + + A+D D + +SY I +GN
Sbjct: 6185 ITIFVTVTDVNDEAPLFTEASYLASIAENASVGDLVFTVRANDADEGTNGLVSYSIRSGN 6244
Query: 127 PESYFNIDIGSGSLG 141
+ F +D +G +
Sbjct: 6245 RDGQFTVDHSNGQIA 6259
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-- 63
VY A + E+ ++QL ASD D+ + +I++ + +G+ FN+ G L +
Sbjct: 1109 VYRAVLNESAGVGFSVLQLTASDPDVGTNGQIAFSLVSGDIGD-FNLSAGGLLKTARNLD 1167
Query: 64 ----QVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Q Y +V ++V + NDN P+ +A + EN + +
Sbjct: 1168 YERRQTYHLVVQVEDFGFPQHSGTAAVTVEVLDENDNAPVFNTTTVFADVPENVATGTVV 1227
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
L A+D D + ISY I +GN E F D
Sbjct: 1228 ETLKATDRDSGSNGDISYSIVSGNSEGKFVAD 1259
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P Y A I+EN + ++ + A D D + + Y++S+GN
Sbjct: 4019 VVVNITDVNDNAPEFTRRTYSASILENSTVGQFVLSVQAEDVDSGANGLVRYELSSGNVG 4078
Query: 129 SYFNIDIGSG 138
F+ID SG
Sbjct: 4079 GTFSIDAVSG 4088
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y A + EN + ++++ A+D D+ ++++I+ GN E F ++ + + G D
Sbjct: 10424 YSALVYENATIGEFVLRIGATDDDVTA-ANLTFEITGGNSERNFALNSKTGALTVNGSLD 10482
Query: 64 Q-------VYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ V +I + + + +VNDN P + I E S I
Sbjct: 10483 REKQDSFNVTVIAKEDKRPSVMANTTIEVALIDVNDNKPRFAVSMVTKTISETMSVGAEI 10542
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VQ+ A+D D + +SY I GN F +D +GS+
Sbjct: 10543 VQVPATDADSGANGIVSYSIVTGNARDVFAVDSANGSV 10580
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 31 LDPDQRISYK-ISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
LD ++ +SY+ + S F GG + V I V + NDN P+ V
Sbjct: 9965 LDREKVVSYRLVVEAETRSSF---------GGVAAASVEVNITVLDANDNSPIA-SVVGN 10014
Query: 90 AQIVENQS---GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
A + N S G+L I Q+ ASD D P+ ++ Y+IS+GN FN+
Sbjct: 10015 ASVQLNSSSPVGVL-IAQILASDNDAGPNGKLLYRISSGNFLESFNV 10060
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P Y+A + E P++ + ASD D+ + ++Y+I GN S
Sbjct: 5975 VVVDDVNDNSPQFNASSYFASLSEGGGANRPVITVLASDSDVGENGSVTYQIVGGNSGST 6034
Query: 131 FNI 133
F +
Sbjct: 6035 FAL 6037
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 14 NQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
N SGI+ + +G LD D RI + ++A S F V +V +
Sbjct: 3566 NSSGIIRV------NGSLDRDTESRIVFAVNAQESRSPFRTA----------SVPALVTV 3609
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
+ +VNDN P+ Y + + EN + +AASD D + +++++I G+ F
Sbjct: 3610 TLLDVNDNSPVFNQSAYISAVSENALPGRIVTIVAASDADSGSNAKLTFRIIDGDRNDVF 3669
Query: 132 NIDIGSG 138
+I SG
Sbjct: 3670 SIGSTSG 3676
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 24/134 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------------DLT---- 59
+ ++ A D D + ++++ I++GN F++D S DLT
Sbjct: 8272 LAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQLSIVRSLDRETKKNYDLTVAVS 8331
Query: 60 --GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P ++ I V +++DN+P+ +Y A E+ IV ++A+DGD +
Sbjct: 8332 DSGVPSLSSTTVLKINVTDIDDNIPVFNQTIYNASASEDAGLGNSIVTVSATDGDRGVNA 8391
Query: 117 RISYKISAGNPESY 130
+I Y I++G+ S+
Sbjct: 8392 KILYAITSGDQGSF 8405
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 7 YYAQIVENQSGILPIVQLAASD-----------GDLDPDQRISYKISAGNPESYFNIDIG 55
+ Q + SGI +++ + +D GDL + + + A + +D G
Sbjct: 8484 FSVQATDADSGINSLIRYSLTDASSTFTIDHRFGDLSTLKTLDRETQASYNLTVLAVDSG 8543
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
S G V I+ +VNDN P V+ ++ EN + ++ L+A+D D +
Sbjct: 8544 SPRLTGTATVAAILL----DVNDNAPTFTQSVFVGRVEENATLGSSVLLLSATDRDTGLN 8599
Query: 116 QRISYKISAGNPESYFNI-DIGSGSL 140
+++ I +G+ + F + D+ SG L
Sbjct: 8600 ADVTFSILSGDEDGAFRLSDVTSGLL 8625
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------- 49
+ + E+ S I + A+D D + + Y+I GN ES
Sbjct: 6523 FTVDVKESVSLTSVIASVKATDSDSGLNGDVVYEIVGGNEESVVAVNRSTGALTVVRSLD 6582
Query: 50 ------FNIDIGSDLTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ I + G P + Y V + V++VNDN P+ Y +I E
Sbjct: 6583 RERTDQYRFRIKATDLGSPPSLPAYAFVNLTVEDVNDNPPVFDRSSYQTRITEGTDVGSI 6642
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ASD D + ++Y I +GN + F I SG +
Sbjct: 6643 VASVSASDADSGSNGIVTYSIVSGNKLNVFEIVASSGEI 6681
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 33/164 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT----- 59
VY + E+ + I+ + A+D D + +++Y+I GN + F +D + +LT
Sbjct: 8151 VYNVSLREDSVVGIRIITVVAADNDTGVNGQLAYRILTGNDNNTFFLDELSGNLTLRKSV 8210
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVP---MTLDPVYYAQIVENQS 97
G Q V I V++ NDN P + D +++ + S
Sbjct: 8211 DYEMRTLYSIVVEAKDGSLHGSLQSTATVVITVEDKNDNTPQIETSQDVLFFPE----NS 8266
Query: 98 GILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ P++ ++ A D D + ++++ I++GN F++D SG L
Sbjct: 8267 PVGPVLAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQL 8310
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 34/162 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
Y A + E+ + ++Q+ A D D + ++ Y ++A +P + F ID +
Sbjct: 897 YVASVGEDLAVGRTVIQVTAKDRDSGRNGQVRYSLTAASP-TIFQIDAFTGSITLLSSLD 955
Query: 56 SDLTGGPDQVYLIVYIQ-------------------VQNVNDNVPMTLDPVYYAQIVENQ 96
+ TG + + V+ + V ++NDN P+ VY A + E+
Sbjct: 956 RETTG---EYNMTVFARDDAASAELRQSSSASVVVQVLDINDNAPLFQKAVYTATVSESF 1012
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
S +VQ+ A+D D + +SY GN F I+ +G
Sbjct: 1013 SVGTSVVQVKATDLDTGLNALVSYSFVNGNVGQAFGINSSNG 1054
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + ++NDN P +DP+ A + N + IV + A+D D + ++S+ I +GN
Sbjct: 9577 VTVTIADINDNTPQ-VDPLTTAFVPFNATVGSHIVVIQATDPDAGVNGKLSFSIVSGNSA 9635
Query: 129 SYFNIDIGSGSL 140
+F I+ +G +
Sbjct: 9636 QFFAINSSTGEI 9647
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGD-----LDPDQRISYKISAGNPESYFNIDIGS--- 56
P Y + E S + +++A+DGD D + Y +G+P+ F++D S
Sbjct: 2330 PKYDFSVKEGVSIGTEVGKVSAADGDSSLGLFGSDGFVEYSKFSGDPDGIFSVDASSGSI 2389
Query: 57 --------DLTGGPDQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQ 91
+ G P V + V ++ +++VNDN P+ + Y
Sbjct: 2390 VTNTSLDREAPGVPTSVLVRVEASNRNASPALSAVVPVFVTIEDVNDNSPVFDEAAYVFN 2449
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E + + +++A+D D + +I Y ++ P F I SG+L
Sbjct: 2450 VTEMAAAFTVLGRVSATDKDSGSNGQILYSLT---PSGVFQIGRSSGTL 2495
>gi|332834375|ref|XP_507839.3| PREDICTED: cadherin-23 [Pan troglodytes]
Length = 1422
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 1040 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1099
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1100 DRETTAAYTLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1159
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1160 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1200
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDN+P Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 579 GGGEETTGRVRINVLDVNDNMPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 638
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 639 YSIVSASAFGSYFDISLYEG 658
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 607 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 666
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 667 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYFVSVVENIM 726
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 727 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 769
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 936 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 995
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 996 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1055
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1056 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1086
>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Xenopus (Silurana) tropicalis]
Length = 2766
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
VE SGI+ ++ LD + + Y+++ + +D G L P + V +
Sbjct: 779 VEYTSGIVRTLR------QLDRENVVEYRLTV------YAVDKGHPL---PHRTPAEVLV 823
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
V +VNDN P+ ++ EN P+ ++ A+D D P+ +I Y+I GN F
Sbjct: 824 TVLDVNDNAPVFAREELEVKVFENSPLGPPLARITATDPDEGPNAQIMYQIVEGNIPEVF 883
Query: 132 NIDIGSGSL 140
+DI SG L
Sbjct: 884 QLDIFSGEL 892
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y + EN ++ + A+DGD + I+Y++ +G E F ID S +
Sbjct: 212 YRETVRENMEVGYEVMTVRATDGDSLGNANIAYRLISGGRE-VFEIDPRSGVIRILGPVD 270
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I +Q+ NDN P + Y A++ E+ S
Sbjct: 271 REEIASYQLVVEANDQGHDPGPRSSTATVHITIQDENDNAPQFSEKRYVARVSEDSSIES 330
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+D D + + Y I +GN F+ID +G++
Sbjct: 331 QLLVVTATDCDQGANAAVHYSILSGNSRGLFSIDPLTGAI 370
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A++ E+ S ++ + A+D D + + Y I +GN F+ID
Sbjct: 318 YVARVSEDSSIESQLLVVTATDCDQGANAAVHYSILSGNSRGLFSIDPLTGAIFLAGTLD 377
Query: 54 --IGSDLT--------GGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G + T G P V +V IQV +VNDN P + + A ++EN
Sbjct: 378 FETGREYTLRVRAQDGGRPPLSNVTGLVIIQVLDVNDNAPNFVSGPFQASVLENAPIGYS 437
Query: 102 IVQLAASDGDLDPDQRISYKISA 124
++Q+ A D D + R+ Y +S
Sbjct: 438 VLQVQALDADSGDNARLDYCLSG 460
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 26/141 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y + E+Q +V ++A+D D + RI+Y G P+ + + G+ T
Sbjct: 630 YTVSVKEDQPAGTTVVVISATDEDTGENARIAYLAEEGLPQFAIDPETGAVTTTMELDYE 689
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P+ Y + E+ +
Sbjct: 690 DQVSYTLAVTAHDHGIPQKSDTTYL--EILVIDVNDNPPVFQRASYKGSVPEDSPPYTSV 747
Query: 103 VQLAASDGDLDPDQRISYKIS 123
+Q++A+D D + RI Y +
Sbjct: 748 LQVSATDRDSGLNGRIFYTFA 768
>gi|351712831|gb|EHB15750.1| Cadherin-23 [Heterocephalus glaber]
Length = 3280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 37/172 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 915 VYNVSVSEDVPREFRVVWLNCTDNDMGLNAELSYFITEGNVDGKFSVGYRDAMVRTVVGL 974
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---- 95
D G V+I + +VNDN P+ L Y A I E+
Sbjct: 975 DRETTAAYTLVLEAIDNGPVGKRHTGTATVFITILDVNDNRPIFLQSSYEASIPEDIPEG 1034
Query: 96 ----QSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+GI P ++QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1035 HSIVQAGITPSLALLQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1086
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
P+Y + EN + ++ + A+D D+ +SY S +P+ F++D + L
Sbjct: 379 PLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVSYFFS-DDPDR-FSLDKDTGLILLITR 436
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG ++ V I V +VNDNVP+ Y + EN+ + +
Sbjct: 437 LDFELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPIFQKDAYVGALRENEPSVTQL 496
Query: 103 VQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSG 138
V+L A+D D P+ +I+Y I +A SYF+I + G
Sbjct: 497 VRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEG 533
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE-------------------------SYFNIDIG 55
+ A D D P+ ++ Y + +G+P +++N+ I
Sbjct: 1689 VWTFLAHDRDSGPNGQVEYSVVSGDPLGEFVISPVEGVLRVRKDMELDRETIAFYNLTIC 1748
Query: 56 SDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ G P ++V I+V ++NDN P+ L+ I EN + + ASD D
Sbjct: 1749 ARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVTHILASDADSGC 1808
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ +++ I++GN E F I+ +G
Sbjct: 1809 NALLTFNITSGNWERAFRINATTG 1832
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
+ A+++E + + Q+ A D D + ++Y++ G P F I+ S +
Sbjct: 811 FMAEVLEGIPAGVSVYQVVAIDLDEGLNGLVTYRMQVGMPRMDFLINSSSGVVVTATKLD 870
Query: 59 ---------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+G P + + I+V +VND P VY + E+ +
Sbjct: 871 RERIAEYQLRVVASDSGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 930
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 931 VWLNCTDNDMGLNAELSYFITEGNVDGKFSV 961
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGS--------- 56
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 482 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 541
Query: 57 --DLTGGPD-QVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P+ +YL V I+V + NDN P P Y+ +VEN
Sbjct: 542 PLDYEQIPNGLIYLTVMAKDAGNPSLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 601
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 602 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEI 644
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1424 VASDCGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTVVVQVRATDRDI 1483
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1484 GVNSILSYYITEGNEDMTFRMDRISGEIA 1512
>gi|198433098|ref|XP_002120736.1| PREDICTED: similar to FAT tumor suppressor 1 [Ciona intestinalis]
Length = 4828
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 47 ESYFNIDIGSDLTGG-PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E ++ + I + G P + V ++V N+NDN P+ P+++A I EN +VQ+
Sbjct: 1033 ERFYWLTIKATDRGAIPLSGTMFVLVEVGNINDNAPIATQPIFFASIRENSPLGSQVVQV 1092
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D D D I Y++S N +YF I+ +G
Sbjct: 1093 HAVDLDGDHDT-IQYRMSVNN--TYFKINTSTG 1122
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
I+++Q+ +VNDN P+ Y + E+ S L ++Q++A D + ++ Y I+ GN
Sbjct: 3212 ILHLQILDVNDNPPIFDLNQYNTEFREDASVGLVVLQVSAHSIDSGANAKLRYSITHGNE 3271
Query: 128 ESYFNIDIGSGSL 140
F I+ SG +
Sbjct: 3272 HGKFVINQDSGEI 3284
>gi|383864729|ref|XP_003707830.1| PREDICTED: neural-cadherin-like [Megachile rotundata]
Length = 1849
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
+Y A++ EN+ ++ + A D D RI Y+I++GN F + G+ G
Sbjct: 178 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNVGGAFAVKNMTGAIYVAGAL 235
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
+ Y V I V++VNDN P+ P Y+ QI E LP +
Sbjct: 236 DYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFKRPNYWTQITEEDDRSLPKRV 295
Query: 103 VQLAASDGDLDPDQRISY-----KISAGNP-ESYFNIDIGSGSL 140
+++ A+DGD D I Y I NP S F+I+ SG +
Sbjct: 296 LEVIATDGDKDRPNNIVYFLTGQGIDPDNPANSKFDINRTSGEI 339
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 49/180 (27%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY-----KISAGNP-ESYFNID--- 53
P Y+ QI E LP ++++ A+DGD D I Y I NP S F+I+
Sbjct: 277 PNYWTQITEEDDRSLPKRVLEVIATDGDKDRPNNIVYFLTGQGIDPDNPANSKFDINRTS 336
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P +Y+
Sbjct: 337 GEIYVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPTFPQGIYF 396
Query: 90 AQIVENQSGILPIVQLAASDGDLDP----DQRISYKI-------SAGNPESYFNIDIGSG 138
+ EN + + ++ + A D D DP + R++Y I G+P F ID G+G
Sbjct: 397 GNVTENGTSSMVVMTMTAVDYD-DPAESSNARLTYSIEKNVIEEETGSP--IFQIDPGTG 453
>gi|326673295|ref|XP_003199825.1| PREDICTED: protocadherin gamma-C4-like [Danio rerio]
Length = 792
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQL 105
S+F+I I +DL P Y + +QV +VNDN P +L+PV I N +G PI+ L
Sbjct: 421 SHFDITITATDLGQPPLSSYKTLSVQVSDVNDNPPEFSLNPVELYMIENNAAGA-PILTL 479
Query: 106 AASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
+A D DL+ + ISY+I GN S+ N++ +G++
Sbjct: 480 SAFDKDLNENAIISYQIIKGNGSQSDLTSFLNVNSETGAV 519
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAG 125
L + + V +VNDN PM VY + + EN Q G L ++++ ASD D P+ +SY
Sbjct: 227 LNITVIVLDVNDNRPMFSHDVYSSTVHENVQLGTL-VLKVMASDSDYGPNGEVSYSFGGD 285
Query: 126 NPESYFNI 133
N ++ F+I
Sbjct: 286 NSDNIFHI 293
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-----------DI 54
VY A I EN + + ++ AS G+ Q + Y I +GN S F+I D
Sbjct: 2077 VYNATIKENSGAGILVTKVEAS-GEAGSRQSVVYTIFSGNENSLFSINHHTGEIRVQKDY 2135
Query: 55 GSDLTGGPDQVYLIVY-------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P ++L+V I + +VNDN P Y + E Q+
Sbjct: 2136 ALDFELSP-HIHLVVLADNGLQTTHCRVSIHLLDVNDNAPRFERSSYRTAVWEGQAHNTY 2194
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++Q+ ASD D + +I Y I +G+P F +D G L
Sbjct: 2195 VMQMFASDADSGINGQIEYSIVSGDPNEAFILDSVRGILA 2234
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 35/171 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIG--------- 55
VY I E+ ++ L+A D D P + + Y I+ GN E F +++
Sbjct: 2490 VYSLTIPEDTPTDATLLTLSAEDQDWSPANTHLDYAITQGNEERRFCLEVRLVPIENQWR 2549
Query: 56 -------------------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
SD P +V + V + NDN P+ Y+A
Sbjct: 2550 NVGKLVLCNALDRETTDSYVLTVSVSDRGDPPLNSSAVVMLTVADRNDNAPVFSSTEYHA 2609
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
Q+ E+ +VQ++A D DL + + + I +GN + ++ +D SG L
Sbjct: 2610 QVSESSPRGTRLVQVSARDPDLGANSLVRFDIISGNSKGHYKLDPESGLLA 2660
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P L + I V + NDN P+ Y+A + E+ + P+ Q+ A+D DL + RI+Y+
Sbjct: 210 PRTGTLQLRIHVLDENDNPPVFNQTEYHASVPEDAPLMSPVCQVHATDLDLGDNGRITYE 269
Query: 122 ISA--GNPESYFNIDIGSG 138
I+ +P+ F+I+ SG
Sbjct: 270 INRRQSDPDRVFSINRTSG 288
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF-NIDIGSDLTGGP-------DQVYLIVY-- 70
++ ++A+D D P+ I+Y++ + + ++ D G+ T P + ++L+V
Sbjct: 2400 VLSVSATDRDSGPNGEITYRLLSSPLQGFYIQADSGAIFTNKPIKATANGNLIHLLVEAK 2459
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP-D 115
+Q+ + ND+VP VY I E+ ++ L+A D D P +
Sbjct: 2460 DGGDPALSSVASVDVQILDTNDHVPTFHQEVYSLTIPEDTPTDATLLTLSAEDQDWSPAN 2519
Query: 116 QRISYKISAGNPESYFNIDI 135
+ Y I+ GN E F +++
Sbjct: 2520 THLDYAITQGNEERRFCLEV 2539
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 37/169 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
Y+AQ+ E+ +VQ++A D DL + + + I +GN + ++ +D
Sbjct: 2607 YHAQVSESSPRGTRLVQVSARDPDLGANSLVRFDIISGNSKGHYKLDPESGLLAVNQSLD 2666
Query: 55 ---------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G + + + +V+I V + NDN P + ++EN
Sbjct: 2667 YEQDPKYILTVRASDGGEFSEKHQVAFAVVFITVLDENDNSPHFVFSTVNCSVLENLPAF 2726
Query: 100 LPIVQLAASDGDLDPDQRISYKI--------SAGNPESY--FNIDIGSG 138
+ A D DL +++Y I +G+PE F ID +G
Sbjct: 2727 THTCSVHAVDNDLGSYGQLTYSILSPCFLDYDSGSPEKKEAFAIDPLTG 2775
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
++V +VND P+ VY A + EN+ P+ +++A+DGD + + + Y + G
Sbjct: 1645 VEVADVNDQPPVFSQSVYNASVAENKDPGEPVARVSATDGDSEENAVVWYSLLPGPGYEL 1704
Query: 131 FNIDIGSG 138
F+I+ +G
Sbjct: 1705 FSINPDTG 1712
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 35/163 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E +++++A D D P+ R++Y ++ + + F++D
Sbjct: 1871 YQASVSEGLPPGAEVLRVSAFDPDEGPNGRVTYSLTEDSSQGAFSVDSLTGVIRTTGPLD 1930
Query: 54 -----------IGSD-LTGGPDQVYLIVYIQVQNVNDNVPMT----LDPVYYAQIVENQS 97
+ +D T GP V +QV++VNDNVP+ ++ A+ + NQ
Sbjct: 1931 RESRAQYTLRAVATDGCTQGPLTSVASVTVQVEDVNDNVPICDQNPVNAWVSARTLPNQI 1990
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I + +S + E+ F+I+ +G +
Sbjct: 1991 ----VATVTAEDSDQGENGTIQFALS--DEENLFDINRETGEI 2027
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 28/148 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP------DQVYLIV--- 69
++QL A D D P+ + Y I N + +I+ S L T P +Q++ +V
Sbjct: 466 LIQLQARDADEGPNGAVRYSILRSNQDRLVSIEPESGLVATAAPLDRESLEQLWFLVVAA 525
Query: 70 -------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+QV +VNDN P+ +Y A + E+ + +Q+ A+D D
Sbjct: 526 DGGEPSLSSTATVTVQVLDVNDNEPVFQRQLYGASVPEHSAVGSCFLQVVATDADSPAFG 585
Query: 117 RISYKISAG----NPESYFNIDIGSGSL 140
+ Y +S G + F++ SG L
Sbjct: 586 TLLYSLSDGFDGQDQHPLFHVHPQSGEL 613
>gi|61162140|dbj|BAD91058.1| At-cadherin [Achaearanea tepidariorum]
Length = 2971
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
+Y A++ E++ ++ + A D D RI Y+I+ GN F + + G+ GP
Sbjct: 1301 LYEAEVNEDEDIQHTVITVTAKDKD--ESSRIRYEITQGNIGGAFAVKNETGAIYVAGPL 1358
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
++ + V I +++VNDN PM P Y QI E LP +
Sbjct: 1359 DYESRKEYKLRLVASDNLNENHTTVVIHIKDVNDNPPMFDRPTYETQITEEDDRNLPKRV 1418
Query: 103 VQLAASDGDLDPDQRISYKISA 124
+Q+ A+DGD D I Y ++
Sbjct: 1419 LQVTATDGDRDRKPDIVYFLTG 1440
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 44/177 (24%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA--------GNPESYFNIDI 54
P Y QI E LP ++Q+ A+DGD D I Y ++ N + N
Sbjct: 1400 PTYETQITEEDDRNLPKRVLQVTATDGDRDRKPDIVYFLTGQGVDDQDPANSKFAINTTT 1459
Query: 55 GS---------DLTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYY 89
G DL G Q V+ + ++++NDN P +Y
Sbjct: 1460 GEIYVLKPLDRDLPHGRSQWRFTVFAEDEGGNGLVGYADVLVNLKDINDNSPFFPYAIYT 1519
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISAG----NPESYFNIDIGSG 138
+ EN + + ++ + A+D D DP++ R+ Y I N E F ID +G
Sbjct: 1520 GNVTENGTAGMTVMTMTATDYD-DPNEGMNARLKYSIEQNQVNENGELIFTIDEETG 1575
>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
Length = 3366
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+V+L +D D + +SY I+AGN + F++ + +
Sbjct: 1018 VVRLNCTDNDAGLNAELSYFITAGNQDGKFSVGFRTGVVRTVVGLDRETQASYRLVIEAI 1077
Query: 59 ----TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG VY++V +VNDN P+ L Y ++EN I+Q+ A+D D
Sbjct: 1078 DNGPAGGRRTGTATVYVEVLDVNDNRPIFLQNSYETSVLENIPRGTSILQVQATDADQGE 1137
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
+ ++ Y+I +GN F++D SG
Sbjct: 1138 NGKVLYRILSGN-NGQFSMDSLSG 1160
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
+I E Q G + + A+D D + ++ Y I+AG+ +
Sbjct: 1756 EITEGQPGPR-VWTVKATDADSGSNGKVEYSITAGDLKNEFVISSVEGELRVRKDIELDR 1814
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+Y+NI I + G P ++V I V ++NDN P+ L+ + E + I+
Sbjct: 1815 ETIAYYNITITAKDLGTPSLNATVVVGILVLDINDNDPILLNLPANTSVSEGAAVQTFII 1874
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q+ A D D + ++Y I+AGN + F I+ SG
Sbjct: 1875 QVRAQDSDSGRNALLTYSITAGNSDGAFYINETSG 1909
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ + I V +VNDN P+ Y ++EN+ +++ A+D D P+ ++
Sbjct: 542 GGGEETTGRLRINVMDVNDNAPVFQKEAYTGSLMENEQAPQQVIRARATDEDSPPNNILT 601
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y I A S+F+I I G
Sbjct: 602 YSIIYASQFRSFFSISIAEG 621
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGPD-- 63
Y + EN G ++++ A+D D+ + +SY I+AGN + F +D + ++ P
Sbjct: 1536 YNVSVSENVGGGTSVLRVVATDRDIGANAMLSYYITAGNQDLTFRMDRMTGEIVTRPSPP 1595
Query: 64 -----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Q Y + V++++ + NDN P + Y ++ E + +
Sbjct: 1596 DREKQQQYTLTVTVEDDGTPTLSTSTTVWVRIIDENDNAPEFPEEEYVTELREGPNTVGA 1655
Query: 102 IVQLAASDGDLDPDQ----RISYKISAGNPESYFNIDIGSGSL 140
I+ + +DPD+ I Y IS GN F I+ +G +
Sbjct: 1656 IIATVTA---IDPDEGLNGTIRYAISKGNLAQTFQINSVTGQI 1695
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+ + +VNDN P+ P Y + EN G ++++ A+D D+ + +SY I+AGN +
Sbjct: 1518 VNIVDVNDNPPVLQSPRGYNVSVSENVGGGTSVLRVVATDRDIGANAMLSYYITAGNQDL 1577
Query: 130 YFNIDIGSGSL 140
F +D +G +
Sbjct: 1578 TFRMDRMTGEI 1588
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VND P VY + E+ +V+L +D D + +SY I+AGN +
Sbjct: 987 ITVLDVNDETPTFFPSVYNVSLEESVPRDYLVVRLNCTDNDAGLNAELSYFITAGNQDGK 1046
Query: 131 FNIDIGSG 138
F++ +G
Sbjct: 1047 FSVGFRTG 1054
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F IDI SG +
Sbjct: 1256 RQFAIDITSGQVA 1268
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ FNI+ +G +
Sbjct: 2707 IVNGNMENSFNINHATGEI 2725
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F IDI S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F +D +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVVDPNTG 3248
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------F 50
Y+ ++EN ++ L A+D D + I+Y + + + + + F
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQGFLDF 3258
Query: 51 NIDIGSDLT----GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
LT PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3259 ETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVG 3318
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3319 EVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ FNI+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSAVDKDSGPNGQLDYEIVNGNMENSFNINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSPLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDI 2801
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|301605224|ref|XP_002932249.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Xenopus
(Silurana) tropicalis]
Length = 2977
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ EN S I+Q+ A+D D + + Y I +GN + F NID+ L
Sbjct: 429 YVVQVPENVSPNSHILQVQATDRDKGNNAIVYYSIVSGNIKGQFYIHSFTGNIDVIHPLD 488
Query: 60 ----------------GGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P +V +QV +VNDN P+ + + A ++EN
Sbjct: 489 YEAIREYSLRIKAQDGGRPPLSNTTGMVTVQVVDVNDNAPIFVSTPFQATVLENVPIGYS 548
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A+D D + RI Y+++ P F I+ +G
Sbjct: 549 VVHIQANDADSGDNARIQYRLTDTPPNFPFVINNNTG 585
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--PESYFNIDIGSDLT----- 59
Y I EN ++ + A+DGD + + Y++ G+ + F ID S +
Sbjct: 320 YRENIRENLEVGYEVMTIRATDGDALSNANMLYRLLGGSEGASAVFEIDPRSGIVRTRAP 379
Query: 60 ---------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GP VYI V++ NDN P + Y Q+ EN S
Sbjct: 380 VDREAVADYQLIVEANDQGKDPGPKSATATVYIYVEDENDNYPQFTEKRYVVQVPENVSP 439
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + + Y I +GN + F I +G++
Sbjct: 440 NSHILQVQATDRDKGNNAIVYYSIVSGNIKGQFYIHSFTGNI 481
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y + E++ IV ++A+D D + RISY + P+ + D G+ T
Sbjct: 742 YTVSVSEDKPIGTSIVTISATDEDTGENARISYTMEDNIPQFRIDPDTGTITTLIELDYE 801
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D Y V I + + NDN+P + Y + E+ +
Sbjct: 802 DQASYTIAVTAKDNGIPQKSDTTY--VEILILDANDNMPQFMRDRYVGSVFEDVPLSTSV 859
Query: 103 VQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSG 138
+Q++A+D D + R++Y GN + F I+ SG
Sbjct: 860 LQISATDRDSGLNGRVTYTFQGGNDGDGDFKIEPTSG 896
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
+ A ++EN +V + A+D D + RI Y+++ P F I+ + ++L
Sbjct: 535 FQATVLENVPIGYSVVHIQANDADSGDNARIQYRLTDTPPNFPFVINNNTGWITVSTELD 594
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
++Y V I V +VNDN P + Y+ ++ E+ + +
Sbjct: 595 RETVELYTFGVEARDQGEPAMTSSASVTITVLDVNDNNPTFTEKAYHLRLNEDAAVGSSV 654
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D++ ++Y+I++GN + F I SG
Sbjct: 655 LTMTAVDRDVN--SVVTYQITSGNTRNRFAITSQSG 688
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN---------PES--------- 48
Y + E+ ++Q++A+D D + R++Y GN P S
Sbjct: 845 YVGSVFEDVPLSTSVLQISATDRDSGLNGRVTYTFQGGNDGDGDFKIEPTSGIIRTNAKL 904
Query: 49 ------YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+N+ + + G P + + + + V ++NDN P+ + EN
Sbjct: 905 DRENVPVYNLKVYAVDRGNPSLKSPVDILVTVLDINDNAPVFKSNELDIYVEENSPVGSV 964
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ ASD D + +I Y+I GN F +D+ SG L
Sbjct: 965 VARITASDPDEGTNAQIMYQIVEGNNPEVFQLDLFSGDL 1003
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 12 VENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGPDQVYLI- 68
VE S + +V ++ ASD D + +I Y+I GN F +D+ S DLT D Y +
Sbjct: 955 VEENSPVGSVVARITASDPDEGTNAQIMYQIVEGNNPEVFQLDLFSGDLTALIDLDYEVK 1014
Query: 69 -------------------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQL 105
V++++ + NDN P+ D + + V N+S P I ++
Sbjct: 1015 TEYVIVVQATSAPLVSRATVHVKLLDKNDNDPVLQDFEIIFNNYVTNKSNSFPTGVIGKI 1074
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D+ + Y GN + +D +G L
Sbjct: 1075 PAYDPDV--SDTLHYSFIQGNELNLLILDPSTGEL 1107
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ ++ EN+ I+ ++A+DGD P+ I YKISAGN ++ F +
Sbjct: 2594 HQVRVPENEPVNTTILTVSATDGDDGPNGMIRYKISAGNEKNEFFVHSITGAVTILEPLD 2653
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+DL Q I+ + V ++NDN P VY A + EN +
Sbjct: 2654 YDLVQEYKLNITATDLGFEAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDSFV 2713
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A D D I YKI G + +F I +G +
Sbjct: 2714 YKVIAKDIDSPKYAVIEYKILGGTGKDHFRIREDTGEI 2751
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 1643 YSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTISEDGGVIRVAKNLN 1702
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D S++ P V I V ++NDN P+ LD Y A ++EN
Sbjct: 1703 FERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVLDINDNAPVFLDSPYLAHVMEN--- 1759
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 1760 MVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 1806
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L Y A + E ++ + A D D+ P + + SY I GN F +D
Sbjct: 2907 LQSAYDATVSEGAVHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNIGQAFKVDPQTGDIET 2966
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q V+I++ ++NDN P+ P + EN+
Sbjct: 2967 AKQLDRETIPVYDLTIGAIDTGSPPQTGTAAVHIELMDINDNGPIFDPPEVVGYVNENEP 3026
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
I+ L+A+D DL P+ +YK+ G +D +G L
Sbjct: 3027 AGTIIMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLDKHTGVL 3070
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 21 IVQLAASD-GDLDPDQRISYKISAGNPESYFNID----------------IGSDL----- 58
+VQL A D D + ISY + N YF+ID +G+
Sbjct: 2501 VVQLVARDDADFGVNAEISYFLVNVNGSEYFSIDEKSGWVYIQNALANVRVGTTFLLKVR 2560
Query: 59 ---TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
G P D+V L + I +N + P + ++ EN+ I+ ++A+DGD
Sbjct: 2561 AIDKGVPPQKDEVSLTLVISGEN--KHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDD 2618
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ I YKISAGN ++ F + +G++
Sbjct: 2619 GPNGMIRYKISAGNEKNEFFVHSITGAV 2646
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGGP 62
YA + EN + + D D + S +I AGN +F + + GG
Sbjct: 404 YATVDENAVKDSIVAAITVIDNDEGLNGETSVEIRAGNELGHFRLQTAATFDVVRVNGGL 463
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ + Y I V +VND+ P+ Y A + E
Sbjct: 464 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSF 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y++ +GN + +F ID +G
Sbjct: 524 VASISATDADSGLNARIYYELDSGNEQGWFAIDQDTG 560
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ ++A+D D + RI Y++ +GN + +F ID + L
Sbjct: 524 VASISATDADSGLNARIYYELDSGNEQGWFAIDQDTGLVTTIATLDREVQGSIELHVSAR 583
Query: 60 -GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GGP Y +++V + ND P V + EN + L A D D +
Sbjct: 584 DGGPSPKYASTHLKVTILDENDEAPRFSQNVVQVTLSENTPPQSLVATLTAVDNDQGTNG 643
Query: 117 RISYKISAGNPESY---FNIDIGSGSL 140
++Y + P Y F +D +G L
Sbjct: 644 SVAYSFHSSVPRDYPKTFALDGLTGQL 670
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 25/150 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------TG 60
Y Q EN + + A D D + RI Y ++ NP F + S +
Sbjct: 910 YGQTSENAAVGQEVCLARARDRDASVNARIVYSLTH-NPGEQFRVAENSGIIYLDKPIRA 968
Query: 61 GPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
P V + V + V++VND+ P+ Y + E+
Sbjct: 969 APGTVLHLEVTATDSGNPPLSAQHQVRVTVEDVNDHTPVFKLTSYETSLPESTPVNDRFF 1028
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNI 133
L A+D DL + R+ Y ++ GN E+ F I
Sbjct: 1029 SLTATDVDLGANGRVLYSVTDGNTENRFGI 1058
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + F +D
Sbjct: 575 YNVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSL 634
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + + ++NDN P+ Y+A I EN+ G
Sbjct: 635 DREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 694
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + I Y ISAG+ S F ++ SG
Sbjct: 695 ITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSG 730
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1183 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEE 1242
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1243 RQFAIDSTSGQV 1254
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + I Y ISAG+ S F ++ S +
Sbjct: 681 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSGVISTRMALD 739
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 740 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 797
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 798 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 835
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2127 VVVMVLDINDNNPVFAQAMYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVDGNAN 2186
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2187 QEFRIDSVTGAI 2198
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------ 56
A I E+ S + ++A D D + I Y IS+GN E F I+ +
Sbjct: 3083 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3142
Query: 57 -----DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++T GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3143 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTVLENAPSGTTVIH 3202
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y I + + + F ID +G
Sbjct: 3203 LNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTG 3235
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3186 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTGVVTTQGFLD 3244
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3245 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3304
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3305 GEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQI 3342
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2635 PFSSYEKLDITVLDVNDNPPVFKEDPFISEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2693
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F+I+ +G +
Sbjct: 2694 IINGNKEHSFSINHATGEI 2712
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1198 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1257
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1258 GRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1317
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1318 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1359
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID-----IGSDLTGG----------------- 61
++A+DGD + + Y I +GN +F+I + + L GG
Sbjct: 484 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGLAGGLDRELASQIVLNISARD 543
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 544 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGDLGDNG 603
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + F +D SG L
Sbjct: 604 TVRFSLQEAETDQRSFRLDPVSGRL 628
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F IDI SG +
Sbjct: 1256 RQFAIDITSGQVA 1268
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGTPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNTQSG 743
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNTQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + ASD D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y +I EN I+Q+ A+DGD + +
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQTLYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F IDI S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|443706936|gb|ELU02770.1| hypothetical protein CAPTEDRAFT_228443 [Capitella teleta]
Length = 2181
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-PESYFNID------------ 53
Y + I E+ + + P + ++A D L+ D ++Y I GN P++ F ID
Sbjct: 970 YDSIITESSTKLNPNITVSAFD--LESDAEVTYAIVGGNTPDNAFRIDPLTGELSLTRTV 1027
Query: 54 --------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + G P+QV + V I V + N+ +P +YY +I E
Sbjct: 1028 DYEETDGLGKFELIVEASDNGFPEQVSTVPVVITVIDENNRIPQFGSGIYYGRIPETSPA 1087
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+VQ+ A+D D + +I+Y+I +G+ + F ID+ SG +
Sbjct: 1088 GTSVVQVTATDSDPGRNGQITYRIHSGHLDK-FRIDVNSGEV 1128
>gi|402871012|ref|XP_003899484.1| PREDICTED: protocadherin Fat 1-like [Papio anubis]
Length = 1188
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------- 56
Q+ ENQ ++ + ++D D + ++ Y IS GN +S F ID+ +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 57 -----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
DL + ++ + V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D DL P+ ++Y I + F+ID +G
Sbjct: 845 EATDKDLGPNGHVTYSILTDTDK--FSIDSATG 875
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---------------- 46
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKITHP 882
Query: 47 -------ESYFNIDIGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
E Y I+ P ++V + +++VNDN P + P Y ++ E+
Sbjct: 883 LDRELQHEHYLKIEARDQAREEPQLFSMVVLKVSLEDVNDNPPKFIPPNYRVKVREDLPE 942
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 943 GTVIMWLEAHDPDLGQSGQVRYSL-MDHGEGNFDVDKLSGAV 983
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + F +D
Sbjct: 570 YNVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSL 629
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + + ++NDN P+ Y+A I EN+ G
Sbjct: 630 DREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 689
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + I Y ISAG+ S F ++ SG
Sbjct: 690 ITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSG 725
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1178 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEE 1237
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1238 RQFAIDSTSGQV 1249
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP 62
Y + EN G LP ++Q+ A D D + ++SY + GN ++ F + +L T
Sbjct: 2245 YSVNVPENL-GTLPRTVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSL 2303
Query: 63 DQ------VYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ V LI + + V ++NDNVP +Y+ I E+
Sbjct: 2304 DRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTD 2363
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY+I GN S F I+ +G +
Sbjct: 2364 VILVNASDIDASTNAVISYRIIGGN--SQFTINPSTGQI 2400
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + I Y ISAG+ S F ++ S +
Sbjct: 676 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSGVISTRMALD 734
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 735 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 792
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 793 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 830
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------ 56
A I E+ S + ++A D D + I Y IS+GN E F I+ +
Sbjct: 3079 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3138
Query: 57 -----DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++T GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3139 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTVLENAPSGTTVIH 3198
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y I + + + F ID +G
Sbjct: 3199 LNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTG 3231
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I Q+ A+DGD + ++ Y I GN
Sbjct: 2121 VVVMVLDINDNNPVFAQAMYKVEINENTLTGTDITQVFAADGDEGTNGQVRYGIVDGNAN 2180
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2181 QEFRIDSVTGAI 2192
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2631 PFSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2689
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F+I+ +G +
Sbjct: 2690 IINGNKEHSFSINHATGEI 2708
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3182 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTGVVTTQGFLD 3240
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3241 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIV 3300
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3301 GEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQI 3338
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1193 LKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1252
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + + ++EN
Sbjct: 1253 GRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTP-SFKSTLFVDVLENMRI 1311
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1312 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1353
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y+ I E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 2349 MYFTTIPEDAPTGTDVILVNASDIDASTNAVISYRIIGGNSQFTINPSTGQIITSALLDR 2408
Query: 60 ---------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P+ + V + V +VNDN P Y I I
Sbjct: 2409 ETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFI 2468
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +D D+ P+ + Y +S N E F+ID G++
Sbjct: 2469 FAVTVTDADIGPNSELHYSLSGRNSEK-FHIDTLRGAI 2505
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID-----IGSDLTGG----------------- 61
++A+DGD + + Y I +GN +F+I + + L GG
Sbjct: 479 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGLAGGLDRELASQIVLNISARD 538
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 539 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGDLGDNG 598
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + F +D SG L
Sbjct: 599 TVRFSLQEAETDQRSFRLDPVSGRL 623
>gi|390342985|ref|XP_798777.3| PREDICTED: cadherin-23-like, partial [Strongylocentrotus purpuratus]
Length = 3673
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY I EN PI+ + +D DL Y I AG+P F I+ ++T
Sbjct: 1399 VYEGSINENNFTSNPIITVMVNDLDLPSSNNFEYSIIAGDPMGMFEINSNGEITVSSLLD 1458
Query: 60 ------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
P + + I V + NDN P+ + V + E S +
Sbjct: 1459 REQQETYQLTIELIDQTNSPPARTTTLAIITVGDENDNTPIFAETVIRVDVTEGPSSQNI 1518
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ L A+D DL ++ I Y I + P+S+F I+ +G +
Sbjct: 1519 PVYMLTANDIDLGLNRDIIYAIGSQQPQSHFQINPETGMI 1558
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 3 LDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----IGS 56
+D +Y I EN Q+G IVQ++ +D D + ++Y I +GN + F I+ I +
Sbjct: 447 IDNIYRGSINENDQTGTF-IVQVSTTDADSGSNAAVTYSIISGNINNVFTINPTSGAITN 505
Query: 57 DLTGGPD--QVYLI---------------------VYIQVQNVNDNVPMTLDPVYYAQIV 93
GP+ Q Y + V I V +VND+ P D + I
Sbjct: 506 TQILGPNTPQTYTLSVRATNPTPGVAPATGTSTSTVIITVNDVNDSPPRFSDDEFTVFIN 565
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
E + ++ A+D D+ R++Y I+AGN +F I+ SG
Sbjct: 566 EAAQVGTTVTRITATDEDIPEGDRLTYIITAGNTGGHFQINPVSG 610
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VNDN P+ VY I EN PI+ + +D DL Y I AG+P
Sbjct: 1383 ITVTDVNDNYPIWTRNVYEGSINENNFTSNPIITVMVNDLDLPSSNNFEYSIIAGDPMGM 1442
Query: 131 FNID 134
F I+
Sbjct: 1443 FEIN 1446
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y I EN I+ + A D DL + + Y+I +GN + FN+D ++ G
Sbjct: 977 YEESIFENHPLGSNILTVQADDPDLGVNAVVLYRIISGNNNNLFNVDGQGNINLGSTPLD 1036
Query: 63 ----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILP 101
DQ +LI V I + ++ND P+ YY + EN P
Sbjct: 1037 REMQDQYFLIVQAYNSDLSVGTNEVPVIINILDINDVTPLFQQQNYYRPDLSENSPSGTP 1096
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A D DLD + Y + GNP ++ I+ +G
Sbjct: 1097 VLQVFAQDQDLDLAGDVQYSL-IGNP-NFLTINSDTG 1131
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+G P V + V +VNDN P D Y I EN I+ + A D DL + +
Sbjct: 948 SGQPMTGTATVSVIVTDVNDNAPTFRDISYEESIFENHPLGSNILTVQADDPDLGVNAVV 1007
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I +GN + FN+D G G++
Sbjct: 1008 LYRIISGNNNNLFNVD-GQGNI 1028
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 69 VYIQVQNVNDNVPMTL----DPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKIS 123
+ + V +VNDN P+ + D +Y I EN Q+G IVQ++ +D D + ++Y I
Sbjct: 428 LMVTVTDVNDNNPVFINRPIDNIYRGSINENDQTGTF-IVQVSTTDADSGSNAAVTYSII 486
Query: 124 AGNPESYFNIDIGSGSL 140
+GN + F I+ SG++
Sbjct: 487 SGNINNVFTINPTSGAI 503
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 24/130 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT-------------------- 59
+ ++ A+D D+ R++Y I+AGN +F I+ + D+T
Sbjct: 574 VTRITATDEDIPEGDRLTYIITAGNTGGHFQINPVSGDVTLLRQLDRELESQHNLTIRAT 633
Query: 60 --GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P Q + + V + NDN P Y I+EN ++Q+ A+D D +
Sbjct: 634 DQGAPPQSATTTLKVIVLDFNDNAPQWSPQSYVDSILENVPLNTFVLQVVATDADQGTNA 693
Query: 117 RISYKISAGN 126
+S+ I+ N
Sbjct: 694 DLSFTINNAN 703
>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Bombus impatiens]
Length = 4964
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V + NDNVP+ +D ++E +++ A+D DL P+ +++ ISAGN
Sbjct: 1275 VHIEVLDENDNVPLFVDDKSSISVLETTPTNTELLRFKATDNDLGPNSELAFAISAGNRR 1334
Query: 129 SYFNIDIGSGSL 140
F ID +G+L
Sbjct: 1335 DTFYIDPLTGTL 1346
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 26/146 (17%)
Query: 21 IVQLAASD-GDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLIVYIQ 72
+VQL A D D + ISY ++ N YF+ID + + L+ P + ++ +Q
Sbjct: 3020 VVQLTAKDDADFGVNAEISYFMTNVNGTEYFSIDEKSGWVYVRNTLSNVPVRTTFLLKVQ 3079
Query: 73 -----VQNVNDNVPMTL--------DPVYYA-----QIVENQSGILPIVQLAASDGDLDP 114
V D V +TL P + A ++ EN+ I+ ++A+DGD P
Sbjct: 3080 AIDKGVPPQKDEVSLTLVISGENKHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDDGP 3139
Query: 115 DQRISYKISAGNPESYFNIDIGSGSL 140
+ I YKISAGN ++ F + +G++
Sbjct: 3140 NGMIRYKISAGNEKNEFFVHSITGAV 3165
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 2162 YSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTISEDGGVIRVAKNLN 2221
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D S++ P V I V ++NDN P+ LD Y A ++EN
Sbjct: 2222 FERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVIDINDNAPVFLDSPYLAHVMEN--- 2278
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 2279 MVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 2325
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L Y A + E + ++ + A D D+ P + + SY I +GN F +D
Sbjct: 3389 LQNTYDATVSEGAAHGTRVLTVRAVDKDIKPQNNQFSYSIISGNLGQAFKVDPQTGDIET 3448
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q ++I++ ++NDN P P + EN+
Sbjct: 3449 AKQLDRETIPIYDLTIGAIDTGTPPQTGTAAIHIELLDINDNGPTFDPPEVVGYVNENEP 3508
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DL P+ +YK+ G +D +G L
Sbjct: 3509 AGTIVMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLDKHTGVL 3552
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 29 GDLDPDQRISYKISA--GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
GD+ + + YK + +PE+ +++ + + G P +VY+ V + N+N P
Sbjct: 2944 GDVFSKKTLKYKHTHRPSSPENLYSLTVVATDNGKPPLSSKTVVYVNVVDANNNAPRFDQ 3003
Query: 86 PVYYAQIVENQSGILPIVQLAAS-DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y + EN +VQL A D D + ISY ++ N YF+ID SG
Sbjct: 3004 RSYLYPVPENYGVGKRVVQLTAKDDADFGVNAEISYFMTNVNGTEYFSIDEKSG 3057
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------------- 53
+A + EN + + +A D D + + +I AGN +F +D
Sbjct: 339 FATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNTPSFDIVRVNGRL 398
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D P + I V +VND+ P+ Y A + E
Sbjct: 399 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSF 458
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y +GN + +F ID +G
Sbjct: 459 VASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTG 495
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ VY V ++NDN P+ + A IVEN + PI+ +AA D D + R+ Y ++ G+
Sbjct: 1932 VTVYCNVVDLNDNAPIFEAGPHAADIVENTTIGTPILSVAAQDLDSGDNGRVIYAVAGGD 1991
Query: 127 PESYFNI 133
F +
Sbjct: 1992 ENGDFGV 1998
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ L G LD + R +Y + D P V + V + NDN
Sbjct: 2104 PVDGLLRVSGSLDRELRSNYTLEV----------TAKDRGEPPRSSSTAVTVTVLDENDN 2153
Query: 80 VPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
P+ DP Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 2154 SPV-FDPRQYSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTI 2207
>gi|301770757|ref|XP_002920796.1| PREDICTED: protocadherin Fat 2-like [Ailuropoda melanoleuca]
gi|281339749|gb|EFB15333.1| hypothetical protein PANDA_009583 [Ailuropoda melanoleuca]
Length = 4351
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F I+
Sbjct: 1036 VHQGQVQENSPSGTQVMVVAAHDDDSGLDGELQYFLRAGTSLAAFTINQDTGMIQTLASL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V +VNDN P PV+Y + E+
Sbjct: 1096 DREFVSCYWLTVLAVDRGSIPLSSVTEVYIEVMDVNDNPPQMSRPVFYPSVREDAPLHTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNNMGFFVIHPLTGLL 1194
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSD-------- 57
Y +VEN +V L D D+ R ++ I+ G+P F I D
Sbjct: 2913 YRGSVVENSEPGELVVTLQTLDADISEQNRQVTCYITEGDPLGQFGISQAGDEWRIFSRK 2972
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q ++V I V +VNDN P +Y ++ E+ S I
Sbjct: 2973 TLDREHMAKYLLRITASDGKFQASVLVEIFVLDVNDNSPQCSQLLYTGKVSEDTSPGHFI 3032
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3033 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGEL 3069
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 34/156 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYETQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQR----ISYKISAGNPESYF 131
++++ A LDPD R + Y I +GN + +F
Sbjct: 2396 HLVLKVQA----LDPDSRDTSHLEYLILSGNQDRHF 2427
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEM 2331
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ +LAA D D + ++ Y I+ GN E F++++ + L
Sbjct: 734 LARLAAIDSDTGFNGKLVYVIADGNEEGCFDMELETGLLTVAAPLDYEATSFYILNVTVY 793
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P Y I E+ I +L A D D D +
Sbjct: 794 DLGTPRKSSWKLLTVNVKDWNDNAPRFPPGGYQITISEDTEVGTTIAELKAKDADSDDNG 853
Query: 117 RISYKISAGNPESYFNIDIGSGSLG 141
R+ Y + + P F++ +G L
Sbjct: 854 RVRYTLLS--PTEKFSLHPLTGELA 876
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2785 VNIQVKDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPVDPGS 2844
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2845 NIHELFAIDSETG 2857
>gi|432864259|ref|XP_004070252.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3342
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL------------------ 58
L +V ++ASD D + ++ Y+I++GN F+I ++G+
Sbjct: 1908 LAVVTVSASDEDEGANTKLRYQITSGNKGGAFDIEPEVGTIFIAQPLDYEQQKRYKLLVL 1967
Query: 59 -TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQ 116
+ G + Y V + V N ND P+ YY ++E G + ++Q+ ASD D D DQ
Sbjct: 1968 ASDGKWEDYAAVVVTVVNKNDEAPVFSMSEYYGSVIEELDGSPVFVLQVTASDPDKDADQ 2027
Query: 117 -RISYKISAGNPESYFNIDIGSGSL 140
I Y I ES+F I+ +G +
Sbjct: 2028 GAIRYSIHGQGAESHFMINDITGEM 2052
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
D + R SY + + + + G + D Y+ V+I +VNDN P+ +Y
Sbjct: 1841 FDREARSSYLLEVQSEDGEESARPGKNKQPNTDTAYVRVFIS--DVNDNKPVFAQRLYEV 1898
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ L +V ++ASD D + ++ Y+I++GN F+I+ G++
Sbjct: 1899 GVDEDADVGLAVVTVSASDEDEGANTKLRYQITSGNKGGAFDIEPEVGTI 1948
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
++F++ + ++ P + VY+ + +VNDNVP +Y A + E ++Q++
Sbjct: 1740 AFFSLQVRAQNVAAVPLAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQVGTSVLQVS 1799
Query: 107 ASDGDLDPDQRISYKI---SAGNPESYFNID 134
A D DL + I+Y + S+G+ F ID
Sbjct: 1800 AHDKDLGLNGEITYSLLNDSSGD-HRLFRID 1829
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +++ NVND P PVY + E+ + + A D D D I+Y I+AGN E
Sbjct: 1334 VRVRIANVNDEAPEFSQPVYRTFVSEDAGPNTLVATVLAKDPDGDG---ITYSITAGNEE 1390
Query: 129 SYFNIDIGSG 138
+ F ID G
Sbjct: 1391 ANFVIDSLKG 1400
>gi|311271345|ref|XP_001925718.2| PREDICTED: cadherin-23 [Sus scrofa]
Length = 3354
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F+I
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDHDVGLNAELSYFITGGNVDGKFSIGYRDATVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTASYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNQGNNFRIHVSNGLL 1159
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISVYEG 617
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITGGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E + I
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEILLDEGPATINA 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIINTFRINRHTG 1690
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + IV + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHIVQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITGGNEDMTFRMDRISGEIA 1586
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + + I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGHPPLNSTVPITIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A++VE + I Q+ A D D + ++Y++ G P F I+ S + T D
Sbjct: 895 FVAEVVEGTPAGVSIFQVVAIDLDEGLNGLVTYRMQVGMPRLDFLINSSSGVVLTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F+I
Sbjct: 1015 VWLNCTDHDVGLNAELSYFITGGNVDGKFSI 1045
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGLPPLSSTMLVGIRVLDINDNDPVLLNLPMNISISENSPVSSFVAHIL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I++GN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITSGNRERAFSINATTG 1906
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA---ASDGDLDPDQRI 118
P+ +V ++VQ+VNDN P+ Y ++ ENQ P V+L A+D D P +
Sbjct: 1729 PNFAKAVVRVEVQDVNDNAPVFAKMWYGLEVPENQ----PAVELCFVKATDPDSGPGGEL 1784
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
YKI+AG+P+ F + +G+L
Sbjct: 1785 EYKIAAGDPDGDFQLHSRTGAL 1806
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I + +VNDN P+ P Y + E I++L A+D D P+ + Y IS+G+ +
Sbjct: 2579 ITIGDVNDNPPVFSRPEYTVALSEGAVSGTEIIRLTATDPDSTPNAEVQYTISSGDEMNL 2638
Query: 131 FNIDIGSGSL 140
F+ID +G+L
Sbjct: 2639 FSIDQWTGAL 2648
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 11 IVENQSGILPIVQLAAS--DGDLDPDQRISYKISAGNPESYFNI-----DIGSDLTGGPD 63
I EN S + Q A DG Q ISY + +GN + F I +I + + G D
Sbjct: 2070 IQENASKGTAVAQAQAEYPDGT---RQGISYSLFSGNKKHLFKISSSTGEIWVESSNGLD 2126
Query: 64 -----QVYLIVYIQ-------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ L+V + +Q+VNDN+P Y A + E Q +PI+Q+
Sbjct: 2127 FEETPRLRLVVKAETVSSTSFMAFNLVLQDVNDNLPRFQLQNYVAFMKEAQGYEMPIIQV 2186
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + +++Y I + + F ID +GS+
Sbjct: 2187 VAEDVDQGQNGQVTYSIQSSSMSGLFKIDPVTGSI 2221
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 24/134 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-----------------------PE 47
++E+Q I+ + A D D + R+SY+I +GN +
Sbjct: 1552 VMEDQPVGFVILHVMAHDADEGENGRVSYRIQSGNNAGRFSLSPNTGSLSILKALDREEQ 1611
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FN+ I ++ G P ++ +QV +VND PM + ++EN+ ++++
Sbjct: 1612 EVFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPMFQQAEFGTHVMENKGPGTTVLKVT 1671
Query: 107 ASDGDLDPDQRISY 120
A+D D + I+Y
Sbjct: 1672 ATDRDQGSNGHITY 1685
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 60 GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P +V ++ + + V ++ND+ P+ Y+A I E+ I+Q+ A+D D + +
Sbjct: 229 GSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAADEDEGDNGLV 288
Query: 119 SYKISA--GNPESYFNIDIGSG 138
Y+I+ +PE YF ID+ SG
Sbjct: 289 LYEINRRQSDPERYFVIDLKSG 310
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
V++ NDN P+ P + ++E+Q I+ + A D D + R+SY+I +GN F+
Sbjct: 1534 VKDENDNPPVFSSPSAIS-VMEDQPVGFVILHVMAHDADEGENGRVSYRIQSGNNAGRFS 1592
Query: 133 IDIGSGSL 140
+ +GSL
Sbjct: 1593 LSPNTGSL 1600
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 24/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y + E I++L A+D D P+ + Y IS+G+ + F+ID +
Sbjct: 2594 PEYTVALSEGAVSGTEIIRLTATDPDSTPNAEVQYTISSGDEMNLFSIDQWTGALRLQRA 2653
Query: 57 -DLTGGPDQVYLI-------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D V +I V + V++VNDN P A I EN P+
Sbjct: 2654 LDREHQSTHVVIIQATDGQGYFALVPVIVDVKDVNDNHPYFPVETLTATIQENLPANSPV 2713
Query: 103 VQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
L A D D ++ Y + +G+ F I+ SG +
Sbjct: 2714 TVLHAIDHDTGVFGQLKYYMMERSGSGRDSFVIEQNSGEV 2753
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNP 127
V ++V ++NDN P T PV Y + S +V++ A+D D + RI+Y+ G
Sbjct: 666 VRVKVMDINDNRP-TFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRITYRTVPGGS 724
Query: 128 ESYFNIDIGSG 138
+F ++ +G
Sbjct: 725 SPFFTLNKDTG 735
>gi|402880536|ref|XP_003903856.1| PREDICTED: cadherin-23 [Papio anubis]
Length = 3354
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A I E
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASIPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDLDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMTFRMDRVSGEIA 1586
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1906
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDLDIGINSVLSYYITEGNKDMTFRMDRVSGEIATRPAPP 1592
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIINTFRIDRHMG 1690
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAKDAGSPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEI 728
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGTPAGVSIYQVVAIDLDEGLNSLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND +P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-------- 61
++EN ++Q+ A+D D + + Y+I AG + +F + D+ G
Sbjct: 2077 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFFIHPVTGDIRVGNATIDREE 2136
Query: 62 ----------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
P I+ I ++++ND+ P L+P+ ++E+ I +
Sbjct: 2137 QESYRLTVVATDRGTIPLSGTAIITILIEDINDSRPEFLNPIQTVSVLESAEPGTVIANV 2196
Query: 106 AASDGDLDPDQRISYKI 122
A D DL+P ++ Y I
Sbjct: 2197 TAIDRDLNP--KLEYHI 2211
>gi|397490019|ref|XP_003816007.1| PREDICTED: cadherin-23 [Pan paniscus]
Length = 3354
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYTLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMTFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y +V Y+ + + NDN PM P Y + E +
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIINTFRIDRHMG 1690
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMTFRMDRISGEIA 1586
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + +++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNAHLTFNITAGNRERAFFINATTG 1906
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
>gi|313245856|emb|CBY34844.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 31/160 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY +I EN IVQ+ A D D + ISY+IS ++ F ID +
Sbjct: 454 VYNGEIAENNEIGDTIVQITAFDPDFGKNAEISYEISEH--KNLFVIDPETADLKALVSF 511
Query: 57 DLTGGPDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D PD + + + ++++N+NDN P+ +P + EN+
Sbjct: 512 DAELFPDPISINIIATDNGSPRLSASTNFLLKIRNLNDNAPVFENPSSTISVKENKPIGT 571
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I QL A+D DL+ + + S+K S+F ID +G +
Sbjct: 572 FITQLTATDADLNDEIKYSFKTKT----SFFTIDSATGKI 607
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
I +++VNDN P VY +I EN IVQ+ A D D + ISY+IS
Sbjct: 438 IAIEDVNDNAPSFKHDVYNGEIAENNEIGDTIVQITAFDPDFGKNAEISYEIS 490
>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
Length = 4376
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + AG + F+I D G T P
Sbjct: 1061 VHQGQVQENSPSGTQVMVVAAHDDDGGLDGELQYFLRAGTSLAAFSINKDTGMIQTLAPL 1120
Query: 63 DQ----VYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ Y + VYI+V++VNDN P PV+Y + E+
Sbjct: 1121 DRESVSCYWLTVLAVDRGSIPLSSVTEVYIEVKDVNDNPPRMSRPVFYPSVREDAPLHTS 1180
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I+ GN +F + +G L
Sbjct: 1181 VLQLDAWDPDSSSKGKLTFNITGGNNMGFFVLHPLTGLL 1219
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D ++ +SY+I S G
Sbjct: 2301 VYTTSVSEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTVQ 2360
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2361 ELDYETQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2420
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2421 HLVLKVQALDPDSRDTSRLEYLILSGNQDRHF 2452
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 759 LARLAATDPDTGFNGKLVYVIADGNDEGCFDIELETGLLTVAAPLDYEATRFYILNVTVY 818
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P Y + EN I +L A D D D +
Sbjct: 819 DLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQITVSENAEVGTTIAELKAKDADSDDNG 878
Query: 117 RISYKISAGNPESYFNIDIGSGSLG 141
R+ Y + + P F++ +G L
Sbjct: 879 RVRYTLLS--PTEKFSLHPLTGELA 901
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ I+ GN +F + + L Q
Sbjct: 1165 PVFYPSVREDAPLHTSVLQLDAWDPDSSSKGKLTFNITGGNNMGFFVLHPLTGLLSTARQ 1224
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ +++ V +++ +VNDN P+ ++ ++ E S
Sbjct: 1225 LDRENKDEHILEVTVLDNGEPSLKSTSRVVVRILDVNDNPPVFSHKLFNVRLPERLSPAT 1284
Query: 101 P--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P + +L ASD D + R++Y I + E F+ID +G
Sbjct: 1285 PGPVYRLVASDPDEGLNGRVTYSIEESD-EGSFSIDPATG 1323
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---G 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++ A
Sbjct: 2810 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGNDGQVSYRLPADPGS 2869
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2870 NIHELFAIDSETG 2882
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2199 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2255
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY + E P
Sbjct: 2256 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAQTP 2315
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2316 VIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEM 2356
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------- 50
P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2407 PQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINSSSGIISMFNL 2466
Query: 51 ---NIDIGSDL-TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++D +L G D V+ VYI N N P VY A++ EN ++
Sbjct: 2467 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHVYEAELAENAKVGTKVI 2526
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2527 ELLAIDKDSGPYGTVDYTI 2545
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ R ++ I+ G+P F I +G +
Sbjct: 2938 YRGSVVENSEPGELVATLKTLDADVSEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2997
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q ++V I V ++NDN P +Y ++ E+ S I
Sbjct: 2998 TLDREHTAKYLLRITASDGKFQASVLVEIFVLDINDNSPQCSQLLYTGKVSEDISPGHFI 3057
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+Q++A+D D + + +I+Y + G F +D +G L
Sbjct: 3058 LQVSATDLDSETNAQITYSLH-GPGADEFKLDPHTGEL 3094
>gi|291387668|ref|XP_002710368.1| PREDICTED: FAT tumor suppressor 2 [Oryctolagus cuniculus]
Length = 4349
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + AG + F+I D G T P
Sbjct: 1036 VHQGQVQENSPSGTQVMLVAAHDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 63 DQVYL---------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ ++ VYI+V +VNDN P PV+Y I E
Sbjct: 1096 DREFVPFYWLTVLAVDRGSVPLSSVTEVYIEVTDVNDNPPRMHRPVFYTSIQEGVPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++G+ +F I +G L
Sbjct: 1156 VLQLEAWDPDSSSKGKLTFNITSGDHVGFFAIHPFTGLL 1194
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2276 VYTTSVSEGLPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFQINGSTGEISTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D + Y I +GN + +F I+ SG
Sbjct: 2396 HLVLKVQALDPDSKDTSHLEYLILSGNQDRHFTINSSSG 2434
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2778 DLVSLVSVNIQVKDVNDNRPVFEADPYRAFLTENMPGGTTVIQVTANDQDTGNDGQVSYR 2837
Query: 122 ISA---GNPESYFNIDIGSG 138
+S+ N F ID +G
Sbjct: 2838 LSSDPGSNIHELFAIDSETG 2857
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSDL-- 58
DP Y A + EN G ++Q+ A+D D D ++SY++S+ N F ID +
Sbjct: 2802 DP-YRAFLTENMPGGTTVIQVTANDQDTGNDGQVSYRLSSDPGSNIHELFAIDSETGWIT 2860
Query: 59 --------TGGPDQVYLIVY---------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
T Q Y++ Y + V + NDN P Y +VEN
Sbjct: 2861 TLQELDCETRQNYQFYVVAYDHGQTVQLSSQALVEVSVTDENDNAPQFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F I
Sbjct: 2921 SEPGELVATLETLDADVSEQNRQVTCYITEGDPLGQFGI 2959
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVVVEDINDNPPTFSQLVYTTSVSEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFQINGSTGEI 2331
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS------------AGNPESYFNID 53
+Y ++ E+ S I++++A+D D D + +I+Y + G ++ +D
Sbjct: 3017 LYTGRVREDASPGHFILKVSATDLDTDTNAQITYSLHGPGANEFKLDPHTGELTTFTGLD 3076
Query: 54 ---------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ GG V + V++VNDN P + +N + P+
Sbjct: 3077 RERKDIYSLVAKATDGGGRSCQADVTLHVEDVNDNAPRFFPSHCSVAVFDNTTVKTPVAV 3136
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + ++ Y ++ + E +F+ID +G
Sbjct: 3137 VFARDPDQGSNAQVVYSLT-DSAEGHFSIDATTG 3169
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D + Y I +GN + +F I+ S +
Sbjct: 2382 PQYEANVSELATCGHLVLKVQALDPDSKDTSHLEYLILSGNQDRHFTINSSSGIISMFNL 2441
Query: 59 ------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G D V+ VYI N N P VY A++ EN ++
Sbjct: 2442 CKKQLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHVYEAELAENAKVGTKVI 2501
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2502 ELLAIDKDSGPYGTVDYTI 2520
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ R ++ I+ G+P F I +G++
Sbjct: 2913 YRGSVVENSEPGELVATLETLDADVSEQNRQVTCYITEGDPLGQFGISQVGNEWRISSKK 2972
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V I V ++NDN P +Y ++ E+ S I
Sbjct: 2973 ILDREHLAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCSQLLYTGRVREDASPGHFI 3032
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G + F +D +G L
Sbjct: 3033 LKVSATDLDTDTNAQITYSLH-GPGANEFKLDPHTGEL 3069
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +L A+D D ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLVATDPDTGFSGKLVYVIADGNEEGCFDIELETGLFSVVAPLDYETTSFYILNITV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 HDLGTPQKSSWKLLPVNVKDWNDNAPRFPAGGYQLTISEDTEVGTTIAELQTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + P F++ +G L
Sbjct: 853 GRVRYSLL--TPTEKFSLHPLTGEL 875
>gi|291221760|ref|XP_002730888.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2199
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 22/130 (16%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYF-----------NID-----------IGS 56
+ IV + A+D D+DP+ I+Y I+ G+ +F NID + +
Sbjct: 1537 VAIVTVIATDADVDPNTEITYSITDGHNGEFFIDSNGTIYAVGNIDREEIALYTLTVMAT 1596
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P + V I V ++NDN P+ + Y + EN + IV+++A+D D P+
Sbjct: 1597 DNGEEPQSSTVPVDITVTDLNDNSPIFTENNYNGFVEENAQYYIKIVKVSATDADEGPNA 1656
Query: 117 RISYKISAGN 126
+ Y I G+
Sbjct: 1657 EVYYTILCGD 1666
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGILPIVQLAASDGDLDPDQRISYKI 122
+ +V I V N+NDN P+ D YY+ V + + IV + A+D D+DP+ I+Y I
Sbjct: 1501 FTVVNILVNNINDNSPI-FDRSYYSGEVGEGNYTACYVAIVTVIATDADVDPNTEITYSI 1559
Query: 123 SAGNPESYF 131
+ G+ +F
Sbjct: 1560 TDGHNGEFF 1568
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I++ +VNDN P + YY +I EN I + A+D D+D + RIS+ I G + +
Sbjct: 1099 IELLDVNDNYPQFTEAEYYYEISENTPTGSVIDVIRATDEDIDNNARISFAIHTG-ADGH 1157
Query: 131 FNIDIGSGSLG 141
F I+ +G L
Sbjct: 1158 FEINRTTGVLS 1168
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--------------PESYFNI 52
Y + EN + IV+++A+D D P+ + Y I G+ P + I
Sbjct: 1628 YNGFVEENAQYYIKIVKVSATDADEGPNAEVYYTILCGDDGDFEINMYYGIIAPTANAKI 1687
Query: 53 D--IGSDLT-------GGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D + S+ T GG + + VYIQV +VNDN P + Y +I+ N
Sbjct: 1688 DYEMKSNYTLAVQAQDGGTPSLRNVTSVYIQVIDVNDNEPTFVGEPYDVEILGNADVNTT 1747
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A D D + +I+Y + YF+I+ +G +
Sbjct: 1748 VITVVAEDADSGENGKITYTMEES---YYFDIENDTGDI 1783
>gi|156365973|ref|XP_001626916.1| predicted protein [Nematostella vectensis]
gi|156213809|gb|EDO34816.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 7 YYAQIVENQSGILPIVQ--------LAASDGDLDPDQRISYKISAGNPESYFNIDIGS-- 56
Y ++VE+ +V+ + +D D+ + RISY I +GN + F ID S
Sbjct: 59 YVVEMVEHSPTTFTVVKVGEKVVFLIKTTDRDVGSNGRISYSIVSGNVDGAFVIDSSSVI 118
Query: 57 ------DLTGGPDQVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIV 93
D P L+V I + ++NDN P L Y +
Sbjct: 119 RVVALVDREAHPAGYSLLVVARDHGYPTPNAATARVNITISDINDNAPRFLKFTYSGSVR 178
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E+++ +VQ+ A+D D I + I+ G+PE F+I SG +
Sbjct: 179 EDRTVGTEVVQVQATDDDDGLAGEIVFAITGGDPEGLFSILNTSGKI 225
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + I + + NDN P Y A + E + ++ + A++ D D +I+Y ISAG+
Sbjct: 361 LHLNISLVDANDNNPTFTKAAYTAHVSEEATAGTNVIMVNATERDSGKDSKITYNISAGD 420
Query: 127 PESYFNIDIGSGSL 140
P +F I+ +G +
Sbjct: 421 PLDHFAINHLTGQI 434
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ--------LAASDGDLD 113
P +VY++V + NDN P+ Y ++VE+ +V+ + +D D+
Sbjct: 33 PRWSAAVVYVEVLDSNDNAPVFKKQSYVVEMVEHSPTTFTVVKVGEKVVFLIKTTDRDVG 92
Query: 114 PDQRISYKISAGNPESYFNIDIGS 137
+ RISY I +GN + F ID S
Sbjct: 93 SNGRISYSIVSGNVDGAFVIDSSS 116
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+VNDN P +Y A + E Q ++Q+ ASD D + R+ Y I
Sbjct: 1874 KAYSRVAVSIQDVNDNAPCFEQSIYQASVSEGQGYNAHVIQVTASDPDSGLNGRVEYSIV 1933
Query: 124 AGNPESYFNIDIGSGSL 140
+GN F ID SG L
Sbjct: 1934 SGNQGEAFQIDALSGVL 1950
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P +IV IQV +V+DN P Y+A + E+ I ++ASD D+
Sbjct: 2287 LASDHGCPPLSSTVIVSIQVLDVDDNPPRFSSLQYHAHVKESAPPGSRITVVSASDCDMG 2346
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y++ +GN + +F ++ +G L
Sbjct: 2347 SHAEIFYQVISGNEKEHFYLEERTGVL 2373
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLT---- 59
+Y A + ENQS + ++ A+D D + ++ ++I +G +F N D G +T
Sbjct: 1379 LYEASVKENQSPGEFVTRVGATDRDSGINSKLQFEIISGASFGFFKINADTGEVVTTTTL 1438
Query: 60 -----------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + V++ ND+ P L Y +++ENQ +
Sbjct: 1439 DREVQGVFTLRVLVRDEGVPSLSCTTTILCIVEDENDHAPEFLGTSPYIEVLENQEPKV- 1497
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + ASD D + + Y I GN + F I+ SG L
Sbjct: 1498 VYTVLASDMDAGRNGAVKYHIINGNTDKSFVINETSGELA 1537
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ ++ A D D + +++Y I +GN + F +D S L
Sbjct: 1289 VHRVHARDPDEGRNGKVTYGIRSGNANAAFMLDESSGLLTIACPLDYEVKTQHILTLVAL 1348
Query: 60 --GGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + + V +VND P+ +Y A + ENQS + ++ A+D D +
Sbjct: 1349 DDGVPARSSSQTMTVTVLDVNDEAPVFKQHLYEASVKENQSPGEFVTRVGATDRDSGINS 1408
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++ ++I +G +F I+ +G +
Sbjct: 1409 KLQFEIISGASFGFFKINADTGEV 1432
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 47 ESYFNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
ES ++ + T GPD + Y+ + ++V +VNDN P+ Y A ++E +V+
Sbjct: 2229 ESSKHVLTVAARTAGPDPLEAYVKLVVKVSDVNDNPPIFTQTQYSATVLEGNVKGDFVVK 2288
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L+ASD D + RI Y I GNP++ F I
Sbjct: 2289 LSASDADQGMNGRILYHIVDGNPDNAFTI 2317
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
++ A+D D + ++Y ++AG ES D G D+ G IV +QV +VNDN
Sbjct: 615 EVRATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTG-DICGL--STVAIVRVQVTDVNDN 671
Query: 80 VPMTLDPVYYAQIVENQSGIL-PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +P Y + S I+++ A+D D +++Y+I++GN F ID +G
Sbjct: 672 RPI-FEPRRYNVTLRTDSSFQGAILRVVATDLDAGLFGQVAYRITSGNEAGVFQIDRNTG 730
Query: 139 SL 140
+
Sbjct: 731 EM 732
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + L V + VQ+VNDN P+ Y A + EN + P++ + A+D D +
Sbjct: 195 LDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASVPENATVGTPVLAVNATDSDAGEN 254
Query: 116 QRISYKISA--GNPESYFNIDIGSG 138
RI Y I+ + E F ID +G
Sbjct: 255 GRIEYSINRRQSDREEMFRIDPETG 279
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R Y + G+ + N GS + P + V + V++ NDN P + V+
Sbjct: 2630 LDRETRDKYVLRLGSRDE--NSTTGSLVGDEP----VTVIVTVEDANDNYPRFSEDVHQV 2683
Query: 91 QIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSGSL 140
I EN + + L A D DL + Y+I++GN F +D +G++
Sbjct: 2684 SIKENAARGATVAVLRAKDDDLAGTAAANLVYEITSGNDGGLFRVDRATGAV 2735
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 3 LDP-VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---- 57
DP VY A + EN + L ++Q++A+D D + R+ Y I G+ F+ IG D
Sbjct: 2191 FDPKVYSASVSENATIGLSVLQVSATDLDEGLNGRVRYTIVGGDIN--FDFHIGEDSGII 2248
Query: 58 ---------------LT-----GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
LT G D Y I + ++NDN P+ LD Y A ++E
Sbjct: 2249 RVAKNLNFERRSQYVLTIQVEDSGNDVRYDTATATITIMDINDNAPIFLDSPYIAYVMEE 2308
Query: 96 QSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +PI+ + A D D P R+ Y I G+ + F ++ +G +
Sbjct: 2309 NNRLPVPIITVQAHDADSPPYNRVRYLIKDGD-KGLFRVNGTTGEI 2353
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
++ + EN + ++Q+ +SD D+ + +Y + NP F ID + +
Sbjct: 2829 LFSVNVTENAAIGTFVIQVTSSDRDIGVNANATYSFTE-NPTGKFRIDPVSGNVTVAGVI 2887
Query: 59 TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ YL+ + I VQ+ NDN P Y E Q + + Q
Sbjct: 2888 DRESKEEYLLKVSAVDGSWRAETPLTITVQDQNDNAPEFEHSFYSFNFAELQRNVAFVGQ 2947
Query: 105 LAASDGDLD-PDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D P+ I+Y I +P +F+ID+ SG +
Sbjct: 2948 VTAADRDKQGPNAMITYSIK--HPSEFFSIDLTSGEI 2982
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 3 LDPVYYA-QIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID------- 53
+ P+Y+ Q+VE+ +V + A D D+ P + +Y I G F ID
Sbjct: 3465 VQPIYHVLQLVESAPIGTKVVTVEAVDKDVRPPNNEFTYSILGGEGSKAFRIDPRSGIIE 3524
Query: 54 ----------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVY-YAQIVEN 95
+G+ G P Q V+I +Q++NDN P+ +PV+ + EN
Sbjct: 3525 TVSLLDRERQAVYNVTVGAIDRGVPPQTGTTEVHIVIQDINDNGPV-FEPVHPVGSVFEN 3583
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+ ++ L+A D D P+ +Y I G+ + YF +D +G L
Sbjct: 3584 EPPGTSVMILSAIDADQAPNAEPFTYTIVGGDHKDYFVVDKDTGVL 3629
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGS 56
IV + ASD D P+ + Y I +GN E+ F ID +
Sbjct: 3168 IVSVTASDNDSGPNGVVHYAIVSGNEENKFLIDPNTGDISVANTLDFDTLPKFTLNITAT 3227
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D+ P + + + +VNDN P Y + EN ++ L A D D +
Sbjct: 3228 DMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRENLPPDTLVMDLEAFDADSAKNG 3287
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I Y I GN + +F ID +G
Sbjct: 3288 IIQYSIIGGNGKDFFTIDSETG 3309
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+V A+D DL + I++ I AGN F ID I +
Sbjct: 1356 LVTFQATDADLGINSEIAFSIGAGNMHDTFRIDPQLGTLYLEKHLDFEMQRSYHLNITAS 1415
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P V I + I V++ NDN P+ QI E PIV + A D D +
Sbjct: 1416 DQGNPSLVSSISFVITVEDANDNAPVFPSTAIVRQIQEGIPLNTPIVTVTAEDPDSGLNS 1475
Query: 117 RISYKISAGNPESYFNIDIGSGSLG 141
RI Y + P ++ +GS + G
Sbjct: 1476 RIRYSLIQQEP----SVLVGSSTRG 1496
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E + + ++ A+D D + I Y I+ GN + F ID
Sbjct: 1237 YKTQVSEGAAVDTQVFRVVATDADDQLNGGIFYYITEGNGDHKFRIDEASGQIVLNRALD 1296
Query: 54 ----------IGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
IG+ G P+ V I V + NDN P + +E +
Sbjct: 1297 RETSDRYTLTIGARDAGLPNLSTSTTVIIDVLDENDNAPEFMHSEAKISALETLPVGSEL 1356
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V A+D DL + I++ I AGN F ID G+L
Sbjct: 1357 VTFQATDADLGINSEIAFSIGAGNMHDTFRIDPQLGTL 1394
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + + N SG P + L + G LD + ++++ ++I + G P
Sbjct: 191 DLKFKLAVTTNPSGETPYLHLETT-GKLDRET-----------QNHYWLNISAQDGGRPA 238
Query: 64 QV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ YLIV I + +VNDN P+ Y + E+ ++Q+ A+D D + R++Y I
Sbjct: 239 LLGYLIVNITIVDVNDNPPIFDHSDYVVSLNESVPPGTHVMQVTATDNDAGENARVTYYI 298
Query: 123 SAGNPESYFNIDIGSG 138
S E+ F +D +G
Sbjct: 299 SES--ETQFAVDAETG 312
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S +N+ I + +G P + L + I V +VND+ P+ Y A + E S + +
Sbjct: 447 SKYNLTIVATDSGSPARKALAFLIIHVNDVNDHEPIFEKSEYSAVLSELVSVGSYVAGIT 506
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D + I Y I +GN + +F+ID+ SG
Sbjct: 507 ATDEDTGINSNIFYAIVSGNDQQWFDIDMVSG 538
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L V ++V + NDN P+ VY A + EN + L ++Q++A+D D + R+ Y I G+
Sbjct: 2175 LDVLVRVLDENDNSPLFDPKVYSASVSENATIGLSVLQVSATDLDEGLNGRVRYTIVGGD 2234
Query: 127 PESYFNIDIGSG 138
F+I SG
Sbjct: 2235 INFDFHIGEDSG 2246
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP---D 63
A++VEN I A D D + RI+Y ++ NP F I +G P +
Sbjct: 919 ARVVENWPANHEIYLAKAEDLDTGNNSRITYSLTL-NPHELFTISPTLGMIYLNRPLQHE 977
Query: 64 QVYL----------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Q Y +V + +++VND+ P+ Y ++E S
Sbjct: 978 QFYFESSLTLEVTATDDGSPPLSSRQLVTLNLEDVNDHTPVFEYSSYETSLLETISVNER 1037
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
L+A D D + R+SY IS GN F I
Sbjct: 1038 FFALSAMDRDKGANGRVSYFISEGNEAVKFGI 1069
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 3 LDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYF------NIDIG 55
LD Y A ++E + + +PI+ + A D D P R+ Y I G+ + I +
Sbjct: 2297 LDSPYIAYVMEENNRLPVPIITVQAHDADSPPYNRVRYLIKDGDKGLFRVNGTTGEISVL 2356
Query: 56 SDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
L Y I V I V+++ND+ P Y + +VEN
Sbjct: 2357 RSLDRETQSRYEIIVVAMDSGVPVLTGTGTVLIFVEDINDHSPEFSQSQYRSDVVENGPI 2416
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L + +++A D D + I Y++ N + F ID +G +
Sbjct: 2417 GLSVTKVSAFDNDSGENALIRYQLK--NDKDKFRIDSSTGEI 2456
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ + +VNDN P Y Q+ E + + ++ A+D D + I Y I+ GN +
Sbjct: 1218 IHVFILDVNDNAPAFSRVPYKTQVSEGAAVDTQVFRVVATDADDQLNGGIFYYITEGNGD 1277
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1278 HKFRIDEASGQI 1289
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQ 116
TG P + VY V ++NDN P+ DP+ Y+ ++ EN + ++ ++A+D D +
Sbjct: 1956 TGRPSLSSTVTVYFNVLDLNDNAPL-FDPMSYSDELYENITIGSSVITVSATDQDSGDNG 2014
Query: 117 RISYKISAGNPESYFNI 133
++ Y I GN F I
Sbjct: 2015 KLVYSIIGGNENEQFRI 2031
>gi|291230328|ref|XP_002735121.1| PREDICTED: GA26057-like [Saccoglossus kowalevskii]
Length = 3460
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 28/159 (17%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-- 65
Y ++E++ PI+ + A D D + R+ Y I GN E F I+ + + D +
Sbjct: 1748 YTYVMEDEPLGYPIMHINALDPDFGDNGRVVYNIVDGNEEGKFTIEHSTGILSLVDPLDR 1807
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
YLI+Y+ ++VNDN P+ ++ + ENQ +
Sbjct: 1808 EQRDAYGLNISASDHGVLPRVAFQYLIIYL--EDVNDNAPVFTSDMFVMDVQENQDAFIY 1865
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D+D + ++ Y I G F I+ SG++
Sbjct: 1866 LGSVNATDADIDVNGQVLYSIPNGIANDMFWINADSGAI 1904
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISY---KISAGNPESYFNI----------- 52
Y A + E+ S ++Q+AA+D D D RI+Y + +P + F+I
Sbjct: 777 YNASVFEDVSTDYCVLQVAATDPDADEFGRITYSMGHVFGISPPAEFSIRPETGWICATM 836
Query: 53 ----DIGSD--------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D G+ GG +V I + +VNDN P+ +Y + E+ +
Sbjct: 837 SLDRDRGTTSFLFPVQATDGGGLHSVTMVNINILDVNDNKPIFYPHIYAVDLSEDSAVGT 896
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ +AA+D D I+Y+I++GN + F I+ SG L
Sbjct: 897 EVISVAATDRDAGAYGLITYQITSGNENNIFTINSRSGKL 936
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 27/142 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGG-------PDQVYLI--- 68
IV ++A+DGDL + RI+Y + A F I D G T PD V +
Sbjct: 1225 IVTVSATDGDLGNNARITYTLRASQYAGNFGIFPDTGVLYTKKMLDRELVPDYVLEVIAK 1284
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V I V +VNDN P L Y+ I EN+ + ++ASD D +
Sbjct: 1285 DNGDPVQSATATVIIHVTDVNDNNPRLLHESYHFTINENEIAYSYVDTVSASDRDQGTNG 1344
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I Y I P+ F+ID +G
Sbjct: 1345 EIVYSI---QPDDTFSIDEQTG 1363
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
+E SGI+ + + D + P I+ ISA + +D G + + I
Sbjct: 2306 IEEDSGIVTVKDPSLLDRETTP--HITLTISAS---------VNTDRYG-----FTHLKI 2349
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESY 130
+ ++NDN P+ + Y AQ+ EN+ + Q+ A+D D+ + I+Y I+ P E
Sbjct: 2350 ILDDINDNPPIFIHERYSAQVWENELRNTYVTQVIATDADIGDNAVITYSITKSEPDEQD 2409
Query: 131 FNIDIGSG 138
F ID GSG
Sbjct: 2410 FIIDSGSG 2417
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--NPESYFNIDIGSDLTGGP- 62
++ + ENQ + + + A+D D+D + ++ Y I G N + N D G+ T G
Sbjct: 1851 MFVMDVQENQDAFIYLGSVNATDADIDVNGQVLYSIPNGIANDMFWINADSGAIYTNGAL 1910
Query: 63 ---------------DQVY------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGIL 100
DQ + +V + V ++ND+ P+ Y + EN Q+ L
Sbjct: 1911 DRETLGSYAVTVYANDQAFPSLFDTTLVLVNVLDMNDHAPVFAMSTYSISVPENGQTTRL 1970
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V A+D D + I Y I+ GN + F ID +G
Sbjct: 1971 HVV--VATDADTGTNAEIRYSITGGNEGNRFVIDPITGEF 2008
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNP 127
V I+V +VNDN PM + VY A + E + + ++ A+D D + ++ Y I +GN
Sbjct: 2570 VRIEVTDVNDNSPMFIPSVYEASVSEAVTKGHNVTRVHATDADYSRENNQVDYSIISGNI 2629
Query: 128 ESYFNIDIGSGSLG 141
++ F I SG +
Sbjct: 2630 DNMFEISASSGQIA 2643
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSD-- 57
M + VY A + E + + ++ A+D D + ++ Y I +GN ++ F I S
Sbjct: 2583 MFIPSVYEASVSEAVTKGHNVTRVHATDADYSRENNQVDYSIISGNIDNMFEISASSGQI 2642
Query: 58 -LTGGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVEN 95
+ G D+ L +Y I+V++ ND+ P + Y + E
Sbjct: 2643 AVLGDLDRETLALYTLIVQAADRGEPQQSNVATVNIEVEDFNDHTPEFNEEEYEGTVSEG 2702
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A+D D+ + I Y IS+GN F ID +G
Sbjct: 2703 VPVGTTILTVHATDRDIGLNAMIRYDISSGNELDLFKIDQSTG 2745
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDLT---- 59
VYYA ++E + QL SD D + I+Y+I + ++F +D S L
Sbjct: 669 VYYASVIEVADPGTSVFQLVGSDSDDSSNADITYQIIHVPNSFSNWFQVDAESGLISTAT 728
Query: 60 ------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GG P + V + +++VNDN P + Y A + E+ S
Sbjct: 729 EIDREIKPSVMLHIMAQDGGNPPLSTNVTVIVTIRDVNDNEPSFDNSFYNASVFEDVSTD 788
Query: 100 LPIVQLAASDGDLDPDQRISYKI 122
++Q+AA+D D D RI+Y +
Sbjct: 789 YCVLQVAATDPDADEFGRITYSM 811
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--G 125
++ + + + NDN P+ Y A+I E S I+Q+ A+D D + +SY I+
Sbjct: 433 LLNVTITDANDNQPVFNQSRYSARIAETASVGRSILQVHATDIDEGSNGAVSYDINRRQS 492
Query: 126 NPESYFNIDIGSGSL 140
+PE YF ++ +G L
Sbjct: 493 DPEEYFRVNSQTGVL 507
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 33/167 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPESYFNID---- 53
Y A + E++ ++Q+ A D D + +SY + AG N + F ID
Sbjct: 1419 YVANVREDEPPNSAVIQVTAKDPDSGSNGVVSYDLVAGELGYLSGIFNNQVMFTIDETNG 1478
Query: 54 --------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
+ D P + V ++V++ NDN P ++ Y +
Sbjct: 1479 MIRTRAVLDRESKSSYHLTVMARDHGNPPKEAVAFVRVEVKDENDNSPKFMNSTYAFTVQ 1538
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
EN I Q+ A+D D + + Y I G+ F I+ +G++
Sbjct: 1539 ENTPPSTNIGQVIAADRDAGNNGAVRYYIIDGDIYGTFEINHTTGNI 1585
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I +++ NDN P+ + Y ++E++ PI+ + A D D + R+ Y I GN E
Sbjct: 1731 IIIEDENDNSPLFVSRSY-TYVMEDEPLGYPIMHINALDPDFGDNGRVVYNIVDGNEEGK 1789
Query: 131 FNIDIGSGSL 140
F I+ +G L
Sbjct: 1790 FTIEHSTGIL 1799
>gi|156383896|ref|XP_001633068.1| predicted protein [Nematostella vectensis]
gi|156220133|gb|EDO41005.1| predicted protein [Nematostella vectensis]
Length = 1610
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A + E+ S L ++++ A D DL + +SY I +GN + F++D
Sbjct: 868 VYTANVSEDASPGLTVLKIRAVDNDLASNANVSYSIVSGNTGAAFHVDNVTGEIKLVSKL 927
Query: 54 -----------IGSDLTGG-PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+GS G P + +V I V +VNDN P+ L +++EN
Sbjct: 928 EREKITSYTLTVGSADGGAVPRRSTALVIIYVMDVNDNSPVCLHDTQTVRLLENLPAGHF 987
Query: 102 IVQLAASDGDLDPDQRISYKISA 124
+V++ +D D + R+ Y +++
Sbjct: 988 VVKVVTTDPDEVHNGRVEYNLTS 1010
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V + + +VNDN P+ VY A + E+ S L ++++ A D DL + +SY I +GN
Sbjct: 849 MVTVNLLDVNDNDPVFDRDVYTANVSEDASPGLTVLKIRAVDNDLASNANVSYSIVSGNT 908
Query: 128 ESYFNIDIGSGSL 140
+ F++D +G +
Sbjct: 909 GAAFHVDNVTGEI 921
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 71 IQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + + NDN P+ DPV+Y+ I EN IVQ+ AS+ D + ++ +KIS+G+P
Sbjct: 1370 ILIADENDNNPV-FDPVHYSVNISENGPSEEVIVQVNASERD---EGKLLFKISSGDPGG 1425
Query: 130 YFNI 133
YF I
Sbjct: 1426 YFTI 1429
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
++ SGI+ + +G LD +++ Y I+ E+ + S++T +
Sbjct: 372 VIGEHSGIIIV------NGTLDREKKDLYSITVIARETETSAGFHSNVT---------IT 416
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPE 128
+ +++ NDN P+ +Y + I EN+ ++Q++A+D D+ + +SY + A
Sbjct: 417 VMLRDENDNSPIFSRALYSSPIYENEPPGTFVIQVSANDSDIGSNAMVSYAVLSDAEGHY 476
Query: 129 SYFNIDIGSGSL 140
YF I+ +G++
Sbjct: 477 QYFKINAKNGTI 488
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNI-DIGSDLT--GGP 62
Y A I EN + ++Q+ A D D + ++Y I NP FNI +I ++T G
Sbjct: 227 YSASIPENAAMGSVVMQVHAKDLDKSINAPVTYAIDKETNPLRMFNIANITGEITLNGSL 286
Query: 63 DQ-----------VYLIVY-------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
D+ Y +Y I V +VNDN+P+ P Y + EN + ++Q
Sbjct: 287 DRETIAEYRLRILAYCTIYQDHTEVLITVTDVNDNIPLFTLPSYNTTVNENAAIGTYVIQ 346
Query: 105 LAASDGDLDPDQRISYKISAGNPE 128
+ A D D + Y+I+ E
Sbjct: 347 VQAEDIDQGVNASFIYEIAYAGHE 370
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 32/156 (20%)
Query: 3 LDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
DPV+Y+ I EN IVQ+ AS+ D + ++ +KIS+G+P YF I
Sbjct: 1382 FDPVHYSVNISENGPSEEVIVQVNASERD---EGKLLFKISSGDPGGYFTIHNVTGVIST 1438
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I ++ G P ++ L V I V + ND P+ + EN
Sbjct: 1439 RKPLDREMVSRFDLTITAEDEGRPSRMALGYVTIFVNDENDFAPVIEQCEQLVSVSENAH 1498
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ + A D D + +I+Y S GN S FNI
Sbjct: 1499 IGSAVASINAVDKDDPSNTKITY--SVGN--SAFNI 1530
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 32/162 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y +I EN P++ + A++ + RI Y IS G+P F+ID +
Sbjct: 941 YTIEIPENIQLHTPVLHVQANNSE---GPRIVYTISEGDPFKQFSIDFNTGVIHVIQPLD 997
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
LTG V+ V I +++VNDN P+ L Y+A + E
Sbjct: 998 FETHPAYKLSVRATDSLTGAHSDVF--VDIILEDVNDNAPVFLSKAYHANVSEASVVGTR 1055
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSLG 141
I+Q+ A D D +Q + +++ G +F ID +G++
Sbjct: 1056 ILQVDAKDSDTGNNQEVFFQLVEEKGESSDFFTIDRDTGTIS 1097
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 16 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGSDLTGGPDQVY 66
SG++ I+ +D + D +++++Y I+ G+P F I+ + L Y
Sbjct: 1690 SGVIAILSTTDADSE-DINKQVNYFITGGDPLGQFAIEHIQNEWKVFVKKPLDREEKDNY 1748
Query: 67 LI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
L+ V ++V + NDN P +Y + EN I+Q++ASD D+
Sbjct: 1749 LLNITASDGIFTAKATVEVKVLDANDNSPQCEKALYSESVPENSPAGRLILQVSASDADI 1808
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +I Y++ E F ID +G L
Sbjct: 1809 RSNAQIFYELQGAGSE-LFTIDSDTGEL 1835
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E+ S ++++ A+ D + + ISY I +GN F++D
Sbjct: 1990 YTATVSEDVSVGTQLLRVQAASRDTEANGEISYGIISGNEHGLFSVDPRTGDIFVIQPLD 2049
Query: 54 --------IGSDLTGG---PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
I + T G P V I + +VNDN P+ VY A + E+ +
Sbjct: 2050 YEASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSEDAELGKTV 2109
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + Y I GN S F ID G L
Sbjct: 2110 ITVNAEDLDGPSHSHVRYSIVDGNQGSPFTIDSARGEL 2147
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 22/154 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT----- 59
+Y + EN I+Q++ASD D+ + +I Y++ E + + D G T
Sbjct: 1783 LYSESVPENSPAGRLILQVSASDADIRSNAQIFYELQGAGSELFTIDSDTGELKTLQPLD 1842
Query: 60 ---------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG +++ V++VNDN+P +Y + EN + +
Sbjct: 1843 REEQEEHRFKMRAVDGGGRYCEADIHVVVEDVNDNLPQFSADLYTVTVFENTEIGTYVAK 1902
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D+ P+ I Y + + + +F+ID +G
Sbjct: 1903 LLANDVDVGPNSNIIYSL-LDSADGFFSIDEQTG 1935
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQS-------GILPIVQLAASDGDLDPDQRISYK 121
V +QV + NDN P+ L+ +Y ++ E + P+ ++ ASD D P+ ISY
Sbjct: 17 VIVQVLDENDNRPLFLEKIYKIKLPEREKPEKERAIKRDPVYRVIASDRDDGPNAEISYS 76
Query: 122 ISAGNPESYFNIDIGSG 138
I G+ F I+ +G
Sbjct: 77 IEEGDENGKFFIEPKTG 93
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNID--IGSDL 58
L Y+A + E I+Q+ A D D +Q + +++ G +F ID G+
Sbjct: 1038 LSKAYHANVSEASVVGTRILQVDAKDSDTGNNQEVFFQLVEEKGESSDFFTIDRDTGTIS 1097
Query: 59 T---------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
T G P +IV I V ++NDN P Y + I E
Sbjct: 1098 TAQLLDYEEIRQHELRVRAVDRGVPALSSEVIVTIDVTDLNDNAPEFTQQTYNSTISELA 1157
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q+ ASD D + + ++GN + F+ID +G++
Sbjct: 1158 PRGHFITQVQASDADSSDKDNLLFFFTSGNEDLNFSIDKHTGAI 1201
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+IV IQV++VNDN P+ Y A +VEN ++Q+ ASD D + ++ Y + A
Sbjct: 1547 VIVNIQVKDVNDNKPVFESDPYEAVVVENLPSGTQVIQVRASDQDSGTNGQVIYSLDA 1604
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +VND P+ Y A ++ + ++Q+ A+D D P+ ++ IS GN
Sbjct: 619 VTIEVTDVNDCPPVFSQKTYEATVITPTYKGVKVIQINATDSDSGPNAKLLLSISEGNIG 678
Query: 129 SYFNIDIGSG 138
F +D +G
Sbjct: 679 DKFKMDPTTG 688
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 30 DLDPDQRISYKISAGNPESYFNIDIGSDL-----------------------TGGPDQV- 65
D D Q I Y I AGN + F ID S L G P +
Sbjct: 1941 DRDMKQEIYYSIKAGNQHNTFGIDRQSGLVFLNENLDRELVPTYSLIIEASDNGNPFKTN 2000
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
L+V ++V++VND P+ +Y+ ++ EN + +Q+ A+D D + I Y I++G
Sbjct: 2001 TLVVSVEVRDVNDQRPVFQPTMYFKELPENTAHSNSFLQVHATDDDEGVNAEIQYTITSG 2060
Query: 126 NPESYFNIDIGSGSL 140
N + F + +G++
Sbjct: 2061 NDQGLFIVHGRTGAV 2075
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 26 ASDGDLDPDQRISYKISA-----GNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
++ LD + + SY ++A G PE Y + I ++V +VNDN+
Sbjct: 1137 STTASLDREAQASYTLTAYVRDFGYPERYSSATI---------------VVRVTDVNDNL 1181
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ + I EN I Q+ A D D + R+SY I +GN S F ID +G L
Sbjct: 1182 PVFVKDEVSLSIPENTEQ-RAIHQVVAKDLDTGDNARLSYTIISGNVGSAFTIDPETGQL 1240
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------IGSDL 58
I Q+ A D D + R+SY I +GN S F ID I +
Sbjct: 1202 IHQVVAKDLDTGDNARLSYTIISGNVGSAFTIDPETGQLSCKSLDRETVSSYNLTIRASD 1261
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + V+++V + NDN P Y I EN ++Q++ASD D +
Sbjct: 1262 HGSPQRNTMCRVFVKVLDKNDNYPQFSALEYAHTIKENVVVGTFVLQVSASDIDEGENAH 1321
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I+Y + + + F +D SG++
Sbjct: 1322 ITYSL-GNDTDGLFQVDSQSGNI 1343
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 28/150 (18%)
Query: 19 LPIVQLAASDGDLDPDQR----ISYKISAGNPESYFNIDIGSDL---------------- 58
P+ + A+D D + D+ +++ I GN E +F ID S L
Sbjct: 987 FPVTHIIATDADSNVDESGNGVLAFSIVDGNEEGHFAIDRSSGLLSIQTTLDRETTPSFT 1046
Query: 59 -------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
G P + + ++ I V ++ND+ P+ Y I EN ++Q+ A+D
Sbjct: 1047 LTIQVRDQGMPQRSAIKLISIHVLDINDHAPLFSQSSYTVDIQENLPPQSNVLQVQATDL 1106
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D+ + ++SY + G F +D +G L
Sbjct: 1107 DIGVNGKLSYYLPPGVGGDKFVLDSTTGQL 1136
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG-ILPIVQLAASDGDLDPDQR 117
T G Y + +Q+ ++NDN P VYY+ E + G + + Q+ A D D + +
Sbjct: 1579 TSGGLSTYTRLVVQLTDINDNAPKFAQNVYYSSTWEGEEGDQVYVTQVLAVDADSNSNAD 1638
Query: 118 ISYKISAGNPESYFNI 133
I Y I GN F I
Sbjct: 1639 IMYNIIGGNEGFTFQI 1654
>gi|307174406|gb|EFN64925.1| Neural-cadherin [Camponotus floridanus]
Length = 1686
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 36 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 90
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 91 GALDYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFERPNYRTQITEEDDRTLP 150
Query: 102 --IVQLAASDGDLDPDQRISYKISAG--NPE----SYFNIDIGSGSL 140
++ + A+DGD D Q I Y ++ +PE S F+I+ +G +
Sbjct: 151 KRVLGVTATDGDKDRPQNIVYFLTGQGIDPENPANSKFDINRTTGEI 197
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAG--NPE----SYFNID--- 53
P Y QI E LP ++ + A+DGD D Q I Y ++ +PE S F+I+
Sbjct: 135 PNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPENPANSKFDINRTT 194
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 195 GEIFVLKPLDRDQPNGRAQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 254
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP++ + K+
Sbjct: 255 GNVTENGTAGMVVMTMTAVDYD-DPNEGTNAKL 286
>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Megachile rotundata]
Length = 5000
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y Q+ E + ++++ +D D + + Y + GN +F ID + +L
Sbjct: 1204 YKVQVNEGAATGTQLLKVYTTDADEGLNGDVFYSLEEGNERGHFAIDEATGQISLTKELD 1263
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y++ V ++V + NDNVP +D ++E
Sbjct: 1264 RETSDSYVLTVVAHDAGLETRLSSSTTVRVEVLDENDNVPRFVDNESRISVLETTPTNTE 1323
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V+ A+D DL P+ +++ ISAGN F +D +G+L
Sbjct: 1324 LVRFKATDDDLGPNSELAFAISAGNRRDTFYVDPLTGTL 1362
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y IS G+ F I
Sbjct: 2185 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSISMGDDNRDFTISEDGGVIRVAKNLN 2244
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D S++ P V I V ++NDN P+ LD Y A ++EN
Sbjct: 2245 FERKSKYHLTIRGEDCASEVGETPRGDNAQVTITVLDINDNAPVFLDSPYLAHVMEN--- 2301
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 2302 MVPPGGGFVIQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 2348
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID------------ 53
Y A + E + ++ + A D D+ P + + SY I GN F +D
Sbjct: 3426 YDATVSEGAAHGTRVLTVRAVDKDIKPQNNQFSYSIIGGNVGQAFKVDPQTGDIETAKQL 3485
Query: 54 -----------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
IG+ TG P Q +V+I++ + NDN P+ P + EN+
Sbjct: 3486 DRESIPVYDLTIGAIDTGSPPQTGTALVHIELSDTNDNGPIFDPPEVIGYVNENEPAGTI 3545
Query: 102 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DL P+ +YK+ G +D +G L
Sbjct: 3546 VMTLSATDPDLPPNGAPFTYKLVGGRQSDMVTLDKHTGVL 3585
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------------- 53
YA + EN + + +A D D + + +I AGN +F +D
Sbjct: 339 YATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNSQSFDIVYVNGRL 398
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D P + I V +VND+ P+ Y A + E
Sbjct: 399 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSF 458
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y +GN + +F ID +G
Sbjct: 459 VASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTG 495
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + Q+ N +G + L + G LD +Q ++++++ + G P
Sbjct: 144 DGKFRLQVTGNPTGETSYLHLETT-GKLDREQ-----------VEFYSLNVCARDRGRPA 191
Query: 64 QV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+V +L+V + V +VNDN P+ Y + E+ ++ + A+D D + + R++Y +
Sbjct: 192 RVGFLLVNVTVLDVNDNPPIFQQSDYVVALNESAPVGTTVLTVHATDKDSEDNSRLTYYL 251
Query: 123 SAGNPESYFNIDIGSGSL 140
+ E F ID +G++
Sbjct: 252 P--DIERQFTIDPETGTI 267
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ VY V ++NDN P+ + A IVEN + P++ + A D D + R+ Y ++ G+
Sbjct: 1955 VTVYCNVVDLNDNAPIFEVGPHAADIVENTTIGTPVLSVTAQDLDSGDNGRVIYAVAGGD 2014
Query: 127 PESYFNI 133
F +
Sbjct: 2015 ENGDFGV 2021
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y A + E+ + +++++ASD D + + + Y+++ GN E F ID
Sbjct: 1682 IYQASVSESAPNVTQLLRVSASDVDENRNGLVHYRVAEGNEEGQFMIDGSSGQVTLVGKL 1741
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I D P ++ I + + NDN P P ++EN
Sbjct: 1742 DYETTSSYSLKIIAVDAGAEPLSSSCMLSISILDENDNAPSFPKPSVSVDVLENMRIGEL 1801
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + I+Y I+A N F+I +GS+
Sbjct: 1802 VASVTATDADSGQNADITYSITATNNHGTFSISPSTGSI 1840
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VYIQ ++NDN P +Y A + E+ + +++++ASD D + + + Y++
Sbjct: 1660 DQAKVQVYIQ--DINDNQPKFTKDIYQASVSESAPNVTQLLRVSASDVDENRNGLVHYRV 1717
Query: 123 SAGNPESYFNIDIGSGSL 140
+ GN E F ID SG +
Sbjct: 1718 AEGNEEGQFMIDGSSGQV 1735
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + VY V +VNDN P VY + E+ IV + ASD D P+ ++
Sbjct: 2389 GGGQASTVRVYFNVLDVNDNPPAFNTSVYSTSVSESLPAGSSIVTVGASDADDGPNAQLL 2448
Query: 120 YKISAGNPESYF 131
Y+I++G+P+S+F
Sbjct: 2449 YRIASGDPQSHF 2460
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------- 61
I ++A+DGD + + Y + +GN +F+I S L
Sbjct: 964 IKGVSATDGDSGQNANLRYSLVSGNALGWFSISENSGLVTSAGLLDRETTSEIVLNISAK 1023
Query: 62 -----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + I + +VND VP ++ +VE+ ++ L+A+D DL +
Sbjct: 1024 DQGLQPRVSYTKLVINITDVNDQVPTFTQSTFHVSLVEHAPAGTELLVLSATDDDLGSNG 1083
Query: 117 RISYKISAGNPES---YFNIDIGSGSL 140
+ + A P S F +D SG L
Sbjct: 1084 TVHFSFDAETPASAQELFRLDALSGRL 1110
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 37/162 (22%)
Query: 13 ENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDI-------GSDL----T 59
E+ S ++ A+D D+ + +Y+I GN + F +DI G+ L T
Sbjct: 623 EDASSGRQVILDTATDTDIGSNGVDHTTYRIVKGNEQRRFRLDITVNPSGEGAFLHLVST 682
Query: 60 GGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG D+ YL V + +Q++NDN P Y + E+ +
Sbjct: 683 GGLDREVTPFYQLLIEVEDKGEPKKFGYLQVNVTIQDINDNPPSFEQDQYQTSVFEDAAV 742
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+AASDGD + I Y + G P F ID +G++
Sbjct: 743 GSSVLQVAASDGDEGANAEIRYFLDEGTP---FQIDPKTGTV 781
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNID-------IG 55
++ +VE+ ++ L+A+D DL + + + A P S F +D
Sbjct: 1054 TFHVSLVEHAPAGTELLVLSATDDDLGSNGTVHFSFDAETPASAQELFRLDALSGRLSTA 1113
Query: 56 SDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
++L YL+ V + +++VNDN P+ Y+A + EN+
Sbjct: 1114 AELDREERASYLLHVQAADGGSPPLRSAGRVNVTLRDVNDNRPVFYPVQYFANVKENEPS 1173
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ ++A+D DL + + Y I+AG+ F+I+ +G +G
Sbjct: 1174 GSYVTTVSATDPDLGRNGTVKYMITAGDTVK-FHINGNTGKIG 1215
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 50 FNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + TG P V + ++++NDN P YA+++ENQ + L AS
Sbjct: 3944 YNLTVLAVDTGTPPATGSTTVIVNLEDINDNGPTLT--TSYAEVMENQRAGTAVTTLTAS 4001
Query: 109 DGDLDPDQ--RISYKISAGNPESYFNI 133
D DL P+Q + +S+G+ +SYF++
Sbjct: 4002 DADLPPNQGPFLFSLLSSGSAKSYFSL 4028
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +Q+VNDN P+ + + I EN I+QL A+D D P+ ++Y I +G +
Sbjct: 2194 VEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALVTYTIISGADD 2253
Query: 129 SYFNIDIGSGSL 140
S F ID SG L
Sbjct: 2254 S-FRIDPESGDL 2264
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D D R+ ++ +Y + +D P + V + V +VNDN P +Y
Sbjct: 2568 GTIDGDVRLVGELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIY 2627
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+I EN ++Q+ A+D D + +I + I GN S F ID +G
Sbjct: 2628 DIEIEENTLTGTDVIQVFATDADEGTNGQIRFSIPGGNTNSDFRIDSVTG 2677
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I L+A D D + + I+Y I++GN F+I+ S +
Sbjct: 3576 IRTLSARDKDREMNGVITYNITSGNDRGLFSINSRSGVLALAQPLDFEEKQQHNLRVSAT 3635
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG Y+ V + V +VNDN P+ Y+ + EN +V++ A+DGD +
Sbjct: 3636 DGGWISKTSYVSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTVVKMTATDGDSGANA 3695
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y I + + + F ID +G++
Sbjct: 3696 VMAYVIQSSDSD-LFVIDPNTGTI 3718
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 25/162 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDG-DLDPDQRISYKISAGNPESYFNID-------IGS 56
P Y+ + ++ ++Q+ A+D D + + Y I+ GN + F +D + S
Sbjct: 3454 PNYFTPVTKSVKVGTRLIQVVANDKKDFGLNSEVEYLITGGNSSTKFKLDKTSGWITVAS 3513
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L ++++L V I V N + P A + E+ +
Sbjct: 3514 SLVSDVNKIFLADVTATDRGNPPLSARTSVRIAVTEENHHTPEFSQSQVSATVPESIAVG 3573
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I L+A D D + + I+Y I++GN F+I+ SG L
Sbjct: 3574 TAIRTLSARDKDREMNGVITYNITSGNDRGLFSINSRSGVLA 3615
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 25/151 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN ++Q+ A+D D + +I + I GN S F ID
Sbjct: 2626 IYDIEIEENTLTGTDVIQVFATDADEGTNGQIRFSIPGGNTNSDFRIDSVTGVISVAKQL 2685
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+D P V I + +VND P+ Y + EN +
Sbjct: 2686 DREARSSYSLVVQAADRGSSPRTDQATVNIVLLDVNDCSPVFELSPYTIGVQENLENLPT 2745
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYF 131
I+Q+ A D D + ++SY +S GN E F
Sbjct: 2746 NILQVVARDDDQGANGQLSYMLSGGNDEGAF 2776
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN------------------- 45
P ++EN + + A+D D + I+Y I+A N
Sbjct: 1786 PSVSVDVLENMRIGELVASVTATDADSGQNADITYSITATNNHGTFSISPSTGSIFLVKK 1845
Query: 46 ----PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+S + +++ + G P + I V IQV++ NDN P+ + I EN
Sbjct: 1846 LDYETQSVYRLNVSAKDNGRPPRSSSIPVIIQVRDFNDNPPIFTPGDIFKSIPENLPAST 1905
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSG 138
++ + A D D D + ++ Y I P ++F+ID +G
Sbjct: 1906 SVMMITAHDTDADINGQLEYSIVQQVPRGNHFSIDASTG 1944
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y V I +Q+VNDN P+ + A I+EN S ++ ++A D D P+ ++ Y
Sbjct: 3116 PYSSYGKVEITIQDVNDNHPVFDKDPFQADILENLSPQRVLI-VSALDLDSGPNGQLEYA 3174
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ++ F+I+ +G +
Sbjct: 3175 IVDGNKDNSFSINRATGEI 3193
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQ--RISYKISAGNPESYFNIDIGSDLT 59
YA+++ENQ + L ASD DL P+Q + +S+G+ +SYF++ LT
Sbjct: 3982 YAEVMENQRAGTAVTTLTASDADLPPNQGPFLFSLLSSGSAKSYFSLSQNGVLT 4035
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 23 QLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78
++ AS G + Q + Y+ S G N + I SD P V + + + ND
Sbjct: 3387 RMNASTGQIFVKQPLKYQNSTGAGSLNINRHSFIVTASDRAVQPLMSETTVIVNIVDSND 3446
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASD-GDLDPDQRISYKISAGNPESYFNIDIGS 137
N P P Y+ + ++ ++Q+ A+D D + + Y I+ GN + F +D S
Sbjct: 3447 NPPQFDLPNYFTPVTKSVKVGTRLIQVVANDKKDFGLNSEVEYLITGGNSSTKFKLDKTS 3506
Query: 138 G 138
G
Sbjct: 3507 G 3507
>gi|194219797|ref|XP_001917802.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5 [Equus
caballus]
Length = 806
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + V + + +VNDN P+
Sbjct: 402 TDGTLDREQTPEYNVTI----------TATDRGKPPLSASISVTLHITDVNDNAPVFHQA 451
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 452 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 508
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ + + V +VNDN P+ VY+ +VE QSG + +V ++A+D D + +SY I+ G
Sbjct: 2678 FVELQVSVLDVNDNAPLFDQSVYFTSVVEEQSGQVQVVSVSATDEDSLSNGDVSYAITLG 2737
Query: 126 NPESYFNI 133
N + F+I
Sbjct: 2738 NTNNAFDI 2745
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY+ +VE QSG + +V ++A+D D + +SY I+ GN + F+I +T
Sbjct: 2699 VYFTSVVEEQSGQVQVVSVSATDEDSLSNGDVSYAITLGNTNNAFDISSSGVITTTQPLD 2758
Query: 60 ----------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P Q IV + V ++NDN M+ +Y A I E+ +
Sbjct: 2759 RETVASYILTVEATDGGNPSQSGSAIVVVTVTDINDN-RMSFTKMYDATIPEDAPPGTHV 2817
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V L +D D + + I AG S F I+ +G +
Sbjct: 2818 VTLHTTDP--DENNLSQFSIEAGGQSSLFAINPITGEI 2853
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTG 60
D Y + I E+ G + V+ A D D + I+Y IS G + F+ID S L G
Sbjct: 3122 DDTYRSSIAEDVGGYVATVR--AEDDDSGINGEITYSIS-GADAALFSIDAVSGIVSLVG 3178
Query: 61 GPDQ---------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ I+ + V +V+DN P+ L Y A + EN
Sbjct: 3179 SLDRETSDEHQIQVTAEDRAMYSQSATAILIVTVTDVDDNPPVFLPREYRADVFENSPSA 3238
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+V + A+D D + Y IS G+ +F I+ +G
Sbjct: 3239 TPVVTVTATDADTGTNADFEYIISGGDGTDFFTINPETG 3277
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 35 QRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
Q + Y++ + YF + +D P VYI V++VNDN P+ +PV Y++ V
Sbjct: 1933 QSLDYEVK----QHYFMTVMATDKGSSPRSSTATVYINVEDVNDNNPV-YNPVDYSEEVP 1987
Query: 95 NQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
I +V L A+D D + + + I++G+P F +
Sbjct: 1988 EDVAIGTSVVTLTATDLDSGSNGELQFSIASGDPSQRFTV 2027
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGG- 61
P Y++ + N ++Q+ A D D + I+Y IS GN F++ D G LT G
Sbjct: 3017 PSYFSPVTANTRSNTRVLQVLAVDQDTGSNAAITYSISDGNGTEKFDVEADTGWILTKGV 3076
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ V + + NDN P+ D Y + I E+ G
Sbjct: 3077 SLAGDVGITYQLLVKATDNGNIKKEDETTVTFLITDSNDNAPVFDDDTYRSSIAEDVGGY 3136
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ V+ A D D + I+Y IS G + F+ID SG
Sbjct: 3137 VATVR--AEDDDSGINGEITYSIS-GADAALFSIDAVSG 3172
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
Y A + E I++++A+D D+ + I Y I +GN E F+ID +
Sbjct: 1237 YQASVSELAQNETLIIRVSATDDDVGDNSYILYSIVSGNEEKRFHIDHVHGQIVLIAPLD 1296
Query: 56 SDLTGG-------------PDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILP 101
++T G P + ++ V I V + ND+ P ++D ++ E
Sbjct: 1297 REVTEGYVLRVKARDGGIVPQESFVEVEITVLDENDHRPSFSVDLQREIEVTECLQIGDT 1356
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A+D D++ + +ISY I+ GN + F ++ SG +
Sbjct: 1357 IGGVQATDMDINSNGQISYTITGGNLDGVFGVNANSGEV 1395
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 41 ISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ AG P + F+I + +G P Q + V I V ++ND+ P+ Y A + E
Sbjct: 1190 VEAGQPTT-FSIRVRVHDSGQPQLQDHADVNIHVVDINDSPPVFNRESYQASVSELAQNE 1248
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
I++++A+D D+ + I Y I +GN E F+ID
Sbjct: 1249 TLIIRVSATDDDVGDNSYILYSIVSGNEEKRFHID 1283
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 47 ESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E ++ ++I +D + P YLIV + + +VNDN P+ Y+A + E+ + +V L
Sbjct: 244 EDFYILNISATDNSSTPRTGYLIVNVTITDVNDNSPIFTQTTYFATVNESSAAGTSVVHL 303
Query: 106 AASDGDLDPDQRISYKI 122
A+D D + I Y++
Sbjct: 304 NATDIDQGSNGDIVYRL 320
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYF----------------------NID---- 53
P+ L A D D + + R+S I +GN + F NID
Sbjct: 407 PLFNLKAIDEDREENGRVSMSIHSGNDRNDFSGTSISLPTGDVFFLLRVSPSANIDREII 466
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQL 105
D+ P + Y + I V + ND+ PM L Y A ++E+ Q G + +
Sbjct: 467 ASYNLTFAAEDMGTPPRRTYRSIIIYVVDENDHAPMFLQESYRAGLLESIQVGSF-VKSV 525
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D + I Y I+ G+ +F ID G+G
Sbjct: 526 TATDADEGINADIVYSIT-GDEYGWFQIDNGTG 557
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP-- 62
Y A + EN P+V + A+D D + Y IS G+ +F I + G LT G
Sbjct: 3227 YRADVFENSPSATPVVTVTATDADTGTNADFEYIISGGDGTDFFTINPETGLILTQGNLD 3286
Query: 63 -DQVYLIVYIQVQNVNDNVPM--------TL--DPVYYAQIVENQ---------SGILPI 102
+ ++ V N+ M TL + +Y Q ++Q + P+
Sbjct: 3287 YETGKTTYHLTVAATNEQATMVDYAHVIVTLLGENEFYPQFTQHQYDFYVNEHATDGAPV 3346
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D DL D ++Y G+ FN+++ SG +
Sbjct: 3347 GVVLATDDDLGDDGIVNYLFIGGSNLQGFNVNLESGQI 3384
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 1 MTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT 59
M L Y A ++E+ Q G + + A+D D + I Y I+ G+ +F ID G+ L
Sbjct: 502 MFLQESYRAGLLESIQVGSF-VKSVTATDADEGINADIVYSIT-GDEYGWFQIDNGTGLV 559
Query: 60 GGPD--------QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ QV L I+ I +Q+VND P+ + + Y++ VE
Sbjct: 560 TTREKLDHETAAQVTLTITASDQGLEPMANTTILTIDIQDVNDEYPV-FNQIAYSETVEE 618
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
S ++Q+ A+D D + ++Y S+ F++D SG L
Sbjct: 619 NSPARDLIQVLATDLDNGVNGDVTYTFSSDQYSGMFSLDPESGLL 663
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 45 NPESY----FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
NP +Y F +D G+ G V I V N P+ P Y++ + N
Sbjct: 2976 NPNTYTFSVFAVDRGTPALYGEASVI----ITVTQDNSYTPVFATPSYFSPVTANTRSNT 3031
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A D D + I+Y IS GN F+++ +G
Sbjct: 3032 RVLQVLAVDQDTGSNAAITYSISDGNGTEKFDVEADTG 3069
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
+ + Y++ VE S ++Q+ A+D D + ++Y S+ F++D S L
Sbjct: 607 FNQIAYSETVEENSPARDLIQVLATDLDNGVNGDVTYTFSSDQYSGMFSLDPESGLLQIT 666
Query: 60 --------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P Q V I V + NDN P YYA ++EN
Sbjct: 667 VPLDREEQDSYELEILASDGGSPSLQATATVTIAVLDQNDNPPQFYPTEYYASVIENGPA 726
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L + ++A+D D+ + + + +S S F ID SG++
Sbjct: 727 GLFVTVVSATDLDVGVNGAVIFSLS---DSSKFQIDSYSGNV 765
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A + F +D
Sbjct: 588 YDVSVVENAPTGTELLILRATDRDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL P+ + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPRFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F+ID SG +
Sbjct: 1256 RQFSIDSSSGQVA 1268
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL P+ + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 QVGSVSASTMDLNSN--ISYLITTGDQKGMFTINQVTGQL 848
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDNVP+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVKGNEENSFSINHATGEI 2725
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVGGNAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID + L
Sbjct: 2158 LYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITVAKPL 2217
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
YL+ V I + ++ND VP+ Y + EN +
Sbjct: 2218 DREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLETLPR 2277
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + +ISY + GN ++ F + SG L
Sbjct: 2278 TILQVVARDDDQGSNSKISYVLFGGNEDNAFTLS-ASGEL 2316
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F ++
Sbjct: 3096 ATIPESHSIGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L Y A I E+ + + +++++ASD D + I Y I GN E F+ID S L
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFSIDSSSGQVALI 1270
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1271 GKLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGIDGEVHYLIFGNSRKKGFQINKKTGQI 3355
>gi|348544967|ref|XP_003459952.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1540
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + + NDN+P +Y ++ NQ+ L +VQ+ A D D+D + +I+Y I GN
Sbjct: 398 VTVTLLDENDNIPKFTSGMYEGKVFANQTEGLLLVQVRAEDPDVDVNGQIAYSIDFGNSR 457
Query: 129 SYFNIDIGSGSL 140
YF ID +G +
Sbjct: 458 GYFTIDENTGEI 469
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+Y ++ NQ+ L +VQ+ A D D+D + +I+Y I GN YF ID
Sbjct: 416 MYEGKVFANQTEGLLLVQVRAEDPDVDVNGQIAYSIDFGNSRGYFTID 463
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
D P V +QV++VN++ P VY A + P++Q+ ASD D+
Sbjct: 1213 DTRNPPTSAMTTVRVQVEDVNES-PHFPPEVYSASVFSIAPYKTPVIQVKASDPDVGDVG 1271
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++ Y ++A +P YF++D SG L
Sbjct: 1272 QLVYSLTAESP--YFDMDPSSGLL 1293
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG-- 61
+ VY I E+ I ++A+DGD + + Y + +GN +F+I S L
Sbjct: 455 ETVYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLVSGNALGWFSISENSGLVTSAA 514
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P Y + + + +VND VP Y+ +VE+
Sbjct: 515 LLDREIASEIVLNISAKDQGLQPKISYTKLIVNITDVNDQVPTFTQSTYHVSLVEHAPAG 574
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
+V L+ASD DL + I + A P S F +D+ SG L
Sbjct: 575 TELVVLSASDDDLGANGTIRFSFDAETPASVQELFRLDVVSGRL 618
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VYIQ ++NDN P ++ A I E+ + +++++ASD D + + + Y I
Sbjct: 1168 DQAKVQVYIQ--DINDNPPKFTKDIFQASISESAQNMTQLLRVSASDVDENKNGLLRYHI 1225
Query: 123 SAGNPESYFNIDIGSGSL 140
+ GN E F ID SG +
Sbjct: 1226 AEGNEEGQFTIDSSSGQV 1243
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLTGGP 62
Y+ +VE+ +V L+ASD DL + I + A P S F +D+ S
Sbjct: 562 TYHVSLVEHAPAGTELVVLSASDDDLGANGTIRFSFDAETPASVQELFRLDVVSGRLSTA 621
Query: 63 ------DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSG 98
DQ +++IQ + ++NDN P+ Y+A + EN+
Sbjct: 622 VELDREDQASYLLHIQAADAGSPPLHSVGKVNITLWDINDNRPVFYPVQYFANVKENEPS 681
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++A+D DL + + Y I+AG+ S F I+ +G +
Sbjct: 682 GSYVTTVSATDPDLGRNGTVKYFITAGD-SSKFRINSNTGKI 722
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
++ A I E+ + +++++ASD D + + + Y I+ GN E F ID
Sbjct: 1190 IFQASISESAQNMTQLLRVSASDVDENKNGLLRYHIAEGNEEGQFTIDSSSGQVTLVGKL 1249
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I D P ++ I + + NDN P+ ++EN
Sbjct: 1250 DYESTSSYSLKIIAVDAGAVPLSSSCMLSISILDENDNSPIFPKSSLSVDVLENMRIGEL 1309
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +D D + I+Y I+A N F+I +GS+
Sbjct: 1310 VASVTGTDADSGQNADITYSITATNNHGTFSISPNTGSI 1348
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D D R+ ++ +Y + +D P + V + V +VNDN P +Y
Sbjct: 2076 GTIDGDVRLIGELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIY 2135
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+I EN ++Q+ ASD D + +I + IS GN S F ID +G
Sbjct: 2136 DIEIEENILTGTDVIQVFASDADEGTNGQIRFSISGGNTNSDFRIDSVTG 2185
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +Q+VNDN P+ + + I EN I+QL A+D D P+ ++Y I +G +
Sbjct: 1702 VEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALVTYTIISGADD 1761
Query: 129 SYFNIDIGSGSL 140
S F ID SG L
Sbjct: 1762 S-FRIDPESGDL 1772
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN ++Q+ ASD D + +I + IS GN S F ID
Sbjct: 2134 IYDIEIEENILTGTDVIQVFASDADEGTNGQIRFSISGGNTNSDFRIDSVTGVISVAKQL 2193
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + +VND P+ Y + EN LP
Sbjct: 2194 DREARSSYSLVVQAADRGSSPRVDRATVNIVLLDVNDCSPVFELSPYTVNVQENLEN-LP 2252
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + ++SY +S GN E F + SG L
Sbjct: 2253 KNILQVIARDDDQGANGQLSYMLSGGNDEGAFTLS-SSGQL 2292
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + VY V +VNDN P+ Y + E+ I+ + A+D D + ++
Sbjct: 1897 GGGQASTVRVYFNVLDVNDNAPIFNTTTYSTSVSESLPPGSSIITVGATDADDGQNAQLL 1956
Query: 120 YKISAGNPESYFNI 133
YKI++G+P+ +F I
Sbjct: 1957 YKIASGDPQGHFVI 1970
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRI 118
P Y + I V +VNDN P+ ++A+I+EN LP ++ ++A D D P+ ++
Sbjct: 2624 PYSSYEKLEITVLDVNDNHPVFDKDPFHAEILEN----LPPKGVLMVSAVDLDSGPNGQL 2679
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y I GN E+ F+I+ +G +
Sbjct: 2680 EYAIIEGNKENSFSINRATGEI 2701
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 13 ENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDI-------GSDL----T 59
E+ S ++ A+D D+ + +Y+I GN + F +DI G+ L T
Sbjct: 131 EDASSGRQVILDTATDSDIGSNGVDHTTYRIVKGNEQRKFRLDITVNPSGEGAFLHLVST 190
Query: 60 GGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG D+ Y+ V + +Q++NDN P+ Y + E+ +
Sbjct: 191 GGLDREVTPFYQLLIEVEDKGEPKKFGYMQVNVTIQDINDNPPIFEQDQYQTSVFEDAAV 250
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ ASD D + I Y + G P F ID +G++
Sbjct: 251 GSSILEITASDQDEGANAEIRYFLDEGTP---FQIDPKAGTI 289
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----- 60
VY + EN I ++A+ DL+ + ISY I++G+ F+++ +T
Sbjct: 774 VYSFVMFENVGVGTVIGTVSATTVDLNTN--ISYLITSGDQRGLFDVNSAGQITALSQID 831
Query: 61 ----GPDQVYLI-----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G Q+ ++ V I V+++NDN P + V + VEN S I Q
Sbjct: 832 REEQGFYQLKVVARAGEITGEAFVNITVKDLNDNAPHFIHTVEHVSAVENWSTGHVIFQA 891
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + + Y + NP+ F+I G
Sbjct: 892 KASDPDEGANGMVVYSLKQ-NPKGLFHIHEKHG 923
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 23 QLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78
++ AS G++ Q++ Y+ S G N + I SD P V + + + ND
Sbjct: 2895 RINASTGEIFVKQQLKYQNSTGASSININRHSFIVTASDRALKPLMSETTVIVNIVDSND 2954
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASD-GDLDPDQRISYKISAGNPESYFNIDIGS 137
N P P Y+ + ++ ++++ A D D + + Y ++ GN + F +D S
Sbjct: 2955 NPPEFNSPSYFTPVTKSVKVGTRLLRVVAQDKKDFGLNSEVEYLMTGGNSSNKFKLDKTS 3014
Query: 138 G 138
G
Sbjct: 3015 G 3015
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 4 DPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
DP ++A+I+EN LP ++ ++A D D P+ ++ Y I GN E+ F+I+
Sbjct: 2648 DP-FHAEILEN----LPPKGVLMVSAVDLDSGPNGQLEYAIIEGNKENSFSINRATGEIR 2702
Query: 54 -----------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+D P + V I V +VNDN P ++ A + EN
Sbjct: 2703 TTRPLDREKVALYTLKVKATDRGLPPKNTIVKVLINVLDVNDNAPR-FSKIFSATVAENA 2761
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ +D D + Y I+ + FNI+ +G +
Sbjct: 2762 PVGYTVTRVTTTDEDAGSNAISRYSIT--DTSLPFNINPNTGDI 2803
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQ--RISYKISAGNPESYFNIDIGSDLT 59
YA+++ENQ + L ASD DL P+Q + +S+G+ +SYF++ LT
Sbjct: 3490 YAEVMENQRAGTAVTTLTASDPDLPPNQGPFLYSLLSSGSAKSYFSLSPAGVLT 3543
>gi|345799035|ref|XP_003434519.1| PREDICTED: cadherin-23 isoform 1 [Canis lupus familiaris]
Length = 3354
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1114 DIPEGHSIVQLKAADADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 598 YSIVNASAFGSYFDISVYEG 617
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+AGN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDHDIGINSILSYYITAGNEDMTFRMDRISGEIVTRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQSFYHLGVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQKPYYEILLDEGPDTINA 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID +G
Sbjct: 1653 SLITIQALDLDEGPNGTVNYAIVAGNIINTFYIDRHTG 1690
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESLFGYNVSVNENVGGGTAVVQVRATDHDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+AGN + F +D SG +
Sbjct: 1558 GINSILSYYITAGNEDMTFRMDRISGEI 1585
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ + + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTVCARDRGVPPLSSTMMVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVTHIL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFSINATTG 1906
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPDQV 65
A+++E + + Q+ A D D + +SY++ G P F I+ S + T D+
Sbjct: 897 AEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTSELDRE 956
Query: 66 YLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ Y I+V +VND P VY + E+ +V
Sbjct: 957 RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVW 1016
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L +D D+ + +SY I+ GN + F++
Sbjct: 1017 LNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D + +++ I+AGN E F+I+ + D P+
Sbjct: 1870 VTHILASDADSGCNALLTFNITAGNRERAFSINATTGVITVNRPLDRERIPEYKLTISVK 1929
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASD 109
+ + ++ I + + NDN P+ + Y A+++EN P+ L A D
Sbjct: 1930 DNPENPRIARRDFDLLLIFLADENDNHPLFTESTYQAEVMENSPAGTPLTVLNGPILALD 1989
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
DLD ++YK+ G+ F+I+ +G
Sbjct: 1990 ADLDVYAVVTYKL-LGSQSGLFDINNSTG 2017
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D + ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDAGSNGELAYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
>gi|332023167|gb|EGI63423.1| Cadherin-related tumor suppressor [Acromyrmex echinatior]
Length = 1862
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V + NDNVP +D ++E S +++ A+D DL P+ +++ ISAGN
Sbjct: 1316 VHIEVLDENDNVPFFVDNKSRISVLETMSINTELLRFKATDNDLGPNSELTFAISAGNKR 1375
Query: 129 SYFNIDIGSGSL 140
F ID +G L
Sbjct: 1376 DTFYIDPLTGIL 1387
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------- 54
+A + EN + + +A D D + S +I AGN +F +++
Sbjct: 417 FATVDENTAKDSIVAAVAVIDDDEGLNGETSVEIRAGNELGHFRLEVTESFDIVRVDGRL 476
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P + I V +VND+ P+ Y A + E
Sbjct: 477 DREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSEFAPIGSF 536
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y+ +GN +++F ID +G
Sbjct: 537 VASISATDADSGLNARIYYEFGSGNEQNWFAIDSDTG 573
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + +++VND+ P+ Y + E+ L A D DL + RI Y+I+ GN E
Sbjct: 997 VRVTIEDVNDHTPVFRLSSYETSLSESTPVNERFFSLTAQDADLGNNGRILYRITDGNAE 1056
Query: 129 SYFNI 133
F I
Sbjct: 1057 GRFGI 1061
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ ++A+D D + RI Y+ +GN +++F ID + L
Sbjct: 537 VASISATDADSGLNARIYYEFGSGNEQNWFAIDSDTGLITTVATLDREVQGSIELHVSAR 596
Query: 60 -GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GGP+ Y ++++ + ND VP + V + EN + I L A D D +
Sbjct: 597 DGGPNTKYASTHLKITILDENDEVPRFPEDVIEIALSENTAPYSLIATLTAVDNDQGTNG 656
Query: 117 RISYKISAGNPESY---FNIDIGSGSL 140
++Y + Y F +D +G L
Sbjct: 657 SVAYSFHSSVLRDYSKTFALDALTGQL 683
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 23/125 (18%)
Query: 36 RISYKISAGNPESYFNIDIGSDL---TGGPDQVYL------------------IVYIQVQ 74
+++Y I G+P+ F ID + + TG D+ + IV I VQ
Sbjct: 838 KVNYAIVFGDPKGNFRIDENTGVIRTTGCLDRERVAYYSLQLSARTNLAYGQTIVNITVQ 897
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLA-ASDGDLDPDQRISYKISAGNPESYFNI 133
+VNDN P + ++++ + + V LA A D D+ + RI Y ++ NP+ F +
Sbjct: 898 DVNDNPPRFPRGEWGDEVLQENAAVGQEVCLARARDRDIGTNSRIVYSLTH-NPDGQFRV 956
Query: 134 DIGSG 138
SG
Sbjct: 957 AENSG 961
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2158 LYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I+Q+ A D D + ++SY + GN +S F + SG LG
Sbjct: 2277 RTILQVVARDDDQGSNSKLSYVLFGGNEDSAFTLS-ASGELG 2317
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQVVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINHVTGQL 848
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2690 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2748
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2749 IVNGNMENSFSINHATGEI 2767
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3138 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3197
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3198 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3257
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y I + + + F ID +G
Sbjct: 3258 LNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTG 3290
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3241 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTGVITTQGFLD 3299
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3300 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3359
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3360 GEVFASDRDLGTDGEVRYLIFGNSRKKGFQINKKTGQI 3397
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y + +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSVVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|241148644|ref|XP_002405852.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493767|gb|EEC03408.1| protocadherin fat, putative [Ixodes scapularis]
Length = 1590
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y A + E+ +++++A+D D P+ + Y I+ GN E F ID
Sbjct: 1073 PNYRASVSESAPLRSAVLRVSATDADQGPNGDVLYAIADGNQEESFAIDEATGQVILMAP 1132
Query: 54 -------------IGSDLTGGPDQ--VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
I D TG Q V +QV + NDN P + A ++E +
Sbjct: 1133 LDRERTGSYTLTVIARD-TGARVQHTSTATVLVQVLDENDNAPEFVPGPLRADVLETTAV 1191
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +A D DL + +++ I+AGN + F +D +G+L
Sbjct: 1192 GFELHRFSAMDRDLGMNGEVAFAIAAGNVKEAFKVDSVTGAL 1233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 28/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS------AGNPES-------YFNI 52
+ + EN+ + +L+A DGD + +++ ++ A +P + YF+
Sbjct: 965 TFAFSLAENEPPDTHVGKLSADDGDRGRNAELTFSLASNENDFAVDPRTGFVRTLRYFDR 1024
Query: 53 DIGSDLTGGP----DQVYL-----------IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ +LTG D V L V +++ +VNDN P+ P Y A + E+
Sbjct: 1025 EKLLELTGHDTITMDAVVLDSGIARLRGEAKVLVRITDVNDNAPVFSRPNYRASVSESAP 1084
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A+D D P+ + Y I+ GN E F ID +G +
Sbjct: 1085 LRSAVLRVSATDADQGPNGDVLYAIADGNQEESFAIDEATGQV 1127
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I+V++VND+ P P Y ++E + L ASD D + R+SY+IS GN E
Sbjct: 843 LLIRVEDVNDHTPTFERPSYETSLLELTAVNERFFMLRASDADSGENGRVSYEISEGNQE 902
Query: 129 SYFNI 133
F +
Sbjct: 903 GRFGV 907
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------- 53
A ++E + + + +A D DL + +++ I+AGN + F +D
Sbjct: 1183 ADVLETTAVGFELHRFSAMDRDLGMNGEVAFAIAAGNVKEAFKVDSVTGALFLDRPLDFE 1242
Query: 54 --------IGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
I + G P Q + + ++V +VNDN P + QI E P+V
Sbjct: 1243 QQSSYTLNITASDGGSPRQSSALSFSVRVLDVNDNPPQFANVAIVRQIEEGLPVDTPVVT 1302
Query: 105 LAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSG 138
+ A D D + R++Y+I+ P+ ++F + +G
Sbjct: 1303 VTAVDRDSAANGRVTYQITGQEPQGAHFTVRPDTG 1337
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + + N SG P + L + G LD + R +Y ++ SD P
Sbjct: 205 DARFRLVVTTNPSGETPFLHLETT-GRLDREARDAYTLNVS----------ASDGGTPPR 253
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
YL V + V +VNDN PM Y+ I E+ I+Q+ A+D D + +++Y +
Sbjct: 254 LGYLQVNVSVLDVNDNPPMFDHSDYFVSINESLPVGASILQVRATDADAGVNSQVAYYLD 313
Query: 124 AGNPESYFNIDIGSGSL 140
A + F +D SG L
Sbjct: 314 A---QGDFTVDADSGIL 327
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y ++E + L ASD D + R+SY+IS GN E F +
Sbjct: 860 PSYETSLLELTAVNERFFMLRASDADSGENGRVSYEISEGNQEGRFGVFPDGAVYVKKAL 919
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P + + + V + NDN P+ + + + EN+
Sbjct: 920 DREWRDLYALTVVARDSGDRPRSSAVSLLVHVLDENDNPPVFDNATFAFSLAENEPPDTH 979
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +L+A DGD + +++ +++ E+ F +D +G
Sbjct: 980 VGKLSADDGDRGRNAELTFSLASN--ENDFAVDPRTG 1014
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASKNAVI--RIIGGN--SQFTINPSTGQI 2417
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A + F +D
Sbjct: 588 YDVSVVENAPTGTELLILRATDRDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL P+ + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPRFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F+ID SG +
Sbjct: 1256 RQFSIDSSSGQVA 1268
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL P+ + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 QVGSVSASTMDLNSN--ISYLITTGDQKGMFTINQVTGQL 848
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDNVP+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2709 IVKGNEENSFSINHATGEI 2727
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVGGNAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID + L
Sbjct: 2158 LYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITVAKPL 2217
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
YL+ V I + ++ND VP+ Y + EN +
Sbjct: 2218 DREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLETLPR 2277
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + +ISY + GN ++ F + SG L
Sbjct: 2278 TILQVVARDDDQGSNSKISYVLFGGNEDNAFTLS-ASGEL 2316
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F ++
Sbjct: 3098 ATIPESHSIGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYE 3157
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3158 LCQKHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIH 3217
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3218 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3250
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L Y A I E+ + + +++++ASD D + I Y I GN E F+ID S L
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFSIDSSSGQVALI 1270
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1271 GKLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3201 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3320 GEVFASDRDLGIDGEVHYLIFGNSRKKGFQINKKTGQI 3357
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT-------GGPDQVYLIV---- 69
I+Q+ A D D + +ISY + GN ++ F + +L +Q L V
Sbjct: 2279 ILQVVARDDDQGSNSKISYVLFGGNEDNAFTLSASGELRVIQSLDRESKEQFVLTVTATD 2338
Query: 70 ------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
++ V +VNDNVP +Y+ I E+ ++ + ASD D +
Sbjct: 2339 SGSPALTGTGTIHVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADASANAV 2398
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
ISY+I GN S F I+ +G +
Sbjct: 2399 ISYRIIGGN--SQFTINPSTGQI 2419
>gi|351707763|gb|EHB10682.1| Protocadherin Fat 2 [Heterocephalus glaber]
Length = 4349
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ E+ ++Q+ A D D D + Y + AG + F+ID
Sbjct: 1033 VYQGQVQEDSPPGTQVMQVTAHDDDSGLDGELQYFLRAGTSLAAFSIDPDTGMIQTQAAL 1092
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI++ +VNDN P PV+Y I E+
Sbjct: 1093 DRESIPYYWLTVLAVDRGSVPLSSVTEVYIEIMDVNDNPPRMSRPVFYPCIREDAPLGTS 1152
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN F I +G L
Sbjct: 1153 VLQLDAWDPDSSSRGKLTFNITSGNHMGMFVIHPVTGLL 1191
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AG 125
V+IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY++S
Sbjct: 2783 VHIQVKDVNDNRPIFEADPYKAFLTENMPGGTTVIQVTANDEDTGNDGQVSYRLSMEQGS 2842
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2843 NVHELFAIDSETG 2855
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 22/140 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F+I+ S +
Sbjct: 2379 PQYEASVSELATCGHLVLKVQALDPDSREATRLEYLILSGNQDRHFSINRSSGVISMFNL 2438
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D ++ VYI N N P +Y A++ EN +
Sbjct: 2439 CKKQLDSSSYSLRVGASDGIFRATVPVYINTTNANKYSPAFQQHIYEAELAENAKEGTKV 2498
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 2499 IELLAIDKDSGPYGTVEYTI 2518
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSD-------- 57
Y +VEN + L D D+ R ++ I+ G+P F I D
Sbjct: 2911 YTGSVVENSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGIHQAGDEWRISSRK 2970
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V I V +VNDN P +Y +++ E+ S I
Sbjct: 2971 TLDREHTAKYLLRITASDGKFQTSVPVEISVLDVNDNSPQCTQLLYISRVREDVSPGAFI 3030
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I Y + G F +D +G L
Sbjct: 3031 LKVSATDSDADTNAQIMYSLH-GPGAHEFKLDPHTGEL 3067
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V + V++VNDN P VY + E P++QL ASD D ++ +SY+I +
Sbjct: 2255 VEVLVEDVNDNPPTFSQLVYTTSVSEGLPAHTPVIQLLASDQDSGQNRDVSYQIVEDGSD 2314
Query: 127 PESYFNIDIGSGSL 140
++F I+ +G +
Sbjct: 2315 VSTFFQINGSTGEI 2328
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ---SGIL-----PIVQLA 106
GS++ G + ++VYI + NDN PM L+ + QI E S I+ P V +
Sbjct: 1729 GSNMAGAFTDIIVLVYII--DENDNAPMFLNSTFVGQISEAAPLYSMIMDEDHNPFV-IR 1785
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D + + + YKI +F ID G+L
Sbjct: 1786 ASDKDKEANSLLVYKILDPEASKFFKIDPSMGTL 1819
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV-- 80
Q+ + G L ++ + ++ AG S + D G L P + V + V +VN+N+
Sbjct: 970 QVDSGTGALSLEKELDFERRAGYNLSLWVSDSGRPL---PRRTLCRVEVIVLDVNENLHP 1026
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P VY Q+ E+ ++Q+ A D D D + Y + AG + F+ID +G
Sbjct: 1027 PRFASFVYQGQVQEDSPPGTQVMQVTAHDDDSGLDGELQYFLRAGTSLAAFSIDPDTG 1084
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y A++ EN +++L A D D P + Y I F+I+ +T
Sbjct: 2483 IYEAELAENAKEGTKVIELLAIDKDSGPYGTVEYTIINKLAGEKFSINPSGQITTLQKLD 2542
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V I + + NDN P Y I N S P+
Sbjct: 2543 RENSTERVIAIKVMARDGGGKVAFCTVKIILTDENDNAPQFKASRYTLSIPSNVSKDFPV 2602
Query: 103 VQLAASDGDLDPDQRISYKI 122
+Q+ A D D + ++Y +
Sbjct: 2603 IQVLAYDADEGQNADVTYSV 2622
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ +++EN +++L ASD D P+ I+Y I + + + F ID G+ T G
Sbjct: 3223 YFPKVLENAPSGTTVIRLNASDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTITTQGFLD 3281
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3282 YETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIV 3341
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F ID SG +
Sbjct: 3342 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQIDGRSGQI 3379
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 37/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAGNPESYFNID- 53
Y + EN ++ L+A DGDL + I + + S+ P F +D
Sbjct: 616 YQVSLAENSPSGTELLVLSAVDGDLGDNGTIRFSLQEAEPGVVAVGPSSVTPRQVFRLDP 675
Query: 54 -----------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+ +DL P V + + +VNDN P+ Y+A
Sbjct: 676 VSGKLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQYFA 735
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I EN+ + ++A+D D+ P+ + Y ISAG+ S F + +G
Sbjct: 736 HIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGD-TSRFQVHSKTG 782
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + +Y++ ++NDN P L +Y A + E + + +++++ASD D + I Y +
Sbjct: 1231 DQATVQIYMK--DINDNAPKFLKDLYQATVSELAANLTQVLRVSASDVDEGTNGLIHYSV 1288
Query: 123 SAGNPESYFNIDIGSGSL 140
GN E F ID +G +
Sbjct: 1289 IKGNEEKQFAIDSSTGQV 1306
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------DLT 59
I E+ S I ++A D D + I Y IS+GN F I+ + +L
Sbjct: 3122 IPESHSVGAVIRTVSARDRDAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELC 3181
Query: 60 GGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D + + V I V +VNDN P Y+ +++EN +++L
Sbjct: 3182 QKHDLIVTATDGGWVSRTGFCSVTINVIDVNDNSPAFSPEDYFPKVLENAPSGTTVIRLN 3241
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P+ I+Y I + + + F ID +G++
Sbjct: 3242 ASDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTI 3274
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + + V +VNDN P + A+IVEN S ++ +AA D D + ++ Y+
Sbjct: 2672 PFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSP-RKLLTVAAVDRDSGLNGQLIYE 2730
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ FNI+ +G +
Sbjct: 2731 IIEGNTENSFNINRATGEI 2749
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFN----IDIGSDLTGGPDQVYLIVYIQVQNV 76
++ A+ G++ Q + Y+ S+G+ N I SD P V I + +
Sbjct: 2941 FFRINATTGEIFNKQYLRYQNSSGSSNVNINRHSFIVTSSDRGSPPLLSETTVTINIVDS 3000
Query: 77 NDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 135
NDN P+ L P Y+ + +N ++G I A D D + + Y +S + + F +D
Sbjct: 3001 NDNAPLFLAPKYFTPVTKNVRTGTNLIKVTAVDDKDFGLNSEVEYFLSDESKTNKFRLDR 3060
Query: 136 GSG 138
+G
Sbjct: 3061 STG 3063
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------NIDIG 55
PVY I E+ + + + A+D D + I+Y +S + E F N+
Sbjct: 1883 PVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRA 1942
Query: 56 SD--------LT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D LT GG + VY + ++NDN P+ Y ++EN + I
Sbjct: 1943 LDYEAQQYYILTIRAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSLMENLAPGSAI 2002
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ + +D D + ++S+ I++G+ +F ID
Sbjct: 2003 LNFSVTDADDGSNSQLSFSIASGDSVGHFGID 2034
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L +Y A + E + + +++++ASD D + I Y + GN E F ID + L
Sbjct: 1250 LKDLYQATVSELAANLTQVLRVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLV 1309
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I V + NDN P + ++EN
Sbjct: 1310 GKLDHEATASYSLVIQAVDSGAVPLSSTCTLSIDVLDENDNSPSFPKSILSVDVLENMRV 1369
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1370 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1411
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 38 SYKISAGNPESYFNIDI-----------------GSDLTGGPD---------------QV 65
SY+I +GN E F ++I G D P +
Sbjct: 163 SYRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVEDKGEPRRRG 222
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
YL V + VQ++NDN P+ +Y A++ E+ ++Q+AA+D D + I Y++
Sbjct: 223 YLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVLQVAAADADEGTNADIRYRL 279
>gi|449679036|ref|XP_002161856.2| PREDICTED: protocadherin Fat 4-like [Hydra magnipapillata]
Length = 2695
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--------FNIDIGSDLTGGPD-QVYLIVYI 71
IV + A+D DL+ + I YKI + + ++ + I++ + G P + + + I
Sbjct: 1251 IVTVIATDKDLNLNAEIEYKIVSAHNNTFEVDSKLETYIIEVAAVDKGIPSLRTSVFITI 1310
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
V ++NDN P + VY + EN ++QL A D D + + ++Y ISA + +S+F
Sbjct: 1311 NVADINDNYPKFENDVYNISVKENLGAGHFLIQLRAFDIDKNENGTVAYSISA-DCKSFF 1369
Query: 132 NIDIGSGSL 140
+I+ +G L
Sbjct: 1370 SINESTGLL 1378
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 49 YFNIDIGSDLTGG-PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++N+ I + G P + ++ V I V +VNDN P+ + +A+I EN GI +V+L A
Sbjct: 1878 FYNLTIFARDNGDIPLENFITVNITVLDVNDNYPIFNEDELHAEIKENSKGINELVKLQA 1937
Query: 108 SDGDLDPDQRISYKI 122
+D D+ + +I Y +
Sbjct: 1938 TDQDIGSNAQILYSL 1952
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYK-----------------ISAGNPE--S 48
+A+I EN GI +V+L A+D D+ + +I Y + A + E S
Sbjct: 1919 HAEIKENSKGINELVKLQATDQDIGSNAQILYSLQHDLFSVNSTTGQVIVLRALDREEIS 1978
Query: 49 YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+NI + + G P ++ + V +++DN P+ Y I+EN I+Q+ A
Sbjct: 1979 QYNITVVARDNGNPSLHTEALLIVDVLDMDDNCPVFTSSFYKETILENLPYGTSILQVTA 2038
Query: 108 SDGDL 112
+D D+
Sbjct: 2039 TDKDI 2043
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPE-----------------------SYFNIDIGS 56
PI+Q A+D D ++YKI GN E ++NI + +
Sbjct: 1150 PIMQFKATDAD---GSNLTYKIIGGNDEDTFQINQVTGLLSLKKSLDRERKDFYNISVEA 1206
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG--ILPIVQLAASDGDLDP 114
+ VYL V V +VNDN P+ + Y+ VE +S IV + A+D DL+
Sbjct: 1207 SNEKKTEVVYLPV--GVLDVNDNYPI-FNHESYSGNVEEESDDFTRAIVTVIATDKDLNL 1263
Query: 115 DQRISYKISAGNPESY 130
+ I YKI + + ++
Sbjct: 1264 NAEIEYKIVSAHNNTF 1279
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--GGPDQVYLIVY 70
EN + +L A D D + ++ + I++GN + F I+ +L PD+ + Y
Sbjct: 570 ENVKTRTVVAKLGAEDFDEGLNAQVRFLITSGNTDDMFTINNQGELVTQKQPDREKIDFY 629
Query: 71 ---IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
I V ++ D P + Y + + + PI+ A+D DL ++ I+Y I GN
Sbjct: 630 SLNITVHDLGD--PSLSNTAVYTIQINDLNDNSPII---ATDMDLGINKEITYGILGGNQ 684
Query: 128 ESYFNIDIGSGSL 140
E+ F +D GSL
Sbjct: 685 ENVFFLDPNIGSL 697
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V + + ++NDNVP+ + +Y I E S ++++ ASD D+ + + Y+I +
Sbjct: 1011 FVNVAVTITDINDNVPLIEEKMYQRNIKETVSNGTFVLKITASDLDIGKNGQFVYEIKSS 1070
Query: 126 NPESYFNIDIGSG 138
+F I+ +G
Sbjct: 1071 PNSDHFFINSNTG 1083
>gi|355782853|gb|EHH64774.1| hypothetical protein EGM_18085 [Macaca fascicularis]
Length = 3359
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 1004 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1063
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1064 DRETTAAYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1118
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1164
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 543 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 602
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 603 YSIVSASAFGSYFDISLYEG 622
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1503 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1562
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1563 GINSVLSYYITEGNKDMTFRMDRVSGEIA 1591
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1538 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMTFRMDRVSGEIATRPAPP 1597
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN PM P Y + E +
Sbjct: 1598 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1657
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ + Y I AGN + F ID G
Sbjct: 1658 SLITIQALDLDEGPNGTVIYAIVAGNIINTFRIDRHMG 1695
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1758 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1816
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1817 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1876
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1877 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1911
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 571 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 630
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 631 PLDYEQISNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 690
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 691 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEI 733
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + I Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 900 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGMVVTTTELD 959
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I V +VND +P VY + E+ +
Sbjct: 960 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1019
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1020 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1050
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2500 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2559
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2560 A-FHVDMDSG 2568
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NID--- 53
++EN ++Q+ A+D D + + Y+I AG + +F ID
Sbjct: 2082 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFFIHPVTGVIRVGNATIDREE 2141
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ +D P I+ I ++++ND+ P L+P+ ++E+ I +
Sbjct: 2142 QESYRLTVVATDWGTVPLSGTAIITILIEDINDSCPEFLNPIQTVSVLESAEPGTVIANV 2201
Query: 106 AASDGDLDPDQRISYKI 122
A D DL+P ++ Y I
Sbjct: 2202 TAIDRDLNP--KLEYHI 2216
>gi|297301192|ref|XP_002805748.1| PREDICTED: cadherin-23-like [Macaca mulatta]
Length = 3485
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 1130 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1189
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1190 DRETTAAYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1244
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1245 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1290
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1629 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1688
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1689 GINSVLSYYITEGNKDMTFRMDRVSGEIA 1717
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1884 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1942
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1943 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 2002
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 2003 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 2037
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D + ++ P
Sbjct: 1664 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMTFRMDRVSGEIATRPAPP 1723
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E +
Sbjct: 1724 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1783
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ + Y I AGN + F ID G
Sbjct: 1784 SLITIQALDLDEGPNGTVIYAIVAGNIINTFRIDRHMG 1821
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2626 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2685
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2686 A-FHVDMDSG 2694
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 1026 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 1085
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND +P VY + E+ +
Sbjct: 1086 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1145
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1146 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1176
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NID--- 53
++EN ++Q+ A+D D + + Y+I AG + +F ID
Sbjct: 2208 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFFIHPVTGVIRVGNATIDREE 2267
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ +D P I+ I ++++ND+ P L+P+ ++E+ I +
Sbjct: 2268 QESYRLTVVATDRGTVPLSGTAIITILIEDINDSCPEFLNPIQTVSVLESAEPGTVIANV 2327
Query: 106 AASDGDLDPDQRISYKI 122
A D DL+P ++ Y I
Sbjct: 2328 TAIDRDLNP--KLEYHI 2342
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2146 DINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRID 2205
Query: 135 IGSGSL 140
+G++
Sbjct: 2206 SVTGAI 2211
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ F+I+
Sbjct: 2672 DP-FISEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN S
Sbjct: 2730 PLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSSLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDV 2801
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L + +VEN I Q A D D + + Y +
Sbjct: 874 TGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFTINEKNGTI 949
>gi|321478108|gb|EFX89066.1| hypothetical protein DAPPUDRAFT_304677 [Daphnia pulex]
Length = 1533
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y+A+I EN + +L A D D + +++Y I +GN F+I+ + L
Sbjct: 521 YFAEIAENADIGAKVSELTALDNDTE--SQLTYDIVSGNAGLVFSIEAQTGLLKVHQPLD 578
Query: 61 ---------------GPDQVYLIVYIQVQNVNDNVP--MTLDPVYYAQIVENQSGILPIV 103
G + V +++ NVNDN P M +P IVEN + PIV
Sbjct: 579 YETTKSYDLIVEVDDGKQKATTKVNVKIINVNDNKPQFMNSNPEQIHGIVENTVPLGPIV 638
Query: 104 QLAASDGDLDPD-----QRISYKISAGNPESY 130
++ A+D D DP +I+Y +S + +S+
Sbjct: 639 RVNATDPDYDPSTADGPMKITYTLSGSHADSF 670
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 31 LDPDQRISYKISA---GNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LD ++R SY ++ ES +D G P+Q I+V +VNDN P
Sbjct: 467 LDREERKSYPLTVVAFDGKESALTLD------GLPNQSAKRFQIEVADVNDNAPFFPQSE 520
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Y+A+I EN + +L A D D + +++Y I +GN F+I+ +G L
Sbjct: 521 YFAEIAENADIGAKVSELTALDNDT--ESQLTYDIVSGNAGLVFSIEAQTGLL 571
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQVVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 29/163 (17%)
Query: 3 LDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-- 58
+P Y+ V G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2259 FEPSPYSVSVPENLGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGV 2318
Query: 59 --------------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2319 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASNAYFTTIPEDAP 2378
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2379 TGTDVLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 29/155 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGS---DLTGG 61
+Y QI E + ++A D D P R SY I +GN F+I+ + +T
Sbjct: 3408 IYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGTFSINPQTGQITVTAE 3467
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ L +Y + ++++NDN PM V +++EN+
Sbjct: 3468 LDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKQPGT 3525
Query: 101 PIVQLAASDGDLDPDQ--RISYKISAGNPESYFNI 133
++ L ++D DL P+Q Y +S G SYF++
Sbjct: 3526 LVMTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSL 3560
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2211 YSVNVPENL-GTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2269
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2270 DRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2329
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY+I GN S F I+ +G +
Sbjct: 2330 VLLVNASDADASKNAVISYRIIGGN--SQFTINPSTGQI 2366
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2087 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2146
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2147 QEFRIDSVTGAI 2158
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2597 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2655
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2656 IVNGNMENSFSINHATGEI 2674
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3045 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3104
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3105 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3164
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3165 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3197
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3148 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3206
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3207 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3266
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3267 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3304
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 30/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
Y+ I E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 2315 AYFTTIPEDAPTGTDVLLVNASDADASKNAVISYRIIGGNSQFTINPSTGQIITSALLDR 2374
Query: 62 --PDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
D L+ V + V +VNDN P Y I S LP
Sbjct: 2375 ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHI---PSPTLPG 2431
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +D D+ P+ + Y +S N E F+ID G++
Sbjct: 2432 SFVFAVTVTDADIGPNSELHYSLSGRNSEK-FHIDPLRGAI 2471
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY+I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVISYRIIGGN--SQFTINPSTGQI 2419
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2709 IVNGNMENSFSINHATGEI 2727
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3098 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3157
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3158 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3217
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3218 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3250
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2146 DINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRID 2205
Query: 135 IGSGSL 140
+G++
Sbjct: 2206 SVTGAI 2211
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3201 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3320 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3357
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 30/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
Y+ I E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 2368 AYFTTIPEDAPTGTDVLLVNASDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDR 2427
Query: 62 --PDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
D L+ V + V +VNDN P Y I S LP
Sbjct: 2428 ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHI---PSPTLPG 2484
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +D D+ P+ + Y +S N E F+ID G++
Sbjct: 2485 SFVFAVTVTDADIGPNSELHYSLSGRNSEK-FHIDPLRGAI 2524
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ F+I+
Sbjct: 2674 DP-FISEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVR 2731
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN S
Sbjct: 2732 PLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSSLG 2790
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2791 YTVTRVTTSDEDV 2803
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L + +VEN I Q A D D + + Y +
Sbjct: 874 TGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFTINEKNGTI 949
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ F+I+
Sbjct: 2672 DP-FISEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN S
Sbjct: 2730 PLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSSLG 2788
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGN 126
+ ++ SD D+ + Y I N
Sbjct: 2789 YTVTRVTTSDEDVGINAISRYSIMDAN 2815
>gi|355562512|gb|EHH19106.1| hypothetical protein EGK_19751 [Macaca mulatta]
Length = 3359
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 1004 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1063
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1064 DRETTAAYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1118
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1164
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 543 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 602
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 603 YSIVSASAFGSYFDISLYEG 622
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1503 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1562
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1563 GINSVLSYYITEGNKDMTFRMDRVSGEIA 1591
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1538 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMTFRMDRVSGEIATRPAPP 1597
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN PM P Y + E +
Sbjct: 1598 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1657
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ + Y I AGN + F ID G
Sbjct: 1658 SLITIQALDLDEGPNGTVIYAIVAGNIINTFRIDRHMG 1695
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1758 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1816
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1817 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1876
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1877 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1911
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 571 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 630
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 631 PLDYEQISNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 690
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 691 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEI 733
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2500 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2559
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2560 A-FHVDMDSG 2568
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 900 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 959
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND +P VY + E+ +
Sbjct: 960 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1019
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1020 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1050
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NID--- 53
++EN ++Q+ A+D D + + Y+I AG + +F ID
Sbjct: 2082 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFFIHPVTGVIRVGNATIDREE 2141
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ +D P I+ I ++++ND+ P L+P+ ++E+ I +
Sbjct: 2142 QESYRLTVVATDRGTVPLSGTAIITILIEDINDSCPEFLNPIQTVSVLESAEPGTVIANV 2201
Query: 106 AASDGDLDPDQRISYKI 122
A D DL+P ++ Y I
Sbjct: 2202 TAIDRDLNP--KLEYHI 2216
>gi|410908209|ref|XP_003967583.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2990
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S+F++ + ++ P + VY+ + +VNDNVP +Y A + E + ++Q++
Sbjct: 1128 SFFSLRVRAQNVAAVPLAAFTTVYVNITDVNDNVPFFTSSIYEASVTEGAQIGMSVLQVS 1187
Query: 107 ASDGDLDPDQRISYKI---SAGNPESYFNID 134
A D DL + +I+YK+ S+G+ S F ID
Sbjct: 1188 AHDKDLGLNGQITYKLLSDSSGD-HSLFRID 1217
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTG--- 60
+Y + EN L +V ++A+D D + ++ Y+I++GN F+I ++G+
Sbjct: 1283 LYEVGVDENADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGVFDIEPEVGTIFVAQPL 1342
Query: 61 ----------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIV 103
G + Y V + V N ND P+ YY + E G + ++
Sbjct: 1343 DYEQQKRFKLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVL 1402
Query: 104 QLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D D DQ I Y I ES+F I+ +G +
Sbjct: 1403 QVTATDPDKDADQGAIRYSIHGQGAESHFVINDITGEM 1440
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 40/172 (23%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDI-------- 54
+Y A + E + ++Q++A D DL + +I+YK+ S+G+ S F ID
Sbjct: 1168 IYEASVTEGAQIGMSVLQVSAHDKDLGLNGQITYKLLSDSSGD-HSLFRIDPELGIIYTE 1226
Query: 55 --------------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G + D Y+ V+I +VNDN P+ +Y
Sbjct: 1227 AVFDREARSSYLLEVQSEDSQESARPGKNKQPNSDTAYVRVFIS--DVNDNKPVFAQRLY 1284
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ EN L +V ++A+D D + ++ Y+I++GN F+I+ G++
Sbjct: 1285 EVGVDENADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGVFDIEPEVGTI 1336
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 29 GDLDPDQRISYKISAGNPESYFN-IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
G + P R+ Y+ P + + + +D P V +++ N+ND P PV
Sbjct: 685 GTIFPAGRLDYE----RPNHLYEFVVMATDGGNEPHSGTTTVRVRMANINDEAPEFSQPV 740
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y + E+ + + A D D D I Y I+AGN E F ID G
Sbjct: 741 YRTFVSEDAGPNTLVATVLAKDPDGDG---IIYSITAGNEEGNFVIDSQKG 788
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S LT
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALT 1270
Query: 60 GG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINEKTGQI 3355
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVTEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
>gi|313236914|emb|CBY12163.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY +I EN IVQ+ A D D + ISY+IS E+ F ID +
Sbjct: 454 VYNGEIAENNEIGDTIVQITAFDPDFGKNAEISYEISEH--ENLFVIDPETADLKALVSF 511
Query: 57 DLTGGPDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D PD + + + ++++N+NDN P+ +P + EN+
Sbjct: 512 DAELFPDPISINIIATDNGSPRLSASTNFLLKIRNLNDNAPVFENPSSKISVKENKPIGT 571
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I QL A+D DL+ + S+K S+F ID +G
Sbjct: 572 FITQLTAADADLNDEINYSFKTKT----SFFTIDSATG 605
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
E YF I D + + I++++VNDN P VY +I EN IVQ+
Sbjct: 414 EEYFLTLIARDNGTSAQETLKSISIKIEDVNDNAPSFKHDVYNGEIAENNEIGDTIVQIT 473
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNID 134
A D D + ISY+IS E+ F ID
Sbjct: 474 AFDPDFGKNAEISYEIS--EHENLFVID 499
>gi|347543913|gb|AEP02529.1| CDH23, partial [Taphozous melanopogon]
Length = 3205
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F+I +G
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSIGYRDAVVRTVVGL 1048
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ + Y A + E+
Sbjct: 1049 DRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFMQSSYEASVPEDIPEG 1108
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D R+ Y+I GN + F I I G L
Sbjct: 1109 HSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISDGLL 1149
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 528 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 587
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 588 YSIVNASAFGSYFDISVYEG 607
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G IVQ+ A+D D+
Sbjct: 1488 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAIVQVRATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1548 GINSLLSYYITEGNEDMTFRMDRTSGEIA 1576
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G IVQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1523 YNVSVNENVGGGTAIVQVRATDRDIGINSLLSYYITEGNEDMTFRMDRTSGEIATRPAPP 1582
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1583 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQRPHYEIFLDEGPDTVNA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F+ID +G
Sbjct: 1643 SLITIQALDLDEGPNGTVTYAIIAGNIINTFHIDRHTG 1680
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1805 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPISSFVAHIL 1864
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1865 ASDADSGCNALLTFNITAGNRERAFSINATTG 1896
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 556 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 615
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 616 PLDYEQIPNGMIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 675
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 676 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 718
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 885 FVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINGSSGVVVTTTELD 944
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 945 RERITEYQLRVVATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F+I
Sbjct: 1005 VWLNCTDNDVGLNAELSYFITGGNVDGKFSI 1035
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y A + E+ IVQL A+D D R+ Y+I GN + F I I L
Sbjct: 1097 YEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISDGLLMRGPKPL 1156
Query: 61 -------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
GP + + V + V++VND P+ Y + +GI
Sbjct: 1157 DREQDSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGT 1216
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+D D ++Y I +G E F ID +G
Sbjct: 1217 SVIVVKATDRDTGDGGLVNYCILSG-AEGKFEIDESTG 1253
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D + ++Y + G E
Sbjct: 2485 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMVATDQDEGSNGEVTYSLE-GPGE 2543
Query: 129 SYFNIDIGSG 138
F++D+ SG
Sbjct: 2544 EAFHVDMDSG 2553
>gi|330370538|gb|AEC12441.1| putative cadherin 1 [Oscarella carmela]
Length = 1668
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDL 58
P Y I EN ++ ++A D D +++Y I++GN + F I + L
Sbjct: 405 PSYTTNIEENAQVPSSVISVSAQDADKISKNKLTYSINSGNDQGSFEIKSTGEIVVAKSL 464
Query: 59 TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
VY + V + + ++ND P L+ + +I EN + +VQ
Sbjct: 465 DRERKHVYRMNVSVFDGLFTSSTSVTVNLDDINDVAP-ELELISDERIFENVANSTFVVQ 523
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A+D D+ ++ I Y +S P F ID SG +
Sbjct: 524 VSATDEDIGANKIIRYSLSGQRPAEAFRIDPVSGEI 559
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + F +D
Sbjct: 588 YNVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D+ P + + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDMGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + I Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + I Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------ 56
A I E+ S + ++A D D + I Y IS+GN E F I+ +
Sbjct: 3096 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 57 -----DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++T GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y I + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTG 3248
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPVFAQAMYKVEINENTLTGTDITQVFAADGDEGTNGQVRYGIVDGNAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F+I+ +G +
Sbjct: 2707 IINGNKEHSFSINHATGEI 2725
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTGVVTTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID-----IGSDLTGG----------------- 61
++A+DGD + + Y I +GN +F+I + + L GG
Sbjct: 497 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGLAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + F +D SG L
Sbjct: 617 TVRFSLQEAETDQRSFRLDPVSGRL 641
>gi|449673392|ref|XP_004207945.1| PREDICTED: protocadherin Fat 4-like [Hydra magnipapillata]
Length = 2166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 23/151 (15%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------------- 59
EN + +L A D D + ++ + I++GN + F I+ +L
Sbjct: 101 ENVETRTLVTKLNAVDIDEGLNAQVRFLITSGNTDGMFTINNQGELVTQKQPDRENIDFY 160
Query: 60 ---------GGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
G P VY IQ+ ++NDN P+ Y + ENQ I+++ A+D
Sbjct: 161 SLNITVHDLGDPSLSNTAVYTIQINDLNDNSPVFDRYRYILTVKENQLVNTIIIKINATD 220
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D+ ++ I+Y+I GN E+ F++D GSL
Sbjct: 221 IDIGINKEITYRILGGNKENVFSLDPNIGSL 251
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
IV + ASD D + + I YKI +GN S F ID I L + Y+I
Sbjct: 969 IVTVIASDKDSNLNAEIEYKIVSGN-NSVFEIDSKLGEVYIHKKLDREETETYIIEVAAV 1027
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ I V ++NDN P + VY + EN L ++QL A D D + +
Sbjct: 1028 DKGTPSLCTSVFITINVADINDNYPQFENDVYNISVKENLGAGLFLIQLRAFDIDKNENG 1087
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y I+A + ES F+I+ +G L
Sbjct: 1088 TVVYSINA-DFESLFSINESTGLL 1110
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 24/130 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGS-------- 56
Y + ENQ I+++ A+D D+ ++ I+Y+I GN E+ F++D IGS
Sbjct: 199 YILTVKENQLVNTIIIKINATDIDIGINKEITYRILGGNKENVFSLDPNIGSLTLIATLK 258
Query: 57 -------DLT------GGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
LT G P + ++ + I V++ ND P+ +D Y + EN +
Sbjct: 259 FRKQKKYTLTVAATDKGLPSRSFITFIEITVEDTNDFTPIFIDQPYVKSLNENVEIGTNV 318
Query: 103 VQLAASDGDL 112
+ + A D D
Sbjct: 319 LLINAKDNDF 328
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + ++NDN+P+ D Y I E S ++++ ASD D+ + + YKI +
Sbjct: 732 VVVTITDINDNMPLIEDKRYQISIKETVSFATFVLKITASDLDIGKNGQFVYKIKSSPNS 791
Query: 129 SYFNIDIGSG 138
+F I+ +G
Sbjct: 792 HHFFINSSTG 801
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 30/155 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG---- 60
P+ +VEN S + Q+ A+D D P+ +I Y++ NP+ F ID + TG
Sbjct: 877 PMITTAVVENWSVGHEVQQIHATDRDDGPNGQIVYEL-LRNPDQKFRID---ETTGWIYL 932
Query: 61 --------------------GPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G Q+ I V ++V+++ND+ P+ + Y I+E+ S
Sbjct: 933 NLPVDSSVRTYYLQVLVTDFGVPQLSSILNVTVEVRDINDHSPVFVQTRYQTDIIESISR 992
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
Q++A+D DL + ++Y ++ GN E+ F I
Sbjct: 993 NTQFFQVSATDQDLGQNGLVTYSVTQGNTENKFGI 1027
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y A I E P+V AA+D D + RI+Y I+ GN + F+I+ + D
Sbjct: 1195 YSASISETAMNNTPVVHAAATDPDAGENARITYYITDGNEGNQFHINPSTGQITLIGVLD 1254
Query: 58 LTGGPDQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
P + + V I V + NDN P+ + E
Sbjct: 1255 REAVPQYILTVSAVDHGTPQLLSTTTQVVITVLDENDNAPVFAQSARSVDVAETLEVGEL 1314
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I ++ASD D+D + I+Y I+ GN F ID SG L
Sbjct: 1315 ITIVSASDQDIDQNALINYIITGGNTYETFRIDQDSGYL 1353
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D +++VYI +VNDN P Y A I E P+V AA+D D + RI+Y I
Sbjct: 1172 DHAHIMVYIS--DVNDNAPQFHLSYYSASISETAMNNTPVVHAAATDPDAGENARITYYI 1229
Query: 123 SAGNPESYFNIDIGSGSL 140
+ GN + F+I+ +G +
Sbjct: 1230 TDGNEGNQFHINPSTGQI 1247
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT------ 59
Y + EN + + +++AS GD +SY IS+G+ ++ F ID + ++T
Sbjct: 779 YTFEFFENVALGHSVGRVSASTGD--QSSILSYAISSGDRDNVFQIDSVSGEITTAKEID 836
Query: 60 --------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
GGP +V I + + NDN P P+ +VEN S + Q+
Sbjct: 837 REVTPFYQLTVIVNGGPVVGQTLVNITISDKNDNSPEFPQPMITTAVVENWSVGHEVQQI 896
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D P+ +I Y++ NP+ F ID +G
Sbjct: 897 HATDRDDGPNGQIVYEL-LRNPDQKFRIDETTG 928
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIV--QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
YY +I ENQ + Q++A+D D R++Y I GN + F+ID S +
Sbjct: 672 YYGEIDENQPAGTTVKHGQVSATDLDFGSYGRVAYTIIQGNSDGRFSIDRNSGVIIATTS 731
Query: 60 ------------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG + Y V+I V ++ DN P Y + EN +
Sbjct: 732 LDREQKNSYQLIINAQDDGGRSAIPYATVHITVVDILDNPPQFDKLGYTFEFFENVALGH 791
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +++AS G D +SY IS+G+ ++ F ID SG +
Sbjct: 792 SVGRVSASTG--DQSSILSYAISSGDRDNVFQIDSVSGEI 829
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
Y +VNDNVP+ DP Y A ++E+ +V++ A+D D P+ ISY I+AG+
Sbjct: 1917 CYFSTTDVNDNVPI-FDPSSYDAHVIEDVDVGYSVVKVTATDADAGPNGAISYSITAGDD 1975
Query: 128 ESYFNI 133
F I
Sbjct: 1976 GEEFQI 1981
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + +Q+VNDN P Y +++EN Q+ A+D D+ + I Y I+ GN
Sbjct: 2125 ITVIIQDVNDNAPAFSSESYKVEVMENMPTGKEFFQVVATDADVGNNAIIEYHITNGNYN 2184
Query: 129 SYFNIDIGSGSLG 141
+ F+ID +G L
Sbjct: 2185 NDFSIDTHTGVLA 2197
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 27/148 (18%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--------------- 46
DP Y A ++E+ +V++ A+D D P+ ISY I+AG+
Sbjct: 1931 FDPSSYDAHVIEDVDVGYSVVKVTATDADAGPNGAISYSITAGDDGEEFQILEDGTIVTA 1990
Query: 47 -------ESYFNIDIGSD---LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ Y+++DI + L G P V I + +VNDN P + E+
Sbjct: 1991 KELDRELKEYYSLDITASDQPLEGTPQTATARVSIVIGDVNDNAP-EFQNTNLTTVSEDA 2049
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISA 124
+V+L A+D D + + Y + +
Sbjct: 2050 GAYTTVVELVATDADAGDNGDVDYSMES 2077
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV--QLAASDGDLDPDQRISYKISAGN 126
V ++V ++NDN P+ YY +I ENQ + Q++A+D D R++Y I GN
Sbjct: 653 VNLKVGDLNDNSPIFYPVNYYGEIDENQPAGTTVKHGQVSATDLDFGSYGRVAYTIIQGN 712
Query: 127 PESYFNIDIGSG 138
+ F+ID SG
Sbjct: 713 SDGRFSIDRNSG 724
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y+ + V +VNDN P+ + VY+A ++E + +V ++A D D + ++ Y + +
Sbjct: 2647 YISCTVHVTDVNDNAPVFTERVYFASVLEGEDSGTSVVTVSAIDHDSGSNGQVLYLLQSA 2706
Query: 126 NPESYFNIDIGSGSL 140
+ F ID +G L
Sbjct: 2707 TDD--FAIDSQTGEL 2719
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI--VENQSGILPIV------QLAASDGDLDPDQRISY 120
VY+ V ++NDN P D YYA I VE+ +G+ V + +D D+ + I Y
Sbjct: 2441 VYVTVVDINDNDPAFEDLPYYAVIKEVEDYTGLTGAVADTYIYAASTNDADIGTNGLIHY 2500
Query: 121 KISAGNPESYFNI 133
IS NP+S F I
Sbjct: 2501 AISKSNPQSKFKI 2513
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81
+Q+AAS LD ++ Y ++ +F D GS P + + I V + ND+ P
Sbjct: 406 IQVAAS---LDRERISQYNLT------FFVKDFGS----PPRYTFAYLIIYVTDANDHAP 452
Query: 82 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y + E+ + L A+D D D + +I Y+I+ GN +F ID +G
Sbjct: 453 EFEYEQYEVTLSEDLPSGSFVESLTATDEDADLNAQIFYRITEGNDLDWFEIDENTG 509
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF------NIDIGSDLTG 60
Y I+E+ S Q++A+D DL + ++Y ++ GN E+ F N+ + + L
Sbjct: 982 YQTDIIESISRNTQFFQVSATDQDLGQNGLVTYSVTQGNTENKFGIFPDGNLYVKNALDR 1041
Query: 61 GPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+Y I V I V + NDN P+ Y ++E S + +
Sbjct: 1042 ENTDIYTITVVASDNGVPQRSSSAVVTIHVLDANDNRPLFNLQDYSFFLLEELSPNVYVG 1101
Query: 104 QLAASDGDLDPDQRISYKIS 123
++ A+D D+ + +SY+ +
Sbjct: 1102 KVTATDADIGRNAELSYRFT 1121
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 34/150 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNIDIGS--------- 56
Y EN S + ++ ++A D DL +PD SY+I GN + F ID +
Sbjct: 3410 YVGNTRENSSIGVSVLTVSAEDYDLNEPDNLFSYEIVGGNINNAFAIDQQTGVISTSAVL 3469
Query: 57 --------DLT------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT G P Q Y V I + +VNDN PM + ENQS
Sbjct: 3470 DREEIQLYNLTVAAVDGGNPPQTGYAEVEISIDDVNDNGPMFYPEDTVGSVYENQSPGTS 3529
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYF 131
++ L+A DPD ++ G P SY+
Sbjct: 3530 VMILSA----YDPDTPVN-----GAPFSYY 3550
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 25/161 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------DIGS 56
DP Y + EN I+ + A+D D+ + I Y ++GN + F I +
Sbjct: 3089 DP-YSETVFENAQIGSSILTVLATDNDVGKNGDIRYSFASGNDDGLFAIGSENGVITVAE 3147
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+L +++ V + + +VNDN P Y I EN
Sbjct: 3148 ELDFEAQDTHILNVSARDLGVISLESFARVDVVLIDVNDNSPEFESQEYNPTIPENSPSG 3207
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V A+D D + I YKI G+ + YF I+ +G++
Sbjct: 3208 TSVVTCVATDADSTSNAVIVYKIIGGDGQYYFVINRQNGTI 3248
>gi|405976645|gb|EKC41145.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1550
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQ-LAASDGD-LDPDQRISYKISAGNPESYFNID------ 53
T +Y + G+ ++Q LAA+D D P+ +SY I++GN ES F ID
Sbjct: 490 TFGSTFYETSIAENIGVGTLIQDLAATDIDSAGPNSAMSYSIASGNAESKFEIDTSGQLK 549
Query: 54 IGSDLTGGPDQVYL-----------------IVYIQVQNVND--NVPMTLDPVYYAQIVE 94
+ + L ++Y+ IV +QV NVN+ +T Y + E
Sbjct: 550 LSATLDAETTKIYMLTVVATDAGTPPLTGTTIVLLQVTNVNEYQTEFLTTGGAYSHTLAE 609
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
N + L + + DLD I+Y I+ GN S F +D SG++
Sbjct: 610 NTA--LGTLIFTVTAQDLDVGSAITYAITVGNDNS-FTVDRQSGNI 652
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ-LAASDGD-LDPDQRISYKISAGN 126
+ + V + NDN P Y I EN G+ ++Q LAA+D D P+ +SY I++GN
Sbjct: 477 ITVTVVDNNDNPPTFGSTFYETSIAENI-GVGTLIQDLAATDIDSAGPNSAMSYSIASGN 535
Query: 127 PESYFNIDIGSGSL 140
ES F ID SG L
Sbjct: 536 AESKFEIDT-SGQL 548
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T Y + EN + L + + DLD I+Y I+ GN S F +D S
Sbjct: 597 LTTGGAYSHTLAENTA--LGTLIFTVTAQDLDVGSAITYAITVGNDNS-FTVDRQSGNIY 653
Query: 57 -------------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
LT G D ++ + + +VNDN P+ VY Q++EN
Sbjct: 654 LTKLLDRETTPSYSLTITASNGQGDVTNAVLALTITDVNDNDPVFSQNVYTGQVIENYPI 713
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ ++ +D D ++ ++ I AGN + F I
Sbjct: 714 GGSVTRVTCTDTDSGVNKDLTLSIVAGNTGNAFRI 748
>gi|426365076|ref|XP_004049614.1| PREDICTED: cadherin-23-like [Gorilla gorilla gorilla]
Length = 725
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 81 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 140
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 141 YSIVSASAFGSYFDISLYEG 160
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 35/167 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI---------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 108 AYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVS 167
Query: 55 ------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 168 RPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENI 227
Query: 97 SGILPIVQLAASDGDLDPD---QRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + + I Y + + F I+ SG +
Sbjct: 228 MAGATVLFLNATDLDRSREYGQESIIYSLEG---STQFRINARSGEI 271
>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
Length = 5168
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----- 56
+P Y IV EN+ I+ ++A+D D P+ + Y IS GN +YFN++ +
Sbjct: 3237 FNPRSYQVIVPENEPIGTTIITVSATDKDTGPNGMLHYAISGGNERNYFNVNERTGAIII 3296
Query: 57 -------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
DL ++ I + +VNDN P+ Y+ I EN+
Sbjct: 3297 MQPLDYDLMQEYHLNISVKDLGYKALTALAMLTIILTDVNDNPPVFNQSEYHGYIAENKP 3356
Query: 98 GILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
+ Q A+D D + I Y ++ G +F+I++ +G++
Sbjct: 3357 VGTAVFQAHATDKDSPKNAIIHYSFLARGTDHHFFSINVSNGTI 3400
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+Y+N+ IG+ TG P Q V I + ++NDN P I EN+ I+ LA
Sbjct: 3623 AYYNLVIGAIDTGLPPQTGTATVRIDLDDINDNGPTFSSDGLLGYISENEPAGTSIITLA 3682
Query: 107 ASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
ASD DL + SYKI G +++F ID +G
Sbjct: 3683 ASDPDLPHNGAPFSYKIVGGKHKAWFTIDKYTG 3715
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------------------ 48
Y ++E LAASD DL P+ RI+Y+I GN +
Sbjct: 1061 YETSLLETTKVNTRFFALAASDSDLGPNGRIAYEIIDGNSDRKFGVFPDGFLFVRAPLDR 1120
Query: 49 ----YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
Y+ + I G P + ++ V I V + NDN P + + I EN +
Sbjct: 1121 EERDYYALTISCSDAGTPSRSSVVPVVIHVIDENDNPPQFTNSTFTFNIPENAPANTFVG 1180
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+L A D D+ + +S+ + + + + F ID +G
Sbjct: 1181 KLTAVDRDIGRNAELSFSVLSQSQD--FKIDTHNG 1213
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 48 SYFNIDIGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPIV 103
S F +++ + G P DQ +IV V + N + P +P Y IV EN+ I+
Sbjct: 3201 SRFELNVRATDRGVPPLSDQTRVIVV--VTDENRHAP-EFNPRSYQVIVPENEPIGTTII 3257
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A+D D P+ + Y IS GN +YFN++ +G++
Sbjct: 3258 TVSATDKDTGPNGMLHYAISGGNERNYFNVNERTGAI 3294
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 44 GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+P + F ++I + G P L + + + +VND+ P+ Y ++E
Sbjct: 1016 ADPGTVFYVEIIATDGGTPSLSSRLSLPVNIADVNDHTPVFDHTSYETSLLETTKVNTRF 1075
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
LAASD DL P+ RI+Y+I GN + F +
Sbjct: 1076 FALAASDSDLGPNGRIAYEIIDGNSDRKFGV 1106
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDI--GSDLTGG-- 61
Y+ I EN+ + Q A+D D + I Y ++ G +F+I++ G+ L+
Sbjct: 3347 YHGYIAENKPVGTAVFQAHATDKDSPKNAIIHYSFLARGTDHHFFSINVSNGTILSTASF 3406
Query: 62 ----------------PD---QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD + Y ++Y+ V VN+ P + ++ + E S +
Sbjct: 3407 DYEERRSYTLHIKAKNPDSSMESYAVLYVHVLGVNEFYPQFVQSAFHFDVSETSSVGTAV 3466
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+D D+ D RI Y + + + F I+ +G
Sbjct: 3467 GSVQATDKDIGEDGRIYYLLVGSSNDKGFGINTNTG 3502
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I++ +VNDN+P+ DP Y A + EN S ++Q++A+D D + R+ Y I +G+
Sbjct: 2273 IKILDVNDNIPV-FDPKQYSASVAENASIGAMVLQVSATDMDEGDNGRVRYSIVSGDQNR 2331
Query: 130 YFNIDIGSG 138
F+I +G
Sbjct: 2332 DFSISEDTG 2340
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
LD + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 209 LDNKFRLVTTTNPSGDTSYLHLETT-GNLDRESRGSYQL-----------NISASDGGSP 256
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
++ +L V + + +VNDN P+ Y + E P++Q+ ASD DL + +++Y
Sbjct: 257 PRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNETVMPGSPVLQVMASDNDLGDNSKLTYY 316
Query: 122 ISAGNPESYFNIDIGSG 138
++ E F +D +G
Sbjct: 317 LA--ETEHQFTVDPETG 331
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 48 SYFNIDIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S +N+ + + G P++ YLI I V +VND+ P+ Y A + E +
Sbjct: 472 SKYNLTVVAIDKGTPERKAIAYLI--IDVNDVNDHEPVFEKSEYTAVLSELAPTGTFVTS 529
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+D D + ++ Y+I GN +FNID +G
Sbjct: 530 IVATDEDTGVNAQVFYEILTGNELKWFNIDTTTG 563
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V + NDN P ++E +++ ASD D + ++ + I+AGN
Sbjct: 1377 ITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGMNSQVVFSITAGNRR 1436
Query: 129 SYFNIDIGSGSL 140
F+ID SGSL
Sbjct: 1437 DTFHIDSVSGSL 1448
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 43/172 (25%)
Query: 3 LDPVYYAQIVENQSGILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNID--- 53
LD Y A+++EN LP ++ + A D D P + ++ Y + GN + F I+
Sbjct: 2392 LDSPYIARVMEN---TLPPNGGYLLTVTAFDADTPPLNNQVRYFLKEGNAD-LFRINAST 2447
Query: 54 ---------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
+ D P IV ++VQ++NDN P+ Y+A I
Sbjct: 2448 GDIVLLGTLDRELQNEYILTLVAMDTGSPPLSNTGIVRVEVQDINDNGPVFELQYYHASI 2507
Query: 93 VENQSGILPIVQL----AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
EN LP+ L A+D D + ++ + + G S+F+ID +G +
Sbjct: 2508 QEN----LPVGSLVLKPVATDKDTGLNGKLRFDL-LGEHMSHFHIDTDTGEI 2554
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VYIQ ++NDN P +Y A I E+ + +++++ASD D + + Y I
Sbjct: 1168 DQAKVQVYIQ--DINDNPPKFTKDIYQASISESAPNMTQLLRVSASDVDESKNGVVHYHI 1225
Query: 123 SAGNPESYFNIDIGSGSL 140
+ GN E+ F ID SG +
Sbjct: 1226 AEGNEEAQFTIDSSSGQV 1243
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------- 61
I ++A+DGD + + Y + +GN +F+I S L
Sbjct: 472 IKGVSATDGDSGQNANLRYSLVSGNSLGWFSISDNSGLVTSAALLDREVASEIVLNISAK 531
Query: 62 -----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND VP Y+ ++E+ ++ L+ASD DL P+
Sbjct: 532 DQGLQPKISYTKLIVSITDVNDQVPTFTQSTYHVSLLEHAPAGTELLVLSASDSDLGPNG 591
Query: 117 RISYKISAGNPES---YFNIDIGSGSL 140
I + A P S F +D SG L
Sbjct: 592 TIRFSFDAETPASLRELFRLDAVSGRL 618
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y A I E+ + +++++ASD D + + Y I+ GN E+ F ID
Sbjct: 1190 IYQASISESAPNMTQLLRVSASDVDESKNGVVHYHIAEGNEEAQFTIDSSSGQVTLVGKL 1249
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I D P ++ I + + NDN P ++EN
Sbjct: 1250 DYESSSSYLLKIIADDAGDVPLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGDL 1309
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A+D D + I+Y I+A N F+I +GS+
Sbjct: 1310 VVSVTATDADSGQNADITYSITAINNHGTFSISPNTGSI 1348
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNID-IGSDLTGG 61
Y+ ++E+ ++ L+ASD DL P+ I + A P S F +D + L+
Sbjct: 562 TYHVSLLEHAPAGTELLVLSASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSGRLSTA 621
Query: 62 -----PDQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSG 98
DQ +++I+ + ++NDN P+ Y+A + EN+
Sbjct: 622 VELDREDQASYLLHIRAADAGSPPLHSVGRVNITLWDINDNRPVFYPVQYFASVKENEPP 681
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD DL + + Y IS+G+ + F+I +G +
Sbjct: 682 GSYVTTVLASDRDLGRNGTVKYVISSGD-TTKFHIHSNTGKI 722
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 37/150 (24%)
Query: 25 AASDGDLDPD--QRISYKISAGNPESYFNIDI-------GSDL----TGGPDQV------ 65
A+D D+ + +Y+I GN + F +DI G+ L TGG D+
Sbjct: 143 TATDADIGSNGVDHTTYRIVEGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDRELTPFYQ 202
Query: 66 ---------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
YL V + +Q++NDN P+ Y++ + E+ + I+Q+ ASD
Sbjct: 203 LLIEVEDKGVPKKFGYLQVNVTIQDINDNPPVFEQDQYHSSVFEDAAVGSSILQITASDQ 262
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D + I Y + G P F ID +G++
Sbjct: 263 DEGANAEIRYILDEGTP---FQIDPKTGTI 289
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 27/154 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y ++ EN ++Q+ ASD D + +I + IS+GN S F ID
Sbjct: 2137 IYDIEVEENILTGTDVIQVFASDADDGSNGQIRFSISSGNTNSDFRIDSVTGVISVAKRL 2196
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P + V I + +VND P+ Y + EN LP
Sbjct: 2197 DRETRSAYSLVVQAADRGSSPRVDHATVNIVLLDVNDCSPLFELSPYTINVQENLEN-LP 2255
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
I+Q+ A D D + ++SY +S G+ E F +
Sbjct: 2256 KDILQVVARDDDQGANSQLSYMLSGGDEEGAFTL 2289
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +Q++NDN P+ + V I EN I+QL A D D P+ ++Y I +G +
Sbjct: 1705 VEITLQDINDNPPVFANDVLDVTIEENIIDGFKIMQLTAKDADEGPNALVTYTIISGADD 1764
Query: 129 SYFNIDIGSGSL 140
S F ID SG L
Sbjct: 1765 S-FRIDPESGDL 1775
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D D R+ ++ +Y + +D P + V + V +VNDN P +Y
Sbjct: 2079 GTVDGDVRLIGELDREELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIY 2138
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ EN ++Q+ ASD D + +I + IS+GN S F ID +G
Sbjct: 2139 DIEVEENILTGTDVIQVFASDADDGSNGQIRFSISSGNTNSDFRIDSVTG 2188
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIG--------------------SDL 58
I ++A D D + + I+Y I++GN F N G S +
Sbjct: 3085 IRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLSLANPLDFEEKQQHELRVSAI 3144
Query: 59 TGG--PDQVYLIVYIQVQNVNDNVPMTLDP-VYYAQIVENQSGILPIVQLAASDGDLDPD 115
GG Y+ V IQV +VNDN P+ DP Y+ + EN +V++ A+D D P+
Sbjct: 3145 DGGWIAKTSYVSVTIQVTDVNDNPPI-FDPDEYFPTVQENVPSGTTVVRMNATDRDSGPN 3203
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
++Y I + + + F ID +G
Sbjct: 3204 AVMAYVIQSSDSD-LFVIDPNTG 3225
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + VY V ++NDN P+ Y + E+ IV + ASDGD + ++
Sbjct: 1900 GGGLASTVRVYFNVLDINDNPPVFSSSAYSTSVSESLPPGSSIVTVEASDGDDGANAQLL 1959
Query: 120 YKISAGNPESYFNI 133
YKI++G+P+ +F I
Sbjct: 1960 YKIASGDPQGHFVI 1973
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 50 FNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + TG P + V + ++++NDN P YA+++ENQ + L AS
Sbjct: 3453 YNLTVLAVDTGTPPATGIATVIVNLEDINDNGPTLT--TTYAEVMENQRAGTAVATLTAS 3510
Query: 109 DGDLDPDQ 116
D DL P+Q
Sbjct: 3511 DPDLPPNQ 3518
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGN-----------------------PESYFNIDIGSD 57
+V + A+D D + I+Y I+A N +S++ ++I +
Sbjct: 1310 VVSVTATDADSGQNADITYSITAINNHGTFSISPNTGSIFLVKKLDYETQSFYKLNITAK 1369
Query: 58 LTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + I V + V++ NDN P+ + I EN ++ + A D D D +
Sbjct: 1370 DNGRPARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTITAHDTDADING 1429
Query: 117 RISYKISAGNPE-SYFNIDIGSG 138
++ Y I P +YF ID SG
Sbjct: 1430 QLEYSIVQQVPRGNYFGIDPSSG 1452
>gi|327271397|ref|XP_003220474.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Anolis carolinensis]
Length = 2944
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 36/171 (21%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NP--- 46
DPV+ Q + EN ++ + A+DGD P+ I Y + G +P
Sbjct: 290 DPVFEQQEYKESMRENLEVGYEVLTVRATDGDASPNANILYHLLNGRGVNKIFEIDPKSG 349
Query: 47 -------------ESYFNI----DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
ESY I D G D GP ++I V++ NDN P + Y
Sbjct: 350 VIRTNGLVDREAVESYQLIVEANDQGRD--PGPRSTTATIHITVEDDNDNSPQFSEKRYV 407
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ EN + ++++ A+D D + + Y I +GN F ID +G++
Sbjct: 408 VQVPENVASNTHVLRVNATDRDKGSNALVHYSIMSGNTRGQFYIDAQTGNI 458
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ EN + ++++ A+D D + + Y I +GN F NID+ S L
Sbjct: 406 YVVQVPENVASNTHVLRVNATDRDKGSNALVHYSIMSGNTRGQFYIDAQTGNIDVVSQLD 465
Query: 60 ----------------GGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + +V IQV +VNDN P+ + + + ++EN
Sbjct: 466 YEMNKEYSLRIRAQDGGRPPLSNISGLVAIQVLDVNDNSPIFVSTPFQSTVLENVPVGYS 525
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y + + + F+I+ +G
Sbjct: 526 VIHIQAIDADSGENARLEYALVDISSDFPFSINNNTG 562
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I V +VNDN P+ + + EN L + ++ ASD D + +I Y+I GN
Sbjct: 909 VHITVLDVNDNPPVFEQDEFDIFVEENSPIGLVVARITASDPDEGTNAQIMYQIVEGNIP 968
Query: 129 SYFNIDIGSGSL 140
F +DI SG L
Sbjct: 969 EVFQLDIFSGEL 980
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 12 VENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPD 63
VE S I L + ++ ASD D + +I Y+I GN F +DI S DL
Sbjct: 932 VEENSPIGLVVARITASDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALMDLDYETK 991
Query: 64 QVYLI--------------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQL 105
Y+I V++++++ NDN+P+ + + + + N+S P I ++
Sbjct: 992 SEYVIVVQATSAPLVSRATVHVRLRDKNDNIPILKNFEIIFNNYITNRSSSFPTGVIGRI 1051
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D+ +SY GN ++ +G L
Sbjct: 1052 PASDPDV--SDTLSYSFEQGNELKLVLLNHSTGEL 1084
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 26/138 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++ +V ++A+D D + RI+Y + P+ ++D G+ T
Sbjct: 719 YTVNINEDRPVGTTVVIISATDEDTGENARITYFMEDSIPQFKIDMDTGAVTTQMDLDYE 778
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D YL I V +VNDN P L Y + E+ +
Sbjct: 779 DQVSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNAPQFLRDNYQGSVYEDVPAFTSV 836
Query: 103 VQLAASDGDLDPDQRISY 120
+Q++A+D D + R+ Y
Sbjct: 837 LQVSATDRDSGLNGRVFY 854
>gi|427780029|gb|JAA55466.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
pulchellus]
Length = 1719
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 20 PIVQLAASDGDLDPD-QRISYKISAGNPESYFNID---------------------IGSD 57
P+ L A DPD + Y ++ GN E F ID +
Sbjct: 1342 PVNHLVAIVHASDPDGDALWYSLAGGNEEGKFMIDCEHGFIKLARPLDREICASYNLTVQ 1401
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+T G + +V+++V + NDN P+ + +Y ++ E+ S I+QL A+D D DQR
Sbjct: 1402 VTDGSAKASAMVHVEVLDANDNWPVFSESLYQVEVSESSSPGTEILQLTATDA--DEDQR 1459
Query: 118 ISYKISAG---NPESYFNIDIGSGSL 140
+ Y I SYF +D +G L
Sbjct: 1460 LFYSIHNSEQVTSNSYFVLDSDTGVL 1485
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
+ V A + ENQ + LAA+D ++ I+Y I+ GN F ID
Sbjct: 1035 EQVSSATVDENQPPGTSVTTLAATD-----EEDITYTITGGNGLGMFTIDSNGVVRTHVS 1089
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ DL+ P + ++ +++ V+++ND +P+T P Y + E+ +
Sbjct: 1090 LDHEACAHYWITVVARDLSPVPLEAFVDLHVAVRDLNDQLPLTELPAYAVTVAEHSTSGA 1149
Query: 101 PIVQLAASD 109
I+ + A D
Sbjct: 1150 AILTMTARD 1158
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------DLT 59
+ A D D + R+ Y IS+G+ S F +D+ + D
Sbjct: 720 IQAKDPDHGYNGRLVYVISSGDQHSCFRVDMHTGALLLVAALDYELAPSHLLNVTAYDQG 779
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
P ++++V +VNDN P+ P Y I E+ + +L A+D D + +
Sbjct: 780 QPPRSTSQTMFVRVLDVNDNAPLFEKPAYSFVINEDAPNGTSVARLRAADADQGRNAELH 839
Query: 120 YKISAGNPESYFNIDIGSGSL 140
+ +S+ F++D +G L
Sbjct: 840 FILSS----EQFHLDSETGLL 856
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGP---DQVYLIVYIQVQNVND 78
L + D+DPD + + + E++ +N+ + + G P +IV ++ N N
Sbjct: 969 LDTENFDVDPDTGLVRLAAMLDFETWRLYNVTVQAHDCGDPPLTSVTNMIVEVEDVNENL 1028
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ P + V A + ENQ + LAA+D ++ I+Y I+ GN F ID
Sbjct: 1029 HAPSFAEQVSSATVDENQPPGTSVTTLAATD-----EEDITYTITGGNGLGMFTID 1079
>gi|307184762|gb|EFN71076.1| Protein dachsous [Camponotus floridanus]
Length = 2212
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 59 TGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T GPD + Y+ V +++ +VNDN P+ Y A ++E + +V+L+A D D +
Sbjct: 1045 TTGPDVLEAYVKVIVRLSDVNDNPPIFTQTQYSATVLEGNTKGDFVVKLSADDADQGLNS 1104
Query: 117 RISYKISAGNPESYFNI 133
RI Y I GNP++ F I
Sbjct: 1105 RILYHIVDGNPDNAFTI 1121
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 1930 AFSVLTLTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 1989
Query: 125 GNP-ESYFNIDIGSGSL 140
P F++D SG++
Sbjct: 1990 SQPARGLFHVDPASGTI 2006
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2343 TQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAVSEDTPVGAELLHVE 2402
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2403 ASDADPGPHGLVRFTLSSGDPAGLFELDESSGAL 2436
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 580 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTQ 639
Query: 57 --DLTGGPDQ------------VYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGIL 100
D GP + IVY++V + NDN P Y A +
Sbjct: 640 TLDRDQGPSSFDFTVTAVDGGGLKSIVYVKVFVSDENDNPPQFYPREYAASLSAQSPPGT 699
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R+SY I AGN F +D SG L
Sbjct: 700 AVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLL 739
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1473 LDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPAFGSAH 1532
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1533 LSLEVPEGQDPQT-LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFG 1585
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
GDLD + R Y + E+Y D GS P + ++ + + ++ND+ P Y
Sbjct: 208 GDLDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDHAPAFNQSRY 257
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSGSL 140
+A + E+ + P++Q+ ASD D D + ++Y+I+ E F+ID +G L
Sbjct: 258 HAVVSESLAPGSPVLQVYASDADADANGAVTYEINRRQSEGDGPFSIDAHTGLL 311
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G+ +F+ID S +
Sbjct: 489 VVRVTARDPDQGTNGQVTYSLAPGSHTRWFSIDPTSGIITTAASLDYELEPQPQLIVVAT 548
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 549 DGGLPPLTSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 608
Query: 117 RISYKISAGNPESY---FNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 609 LLSYSLGAGLGASGSPPFRIDAHSG 633
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD----------------- 63
+ L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1546 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEAR 1605
Query: 64 -------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
L+V + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1606 DGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANG 1665
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y + AG ++ ++ SG L
Sbjct: 1666 HVTYYLGAGAAGAFL-LEPSSGEL 1688
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P+ +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2131 GPHEGRANLTVLVEDVNDNAPVFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGHISY 2190
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F++D +G+L
Sbjct: 2191 HLA--SPAEGFSVDPNNGTL 2208
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 28/143 (19%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSD 57
+ + A D DL R++Y+++AG + YF + + SD
Sbjct: 1342 LHVVARDPDLGEAARVTYRLAAGG-DGYFRLHPSTGALSLVRPLDREHRAEHLLTVVASD 1400
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++ + V +VND P Y + EN ++ L A+D DL + +
Sbjct: 1401 HGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ 1460
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
++Y +G F++D +G L
Sbjct: 1461 VTYGGISGE---SFSLDPDTGVL 1480
>gi|284925128|ref|NP_001165401.1| cadherin-23 isoform 3 precursor [Homo sapiens]
Length = 1381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 20 PIVQLAASDGDLDPD-QRISYKISAGNPESYFNID---------------------IGSD 57
P+ L A DPD + Y ++ GN E F ID +
Sbjct: 1317 PVNHLVAIVHASDPDGDALWYSLAGGNEEGKFMIDCEHGFIKLARPLDREICASYNLTVQ 1376
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+T G + +V+++V + NDN P+ + +Y ++ E+ S I+QL A+D D DQR
Sbjct: 1377 VTDGSAKASAMVHVEVLDANDNWPVFSESLYQVEVSESSSPGTEILQLTATDA--DEDQR 1434
Query: 118 ISYKISAG---NPESYFNIDIGSGSL 140
+ Y I SYF +D +G L
Sbjct: 1435 LFYSIHNSEQVTSNSYFVLDSDTGVL 1460
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
+ V A + ENQ + LAA+D ++ I+Y I+ GN F ID
Sbjct: 1010 EQVSSATVDENQPPGTSVTTLAATD-----EEDITYTITGGNGLGMFTIDSNGVVRTHVS 1064
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ DL+ P + ++ +++ V+++ND +P+T P Y + E+ +
Sbjct: 1065 LDHEACAHYWITVVARDLSPVPLEAFVDLHVAVRDLNDQLPLTELPAYAVTVAEHSTSGA 1124
Query: 101 PIVQLAASD 109
I+ + A D
Sbjct: 1125 AILTMTARD 1133
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------ 52
P Y A + + I +L A D D+ ++SY I GN F I
Sbjct: 2320 PAYTAVVDQRSRRGQFIARLLAMDPDVS--DQLSYAIVTGNEAQLFAINRSTGVVTVSSV 2377
Query: 53 ---------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++ +T G Q Y + + V+ N++ P VY A + EN +
Sbjct: 2378 PPAWPPTGFELNVSVTDGVYQSYTQLRLVVKASNEHSPRFSQSVYEAVVAENMLPGARVA 2437
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+L+A+D D R++Y I + + +F+I+ +G L
Sbjct: 2438 RLSATDPDQGVLGRLTYAIRSRDCALHFHINSTTGEL 2474
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------DLT 59
+ A D D + R+ Y IS+G+ S F +D+ + D
Sbjct: 720 IQAKDPDHGYNGRLVYVISSGDQHSCFRVDMHTGALLLVAALDYELAPSHLLNVTAYDQG 779
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
P ++++V +VNDN P+ P Y I E+ + +L A+D D + +
Sbjct: 780 QPPRSTSQTMFVRVLDVNDNAPLFEKPAYSFVINEDAPNGTSVARLRAADADQGRNAELH 839
Query: 120 YKISAGNPESYFNIDIGSGSL 140
+ +S+ F++D +G L
Sbjct: 840 FILSS----EQFHLDSETGLL 856
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG---------- 55
VY A + EN + +L+A+D D R++Y I + + +F+I+
Sbjct: 2421 VYEAVVAENMLPGARVARLSATDPDQGVLGRLTYAIRSRDCALHFHINSTTGELVTQEPL 2480
Query: 56 ------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
S GG + +V + V +VNDN P Y I N S ++
Sbjct: 2481 DHEHRHLYEVPVSATDGGGRLAFAVVRVAVTDVNDNEPTFGAAEYEVSIWTNTSVGTTLL 2540
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A D D R S + N + FNI SG L
Sbjct: 2541 KVRAFDQDQGNWLRYSLHEAPSNVSAIFNITHDSGEL 2577
Score = 35.0 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLTGGP---DQVYLIVYIQVQNVND 78
L + D+DPD + + + E++ +N+ + + G P +IV ++ N N
Sbjct: 944 LDTENFDVDPDTGLVRLAAMLDFETWRLYNVTVQAHDCGDPPLTSVTNMIVEVEDVNENL 1003
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ P + V A + ENQ + LAA+D ++ I+Y I+ GN F ID
Sbjct: 1004 HAPSFAEQVSSATVDENQPPGTSVTTLAATD-----EEDITYTITGGNGLGMFTID 1054
>gi|40807027|gb|AAH65284.1| CDH23 protein [Homo sapiens]
Length = 1381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + I Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I V +VND P VY + E+ +
Sbjct: 955 RERIAKYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
>gi|449266545|gb|EMC77591.1| Neural-cadherin, partial [Columba livia]
Length = 2420
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + +YI + +VNDNVP +Y A + E + +VQ++A+D DL + I+Y
Sbjct: 726 PLAAFTTIYINLTDVNDNVPFFTSSIYEASVTEGAAVGTFVVQVSATDLDLGQNGEITYS 785
Query: 122 I--SAGNPESYFNIDIGSGSL 140
+ +G +YF +D +GS+
Sbjct: 786 LLHDSGRDYTYFRLDSQTGSV 806
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 34/169 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNID--IGSDLT-- 59
+Y A + E + +VQ++A+D DL + I+Y + +G +YF +D GS T
Sbjct: 751 IYEASVTEGAAVGTFVVQVSATDLDLGQNGEITYSLLHDSGRDYTYFRLDSQTGSVYTAS 810
Query: 60 ----------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ 91
G P+ V + + +VNDN P+ VY
Sbjct: 811 VFDREKKGSYLLEVKSVDGSESARPGKHGKPNSDTAYVRVFISDVNDNKPVFTQSVYEVN 870
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+Q I+ + A+D D + ++ Y+I+AGN +++ +G++
Sbjct: 871 VDEDQDVGSAIITVTANDEDEGTNAKLRYQITAGNTGGVLDVEPETGAI 919
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+Q I+ + A+D D + ++ Y+I+AGN +++
Sbjct: 866 VYEVNVDEDQDVGSAIITVTANDEDEGTNAKLRYQITAGNTGGVLDVEPETGAIFIAQPL 925
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ SD G + Y ++ I V N ND P+ YY I+E G+ +
Sbjct: 926 DYEETKMYEIHLLASD---GKWEDYAVIIINVINKNDETPVFSINEYYGSIIEELDGLPV 982
Query: 101 PIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D + D+ + Y + F ID +GS+
Sbjct: 983 FVLQVMATDPDSNADEGDLRYSLHGHGAGDIFAIDEKTGSI 1023
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VND+VP ++ A I EN + ++Q+ A+D D+ + + + I G+P+
Sbjct: 1172 IWVADVNDHVPQFTKKMWQATIPENSAVDSEVLQVCATDSDVGENADLIFSIIGGDPDQK 1231
Query: 131 FNID 134
F I+
Sbjct: 1232 FYIE 1235
>gi|410169834|ref|XP_003960910.1| PREDICTED: cadherin-23-like [Homo sapiens]
Length = 1381
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGS-DLTGG- 61
VY A + E+ PI+QL A+D D ++ ISY+I N +F ID + ++T
Sbjct: 842 VYIASVSESMPPRSPIIQLFANDRDSGRNRLISYQILEERSNASKFFTIDSSTGEITTTQ 901
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P +V I V +VNDN P P Y A + E S
Sbjct: 902 VIDYEANQEFYIKVRAMDHGVPPLSSETLVAITVLDVNDNPPKFSQPQYQANVSEIVSCG 961
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D ++ Y I +GN + +F I+ SG
Sbjct: 962 HVVIKVQAFDPDSWNTSKLEYLILSGNEKRHFTINSTSG 1000
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG 125
+V +++++VNDN P VY A + E+ PI+QL A+D D ++ ISY+I
Sbjct: 823 VVEVEIEDVNDNRPAFSQMVYIASVSESMPPRSPIIQLFANDRDSGRNRLISYQILEERS 882
Query: 126 NPESYFNIDIGSGSL 140
N +F ID +G +
Sbjct: 883 NASKFFTIDSSTGEI 897
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V I V ++ND+VP +Y A E+ + ++ + A D D + +I+Y I AGNP
Sbjct: 1875 MVIINVTDINDHVPKFSQDLYVADTREDAAVGEIVLTVLADDKDGVMNNQITYSIVAGNP 1934
Query: 128 ESYFNIDIGSGSL 140
S+F ID +G +
Sbjct: 1935 LSHFIIDPQTGEI 1947
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID----------- 53
+Y IVEN L I L D D+ R ++ I+ G+ F+++
Sbjct: 1477 IYKGSIVENAEPGLMITTLKTIDTDISEQNRQVTCYITEGDVLGQFSVNEVDGEWKILSK 1536
Query: 54 ---------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
I SD G Q V I V +VNDN P Y +IVE+ S
Sbjct: 1537 APLNREDTDKYLLRVIASD---GKFQAATEVEISVLDVNDNSPECKQTPYKTKIVEDASQ 1593
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A+D D+ + +I Y + E F +D +G L
Sbjct: 1594 GFSVLKVSATDADVGSNGQIIYTLHGPGAED-FRLDPHTGEL 1634
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 48 SYFNIDIGSDLTG-GPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ ID+ + + D V L+ + I V++VNDN P+ Y A ++EN ++Q+
Sbjct: 1328 KWYQIDVLAHCSHQDTDLVSLVSINIHVKDVNDNKPVFEANPYRAFVMENMPTGTTVIQV 1387
Query: 106 AASDGDLDPDQRISYKISAG--NPESYFNIDIGSG 138
A+D D D +++Y + + N F ID SG
Sbjct: 1388 TANDQDTGSDGQVTYSLRSEPDNIRKLFTIDSESG 1422
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A + E S ++++ A D D ++ Y I +GN + +F I+ S
Sbjct: 948 PQYQANVSEIVSCGHVVIKVQAFDPDSWNTSKLEYLILSGNEKRHFTINSTSGIISTLNR 1007
Query: 57 ---------DLT-GGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
DLT D V+ VYI NVN P VY A + EN ++
Sbjct: 1008 CKRDLEPFYDLTVSASDGVFKTTVPVYINATNVNKYSPSFQQDVYEAVLAENAEIGTKVI 1067
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
+L A+D D P + Y I + F ID
Sbjct: 1068 ELLATDKDDGPYGTVDYIIINKLGQEKFAID 1098
>gi|390472322|ref|XP_002807487.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Callithrix jacchus]
Length = 3348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNLDGKFSVGYRDAIVRTVVSL 1056
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1057 DRETTATYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1111
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1112 DIPEGHSIVQLKATDADEGEFGRVWYRILQGNQGNNFRIHVSNGLL 1157
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIA 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA S F+I + G
Sbjct: 596 YSIVSASAFGSCFDISLYEG 615
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ++A+D D+
Sbjct: 1496 VASDRGTPPRKKAHILQVTILDINDNPPVIESPYGYNVSVNENVGGGTAVVQVSATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNQDMTFRMDRISGEIA 1584
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1751 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1809
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1810 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPISSFVA 1869
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1870 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1904
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ++A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTAVVQVSATDRDIGINSVLSYYITEGNQDMTFRMDRISGEIATRPAPP 1590
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E +
Sbjct: 1591 DREHQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVLLDEGPDTLNT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F+I+ +G
Sbjct: 1651 SLITIQALDLDEGPNGTVTYAIVAGNIINTFHINRYTG 1688
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ P F I+
Sbjct: 893 FVAEVLEGTPAGVSIYQVVAVDLDEGLNGLVSYRMQVAMPRMDFLINSSSGVVVTTAELD 952
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SDL + I V +VND +P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDLGTPTKSSTSTLSIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITGGNLDGKFSV 1043
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2489 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2548
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2549 A-FHVDVHSG 2557
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA S F+I +
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNQIAYSIVSASAFGSCFDISLYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 624 PLDYEQIPNGLIYLMVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEI 726
>gi|332029950|gb|EGI69775.1| Neural-cadherin [Acromyrmex echinatior]
Length = 1698
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 31/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
+Y A++ EN+ ++ + A D D RI Y+I++GN F + G+ G
Sbjct: 45 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAVKNMTGAIYVAGAL 102
Query: 63 ------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
+ Y V I V++VNDN P+ P Y QI E LP +
Sbjct: 103 DYETRKRYELRLTASDNLKENYTTVVIHVKDVNDNPPVFERPNYRTQITEEDDRTLPKRV 162
Query: 103 VQLAASDGDLDPDQRISY-----KISAGNP-ESYFNIDIGSGSL 140
+ + A+DGD D Q I Y I NP S F+I+ +G +
Sbjct: 163 LGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 206
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY-----KISAGNP-ESYFNID--- 53
P Y QI E LP ++ + A+DGD D Q I Y I NP S F+I+
Sbjct: 144 PNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 203
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 204 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 263
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKI 122
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 264 GNVTENGTAGMVVMTMTAVDYD-DPNEGTNARLIYSI 299
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN +++L ASD D P+ I+Y I + + + F ID G+ T G
Sbjct: 3233 YFPNVLENAPSGTTVIRLNASDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTITTQGFLD 3291
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3292 YETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIV 3351
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F ID SG +
Sbjct: 3352 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQIDERSGQI 3389
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + +Y++ ++NDN P L +Y A I E + + +++++ASD D + I Y +
Sbjct: 1226 DQATVQIYMK--DINDNAPKFLKDLYQATISELAANLTQVLRVSASDVDEGTNGLIHYSV 1283
Query: 123 SAGNPESYFNIDIGSGSL 140
GN E F ID +G +
Sbjct: 1284 IKGNEEKQFAIDSSTGQV 1301
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 36/160 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAGNPESYFNID- 53
Y + EN ++ L+A DGDL + I + + S+ P F +D
Sbjct: 611 YQVSLAENSPSGTELLVLSAVDGDLGDNGTIRFSLQEAEPAVVAVGPSSVTPRQVFRLDP 670
Query: 54 -----------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+ +DL P V + + +VNDN P+ Y+A
Sbjct: 671 VSGKLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQYFA 730
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I EN+ + ++A+D D+ P+ + Y ISAG+ +
Sbjct: 731 HIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGDTSRF 770
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y ++ EN ++Q+ A+DGD + ++ Y I +G+ + F ID
Sbjct: 2192 LYRVELEENTLTGTDLIQVLATDGDEGTNGQVRYSIVSGDTGNQFRIDSVTGVITVAKPL 2251
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SD P V I +++VND VP Y + EN LP
Sbjct: 2252 DREKKPSYMLSVQSSDRGSSPRTDTTTVNIVLKDVNDYVPTFELSPYNVNVPENLE-TLP 2310
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYF 131
I+Q+ A D D + +++Y + +GN E F
Sbjct: 2311 KVILQVVARDDDQGLNSKLTYVLVSGNEEGAF 2342
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN----IDIGSDLTGG 61
V+Y +++QS ++ A+ G++ Q + Y+ S+G+ N I SD
Sbjct: 2941 VFY--FIKSQSEFF---RINATTGEIFNKQYLRYQNSSGSSNVNINRHSFIVTSSDRGSP 2995
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISY 120
P V I + + NDN P+ L P Y+ + +N ++G I A D D + + Y
Sbjct: 2996 PLLSETTVTINIVDSNDNAPLFLAPKYFTPVTKNVRAGTNLIKVTAVDDKDFGLNSEVEY 3055
Query: 121 KISAGNPESYFNIDIGSG 138
+S + + F +D +G
Sbjct: 3056 FVSDESKTNKFRLDRSTG 3073
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 25/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLTGGPDQVYLI 68
I E+ S I ++A D D + I Y IS+GN F N G+ P L
Sbjct: 3132 IPESHSVGAVIRTVSARDRDAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELC 3191
Query: 69 ----------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
V I V +VNDN P Y+ ++EN +++L
Sbjct: 3192 QKHELIVTATDGGWVSRTGFCSVTINVIDVNDNSPTFSPEDYFPNVLENAPSGTTVIRLN 3251
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P+ I+Y I + + + F ID +G++
Sbjct: 3252 ASDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTI 3284
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y ++ EN ++Q+ A+DGD + ++ Y I +G+
Sbjct: 2174 VVVIVLDINDNNPLFAQKLYRVELEENTLTGTDLIQVLATDGDEGTNGQVRYSIVSGDTG 2233
Query: 129 SYFNIDIGSG 138
+ F ID +G
Sbjct: 2234 NQFRIDSVTG 2243
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------NIDIG 55
PVY I E+ + + + A+D D + I+Y +S + E F N+
Sbjct: 1878 PVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRA 1937
Query: 56 SD--------LT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D LT GG + VY + ++NDN P+ Y ++EN + I
Sbjct: 1938 LDYEAQQYYILTIRAEDGGGQFATIRVYFNILDINDNPPVFSMTSYSTSLMENLAPGSAI 1997
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ + +D D + ++S+ I++G+ +F ID
Sbjct: 1998 LNFSVTDADDGSNSQLSFSIASGDSMGHFGID 2029
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + + V +VNDN P + A+IVEN S ++ +AA D D + ++ Y+
Sbjct: 2682 PFSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSP-RKLLTVAAVDRDSGLNGQLIYE 2740
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2741 IIEGNTENSFSINRATGEI 2759
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L +Y A I E + + +++++ASD D + I Y + GN E F ID + L
Sbjct: 1245 LKDLYQATISELAANLTQVLRVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLV 1304
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I V + NDN P ++EN
Sbjct: 1305 GKLDHEATASYSLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSFPKSTLSVDVLENMRV 1364
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1365 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1406
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 38 SYKISAGNPESYFNIDI-----------------GSDLTGGPD---------------QV 65
SY+I +GN E F ++I G D P +
Sbjct: 158 SYRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVEDKGEPRRRG 217
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
YL V + VQ++NDN P+ +Y A++ E+ ++Q+AA+D D + I Y++
Sbjct: 218 YLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVLQVAAADADEGTNADIRYRL 274
>gi|156311353|ref|XP_001617773.1| hypothetical protein NEMVEDRAFT_v1g48709 [Nematostella vectensis]
gi|156195716|gb|EDO25673.1| predicted protein [Nematostella vectensis]
Length = 347
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF------NIDIGSDLTG 60
Y I E+ + I ++ASD D+ + R++Y I + ++ I +G L
Sbjct: 58 YVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDR 117
Query: 61 GPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ YL+ VYI V +VNDN P VY+ +I E+ + PI
Sbjct: 118 EGVEHYLLNVTATDNGRLNTNDASVDVYINVLDVNDNAPQFEAAVYHGEISESADKLTPI 177
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V + A D D + + Y + +GN F I +G+G++
Sbjct: 178 VTVKAIDKDSGSNGIVKYSLISGNDGDAFTI-LGNGTI 214
>gi|14017841|dbj|BAB47441.1| KIAA1812 protein [Homo sapiens]
Length = 803
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 129 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 188
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 189 YSIVSASAFGSYFDISLYEG 208
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 157 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 216
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 217 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 276
Query: 98 GILPIVQLAASDGDLDPD---QRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + + I Y + + F I+ SG +
Sbjct: 277 AGATVLFLNATDLDRSREYGQESIIYSLEGS---TQFRINARSGEI 319
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 486 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 545
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 546 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 605
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 606 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 636
>gi|444511338|gb|ELV09857.1| Protocadherin-23, partial [Tupaia chinensis]
Length = 2686
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
G + Y V I +Q+VNDN+P Y+A + E Q ++Q+ A+D D + + Y
Sbjct: 1542 GRHRAYSTVAILIQDVNDNLPRFEQSAYHASVPEGQFYNTRVLQVFATDQDSGLNGLVEY 1601
Query: 121 KISAGNPESYFNIDIGSG 138
I +GN E+ F ID SG
Sbjct: 1602 SIVSGNREAAFQIDALSG 1619
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 35/155 (22%)
Query: 21 IVQLAASDGDLDPDQ-RISYKISAGNPESYFNID-------------------------- 53
++ L+ D D P+ + Y I +G+P+S+F ++
Sbjct: 1890 LLTLSTVDHDWTPENTHVEYSIVSGDPQSHFRVEGSVVHAEYPHEQVGYLVLLDKLDREV 1949
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ SD P +V I+V +VND+ P P ++A + E+ P +
Sbjct: 1950 AASHKLVVLASDGGCPPLSSTAVVSIRVLDVNDSPPEFSSPSHHAHVRESTPPGSPTTVV 2009
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+A D D P + Y+I +GN + +F ++ +G L
Sbjct: 2010 SARDRDTGPHAEVFYRIISGNEKGHFLLEEKTGVL 2044
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y+A + E Q ++Q+ A+D D + + Y I +GN E+ F ID S +
Sbjct: 1569 YHASVPEGQFYNTRVLQVFATDQDSGLNGLVEYSIVSGNREAAFQIDALSGVITANAILD 1628
Query: 59 ---------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P +V IQV + ND+ P+ L P +I E+ + + +
Sbjct: 1629 YESVSNYSLIVQATDKGMPRLSATTLVKIQVTDRNDHAPVFL-PSEAVEISESAAIGVVV 1687
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ D DL+P S+ + GNP ++F ID +G +
Sbjct: 1688 TRVSVHDADLNPAFVFSFA-NEGNPGAHFAIDRSTGEV 1724
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTG 60
L +Y A + ENQ+ + ++ A D D + ++ ++I G+ +F I D G +T
Sbjct: 1043 LQTLYEASVKENQNPGQFVTRVEAMDRDSGINSKLRFEILPGSSFGFFEINSDTGEVVTA 1102
Query: 61 GP------DQVYLIVYIQ----------------VQNVNDNVPMTLDPVYYAQIVENQSG 98
+ L V ++ V + ND+VP+ + P + +++ENQ
Sbjct: 1103 ATLDREAQEAFTLRVLVRDGGVPSLSSTATILCTVDDENDHVPVFVVPRHDLEVLENQEP 1162
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L LA D D + I Y+I GN YF ID SG+L
Sbjct: 1163 ELVYTALAF-DRDAGNNGAIRYRILDGNTGEYFAIDATSGAL 1203
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------- 58
A + E+ + + + A D D + +++Y I +GN + F +D S L
Sbjct: 944 AHVREDVTAGALVHHITAQDPDEGRNGQVTYSILSGNEDRAFTLDASSGLLTTARALDYE 1003
Query: 59 -------------TGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+G P + + + V +VND P+ L +Y A + ENQ+ + +
Sbjct: 1004 VQAQHVLTVLARDSGSPARSSSQTLTVTVLDVNDEAPVFLQTLYEASVKENQNPGQFVTR 1063
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + ++ ++I G+ +F I+ +G +
Sbjct: 1064 VEAMDRDSGINSKLRFEILPGSSFGFFEINSDTGEV 1099
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ-RISYKI 122
+ ++V I++Q+VND+ P Y + E+ ++ L+ D D P+ + Y I
Sbjct: 1852 RAVMLVEIEIQDVNDHAPEFTATSYDLSVSEDTPIGRTLLTLSTVDHDWTPENTHVEYSI 1911
Query: 123 SAGNPESYFNID 134
+G+P+S+F ++
Sbjct: 1912 VSGDPQSHFRVE 1923
>gi|18676668|dbj|BAB84986.1| FLJ00233 protein [Homo sapiens]
Length = 535
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 21 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 80
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 81 YSIVSASAFGSYFDISLYEG 100
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 49 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 108
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 109 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 168
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 169 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 211
>gi|119574815|gb|EAW54430.1| cadherin-like 23, isoform CRA_d [Homo sapiens]
Length = 843
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 154 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 213
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 214 YSIVSASAFGSYFDISLYEG 233
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 182 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 241
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 242 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 301
Query: 98 GILPIVQLAASDGDLDPD---QRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + + I Y + + F I+ SG +
Sbjct: 302 AGATVLFLNATDLDRSREYGQESIIYSLEGS---TQFRINARSGEI 344
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 511 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 570
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 571 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 630
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 631 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 661
>gi|449671473|ref|XP_002161598.2| PREDICTED: protocadherin Fat 3-like [Hydra magnipapillata]
Length = 741
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGS---- 56
++ +Y A I EN++ + + L+A D D D + +I+Y I A N + F I +
Sbjct: 483 VNALYTASIRENEASGVFLAHLSAHDLDKDDNAKITYSIFPDAENTSACFQIGLTDGRLT 542
Query: 57 -----DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +LI V I V + NDN+P+ Y I
Sbjct: 543 TKCSLDYEEKTSHSFLIQASDNPKSGEKKFSTTKVKINVLDENDNIPIFKQLHLYKNIRY 602
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ P+V++ A+D D ISY++ +GN F+ID +G +
Sbjct: 603 DEEINAPVVKVEATDKDTGSYGDISYRVLSGNDLQRFHIDQKTGQI 648
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD +++ Y ++ F D +D+T V+++ND+ P+ ++ +Y
Sbjct: 439 GELDREKKDIYNFKVLAQQASFQPDAYADVTA-----------IVEDINDHAPVFVNALY 487
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
A I EN++ + + L+A D D D + +I+Y I A N + F I + G L
Sbjct: 488 TASIRENEASGVFLAHLSAHDLDKDDNAKITYSIFPDAENTSACFQIGLTDGRL 541
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2232 YSVNVPENL-GTLPRTILQVVARDDDQGPNSKLSYVLFGGNEDNAFTLSASGELQVTQSL 2290
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP +Y+ I E+
Sbjct: 2291 DRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKMYFTTIPEDAPTGTD 2350
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY+I GN S F I+ +G +
Sbjct: 2351 VLLVNASDADASTNAVISYRIIGGN--SQFTINPSTGQI 2387
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2126 LYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPL 2185
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VPM Y + EN G LP
Sbjct: 2186 DREKTPTYSLTVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPYSVNVPENL-GTLP 2244
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2245 RTILQVVARDDDQGPNSKLSYVLFGGNEDNAFTLS-ASGEL 2284
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A + F +D
Sbjct: 588 YDVSVVENAPTGTELLVLRATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVTSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ + +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2108 VVVMVLDINDNNPVFVQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIVDGNAN 2167
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2168 QEFRIDSVTGAI 2179
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNAN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 31/131 (23%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGG---------------------------PDQVYLIV 69
+SY I++GN S F ID LTG P Y +
Sbjct: 2569 LSYYIASGNLGSTFQID---QLTGQVSISQPLDFEKIQKYVIWIEARDGGFPPLSSYEKL 2625
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+ V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+I GN E
Sbjct: 2626 DLTVLDVNDNSPVFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNKEH 2684
Query: 130 YFNIDIGSGSL 140
F I+ +G +
Sbjct: 2685 SFTINHATGEI 2695
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3169 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3227
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3228 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3287
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3288 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3325
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A I E+ S + ++A D D + I Y IS+GN E F I+ + +
Sbjct: 3066 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYE 3125
Query: 60 -------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG Y V + V +VNDN P+ Y+ ++EN ++
Sbjct: 3126 LCQKHEMTITATDGGWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIH 3185
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3186 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3218
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y+ I E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 2336 MYFTTIPEDAPTGTDVLLVNASDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDR 2395
Query: 60 ---------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P+ + V + V +VNDN P Y I +
Sbjct: 2396 ETKENYTLVVVSSDAGSPEPLSSSASVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFV 2455
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +D D+ P+ + Y +S N E F+ID G++
Sbjct: 2456 FAVTVTDADIGPNSELHYSLSGRNSEK-FHIDPLRGAI 2492
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
>gi|341913678|ref|XP_003403671.1| PREDICTED: cadherin-23-like isoform 1 [Homo sapiens]
gi|341913680|ref|XP_003403672.1| PREDICTED: cadherin-23-like isoform 2 [Homo sapiens]
Length = 3354
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMAFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E +
Sbjct: 1593 DRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMG 1690
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVQKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1906
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMAFRMDRISGEIA 1586
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2077 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREE 2136
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P IV I + ++ND+ P L+P+ ++E+ I +
Sbjct: 2137 QESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANI 2196
Query: 106 AASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 2197 TAIDHDLNP--KLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240
>gi|12060937|gb|AAG48303.1|AF312024_1 cadherin related 23 [Homo sapiens]
gi|18077851|gb|AAG27034.2| cadherin 23 [Homo sapiens]
Length = 3354
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMTFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E +
Sbjct: 1593 DRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMG 1690
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1906
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMTFRMDRISGEIA 1586
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2077 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREE 2136
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P IV I + ++ND+ P L+P+ ++E+ I +
Sbjct: 2137 QESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANI 2196
Query: 106 AASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 2197 TAIDHDLNP--KLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240
>gi|334311099|ref|XP_001377956.2| PREDICTED: protocadherin gamma-B5 [Monodelphis domestica]
Length = 934
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P + + + +VNDN P+ L P
Sbjct: 406 TDGPLDREQIPEYNITV----------TATDKGNPPLSTSKTLTLNIADVNDNHPVFLQP 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-----PESYFNIDIGSGSL 140
Y + EN I +++ASD DL+ + R+SY I + + SY +++ SG +
Sbjct: 456 SYVVYVPENNPSAASIARVSASDSDLEGNGRVSYSIVSSDLAPLPLSSYVSVNGHSGDI 514
>gi|189571674|ref|NP_071407.4| cadherin-23 isoform 1 precursor [Homo sapiens]
gi|408359994|sp|Q9H251.2|CAD23_HUMAN RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
Length = 3354
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMAFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E +
Sbjct: 1593 DRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMG 1690
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1906
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMAFRMDRISGEIA 1586
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2077 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREE 2136
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P IV I + ++ND+ P L+P+ ++E+ I +
Sbjct: 2137 QESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANI 2196
Query: 106 AASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 2197 TAIDHDLNP--KLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y ++ EN ++Q+ A+DGD + ++ Y I +G+ S F ID
Sbjct: 2204 LYKVEVAENTLTGTDLIQVLAADGDEGTNGQVRYAIVSGDANSEFRIDSVTGVITVAKPL 2263
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SD P V I +++VND +P Y + EN LP
Sbjct: 2264 DREKKPSYTLTVQSSDRGSSPRTDTTTVSIVLKDVNDFIPTFELSPYSVNVPENLE-TLP 2322
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + +++Y + AGN E F + GSG L
Sbjct: 2323 KVILQVVARDDDQGLNSKLTYMLVAGNEEGAFTLS-GSGEL 2362
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 36/160 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y + EN ++ L+A+DGDL + + + + P
Sbjct: 623 YQVSLAENSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDP 682
Query: 47 ---------------ESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+S+F++ + +DL P V + + +VNDN P+ Y+A
Sbjct: 683 VSGKLSTISQLDREEQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNSPVFYPVQYFA 742
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I EN+ + L+A+D DL P+ + Y ISAG+ +
Sbjct: 743 HIQENEPAGTYVTTLSATDPDLGPNGTVKYSISAGDTSRF 782
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
I+Q+ A D D + +++Y + AGN E F + +L
Sbjct: 2325 ILQVVARDDDQGLNSKLTYMLVAGNEEGAFTLSGSGELRLVQSLDREAKEQYLLLVTAAD 2384
Query: 59 TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
TG P + + V +VNDNVP +Y+A + E+ I+ + +SD D +
Sbjct: 2385 TGSPALTGTGTIAVTVDDVNDNVPTFAFNMYFATVPEDAPTGTDILLVNSSDADASTNAV 2444
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
ISY++ GN S F I+ +G +
Sbjct: 2445 ISYRLMGGN--SQFTINPSTGQI 2465
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + +Y++ ++NDN P L +Y A I E + + +++++ASD D + I Y +
Sbjct: 1238 DQATVQIYMK--DINDNAPKFLKDLYQATISELAANLTQVLRVSASDVDEGVNGLIQYSV 1295
Query: 123 SAGNPESYFNIDIGSGSL 140
GN E+ F ID +G +
Sbjct: 1296 IKGNEENQFVIDTSTGQV 1313
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G+ T G
Sbjct: 3247 YFPTVLENAPSGTTVICLNATDADSGSNAVIAYAIQSSDSD-LFVIDPNTGTITTQGFLD 3305
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3306 YETKQSYHLTVKAFNVPDEERCSFATVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVV 3365
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F ID SG +
Sbjct: 3366 GEVFASDRDMGIDGEVHYLIFGNSRKKGFQIDEKSGQI 3403
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2115 VFKAQATDPDSGPNSYIEYSLLPPPGNKFSIGTIDGEVRLTGELDREAVANYTLTVVATD 2174
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y ++ EN ++Q+ A+DGD + +
Sbjct: 2175 KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVAENTLTGTDLIQVLAADGDEGTNGQ 2234
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y I +G+ S F ID +G
Sbjct: 2235 VRYAIVSGDANSEFRIDSVTG 2255
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 62 PDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P Y + I V +VNDNVP DP + A+I EN S I+ +AA D D + +++Y
Sbjct: 2696 PFSSYKKLEISVIDVNDNVPEFERDP-FIAEIAENLSP-RKILTVAAVDRDSGLNGQLNY 2753
Query: 121 KISAGNPESYFNIDIGSGSL 140
+I GN E+ F+I+ +G +
Sbjct: 2754 EIIEGNTENSFSINRATGEI 2773
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN----IDIGSDLTGG 61
V+Y +++QS ++ A+ G++ Q + Y+ S+G+ N I SD
Sbjct: 2955 VFY--FIKSQSEFF---RINATTGEIFNKQYLRYQNSSGSSNVNINRHSFIVTSSDRGSP 3009
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISY 120
P V I V + NDN P+ L P Y+ + +N + G I A D D + + Y
Sbjct: 3010 PLVSETTVTINVVDSNDNAPLFLTPKYFTPVTKNVRVGTNLIKVTAVDDKDFGLNSEVEY 3069
Query: 121 KISAGNPESYFNIDIGSG 138
I+ + + F +D +G
Sbjct: 3070 FIADESKTNKFRLDRNTG 3087
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---------YFNIDIG 55
PVY I E+ + + + A+D D + I+Y IS + E FN+
Sbjct: 1890 PVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTISEDDEEGIFFLNPVTGVFNLTRA 1949
Query: 56 SD--------LT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D LT GG + VY + +VNDN P+ ++EN I
Sbjct: 1950 LDYEAQQYYILTVRAEDGGGQFTAIRVYFNILDVNDNPPVFGMASCSTSLMENLPPGSAI 2009
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ +D D P+ ++S+ I++G+ F ID
Sbjct: 2010 LNFTVTDADDGPNSQLSFSIASGDSAGQFGID 2041
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 32/117 (27%)
Query: 38 SYKISAGNPESYFNIDI-------GSDL----TGGPDQV--------------------- 65
SY+I AGN E F ++I G+ L GG D+
Sbjct: 169 SYRIVAGNEEGRFRLNITLNPSGEGAFLHLVSRGGLDREATPTYQLLVQVEDKGEPRRRG 228
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
YL V + +Q++NDN P+ +Y A++ E+ ++Q+ A+D D + I Y++
Sbjct: 229 YLQVNVTIQDINDNPPIFSQTLYQARVPEDAPVGASVLQVTAADADEGTNADIRYRL 285
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L +Y A I E + + +++++ASD D + I Y + GN E+ F ID + L
Sbjct: 1257 LKDLYQATISELAANLTQVLRVSASDVDEGVNGLIQYSVIKGNEENQFVIDTSTGQVTLV 1316
Query: 60 GGPD---------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D ++ I V + NDN P ++EN
Sbjct: 1317 GRLDYEATASYSLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENMRV 1376
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1377 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1418
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLTGGP-----DQV-------- 65
+ ++A D D + I Y IS+GN F N G+ P DQ
Sbjct: 3156 VRTVSARDRDAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELDQKHELVVTAT 3215
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Y V + V +VNDN P Y+ ++EN ++ L A+D D +
Sbjct: 3216 DGGWVSRTGYCSVTVNVIDVNDNSPAFSPEEYFPTVLENAPSGTTVICLNATDADSGSNA 3275
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
I+Y I + + + F ID +G++
Sbjct: 3276 VIAYAIQSSDSD-LFVIDPNTGTI 3298
>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
domestica]
Length = 4351
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS-DLTGGP 62
VY A + E P++QL ASD D ++ +SY I + E S+F ID S +++
Sbjct: 2271 VYSALVSEGLPPQTPVIQLLASDQDSGRNKDVSYWILEDDSEDSSFFQIDESSGEMSTTQ 2330
Query: 63 D-------QVYL----------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ Q Y+ +V + V +VNDN P P Y A + E +
Sbjct: 2331 ELDYETQQQFYVKVRAVDNGVPPLSAETLVIVNVSDVNDNPPAFRQPQYEANVSELATCG 2390
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 2391 QLVIKVQALDPDSGDTTRLEYLILSGNEDRHFTINSTSG 2429
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
PVYY + E+ ++QL A D D ++++ I++GN +F I+ + L
Sbjct: 1136 PVYYPSVKEDAPMNTSVLQLDAWDPDPVSQGKLTFHITSGNNLGFFVINSLTGLLSTARQ 1195
Query: 59 -----------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P Q V ++V +VNDN P + ++ E Q +
Sbjct: 1196 LDRENKAEHILEVAVQDNGKPSLQSTSRVVVRVLDVNDNSPTFSHKRFKIRLPERQDSSV 1255
Query: 101 P--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P + +L ASD D P+ ++SY I N E F ID +G
Sbjct: 1256 PRPVYRLVASDRDEGPNGKVSYSIEE-NYEEAFTIDAETG 1294
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D D D I Y + G F+ID
Sbjct: 1032 VYQGQVEENSLPGTLVMSVTAQDADFGQDGVIQYFLRDGTDLDTFSIDRDTGMIQTMMPL 1091
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P PVYY + E+
Sbjct: 1092 DREFSPHYWLTVLAVDQGSVPLSSVTEVYIEVMDTNDNPPQMSRPVYYPSVKEDAPMNTS 1151
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I+ +G L
Sbjct: 1152 VLQLDAWDPDPVSQGKLTFHITSGNNLGFFVINSLTGLL 1190
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +QV+++NDN P+ VY A + E P++QL ASD D ++ +SY I + E
Sbjct: 2253 VEVQVEDINDNPPVFSQLVYSALVSEGLPPQTPVIQLLASDQDSGRNKDVSYWILEDDSE 2312
Query: 129 --SYFNIDIGSGSL 140
S+F ID SG +
Sbjct: 2313 DSSFFQIDESSGEM 2326
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 26/141 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT-----------------------G 60
LAASD D + ++ Y ++ GN ES FN+++ + L G
Sbjct: 733 LAASDLDTGFNGKLVYVLAGGNEESRFNVELETGLLKVAAPLDHETTSFYILNVTVYDLG 792
Query: 61 GPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
P + + + + V + NDN P Y +I E+ I Q+ A D D D + R+
Sbjct: 793 TPQKSTWKHLAVNVGDENDNTPRFPPGGYQVEIREDIEVGTTIAQMKAEDADSDDNGRVC 852
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + + P F++ +G +
Sbjct: 853 YTLLS--PTDKFSVHALTGEV 871
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQ---LAASDGDLDPDQRISYKISAGNPESYFNIDIGSD 57
++ V Y N+ G+ I L ++ +LD ++ SY++ GS+
Sbjct: 1680 LSTSEVTYEMREGNKDGVFSINSYSGLISTQKNLDHEKVSSYQLKVR----------GSN 1729
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGIL-----PIVQLAASD 109
+ G V ++VYI + NDN P+ ++ + QI E S IL P+V + A+D
Sbjct: 1730 MAGAFADVMVLVYII--DENDNAPVFINSSFVGQISEAAPIHSMILGEYHHPLV-VRATD 1786
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + + Y+I +F ID G+L
Sbjct: 1787 ADTDANALLVYEILEREALKFFKIDPSMGTL 1817
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F I+ S +
Sbjct: 2377 PQYEANVSELATCGQLVIKVQALDPDSGDTTRLEYLILSGNEDRHFTINSTSGIISMFNF 2436
Query: 59 -TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
D YL+ VYI N N P +Y ++ EN ++
Sbjct: 2437 CRKHLDSAYLLRVAASDGVFRTAVPVYINTTNANKYSPEFRQHIYEVELAENAEIGTKVI 2496
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
+L A D D P I Y I F+I+
Sbjct: 2497 ELLAVDPDDGPYGTIDYTIINKLASEKFSIN 2527
>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3253
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IG 55
Y AQI EN+ ++ ++ASD D P+ +++Y G E FNI+ +
Sbjct: 1643 YEAQISENRPSGTEVLTVSASDLDQGPNGQVTY---GGIAEKDFNINPVTGVITTTKSLD 1699
Query: 56 SDLT-----------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+L GG P+ V I+V + NDN P+ Y ++ EN +P+
Sbjct: 1700 RELQEYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNAPVFGRLYYNIEVPENLDA-MPL 1758
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D I+YKISAG+ F++D SG L
Sbjct: 1759 FTLRANDQDTGESAIINYKISAGDLAGDFHLDRMSGVL 1796
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 27/152 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----------------------E 47
++E+Q + + A+D D + R++Y+I +GN +
Sbjct: 1542 VMEDQPVGFVTLYVMATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSIFKPLDREDQ 1601
Query: 48 SYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FN+ I ++ G P + ++ + V +VND VP + Y AQI EN+ ++ ++
Sbjct: 1602 DIFNLTIIAEDHGIPQRSSTQLLCVHVIDVNDEVPWFEETQYEAQISENRPSGTEVLTVS 1661
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D P+ +++Y G E FNI+ +G
Sbjct: 1662 ASDLDQGPNGQVTY---GGIAEKDFNINPVTG 1690
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y+ V + +Q+VNDN+P Y A I E Q PI+Q+AA D D + ++ Y + +
Sbjct: 2118 YMAVNLILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSLRSS 2177
Query: 126 NPESYFNIDIGSGSL 140
+ F ID +GS+
Sbjct: 2178 SMSGLFKIDPLTGSI 2192
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+++ I V + NDN P Y + E + I+ L+A+D D P+ + Y I +G+
Sbjct: 2546 VLILISVLDTNDNPPAFSRAEYSVVLSEGVAAGTEILHLSATDPDSTPNGEVQYSICSGD 2605
Query: 127 PESYFNIDIGSGSL 140
F +D +G+L
Sbjct: 2606 ETELFQVDRWTGAL 2619
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 30/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG----NPESY------------ 49
VY I EN + I+++ A D D ISY +S+G +P +
Sbjct: 580 VYNVSIKENTAPGTCILEVTARDADGGSFGSISYSLSSGIKSASPSQFTIGKETGQICTT 639
Query: 50 -----------FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
F+ + + GG V V + V ++NDN P T PV YA + QS
Sbjct: 640 AVLDRDHGPASFDFTVTAVDGGGLSSVAY-VKVDVVDINDNRP-TFYPVNYAVSLSTQSA 697
Query: 99 I-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V++ A D D + RI+YK + G YF ++ +G
Sbjct: 698 PGTSVVRVMAYDPDSGENGRITYKTAPGGASPYFTLNKDTG 738
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 2 TLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFN-------ID 53
T PV YA + QS +V++ A D D + RI+YK + G YF I
Sbjct: 682 TFYPVNYAVSLSTQSAPGTSVVRVMAYDPDSGENGRITYKTAPGGASPYFTLNKDTGVIS 741
Query: 54 IGSDLTGGPDQVYLIV--------YIQVQNVNDNV---------PMTLDPVYYAQIVEN- 95
+ + G + V +V + + N N+ P+ YY I E+
Sbjct: 742 LSRSVFGKANSVIPMVISAQDGGGLVSLTNARVNISVVAGLVAPPVFEHAHYYFSIAEDV 801
Query: 96 -QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ I+Q + D + ISY IS+G+P Y +D +G+L
Sbjct: 802 LRGTVVGIIQASVK---TDSSRDISYTISSGDPVGYITVDPDTGAL 844
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYY 89
LD ++R +Y +S E++ G P + + + + VQ++NDN P+ Y+
Sbjct: 210 LDREKRSTYTLSL---EAFDG--------GSPKRTDEMTLDVTVQDINDNAPVFNQSRYH 258
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSG 138
A I EN I+Q+ A+D D + ++ Y+I+ +P+ YF +D SG
Sbjct: 259 AIISENLQPGSNILQVFATDDDEGDNGKVLYEINRRQSDPDHYFLVDPQSG 309
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 26/131 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNID------------------------I 54
++Q+ A D D P+ I+Y + G +F+ID +
Sbjct: 488 VLQVTARDKDHGPNGDIAYSLFQDQGAYNKWFSIDSVTGIITTHSQLDYEKNPNPSITVV 547
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+D P +V I +Q++NDN P+ VY I EN + I+++ A D D
Sbjct: 548 ATDGGKPPLSSTAVVNIVLQDINDNEPVFERNVYNVSIKENTAPGTCILEVTARDADGGS 607
Query: 115 DQRISYKISAG 125
ISY +S+G
Sbjct: 608 FGSISYSLSSG 618
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
I+ L D LD ++R +Y++ + +D P + IQV +VNDN
Sbjct: 417 IIYLICVDRILDREERDTYELRV----------MATDSGTPPLRAESSFIIQVTDVNDNP 466
Query: 81 PMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDI 135
P+ PVY I E + P ++Q+ A D D P+ I+Y + G +F+ID
Sbjct: 467 PLFDQPVYRQVIPEV---VFPGSFVLQVTARDKDHGPNGDIAYSLFQDQGAYNKWFSIDS 523
Query: 136 GSG 138
+G
Sbjct: 524 VTG 526
>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
Length = 4342
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ A ++E+ ++ L A D DL D + Y I G+ F +D
Sbjct: 1036 VHTAAVMEDAKIGTSVLTLTAVDNDLGRDGVVRYYIHDGSGLGVFTVDEETGVIQTAGLL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DL P + VYI+V ++NDN P PVY+ + EN
Sbjct: 1096 DREVVPHYWLTVYAKDLGTIPLVSWTEVYIEVWDINDNPPELSQPVYFGSVQENLPKDKS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+++++A+D D + +++++I + YF ID +G
Sbjct: 1156 VLKVSATDMDKSSEGKLAFQI-LDSQRIYFTIDSKTG 1191
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 38 SYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ +++AG +S++N+ + +T G + YIQV ++N++ PM L +Y ++ E+ S
Sbjct: 1404 ARRLNAGK-KSHYNLTVR--VTDGFQTITTQAYIQVVDINEHRPMFLKSLYEVRVPEDTS 1460
Query: 98 GILPIVQLAASDGDLDPDQRISYKI-SAGNPES--YFNIDIGSGSL 140
I+ ++A D D + Y I S+ NPES YF++D SG L
Sbjct: 1461 PWKEILHISAHDA--DASSGLFYSIHSSLNPESLKYFHLDQRSGVL 1504
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDLT-- 59
+ +Y I+EN IV L +D D+ + R I I+ G+P F++ +G + T
Sbjct: 2901 EELYQGSILENSRPGENIVTLTTADKDVSAENRQIVCYITDGDPLGQFSVTAVGEEWTVI 2960
Query: 60 --------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V + V ++NDN P Y ++EN S
Sbjct: 2961 SKSPLDREDKDKYTLKIIATDGRFQTSANVEVHVLDLNDNSPFCEQLQYTEAVMENSSSG 3020
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++ASD D+ + ++S+ + N + F++D +G L
Sbjct: 3021 KVILKISASDPDIGTNGQVSFTLHGPNADK-FHLDPKTGEL 3060
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+VQ+VNDN PM Y A + EN ++Q+ A+D D + + +SY + PE
Sbjct: 2777 VHIEVQDVNDNKPMFEADTYKAFLAENLPSGTTVIQVTANDADANINGEVSYTLE---PE 2833
Query: 129 S-----YFNIDIGSG 138
S F ID +G
Sbjct: 2834 SDDIGDMFAIDSQTG 2848
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPES--YFNIDIGSD 57
M L +Y ++ E+ S I+ ++A D D + Y I S+ NPES YF++D S
Sbjct: 1445 MFLKSLYEVRVPEDTSPWKEILHISAHDAD--ASSGLFYSIHSSLNPESLKYFHLDQRSG 1502
Query: 58 LTGGPDQV------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
+ +++ + V + V++ ND++P LD +Y I+
Sbjct: 1503 VLVLKEELDYETISTHTLIVMVRDDKIPIKKNFAKVVVHVEDCNDHIPSFLD-THYEGII 1561
Query: 94 ENQSGI-LPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
N + ++++ A D D + I Y S GN + F ID G+GS+
Sbjct: 1562 SNLALTGTEVLRVKALDKDTGSNADIVYSFHSGGNVDGAFKIDQGTGSI 1610
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
PVY+ + EN +++++A+D D + +++++I + YF ID
Sbjct: 1140 PVYFGSVQENLPKDKSVLKVSATDMDKSSEGKLAFQI-LDSQRIYFTIDSKTGVISTLSS 1198
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ SD P V I+V + NDN P ++ ++ E QS
Sbjct: 1199 LDREQKAEHIIEVMVSDKGEPPLSSTATVVIEVLDENDNSPQFSHKLFQIKLPERQSTAE 1258
Query: 101 P--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P I ++ A D D+ P+ I+Y + N E F+I +G
Sbjct: 1259 PQDIYRMVARDDDVGPNGMITYSLEDNN-EGRFDIHPDTG 1297
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------ 46
P Y A + EN ++ ++A D D D + ++Y I+ P
Sbjct: 463 PSYQASLPENVRIGTSVLSVSAIDVDKDNNGFVTYAIANTGPVPFSIDPLTGVISTSQEF 522
Query: 47 -----ESYFNIDIGSDLTGGP-DQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ ++++ I + +G P ++V V I + NVNDNVP+ A I + +
Sbjct: 523 DYELMKRWYHLRIWASDSGNPFNRVSECTVTITMTNVNDNVPVFERVACNASIPRDFAVG 582
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I +++A D LD Q+I Y+I +GN + F+ID SG
Sbjct: 583 EIIAEISALD--LDELQQIVYRIESGNDDGLFSIDPVSG 619
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT----- 59
Y ++EN S I++++ASD D+ + ++S+ + N + F++D G T
Sbjct: 3009 YTEAVMENSSSGKVILKISASDPDIGTNGQVSFTLHGPNADK-FHLDPKTGELFTLAVLD 3067
Query: 60 ---------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG V + VQ++NDN P Y + +N + PI
Sbjct: 3068 REREKEYDLVVKATDGGGRSCQADVTLMVQDMNDNPPQFSTSHYEVTVFDNTTIRTPIAV 3127
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + + Y + G +F++D SG L
Sbjct: 3128 IYAKDPDTGINSEVRYSLQ-GADSGFFSLDEISGVL 3162
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 31/133 (23%)
Query: 39 YKISAGNPESYFNIDIGSDLTGGPDQVYL----------------------IVYIQVQNV 76
Y+I+ G+P F+I+I S L + + +V++ V +
Sbjct: 1690 YRINEGDPNGTFHININSGLLSVKNALDFEQHSSYHLQISATNTAGISSDAVVFVYVIDA 1749
Query: 77 NDNVPMTLDPVYYAQIVENQ--------SGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
NDN P+ VYY QI E+ P+V + ASD D D + + Y+I
Sbjct: 1750 NDNAPVFHQDVYYGQISESAPVNSMVTGENNTPLV-IKASDADKDTNALLVYQILEPAAH 1808
Query: 129 SYFNIDIGSGSLG 141
F ID G++
Sbjct: 1809 EVFKIDPSMGTIS 1821
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 4 DPVYYAQIVENQSG---ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+PV Y+ I N+ G I P+ L + LD ++ Y +S E + SD+
Sbjct: 3244 EPVRYSIISGNEDGRFMINPVTGLLSVKAALDFERCREYYLSV---EGARGKPLLSDIA- 3299
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
+V I + +VNDN P+ Y I E+ S +Q+ A D D P+ I Y
Sbjct: 3300 -------MVIINITDVNDNPPVFNRSSYSTVIPEDISPGEMALQVRAIDLDGPPNNFIIY 3352
Query: 121 KISAGNPESYFNIDIGSG 138
I +G+P+ F+ID +G
Sbjct: 3353 SIVSGDPKQQFSIDPRTG 3370
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V +VNDN P +P Y A + E + ++++ ASD D D + YKI +GN
Sbjct: 2360 IIVNVIDVNDNPPDFSEPSYRASLDEMATCGNIVIKVQASDPDSKDD--LQYKILSGNEG 2417
Query: 129 SYFNIDIGSG 138
YF I+ SG
Sbjct: 2418 RYFAINESSG 2427
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
++Q A+D D + ++ Y IS+GN + F ID+ +
Sbjct: 734 VLQFNATDNDSGFNGKLVYSISSGNEDGCFTIDVNAGDLKVICALDREQKEFYILNITVY 793
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + + + NDN P+ Y I EN I ++ A D DLD +
Sbjct: 794 DLGYPQTSTWKLLAVNILDANDNPPLFSQSRYVVTIPENTEVDKSIFKVNAVDFDLDNNG 853
Query: 117 RISYKI 122
Y +
Sbjct: 854 AFKYSL 859
>gi|431892548|gb|ELK02981.1| Protocadherin gamma-B3 [Pteropus alecto]
Length = 838
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P V V +VNDN P+
Sbjct: 391 TDGALDREQTPEYNITI----------TATDRGKPPLSSKRSVTFNVADVNDNAPVFFQA 440
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY ++ SG
Sbjct: 441 SYMVPVAENNPPGASIAQVSASDPDLGPNGHVSYSIVASDLEPRALSSYVSVSAQSG 497
>gi|119574813|gb|EAW54428.1| cadherin-like 23, isoform CRA_b [Homo sapiens]
Length = 677
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 154 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 213
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 214 YSIVSASAFGSYFDISLYEG 233
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 182 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 241
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 242 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 301
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 302 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 344
>gi|229442257|gb|AAI72771.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1094
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-------- 54
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I F+ID
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTDT--DTFSIDSVTGVVNIA 880
Query: 55 ----------------GSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 881 RPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDL 940
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 941 PEGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
>gi|284925130|ref|NP_001165402.1| cadherin-23 isoform 4 precursor [Homo sapiens]
gi|21619654|gb|AAH32581.1| CDH23 protein [Homo sapiens]
gi|325463513|gb|ADZ15527.1| cadherin-like 23 [synthetic construct]
Length = 1061
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
>gi|395817792|ref|XP_003782336.1| PREDICTED: protocadherin gamma-B6 [Otolemur garnettii]
Length = 739
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 21/120 (17%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---DQVYLIVYIQVQNVNDNVPMT 83
+DG LD +Q NPE +NI I + G P + + +YI +VNDN P+
Sbjct: 328 TDGVLDREQ---------NPE--YNITITAMDRGKPPLSSSISITLYIT--DVNDNAPIF 374
Query: 84 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
L Y + EN + I Q++ASD DL P+ ISY I A + E SY ++ SG
Sbjct: 375 LQASYLIHVAENNPPGVSIAQVSASDPDLGPNGHISYSIVASDLEPTMLSSYVSVSAQSG 434
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A + F +D
Sbjct: 588 YDVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAETVQKSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL P+ + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL P+ + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIVGGNVN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGTI 2211
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2158 LYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIVGGNVNQEFRIDSVTGTITVAKPL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DREKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + +ISY + GN ++ F + SG L
Sbjct: 2277 STILQVLARDDDQGSNSQISYVLFGGNEDNAFTLS-ASGEL 2316
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSP-QKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNQENSFSINHATGEI 2725
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y IS N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSISGTNNHGTFSISPNTGSI 1372
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------F 50
Y+ ++EN ++ L A+D D + I+Y + + + + + F
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGIITTQGFLDF 3258
Query: 51 NIDIGSDLT----GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
LT PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3259 ETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVG 3318
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3319 EVFASDRDLGTDGEVHYLIFGSSRKKGFQINKKTGQI 3355
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREATPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPIFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y V + V +VNDN P+ Y+ ++EN ++ L A+D D + I+Y + +
Sbjct: 3177 YCTVTVNVIDVNDNSPVFTPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSS 3236
Query: 126 NPESYFNIDIGSG 138
+ + F ID +G
Sbjct: 3237 DSD-LFVIDPNTG 3248
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + +ISY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPSTILQVLARDDDQGSNSQISYVLFGGNEDNAFTLSASGELRVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + I V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKEHFVLTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGQLTTASVVDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN I Q A D D + + Y +
Sbjct: 874 TGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFAINEKNGNI 949
>gi|156405044|ref|XP_001640542.1| predicted protein [Nematostella vectensis]
gi|156227677|gb|EDO48479.1| predicted protein [Nematostella vectensis]
Length = 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 46 PESYFNIDIGS-DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
E +FN+ + + D G ++ ++V++ ++NDN P VYY I E ++ V
Sbjct: 35 TEDFFNLTVTAMDEGGRTGELTILVFLL--DMNDNRPRFTQSVYYVNITETTGHVMAGV- 91
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+A+D DL + ISY+I GN + FNID + ++
Sbjct: 92 -SATDQDLGSNAVISYRILGGNIDDVFNIDNATAAV 126
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
VYY I E ++ V +A+D DL + ISY+I GN + FNID
Sbjct: 75 VYYVNITETTGHVMAGV--SATDQDLGSNAVISYRILGGNIDDVFNID 120
>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
Length = 4347
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + G + F+I D G T P
Sbjct: 1032 VHQGQVQENSPSGTSVMVVAAHDDDTGLDGELQYFLRGGTGLAAFSINQDTGMIQTLAPL 1091
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y + VYI+V +VNDN P PV+Y + E+
Sbjct: 1092 DREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPTVREDAPLHTS 1151
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++QL A D D ++++ I++GN +F + +G L
Sbjct: 1152 VLQLDAWDLDSSSKGKLTFNITSGNHMGFFVLHPLTGLLA 1191
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2272 VYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2331
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2332 ELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2391
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2392 HLVLKVQALDPDSRDTSRLEYLILSGNQDRHF 2423
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D ++SY++ G N F ID +
Sbjct: 2798 DP-YKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVGPGSNIHELFAIDSETGWIT 2856
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L +Q+Y ++V + + + NDN P Y +VEN
Sbjct: 2857 TLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSITDENDNAPRFASEDYRGSVVEN 2916
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
P+ L D D+ + +++++ I+ G+P F I
Sbjct: 2917 SEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGI 2955
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--- 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++ G
Sbjct: 2781 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVGPGS 2840
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2841 NIHELFAIDSETG 2853
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2170 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2286
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2287 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2327
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ + +++++ I+ G+P F I +G +
Sbjct: 2909 YRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2968
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V I V ++NDN P +Y ++ E+ I
Sbjct: 2969 TLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCSQLLYTGKVSEDVPPEHFI 3028
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3029 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGDL 3065
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------- 50
P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2378 PQYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINSSSGIISMYNL 2437
Query: 51 ---NIDIGSDL-TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++D +L G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2438 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHIYEAELAENAKVGTKVI 2497
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2498 ELLAIDKDSGPYGTVDYTI 2516
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
I+E+ P+ L A+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 720 ILESAPLNTPLAHLEATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEAT 779
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ NDN P Y I E+ + +L
Sbjct: 780 SFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISEDTEVGTTVAELK 839
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R+ Y + + P F++ +G +
Sbjct: 840 AKDVDSEDNGRVRYVLLS--PTEKFSLHPLTGEM 871
>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2413
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VYIQ ++NDN P VY A + E+ + +++++ASD D + + + Y +
Sbjct: 1168 DQAKVQVYIQ--DINDNQPKFTKDVYQASVSESAPNVTQLLRVSASDVDENKNGLVQYHV 1225
Query: 123 SAGNPESYFNIDIGSGSL 140
+ GN E F ID SG +
Sbjct: 1226 AEGNEEGQFMIDSSSGQI 1243
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY A + E+ + +++++ASD D + + + Y ++ GN E F ID
Sbjct: 1190 VYQASVSESAPNVTQLLRVSASDVDENKNGLVQYHVAEGNEEGQFMIDSSSGQITLVGKL 1249
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
I D P ++ I V + NDN P ++EN
Sbjct: 1250 DYETTSSYSLKIIAVDGGAEPLSSSCMLSISVLDENDNSPSFPKSSVSVDVLENMRIGEL 1309
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D P+ I+Y I+A N F+I +GS+
Sbjct: 1310 VASVTATDTDSGPNADITYSITATNNHGTFSISPNTGSI 1348
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + VY V +VNDN P+ Y A + E+ +V + ASD D P+ ++
Sbjct: 1989 GGGQASTVRVYFNVLDVNDNPPVFETTTYSASVSESLPAGSSVVTVVASDADDGPNAQLF 2048
Query: 120 YKISAGNPESYFNI 133
Y+I++G+P+ +F I
Sbjct: 2049 YRIASGDPQGHFLI 2062
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 27/144 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---------------------- 61
++A+DGD + + Y + +GN +F+I S L
Sbjct: 475 VSATDGDSGQNANLRYSLVSGNALGWFSISENSGLVTSAALLDREATSEVVLNISAKDQG 534
Query: 62 --PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
P Y + I + +VND VP ++ + E+ ++ L+A+DGDL P+ +
Sbjct: 535 LQPRISYTKLIINITDVNDQVPTFTQSTFHVSLAEHAPAGTQLLVLSATDGDLGPNGTMR 594
Query: 120 YKISAGNP---ESYFNIDIGSGSL 140
+ A P + F +D SG L
Sbjct: 595 FSFDAETPAAAQGRFRLDPLSGRL 618
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---ESYFNID-IGSDLTGG 61
++ + E+ ++ L+A+DGDL P+ + + A P + F +D + L+
Sbjct: 562 TFHVSLAEHAPAGTQLLVLSATDGDLGPNGTMRFSFDAETPAAAQGRFRLDPLSGRLSTA 621
Query: 62 -----PDQVYLIVYIQV------------------QNVNDNVPMTLDPVYYAQIVENQSG 98
+Q ++++QV ++VNDN P+ Y+A + EN+
Sbjct: 622 VELDREEQASYLLHVQVTDGGSPPLRSAGKVNVTLRDVNDNRPVFYPLQYFANVKENEPS 681
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++A+D DL + + Y I+AG+ + F+I+ +G +
Sbjct: 682 GSYVTTVSATDPDLGRNGTVKYMITAGDAAT-FHINGNTGKI 722
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 37/150 (24%)
Query: 25 AASDGDLDPD--QRISYKISAGNPESYFNIDI-------GSDL----TGGPDQV------ 65
A+D D+ + +Y+I GN + F +DI G+ L TGG D+
Sbjct: 143 TATDTDIGSNGVDHTTYRIVKGNEQRKFRLDITVNPSGEGAFLHLVSTGGLDREVTPFYQ 202
Query: 66 ---------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
YL V + +Q++NDN P +Y A ++E+ + I+Q+ ASDG
Sbjct: 203 LLIEVEDKGEPKTFGYLQVNVTIQDINDNPPSFERDLYQASVLEDAAVGSSILQVTASDG 262
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D + I Y + P F ID +G++
Sbjct: 263 DEAANAEIRYFLDEETP---FQIDPKTGTI 289
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGN-----------------------PESYFNIDIGSD 57
+ + A+D D P+ I+Y I+A N +S + +++ +
Sbjct: 1310 VASVTATDTDSGPNADITYSITATNNHGTFSISPNTGSIFLVKKLDYETQSVYKLNVSAK 1369
Query: 58 LTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + I V I V++ NDN P+ + I EN ++ + A D D D +
Sbjct: 1370 DNGRPSRSSSIPVIIHVRDFNDNPPIFTPGDIFKSIPENLPVATSVMMIVAHDTDADING 1429
Query: 117 RISYKISAGNPE-SYFNIDIGSGSL 140
++ Y I P ++F+ID +G L
Sbjct: 1430 QLEYSIVQQVPRGNHFSIDASTGVL 1454
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 21/128 (16%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGP---------DQVYLI-----------VY 70
+D + +SY I++G+ F ++ +T Q+ ++ V
Sbjct: 797 VDLNTNVSYLITSGDQRGLFAVNSAGQITASSPIDREEQSFHQLKVVARAGQITGEVSVN 856
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V+++NDN P + V + VEN S I Q ASD D + + Y + NP
Sbjct: 857 ITVKDLNDNAPRFIHAVEHVSAVENWSTGHTIFQAKASDPDEGANGVVVYSLKQ-NPRGL 915
Query: 131 FNIDIGSG 138
F+I G
Sbjct: 916 FHIHEKHG 923
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------ 47
+Y +I EN ++Q+ A+D D + +I + IS N +
Sbjct: 2226 IYDIEIEENTLTGTDVIQVFATDADEGTNGQIRFSISGSNTDFRIYSVTGMISVARQLDR 2285
Query: 48 ----SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
SY + +D P V I + +VND P+ Y ++ EN + +
Sbjct: 2286 EARSSYSLLVQATDRGSSPRMDQATVNIVLLDVNDCAPVFELSPYTVRVQENLENLPTNV 2345
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
+Q+ A D D + ++SY +S GN + F++ G
Sbjct: 2346 LQVVARDDDQGANGQLSYMLSGGNDDGAFSLSSG 2379
>gi|348507435|ref|XP_003441261.1| PREDICTED: cadherin-23-like [Oreochromis niloticus]
Length = 3464
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 2 TLDP-VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------ 54
T +P VY + E+ + +L+ D D + +SY I+ GN + F++
Sbjct: 1094 TFNPRVYNVSLKESVPRDHTVARLSCFDNDAGLNAELSYFITDGNQDGKFSVGFRDGIVR 1153
Query: 55 -------------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
GS TG V+++VQ+VNDN P+ L Y
Sbjct: 1154 TVVGLDRETQAAYTLIIEAIDNGPAGSRRTGTA-----TVFVEVQDVNDNRPIFLQNSYE 1208
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+E+ I+Q+ A+D D + R+ Y+I GN + F+ID SG
Sbjct: 1209 TSILESVPRGTSILQVQATDADQGENGRVLYRILTGN-NNLFSIDRDSG 1256
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + +VNDN P+ Y + EN G +V++ A+D D+ P+ + Y ++AGN +
Sbjct: 1614 INILDVNDNAPVVESQRGYNVSVSENVGGGTSVVRVMATDRDIGPNAMLFYYLTAGNQDL 1673
Query: 130 YFNIDIGSGSL 140
F +D +G +
Sbjct: 1674 TFRMDRVTGEM 1684
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++NI + + G P + ++V + V ++NDN P+ L+ Y + E S + ++
Sbjct: 1914 AFYNITVTARDLGTPSRNSSVLVGVYVLDINDNDPVLLNLPYNTSVSEGASIHTSVARVR 1973
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D + ++Y I+AGN + F I+ +G
Sbjct: 1974 AQDADSGRNALLTYNITAGNQDGAFYINDTTG 2005
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLT--GGP 62
Y + EN G +V++ A+D D+ P+ + Y ++AGN + F +D G +T P
Sbjct: 1632 YNVSVSENVGGGTSVVRVMATDRDIGPNAMLFYYLTAGNQDLTFRMDRVTGEMVTRPSPP 1691
Query: 63 DQ---------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +Y+++ + NDN P + Y + E +
Sbjct: 1692 DRERQAEYQLTVTVEDDGTPPLSTSTTIYVRIVDENDNAPEFPEEEYVTVLSEGPETVGA 1751
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I + A D D + + Y I++GN FNI+ +G +
Sbjct: 1752 TIATVTAIDPDEGLNGTLRYAIASGNLIQTFNINSITGRI 1791
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V + V +VNDN P+ Y + EN+ + + ++ A+D D P+ ++
Sbjct: 638 GGGEETTGRVRVNVLDVNDNAPLFQKEAYVGSLRENEQTVQSVARIRATDEDSPPNNVLT 697
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y IS YF I + G
Sbjct: 698 YTIISVSAFPDYFRIIMVEG 717
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 49 YFNIDIGSDLTGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+ N I + G P ++ L VY+++ +VNDN P+ + P Y + EN IV++ A
Sbjct: 2466 WLNFTIRAQDHGTPPRIAELPVYLRIVDVNDNNPVFVQPSYQEPVFENVDLGTTIVRVRA 2525
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D I Y + G E F I +G +
Sbjct: 2526 TDADSGLFAVIEYSLVDG--EGKFGIRPSTGEI 2556
>gi|301753499|ref|XP_002912636.1| PREDICTED: protocadherin gamma-B6-like [Ailuropoda melanoleuca]
Length = 905
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + +VNDN P+
Sbjct: 406 TDGALDREQTPEYNVTI----------TATDRGKSPLSSSTTITLHITDVNDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|194219789|ref|XP_001917793.1| PREDICTED: protocadherin gamma-B7-like [Equus caballus]
Length = 836
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + V +VNDN P+
Sbjct: 406 TDGALDREQ---------TPE--YNVTITATDRGKPPLSSSTTITLHVTDVNDNAPVFRQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 455 SAYLVHVPENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 512
>gi|260809727|ref|XP_002599656.1| hypothetical protein BRAFLDRAFT_172188 [Branchiostoma floridae]
gi|229284937|gb|EEN55668.1| hypothetical protein BRAFLDRAFT_172188 [Branchiostoma floridae]
Length = 107
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGN 126
V I V NVND P T +P +Y A +VE + + +V AASD D D ++Y+I GN
Sbjct: 1 VSINVVNVNDMTP-TFNPAFYTASVVETSANVGTSVVTFAASDNDRGADGAVTYEIINGN 59
Query: 127 PESYFNIDIGSG 138
F ID +G
Sbjct: 60 SAGNFEIDTSTG 71
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 2 TLDPVYY-AQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
T +P +Y A +VE + + +V AASD D D ++Y+I GN F ID +
Sbjct: 14 TFNPAFYTASVVETSANVGTSVVTFAASDNDRGADGAVTYEIINGNSAGNFEIDTST 70
>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
Length = 4347
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
V+ Q+ EN ++ +AA D D D + Y + G + F+I D G T P
Sbjct: 1032 VHQGQVQENSPSGTSVMVVAAHDDDTGLDGELQYFLRGGTGLAAFSINQDTGMIQTLAPL 1091
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y + VYI+V +VNDN P PV+Y + E+
Sbjct: 1092 DREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYPTVREDAPLHTS 1151
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++QL A D D ++++ I++GN +F + +G L
Sbjct: 1152 VLQLDAWDLDSSSKGKLTFNITSGNHMGFFVLHPLTGLLA 1191
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2272 VYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2331
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2332 ELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVSELATCG 2391
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2392 HLVLKVQALDPDSRDTSRLEYLILSGNQDRHF 2423
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A+D D D ++SY++ N F ID +
Sbjct: 2798 DP-YKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAIDSETGWIT 2856
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L +Q+Y ++V + + + NDN P Y +VEN
Sbjct: 2857 TLQELDCETNQIYHFYVVAYDHGRTIQLSSQVLVEVSITDENDNAPRFASEDYRGSVVEN 2916
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
P+ L D D+ + +++++ I+ G+P F I
Sbjct: 2917 SEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGI 2955
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2170 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2286
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2287 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2327
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAG 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2781 VNIQVKDVNDNRPIFEADPYKAVLTENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGS 2840
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2841 NIHELFAIDSETG 2853
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
I+E+ P+ LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 720 ILESAPLNTPLAHLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEAT 779
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ NDN P Y I E+ + +L
Sbjct: 780 SFYVLNVTVYDLGTPQKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISEDTEVGTTVAELK 839
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R+ Y + + P F++ +G +
Sbjct: 840 AKDVDSEDNGRVRYVLLS--PTEKFSLHPLTGEM 871
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN P+ L D D+ + +++++ I+ G+P F I +G +
Sbjct: 2909 YRGSVVENSEPGEPVATLKTLDADIAEQNRQVTCYITEGDPLGQFGISQVGDEWRIFSRK 2968
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V I V ++NDN P +Y ++ E+ I
Sbjct: 2969 TLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCSQLLYTGKVSEDVPPEHFI 3028
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3029 LKVSATDLDSDTNAQITYSLH-GPGADEFKLDPHTGDL 3065
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 21/139 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------- 50
P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2378 PHYEANVSELATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINSSSGIISMYNL 2437
Query: 51 ---NIDIGSDL-TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++D +L G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2438 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHIYEAELAENAKVGTKVI 2497
Query: 104 QLAASDGDLDPDQRISYKI 122
+L A D D P + Y I
Sbjct: 2498 ELLAIDKDSGPYGTVDYTI 2516
>gi|47214524|emb|CAG04544.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2087
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTG 60
L+ +Y + E++ I+ + A+D D + ++ Y+I+AGN F+++ +G+
Sbjct: 678 LESLYEVSVEEDKEVGFVIITVTANDEDEGANAKLRYQIAAGNSMGAFDVEPEVGTIFVA 737
Query: 61 GP--------DQVYLI-----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
P Q+ L+ V ++V N ND P+ Y+A + E S + +
Sbjct: 738 RPLDYEAERRYQLRLVASDGKWENETLVVVEVLNRNDEAPVFSQSQYHAAVTEELSQLPV 797
Query: 101 PIVQLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
I+Q++A+D D + DQ + Y + F +D SGS+
Sbjct: 798 LILQVSATDPDQEADQGALRYSLHGQGAGGEFTVDQRSGSI 838
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + VY+ V +VNDNVP L Y A + E + Q++A+D D P + Y
Sbjct: 582 PLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAQTGTSVAQVSAADLDSGPHGTVRYL 641
Query: 122 ISAGNPES--YFNIDIGSGSL 140
I + +F+ID SG++
Sbjct: 642 ILRDDSGDWRFFDIDSLSGAI 662
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L Y A + E + Q++A+D D P + Y I + + DI S L+G
Sbjct: 604 LSSTYEATVPEGAQTGTSVAQVSAADLDSGPHGTVRYLILRDDSGDWRFFDIDS-LSGA- 661
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
IV + L+ +Y + E++ I+ + A+D D + ++ Y+I
Sbjct: 662 -----IVSRASFDREQKASYLLESLYEVSVEEDKEVGFVIITVTANDEDEGANAKLRYQI 716
Query: 123 SAGNPESYFNIDIGSGSL 140
+AGN F+++ G++
Sbjct: 717 AAGNSMGAFDVEPEVGTI 734
>gi|301755822|ref|XP_002913760.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Ailuropoda
melanoleuca]
Length = 3353
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDAPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF++ + G
Sbjct: 598 YSIVSASVFGSYFDVSVYEG 617
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y + E+ +V L +D D + +SY I+ GN + F++
Sbjct: 999 TYNVSVSEDVPREFRVVWLNCTDDDAGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V+I V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTATYTLVLEAIDNGPVGKRRTGTA-----TVFITVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1114 DIPEGHSIMQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + V +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGSPPRKKDHILQVTVLDVNDNPPVIESPSGYNVSVNENVGGGTAVVQVRATDRDV 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGG---P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDVGINSVLSYYITEGNEDMTFRMDRISGEIATRPALP 1592
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQGFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDSINA 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I +GN + F ID +G
Sbjct: 1653 SLITIQALDLDEGPNGTVNYAIVSGNIINTFRIDRHTG 1690
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN I +
Sbjct: 1815 AFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPANITISENSPVSSVIAHIL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFSINATTG 1906
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF++ +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDAPPNNQITYSIVSASVFGSYFDVSVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTSAELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I+V +VND P Y + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSATSTLTIRVLDVNDETPTFFPATYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDDDAGLNAELSYFITGGNVDGKFSV 1045
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2494 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGPNGELAYSLEGPGVE 2553
Query: 129 SYFNIDIGSG 138
+ F++D SG
Sbjct: 2554 A-FHVDTDSG 2562
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-------------DPDQR------ISYKISA---- 43
Y +VEN ++ L A+DGDL + DQR +S ++S
Sbjct: 588 YNVSVVENSPAGTELLVLGATDGDLGDNGTVRFSLQETESDQRLFRLDPVSGRLSTISSL 647
Query: 44 -GNPESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++++++ + +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F I+ SG
Sbjct: 708 ITTVSATDPDLGLNGTVRYSISAGD-RSRFQINAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISETAANLTQVLRVSASDVDEGKNGLIHYSVIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F I+ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGD-RSRFQINAQSGVISTRIALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV + V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTVTVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASSMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSP-RKILTVSAVDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2709 IVNGNKENSFSINHATGEI 2727
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D + R++ ++ +Y + +D P V + V ++NDN P+ +Y
Sbjct: 2100 GTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQALY 2159
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+I E+ I+Q+ A+DGD + ++ Y I GN F ID +G++
Sbjct: 2160 KVEINEDTLTGTDILQVFAADGDEGTNGQVRYGIVDGNTNQEFRIDSVTGAI 2211
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
I+Q+ A D D + ++SY + GN + F + +L
Sbjct: 2279 ILQVIARDDDQGSNSKLSYVLLGGNEDQAFTLSASGELRVTQSLDRETKEHFVLVITATD 2338
Query: 59 TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+G P + + V +VNDNVP +Y+ I E+ ++ + ASD D +
Sbjct: 2339 SGSPALTGTGTINVIVDDVNDNVPTFGSKMYFTTIPEDAPTGTDVLLVNASDADASTNAV 2398
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
ISY I GN S F I+ +G +
Sbjct: 2399 ISYSIIGGN--SQFTINPSTGQI 2419
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISETAANLTQVLRVSASDVDEGKNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPTYSLVIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A I E+ S + ++A D D + + Y ISAGN E F I+ + +
Sbjct: 3098 ATIPESHSIGTIVRTVSARDRDAAMNGLVRYSISAGNEEGIFAINSSTGVLVLAKALDYE 3157
Query: 60 -------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG Y V I V +VNDN P+ + Y+ ++EN ++
Sbjct: 3158 LCQKHEITIRATDGGWVARTGYCSVTINVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIH 3217
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y I + + + F ID +G
Sbjct: 3218 LNATDVDSGTNAVIAYSIQSSDSD-LFVIDPNTG 3250
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------F 50
Y+ ++EN ++ L A+D D + I+Y I + + + + F
Sbjct: 3201 YFPTVLENAPSGTTVIHLNATDVDSGTNAVIAYSIQSSDSDLFVIDPNTGIITTQGFLDF 3260
Query: 51 NIDIGSDLT----GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
LT PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3261 ETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVG 3320
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3321 EVFASDRDMGTDGEVHYLIFGNSRKKGFQINKRTGQI 3357
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F I S L TGG
Sbjct: 497 VSATDGDSGLNANLRYSIISGNKLGWFCISEHSGLVTTGATGGLDRELASEIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPAGTELLVLGATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + + + F +D SG L
Sbjct: 617 TVRFSLQETESDQRLFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASSMDLNSNISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN I Q A D D + + Y +
Sbjct: 874 TGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F+I+ +G++
Sbjct: 934 Q-NPKNLFSINEKNGNI 949
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I E+ I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2158 LYKVEINEDTLTGTDILQVFAADGDEGTNGQVRYGIVDGNTNQEFRIDSVTGAITVAKPL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+D P V I + ++ND VP+ Y + EN +
Sbjct: 2218 DREKIATYLLTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLETLPR 2277
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + ++SY + GN + F + SG L
Sbjct: 2278 TILQVIARDDDQGSNSKLSYVLLGGNEDQAFTLS-ASGEL 2316
>gi|281345411|gb|EFB20995.1| hypothetical protein PANDA_000352 [Ailuropoda melanoleuca]
Length = 1951
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
DG LD +Q Y ++ +D P + + + +VNDN P+
Sbjct: 1075 DGTLDREQTPEYNVTI----------TATDRGKSPLSSSTTITLHITDVNDNAPVFHQAS 1124
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 1125 YVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 1180
>gi|410948499|ref|XP_003980976.1| PREDICTED: protocadherin gamma-B2 [Felis catus]
Length = 816
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLD 85
+DG LD ++ NPE +NI I + G P I + + + +VNDN P+
Sbjct: 408 TDGPLDREE---------NPE--YNITIMATDRGKPPLSSSINITLHIADVNDNAPVFEQ 456
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y I EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 457 VFYLVHIAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 514
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP- 127
+ IQV + NDN P+ + VY + E ++Q+ A+D D + I+Y +
Sbjct: 230 IQIQVTDANDNAPVFIQDVYKVSLQEGVPLGFSVLQVTATDQDEGVNAEITYSFHHVDEL 289
Query: 128 -ESYFNIDIGSGSL 140
E +FN+D +G +
Sbjct: 290 VEKFFNLDKRTGEI 303
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 66/165 (40%), Gaps = 37/165 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y+AQ+ EN ++Q++A D DL + + Y I AGN + + N+D I L
Sbjct: 2562 YHAQVSENSQIGTSLLQVSAQDPDLGINGLVRYDIIAGNNKGHLNLDPHTGLLLINHSLD 2621
Query: 60 GGPDQVYL--------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D Y +V+I V + NDN P + P ++EN
Sbjct: 2622 YEQDPKYTLTIRASDAGEAAENHKVSFAVVFITVSDENDNTPYFMFPAVNCSVLENLPAF 2681
Query: 100 LPIVQLAASDGDLDPDQRISYKI--------SAGNPESY--FNID 134
+ A D DL +++Y I S GNPE F ID
Sbjct: 2682 THTCSVLAVDNDLGSYGQLTYSIVSPCFMDYSGGNPEKKEAFAID 2726
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V + V + NDN P+ Y+AQ+ EN ++Q++A D DL + + Y I AGN
Sbjct: 2542 VVRVTVTDCNDNAPIFSSTEYHAQVSENSQIGTSLLQVSAQDPDLGINGLVRYDIIAGNN 2601
Query: 128 ESYFNIDIGSGSL 140
+ + N+D +G L
Sbjct: 2602 KGHLNLDPHTGLL 2614
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT----- 59
VY + EN I ++ A D ++ QRI+Y I +GN F+I+ + D+
Sbjct: 2032 VYNVSVKENSRAGTWIAKVEARDQTIN-SQRITYSIFSGNENHIFSINRHTGDIRVQKDN 2090
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G Y V I + ++NDN P Y + E Q I
Sbjct: 2091 YLDFEVDPHMQLVVLGDSGLQTAYCRVSITLLDINDNAPQFEHSSYKTSVWEGQVLNTYI 2150
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+Q+ ASD D + +I Y I +GN F +D G L
Sbjct: 2151 MQVFASDADSGVNGQIEYSILSGNNNGAFILDSLGGILA 2189
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGP 62
Q++E+ + A DGDL + ++ + AGN + F+++ + S L
Sbjct: 1515 QVMEDAEVGSLLHHFLAIDGDLGANGVTTFSLIAGNSKGVFSLEERTGLLFLSSPLDYET 1574
Query: 63 DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
QV+ I + ++V +VND P+ + +Y A + EN+ P+V++
Sbjct: 1575 QQVHRITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSEIIYEASVAENRDAGEPVVRV 1634
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+A+D D + + + Y + G F+I+ SG
Sbjct: 1635 SATDIDSEENAVVWYSLLPGPGYELFSINPYSG 1667
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A +VE S +++++A D D P+ ++Y ++ + F+ID
Sbjct: 1826 YRASVVEGLSAGSEVLRVSAFDPDEGPNGDVTYSLTEDGNQGAFSIDAFTGVIRTTKSLD 1885
Query: 54 -----------IGSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ SD + GP + V IQV++VNDN+P+ + A +
Sbjct: 1886 RESRAQYTLRVVASDSCSQGPLSSVVSVSIQVEDVNDNIPICDQNPFDAWVSTRTPPNQI 1945
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+DGD + + +++ + E+ F+I+ SG +
Sbjct: 1946 LTTVTATDGDEGENGTVEFRLY--DEENLFDINSESGEI 1982
>gi|291387510|ref|XP_002710181.1| PREDICTED: protocadherin gamma subfamily B, 6 [Oryctolagus
cuniculus]
Length = 1066
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ I +D P V +++ +VNDN P+
Sbjct: 695 TDGTLDREQTPEYNVTI----------IATDGGQPPLSSSSTVTLRIGDVNDNAPVFHQA 744
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD D+ P+ ++SY I A + E SY ++ SG
Sbjct: 745 AYVIHVPENNPPGASIAQVSASDPDVGPNGQVSYSIVASDLEPRALSSYVSVSAHSG 801
>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
rerio]
gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
Length = 2941
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ + I+Q+ A+D D + + + I +GN F ID + DL D
Sbjct: 464 YIVQVPEDLTPNTEILQVTATDQDRGNNAVVHFSIMSGNTRGQFYIDAQTGKLDLVSQLD 523
Query: 64 ----------------------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV ++NDN P+ + + A ++EN
Sbjct: 524 YEMNKEYTLRIRAQDGGRPPLSNISGLVTVQVLDINDNAPIFVSTPFQATVLENVPVGYS 583
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ F I+ +G
Sbjct: 584 VIHIQAVDADAGDNSRLEYRLTETTANFPFTINNSTG 620
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP V+I V++ NDN P + Y Q+ E+ + I+Q+ A+D D + + +
Sbjct: 437 GPRSATATVHIVVEDDNDNAPQFSEKRYIVQVPEDLTPNTEILQVTATDQDRGNNAVVHF 496
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN F ID +G L
Sbjct: 497 SIMSGNTRGQFYIDAQTGKL 516
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
YY ++ E+ + +V ++A D D++ ++Y+IS+GN + F+I + +GG
Sbjct: 675 YYMRLNEDAAVGTSVVTVSAVDQDIN--SVVTYQISSGNTRNRFSI---TSQSGGGLITL 729
Query: 63 --------DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
++ Y++ VY+ V + N + P+ Y I E++
Sbjct: 730 ALPLDYKLERQYVLTVTASDGTRFDTAKVYVNVTDANTHRPVFQSSHYTVNINEDRPVGT 789
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D + RI+Y + P+ FNID SG++
Sbjct: 790 TVVMISATDEDTGENARITYIMDDSIPQ--FNIDADSGAV 827
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ + + EN L + ++ASD D + +I Y+I GN
Sbjct: 969 VTILDVNDNPPVFEKDEFDIFVEENSPIGLVVAHISASDPDEGSNAQIMYQIVEGNIPEV 1028
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 1029 FQLDIFSGEL 1038
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
+ A ++EN ++ + A D D + R+ Y+++
Sbjct: 570 FQATVLENVPVGYSVIHIQAVDADAGDNSRLEYRLTETTANFPFTINNSTGWIVVAAELD 629
Query: 48 ----SYFNIDIGSDLTGGPDQVYLIVYIQVQ-NVNDNVPMTLDPVYYAQIVENQSGILPI 102
++N + + G P +VNDN P YY ++ E+ + +
Sbjct: 630 RETVDFYNFGVEARDHGAPAMSSSASISMTILDVNDNNPEFTQKAYYMRLNEDAAVGTSV 689
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V ++A D D+ + ++Y+IS+GN + F+I SG
Sbjct: 690 VTVSAVDQDI--NSVVTYQISSGNTRNRFSITSQSG 723
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y I E++ +V ++A+D D + RI+Y + P+ FNID S
Sbjct: 777 YTVNINEDRPVGTTVVMISATDEDTGENARITYIMDDSIPQ--FNIDADSGAVTTQMELD 834
Query: 60 ----------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P D YL I V +VNDN P+ Y ++E+
Sbjct: 835 YEDQVSYTLAITARDNGIPQKSDTTYL--EILVNDVNDNSPVFQRDRYLGSVMEDIPVFT 892
Query: 101 PIVQLAASDGDLDPDQRISYKISAG 125
++Q++A+D D + R+ Y G
Sbjct: 893 SVLQVSATDRDSGLNGRVFYTFQGG 917
>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
Length = 3396
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 28/143 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------------DL 58
IV++ A D D + ISY+I + S ID + +
Sbjct: 681 IVRVQAYDSDEGVNSEISYRIQDRDENSPLAIDSRTGWIHTTSPLDREEKSRYVFQVVAI 740
Query: 59 TGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPD 115
GG P V + +Q++NDN P+ +P YY A I E+Q P+ + A+ DLD D
Sbjct: 741 DGGIPPKSASTSVVVTIQDINDNDPI-FNPKYYEASIAEDQPPGTPVTTVTAT--DLDED 797
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
R+ Y+I++GN F+I +G
Sbjct: 798 SRLHYEITSGNTRGRFSITSQNG 820
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
+P YY A I E+Q P+ + A+D LD D R+ Y+I++GN F+I
Sbjct: 767 FNPKYYEASIAEDQPPGTPVTTVTATD--LDEDSRLHYEITSGNTRGRFSITSQNGRGLI 824
Query: 54 -IGSDLTGGPDQVYL---------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I L +Q + IV I + + N+ P+ + Y A + E+
Sbjct: 825 TIAQSLDYKQEQRFALTVSATDSGQRSDQAIVNINITDANNFAPVFENAPYTASVFEDAP 884
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESY-----FNIDIGSGSL 140
++ + ASD D+ + +I+Y ++ G+ F++ + +G++
Sbjct: 885 VGTTVLMVFASDNDVGLNAQITYSLNEGSSNGLGSNEPFSVHVQTGAI 932
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 42/172 (24%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---------GNPESYFNID--IG 55
++A + E S ++ + A+D D+ + I Y I++ N ++ F I+ G
Sbjct: 443 FHANVREGTSVGSSVITIRATDQDIGKNGEIEYSIASVSGDNVTVGENADNLFRIEARTG 502
Query: 56 SDLTGGP-----DQVYLI--------------------VYIQVQNVNDNVPMTLDPVYYA 90
+ T G ++Y+I V++ V + NDN P + Y
Sbjct: 503 TITTRGALDREISEMYVIQVMATDMAIPQSERKSTTATVFVNVLDDNDNYPQFSERTYTV 562
Query: 91 QIVE----NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ E N++ + I Q+ A+D D + + Y I GN +S F++D SG
Sbjct: 563 HVSEDQWTNENNV--IAQIRATDADKGNNAAVRYAIIGGNTQSQFSMDSISG 612
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + ++NDN P P+Y A I E+ ++Q++A+D D+ + R+ + +S+ + E
Sbjct: 966 VEISITDINDNSPQFDVPLYQATIAEDAFIGTSVLQISATDDDMGLNGRVKFMLSSKDVE 1025
Query: 129 -SYFNIDIGSG 138
F ID SG
Sbjct: 1026 DGSFVIDPSSG 1036
>gi|440902417|gb|ELR53214.1| Protocadherin gamma-A11, partial [Bos grunniens mutus]
Length = 732
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P V +++ +VNDN P+
Sbjct: 408 TDGALDREQ---------TPE--YNVTIAATDRGKPPLSSSRSVTLRITDVNDNAPVFHQ 456
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY +++ SG
Sbjct: 457 ASYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRPLSSYLSVNPQSG 514
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 30/168 (17%)
Query: 3 LDPVYYAQIV------ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--- 53
L P ++A V EN ++ AA D D D + Y + G + F+ID
Sbjct: 1022 LHPPHFASFVSRGSVQENSPRGTLVMTAAAQDPDPGRDGELQYFLREGTGLATFSIDHET 1081
Query: 54 ---------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
+ DL P V+I+V +VNDN P PV+Y +
Sbjct: 1082 GTIRTVGPLDRERTPHYWLTVLAVDLGSVPLSAVTEVFIEVTDVNDNPPQMSRPVFYPSV 1141
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
E+ ++QL A D D ++++ I +GN F ID +G L
Sbjct: 1142 REDAPLNTSVLQLDAWDQDSSSKGKLTFHIISGNQHGNFAIDPITGLL 1189
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ I +GN F ID + L Q
Sbjct: 1135 PVFYPSVREDAPLNTSVLQLDAWDQDSSSKGKLTFHIISGNQHGNFAIDPITGLLSTSRQ 1194
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ +++ V IQV +VNDN P ++ ++ E +G +
Sbjct: 1195 LDRENKAEHILEVAVMDNGEPGLQSTSRVVIQVLDVNDNHPAFSHKLFKVRLPERSNGRV 1254
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D P+ +I+Y + N E F+I +G
Sbjct: 1255 FEPLYRLVASDRDEGPNGQITYSLEE-NDEGNFSIHPTTG 1293
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V+++V+++NDN P+ VY A + E P+++L A+D D + +SY+I +
Sbjct: 2253 VHVEVEDINDNPPVFSQTVYTASVSEGLPAHTPVIRLLAADRDSGRNGAVSYQIVEDGSD 2312
Query: 127 PESYFNIDIGSGSLG 141
+F +D +G +
Sbjct: 2313 ASEFFQVDGRTGQMA 2327
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV++VNDN P+ Y A ++EN ++Q+ A+D D D +++Y ++A +
Sbjct: 2779 VNIQVKDVNDNQPVFEADPYKAFLMENMPVGTTVIQVTANDQDTGSDGQVTYSLAAESDW 2838
Query: 129 --SYFNIDIGSG 138
F ID SG
Sbjct: 2839 VGELFAIDRESG 2850
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPM 82
+L + G L + + +++S E Y +I+ V +V I V +VND+ P
Sbjct: 3260 RLNSRTGSLYVNGSLDFEVSH---EHYLSIECSRKGASSLSDVMTVV-INVTDVNDHEPK 3315
Query: 83 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+Y I E+ + I+ L A D D + ++Y + G+P+ +F I G +
Sbjct: 3316 FTQELYSTDIREDAAVGETILTLTAVDEDGPMNSNVTYSLVGGDPQGHFAIHPKRGEI 3373
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F I+ S +
Sbjct: 2377 PQYEANVSELATCGHLVLKVQALDPDSGETTRLEYLILSGNEDRHFTINSSSGIISMFNL 2436
Query: 59 ------------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
D V+ + VYI N N P VY A++ EN ++
Sbjct: 2437 CRRHLDPAYRLRVAASDGVFRSTVPVYINTTNANKYSPAFDQHVYEAELAENAMAGTKVI 2496
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
+L A D D P + Y I F +D
Sbjct: 2497 ELLAVDPDDGPYGTVDYIIINKLASEKFAVD 2527
>gi|410948509|ref|XP_004001538.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B4 [Felis
catus]
Length = 803
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P V + V +VNDN P+ P
Sbjct: 404 TDGVLDREQTPEYNITI----------TATDRGKPPLSSSSSVTLHVGDVNDNAPVFPQP 453
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y +VEN I Q++ASD DL P+ +SY I A + E SY ++ SG
Sbjct: 454 SYVVHVVENNPPGASIAQVSASDPDLGPNGHVSYSIVASDLEPRALASYVSVSAQSG 510
>gi|328701666|ref|XP_003241675.1| PREDICTED: protein dachsous-like [Acyrthosiphon pisum]
Length = 3383
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 31/154 (20%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNID------------------ 53
EN + PI A+D D + ++ Y++ A E SYF +D
Sbjct: 878 ENVATGSPIYTAHATDPDSGANGQVHYELIASTQEPSYFQVDHNRGTISLIHGLDYETVH 937
Query: 54 ------IGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
I D +G P D + L+V VQ++NDN P+ P Y A ++E+ + IVQ
Sbjct: 938 RLTVTVIARD-SGVPSLSDNMTLVV--DVQDINDNPPVFERPHYAATVLESLAVNSQIVQ 994
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A DGD + R++Y+IS+G+ ++ G+G
Sbjct: 995 VTALDGDSGNNARVTYRISSGDGGGSLDVHPGTG 1028
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTL--DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Y+ V++ V + NDN P + + EN IV++ ASD D P+ +SY+I+
Sbjct: 2542 YVFVHVIVDDANDNAPQFTVNEQQSLLSLPENTPVGHSIVRMTASDSDTPPNSDVSYEIT 2601
Query: 124 AGNPESYFNIDIGSG 138
+GN ++YF+ID +G
Sbjct: 2602 SGNSKNYFDIDRNTG 2616
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 28/119 (23%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
IV++ ASD D P+ +SY+I++GN ++YF+ID +
Sbjct: 2580 IVRMTASDSDTPPNSDVSYEITSGNSKNYFDIDRNTGDVFVKSVLDCDLDVSEHNLVVKA 2639
Query: 57 -DLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
D PD+ ++ I++++VNDN P Y + EN+ + A+D D
Sbjct: 2640 QDGAKSPDRQLATVKLLKIRLEDVNDNTPRFPVSEYLEFVGENEPIGALVFTAKATDAD 2698
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-- 124
+ V + V +VNDN P YYA + EN + I+Q+ A+D D + + Y IS
Sbjct: 211 MTVNVTVLDVNDNQPAFNQSRYYATVPENATVSTSILQVHATDVDDGDNGVVEYSISRRQ 270
Query: 125 GNPESYFNIDIGSG 138
+ E YF +D +G
Sbjct: 271 SDKEGYFTVDRQTG 284
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------SD 57
P Y A ++E+ + IVQ+ A DGD + R++Y+IS+G+ ++ G S
Sbjct: 976 PHYAATVLESLAVNSQIVQVTALDGDSGNNARVTYRISSGDGGGSLDVHPGTGWVYVKSP 1035
Query: 58 LTGGPDQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGI 99
L Y + + N VNDN P Y + EN+
Sbjct: 1036 LDRETQDTYELTVVAADNGSPGPLAATVVVVVTVADVNDNDPEFDQEHYEFHVEENRPAG 1095
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A+D D + I Y + N S FNI++ SG L
Sbjct: 1096 TAFGAVSATDRDAGDNALIRYSLIPSN--SSFNINLYSGEL 1134
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R +Y +S I +D P ++ V +VNDN P+ P Y+A
Sbjct: 403 LDRESRPNYTLSV----------IATDAGSPPLHASKTFHLLVTDVNDNRPVFAAPEYWA 452
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ E + ++ A+D D + ++YK+ P +F +D +G
Sbjct: 453 SVSETAEPGTSVARVLATDEDEGDNAALTYKMR-DPPPLWFQVDPLTG 499
>gi|348546115|ref|XP_003460524.1| PREDICTED: protocadherin gamma-A1-like, partial [Oreochromis
niloticus]
gi|348546117|ref|XP_003460525.1| PREDICTED: protocadherin gamma-A1-like, partial [Oreochromis
niloticus]
Length = 606
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDN 79
++ ++A D +L+P+ +NI + + +G P ++ +++ +VNDN
Sbjct: 411 LITVSAFDRELEPE---------------YNITVRASDSGTPSLSSTTVLRLRISDVNDN 455
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNP-ESYFNID 134
P+ Y A I EN S + I ++A D D + + RISY + +GNP SY +I+
Sbjct: 456 APLFDKNSYLAYITENNSPGMSIFSVSARDSDWNQNARISYFLEETQISGNPTSSYMSIN 515
Query: 135 IGSGSL 140
+G++
Sbjct: 516 AETGAV 521
>gi|312378848|gb|EFR25304.1| hypothetical protein AND_09493 [Anopheles darlingi]
Length = 3184
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V + +Q+VNDN P T P YY A + E+Q P+ + A+D D D R+ Y
Sbjct: 1022 PKSASTSVIVTIQDVNDNDP-TFSPKYYEAMLAEDQPPGTPVTTVTATDP--DEDARLHY 1078
Query: 121 KISAGNPESYFNIDIGSG 138
+I+AGN F I +G
Sbjct: 1079 EITAGNTRGRFAITSQNG 1096
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-P 127
V I V +VNDN P+ P+Y A I E+ +VQ+ A+D D+ + R+ Y +S +
Sbjct: 1242 VEIAVTDVNDNAPVFKVPLYQATIPEDALIGTSVVQIGATDLDMGLNGRVKYALSQKDMD 1301
Query: 128 ESYFNIDIGSG 138
E F +D SG
Sbjct: 1302 EGSFVVDPISG 1312
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVE----NQSGILPIVQLAASDGDLDPDQRISYKISA 124
V +++ + NDN P + Y Q+ E N++ ++ +Q A+D D + I + I
Sbjct: 817 VLVKILDDNDNYPQFSERTYTVQVREDQWTNENNVIAHIQ--ATDADQGNNAAIRFAIIG 874
Query: 125 GNPESYFNIDIGSGSL 140
GN +S F+ID SG +
Sbjct: 875 GNTQSQFSIDSMSGDV 890
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A + F +D
Sbjct: 588 YDVSVVENAPTGTELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDSVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + +VNDN P+ Y+A I EN+ G
Sbjct: 648 DREEQGFYSLLVLATDLGSPPQSSIARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTVRYSISAGD-RSRFQVNAQSG 743
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYYVIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I G+
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVCATDGDEGTNGQVRYGIVDGDAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ + A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSP-RKILTVLAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F+I+ +G +
Sbjct: 2707 IVNGNKEHSFSINHATGEI 2725
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDDDSGTNAVIAYTIQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLRGTNEYVPRFVSKLYYFEISEAAPKGTVV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYYVIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGATSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLGATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + F +D SG L
Sbjct: 617 TVRFSLQEAETDQRSFRLDSVSGRL 641
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-------------DPDQR------ISYKISA---- 43
Y +VEN ++ L A+DGDL + DQR +S ++S
Sbjct: 588 YEVSVVENAPTGTELLVLRATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSL 647
Query: 44 -GNPESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+S++++ + +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQSFYSLLVLATDLGSPPQSSVARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + I Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D + ++SY + GN +S F + +L
Sbjct: 2192 YSVHVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDSAFTLSDSGELRVTQSL 2250
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ LIV + V +VNDNVP +Y+ I E+
Sbjct: 2251 DRETKEHFVLIVTATDSGSPALTGTGTINVIVDDVNDNVPTFASKLYFTTIPEDAPTGTD 2310
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY+I GN S F I+ +G +
Sbjct: 2311 VLLVNASDADTSTNAVISYRIIGGN--SQFTINPSTGQI 2347
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P + Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFVKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVVKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 31/131 (23%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGG---------------------------PDQVYLIV 69
+SY I++GN S F ID LTG P Y +
Sbjct: 2529 LSYYIASGNLGSTFQID---QLTGQVSISRPLDFEKMQKYVVWIEARDGGFPPFSSYEKL 2585
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ + + ++I+EN S I+ ++A+D D P+ ++ Y I GN E
Sbjct: 2586 DIAVLDVNDNAPIFKEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYDIVNGNKEH 2644
Query: 130 YFNIDIGSGSL 140
F+ID +G +
Sbjct: 2645 SFSIDHATGEI 2655
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + I Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q +V I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQVVATDGGNLQSPNQA--VVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNAN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 27/154 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y ++ EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2086 LYQVEMNENTLTGTDIIQVYAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPL 2145
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + + ND VP+ Y + EN G LP
Sbjct: 2146 DREKTPVYSLTVQATDRGSTPRTDTATVSIVLLDSNDFVPIFELSPYSVHVPENL-GTLP 2204
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
I+Q+ A D D + ++SY + GN +S F +
Sbjct: 2205 RTILQVVARDDDQGSNSKLSYVLFGGNEDSAFTL 2238
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y ++ EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2068 VTVMVLDINDNNPVFAQALYQVEMNENTLTGTDIIQVYAADGDEGTNGQVRYGIVDGNAN 2127
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2128 QEFRIDSVTGAI 2139
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 24/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----- 60
+Y+ I E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 2296 LYFTTIPEDAPTGTDVLLVNASDADTSTNAVISYRIIGGNSQFTINPSTGQIITSALLDR 2355
Query: 61 ------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GP V + V +VNDN P Y I +
Sbjct: 2356 ETRENYTLVVVSSDAGSPGPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGAFV 2415
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +D D+ P+ + Y +S N E F+ID G++
Sbjct: 2416 FAVTVTDADIGPNSELHYSLSGRNSEK-FHIDPLRGAI 2452
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y A I E+ + + +++++ASD D + I Y + GN E F ID S D
Sbjct: 1215 YQATISESAANLTQVLRVSASDVDEGNNGLIHYSVVKGNEERQFAIDSTSGQVTLIGKLD 1274
Query: 58 LTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P +I + I + + NDN P + ++EN +
Sbjct: 1275 YEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELV 1334
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D + + Y I+ N F+I +GS+
Sbjct: 1335 SSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 38/170 (22%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDI------- 54
DP E+ S ++ A+D D+ + SY+I GN E F +DI
Sbjct: 137 DPSIIVTFKEDSSSGRQVILDTATDADIGSNGVDHHSYRIVQGNEEGRFRLDITLNPSGE 196
Query: 55 GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVYY 89
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 197 GAFLHLVSEGGLDREVTPQYQLLVEVKDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQ 256
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F ID +G
Sbjct: 257 AGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQIDPETG 303
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD--QRIS 119
P +V ++V+ ++NDN P+ DP E+ S ++ A+D D+ + S
Sbjct: 118 PTEVRVLVW----DLNDNAPVFPDPSIIVTFKEDSSSGRQVILDTATDADIGSNGVDHHS 173
Query: 120 YKISAGNPESYFNIDI 135
Y+I GN E F +DI
Sbjct: 174 YRIVQGNEEGRFRLDI 189
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L GG
Sbjct: 497 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDREVASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPQGYEVSVVENAPTGTELLVLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A + F +D SG L
Sbjct: 617 TVRFSLQEAETDQRSFRLDPVSGRL 641
>gi|156365975|ref|XP_001626917.1| predicted protein [Nematostella vectensis]
gi|156213810|gb|EDO34817.1| predicted protein [Nematostella vectensis]
Length = 943
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQ----VYLIV 69
I+Q+ A D D Q + Y I +GN F ID + S L P + L V
Sbjct: 780 IIQVQARDIDSGISQNLHYSIVSGNSLGRFFIDSSSARVYVKSPLDRDPPRNEGAYTLEV 839
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + +VND+ P +Y +I EN + ++Q + D DL + +ISY IS+GN E+
Sbjct: 840 TITISDVNDSPPEFSQAMYSVRIPENITLGTVVLQPSCVDRDLGTNGQISYHISSGNSET 899
Query: 130 --YFNIDIGSGSL 140
F+++ SG+L
Sbjct: 900 PPRFSVNPSSGAL 912
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIG-SDLTGGP 62
Y A++ E+ + + + A DGDL ++ +SY I G +P+ Y + ++
Sbjct: 248 YTAKVAESSTKGFYVTTVTARDGDLSLNKPVSYFIDQGITTSPQHYEPVSSSIKAISTIH 307
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V+ V I + ++NDN P ++ Y + EN L ++++ A D D + + +Y +
Sbjct: 308 KAVFATVQITITDINDNAPKFVNLPYSGTVPENSPTGLTVLRVTAQDADSGDNAKFTYSL 367
Query: 123 SAG 125
+
Sbjct: 368 TGA 370
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 35/157 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-----------DIG 55
Y + EN G + A+D D + I Y I+ GN + F I D G
Sbjct: 139 YSISVKENTLGTTGFA-VKATDADQGQNALIKYSITGGNEANMFKIGAYEGTISVFPDSG 197
Query: 56 ----------------SDLTG--GPDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQ 96
SDL G G V+I+V++V+D +P P YY A++ E+
Sbjct: 198 VLDYEKYKSFNLTVSASDLGGVNGSRTAVTSVFIRVEDVDD-LPAVFSPDYYTAKVAESS 256
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAG---NPESY 130
+ + + A DGDL ++ +SY I G +P+ Y
Sbjct: 257 TKGFYVTTVTARDGDLSLNKPVSYFIDQGITTSPQHY 293
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +Q+++VNDN P+ ++ Y + EN G + A+D D + I Y I+ GN
Sbjct: 120 VRVQIEDVNDNTPVFINTPYSISVKENTLGTTGFA-VKATDADQGQNALIKYSITGGNEA 178
Query: 129 SYFNIDIGSGSL 140
+ F I G++
Sbjct: 179 NMFKIGAYEGTI 190
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP--- 62
Y+ V+ + I+ L A+D D + + Y I +GN + F +D GS T GP
Sbjct: 657 YSVTVQEKRASHVILTLTATDSDRGINSALHYMIDSGNFGNSFTLDALTGSLSTTGPLDR 716
Query: 63 ---DQVYLIVYIQ---------------------VQNVNDNVPMTLDPVYYAQIVENQSG 98
+ L+V++ ++++NDN P+ Y I E+ +
Sbjct: 717 EVRAEYTLLVFVSDLQGNASLGIPLRDSAVVNVFIEDMNDNSPVFPQSQYSLTIPEDTAP 776
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D Q + Y I +GN F ID S +
Sbjct: 777 GTGIIQVQARDIDSGISQNLHYSIVSGNSLGRFFIDSSSARV 818
>gi|344265593|ref|XP_003404867.1| PREDICTED: protocadherin gamma-B1-like [Loxodonta africana]
Length = 911
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P V + + +VNDN P+
Sbjct: 406 TDGTLDREQTSEYNITI----------TATDKGKPPLSSSTSVTLHIADVNDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I +++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIARVSASDSDLGPNGRVSYSIVASDLEPRLLSSYVSVSAQSG 512
>gi|410915828|ref|XP_003971389.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3314
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-----------DIG 55
+ AQ+ ENQ ++++ A D D + ++Y G E F I ++
Sbjct: 1665 FEAQVTENQGPGTTVLRVTAVDRDQGSNGHVTY---GGVTEEGFVINPVTGVITTTKELD 1721
Query: 56 SDLTGG-------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
S+ G P+ +V ++VQ+VNDN P+ Y ++ ENQ + +
Sbjct: 1722 SEAQGHYTLTVYARDGGLPPNFAKALVRVEVQDVNDNAPVFAKLWYGLEVPENQEPV-QL 1780
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D D + Y+I+AG+P+ F++ +G+L
Sbjct: 1781 CFLKATDPDSGAGGELEYRITAGDPDGDFHLHPSTGAL 1818
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYI-QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+S++N+ + G P + + + + +VNDN P+ Y + E + I++L
Sbjct: 2566 KSFYNLTVVVSDRGVPQKSSSVAAVLTIGDVNDNPPVFSRAEYSVSLSEGAAAGTEIIRL 2625
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D P+ + Y IS+G+ + F ID +G+L
Sbjct: 2626 TATDPDSTPNAEVQYTISSGDEVNLFTIDQWTGAL 2660
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 1 MTLDPV----YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
+TLDPV Q ++ +S + + A+D +DP QR ++A
Sbjct: 1496 LTLDPVSGVLTLGQKLDRESTPSLFLVVRATDQAVDPSQRRWGSVTA------------- 1542
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V + NDN P+ P + ++E+Q I+ + A D D
Sbjct: 1543 -------------RVFVTDENDNAPVFSSPSAVS-VMEDQPVGFVILYVMARDEDEGEHG 1588
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+SY+I AGN F +D +GSL
Sbjct: 1589 RVSYRIQAGNSAGRFRLDADTGSL 1612
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ + + +Q+VNDN+P Y A + E Q LPI+Q+ A D D + +++Y I +
Sbjct: 2159 FMAINLILQDVNDNLPRFQLKNYVAYMREAQGYDLPIIQVVAEDVDQGQNGQVTYSIQSS 2218
Query: 126 NPESYFNIDIGSGSL 140
F ID +GS+
Sbjct: 2219 GMSGLFKIDPVTGSI 2233
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGS------------ 56
++E+Q I+ + A D D R+SY+I AGN F +D GS
Sbjct: 1564 VMEDQPVGFVILYVMARDEDEGEHGRVSYRIQAGNSAGRFRLDADTGSLSILKALDREEQ 1623
Query: 57 ---DLT-----GGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+LT G Q+ ++ +QV +VND P+ + AQ+ ENQ ++++
Sbjct: 1624 DVFNLTIVAEDHGIPQLSRSQVLSVQVIDVNDEAPVFQRAEFEAQVTENQGPGTTVLRVT 1683
Query: 107 ASDGDLDPDQRISY 120
A D D + ++Y
Sbjct: 1684 AVDRDQGSNGHVTY 1697
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y ++ ENQ + + L A+D D + Y+I+AG+P+ F++
Sbjct: 1767 YGLEVPENQEPV-QLCFLKATDPDSGAGGELEYRITAGDPDGDFHLHPSTGALSTSRGLD 1825
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ +D + V +QV +VNDN P+ + Y ++ E+ + +
Sbjct: 1826 RETRAEHILEVVATDRGSPALSTTVTVQVQVMDVNDNSPVFSESSYSLEVSEDAAEGYQV 1885
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++A+D D + ++ Y +S + F +D +G
Sbjct: 1886 LEVSAADADDALNGKVLYFLSH-DAHGAFTVDENTG 1920
>gi|345776762|ref|XP_538324.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Canis
lupus familiaris]
Length = 3106
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y ++ EN ++ + A+DGD + + Y++ G E F ID S +
Sbjct: 462 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AEGVFEIDARSGVVRTRAPVD 520
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 521 REEAAAYQLLVEANDQGRNPGPLSATATVHIVVEDENDNYPQFGEKRYVVQVPEDVAVNT 580
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 581 PVLRVRATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 620
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 568 YVVQVPEDVAVNTPVLRVRATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 627
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 628 FEAVREYTLRIKAQDGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 687
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 688 VLHIQAVDADAGENARLRYRL 708
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 1001 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 1060
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P + V IQV ++NDN P+ + VE S +
Sbjct: 1061 DRENVAVYNLRALAVDRGSPAPLSASVEIQVSVLDINDNPPV-FERDELELFVEENSPVG 1119
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 1120 SVVAKIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 1160
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSDLT-- 59
P Y + EN+ +++L A D D R+SY++ A E YF ID +
Sbjct: 352 PSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAATGAVST 411
Query: 60 ---------------------GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P + YL V V + ND+ P Y ++ EN
Sbjct: 412 ARALDRETKDTHVLKVSALDHGWPRRSAATYLTV--TVSDTNDHSPAFEQSEYRERVREN 469
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+DGD + + Y++ G E F ID SG
Sbjct: 470 LEVGYEVLTIRATDGDAPSNANMRYRLLEG-AEGVFEIDARSG 511
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 777 VSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 834
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 835 NRFALSSQSG 844
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 898 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 957
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I ++ NDN P L Y + E+ ++Q
Sbjct: 958 DQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 1017
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 1018 VSATDRDSGPNGRLLY 1033
>gi|156379565|ref|XP_001631527.1| predicted protein [Nematostella vectensis]
gi|156218569|gb|EDO39464.1| predicted protein [Nematostella vectensis]
Length = 104
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 49 YFNIDIG-SDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
Y+ + + +D P Q++ V+I V ++NDN P V+ A I EN + ++
Sbjct: 12 YYRLTVRVTDSAAYPSQLFNTTTVHITVLDLNDNPPAFDKAVFNASIAENSESGASVTRV 71
Query: 106 AASDGDLDPDQRISYKIS--AGNPESYFNID 134
ASD D D + R++Y ++ A +PE YF +D
Sbjct: 72 TASDRDRDANARLTYSLTYNASSPE-YFRLD 101
>gi|301753497|ref|XP_002912592.1| PREDICTED: protocadherin gamma-B7-like [Ailuropoda melanoleuca]
Length = 810
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + + +VNDN P+
Sbjct: 406 TDGPLDREQTPEYNVTI----------TATDRGEPPLSSSITITLHITDVNDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYMVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|405953984|gb|EKC21537.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1443
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
L G P V +++ +NDN P Y AQ++EN P+V ++A+D DL P
Sbjct: 208 LLGSPKTGTATVLLRITPLNDNRPEFPASGYSAQLMENVPPGTPVVTVSATDNDLGPRSH 267
Query: 118 --ISYKISAGNPESYFNIDIGSG 138
++Y I+ GN ++ F ID SG
Sbjct: 268 GDVTYTITGGNSDTKFYIDPDSG 290
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 8 YAQIVENQSGILPIVQLAA--SDGDLDPDQRISYKISAGNP------------------- 46
++ + E+ + +++A +D DLD + R SY + + P
Sbjct: 851 FSSVTESAPKGTSVTRVSARDADSDLDGNNRFSYSMDSITPFKVHPTTGIVTVDKPLDRE 910
Query: 47 --ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ YF + D P L + I ++++NDN P + Y Q+ E + Q
Sbjct: 911 TEDRYFITVLAIDEGSSPQTGMLTLEISIEDINDNTPQIIGD-YNTQVSEGSPVQTVVFQ 969
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++DGD ++R Y I +GN +S F I+ SG
Sbjct: 970 MSSNDGDSVENKRPYYSIVSGNYDSSFKIEPFSG 1003
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 24/130 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR--ISYKISAGNPESYFNIDIGSDLT----- 59
Y AQ++EN P+V ++A+D DL P ++Y I+ GN ++ F ID S L
Sbjct: 238 YSAQLMENVPPGTPVVTVSATDNDLGPRSHGDVTYTITGGNSDTKFYIDPDSGLISTIAP 297
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG D V I V +VNDN P I E ++ +
Sbjct: 298 LDFETRSSYQLDVQATDGGGDNDVTSVSIDVGDVNDNPPDCSSSPRVVDIEETKTFGTNV 357
Query: 103 VQLAASDGDL 112
+ LA SD D
Sbjct: 358 LNLACSDNDF 367
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR- 117
T G VY+ V++VN+ P + Y +E PI+ L LDPD+
Sbjct: 716 TDGSSTSTATVYVNVKDVNE-APACIQDKYTFTTIEGS----PIMTLVGQVSALDPDKEG 770
Query: 118 ----ISYKISAGNPESYFNIDIGSGSL 140
+ Y I +GN S+F+ID G +
Sbjct: 771 TNGDVQYAIESGNVHSHFSIDPDDGRI 797
>gi|350591205|ref|XP_003483227.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like [Sus
scrofa]
Length = 2864
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 519 YTGLVSEDAPPFTSVLQISATDRDAHVNGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRWL 578
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 579 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 638
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 639 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 677
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y ++ E+Q +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 416 YSVKVNEDQPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 475
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 476 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 535
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 536 ISATDRDAHVNGRVQYTFQNGEDGDGDFTIEPTSG 570
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 314 YHLRLNEDATVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 371
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y ++ E+Q
Sbjct: 372 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVKVNEDQPVGST 429
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 430 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 466
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 639 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 698
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 699 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 756
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 757 DHLFYSFERGNELQLLVVNQTSGEL 781
>gi|341896095|gb|EGT52030.1| hypothetical protein CAEBREN_12407 [Caenorhabditis brenneri]
Length = 4597
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 33/159 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKISAGNPESYFNIDIGSDLT-- 59
P+Y A + EN + IV++ A+D D + +++KI G+P+S+F ID+ S
Sbjct: 1044 PMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLTFKIERGDPQSFFRIDLTSGYITT 1103
Query: 60 ----------------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG Q+ ++V + V + NDN P P+++ +
Sbjct: 1104 SGIRRLDREKQSEHELWVSICDGGEPQLCSNVVVIVNVLDENDNAPSFPQPIHHYNVRAK 1163
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+G L ++ A D D + R++Y I+ G+P F+ID
Sbjct: 1164 VAGKL--CRIFAVDADEGENSRLTYNITEGDPR--FSID 1198
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKIS 123
L V+I+V + ND+ P+ P+Y A + EN + IV++ A+D D + +++KI
Sbjct: 1025 LHVFIRVLDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLTFKIE 1084
Query: 124 AGNPESYFNIDIGSG 138
G+P+S+F ID+ SG
Sbjct: 1085 RGDPQSFFRIDLTSG 1099
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + + NDN P +D +A + EN S + + A D D + ++Y I +GN ES
Sbjct: 1449 VNINDENDNAPYFVDHTAWAFVDENDSVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL 1508
Query: 131 FNIDIGSGSL 140
F ID +G +
Sbjct: 1509 FKIDPQTGEV 1518
>gi|348515191|ref|XP_003445123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Oreochromis niloticus]
Length = 3072
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT------ 59
Y I EN + + A+DGD + + YKI +A S F ID S L
Sbjct: 373 YRVSIRENVEVGFEVKTVRATDGDAPSNADMIYKIVNADEVNSVFEIDPRSGLVRIRERP 432
Query: 60 --------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P VYI V++ NDN P + Y Q+ EN
Sbjct: 433 DRETRAQYQLIVEANDQGKEPSPRSATATVYISVEDENDNYPQFTEKRYVVQVPENVPVN 492
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A+D D + ++ Y I +GN + F I +G
Sbjct: 493 TKVIQVEATDRDEGNNAKVHYSIISGNVKGQFYIHSPTG 531
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY----------------------- 39
L +Y ++E+ ++Q++ASD D + R++Y
Sbjct: 893 LRDIYQGSVLEDAPVYTSVLQISASDRDSASNGRVTYTFQGGDDGDGDFHVEPHSGIVRT 952
Query: 40 --KISAGNPESY----FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
K+ N Y F +D G P + + ++I VQ++NDN P+ + +
Sbjct: 953 ARKLDRENVPVYNLKAFAVDKGVP----PLKAAVSIHIVVQDINDNAPVFEKDELFIDVQ 1008
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
EN + Q+ A+D D + +I Y+I GN F +DI +G L
Sbjct: 1009 ENSPVGSVVAQITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFNGDL 1055
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+ I E++ ++ ++A+D D + R++Y + P+ + D G+ +T
Sbjct: 794 YHVSISEDKPVGSTVITISATDEDTGENARVTYVMEDNVPQFEIDPDTGAIVTKMELDYE 853
Query: 60 -------------GGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
G Q I Y+++ + NDN P L +Y ++E+ ++Q
Sbjct: 854 DQASYTLAITAKDNGIPQKSDITYVEIIISDANDNAPHFLRDIYQGSVLEDAPVYTSVLQ 913
Query: 105 LAASDGDLDPDQRISY 120
++ASD D + R++Y
Sbjct: 914 ISASDRDSASNGRVTY 929
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P + Y +I N+ ++ L + D D + ++Y+IS+GN
Sbjct: 673 VSITVLDVNDNTPTFSEKTYSLKI--NEDAVVGSSVLTVTAVDRDVNSMVTYQISSGNTR 730
Query: 129 SYFNIDIGSG 138
+ F I SG
Sbjct: 731 NRFAITSQSG 740
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-GSDLTGGPDQVY------------- 66
+ Q+ A+D D + +I Y+I GN F +DI DLT D Y
Sbjct: 1017 VAQITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFNGDLTALTDLDYETKTEYIIVVQAT 1076
Query: 67 -------LIVYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V+I++ ++NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1077 SAPLVSRATVHIRLVDMNDNEPVLHNFEILFNNYVTNKSNSFPSGVIGKVPAHDPDV--S 1134
Query: 116 QRISYKISAG 125
++ YK +G
Sbjct: 1135 DKLRYKFESG 1144
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
Y ++EN SG I+Q++A D RI Y + G E+ F ID +
Sbjct: 1457 TYDVTLLENTSGSKEILQVSAVRTD-GRRHRIKYSLLTGRHENLFTIDSKTGWIKIEQSS 1515
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
T GP Y V I++Q+ NDN P Y A + E +
Sbjct: 1516 VNYLDYENFKSIKLTVMAETDGPLFGYCDVIIKLQDENDNAPKFTQEYYTASVWEGNNKG 1575
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++Q++A+D D + + Y I GN ++ F I+
Sbjct: 1576 TYVMQVSATDLDEGSNAHVLYHIVDGNHDNAFVIE 1610
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ + I+VQ+VNDN P+ YY ++E+ I+Q+AA+D D + RI+Y+I
Sbjct: 404 MTLIIEVQDVNDNAPIFERSEYYVNVIESLPINSQILQVAATDQDTGNNARITYRIK 460
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 32/145 (22%)
Query: 11 IVE-NQSGILPIVQLAASDGDL------DPDQRISYK--ISAGNPESYFNIDIGSDLTGG 61
IVE N+ G+ Q+ + GDL D +++ SYK +SAGN +I ++ T
Sbjct: 1911 IVEGNEDGVF---QILSPSGDLVLLKEPDRERKNSYKLLVSAGN-----HIYRSNNAT-- 1960
Query: 62 PDQVYLIVYIQVQNVNDNVP----MTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPD 115
+Y+ + + NDN P + D +Y + E+ ++ L A+D DL P+
Sbjct: 1961 -------IYVTIDDANDNAPIFQGLNSDGIYEVTLSESSPIGTSVITLFANDTDLPGGPN 2013
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++Y I +GN E+ F I+ G++
Sbjct: 2014 TELTYDIISGNDENLFYIESKDGTI 2038
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
+D TG ++ + V +VND+ P Y V + + I ++ ASD D +
Sbjct: 1108 TDETGKRQYDVTLLTVNVLDVNDHAPEFKQGSCYPIHVPENTDLSAIHKVVASDLDEGVN 1167
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
I+Y I++GN + F+IDI SG L
Sbjct: 1168 GEITYSITSGNIGNKFSIDIHSGLL 1192
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNP 127
I++ + NDN P + P + +V + I P + ++ A D D D + R+SY I++GN
Sbjct: 921 IKITDSNDNEPYFISPTTKSILVND--AIEPGSVLAKIIAVDLDSDENGRVSYTITSGND 978
Query: 128 ESYFNIDIGSGSL 140
+ F++D +G L
Sbjct: 979 DGKFSLDHDTGIL 991
>gi|345793791|ref|XP_849393.2| PREDICTED: protocadherin gamma-B3 [Canis lupus familiaris]
Length = 813
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIG-SDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I +D P + + + + +VNDN P+
Sbjct: 406 TDGALDREQ---------TPE--YNVTITVTDRGKPPLSSSISITLHIADVNDNAPVFQQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 455 ASYVVHVAENNPPAASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|359318954|ref|XP_003638957.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B2 [Canis lupus
familiaris]
Length = 820
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y IS + +D P + + + + +VNDN P+
Sbjct: 406 TDGPLDREEIPEYNISV----------MATDRGKPPLSSSISITLHIADVNDNTPVFQQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|390354061|ref|XP_003728251.1| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 186
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V ++NDN P+ PV+ A++ EN + ++ + A D D ++Y++ + +
Sbjct: 69 VFIEVLDINDNAPLPTQPVFRAEVPENSPMGVYVLTVEAVDPDTSSSGNLTYRLKTNSAK 128
Query: 129 SYFNIDIGSG 138
YF ID +G
Sbjct: 129 KYFTIDERTG 138
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 59 TGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
T GPD + Y + +++ +VNDN P+ Y A ++E + +V+L+ASD D +
Sbjct: 2180 TVGPDPLEAYAKLVVRISDVNDNAPIFTQSQYSATVLEGNAKGDFVVKLSASDMDQGLNS 2239
Query: 117 RISYKISAGNPESYFNID 134
R+ Y I GNP++ F I+
Sbjct: 2240 RLLYHIVDGNPDNAFTIN 2257
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + L V + VQ+VNDN P+ Y A + EN + ++++ ASD D +
Sbjct: 198 LDGGSPPLRSRLHVNVTVQDVNDNPPIFKQSRYVASVPENATVGTAVLKVDASDADAGEN 257
Query: 116 QRISYKISA--GNPESYFNIDIGSG 138
RI Y I+ + E F ID +G
Sbjct: 258 GRIEYSINRRQSDREEMFRIDPETG 282
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R Y I G + N GS + P + V I V +VNDN P L+ ++
Sbjct: 2567 LDRETRERYVIRLGAKDE--NSTTGSLVGDDP----VTVIINVDDVNDNYPRFLEELHQV 2620
Query: 91 QIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSGSL 140
I E+ + L A D DL P I Y I++GN + F +D SG++
Sbjct: 2621 SIKEDAPLGHTVAVLRAKDEDLAGSPAASIVYDITSGNDAALFRVDESSGAV 2672
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL-PIVQLAASDGDLDPDQRISYKISAGN 126
IV + + +VNDN P+ +P Y + +S + PI++ ASD D +++Y+IS GN
Sbjct: 634 IVRVLMTDVNDNRPI-FEPREYNVSLRAESPVSGPILRCVASDADAGFFGQVAYRISGGN 692
Query: 127 PESYFNIDIGSGSL 140
+ F ID +G +
Sbjct: 693 EANIFRIDRSTGEI 706
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
I+ L + LD ++R Y++S +D P + + V +VNDN
Sbjct: 391 IIYLVVVERPLDREERPHYELSVE----------ATDAGTPPLRAVRSFRLLVTDVNDNA 440
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P L Y A ++E +++++A D D P+ R+ Y + ++F ID +G
Sbjct: 441 PRFLRDSYEAHLLEASEPGTSVIRVSAEDADEGPNARVRYSLLNS---TWFAIDEDTG 495
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
S L G L + ++VQ+VNDN P+ Y+ ++ E IVQ+ A D D +
Sbjct: 960 SALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVSEGARLNWQIVQVTAVDLDTGNN 1019
Query: 116 QRISYKISAGNPESYFNIDIGSG 138
R+SY++ P F + SG
Sbjct: 1020 ARLSYRLQGSGP---FRVSPNSG 1039
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 29/150 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A ++E +++++A D D P+ R+ Y + ++F ID
Sbjct: 448 YEAHLLEASEPGTSVIRVSAEDADEGPNARVRYSLLNS---TWFAIDEDTGLISTAAHVD 504
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ +D P V + V +VNDN P+ P+Y + E+
Sbjct: 505 CEADPAPLLTVLATDSGKPPLSASATVRVTVHDVNDNEPIFEKPLYNVSLPEDLPPGRCF 564
Query: 103 VQLAASDGDLDPDQRISYKI--SAGNPESY 130
+++ ASD D + ++Y + S+G E +
Sbjct: 565 IKVQASDPDCGVNAMVNYTLAPSSGAAEQF 594
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRI 118
P Y + ++VQ+VNDN P + + A+I EN LP ++ +AA+D D P+ ++
Sbjct: 328 PFSSYERLEVEVQDVNDNAPDFREDPFVAEIAEN----LPPRRVLAVAAADRDSGPNGQL 383
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y I AGN E +F I +G +
Sbjct: 384 DYGIVAGNEEGHFAIHRATGEI 405
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----------TGGPDQV-------- 65
LAA D D + ++Y +SAGN E F ++ + + TG +V
Sbjct: 789 LAARDADPAENGLLAYAVSAGNGEGLFAVNASTGVLTLAGALDYETGRSHEVTVSATDGG 848
Query: 66 ------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ V + V +VNDN P+ Y ++ EN P+V L A+D D P+ ++
Sbjct: 849 WAARTGFCAVTVDVLDVNDNPPVFAGAEYTPEVAENAPSGTPVVTLRATDADSGPNAVVA 908
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + + + F +D +G
Sbjct: 909 YALHEADGD-LFAVDPNTG 926
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y ++ EN P+V L A+D D P+ ++Y + + + F +D + +
Sbjct: 877 YTPEVAENAPSGTPVVTLRATDADSGPNAVVAYALHEADGD-LFAVDPNTGVVSTQGFLD 935
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V ++V VN+ +P + Y ++ E P+
Sbjct: 936 YETRREHRLTVKAFNVPDEERCAFAAVTVRVTGVNEYIPRFVSAAYGFEVSEAAPPGTPV 995
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ A D D PD +SY + + F ++ +G +
Sbjct: 996 GQVFAGDRDRGPDGEVSYLLFGESRRKGFRVERETGQI 1033
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 21 IVQLAASD-GDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI---- 68
++Q+AA+D GD + R+ Y ++ P + F +D + + LTG D+ + +
Sbjct: 680 VIQVAAADDGDFGLNSRVEYLLTGQEPAARFGLDAETGWVSVAAPLTGDVDRTFRLSVTA 739
Query: 69 -------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
V I V N + P ++ E + + LAA D D +
Sbjct: 740 RDGGRPPLSAGATVRILVTEANAHTPEFPRDRVRVEVPETLAVGAVVCVLAARDADPAEN 799
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++Y +SAGN E F ++ +G L
Sbjct: 800 GLLAYAVSAGNGEGLFAVNASTGVL 824
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 24/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP--- 62
++ A I E+ ++ SD D + +SY+++ G + N G +T GP
Sbjct: 46 LFTASISEDAPAGTDVLLANCSDADASSNALVSYQLTGGESQFSINPSTGQIITSGPLDR 105
Query: 63 ----------------DQVYL----IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D + L V + V +VNDN P Y + + L +
Sbjct: 106 ETQANYTLIVVARDGGDPLALSSSATVLVSVADVNDNPPRFQHHPYVTHVPSPAAAGLFV 165
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +D D P+ + + +S + E F ID G++
Sbjct: 166 FAVTVTDPDTGPNSELHFSLSGSHSER-FRIDPTRGAI 202
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P +P Y+ + E + ++AA+D D P+ ++ Y + + P
Sbjct: 538 VAVAVTDVNDNAPRFREPSYFLECPELPEVGSGVARVAATDPDEGPNGQVFYLLKS--PS 595
Query: 129 SYFNIDIGSGSL 140
+F +D +G +
Sbjct: 596 EFFRVDAVTGEI 607
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 33/166 (19%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
+P Y+ + E + ++AA+D D P+ ++ Y + + P +F +D
Sbjct: 554 EPSYFLECPELPEVGSGVARVAATDPDEGPNGQVFYLLKS--PSEFFRVDAVTGEIFNKQ 611
Query: 54 --------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
SD P V + V + ND+ P L Y +
Sbjct: 612 PLRYLNGTGSVHANRHSFVVTCSDRGSPPLLSETTVTVHVVDGNDHPPRFLSAGYSTPVP 671
Query: 94 ENQSGILPIVQLAAS-DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ S ++Q+AA+ DGD + R+ Y ++ P + F +D +G
Sbjct: 672 KDVSVGTRVIQVAAADDGDFGLNSRVEYLLTGQEPAARFGLDAETG 717
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ NDN P ++ A I E+ ++ SD D + +SY+++ G E
Sbjct: 28 VIVTVEDENDNTPTFARSLFTASISEDAPAGTDVLLANCSDADASSNALVSYQLTGG--E 85
Query: 129 SYFNIDIGSGSL 140
S F+I+ +G +
Sbjct: 86 SQFSINPSTGQI 97
>gi|426231061|ref|XP_004023513.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Ovis aries]
Length = 847
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DGDLD +Q Y ++ +D P + + + ++NDN P+
Sbjct: 446 TDGDLDREQTPEYNVTI----------TATDRGKPPLSSSTTITLHITDINDNAPVFHQA 495
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN PI Q++ASD DL P+ +SY I A + + SY +++ SG
Sbjct: 496 SYVVHVPENNPPGAPIAQVSASDPDLGPNGHVSYSIVASDLQPRALSSYVSVNPQSG 552
>gi|344274597|ref|XP_003409101.1| PREDICTED: cadherin-23 [Loxodonta africana]
Length = 3663
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQL 105
+ YF + SDL P + I+ + + ++NDN P+ P Y + EN G +VQ+
Sbjct: 1800 DHYFLKIMASDLGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQV 1859
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D+ + +SY I+ GN + F ID SG +
Sbjct: 1860 RATDRDIGLNSILSYYITEGNEDMTFRIDRISGEI 1894
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F ID I ++T P
Sbjct: 1842 YNVSVNENVGGGTAVVQVRATDRDIGLNSILSYYITEGNEDMTFRIDRISGEITTRPAPP 1901
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1902 DREHKSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQRPHYEVLLDEGPDTINA 1961
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A D D P+ ++Y I +GN + F I+ G
Sbjct: 1962 SLVTIQALDLDEGPNGTVTYAIVSGNIINTFRINRRMG 1999
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDN+P Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 847 GGGEETTGRVRINVLDVNDNMPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 906
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y + A SYF+I G
Sbjct: 907 YSVVDASAFGSYFDISTYEG 926
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 2124 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPLLLNLPMNITISENTPVSSFVAHIL 2183
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 2184 ASDADSGCNALLTFNITAGNRERAFFINATTG 2215
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 35/166 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y + EN+ + +V+L A+D D P+ +I+Y + A SYF+I
Sbjct: 875 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSVVDASAFGSYFDISTYEGYGVISVSR 934
Query: 54 ----------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ D P + V I+V + NDN P P Y+ +VEN
Sbjct: 935 PLDYEQIPNGLIYLTVMARDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 994
Query: 98 GILPIVQLAASDGDLDPD---QRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + + I Y + S F I+ SG +
Sbjct: 995 AGATVLFLNATDLDRSREYGQESIIYSLEGS---SQFRINARSGEI 1037
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 1204 FMAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTAELD 1263
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P +Y + E+ +
Sbjct: 1264 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPALYNVSVSEDVPRDFRV 1323
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1324 VWLNCTDNDMGLNAELSYFITGGNVDGKFSV 1354
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DL 58
+Y + E+ +V L +D D+ + +SY I+ GN + F++ L
Sbjct: 1308 LYNVSVSEDVPRDFRVVWLNCTDNDMGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1367
Query: 59 TGGPDQVYLIVYIQVQ-------------------NVNDNVPMTLDPVYYAQIVENQSGI 99
Y ++ + +VNDN P+ L Y A + E+
Sbjct: 1368 DRETTAAYTLILEAIDNGPVGKRRTGTTTVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1427
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IVQL A+D D + Y+I GN + F I + +G L
Sbjct: 1428 HSIVQLKATDADEGEFGLVWYRILHGNHGNNFRIHVSNGLL 1468
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 49 YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+FN + + G P + I VY+++ ++NDN P+ P Y I E+ I+ ++A
Sbjct: 2676 WFNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDHPSYQEAIFEDVPVGTVILTVSA 2735
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D RI Y + G E F I+ +G +
Sbjct: 2736 TDTDSGNFARIEYSLVDG--EGKFAINPTTGDI 2766
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2804 VVIQVLDVNDCRPQFSKTQFSTSVYENEPAGTSVITMVATDQDEGPNAELAYSLEGPGAE 2863
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2864 A-FHVDMDSG 2872
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2386 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVSNVTIDREE 2445
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P I+ + ++++ND+ P L+P+ ++E+ I +
Sbjct: 2446 QESYRLTVVATDRGTVPLSGTAIISVLIEDINDSRPEFLNPIQTVSVLESAEPGTVIANV 2505
Query: 106 AASDGDLDPDQRISYKI-----------SAGNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 2506 TAIDRDLNP--KLEYHIIGIVAKDDTDHLVPNQEDAFAVNINTGSV 2549
>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
Length = 4252
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS-DLTGG- 61
VY A + E P+++L ASD D ++ +SY + E S+F ID + +++
Sbjct: 2172 VYTALVSEGLPAQTPVIKLLASDKDSGRNKDVSYSMVEDESEDSSFFQIDKSTGEMSTAQ 2231
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P +V + V +VNDN P P Y A + E S
Sbjct: 2232 ELDYETQQQFHVKVRAVDNGIPPLSAEALVIVNVSDVNDNPPAFRQPQYEANVSELASCG 2291
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 2292 HLVIKVQALDPDSGDTTRLEYLILSGNEDRHFIINRTSG 2330
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 24/153 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D DL D I Y + G + F+ID
Sbjct: 1032 VYQGQVEENSLPGTLVLSVTAQDVDLGQDGVIQYFLRDGTDLATFSIDRDTGMIQTIMPL 1091
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P PVYY + E+
Sbjct: 1092 DREFIPHYWLTVLAVDQGSVPLSSVTEVYIEVMDTNDNPPQMSRPVYYPSVKEDAPMNTS 1151
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++QL A D D ++++ I +GN +F I+
Sbjct: 1152 VLQLDAWDPDTVSKGKLTFHIISGNNLGFFVIN 1184
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +QV+++NDN P+ VY A + E P+++L ASD D ++ +SY + E
Sbjct: 2154 VEVQVEDINDNPPIFTQLVYTALVSEGLPAQTPVIKLLASDKDSGRNKDVSYSMVEDESE 2213
Query: 129 --SYFNIDIGSGSL 140
S+F ID +G +
Sbjct: 2214 DSSFFQIDKSTGEM 2227
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ LAA D D + ++ Y ++ GN ES F++++ + L
Sbjct: 730 VAHLAAFDLDAGFNGKLVYVLAGGNEESRFDVELETGLLKVAAPLDHEATSFYILNVTVY 789
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + + + V + NDN P Y +I E+ I QL A D D D +
Sbjct: 790 DLGTPQKSSWKQLAVNVGDENDNTPKFPAGGYQVEIREDTEMGTTIAQLKAEDADKDDNG 849
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + NP F++ +G +
Sbjct: 850 RVCYTLL--NPTDQFSLHALTGEV 871
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 26/131 (19%)
Query: 35 QRISYKISAGNPESYFNIDIGS---------DLTGGPDQVYL----------------IV 69
++ Y+I +GN + F +D + D G + YL IV
Sbjct: 3146 EKTGYQIVSGNEQEKFRLDYHTGILYVNGSLDFETG-QEYYLSIECIRKSSPSLNDGTIV 3204
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+ + +VND+ P L +Y ++ E+ + I+ ++A+DGD + I+Y + AG+
Sbjct: 3205 VVNITDVNDHPPKFLQDLYSVEVKEDAAVGESILTVSATDGDGPLNSAITYSLVAGDRLG 3264
Query: 130 YFNIDIGSGSL 140
+F I G L
Sbjct: 3265 HFTIHPKKGEL 3275
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 30/158 (18%)
Query: 6 VYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSD 57
++Y N + + ++Q+ A D D + ++ Y + AGN ES+FNID +
Sbjct: 1454 LHYETTTSNTASLGTELLQVRALDVDRGFNGQVQYSLQAGNSESFFNIDPHLGIITVAQK 1513
Query: 58 LTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
L P Y++ V I + + + P+ Y+A+I E+ +
Sbjct: 1514 LDLMPQDQYMLTVRAEDQGSPPLHDMATVTIHIHPSDYSAPVFSMAEYFAEIPESVAIGS 1573
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P++ ++A ++Y++ GN + F+I+ SG
Sbjct: 1574 PLLLVSAVS-----TSEVTYEMREGNKDGVFSINSYSG 1606
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V + +Q+VNDN P T P YY A I E+Q P+ + A+D D D R+ Y
Sbjct: 776 PKSASTSVVVTIQDVNDNDP-TFSPKYYEATIAEDQPPGTPVTTVTATDP--DEDSRLHY 832
Query: 121 KISAGNPESYFNIDIGSG 138
+I+AGN F+I +G
Sbjct: 833 EITAGNTRGRFSITSQNG 850
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P P+Y A I E+ +VQ+AA+D D+ + RI Y +S+ + E
Sbjct: 996 VEISVTDVNDNAPQFKVPLYQATIAEDALIGTSVVQIAATDIDMGLNGRIKYTLSSKDIE 1055
Query: 129 -SYFNIDIGSG 138
F +D SG
Sbjct: 1056 DGSFVVDPTSG 1066
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN--------- 51
T P YY A I E+Q P+ + A+D D D R+ Y+I+AGN F+
Sbjct: 796 TFSPKYYEATIAEDQPPGTPVTTVTATDPD--EDSRLHYEITAGNTRGRFSITSQNGRGL 853
Query: 52 IDIGSDLTGGPDQVY---------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I I L ++ + IV I + + N+ P+ + Y A + E+
Sbjct: 854 ITIAQPLDYKQERRFALTITATDSGQRTDTAIVNINITDANNFAPVFENAPYTASVFEDA 913
Query: 97 SGILPIVQLAASDGDLDPDQRISY 120
++ + A+D D+ + +I+Y
Sbjct: 914 PVGTTVLVVFATDSDVGVNAQITY 937
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVE----NQSGILPIVQLAASDGDLDPDQRISYKISA 124
V +++ + NDN P + Y Q+ E N++ + I + A+D D + I Y I
Sbjct: 571 VIVKILDDNDNYPQFSERTYTVQVSEDQWTNENNV--ITHIQATDADQGNNAAIRYAIIG 628
Query: 125 GNPESYFNIDIGSG 138
GN +S F+ID SG
Sbjct: 629 GNTQSQFSIDSMSG 642
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLVLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D+ P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENMALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + I+Y I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ITYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F +D +G++
Sbjct: 2200 QEFRLDSVTGAI 2211
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S ++ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSP-RKVLTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------ 56
A I E+ S + ++A D D + I Y IS+GN E F I+ +
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 57 -----DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++T GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIEAVDSGTVSLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 23/153 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD--LTGGP-- 62
Y + EN + ++ +AA D D+ + + Y I +GN E F I+ S +T P
Sbjct: 1417 YIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLD 1476
Query: 63 --------------DQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
D Y V I+V N+ND P Y A + EN +V++
Sbjct: 1477 FEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKV 1536
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+AS D D +SY I G F+ID SG
Sbjct: 1537 SAS--DRDSFGSLSYSIVGGKDSDKFSIDQRSG 1567
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y + EN + + + + A+D D + +ISY I +GN F +D
Sbjct: 689 LYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPL 748
Query: 54 ----IGS-DLTGGPDQVYLIVYIQVQNVN-------DNVPMTLDPVYYAQIVENQSGILP 101
I S LT D L+ ++ VN DN P P + I E+
Sbjct: 749 DRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRF-NISEDSPTGTR 807
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ QL A+D D+ P+ ++Y I +GN + F +D SG L
Sbjct: 808 VGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGIL 846
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 33/161 (20%)
Query: 7 YYAQIVENQ-SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
Y +++ EN +G Q++A+D D + + + I GN + F ID +
Sbjct: 381 YQSRVKENTPAG----TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSP 436
Query: 57 --------DLT------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
DLT G P D + ++I+ +VND+ P+ Y QI E+
Sbjct: 437 DYENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSPVFSPSNYSKQIPESTVIG 494
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A+D D P R+ Y++ +GN + FNID SGS+
Sbjct: 495 STVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSI 535
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 30/165 (18%)
Query: 3 LDPVYYAQIVENQSGILPI----VQLAASDGDLDPDQRISYKISAGNPESY--------- 49
+P YA+ + LPI ++ A+D D + +++Y++S G+ +
Sbjct: 1099 FNPGSYAKSLHEN---LPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLV 1155
Query: 50 -------------FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+++ + + G P Q + + + + ++NDN P Y + EN
Sbjct: 1156 TTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTEN 1215
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+++ ASD D + R++Y I +GN + F ID +G +
Sbjct: 1216 TANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRI 1260
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 60 GGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P + L +V + V +VNDN P +Y + EN + + + + A+D D + +I
Sbjct: 661 GTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKI 720
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
SY I +GN F +D +G +
Sbjct: 721 SYSILSGNENMAFAMDRFTGEI 742
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 27/156 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y QI E+ +V + A+D D P R+ Y++ +GN + FNID + S+L
Sbjct: 483 YSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELD 542
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I +Q++NDN P+ P Y ++ E+ S I
Sbjct: 543 RETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-YVFRVSESSSPGHQI 601
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q+AA+D D + + Y +S + F+I+ +G
Sbjct: 602 GQVAATDADDSSNGDVRYALS--DNTDVFSINTSTG 635
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + NVNDNVP + P I E+ + +V+L A+D D P +++ I GN
Sbjct: 983 VKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTP---LTFDIVEGNAG 1039
Query: 129 SYFNIDIGSG 138
S F ID SG
Sbjct: 1040 SSFKIDQSSG 1049
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--------------------ESYF 50
I+EN + +LAA+D D + RI+Y +S + +S +
Sbjct: 1626 ILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTY 1685
Query: 51 NIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ I + G P Q I + + V ++ND+ P+ + ENQ ++++ ASD
Sbjct: 1686 DLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASD 1745
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D + +++ + + +S F +D +G +
Sbjct: 1746 ADTGLNAELTFSLLSNEHKSVFTLDNTTGDI 1776
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------IGSDL 58
+ QL A D D+ + R+SY + +G+ SYF +D + +
Sbjct: 187 VRQLTAVDLDVGINARLSYSLVSGDT-SYFTVDSQGVIRTKGAFDRETKASYQVALRAQD 245
Query: 59 TGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + V I++ +VNDN P+ Y A + E+ + +V + ASD D +
Sbjct: 246 GGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNAD 305
Query: 118 ISYKISAGNPESYFNIDIGSG 138
+ Y ++GN F +D +G
Sbjct: 306 LRYSFTSGNTNHAFTLDAVTG 326
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 36/164 (21%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+ P I E+ + +V+L A+D D P +++ I GN S F ID S L
Sbjct: 998 VSPAQVTSIPEDVAINTHVVKLNATDSDGTP---LTFDIVEGNAGSSFKIDQSSGLISVA 1054
Query: 59 -------------------TGGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
TG + VY I+V +VNDN P+ +P YA+ +
Sbjct: 1055 KRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPV-FNPGSYAKSLHEN-- 1111
Query: 99 ILPI----VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
LPI ++ A+D D + +++Y++S G+ S F ++ +G
Sbjct: 1112 -LPIGQTVAKVTATDRDEGENAKVTYELSVGDT-SKFEVNPATG 1153
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ Y + EN + ++ +AA D D+ + + Y I +GN E
Sbjct: 1400 VVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKR 1459
Query: 131 FNIDIGSG 138
F I+ SG
Sbjct: 1460 FKINSTSG 1467
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 25/136 (18%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSDLT 59
QL A+D D+ P+ ++Y I +GN + F +D + +
Sbjct: 810 QLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDA 869
Query: 60 GGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P Q + +++ V +VNDN P ++ +I E+ S ++Q+ D D + I
Sbjct: 870 GSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAI 929
Query: 119 SYKISAGNPESYFNID 134
+ +S G F ID
Sbjct: 930 TLSLS-GEGSDNFTID 944
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 26/149 (17%)
Query: 7 YYAQIVENQSGILPIVQLA---ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP- 62
Y I EN P Q+A A+D D + I+Y + +G + N G T P
Sbjct: 75 YVFNIREN----TPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPL 130
Query: 63 -----------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ I V +VNDN P VY + E+ + + QL
Sbjct: 131 DHETKDSYTMRISAFDGKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQL 190
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNID 134
A D D+ + R+SY + +G+ SYF +D
Sbjct: 191 TAVDLDVGINARLSYSLVSGDT-SYFTVD 218
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD--- 63
Y A + EN +V+++ASD D +SY I G F+ID S + D
Sbjct: 1519 YTASVRENSPTSTSVVKVSASD--RDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLD 1576
Query: 64 ----QVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+Y I V I++ + NDN P Y + I+EN +
Sbjct: 1577 RELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFS 1636
Query: 103 VQLAASDGDLDPDQRISYKIS 123
+LAA+D D + RI+Y +S
Sbjct: 1637 FKLAATDADEGTNARITYNLS 1657
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 33/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + E+ + +V + ASD D + + Y ++GN F +D
Sbjct: 276 YTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLD 335
Query: 54 --------IGSDLT--GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ-SGI 99
+G +T G P D +L+ I V ++NDN P+ Y +++ EN +G
Sbjct: 336 FEQRSSYALGLSVTDRGSPPLTDTSHLL--INVNDINDNPPVFSPSAYQSRVKENTPAG- 392
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q++A+D D + + + I GN + F ID +G
Sbjct: 393 ---TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTG 428
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLVLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +D+ P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSLG 141
F ID SG +
Sbjct: 1256 RQFAIDSTSGQVA 1268
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2158 LYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P + V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DREKTPTYLLTVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + ++SY + GN ++ F + SG L
Sbjct: 2277 RTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLS-ASGEL 2316
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D + R++ ++ +Y + +D P V + V ++NDN P+ +Y
Sbjct: 2100 GTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSAEVVVMVLDINDNNPIFAQALY 2159
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+I EN I+Q+ A+DGD + ++ Y I GN F ID +G++
Sbjct: 2160 KVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAI 2211
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + I+Y I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ITYLITTGDQKGMFAINQVTGQL 848
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQ-LAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+ + + GI IV+ ++A D D + I Y IS+GN E F I+ +
Sbjct: 3093 HMSATIPESHGIGSIVRTVSARDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKAL 3152
Query: 57 --------DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++T GG Y V + V +VNDN P+ L Y+ ++EN
Sbjct: 3153 DYELCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTT 3212
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L A+D D + I+Y + + + + F ID +G
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S ++ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSP-RKVLTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F I+ +G +
Sbjct: 2707 IVNGNMENSFTINHATGEI 2725
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPTYSLVIEAVDSGTISLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V +Q++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 29/155 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGS---DLTGG 61
+Y QI E + ++A D D P R SY I +GN F+I+ + +T
Sbjct: 3408 IYSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGKITVTAE 3467
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ L VY + ++++NDN PM V +++EN+
Sbjct: 3468 LDRETLPVYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLT--VSEGEVMENKRPGT 3525
Query: 101 PIVQLAASDGDLDPDQ--RISYKISAGNPESYFNI 133
++ L ++D DL P+Q Y +S G +YF++
Sbjct: 3526 LVITLQSTDPDLPPNQGPFTYYLLSTGPATNYFSL 3560
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V + +Q+VNDN P T P YY A I E+Q P+ + A+D D D R+ Y
Sbjct: 776 PKSASTSVVVTIQDVNDNDP-TFSPKYYEATIAEDQPPGTPVTTVTATDP--DEDSRLHY 832
Query: 121 KISAGNPESYFNIDIGSG 138
+I+AGN F+I +G
Sbjct: 833 EITAGNTRGRFSITSQNG 850
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P P+Y A I E+ +VQ+AA+D D+ + RI Y +S+ + E
Sbjct: 996 VEISVTDVNDNAPQFKVPLYQATIAEDALIGTSVVQIAATDIDMGLNGRIKYTLSSKDIE 1055
Query: 129 -SYFNIDIGSG 138
F +D SG
Sbjct: 1056 DGSFVVDPTSG 1066
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN--------- 51
T P YY A I E+Q P+ + A+D D D R+ Y+I+AGN F+
Sbjct: 796 TFSPKYYEATIAEDQPPGTPVTTVTATDPD--EDSRLHYEITAGNTRGRFSITSQNGRGL 853
Query: 52 IDIGSDLTGGPDQVY---------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I I L ++ + IV I + + N+ P+ + Y A + E+
Sbjct: 854 ITIAQPLDYKQERRFALTITATDSGQRTDTAIVNINITDANNFAPVFENAPYTASVFEDA 913
Query: 97 SGILPIVQLAASDGDLDPDQRISY 120
++ + A+D D+ + +I+Y
Sbjct: 914 PVGTTVLVVFATDSDVGVNAQITY 937
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVE----NQSGILPIVQLAASDGDLDPDQRISYKISA 124
V +++ + NDN P + Y Q+ E N++ + I + A+D D + I Y I
Sbjct: 571 VIVKILDDNDNYPQFSERTYTVQVSEDQWTNENNV--ITHIQATDADQGNNAAIRYAIIG 628
Query: 125 GNPESYFNIDIGSG 138
GN +S F+ID SG
Sbjct: 629 GNTQSQFSIDSMSG 642
>gi|301753493|ref|XP_002912634.1| PREDICTED: protocadherin gamma-B1-like [Ailuropoda melanoleuca]
Length = 808
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ SY ++ +D P + + + +VNDN P+
Sbjct: 405 TDGSLDREKTPSYNVTI----------TATDRGKPPLSSSSSITLHIADVNDNTPVFEQA 454
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y I EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 455 FYLVHIAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 511
>gi|196006169|ref|XP_002112951.1| hypothetical protein TRIADDRAFT_25152 [Trichoplax adhaerens]
gi|190584992|gb|EDV25061.1| hypothetical protein TRIADDRAFT_25152, partial [Trichoplax
adhaerens]
Length = 2391
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLTGGP-- 62
Y IVEN IVQ+ ASD D+ I Y I GNP + F N G T GP
Sbjct: 755 YPVSIVENVEIGTLIVQVQASDKDIGKSGSIVYAILDGNPNNAFIINATTGRITTHGPLD 814
Query: 63 --------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ V + V +V+DN+P I EN I
Sbjct: 815 AEKRQYYRLNVTATDEGATAKMDWCTVQVNVTDVDDNIPTFTKQEITIAIKENIPLNTTI 874
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V + A+D D+ +ISY I +GN + F ID +G +
Sbjct: 875 VTVKATDADVSA-SKISYLIQSGNVGNTFMIDRENGKI 911
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 47 ESYFNID-IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+S FN+ I D P V I V VN+ +P+ Y IVEN IVQ+
Sbjct: 713 QSIFNLTVIARDQGITPRNATTEVIINVGEVNNYLPVFAKHNYPVSIVENVEIGTLIVQV 772
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D+ I Y I GNP + F I+ +G +
Sbjct: 773 QASDKDIGKSGSIVYAILDGNPNNAFIINATTGRI 807
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
YL + I + +VNDN P Y+ I E+ + I + A+D D + I Y+I AG
Sbjct: 1684 YLTLQINLTDVNDNRPRFKHEYYHLTIDESTRAGMAIYPIVATDRDSNEFALIRYEIVAG 1743
Query: 126 NPESYFNIDIGSGSL 140
N F I SG L
Sbjct: 1744 NLGQTFGISERSGQL 1758
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSDLT---- 59
P Y A + E P+V + A+D D + RI Y I + Y N G+ T
Sbjct: 1909 PTYEATLQEFSPPHQPVVTVHATDQDSGDNSRIVYSIEITSTNQFYINSTTGTIYTDRTI 1968
Query: 60 ------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + L+ V IQ+ +VND P+ Y + EN
Sbjct: 1969 EYNPNMPIIQLVITARDNGFPQLIALVPVRIQITDVNDKAPVFDKNKYIQHVPENVPIGT 2028
Query: 101 PIVQLAASDGDLDPDQR---ISYKISAGNPESYFNIDIGSG 138
I+Q+ A+ DLD +R I+Y I +GN F ++ SG
Sbjct: 2029 EILQVHAT--DLDRSRRNSIITYSIISGNNYGLFEMNNISG 2067
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V + NDN P + + + E++S I Q+ A D D + I Y I G+ E
Sbjct: 1059 VVIWVADQNDNAPRFIGTSHIQAVNEDESVGTTIAQIIAVDDDSRQNNNIEYHIVEGDNE 1118
Query: 129 SYFNIDIGSGSLG 141
F +D+ +G L
Sbjct: 1119 GKFALDVDNGVLS 1131
>gi|395734833|ref|XP_002814700.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Pongo abelii]
Length = 1345
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G D +QR SY+++ + + +D P I+ + + +VNDN P VY
Sbjct: 347 GGADREQRDSYELT---------LAVAADGGDPPRSSQAILRVLITDVNDNSPRFEKSVY 397
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y G P+S +D SG L
Sbjct: 398 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFRGGPPKSVRRLLRLDETSGWL 452
>gi|156368057|ref|XP_001627513.1| predicted protein [Nematostella vectensis]
gi|156214425|gb|EDO35413.1| predicted protein [Nematostella vectensis]
Length = 1781
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG----------------------SDL 58
++ + A+D D + ISY I AGN + YF I + S
Sbjct: 653 LLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYVSKPLDYEHQENYSLNVSAT 712
Query: 59 TGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GILPIVQLAASDGDLDPD 115
GG P Y V I +++VNDN P+ Y ++ EN + + + + A+D D
Sbjct: 713 DGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAENTTPRSVVVCSVRATDRDERGQ 772
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
Q + Y I G+ + F ID +G +
Sbjct: 773 QSVRYSILGGSGKDKFVIDERTGEI 797
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I VQ+VNDN P+ + I EN ++ + A+D D + ++SY G+
Sbjct: 1 VTITVQDVNDNAPVFTSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSHG 60
Query: 129 SYFNIDIGSGSL 140
+ F ID SG +
Sbjct: 61 NKFAIDASSGRI 72
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 36/169 (21%)
Query: 5 PVYYAQIV-----ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------ 53
PV+ + I EN S I+ L A DGD + I Y GN + F I+
Sbjct: 221 PVFLSHIGTVFIDENASPGTEIITLQAVDGDSGVNAEIRYAFVTGNSNNSFTINSITGRL 280
Query: 54 ------------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVE 94
+ DL G P + + V + +++VNDN P+ Y A++ E
Sbjct: 281 RTARNLDRETTPRFTLEVLAYDL-GVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEVSE 339
Query: 95 NQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
G++ IV + A D D+ D ++Y I+ G F I+ +G++G
Sbjct: 340 ---GVVESNIVTVVAEDRDIGSDGSVTYCITQGREGGLFVINENTGTIG 385
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDG-DLDPDQRISYKISAGNPESYFNID-------I 54
+ VY V++ + I ++ A D D P+ + Y+ +GN F + I
Sbjct: 529 IKSVYLLFAVQDAGSGVSIGRVEAVDKFDYGPNALVRYEAISGNGTGRFRVAPETGEVLI 588
Query: 55 GSDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
S L ++ Y I VY++V N + P+ VY E+ +
Sbjct: 589 ASSLRDDVNKTYYIRVRASDMGQPKMSDTAGVYVEVTERNLHPPVFSKAVYQTSENEDIA 648
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+D D + ISY I AGN + YF I + +GSL
Sbjct: 649 VGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSL 691
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------- 49
Y I E+ + I ++ASD D+ + R++Y I + ++
Sbjct: 125 YVFDIAEDAAVGASIGTVSASDADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDR 184
Query: 50 ----FNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++I + +DL P + + + V + ND+ P+ L + I EN S I+
Sbjct: 185 EGANYSIRVTATDLGTPPLSASMEITVIVDDYNDHRPVFLSHIGTVFIDENASPGTEIIT 244
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A DGD + I Y GN + F I+ +G L
Sbjct: 245 LQAVDGDSGVNAEIRYAFVTGNSNNSFTINSITGRL 280
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I + VN+ +P+ + V+ A + EN +++++A+D D PD + Y + + +
Sbjct: 834 VHILITGVNEFLPVFVQSVFTATVAENAPIGHSVLRVSATDKDKGPDGVVLYHLLGSDNQ 893
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 894 QGFDLDSNTGTL 905
>gi|410975450|ref|XP_004001382.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23, partial [Felis catus]
Length = 1169
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 489 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 548
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 549 YSIVNASAFGSYFDISVYEG 568
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 517 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 576
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V ++V + NDN P P Y+ +VEN
Sbjct: 577 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTVEVFDENDNPPTFSKPAYFVSVVENIM 636
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 637 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 679
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY+I G P F I+ S + T D
Sbjct: 846 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRIQVGMPRMDFLINSSSGVVVTTAELD 905
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P Y + E+ +
Sbjct: 906 RERIAEYQLRVVASDAGTPTKSSTGTLTVRVLDVNDETPTFFPATYNVSVSEDVPREFRV 965
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
L +D D+ + +SY I+ GN + F++
Sbjct: 966 AWLNCTDNDVGLNAELSYFITGGNVDGKFSV 996
>gi|440911891|gb|ELR61516.1| Cadherin-23, partial [Bos grunniens mutus]
Length = 3319
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 493 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 552
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 553 YSIVNASAFGSYFDISVYEG 572
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 36/171 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 954 VYNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNL 1013
Query: 53 DIGSDLT-------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ-------- 91
D + T G V++ V +VNDN P+ L Y A
Sbjct: 1014 DRETTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSEDIPEG 1073
Query: 92 --IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV+ + L + QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1074 HSIVQAVTTCLILPQLKATDADEGEFGRVWYRIVHGNHGNNFRIHVSNGLL 1124
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1497 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITGGNEDMTFRMDRVSGEIATRPAPP 1556
Query: 63 DQ-----VYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+V Y+ + + NDN P+ P Y + E I
Sbjct: 1557 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINT 1616
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN S F I+ +G
Sbjct: 1617 SLITIRALDLDEGPNGTVTYAIVAGNIISTFRINRHTG 1654
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1462 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1521
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1522 GINSVLSYYITGGNEDMTFRMDRVSGEIA 1550
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + ++
Sbjct: 1779 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPISSFVARIL 1838
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1839 ASDADSGCNALLTFNITAGNRERAFSINATTG 1870
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 521 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 580
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 581 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVSVTIEVFDENDNPPTFSKPAYFVSVVENIM 640
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 641 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 683
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 850 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGVVVTTAELD 909
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 910 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 969
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 970 VWLNCTDSDVGLNAELSYFITGGNVDGKFSV 1000
>gi|32810968|gb|AAP87554.1| cadherin-like protein cad2 [Aplysia californica]
Length = 736
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + + V +VNDN P YYA I E+ + PI+ + A+ D+ + I+Y I+AGN
Sbjct: 581 LTIMVTVLDVNDNPPEFQHSSYYATIQESANVGTPIIXITATSLDIGXNADITYSIAAGN 640
Query: 127 PESYFNIDIGSGSL 140
+ F+ID G L
Sbjct: 641 EQGKFSIDPNKGVL 654
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 31/133 (23%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
YYA I E+ + PI+ + A+ D+ + I+Y I+AGN + F+ID
Sbjct: 602 YYATIQESANVGTPIIXITATSLDIGXNADITYSIAAGNEQGKFSIDPNKGVLVVTEPLD 661
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPM----TLDPVYYAQIVENQSG 98
+ +D P IV I + +VNDN P L PV+ V +
Sbjct: 662 HELAREYFITVLATDRGTPPLTDTAIVSINITDVNDNPPRFSQDALPPVHVKXNVHEGTX 721
Query: 99 ILPIVQLAASDGD 111
I ++ A+D D
Sbjct: 722 IFKVM---ATDXD 731
>gi|347543899|gb|AEP02522.1| CDH23, partial [Miniopterus schreibersii]
Length = 3274
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 528 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 587
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 588 YSIVNASCFGSYFDISVYEG 607
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY I+ GN + F N+
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVNL 1048
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1049 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1103
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D + Y+I GN F+I + G L
Sbjct: 1104 DIPEGHSIVQLMATDADEGEFGLVWYRILNGNDGKNFHIHVSDGLL 1149
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I +++ P
Sbjct: 1523 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNDDVTFRMDRISGEISTRPAPP 1582
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P P Y + E +
Sbjct: 1583 DRERQSFYHLVVTVEDEGTPPLSATTHVYVTIVDENDNAPAFQQPHYEILLDEGPDTVNA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A D D P+ ++Y I AGN F ID +G
Sbjct: 1643 SLVTVQAQDPDEGPNGTVTYAIIAGNIIDTFRIDRHTG 1680
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1488 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D SG +
Sbjct: 1548 GINSVLSYYITEGNDDVTFRMDRISGEI 1575
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1805 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHIL 1864
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ SG
Sbjct: 1865 ASDADSGCNALLTFNITAGNRERAFSINATSG 1896
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + + Q+ A D D + +SY++ G P F I+
Sbjct: 885 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSTGVVVTTTELD 944
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ +D + I+V +VND P VY + E+ +
Sbjct: 945 RERIAQYQLRVVATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1005 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1035
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 556 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASCFGSYFDISVYEGYAVISVSR 615
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VE+
Sbjct: 616 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVESIM 675
Query: 98 GILPIVQLAASDGD 111
++ L A+D D
Sbjct: 676 AGATVLFLNATDLD 689
>gi|73949399|ref|XP_849349.1| PREDICTED: protocadherin gamma-B1 [Canis lupus familiaris]
Length = 818
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I + G P V++ + +VNDN P+ Y + EN I Q++AS
Sbjct: 416 YNVTITATDKGKPSLSSSKSVFLHITDVNDNAPVFQQASYVVHVAENNPPGASIAQVSAS 475
Query: 109 DGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
D DL P+ R+SY I A + E SY ++ SG
Sbjct: 476 DPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 510
>gi|326435630|gb|EGD81200.1| tyrosine phosphatase [Salpingoeca sp. ATCC 50818]
Length = 8158
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 38/157 (24%)
Query: 21 IVQLAASDGDLD-PDQRISYKISAGNPESY-FNIDI------------GSDL------TG 60
+V L A+DGD P+ + + ++A S+ F +D G D+ T
Sbjct: 4873 VVTLTATDGDATAPNNDVRFGLAANETWSHAFEVDAVTGAVRVATGDAGGDVQWFDHETA 4932
Query: 61 GPDQVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
V ++VY + + +VNDNVP Y +VE QS PIV
Sbjct: 4933 AEVAVTVLVYDMAADVADRLTTTAQLVVAITDVNDNVPQFTPREYVVTVVETQSTTEPIV 4992
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L D D + ++ ++I+ GN S ID SG+L
Sbjct: 4993 ALVVEDADQGVNAQVEFEIAGGNMNSAVRID-ASGTL 5028
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
++V L V I V +VNDN P Y A ++EN + +V++AA D D D Q + + +
Sbjct: 3283 NRVALTVRITVDDVNDNAPAFSQTAYAASVLENAAVDTAVVRVAAQDADEDGTQAVRFSL 3342
Query: 123 SAGNPESYFNIDIGSGSL 140
+ E F ID +G +
Sbjct: 3343 ATHASE--FAIDAETGQI 3358
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPI-VQLAASDGDL 112
+D++ P + V + V ++NDN P+ + + IV E+ + PI VQ+AA D DL
Sbjct: 2480 AADVSATPLVTSVTVTLHVLDINDNAPVYAHGDFTSVIVLEDAAPGTPIGVQVAARDADL 2539
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
+ ++Y I AGN S F +D +G
Sbjct: 2540 GGNGTVAYAIVAGNTNSDFAVDPTTG 2565
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGN 126
V++ V +VNDN P + Y A + EN +G+ ++ LAA+D D P Q +++ ++ G
Sbjct: 5639 VHVIVDDVNDNAPAFVQGGYSATVAENTAGV-DLITLAATDADRPATPTQ-LTFSLAQGE 5696
Query: 127 PESYFNIDIGSG 138
+F +D SG
Sbjct: 5697 WSQHFVVDPVSG 5708
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 36/163 (22%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPD-----QRISYKISAGNPESYFNIDIGSDL--TGG 61
AQ+V LP ++AA+ D D R+SY I GN F ID + + T G
Sbjct: 2622 AQVVAEN---LPAGKVAAAPFATDADITAGFNRVSYSIVGGNAAGLFAIDAATGVVRTTG 2678
Query: 62 P-----DQVYLIVYIQVQN-----------------VNDNVPMTLDPVYYAQIVENQSGI 99
P D Y + N VNDN P+ YYA V +
Sbjct: 2679 PLDRETDAAYNLTVQAADNGEPPLTATVAVPVVVGDVNDNAPVFTSNAYYAWSVSEDAAP 2738
Query: 100 LPIV-QLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
++ +AASD D + R++Y I+A P F++D +G +
Sbjct: 2739 NTLLGTVAASDADAGANARVTYSLINATAP--LFSVDATTGEV 2779
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P +V + +Q++ND P+ L Y A + E S P+V+++ASD D + I Y
Sbjct: 6597 PMTTTAVVVVDIQDINDRDPVFLADTYVATVSEAASVGTPVVRVSASDADAS-NVAIRYA 6655
Query: 122 ISAGNPESYFNIDIGSG 138
+ G S F+ID SG
Sbjct: 6656 LDDGGL-SPFDIDEASG 6671
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 31/144 (21%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP------DQVYLIVYIQ------- 72
A D D ++ Y + GN F ++ G+ T G D L+V +
Sbjct: 5102 AQDPDTGAGGQVEYLLVGGNAAGKFKLEGGTLFTAGRLDREVVDTYALVVRARDLGTEQQ 5161
Query: 73 ----------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK- 121
V + NDN P+ + Y A ++E+ + +V++ A+D DL + RI+Y
Sbjct: 5162 LFTDVTITVTVTDENDNAPVFDEEAYTASVLESAALGAQVVRVRATDADLADNARITYTL 5221
Query: 122 ISAGNPESY-------FNIDIGSG 138
+ AG S F ID SG
Sbjct: 5222 LGAGTTNSTGSAVVGAFEIDASSG 5245
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR--I 118
G + V ++V +VNDN P+ Y A I+EN + ++ ASD DL + I
Sbjct: 4043 GGRRAVATVLVRVVDVNDNAPVFERERYEATIIENFNFGSTVLTARASDRDLGANGTAGI 4102
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y I G S F ID +G
Sbjct: 4103 VYSIRDGAGSSNFAIDSATG 4122
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 35/159 (22%)
Query: 11 IVENQSGILPI-VQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL---- 58
++E+ + PI VQ+AA D DL + ++Y I AGN S F +D + L
Sbjct: 2518 VLEDAAPGTPIGVQVAARDADLGGNGTVAYAIVAGNTNSDFAVDPTTGVVSVARRLDFES 2577
Query: 59 --------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
T P ++V + + + ND P+ V + EN LP +
Sbjct: 2578 VVSYTLTMRASDQGTPQPKTADVLVVVSLVDANDEAPVFNADVGAQVVAEN----LPAGK 2633
Query: 105 LAASDGDLDPD-----QRISYKISAGNPESYFNIDIGSG 138
+AA+ D D R+SY I GN F ID +G
Sbjct: 2634 VAAAPFATDADITAGFNRVSYSIVGGNAAGLFAIDAATG 2672
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 25/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y +VE QS PIV L D D + ++ ++I+ GN S ID L
Sbjct: 4977 YVVTVVETQSTTEPIVALVVEDADQGVNAQVEFEIAGGNMNSAVRIDASGTLYPNNLDFE 5036
Query: 59 -----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G V I + + ND P + Y ++ E
Sbjct: 5037 TAPILNIIVLASNPAGALGAQPSAVATVLITLTDDNDEHPAFVGAPYAFEVSEGAEVDTR 5096
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
I + A D D ++ Y + GN F ++ G+
Sbjct: 5097 IGSVLAQDPDTGAGGQVEYLLVGGNAAGKFKLEGGT 5132
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 7 YYAQIVENQSGILPIV-QLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGS---DLTGG 61
YYA V + ++ +AASD D + R++Y I+A P F++D + LTGG
Sbjct: 2727 YYAWSVSEDAAPNTLLGTVAASDADAGANARVTYSLINATAP--LFSVDATTGEVRLTGG 2784
Query: 62 ---------------------PDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P Q+ + + V +VNDN P+ +D + EN +
Sbjct: 2785 QLDRETAETHTLVVRARDSGAPVQLSTDATIVLTVLDVNDNAPVFVDLPMQVSVFENATT 2844
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+++++++D D+ + ++ Y + A N S
Sbjct: 2845 ADVVLRVSSTDEDVGTNAQVEYTLRAANEVS 2875
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + ++NDN P+ Y A I E + G++ + + A+D D + R+ Y++ + +
Sbjct: 1313 VTIADINDNTPVFEFAQYNATIAEGEQGVV-VATVTATDADAGDNARVQYELDVAS-RAL 1370
Query: 131 FNIDIGSG 138
F ID +G
Sbjct: 1371 FAIDAATG 1378
>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
Length = 2923
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 32/168 (19%)
Query: 5 PVYYAQIVENQSGILP-------IVQLAASDGDLDPDQRISYKISAGNPESY-FNID--- 53
P + +I E S I+ + +L+A D D P+ I++K+ G P+ + F +D
Sbjct: 543 PRFAKRIFERTSDIMEDIKVGSFVYKLSARDRDSGPNGDITFKLEDGLPQDFPFELDPKS 602
Query: 54 ---------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
I D P + V + NVNDN P YY +I
Sbjct: 603 GEITVSKGLDYETTKSYKFGVIAVDNGHPPKKDTTQVVFNIGNVNDNNPKFKQSSYYKEI 662
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+E+ I ++ A D D ++ Y I GN + F ID G L
Sbjct: 663 LEDTRRGEAIEKVEAFDPDQLSNEDFEYAIEEGNSDDCFGIDPFQGVL 710
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 22/156 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
YY +I+E+ I ++ A D D ++ Y I GN + F ID + DL
Sbjct: 658 YYKEILEDTRRGEAIEKVEAFDPDQLSNEDFEYAIEEGNSDDCFGIDPFQGVLFLKCDLD 717
Query: 60 GGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+Y + I+V + N+N P VY ++EN I
Sbjct: 718 YKRKNMYNLKLRVTDADKKPGYAYFKIEVTDANNNSPRFGQDVYQWNVLENADIGTVIKS 777
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D + RI+Y + G+P F I +G++
Sbjct: 778 VLATDADTGENARITYSLQPGSPIDTFGIVNDTGAI 813
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
VY ++EN I + A+D D + RI+Y + G+P F I D G+ T
Sbjct: 760 VYQWNVLENADIGTVIKSVLATDADTGENARITYSLQPGSPIDTFGIVNDTGAITTKKKL 819
Query: 60 -----------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + + V I V +VNDN P +Y I E+
Sbjct: 820 DRETTKSYTLVVKASDHGKPFKKFGFATVVITVTDVNDNKPAFTKNLYTFTIEEDAKIGA 879
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ L A+D D ++ + Y+ E YF+I+ SGS+
Sbjct: 880 VVGHLQATDNDEGRNKEVRYQFKERKHE-YFSINAESGSI 918
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 50 FNIDIGS-DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
F+IDI + DL + + ++V +VNDN P + Y + E Q I+ + A+
Sbjct: 301 FSIDIRAIDLNDPSNSATTTIRVKVLDVNDNAPTFAESSYSITVDEGQVANKYILTVRAT 360
Query: 109 DGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
D D +Q I Y I + N + F ID SG++
Sbjct: 361 DADEGSNQEIRYSIVNKANVQVPFQIDPISGAI 393
>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
Length = 1368
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y+ V I++ +VNDN P+ Y A ++E + +V+L+ASD D + RI Y I
Sbjct: 1230 EAYVKVIIRISDVNDNPPIFTQMQYSATVLEGNTKGDFVVKLSASDADQGLNSRILYHIV 1289
Query: 124 AGNPESYFNI 133
GNP++ F I
Sbjct: 1290 DGNPDNAFTI 1299
>gi|444512234|gb|ELV10086.1| Cadherin-23 [Tupaia chinensis]
Length = 3381
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 510 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 569
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 570 YSIVNASAFGSYFDISVYEG 589
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1468 VASDCGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1527
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1528 GINSILSYYITEGNEDMTFRMDRISGEIA 1556
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 971 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSL 1030
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG ++ V +VNDN P+ L Y A + E
Sbjct: 1031 DRETTAAYTLILEAIDNGPVGKRRTGTA-----TAFVTVLDVNDNRPIFLQSSYEASVPE 1085
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQ AA+D D R+ Y+I GN + F I + +G L
Sbjct: 1086 DIPEGHSIVQ-AATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1130
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1503 YNVSVNENVGGGTAVVQVRATDRDIGINSILSYYITEGNEDMTFRMDRISGEIATRPAPP 1562
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ P Y + E I
Sbjct: 1563 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQRPHYEVLLDEGPDTINT 1622
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I +G
Sbjct: 1623 SLITIQALDLDEGPNGTVAYAIVAGNIINTFRIGRHTG 1660
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 538 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 597
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 598 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 657
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 658 AGATVLFLNATDLDRSREYGQESIIYSLEGSSRFRINARSGEI 700
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1785 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1844
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1845 ASDADSGCNALLTFNITAGNRERAFIINATTG 1876
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPDQV 65
A+++E + + Q+ A D D + +SY++ G P F I+ S + T D+
Sbjct: 869 AEVLEGTPAGISVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTAELDRE 928
Query: 66 YLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ Y I+V +VND P VY + E+ +V
Sbjct: 929 RIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRVVW 988
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L +D D+ + +SY I+ GN + F++
Sbjct: 989 LNCTDNDVGLNAELSYFITGGNVDGKFSV 1017
>gi|291231664|ref|XP_002735778.1| PREDICTED: celsr-like protein-like [Saccoglossus kowalevskii]
Length = 3835
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------SDL 58
Y+ + EN G P+V +A +D D D + I +GN S F++D ++L
Sbjct: 1833 YFGSVFENDDGTSPVVTMAVTDVDGD---NVGLSIISGNTGSVFSVDQSGNIYVIDSTNL 1889
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Y + V I V+ VN++ P+ P Y + E
Sbjct: 1890 DAETSAIYTLTIRATDDGTPSRASDTTVNILVKGVNEHAPVFPLPSYSESVYETDLAGTL 1949
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ ASD D D I+Y I +G+ E F ID SG +
Sbjct: 1950 VLQVIASDSDGGVDGDITYSIVSGD-EGKFGIDASSGEI 1987
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 3 LDPVYYAQIVENQSGILP-IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----- 56
DP+ Y +V + I ++ D D D Y I++GN ++YF ID S
Sbjct: 2242 CDPIGYNVVVPEDTSIDSYVITPNCMDDDFGSD--FVYTITSGNGDNYFRIDENSGSIYV 2299
Query: 57 ----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDP--VYYAQIVENQSG 98
++ G ++ ++ + VQ VN+ P+ +P VY+ ++EN +
Sbjct: 2300 NRMLDAETKTVHVLTMKISDGVNEGSAVITVAVQGVNEYPPV-YEPYSVYHCNVLENSAA 2358
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A D D+ D ++ Y+I+ GN + F I+ GS+
Sbjct: 2359 GTLVITVTAVDRDVMDDGKVYYEITDGNIDGVFEINDTEGSI 2400
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSDL---- 58
P Y + E+ IV + A+DGD P + Y I+A F I+ D+
Sbjct: 1316 PTYTTDVDEDIPIYSTIVTVTANDGDSADTPHGVVHYSIAAACACPQFGINTNGDVILLQ 1375
Query: 59 -------TGGP----------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
TG V + V + V +VNDN P+ P Y+ IV LP
Sbjct: 1376 NLDYETDTGHTITVEATDSSGTTVPVTVTLNVNDVNDNPPI-FSPTIYSVIVPEDMNNLP 1434
Query: 102 IVQLAASDGDLDP--DQRISYKISAGNPE--SYFNIDIGSGSL 140
I + ASD D DP + I Y I+ GNP+ S F ID +G++
Sbjct: 1435 IETVIASDND-DPVDNGLIQYVITGGNPDPTSIFTIDPSTGAI 1476
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 32/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL--DPDQ---RISYKISAGNPESYFNIDIGSDL--T 59
Y I EN +G ++ + A + D DPD +I Y I+ GN + F+ID S + T
Sbjct: 2562 YEKDIDENVAGHTSVITVNALEPDPKDDPDHVHSQIRYYITGGNEDGKFSIDTRSGVIYT 2621
Query: 60 GG-----------------------PDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
G D+++ +V I V +VNDN P +Y ++ E
Sbjct: 2622 AGIIDREETDFYTLEVTAIDSIPEFGDELHDTALVKITVNDVNDNAPAFEPTLYSIEVYE 2681
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ ++ L A+D DL +Q I Y I GN F+
Sbjct: 2682 TAAIDSTLMTLFATDNDLGTNQNIDYDILFGNTGGDFDF 2720
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 30 DLDPDQRISYKISAGNPESYFNIDIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDP 86
D++P Y +S+ P F + I + G G D + I V VN+N P
Sbjct: 1772 DINPTNGEIYLVSSIIPTDVFTLTITATDDGAVPGTDSSTQSLTITVDEVNNNPPSFDSL 1831
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
Y+ + EN G P+V +A +D D D + I +GN S F++D
Sbjct: 1832 NYFGSVFENDDGTSPVVTMAVTDVDGD---NVGLSIISGNTGSVFSVD 1876
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 33/153 (21%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKISAGNPE--SYFNIDIGS-- 56
P Y+ IV LPI + ASD D DP + I Y I+ GNP+ S F ID +
Sbjct: 1417 FSPTIYSVIVPEDMNNLPIETVIASDND-DPVDNGLIQYVITGGNPDPTSIFTIDPSTGA 1475
Query: 57 ------------------------DLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
DL GG +V + V+ N P+ D Y
Sbjct: 1476 ITNTVALDYDDVSQQIFQINVEARDLNGGVGYRSATAMVTVHVEGRNTETPIFDDTPYTT 1535
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
EN + Q++ASD D PD I + ++
Sbjct: 1536 SQQENIPVGQFVFQVSASDADFGPDGEIYFALT 1568
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
I+ I+V ++NDN P+ P+ I ENQ + I + A+D D++ + +SY + +G
Sbjct: 2867 FILNIEVTDINDNDPICDVPIDIIFIEENQGPDVLITTVHATDPDINENAELSYTVISGV 2926
Query: 127 PESYFNID 134
E F +D
Sbjct: 2927 NEYDFVLD 2934
>gi|326666670|ref|XP_002661517.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 2844
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG----- 60
Y +I EN ++ + A+DGD + + Y+I + S F ID + L
Sbjct: 196 YRVRIRENVEVGFEVITVRATDGDAPSNANMIYRIMNEEGVNSGFEIDSWNGLVKIKVRP 255
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V+I V++ NDN P + Y Q+ EN +
Sbjct: 256 DRETMAQYQLIVEASDQGKEPGPRSATATVHITVEDENDNYPQFSEKRYVVQVPENVAVN 315
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + R+ Y I +GN + F I +G++
Sbjct: 316 TKVAQVEATDRDEGNNARVHYSIISGNVKGQFFIHTPTGAI 356
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGS--------- 56
Y + E+ ++Q++ASD D + R+SY G+ E F I+ S
Sbjct: 720 YQGTVFEDAPIYTSVLQISASDRDSGSNGRVSYTFQGGDDGEGDFMIEQYSGIIRTHRKL 779
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P + + + + V ++NDN P+ Y + EN
Sbjct: 780 DRENVPVYNLRAYAVDRGVPPLKAAVEIQVSVLDINDNAPVFEKDELYIDVKENSPVDSV 839
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A D D + +I Y+I GN F++DI +G L
Sbjct: 840 VARITAMDPDEGTNAQILYQIVEGNIPEVFDLDIFTGDL 878
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
M + + A ++EN ++ + A D D + R+ Y ++ P F+I+
Sbjct: 404 MFVSTPFQATVLENVPIGYSVIHIQAIDSDSGENARLDYSLTDTTPGFPFSINNSTGWIT 463
Query: 54 IGSDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ +L + Y V I V +VNDN+P + +Y +I N+
Sbjct: 464 VSDELDRESTEFYTFGVEARDNGVPVMSSSASVSITVLDVNDNIPTFTEKMYSLKI--NE 521
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L + D D + ++Y+IS+GN + F I SG
Sbjct: 522 DAVVGTSVLTVTALDRDVNSVVTYQISSGNTRNRFAITSQSG 563
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 25/150 (16%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---------LTGGPDQ 64
N+ ++ L + D D + ++Y+IS+GN + F I S L ++
Sbjct: 520 NEDAVVGTSVLTVTALDRDVNSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQER 579
Query: 65 VYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
Y++ V+I V + N + P+ + Y+ E+Q +V ++A+D
Sbjct: 580 QYVLTITASDGTRFDTAQVFINVTDANTHRPVFQNANYHQTFSEDQPIGSTVVVISATDE 639
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D + RI+Y + P+ F ID SG++
Sbjct: 640 DTGENARITYIMEDNVPQ--FKIDPDSGAI 667
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+ E+Q +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 617 YHQTFSEDQPIGSTVVVISATDEDTGENARITYIMEDNVPQFKIDPDSGAITTQMEIDYE 676
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D Y V I + + NDN P Y + E+ +
Sbjct: 677 DQASYTLAIIARDNGIPQKSDTTY--VEIIILDANDNSPRFGRDKYQGTVFEDAPIYTSV 734
Query: 103 VQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSG 138
+Q++ASD D + R+SY G+ E F I+ SG
Sbjct: 735 LQISASDRDSGSNGRVSYTFQGGDDGEGDFMIEQYSG 771
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y Q+ EN + + Q+ A+D D + R+ Y I +GN + F I TG D +
Sbjct: 304 YVVQVPENVAVNTKVAQVEATDRDEGNNARVHYSIISGNVKGQFFIHTP---TGAIDVIN 360
Query: 67 LIVYIQVQNVN----------------------------DNVPMTLDPVYYAQIVENQSG 98
+ Y ++ N DN PM + + A ++EN
Sbjct: 361 PLDYETIREYNLRIKAQDGGRPPLINGTGVVVVQVVDVNDNAPMFVSTPFQATVLENVPI 420
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P F+I+ +G
Sbjct: 421 GYSVIHIQAIDSDSGENARLDYSLTDTTPGFPFSINNSTG 460
>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 1782
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 28/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-------------DPDQRISYKIS--AGNPESYFN 51
Y+ +VEN ++ + A+DGDL + DQR S+++ +G + +
Sbjct: 588 YHVSVVENAPAGTELLVVGATDGDLGDNGTVRFSLQEAEIDQR-SFRLDPVSGRLSTVSS 646
Query: 52 ID-----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D + +DL P V + + ++NDN P+ Y+A+I EN+ G
Sbjct: 647 LDREEQAFYSLLVLAADLGSPPQSSVARVNVSLLDLNDNSPVFYPVQYFARIQENEPGGS 706
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F + SG
Sbjct: 707 YITTVSATDPDLGLNGTVKYSISAGD-RSRFQVSAQSG 743
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P + Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFVKDFYQATISESAANLTQVLRVSASDVDEGSNGLIRYSVMKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y A I E+ + + +++++ASD D + I Y + GN E F ID S L G D
Sbjct: 1215 YQATISESAANLTQVLRVSASDVDEGSNGLIRYSVMKGNEERQFAIDSTSGQVTLIGKLD 1274
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y I + + NDN P + ++EN +
Sbjct: 1275 YEATAAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELV 1334
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D + + Y I+ N F+I +GS+
Sbjct: 1335 SSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAISRVTGQLTTASMIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN I Q A D D + + Y +
Sbjct: 874 TGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVFYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +GS+
Sbjct: 934 Q-NPKNLFTINEKNGSI 949
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGGPDQ-------------- 64
++A+DGD + + Y I +GN +F+I S L GG D+
Sbjct: 497 VSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGAAGGLDRELASQIVLNISARD 556
Query: 65 -------VYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Y + + + +VND P+ P Y+ +VEN ++ + A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYHVSVVENAPAGTELLVVGATDGDLGDNG 616
Query: 117 RISYKISAGN-PESYFNIDIGSGSL 140
+ + + + F +D SG L
Sbjct: 617 TVRFSLQEAEIDQRSFRLDPVSGRL 641
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLDITLSPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
>gi|347543909|gb|AEP02527.1| CDH23, partial [Chaerephon plicatus]
Length = 3209
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 528 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 587
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 588 YSIVNASAFGSYFDISVYEG 607
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------------NI 52
VY + E+ +V L +D D+ + +SY ++ GN + F N+
Sbjct: 989 VYNVSVSEDVPRDFRVVWLNCTDNDVGLNAELSYFVTGGNVDGKFSVGYRDAVVRTVVNL 1048
Query: 53 D------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
D +G TG ++ V +VNDN P+ L Y A + E
Sbjct: 1049 DRETTAAYTLILEAIDNGPVGKRRTGTA-----TAFVTVLDVNDNRPIFLQSSYEASVPE 1103
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I + G L
Sbjct: 1104 DIPEGHSIVQLKATDADEGEFGRVWYRILQGNHGNNFRIHVSDGLL 1149
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S
Sbjct: 1523 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNDDMTFRMDRVSGEIATRPAPP 1582
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D P VY+ + + NDN P+ P Y + E I
Sbjct: 1583 DRERQSFYHLVVTVEDEGTPPLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINA 1642
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V + A D D P+ ++Y I+AGN F ID +G
Sbjct: 1643 SLVTIQALDLDEGPNGTVTYAITAGNIIDTFRIDRHTG 1680
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1488 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1547
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1548 GINSVLSYYITEGNDDMTFRMDRVSGEIA 1576
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + ++
Sbjct: 1805 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVARIL 1864
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1865 ASDADSGCNALLTFNITAGNRERAFSINATTG 1896
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 556 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSR 615
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 616 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 675
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I SG L
Sbjct: 676 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRIGARSGEL 718
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 885 FVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTTELD 944
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 945 RERIAQYQLRVVATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRV 1004
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY ++ GN + F++
Sbjct: 1005 VWLNCTDNDVGLNAELSYFVTGGNVDGKFSV 1035
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D + ++Y + G E
Sbjct: 2485 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGSNGELTYSLE-GPGE 2543
Query: 129 SYFNIDIGSG 138
F++D+ SG
Sbjct: 2544 EAFHVDMDSG 2553
>gi|157114695|ref|XP_001652377.1| cadherin [Aedes aegypti]
gi|108877196|gb|EAT41421.1| AAEL006955-PA [Aedes aegypti]
Length = 1727
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 47 ESYFNIDIGSDL-TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ Y I+ +L G + V L+V+I +VNDN P+ L +Y A+++EN+ + L
Sbjct: 338 KHYLTIEARDNLGRGNRNSVQLVVHIL--DVNDNAPVFLQSMYEARLMENKLSFETPLVL 395
Query: 106 AASDGDLD--PDQRISYKISAGNPESYFNIDIGSGSL 140
A D DL+ + I ++I G + F ID SG L
Sbjct: 396 EARDADLNGTKNSEIKFEIVEGQFKDNFTIDAKSGKL 432
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 34/162 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESYFNIDIGSD--- 57
L +Y A+++EN+ + L A D DL+ + I ++I G + F ID S
Sbjct: 374 LQSMYEARLMENKLSFETPLVLEARDADLNGTKNSEIKFEIVEGQFKDNFTIDAKSGKLV 433
Query: 58 ---------LTGGPDQVYLI-------------------VYIQVQNVNDNVPMTLDPVYY 89
LT G + I V I VQ+VND+ P L VY
Sbjct: 434 PLTPIDFELLTSGTFNIRPIFLTVLASDSGVPKLSTKVPVTIHVQDVNDHPPQFLHSVYT 493
Query: 90 AQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESY 130
+ EN PI+++ A D D P+ I Y+I +G + +
Sbjct: 494 QSVPENLPSGSPILEVKAIDKDGSSPNNFIVYRIQSGASDKF 535
>gi|403255758|ref|XP_003920578.1| PREDICTED: protocadherin gamma-B7 [Saimiri boliviensis boliviensis]
Length = 832
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q +Y ++ +D P + + + +VNDNVP+
Sbjct: 406 TDGALDREQTPAYNVTV----------TATDRGKPPLSSSKTITLHITDVNDNVPVFGQS 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
Y + EN I Q++ASD D P+ R+SY I A + ES
Sbjct: 456 AYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYSIVASDLES 498
>gi|348519324|ref|XP_003447181.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2850
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL----- 58
+Y + EN L +V ++A+D D + ++ Y+I++GN F+I ++G+
Sbjct: 1147 LYEVGVDENADVGLAVVTVSANDEDEGANAKLRYQITSGNKGGVFDIEPEVGTIFIAQPL 1206
Query: 59 --------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIV 103
+ G + Y V + V N ND P+ YY + E G + ++
Sbjct: 1207 DYEQQKRYKLLILASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVL 1266
Query: 104 QLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D D DQ I Y I ES+F I+ +G +
Sbjct: 1267 QVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEM 1304
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
D + R SY + + + + G + D Y+ V+I +VNDN P+ +Y
Sbjct: 1093 FDREARSSYLLEVQSEDGQESARPGKNKQPNTDTAYVRVFIS--DVNDNKPVFAQRLYEV 1150
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ EN L +V ++A+D D + ++ Y+I++GN F+I+ G++
Sbjct: 1151 GVDENADVGLAVVTVSANDEDEGANAKLRYQITSGNKGGVFDIEPEVGTI 1200
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 49 YFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+F++ + ++ P + VY+ + +VNDNVP +Y A + E ++Q++A
Sbjct: 993 FFSLQVRAQNVAAVPLAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQIGTSVLQVSA 1052
Query: 108 SDGDLDPDQRISYKI---SAGNPESYFNID 134
D DL + I+Y + S+G+ + F ID
Sbjct: 1053 HDKDLGLNGEITYSLLSDSSGD-HNLFRID 1081
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
Query: 29 GDLDPDQRISYKISAGNPESYFN-IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
G + P +R+ Y+ P + + + D P V +++ NVND P PV
Sbjct: 549 GTVFPARRLDYE----RPNHLYEFVVMAVDSGDEPHSGTATVRVRMANVNDEAPEFSQPV 604
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y + E+ + + A D D D I Y I+AGN E F ID G
Sbjct: 605 YRTFVSEDAGPNTLVATVLAKDPDGDG---IIYSITAGNEEENFVIDSQKG 652
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y+ V I++ +VNDN P+ Y A ++E + +V+L+ASD D + RI Y I
Sbjct: 1316 EAYVKVIIRISDVNDNPPIFTQIQYSATVLEGNTKGDFVVKLSASDADQGLNSRILYHIV 1375
Query: 124 AGNPESYFNI 133
GNP++ F I
Sbjct: 1376 DGNPDNAFTI 1385
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD + R Y + GN N G + P +IV I V++VNDN P L+ +Y
Sbjct: 1694 LDRETRNRYMLQLGN--KIENTTTGLLMGDEP----IIVTINVEDVNDNYPHFLEKLYEV 1747
Query: 91 QIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSGSL 140
I E+ I L A D DL + Y I++GN F ++ +G++
Sbjct: 1748 SIKEDAPYGTTIAVLQAKDDDLVNTTAATLVYDITSGNDGGLFRVEKTTGAV 1799
>gi|443731666|gb|ELU16708.1| hypothetical protein CAPTEDRAFT_199171 [Capitella teleta]
Length = 1979
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 30/165 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------I 54
VY A I EN + + + A+D D +I YK+ G S F +D
Sbjct: 568 VYNASIYENSALGTNVTTITATDQDSGNFGQIQYKLR-GAASSLFTVDPLTGLITVAVNA 626
Query: 55 GSDLT------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
DL GG + + + I++ +VNDN P + Y I EN
Sbjct: 627 NQDLNLLNRERIDEQYLTLEAQDGGGLRTLVQLGIKLLDVNDNAPQIMRSFYEGFISENS 686
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + + A+D DL P+ +S+ I G+P F ID +GS+
Sbjct: 687 DSLDRPLMIEATDADLPPNNALSFSIVEGDPFENFTIDSLTGSIS 731
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 39/172 (22%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-- 60
+ Y I EN + + + A+D DL P+ +S+ I G+P F ID LTG
Sbjct: 674 MRSFYEGFISENSDSLDRPLMIEATDADLPPNNALSFSIVEGDPFENFTID---SLTGSI 730
Query: 61 ----------------GPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYA 90
G ++ ++ V I VQ++ND P P+ Y+
Sbjct: 731 SVRSPLDYEDMDPSMDGKFELKVLARDGGLPSLSSFTDVTIFVQDINDEQPF-FQPLSYS 789
Query: 91 QIV-ENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ +G I Q+ D D P+ I Y+I +G + F +D +G L
Sbjct: 790 SVFSEDTTGGTLITQVFCFDNDGTAPNNEIIYRIESG-AQDKFRMDAETGQL 840
>gi|403273767|ref|XP_003928672.1| PREDICTED: cadherin-23 [Saimiri boliviensis boliviensis]
Length = 3354
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+ GN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNLDGKFSVGYRDAVVRTVVSL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTATYMLILEAIDNGPVGKRHTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1114 DIPEGHSIAQLKATDADEGEFGRVWYRILHGNQGNNFRIHVSNGLL 1159
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDN+P Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNIPTFQKDSYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGSPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNQDMTFRMDRVSGEIA 1586
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPISSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNREQAFFINATTG 1906
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNQDMTFRMDRVSGEIATRPAPP 1592
Query: 63 DQ-----VYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1593 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFRQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ + A D D P+ ++Y I AGN + F+ID
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIIAGNIINTFHID 1686
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLMVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSAQFRINARSGEV 728
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ P F I+
Sbjct: 895 FVAEVLEGTPAGVSIYQVVAVDLDEGLNGLVSYRMQVAMPRMDFLINSSSGVVVTTAELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SDL + I V +VND +P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDLGTPTKSSTSTLTIHVLDVNDEMPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNLDGKFSV 1045
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDVDSG 2563
>gi|336244959|gb|AEI28397.1| FAT tumor suppressor-like protein 4, partial [Pelophylax
nigromaculatus]
Length = 254
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDL---------------------TGGPDQVYLIV 69
+D + I+Y I G+ + F ID + L +GGP IV
Sbjct: 31 MDLNTNITYLIITGDQKGVFTIDKTTGLIMTAGLIDREDQSFYYLKVVASGGPVTGEAIV 90
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V+++NDN P L V +VEN I Q A D D + R++Y + NP
Sbjct: 91 NITVKDLNDNSPHFLHAVESVNVVENWKAGHVIFQAKAVDPDEGVNGRVTYGLKQ-NPLG 149
Query: 130 YFNIDIGSGSL 140
F++D SG++
Sbjct: 150 LFHVDTISGTV 160
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L V +VEN I Q A D D + R++Y + NP F++D S
Sbjct: 105 LHAVESVNVVENWKAGHVIFQAKAVDPDEGVNGRVTYGLKQ-NPLGLFHVDTISGTVSIT 163
Query: 57 ---DLTGGPDQVYL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D++ G QV + I+ + V +VNDN P+ Y ++E++
Sbjct: 164 GVLDVSAGSYQVEILAADTGVPQLTSSFILTVSVHDVNDNPPIFDQLSYEVTLLESEPVN 223
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGN 126
++ ASD D + ISY I+ GN
Sbjct: 224 SGFFKIHASDKDSGANGEISYHITDGN 250
>gi|281337852|gb|EFB13436.1| hypothetical protein PANDA_009559 [Ailuropoda melanoleuca]
Length = 1082
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 729 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLLPMDREHTDLYLLNITIY 788
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 789 DLGNPQKSSWRLLTINVEDANDNSPVFLQDSYSVNILESSSIGTEIIQVEARDKDLGSNG 848
Query: 117 RISYKI 122
++Y +
Sbjct: 849 EVTYSV 854
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 174 PSMHIEFPENTPREVKRTLLPARDLDLEPFNTQKYNIVSGNVNDAFRLSSHRERDGVLYL 233
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + ++ V I +Q+VNDN P+ Y+A +
Sbjct: 234 DLQISGFLDRETTPGYSLLIEALDGGSPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 293
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D D + + Y I+ + E F ID +G++
Sbjct: 294 ENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEKMFRIDPRTGAI 342
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------------------- 53
+ + A D D + RI+Y+IS GN E F I+
Sbjct: 1623 VAHIVAVDEDTGENGRITYEISGGNGEGRFRINPQTGVIELAKSLPPATEDEDKSGRFNL 1682
Query: 54 -IGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
I + G P+ + + I VQ ++N P L+ VY A+I+EN ++Q+ A
Sbjct: 1683 LITAKDHGEPEAKSSQMSLQILVQGNHNNPPRFLEAVYEAKILENAPSGSFVLQVTAKTF 1742
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I AG + F++D G
Sbjct: 1743 HGVENANLSYEIPAGVADDLFHVDWQRG 1770
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 67 LIVYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKIS 123
L V I V + NDN P+ Y A+I E I QL A+D D + P+ + Y I+
Sbjct: 2743 LSVIITVLDANDNFPVFDKSAKYEAEISELAPLRYSIAQLLATDADQENNPNSEVVYDIT 2802
Query: 124 AGNPESYFNIDIGSGSL 140
+GN E F ID+ +G L
Sbjct: 2803 SGNDEHMFTIDLVTGVL 2819
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ L SD D +QR Y + SD+ G +V V I++++ ++
Sbjct: 2925 PVTGLMTSDAVFDYEQRQRYDLQLE----------ASDMGGKKARVG--VRIEIESKDEF 2972
Query: 80 VPMTLDPVYYAQIVENQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 135
P + Y + V + LP + Q+ A+DGD PD R+ Y++SA P S F ++
Sbjct: 2973 APQFTERTY--RFVLPAAVALPQGFVVGQVTATDGDSGPDGRVVYQLSA--PHSNFKVNR 3028
Query: 136 GSGSL 140
SG++
Sbjct: 3029 SSGAI 3033
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y+ + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1017 LTILLDVQDVNDNPPVFEREEYFVNVSESRSINTQIIQVNASDLDTGNNARITYRI 1072
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD + Y I +G+P+ YF+I+ S T G
Sbjct: 848 ATSGDTAHRSPMRYSIYSGDPDGYFSIEANSGNIRIAKPLDHEAKSQVLLNIQATVGEPP 907
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + EN P+ A D D +++Y +
Sbjct: 908 VYGHTQVNIEVEDVNDNAPEFETNMVRISVPENAELGAPLYAAHAHDRDSGSSGQVTYSL 967
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + + F+ID SG L
Sbjct: 968 ARDSGKRLFSIDARSGHL 985
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
I + A D D P+ + Y I+AGN + F+ID S
Sbjct: 1865 IHTVVAIDLDEGPNADLVYSIAAGNLGNKFSIDARSGELRVQPLDREQHSRYTLQVQAAD 1924
Query: 59 TGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P Q + + + V++ NDN P Y A + E+ + Q+ ASD DL +
Sbjct: 1925 RGKPTSRQGHCNITVFVEDQNDNAPRFELSKYTASVQEDAPPGTRVAQITASDADLGVNA 1984
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1985 RLVYSL-ANESQWQFAIDSSSG 2005
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYY----AQIVENQSGILP--IVQLAASDGDLDPDQR 117
Q + V +++ +VNDN P + P A I N + + + + A D D + R
Sbjct: 1579 QTSVTVRLRIVDVNDNAPHFVSPKAANGKGASIFINDATRIGEVVAHIVAVDEDTGENGR 1638
Query: 118 ISYKISAGNPESYFNIDIGSG 138
I+Y+IS GN E F I+ +G
Sbjct: 1639 ITYEISGGNGEGRFRINPQTG 1659
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLT--- 59
+Y+A ++E ++Q+ A D D + ISY + A PE+ +F ID + L
Sbjct: 505 LYHANVMEVADPGTSVLQVLAHDRDEGLNSVISYSL-AETPETHAQWFQIDSQTGLITTR 563
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P V + + +VNDN P+ Y + EN+
Sbjct: 564 SHIDCETEPVPQLTVIARDGGVPPLSSSATVLVTIHDVNDNEPIFDQSFYNVSVAENEPV 623
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
I++++ASD D + ++Y + G + F + SG +
Sbjct: 624 GRCILKISASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEI 666
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ I +D GG +I +Q+ +VNDN P+ Y
Sbjct: 670 GELDFEKRSSYEFPV----------IATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 717
Query: 89 YAQIVENQSGILP-----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ +V + A+D D ++SY+I +GN F ID SG +
Sbjct: 718 NVSLKESSQSPAQSSSAPVVAVVATDPDSGTFGKVSYRIVSGNDAGIFRIDRSSGEI 774
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-------------DPDQR------ISYKISA---- 43
Y +VEN ++ L A+D DL + DQR +S K+S
Sbjct: 588 YDVSVVENAPTGTELLVLRATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGKLSTIASL 647
Query: 44 -GNPESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++++++ + +DL P + + + + +VNDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDVNDNSPVFYPIQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + I Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSG 743
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ + P+Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPVFVQPLYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIVDGNAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + I Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGHL 848
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQ-LAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+ + + GI IV+ ++A D D + ISY IS+GN E F I+ +
Sbjct: 3093 HMSATIPESHGIGAIVRTVSARDRDAAMNGLISYSISSGNEEGIFAINSSTGVLTLAKAL 3152
Query: 57 --------DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++T GG Y V + V +VNDN P+ Y+ ++EN
Sbjct: 3153 DYELCQKHEMTISATDGGWVSRTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTT 3212
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L A+D D + I+Y I + + + F ID +G
Sbjct: 3213 VIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTG 3248
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y I + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGMDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + + V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PLSSYEKLDLTVLDVNDNSPVFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F I+ +G +
Sbjct: 2707 IVNGNKEHSFAINHATGEI 2725
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIQGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGHLTTASVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN I Q A D D + + Y +
Sbjct: 874 TGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFTINEKNGNI 949
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V ++NDNVP +Y+ I E+
Sbjct: 2323 DRETKEHFVLMITATDSGSPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
>gi|395542518|ref|XP_003773176.1| PREDICTED: protocadherin-23 [Sarcophilus harrisii]
Length = 2705
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
I + SD P + I V +VNDN P+ P YYA + E+ IV ++A D D
Sbjct: 1967 IIMASDHGHPPLNSTATILIDVLDVNDNTPIFNSPEYYAHVRESLPVGSQIVVVSAKDHD 2026
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I+Y I +GN +F ID +G++
Sbjct: 2027 SGANSEITYTIISGNEREHFQIDGETGAI 2055
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
Y V + VQ+VNDNVP+ Y + E Q I+Q+ A D D + +I Y I +
Sbjct: 1554 TYCKVTVLVQDVNDNVPVFHPNTYQTSVSEGQIFNTQIIQVFAVDLDSGLNGQIEYSILS 1613
Query: 125 GNPESYFNIDIGSG 138
GN + F ID SG
Sbjct: 1614 GNQDEAFQIDAVSG 1627
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
Y + E Q I+Q+ A D D + +I Y I +GN + F ID S
Sbjct: 1576 TYQTSVSEGQIFNTQIIQVFAVDLDSGLNGQIEYSILSGNQDEAFQIDAVSGVIATNMVL 1635
Query: 57 --DLTGGPDQVY-------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT V +V IQV ++NDN+P L P +I + +
Sbjct: 1636 DYELTNSYSLVVHAADKGIPRLSATAVVKIQVVDLNDNIPAFL-PFERVEITQESIPVGS 1694
Query: 102 IV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A D D P S+ GNP + F ID +G++
Sbjct: 1695 LVTRVHAHDRDSGPALVFSFT-KKGNPGNKFTIDHNTGAV 1733
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +Q++ ++++ + +D P +I YI V+++NDN P P + +
Sbjct: 583 LDREQQVHHQLTV----------LVTDHGSPPRNATMITYISVKDLNDNKPYF--PQFLS 630
Query: 91 ------QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+I+E Q+ + + + A D D + I Y + + +F ID SG +
Sbjct: 631 GKELKIKILEGQTADMLVTTVFAKDLDSGNNGEILYSLFSEESSEHFKIDANSGEI 686
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V + ++++NDN P L +Y A I E + + +++++ASD D + +I Y + GN
Sbjct: 1193 VVQVYMKDINDNAPKFLKDLYQATISELAANLTQVLRVSASDVDEGSNGQIHYSVVKGNE 1252
Query: 128 ESYFNIDIGSGSL 140
E F ID +G +
Sbjct: 1253 EKMFAIDSATGQV 1265
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 27/149 (18%)
Query: 17 GILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------- 58
G LP I+Q+ A D D P+ +++Y + GN ++ F + +L
Sbjct: 2271 GTLPKTILQVVARDDDQGPNSKLTYMLIGGNEDNAFILSASGELKVIQSLDRETKEKCIL 2330
Query: 59 ------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+G P V + V +VNDN+P +Y A I E+ ++ + ASD D
Sbjct: 2331 LITATDSGSPALTGTGTVNVIVDDVNDNIPTFAHKMYSATISEDAPTGSDVLLVNASDAD 2390
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ISY++ GN S F I+ +G +
Sbjct: 2391 ASTNAVISYRLIGGN--SQFTINPSTGQI 2417
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 27/150 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-FNID------------ 53
Y + EN ++ + ASDGDL + + + E F +D
Sbjct: 586 YEVSVAENAPAGTDLLVIEASDGDLGDNGTVRFSFQESETEQRAFRLDPVSGRLSTISSL 645
Query: 54 ------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ DL G P Q L V + + +VNDN P+ Y+A I EN+
Sbjct: 646 DREEQAFYSLLVLAVDL-GSPAQSSLTRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGS 704
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESY 130
I ++ASD D P+ + Y ISAG+ +
Sbjct: 705 YITTVSASDPDSGPNGTVKYSISAGDTSGF 734
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + A+I+EN S ++ ++A D D P+ ++ Y
Sbjct: 2648 PFSSYEKLAIAVMDVNDNSPIFKEDPFVAEILENLSP-RTLLTVSAMDKDSGPNGQLEYS 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I +G +
Sbjct: 2707 IVNGNIENSFSIHHSTGEI 2725
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L +Y A I E + + +++++ASD D + +I Y + GN E F ID + L
Sbjct: 1209 LKDLYQATISELAANLTQVLRVSASDVDEGSNGQIHYSVVKGNEEKMFAIDSATGQVSLA 1268
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1269 GQLDHEATSSYSLLIQAVDSGAVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1328
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + I Y I+ N F+I +G +
Sbjct: 1329 GELVTSVTATDSDSGDNADIHYSITGTNNHGTFSISPNTGGI 1370
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y +I EN IVQ+ A+DGD + ++ Y + GN F +D +
Sbjct: 2156 LYKVEIDENTLTGTDIVQVYAADGDEGTNGQVRYSLLRGNENHEFRMDSVTGILSVAKPL 2215
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2216 DREKKAAYSLTVQSVDRGSSPRMDTTTVEIILLDINDFVPVFELSPYSINVPENL-GTLP 2274
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYF 131
I+Q+ A D D P+ +++Y + GN ++ F
Sbjct: 2275 KTILQVVARDDDQGPNSKLTYMLIGGNEDNAF 2306
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V I V+++NDN P L V + +VEN I Q A D D + + Y + NP
Sbjct: 876 LVNITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQAKALDPDEGVNGMVLYSLKQ-NP 934
Query: 128 ESYFNIDIGSGSL 140
++ F ID +G++
Sbjct: 935 KNLFTIDEKNGNI 947
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + GN S ID LTG D+ + Y
Sbjct: 2067 VFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTIVATD 2126
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ + ++NDN P+ +Y +I EN IVQ+ A+DGD + +
Sbjct: 2127 KGQPALSSSTEVAVIILDINDNNPIFAQALYKVEIDENTLTGTDIVQVYAADGDEGTNGQ 2186
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y + GN F +D +G L
Sbjct: 2187 VRYSLLRGNENHEFRMDSVTGIL 2209
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGSDLTGGP-------- 62
E+QS + ++A D D + ++Y IS+GN + F N G+ + P
Sbjct: 3100 ESQSVGSVVRTVSARDRDAAMNGLLTYHISSGNEDGLFAINASTGALILAKPLDYELHQK 3159
Query: 63 --------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
Y + I V +VNDN P+ + Y ++EN +++L A+
Sbjct: 3160 HEMTISATDGGWVARTSYCSIIINVLDVNDNSPVFVPEEYSPTVLENAPSGTTVMRLNAT 3219
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D + I+Y + + + + F ID SG
Sbjct: 3220 DADSGSNAVIAYSLQSSDSD-LFVIDPNSG 3248
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + VY + +VNDN P+ Y ++EN I+ +D D P+ ++S
Sbjct: 1919 GGGQFMTIRVYFNILDVNDNPPVFSLTSYSTSLMENLPLGSTILIFNVTDADDGPNSQLS 1978
Query: 120 YKISAGNPESYFNID 134
Y I++G+ F +D
Sbjct: 1979 YSITSGDSLGQFTVD 1993
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGG--- 61
Y ++EN +++L A+D D + I+Y + + + + F ID S + T G
Sbjct: 3199 YSPTVLENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSD-LFVIDPNSGIITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V I ++ N+ VP + +YY +I E S +
Sbjct: 3258 YETKQSYHLTVKAFNVPDEERCSFATVNIHLKGTNEYVPRFVSKLYYFEISEAASKGSVV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDMGTDGEVHYLIFGTSRKKGFQINSRTGQI 3355
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGS---DLTGG 61
+Y QI E + ++A D D P+ R SY I +GN F+I+ + +T
Sbjct: 3408 IYNVQISEGVPIGTHVTFVSAFDSDSVPNWSRFSYFIGSGNENGAFSINPQTGQITVTAE 3467
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ L VY + ++++NDN P TL + +++EN+
Sbjct: 3468 LDRETLPVYNLTVLAVDLGTPSATGSASLLVTLEDINDNGP-TLS-IREGEVMENKRAGT 3525
Query: 101 PIVQLAASDGDLDPDQ--RISYKISAGNPESYFNI 133
++ L ++D DL P+Q Y +S G SYF++
Sbjct: 3526 LVMTLHSTDPDLPPNQGPFTYYLLSTGPATSYFSL 3560
>gi|449284111|gb|EMC90692.1| Neural-cadherin [Columba livia]
Length = 2537
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVN 77
I P + ++ D ++R SY I + +S + G + G P+ V I V +VN
Sbjct: 812 IEPETGVISTHASFDREKRASYLIEVQSQDSSESARPG--VHGHPNTDTAYVRIFVSDVN 869
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
DN P VY I E++ P+V A D D + ++ Y+I++GN + F+++
Sbjct: 870 DNAPAFPRSVYEVSIDEDRDVGSPVVTATAHDEDEGANAKLRYQITSGNLKGVFDVEPEV 929
Query: 138 GSL 140
G++
Sbjct: 930 GTV 932
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL----- 58
VY I E++ P+V A D D + ++ Y+I++GN + F++ ++G+
Sbjct: 879 VYEVSIDEDRDVGSPVVTATAHDEDEGANAKLRYQITSGNLKGVFDVEPEVGTVFITQPL 938
Query: 59 --------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIV 103
+ G + + ++ I V N ND P+ L Y ++E + + + ++
Sbjct: 939 DYEQEQRYELRLVASDGKWENHTLIIINVINKNDEAPVFLQNEYQGSVLEELTDLPVFVL 998
Query: 104 QLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+++A+D D DQ I+Y + S F+I+ +G +
Sbjct: 999 KVSATDPDQAADQNAINYSLHGQGASSEFSINENTGEI 1036
>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
Length = 4335
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ + A D D D + Y + G + F+I+
Sbjct: 1035 VHQGQVQENSPPGTQVIVVTAHDDDSGLDGELQYFLRDGTSLTAFSINQDTGMIQTLATL 1094
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V +VNDN P PV+Y + E+
Sbjct: 1095 DREFVPCYWLTVLAVDRGSVPLSAVTEVYIEVTDVNDNPPRMSRPVFYPSVQEDAPLHTS 1154
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1155 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFAIHPLTGLL 1193
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDLT----- 59
Y ++EN P+ L D D+ R ++ I+ G+P F I +G + +
Sbjct: 2912 YRGSVIENSEPGEPVATLKTFDADISEQNRQVTCYITEGDPLGQFGISQVGDEWSIFSRK 2971
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G Q +IV I V ++NDN P +Y ++ E+ S I
Sbjct: 2972 TLDREHIAKYLLRITASDGKFQASVIVEIFVLDINDNSPQCSQLLYTGKVSEDISPGHFI 3031
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+Q++A+D D D + +I+Y + G F +D +G L
Sbjct: 3032 LQVSATDLDSDTNAQITYTLH-GPGADEFKLDPHTGVL 3068
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F ID +
Sbjct: 2173 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTIDFKTGVLTVTGP 2229
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2230 LDYESKTKHVFTVRATDTAQGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2289
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2290 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2330
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLI 68
QIVE+ S + Q+ S G++ Q + Y+ + +F++ + + G P +
Sbjct: 2309 QIVEDGSDVSKFFQINGSTGEMSTVQELDYE-----SQQHFHVKVRAMDRGNPPLTGETL 2363
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV-QLAASDGDLDPDQR----ISYKIS 123
V + V ++NDN P P Y A + E L I LA LDPD R + Y I
Sbjct: 2364 VVVGVSDINDNPPEFRQPQYEATVSE-----LAICGHLALKVQALDPDSRDTSRLEYLIL 2418
Query: 124 AGNPESYF 131
+GN + F
Sbjct: 2419 SGNQDRQF 2426
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 28/145 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 LARLAATDPDTGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATSFYILNVTVY 792
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P P Y + +G+ I +L A D D D +
Sbjct: 793 DLGTPRKSSWKLLTVHVKDCNDNAPR-FPPGGYQITISEDTGVGTTIAELKAKDADSDDN 851
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 852 GRVRYTLLS--PTEKFSLHPLTGEL 874
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---G 125
V IQV++VNDN P+ Y A + EN ++Q+ A+D D D ++SY++
Sbjct: 2784 VNIQVKDVNDNRPIFEADPYKAILTENMPVGTAVIQVTANDQDTGKDGQVSYRLPMDPDS 2843
Query: 126 NPESYFNIDIGSG 138
N F ID +G
Sbjct: 2844 NIHELFAIDSETG 2856
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGPDQVYLIVY----------------I 71
G DP+ +++ +P S + +G DL+ GP Q L V I
Sbjct: 1486 GSQDPESASLFQL---DPSSGVLVTVGKLDLSSGPSQHMLTVMVRDQEMPIRRNFVWVSI 1542
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
V++ N + P Y A + + ++Q+ A DGD + + Y + GN E +F
Sbjct: 1543 HVEDGNRHPPRFTQLHYEASVPDTTVPGTELLQVRAMDGDRGANAEVHYSLLKGNSEGFF 1602
Query: 132 NID 134
NI+
Sbjct: 1603 NIN 1605
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
S++N+ +G+ + G Q + VYI N N P VY A++ EN +++L A
Sbjct: 2447 SFYNLRVGA--SDGVFQTTVPVYINTTNANKFSPEFQQHVYEAELAENAKVGTKVIELLA 2504
Query: 108 SDGDLDPDQRISYKISAGNPESYFNID 134
D D P + Y I + F+I+
Sbjct: 2505 IDKDSGPYGTVDYTIINKLADEKFSIN 2531
>gi|351713329|gb|EHB16248.1| Protocadherin Fat 3 [Heterocephalus glaber]
Length = 1039
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ + A D D + ++ + IS GN +S FNID+ +
Sbjct: 678 ILNIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 737
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 738 DLGNPQKSSWRLLTINVEDANDNSPIFLQESYSVNILESSSIGTEIIQVEARDKDLGSNG 797
Query: 117 RISYKISAGNPESYFNIDIG 136
++Y + + N G
Sbjct: 798 EVTYSVLTNTQQFAINSSTG 817
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VY++ ++NDNVP L +Y A + E + + +++++ASD D + I Y +
Sbjct: 1236 DQATVQVYLK--DINDNVPKFLKELYQATVSELAANLTQVLRVSASDVDEGKNGLIHYSV 1293
Query: 123 SAGNPESYFNIDIGSGSL 140
GN E F ID +G +
Sbjct: 1294 IKGNEEKQFTIDNSTGQV 1311
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + VYI + +VNDN P+ Y ++EN S I +D D + ++S
Sbjct: 1965 GGGQSITVRVYINILDVNDNAPIFSMDSYSTSLMENLSPGSTIFLFNVTDADDGSNSQLS 2024
Query: 120 YKISAGNPESYFNID 134
Y I++G+ S FNID
Sbjct: 2025 YSITSGDSLSQFNID 2039
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L+A+D D + I+Y + + + + F ID G T G
Sbjct: 3243 YFPSVLENAPSGTTVIHLSATDADSGSNAVIAYAVQSSDSD-LFVIDPNTGIITTQGFLD 3301
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V I ++ N+ VP + +YY ++ E + +
Sbjct: 3302 YETKQSYHLTIKAFNVPDEERCSFANVNIHLKGTNEYVPRFVSKLYYFEVSEAAAKGTIV 3361
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D D + Y I + + F ID+ SG +
Sbjct: 3362 GEVFASDRDTGTDGEVHYLIFGNSRKKGFQIDVSSGQI 3399
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 29/130 (22%)
Query: 37 ISYKISAGNPESYFNID------------------------IGSDLTGGPDQVYLIVYIQ 72
+SY I++GN S F ID D+ P Y + I
Sbjct: 2643 LSYYIASGNLGSTFQIDQLTGHFSISQPLDYEAIQKYVVWIEARDMGFPPFSSYAKLEIT 2702
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESY 130
V ++NDN+P+ + ++VEN I P I+ + A+D D P+ +++Y+I +GN ++
Sbjct: 2703 VIDINDNMPVFEQDPFIVEVVEN---IPPSKIITVTAADKDSGPNGQLNYEIISGNVDNS 2759
Query: 131 FNIDIGSGSL 140
F+I +G +
Sbjct: 2760 FSIHRANGEI 2769
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 36/167 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-------ISAGNP------------- 46
Y+ + EN ++ L A DGDL + + + +SAG P
Sbjct: 622 YHVSVAENSPSGTELLVLTAIDGDLGDNGTVRFSLQETEPGVSAGGPFVAPWRIFRLDPV 681
Query: 47 --------------ESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQ 91
+ ++++ + + G P ++ V + + +VNDN P+ Y+A
Sbjct: 682 SGRLSTISQLDREEQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLFYPVQYFAH 741
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I EN+ + ++ASD DL + + Y ISAG+ S F I +G
Sbjct: 742 IQENEPAGSYVATVSASDPDLGINGTVRYTISAGD-TSRFQIHNQTG 787
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++NDN P+ +Y +I EN +VQ++++DGD + ++ Y I +GN + F ID
Sbjct: 2190 DINDNNPVFAQKLYKIEIAENILTGTDVVQVSSTDGDEGSNGQVRYAIISGNINNEFRID 2249
Query: 135 IGSG 138
+G
Sbjct: 2250 SVTG 2253
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
AS G L + + Y++ + S ID G G Y + + V +VNDN P+
Sbjct: 3185 ASTGALSLAKPLDYEVCQKHEMSISAIDGGWVARTG----YCSITVNVIDVNDNSPVFSP 3240
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y+ ++EN ++ L+A+D D + I+Y + + + + F ID +G
Sbjct: 3241 EDYFPSVLENAPSGTTVIHLSATDADSGSNAVIAYAVQSSDSD-LFVIDPNTG 3292
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 27/156 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY----------------- 49
Y+A I EN+ + ++ASD DL + + Y ISAG+ +
Sbjct: 738 YFAHIQENEPAGSYVATVSASDPDLGINGTVRYTISAGDTSRFQIHNQTGVITSKTVLDR 797
Query: 50 -----FNIDIGSDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + IG+ GG Q IV + V + DN P+ Y + EN + +
Sbjct: 798 EEKTAYQLQIGA-YDGGNLQSQNQAIVTVNVLDTQDNPPVFSQDTYSFVVFENVALDYHV 856
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++AS DL+ + I+Y I+ G+ F I+ +G
Sbjct: 857 GSVSASTMDLNTN--ITYLITMGDQRGMFEINKVTG 890
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGS---DLTGG 61
VY QI E + ++A D D P R SY I GN F+I+ + +T
Sbjct: 3452 VYNVQISEGVPVGTHVTFVSAFDSDSLPSWNRFSYFIGNGNHNGAFSINPQTGQVTVTAE 3511
Query: 62 PDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D+ L VY I ++++NDN P+ +I+EN
Sbjct: 3512 LDRETLPVYNLCVLAIDSGAPSATGSASLLITLEDINDNGPIL--STTEGEIMENSRAGT 3569
Query: 101 PIVQLAASDGDLDPDQR-ISYK-ISAGNPESYFNIDIG 136
++ L +SD DL P+Q SY +S G SYF+++
Sbjct: 3570 LVMTLQSSDPDLPPNQGPFSYHLLSTGTATSYFSLNTA 3607
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 27/154 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y +I EN +VQ++++DGD + ++ Y I +GN + F ID +G L
Sbjct: 2202 LYKIEIAENILTGTDVVQVSSTDGDEGSNGQVRYAIISGNINNEFRIDSVTGVITVGKSL 2261
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Y + V I + +VND +P Y + EN LP
Sbjct: 2262 DREKKPSYSLTVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPYSVNVPENLEK-LP 2320
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
I+Q+ A D D + +++Y + GN + F +
Sbjct: 2321 KLILQVVARDDDQGLNSKLTYLLVGGNEDGAFTL 2354
>gi|432930271|ref|XP_004081405.1| PREDICTED: cadherin-20-like [Oryzias latipes]
Length = 730
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
S GD+ QR+ ++ + + + LT P + +++Q++NDN P LD
Sbjct: 38 STGDIHAIQRLDREVKS---QYVLRAQARNRLTDMPLEPESEFIVKIQDINDNEPKFLDG 94
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
Y A + E P++QL A+D D DP R+ Y I G P YF++D +G
Sbjct: 95 PYQATVPEMSKVGTPVIQLTATDAD-DPTYGNSARVVYSILEGQP--YFSVDAKTG 147
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 34/162 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGS-- 56
LD Y A + E P++QL A+D D DP R+ Y I G P YF++D +
Sbjct: 92 LDGPYQATVPEMSKVGTPVIQLTATDAD-DPTYGNSARVVYSILEGQP--YFSVDAKTGM 148
Query: 57 ------DLTGGPDQVYLIVY-------------------IQVQNVNDNVPMTLDPVYYAQ 91
D+ + Y +V I + +VNDN P+ +Y
Sbjct: 149 VRVSLADMDRETRENYTVVIQAKDMGGQLGGLAGTTTINITLSDVNDNAPVFDQRLYQMS 208
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++E+ + ++ A D D+ + + Y+I G+ F+I
Sbjct: 209 VLESAPMGSVVGRIWAKDRDVGVNAEMKYRIIDGDGRDTFDI 250
>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial [Apis
florea]
Length = 2820
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 47 ESYFNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
ES ++ + T GPD + Y+ + ++V + NDN P+ Y A ++E +V+
Sbjct: 1645 ESSKHVLTVAARTSGPDPLEAYVKLVVRVSDANDNPPVFTQTQYSATVLEGNVKGDFVVK 1704
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L+ASD D + R+ Y I GNP++ F I
Sbjct: 1705 LSASDADQGMNGRVLYHIVDGNPDNAFTI 1733
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISA 124
+ V + V++ NDN P + V+ I EN + + L A+D DL P + Y+I++
Sbjct: 2075 VTVIVTVEDANDNYPRFTEDVHQVSIKENAARGATVAVLRANDEDLAGTPAATLVYEITS 2134
Query: 125 GNPESYFNIDIGSGSL 140
GN F +D +G++
Sbjct: 2135 GNDGGLFRVDRSTGAV 2150
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPES------------------------YFNIDIGSDLT 59
+ A+D D + ++Y ++AG ES Y I + +
Sbjct: 1 VRATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAPYLEIPVIATDR 60
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL-PIVQLAASDGDLDPDQRI 118
GG V IV +QV +VNDN P+ +P Y ++ + I I+++ A+D D ++
Sbjct: 61 GGLSTV-AIVRVQVTDVNDNRPI-FEPRRYNATLKADNTIQGAILRVVATDLDAGLFGQV 118
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
+Y+I++GN F ID +G +
Sbjct: 119 AYRITSGNEAGVFQIDRNTGEV 140
>gi|297295313|ref|XP_001088244.2| PREDICTED: protocadherin gamma-B2-like [Macaca mulatta]
Length = 824
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 449 IIVTLHISDVNDNAPLFQQTCYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 508
Query: 127 PE-----SYFNIDIGSG 138
E SY ++ SG
Sbjct: 509 LEPREILSYVSVSAQSG 525
>gi|313236913|emb|CBY12162.1| unnamed protein product [Oikopleura dioica]
Length = 937
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 31/158 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY +I EN IVQ+ A D D + ISY+IS ++ F ID +
Sbjct: 454 VYNGEIAENNEIGDTIVQITAFDPDFGKNAEISYEIS--EYKNLFVIDPETADLKALVSF 511
Query: 57 DLTGGPDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D PD + + + ++++N+NDN P+ +P + EN+
Sbjct: 512 DAELFPDPISINIIATDNGSPRLSASTNFLLKIRNLNDNAPVFENPSSKISVKENKPIGT 571
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I QL+A+D DL+ + S+K S+F ID +G
Sbjct: 572 FITQLSATDADLNDEINYSFKTKT----SFFTIDSATG 605
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
E Y I D + + I +++VNDN P VY +I EN IVQ+
Sbjct: 414 EEYILTLIARDNGTSAQETLKSISITIEDVNDNAPSFKHDVYNGEIAENNEIGDTIVQIT 473
Query: 107 ASDGDLDPDQRISYKIS 123
A D D + ISY+IS
Sbjct: 474 AFDPDFGKNAEISYEIS 490
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDI--GSDLTGG-- 61
Y+ I EN+ + Q A+D D + I Y +++G +F+I++ G+ L+
Sbjct: 3378 YHGYIAENKPVGTNVFQAHATDKDSPKNAIIHYSFLASGTDHHFFSINVSNGTILSAASF 3437
Query: 62 ----------------PDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD + Y I+Y+ + VN+ P + PV++ + E + +
Sbjct: 3438 DYEERRTYMLQIKAKNPDSIMESYAILYVHILGVNEFYPQFVQPVFHFDVSETSAVGTAV 3497
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D+ D RI Y + + + F I+ +GSL
Sbjct: 3498 GSVQATDKDIGEDGRIYYLLVGSSNDRGFGINTNTGSL 3535
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------------------ 48
Y ++E LAASD DL + RISY+I GN +
Sbjct: 1068 YETSLLETTKVNTRFFALAASDSDLGANGRISYEIIDGNSDRKFGVFPDGYLFVRATLDR 1127
Query: 49 ----YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
Y+ + + G P + ++ V I V + NDN P + + I EN +
Sbjct: 1128 EERDYYALTVSCSDAGTPSRSSVVPVVIHVIDENDNAPQFTNSTFTFNIPENAPADTFVG 1187
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+L A D D+ + +S+ +SA + + F ID +G
Sbjct: 1188 KLTAVDRDIGRNAELSFTVSAQSVD--FKIDTHNG 1220
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+ ++A+D D P+ + Y IS GN FN++ +
Sbjct: 3287 ILTVSATDKDNGPNGMLHYAISGGNERRDFNVNERTGAITIMQPLDYDLMQEYHLNITVE 3346
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL P ++ I + +VNDN P+ Y+ I EN+ + Q A+D D +
Sbjct: 3347 DLGYKPLSAVAMLSIILTDVNDNPPIFNQSEYHGYIAENKPVGTNVFQAHATDKDSPKNA 3406
Query: 117 RISYK-ISAGNPESYFNIDIGSGSL 140
I Y +++G +F+I++ +G++
Sbjct: 3407 IIHYSFLASGTDHHFFSINVSNGTI 3431
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 25/132 (18%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSDLTGG 61
A D D + RISY + NP+ F I+ + +D
Sbjct: 983 ARDRDAGVNSRISYNFTY-NPDQQFRINSATGVIYLQKPIRADPGSVLYVEIMATDGGSP 1041
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P L + +Q+ +VND+ P+ Y ++E LAASD DL + RISY+
Sbjct: 1042 PLSSRLSLPVQIADVNDHTPVFDHTSYETSLLETTKVNTRFFALAASDSDLGANGRISYE 1101
Query: 122 ISAGNPESYFNI 133
I GN + F +
Sbjct: 1102 IIDGNSDRKFGV 1113
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 28/156 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
++E +++ ASD D + ++ + I+AGN F+ID
Sbjct: 1413 VLETSPSGTELMRFRASDADQGVNSQVVFSITAGNRRDTFHIDSVSGSLYLHKSLDYEDI 1472
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
SD P ++ + V + NDN P+ L QI E + PIV +
Sbjct: 1473 TNYTLNITASDCGTPPLSTTVLYNVIVVDDNDNPPIFLSTAIVRQIKEGIALKTPIVTVI 1532
Query: 107 ASDGDLDPDQRISYKISAGNPE----SYFNIDIGSG 138
A D D + +++Y IS PE +F I+ +G
Sbjct: 1533 ADDPDSGLNGKVTYVISRQEPELQGGRHFGINTLTG 1568
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ IG+ TG P Q V I + ++NDN P I EN+ I+ LA
Sbjct: 3654 AHYNLVIGAIDTGLPPQTGTATVRIDLDDINDNGPTFTAEGLLGYISENEPAGTTIMTLA 3713
Query: 107 ASDGDLDPDQR--ISYKISAGNPESYFNIDIGSG 138
ASD DL P+ SY+I G +S +ID +G
Sbjct: 3714 ASDPDL-PENGGPFSYRIVGGKHKSLLSIDKYTG 3746
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
LD + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 213 LDNKFRLVTTTNPSGDTSYLHLETT-GNLDRESRGSYQL-----------NISASDGGSP 260
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
++ +L V + + +VNDN P+ Y + E P++Q+ ASD DL + +++Y
Sbjct: 261 PRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNETVMPGSPVLQVMASDNDLGDNSKLTYY 320
Query: 122 ISAGNPESYFNIDIGSG 138
++ E F +D +G
Sbjct: 321 LA--ETEHQFTVDPETG 335
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV++ NDN P+ + VY I EN + ++ A D DL + +ISY + +
Sbjct: 1941 VIIQVEDTNDNPPVFEESVYSFDIPENAPRGYQVGEIVAKDADLAQNAQISYAVISDWAN 2000
Query: 129 SYFNIDIGSGSL 140
F+++ +G+L
Sbjct: 2001 DVFSLNPQTGAL 2012
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 48 SYFNIDIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S +N+ + + G P++ +LI I V +VND+ P+ Y A + E +
Sbjct: 477 SKYNLTVVAIDKGTPERKAIAHLI--INVNDVNDHEPVFEKSEYSAVLSELAPTGSFVAS 534
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+AA+D D + ++ Y+I GN +FNID +G
Sbjct: 535 IAATDEDTGVNAQVYYEILTGNELKWFNIDPATG 568
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P VY+ + ++NDN P P +Y ++ + + ++ + A+D D + I+Y
Sbjct: 705 APQSATATVYLSIADINDNNP-EFYPKHYIYTLKENNMLRSLLNVTATDRDDGDNALITY 763
Query: 121 KISAGNPESYFNIDIGSGSL 140
+ +G +++F+ID SGS+
Sbjct: 764 NLESGG-DNHFHIDSRSGSV 782
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 77 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
NDN P ++E +++ ASD D + ++ + I+AGN F+ID
Sbjct: 1398 NDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGVNSQVVFSITAGNRRDTFHIDSV 1457
Query: 137 SGSL 140
SGSL
Sbjct: 1458 SGSL 1461
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I++ + NDN+P+ DP Y A + EN S ++Q++A+D D + R+ Y I G+
Sbjct: 2304 IKILDENDNIPV-FDPKQYSASVAENASIGAMVLQVSATDEDEGDNGRVRYSIVTGDQNR 2362
Query: 130 YFNIDIGSG 138
F+I +G
Sbjct: 2363 DFSISEDTG 2371
>gi|291231670|ref|XP_002735781.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2902
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
I+ + A+D D + + R++YK ++GN ++ + LT
Sbjct: 2247 ILTILATDVDANENGRLTYKFTSGNNGTFAIVPTSGVLTVALPLDRETTASHSLHVTVSD 2306
Query: 60 GGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G Q++ V + + + NDNVP +Y ++EN + + + A+D D+ + R
Sbjct: 2307 NGNVQLFAEASVTLTISDANDNVPQFSQNIYTFYVLENSPFLSLVGNVLATDRDVGSNSR 2366
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I+Y I++G P +F +DI +GS+
Sbjct: 2367 INYTIASG-PHDHFILDIVTGSI 2388
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLT-----------GG 61
A+ D + D I+YKI AGN + F +D + ++T GG
Sbjct: 1932 FASDDDGIGSDGNITYKIVAGNADGKFAVDRYSGDILIQSQLDHEITDQYILEITAIDGG 1991
Query: 62 PDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
+ + + +++++VNDN P+ +Y I+E+ ++ + A+D D + I
Sbjct: 1992 STSLTGTMTLTVKIEDVNDNTPIFTHDIYTTTILEHMGIGTSVLTVKATDIDSGANAIIE 2051
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I+ G +F+ID +G +
Sbjct: 2052 YSITKGMSHEHFSIDRVTGEI 2072
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--GSDLT---- 59
+Y ++EN + + + A+D D+ + RI+Y I++G P +F +DI GS T
Sbjct: 2336 IYTFYVLENSPFLSLVGNVLATDRDVGSNSRINYTIASG-PHDHFILDIVTGSISTSADI 2394
Query: 60 -----------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + + V I V++ NDN P+ + Y I E+
Sbjct: 2395 DRENIESYSYNVKATDNGTPSRYNFTSVVIVVEDENDNYPVFNEDEYSVTIAEDHDVNAY 2454
Query: 102 IVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
++ + A+D D + ++Y + P + YF+ID +G +
Sbjct: 2455 VLTVDATDADNGTNAELTYSFHSSFPVGDEYFSIDGSTGEI 2495
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y I+E+ ++ + A+D D + I Y I+ G +F+ID +DL
Sbjct: 2019 IYTTTILEHMGIGTSVLTVKATDIDSGANAIIEYSITKGMSHEHFSIDRVTGEIMTTADL 2078
Query: 59 TGGPDQVY-----------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Y V I + +VNDN P+ I E+ +
Sbjct: 2079 DFETRSIYSFKVKASDGGIPMRSSDAFVRIIIDDVNDNHPVIFPHFKTVAISEHSASNTL 2138
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ D D + IS+ + +G+P F ID G++
Sbjct: 2139 VIPQWTLDDDSGKNGNISFSLVSGDPLGQFYIDTWGGTI 2177
>gi|432092385|gb|ELK25000.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Myotis davidii]
Length = 1240
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSDLTGG---- 61
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S +
Sbjct: 461 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRSVRRL 520
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 521 DREARPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 580
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D P+ + Y+I GN F +DI SG L
Sbjct: 581 VAQITAADPDEGPNAHVMYQIVEGNIPELFQMDIFSGEL 619
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + V+I V + NDN P + Y AQ+ E+ ++++ A+D D D + + Y
Sbjct: 18 GPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHY 77
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN +F ID +G +
Sbjct: 78 NIISGNSRGHFAIDSLTGEI 97
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 45 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 101
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND+ P+ + + ++EN
Sbjct: 102 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPL 161
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 162 GHSVIHIQAVDADHGENARLEYALTGVAPDTPFVINSATG 201
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 358 YSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDHLPQFRIDADSGAITLQAPLDYE 417
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 418 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 477
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 478 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 512
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A+D D P+ + Y+I GN F +DI S DL Q Y+I
Sbjct: 581 VAQITAADPDEGPNAHVMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 640
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 641 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGVIGRIPAYDPDV--S 698
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y GN ++ SG L
Sbjct: 699 DRLFYSFERGNELQLLVVNQTSGEL 723
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 256 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGAGLVTLALP 313
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 314 LDYKQERYFKLVLTASDRALQDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPVGST 371
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 372 VVVISASDDDVGENARITYLLEDHLPQ--FRIDADSGAI 408
>gi|355709597|gb|AES03644.1| protocadherin gamma subfamily B, 7 [Mustela putorius furo]
Length = 236
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + +VNDN P+
Sbjct: 64 TDGALDREQTPEYNVTI----------TATDRGKPPLSSSTTITLHITDVNDNAPVFHQA 113
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 114 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIIASDLEPRALASYVSVSAQSG 170
>gi|431903390|gb|ELK09342.1| Protocadherin-16 [Pteropus alecto]
Length = 2532
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y+ + E+ ++ +
Sbjct: 1875 TQYNLTVAAADRGQPPRSTAVPVTVTVLDVNDNPPVFTRTSYHVAVPEDTPVGAELLYVE 1934
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD DL P +S+ +S+G+P F ++ SG+L
Sbjct: 1935 ASDADLGPHGLVSFTLSSGDPSGLFELEESSGAL 1968
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 1462 AFSVLTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 1521
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 1522 SQPARGLFHVD 1532
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1005 LDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAH 1064
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1065 LSLEVPEGQDPQT-LTTLRASDPDVGANGQLQYRIVDGDPSGAFVLDLVSGEFG 1117
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + + V+++NDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 1663 GPHEGHANLTVLVEDINDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGHISY 1722
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F +D +G+L
Sbjct: 1723 HLA--SPAEGFRVDPNNGTL 1740
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + + V + V + NDN P Y A + ++++ A D D P R+S
Sbjct: 79 GGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSPPGTAVLRVRAHDPDQGPHGRLS 138
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I AGN F +D SG L
Sbjct: 139 YHILAGNSPQLFALDEHSGLL 159
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNP-----------------------ESYFNIDIGSD 57
+ L ASD D+ + ++ Y+I G+P E F + I +
Sbjct: 1078 LTTLRASDPDVGANGQLQYRIVDGDPSGAFVLDLVSGEFGTMRPLDREVEPAFQLRIEAQ 1137
Query: 58 LTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P L+V + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1138 DGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANG 1197
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y + AG F ++ SG L
Sbjct: 1198 HVTYYLGAGA-AGAFLLEPSSGEL 1220
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
++ E+Q + + A D DL R++Y+++AG + YF +
Sbjct: 862 RLPEDQPPGPAALHVVARDPDLGEAARVTYRLAAGG-DGYFRLHSSTGALSVVRPLDREQ 920
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ SD P ++ + V +VND P Y + EN ++ L
Sbjct: 921 RAEHILTVVASDHGSPPRSATQLLSVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTL 980
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D DL + +++Y +G F++D +G L
Sbjct: 981 QATDSDLGSNGQVTYGGISGE---SFSLDPDTGVL 1012
>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + +VNDN P L YY Q+VEN + + QL ASD D + ++ + I GN +
Sbjct: 211 VRITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSD 270
Query: 129 SYFNIDIGSG 138
F+ID +G
Sbjct: 271 GKFSIDQNTG 280
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
YY Q+VEN + + QL ASD D + ++ + I GN + F+ID + + +
Sbjct: 230 YYVQLVENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKFSIDQNTGVVTTNKSLD 289
Query: 66 ------YLIV-------------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
Y +V ++ V N+NDN P+ +Y A I EN +
Sbjct: 290 YEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASIDENTTVGH 349
Query: 101 PIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ A+D D ++ + Y I F +D +G L
Sbjct: 350 VILRVQATDRDHVNSSSILVYSILNTTSNGTFTVDPHTGVL 390
>gi|395820915|ref|XP_003783801.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Otolemur garnettii]
Length = 3351
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V + V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRVNVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YK-ISAGNPESYFNIDIGSG 138
Y I+A SYF+I + G
Sbjct: 598 YSIINASAFGSYFDISVYEG 617
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V +VNDN P+ L Y A + E+ IVQL A+D D R+ Y+I GN
Sbjct: 1088 VFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQLKATDADEGEFGRVWYRILHGNHG 1147
Query: 129 SYFNIDIGSGSL 140
+ F I + +G L
Sbjct: 1148 NNFRIHVSNGLL 1159
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1495 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1554
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +SY I+ GN + F +D SG +
Sbjct: 1555 GINSVLSYYITEGNEDMTFRMDRISGEI 1582
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++T P
Sbjct: 1530 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEITTRPAPP 1589
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN P+ Y + E I
Sbjct: 1590 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQSHYEVLLDEGPDTINR 1649
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D D P+ ++Y I AGN + F I+ +G L
Sbjct: 1650 SLVTIQALDLDEGPNGTVAYAIIAGNIINTFRINRHTGVL 1689
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I +A SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIINASAFGSYFDISVYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ + + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1812 AFYNLTLCARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENIPVSSFVAHIL 1871
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F+I+ +G
Sbjct: 1872 ASDADSGCNALLTFNITAGNRERAFSINATTG 1903
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V+I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 1052 YADVFIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 1111
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 1112 TENIQNIFDIDIYSG 1126
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+YI V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN
Sbjct: 335 IYISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAVDLDSAENGEVRYELKKGNG 393
Query: 128 ESYFNIDIGSGSLG 141
E F +D +G L
Sbjct: 394 E-LFKLDRKTGELS 406
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 1397 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLTVKAED 1456
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 1457 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 1516
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 1517 IHYFIMSGNEQGKFKMDSTTGDL 1539
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 1487 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 1546
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 1547 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKI 1606
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F++D +G++
Sbjct: 1607 LDVKATDEDSDVNGLVTYNIERGDNIGQFSVDPKNGTIS 1645
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 1071 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 1130
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 1131 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENAL 1190
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 1191 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 1225
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES----------------- 48
+Y I EN S I+++ A+D D + ++SY I + N ++
Sbjct: 554 IYNITIPENASFGTQILKINATDKDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLK 613
Query: 49 ---------YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQI----VE 94
Y +I + G P V+I V+++NDN P ++P Y+ ++ V
Sbjct: 614 TPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPSYFTKLSVAAVR 673
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q LP A D D+ + YKI GN ++I+ +G
Sbjct: 674 GQFVALP----KAYDKDISDTDSLEYKIVYGNELQTYSINKLTG 713
>gi|432090714|gb|ELK24053.1| Protocadherin Fat 3 [Myotis davidii]
Length = 1190
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 801 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 860
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 861 DLGNPQKSSWRLLTINVEDANDNSPIFLQDGYTVNILESSSIGTEIIQVEARDKDLGSNG 920
Query: 117 RISYKI 122
++Y +
Sbjct: 921 EVTYSV 926
>gi|432950056|ref|XP_004084367.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like,
partial [Oryzias latipes]
Length = 1528
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSDLTG---GP 62
Y A I EN ++ + A+DGD + + YKI + S F ID S L P
Sbjct: 363 YRASIRENVEVGFEVMTIRATDGDAPSNANMIYKIVNDDKVNSVFEIDARSGLVRVRERP 422
Query: 63 DQ-----------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ V+I V++ NDN P + Y AQ+ EN +
Sbjct: 423 DREARARYKLIVEANDRGKDPGALSATATVHISVEDENDNYPQFSEKRYVAQVPENVAVN 482
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+Q+ A D D + ++ Y I +GN + F I +G
Sbjct: 483 TKIIQVEAMDKDEGNNAKVHYSIVSGNVKGQFYIHSPTG 521
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------ESY---------- 49
Y + E+ ++Q++ASD D P+ R+SY G+ E Y
Sbjct: 887 YQGSVFEDAQVRTSVLQISASDRDSGPNGRVSYTFQGGDDGEGDFFIEPYSGIIRTARKL 946
Query: 50 ------------FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
F +D G+ P + + +++ VQ++NDN P+ + + EN
Sbjct: 947 DRENVPVYNLKAFAVDGGTR----PLKAAVSIHVVVQDINDNAPVFEKDELFIDVEENSP 1002
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + +I Y+I GN F +DI +G L
Sbjct: 1003 VGSIVAQITATDPDEGTNAQIMYQIVEGNFPEVFQLDIFTGEL 1045
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
M + + A ++EN + ++ + A DGD + R+ Y+++ +P F ++
Sbjct: 571 MFVSTPFQATVLENVAIGYSVIHIQAIDGDSGENARLEYRLTDTSPGFPFTVNNSTGWIT 630
Query: 54 IGSDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ +L + Y V I V +VNDNVP + Y +I N+
Sbjct: 631 VSEELDRETTEFYTFGVEARDHGVPVMSSSAAVSITVLDVNDNVPTFTEKTYSLKI--NE 688
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L + D D + ++Y+IS+GN + F I SG
Sbjct: 689 DALVGTSVLTVTAVDRDVNNVVAYQISSGNTRNRFAITSQSG 730
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 26/130 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 798 VAMISATDEDTGENARITYIMEDNIPQFKIDPDTGAITTQMEIDYEDHASYTIAIIAKDN 857
Query: 60 GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P D Y V I +++ NDN P L Y + E+ ++Q++ASD D P+
Sbjct: 858 GIPQKSDTTY--VEIIIEDANDNAPQFLRDRYQGSVFEDAQVRTSVLQISASDRDSGPNG 915
Query: 117 RISYKISAGN 126
R+SY G+
Sbjct: 916 RVSYTFQGGD 925
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------------- 50
Y AQ+ EN + I+Q+ A D D + ++ Y I +GN + F
Sbjct: 471 YVAQVPENVAVNTKIIQVEAMDKDEGNNAKVHYSIVSGNVKGQFYIHSPTGVIDVINPLD 530
Query: 51 -------NIDIGSDLTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
N+ I + G P + IV +QV +VNDN PM + + A ++EN +
Sbjct: 531 YEVIREYNLRIKAQDGGRPPLINGSGIVVVQVVDVNDNAPMFVSTPFQATVLENVAIGYS 590
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A DGD + R+ Y+++ +P F ++ +G
Sbjct: 591 VIHIQAIDGDSGENARLEYRLTDTSPGFPFTVNNSTG 627
>gi|410909484|ref|XP_003968220.1| PREDICTED: cadherin-20-like [Takifugu rubripes]
Length = 790
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
GD+ QR+ ++ A + + LT P + +++Q++NDN P LD Y
Sbjct: 102 GDIHAIQRLDREMKA---QYVLRAQARNRLTDRPLEPESEFIVKIQDINDNEPRFLDGPY 158
Query: 89 YAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSGSL 140
+A + E ++QL A+D D DP R+ Y I G P YF++D +G L
Sbjct: 159 WATVPEMSQIGTSVIQLTATDAD-DPTYGNSARVVYSILEGQP--YFSVDAKTGVL 211
>gi|240975974|ref|XP_002402238.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491127|gb|EEC00768.1| conserved hypothetical protein [Ixodes scapularis]
Length = 278
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNID----------- 53
Y+A + EN + ++++ A+D D + R+SY I+ + E+ F ID
Sbjct: 50 YFATVAENATVGASVLRVFATDADSAENGRVSYSINRRQSDRENMFAIDPDTGVISVNKP 109
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ D GG + ++ V + NDN P VYYA ++E
Sbjct: 110 LDFEAKDVHELVVVARD--GGDQPLETTAFLAVTDANDNAPQFDRDVYYANVLEVADPGT 167
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGSG 138
++QL+A+D D + + Y I P++Y F +D +G
Sbjct: 168 SVLQLSATDRDEGNNSLVRYSIR-DTPDTYSQWFRVDARTG 207
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-- 124
+ V I +Q+VNDN P+ Y+A + EN + ++++ A+D D + R+SY I+
Sbjct: 29 MTVNITIQDVNDNQPIFNQSRYFATVAENATVGASVLRVFATDADSAENGRVSYSINRRQ 88
Query: 125 GNPESYFNIDIGSG 138
+ E+ F ID +G
Sbjct: 89 SDRENMFAIDPDTG 102
>gi|402584472|gb|EJW78413.1| hypothetical protein WUBG_10678, partial [Wuchereria bancrofti]
Length = 400
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y IVY+ V +VNDN P+ P Y Q+ + ++ + A+D D+ + ISY
Sbjct: 179 PRSGYCIVYVNVLDVNDNPPIFRQPRYDVQLNGSVLSNATLLWVEATDADVGDNGLISYH 238
Query: 122 ISAGNPESYFNIDIGSGSL 140
++ NP YF ID +G++
Sbjct: 239 LTT-NPSEYFQIDRSTGAI 256
>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
jacchus]
Length = 4349
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVMVVAAHDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSRAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL ASD D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDASDPDSSSKGKLTFNITSGNHMGFFIIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKTMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVIDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPSSNVHELFAIDSESG 2855
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQSQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLRVQAIDPDSRDTSRLQYLILSGNQDRHF 2427
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY----------------------FNIDIGSDL 58
I++++A+D D D + +I+Y + + FN+ + +
Sbjct: 3030 ILKVSATDLDADTNAQITYSLHGPGAHEFKLDPHTGELTTLTPLDRERKDVFNLVVKAT- 3088
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG V + V++VNDN P + +N + P+ + A D D P+ ++
Sbjct: 3089 DGGGRSCQADVTLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDPDQGPNAQV 3148
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + E +F+ID +G
Sbjct: 3149 VYSL-PDSAEGHFSIDATTG 3167
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTIAAPLDYETTNFYILNVTVY 793
Query: 59 -TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 794 DLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDNG 853
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 854 RVRYTLLS--PTEKFSLHPLTGEL 875
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++Q++N+NDN PM + I ++ I+ ++A D +D Q + Y+I +GN
Sbjct: 550 VFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMSAID--VDELQNLKYEIVSGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|391333242|ref|XP_003741028.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Metaseiulus occidentalis]
Length = 2673
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 12 VENQSGILPIVQLAASDGD-----LDPDQ---RISYKISAGNPESYFNIDIGSDLTGGPD 63
EN ++ + SD D ++PD RI + N Y I D G P
Sbjct: 497 AENAKITYSLLTVDGSDSDTLPVYIEPDTGYIRIRTLLDHENRTDYKFFVIARD-NGKPQ 555
Query: 64 Q-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ V +QVQ+VNDN P YYA + E P++ + ASD D D RI Y I
Sbjct: 556 RSATATVVLQVQDVNDNDPTFEQKSYYATLSEKDPPGTPVITVHASDP--DKDSRIQYSI 613
Query: 123 SAGNPESYFNI 133
+GN F I
Sbjct: 614 PSGNHRDRFGI 624
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSDLT------ 59
Y A I E+ I+ A+D D + ISY + G + F ID S +
Sbjct: 257 YEASIRESSPVGSTILTARATDSDAGQNAVISYSLQVGFDATDIFAIDATSGVIYTKASL 316
Query: 60 ----------------GGPDQVYLI----VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P Q L +++ +Q+ NDN P + Y ++ EN S I
Sbjct: 317 DREKIPEYSIIIRAEDGAPVQKRLTSTAQLHLVIQDDNDNYPQFSERTYSVEVPENISWI 376
Query: 100 --LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I ++ A+D D + + + Y I GN + +F+ID +GS+
Sbjct: 377 DKPEITRIEATDADENENAALRYSIIGGNTQGHFSIDPLTGSI 419
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 30/142 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
YYA + E P++ + ASD D D RI Y I +GN
Sbjct: 581 YYATLSEKDPPGTPVITVHASDPD--KDSRIQYSIPSGNHRDRFGIISQNGNGIVSIAQP 638
Query: 47 -----ESYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
E+ F + I SD G D L YI V + N++ P + Y A + E+
Sbjct: 639 LDFKLENRFALTIQASDYGGRTDTATL--YINVTDANNHRPTFVKTPYTASVFEDIPVGT 696
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
++ + A D D+ + R++Y +
Sbjct: 697 TVLVIEAIDNDVGDNARVTYTL 718
>gi|410948521|ref|XP_003980983.1| PREDICTED: protocadherin gamma-B1-like [Felis catus]
Length = 811
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + + +VNDN P+ P Y I EN I Q++ASD DL P+ +SY I A + E
Sbjct: 437 ITVHIADVNDNAPIFEQPFYMVHIAENNPPGASIAQVSASDPDLGPNGHVSYSIVASDLE 496
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 497 PRALASYVSVSAQSG 511
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y + GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A + F +D
Sbjct: 588 YAVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVASL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + +VNDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGLNGTVRYSISAGD-RSRFQVNAQSG 743
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ + +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPVFMQALYKVEINENTLTGTDIIQVYAADGDEGTNGQVRYGIIDGNAN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGHL 848
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 31/131 (23%)
Query: 37 ISYKISAGNPESYFNIDIGSDLTGG---------------------------PDQVYLIV 69
+SY I++GN S F ID LTG P Y +
Sbjct: 2599 LSYYIASGNLGSTFQID---QLTGQVSISQPLDFEKIQKYVIWIEARDGGFPPLSSYEKL 2655
Query: 70 YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
+ V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+I GN E
Sbjct: 2656 DLTVLDVNDNSPVFREDPFVSEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNKEH 2714
Query: 130 YFNIDIGSGSL 140
F I+ +G +
Sbjct: 2715 SFTINHATGEI 2725
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y + GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGAVPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + + IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGADGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A I E+ S + ++A D D + I Y IS+GN E F I+ + +
Sbjct: 3096 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 60 -------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG Y V + V +VNDN P+ Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIVQGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ + ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + + +VNDNVP +Y+ I E+
Sbjct: 2323 DRETKAHFVLMVTATDSGSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASTNAVI--RIIGGN--SQFTINPSTGQI 2417
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGHLTTASVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN I Q A D D + + Y +
Sbjct: 874 TGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFAINEKNGNI 949
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 27/143 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E F I+
Sbjct: 2672 DP-FVSEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNKEHSFTINHATGEIRSIR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPR-FSQIFSAYVPENSPLG 2788
Query: 100 LPIVQLAASDGDLDPDQRISYKI 122
+ ++ SD D+D + Y I
Sbjct: 2789 YTVTRVTTSDEDIDINAISRYSI 2811
>gi|47212637|emb|CAF92949.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P V + V +VNDN P+ +Y A + E + ++Q+ A D D P+ +SY
Sbjct: 29 PLSAITTVNVNVTDVNDNAPVFGCQLYAAVVSEGAATGSSVIQVVAEDADSKPNGAVSYS 88
Query: 122 ISAGNPESYFNIDIGSG 138
I++GN + F+ID SG
Sbjct: 89 ITSGNQGNQFSIDPASG 105
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y A + E + ++Q+ A D D P+ +SY I++GN + F+ID S +
Sbjct: 54 LYAAVVSEGAATGSSVIQVVAEDADSKPNGAVSYSITSGNQGNQFSIDPASGIVRVNKDL 113
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P +V + + +VNDN P+ I EN+
Sbjct: 114 DREAIPSYSLAISARDGGIPPLSSTTMVNVDISDVNDNAPVFALEDSTVVIQENKPIGTS 173
Query: 102 IVQLAASDGD 111
I+Q + +DGD
Sbjct: 174 ILQFSVTDGD 183
>gi|405950339|gb|EKC18334.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1053
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYI-QVQ 74
+ +++S D+ P Q YK+ P S N+ + G P + +I QV
Sbjct: 385 VCSISSSFFDIKPLQSKGYKVVVKIPLDREKASEHNVTVSCHDLGTPPLYSSVSFIVQVG 444
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ NDN P+ L P Y+A I EN + + +++A+D D+D + +I Y + + S+
Sbjct: 445 DENDNKPVFLQPTYFASIEENNPVGVTVTKVSATDNDIDLNAQIQYVLHSDAGSSF 500
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
Y+ VY V + NDN P L P V + LPI ++ A D D +++++Y I
Sbjct: 645 AYVTVY--VMDANDNAPRILFPNKMNNTVSSTVTSLPITKIIAEDKDDGINRQLTYFIQT 702
Query: 125 GNPESYFNIDIGSGSL 140
GN ++ FN+ +G L
Sbjct: 703 GNDKNMFNLHSQTGEL 718
>gi|260828414|ref|XP_002609158.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
gi|229294513|gb|EEN65168.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
Length = 2847
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 30/160 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y I EN P++ + A+ D ++ Y I+ G+P + FNID
Sbjct: 921 PFYAVSIPENIQLHTPVINIKAASPD---GLKLIYSITDGDPFNQFNIDFDTGVINVVGS 977
Query: 55 --------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D G D ++V I VQ++ND P+ P Y A + E +
Sbjct: 978 LDYETKQNFRLTVRATDSRSGVD-AEVVVDITVQDINDVAPVFEKPSYEATLSEAAAIGT 1036
Query: 101 PIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
+++++A+D D +Q + Y+I N YF+ID SG
Sbjct: 1037 TVIKVSATDLDSGVNQLMYYQILQDESNSTDYFHIDTSSG 1076
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P P+Y A I E+ ++Q+ A+D D P+ +++Y I G+ +
Sbjct: 2146 VSINVTDVNDNAPEFSMPMYSASISEDAHTGDSVIQVMATDRDSPPNAQVTYTIVRGDSK 2205
Query: 129 SYFNI 133
FNI
Sbjct: 2206 GQFNI 2210
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLT--- 59
P Y A + E + +++++A+D D +Q + Y+I N YF+ID S L
Sbjct: 1022 PSYEATLSEAAAIGTTVIKVSATDLDSGVNQLMYYQILQDESNSTDYFHIDTSSGLILTA 1081
Query: 60 -------------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
GG +V++IV V ++NDN P P Y I E
Sbjct: 1082 RNLDHEKIEKHDFTVRVSDGGMPSLSSEVHVIV--TVLDLNDNAPQFDQPSYDCMISELA 1139
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +++ASD D + R+ Y I +GN + F ID +G
Sbjct: 1140 PRGHFVTKVSASDADSTDNNRLVYAIVSGNEQMNFVIDPKTG 1181
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 27/146 (18%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------------------- 58
+P+V +AA+D D + + + Y+I + YF+ID +
Sbjct: 524 IPLV-IAATDADNELNSLLVYEIIESAAQKYFSIDSNTGALRTIRTLDHEDIAEFRFTVQ 582
Query: 59 ---TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
TG P + V I+V +VND+ P +Y A ++ + IV + A D D
Sbjct: 583 VSDTGNPPLKAENPANVTIKVLDVNDSPPTCTQDIYEATLLLPTYKDVAIVTVEAEDADT 642
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
+ + ++SY ++ GN + F+I+ +G
Sbjct: 643 EANTQLSYVLTMGNEDKKFSINKDTG 668
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
Y Q+ E+ ++ ++ D D+ + +Y I+ G+P+ FNI+ G GP
Sbjct: 1663 TYQGQVREDALPGTIVITVSTRDADIGDNTIPTYYITGGDPQGQFNIERKTGKVYVNGPL 1722
Query: 63 ----DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
Q+Y++ V I VQ+VNDN P+ Y A I E+ + +++
Sbjct: 1723 DRETKQLYVLNITATDGAFTAMATVNIDVQDVNDNSPICEQSRYTASISEDITPQTFVME 1782
Query: 105 LAASDGDLDPDQRISYKIS 123
+ A DPDQ I +I+
Sbjct: 1783 VLAR----DPDQGIHSQIT 1797
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 60 GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P Q+ +V++ V +VND+ P Y Q+ E+ ++ ++ D D+ +
Sbjct: 1634 GEPKQLKDTTLVHVTVADVNDSPPTFRSSTYQGQVREDALPGTIVITVSTRDADIGDNTI 1693
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+Y I+ G+P+ FNI+ +G +
Sbjct: 1694 PTYYITGGDPQGQFNIERKTGKV 1716
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------- 56
Y++++ EN + + V + + G+L ++ + YKI NP + F + S
Sbjct: 718 YFSEVTENSTEV-KTVAIVTAVGNL-LNEPLEYKIL--NPNNMFEVSPTSGVLRTLGIPF 773
Query: 57 ---------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D P +++V++ + ++NDN P+ ++ YY+ + + P
Sbjct: 774 DREEKEKYEIVIEVRDKRSTPRVAHVVVFVTIADINDNAPVFVNLPYYSVVQVDAEPGTP 833
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + I Y + +G F I+ +G +
Sbjct: 834 VRTVTAVDKDAGKNSEIRYSLDSG-AHKRFRINRKTGQI 871
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 47 ESYFNIDIGSDLTGGPDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP-- 101
++ FN+ I + G P + YLI I V ++NDN P +A+ +N S P
Sbjct: 1930 QASFNLTIRATDEGAPRRSSTSYLI--ISVLDINDNPP----EFEFAEYAKNVSESTPIG 1983
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A D+ P+ I+Y+I +GN F I SG +
Sbjct: 1984 SQIINVYAVSKDVGPNAEITYEIISGNEHGKFEIGSYSGKI 2024
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ ND+ P+ Y + E + +VQ+ A+D D + ++Y I G
Sbjct: 4 FVRVVINVKDSNDHRPIFSAQEYTGGVYETAAYGTSVVQVVATDRDRGANSELTYTIETG 63
Query: 126 NPESYFNID 134
N + F+ID
Sbjct: 64 NVGNVFSID 72
>gi|402872838|ref|XP_003900306.1| PREDICTED: protocadherin gamma-B2 [Papio anubis]
Length = 824
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 449 IIVTLHISDVNDNAPLFQQTCYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 508
Query: 127 PE-----SYFNIDIGSG 138
E SY ++ SG
Sbjct: 509 LEPREILSYVSLSAQSG 525
>gi|195375851|ref|XP_002046712.1| GJ13033 [Drosophila virilis]
gi|194153870|gb|EDW69054.1| GJ13033 [Drosophila virilis]
Length = 1820
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
+T P+ ++VE + L Q++ G++ +R+ Y+ A + + F++ + ++
Sbjct: 973 VTEQPITSFELVEPKE--LEYFQISERTGEVILKKRLDYETLAESGSAEFDLQVRANSAD 1030
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQR 117
V I V+NVNDN P+ Y+A I+EN+ ++Q+ A D D D+R
Sbjct: 1031 RQRSTISRVNITVENVNDNSPIFEQSSYHATIIENKGHPERVLQVRAQDKDAALNARDER 1090
Query: 118 ISYK 121
+ Y
Sbjct: 1091 LGYH 1094
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNP 127
+ I V +VNDN P +Y A I EN + ++QL A+D D P I Y+ ++ G+
Sbjct: 1156 LLIDVLDVNDNAPEFTKKLYSAVIPENALKMENVLQLNATDADDGPGGEIRYELVNEGDA 1215
Query: 128 ESYFNIDIGSGSL 140
F+I+ SG L
Sbjct: 1216 NGLFSINAQSGLL 1228
>gi|443704241|gb|ELU01386.1| hypothetical protein CAPTEDRAFT_181060 [Capitella teleta]
Length = 2711
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNID-------- 53
L Y + E+ ++ L A+D D L ++ I Y I +G+ ES F +
Sbjct: 1865 LPSTYSTSVAEDTKAGSTLLTLTATDDDDLHVNKVIYYSIVSGDVESVFQVMGSTGEIVL 1924
Query: 54 ----------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+GSD P V I + ++NDN P+ VY+AQ+ E+ +
Sbjct: 1925 VGVLDRERRSKYNLVVMGSDRGEPPLNSTAPVTITILDINDNTPVFNSSVYHAQVPEDIA 1984
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IV+++A D D + R+ + I +GN ++ F ID +G
Sbjct: 1985 IDEDIVKVSAYDLDAGDNGRLHFNIDSGNDDNKFVIDRDTG 2025
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 71 IQVQNVNDNVPM--TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
I +++VNDN P+ T + VY ++E++ P++ + A+D D R+S+ I +GN
Sbjct: 919 IIIEDVNDNSPLFQTRNQVY---VLEDEPVGYPVMHIVATDADSQDGGRVSFDIVSGNDH 975
Query: 129 SYFNIDIGSGSL 140
S+F++D +G L
Sbjct: 976 SHFSLDSSTGLL 987
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y V++ +++ NDN P Y + E S + Q+ A+D D + R++Y I++G
Sbjct: 1538 YTTVWVNLKDSNDNAPKFTQQRYTSSTYEGNSRGTYVAQVIATDLDTGENGRVTYSITSG 1597
Query: 126 NPESYFNID 134
N + F ID
Sbjct: 1598 NTHNAFVID 1606
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------------SAGNPE- 47
Y A++ EN + ++++ A D D+ + ISY I +AG +
Sbjct: 1248 YTAEVFENIAVGTSVLRVQAVDADVGVNAEISYSINNAAQGQFSINNITGVLSTAGEFDR 1307
Query: 48 ---SYFNIDIGSDLTG--GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
++++ ++ + G GP + V + V+++NDN P+ Y +I ++ +
Sbjct: 1308 EKIAHYSFEVYATDGGLYGPRSESVRVEVTVKDINDNFPVFTQYPYRQEISQDLGVNQRV 1367
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q++A+D D D + RI Y S + +F ID +G
Sbjct: 1368 LQVSATDTDADDNGRIRYSFSTAS--QFFKIDSTTG 1401
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
I ++ + G++ +R+ ++++ + D+G G +Q + V ++VQ++NDN
Sbjct: 341 IFEVNSESGEISLKRRLDHEMTVRHEFMVHAYDLGP----GDNQASMTVIVEVQDINDNA 396
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ Y + E++ ++ ASD D + +I Y++ G F + G L
Sbjct: 397 PVFEFSSYVFDVSESRKANFKFGEVQASDADSGNNGKIRYQVQNGQNVDVFGVFADDGFL 456
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 69 VYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I V +VNDN P + V+ A I ENQ + Q+ A D D + I+Y G P
Sbjct: 591 VKIHVTDVNDNNPRFDKEGVFVAYINENQPADTLVAQITARDSDKGENASITYGFYEGGP 650
Query: 128 ES-----YFNIDIGSGSL 140
++ FN+D +G +
Sbjct: 651 DTNHDTAMFNLDTSNGRI 668
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 29/164 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES-----YFNIDIGSDLT- 59
V+ A I ENQ + Q+ A D D + I+Y G P++ FN+D +
Sbjct: 610 VFVAYINENQPADTLVAQITARDSDKGENASITYGFYEGGPDTNHDTAMFNLDTSNGRIT 669
Query: 60 ----------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P Q V + V++ N++ P Y I+EN
Sbjct: 670 TKEVLDHESKVQYVFKLLARDGGSPHRQTLKTVEVIVEDQNESPPQFDSAHTYFSILENT 729
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + + A D D + R++Y I GN F + +G++
Sbjct: 730 APGTIVGNVTAKDSDSGENARVTYYIVRGNLFGTFGVHSTTGAI 773
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS-DGDLDPDQRISYKISAGNP 127
V +QV +VN++ P L Y + E+ ++ L A+ D DL ++ I Y I +G+
Sbjct: 1850 VRVQVMDVNNHAPKFLPSTYSTSVAEDTKAGSTLLTLTATDDDDLHVNKVIYYSIVSGDV 1909
Query: 128 ESYFNIDIGSGSL 140
ES F + +G +
Sbjct: 1910 ESVFQVMGSTGEI 1922
>gi|270006422|gb|EFA02870.1| fat protein [Tribolium castaneum]
Length = 1781
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
++Q A+D DL + + + ISAGN + F++D I +
Sbjct: 1323 LIQFRATDADLGMNSEVVFSISAGNRKDTFHVDPSSGTLYLHKPLDYEELSAYQLNITAS 1382
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P I++ I V++ NDN P QI E S PIV + A D D +
Sbjct: 1383 DNGNPRLSTTILFAIAVEDANDNPPSFPSTAIVRQIREGISVHTPIVTVTADDPDYGING 1442
Query: 117 RISYKISAGNPE---SYFNIDIGSG 138
+++Y IS PE +F I+ +G
Sbjct: 1443 KVTYAISQQEPEDSNRHFGINPVTG 1467
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+V + +++VND+ P+ Y ++E+ LAASD DL + RISY IS GN
Sbjct: 970 LVRVVIEDVNDHTPVFDHTSYETSLLESTPVNERFFALAASDTDLGLNGRISYVISEGNT 1029
Query: 128 ESYFNI 133
E F I
Sbjct: 1030 EGKFGI 1035
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPES----------------------YFNIDIGSDLTGG 61
LAASD DL + RISY IS GN E Y+++ + + G
Sbjct: 1007 LAASDTDLGLNGRISYVISEGNTEGKFGIFPDGFLYVRQSLDREDKDYYSLSVTASDLGN 1066
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + ++ V I V + NDN P + + I EN+ + +L A+D D+ + + +
Sbjct: 1067 PSRSSVVPVVIHVIDENDNSPEFTNASFSFNIRENEPPDSFVGKLTATDRDIGRNAELIF 1126
Query: 121 KISAGNPESYFNIDIGSG 138
+S N +S F ID +G
Sbjct: 1127 SLS--NSQSDFVIDPKNG 1142
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y Q+ E +++L SD D + + Y I GN + F I+ + L
Sbjct: 1203 YRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSIVQGNDDGRFTIEEATGQIILSKILD 1262
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
YL+ V ++V + NDN P ++E
Sbjct: 1263 RETVSNYLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSKISVIETTPVNTE 1322
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q A+D DL + + + ISAGN + F++D SG+L
Sbjct: 1323 LIQFRATDADLGMNSEVVFSISAGNRKDTFHVDPSSGTL 1361
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLT----------------GGPDQV-YLIVY 70
DG+ D R++ ++ SY +++ L G P + YL V
Sbjct: 171 DGNKDDKFRLALTVNPAGETSYLHLETTGKLDRESQGFYFLNISARDGGAPPKFGYLQVN 230
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VNDN P+ Y + E+ P++Q+ A+D DL + +I+Y ++ + E
Sbjct: 231 VTILDVNDNPPIFDHSDYIVSLNESVLPGTPVLQVMATDNDLGDNAKITYYLA--DTERQ 288
Query: 131 FNIDIGSG 138
F +D +G
Sbjct: 289 FTVDPETG 296
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+V + VY V +VNDN P L Y Q+ E +++L SD D + + Y I
Sbjct: 1180 DKVKVNVY--VTDVNDNPPKFLRTPYRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSI 1237
Query: 123 SAGNPESYFNIDIGSGSL 140
GN + F I+ +G +
Sbjct: 1238 VQGNDDGRFTIEEATGQI 1255
>gi|191961806|ref|NP_001122136.1| desmocollin 3 precursor [Xenopus (Silurana) tropicalis]
gi|189441812|gb|AAI67620.1| LOC100135098 protein [Xenopus (Silurana) tropicalis]
Length = 908
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGN 126
V I V +VNDN P + Y ++ EN+SG++ I+ + +D DL P+ R Y I+ GN
Sbjct: 338 VSITVTDVNDNAPTFVQKSYQVEVNENESGMV-ILCIPITDSDLHDSPNWRAKYYITQGN 396
Query: 127 PESYFNI 133
+ YF+I
Sbjct: 397 EKGYFSI 403
>gi|301756110|ref|XP_002913894.1| PREDICTED: protocadherin-23-like [Ailuropoda melanoleuca]
Length = 3357
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT----- 59
+Y + EN IV +AA D D I Y I +GN + F++ S +LT
Sbjct: 2130 LYKGTVTENCDAGTSIVTVAAVAPDPIQDS-IKYSIFSGNEDGVFSLCSSSGELTVKEPK 2188
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y V + +Q+VNDN+P VY+ + E Q PI
Sbjct: 2189 FLDFEVRHEVRLIVLAESRGHRAYSKVAVLIQDVNDNLPCFEQSVYHVSVSEGQFHNAPI 2248
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D + Y I +GN F ID SG
Sbjct: 2249 IQVFAADPDSGMNGLPEYSILSGNQGEAFRIDTLSG 2284
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY+ + E Q PI+Q+ A+D D + Y I +GN F ID S
Sbjct: 2233 VYHVSVSEGQFHNAPIIQVFAADPDSGMNGLPEYSILSGNQGEAFRIDTLSGVITANALL 2292
Query: 57 --DLT------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT G P ++ IQV ++NDN P L ++ VE LP
Sbjct: 2293 DYELTSSYSLTVQATDKGMPRLSSTSVIKIQVTDINDNAPAFL----LSEAVEIAENSLP 2348
Query: 102 ---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q++ D DL+P ++ NP + F ID +G++
Sbjct: 2349 GVVVTQISVHDVDLNPAFIFNFA-KESNPGTKFAIDRNTGTV 2389
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P V I+V +VNDN P Y+A + E+ I ++A+D D+
Sbjct: 2623 LASDHGFPPLSSTATVAIEVLDVNDNPPKFHSLKYHAHVKESTPLGSHITVVSATDRDVG 2682
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F+++ +G L
Sbjct: 2683 SHAEIIYHIISGNEKGHFHLEETTGVL 2709
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
+Y A + ENQ+ + ++ A D D + + ++I G +F I D G +T
Sbjct: 1715 LYEASVKENQNPGQFVTRVEAMDRDSGINSKFQFEIMPGASSGFFKINPDTGVVVTTTAL 1774
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL 100
+V+ + + V++ ND+ P + P + +++ENQ G+
Sbjct: 1775 DREVREVFSLRVLVRDGGVPSLSSTATILCTVEDENDHAPEIIVPGHDIEVLENQEPGV- 1833
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D + + Y++ GN + YF I+ SG L
Sbjct: 1834 -VYTVLASDMDAGNNGAVRYRVIDGNTDGYFAINETSGEL 1872
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++VY+ V +VNDN P + + +++E Q + + + A D D +
Sbjct: 1260 PRNATMVVYVSVTDVNDNSPYFPQCLPGEELHVKVLEGQPVNMLVTTVFAKDFDEGNNAE 1319
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y +S+ + +F ID SG +
Sbjct: 1320 VVYSVSSEDSSDHFKIDANSGEI 1342
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP---- 62
A I E+ + + ++A D D + R++Y I +GN F +D S L T P
Sbjct: 1613 AHIKEDATVGSLVHHISAQDPDEGRNGRVTYSIISGNENMAFMLDKSSGLLTTTCPLDYE 1672
Query: 63 --DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
Q L + I V +VND P+ +Y A + ENQ+ + +
Sbjct: 1673 IKAQHILTLLALDDGIPALSSSQTLTITVLDVNDEAPVFQQKLYEASVKENQNPGQFVTR 1732
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + + ++I G +F I+ +G
Sbjct: 1733 VEAMDRDSGINSKFQFEIMPGASSGFFKINPDTG 1766
>gi|156399383|ref|XP_001638481.1| predicted protein [Nematostella vectensis]
gi|156225602|gb|EDO46418.1| predicted protein [Nematostella vectensis]
Length = 1888
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y + EN ++Q++A D D + R++Y F +D + L
Sbjct: 1369 PRYQGHVSENAPIGSSVLQVSARDRDSGENGRVTYSFVQDKDSDKFGLDENTGLVTTREE 1428
Query: 59 -----------------TGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + IV I + + NDN P+ + VY ++E+ + +
Sbjct: 1429 FDREAQGRYTLALKARDNGSPQKTTDTIVEIIITDENDNPPIFEEKVYNISVLESAASGM 1488
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++++A D D + R+SY IS GN F ++ G++
Sbjct: 1489 ELLKVSAVDRDFGVNARVSYYISEGNINGAFEVNREFGTI 1528
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--NIDIGS-DLTG 60
+ VY ++E+ + + +++++A D D + R+SY IS GN F N + G+ L G
Sbjct: 1473 EKVYNISVLESAASGMELLKVSAVDRDFGVNARVSYYISEGNINGAFEVNREFGTIRLAG 1532
Query: 61 GPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D+ + V + V ++NDN P Y + EN+ +
Sbjct: 1533 TLDRENVDHYKLTLTAKDGKYSGEATVNVYVLDINDNNPKFEKSHYRVNVSENRPAGTLV 1592
Query: 103 VQLAASDGDLDPDQRISYKIS 123
V+L ASD DL + Y IS
Sbjct: 1593 VKLRASDPDLGESGKFLYDIS 1613
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P Q+ S G + R+ +K + S F++ I ++ T P + + I +++VNDN
Sbjct: 1308 PRFQIRISKGIVWNSHRLDHKET-----SNFSLTIRAETTDPPMSAFANLKIFLEDVNDN 1362
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P + P Y + EN ++Q++A D D + R++Y F +D +G
Sbjct: 1363 PPEFVMPRYQGHVSENAPIGSSVLQVSARDRDSGENGRVTYSFVQDKDSDKFGLDENTG 1421
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
IQ+ +VNDN P+ PVY + EN G I Q AA D D + R++Y I
Sbjct: 315 IQLGDVNDNPPLFAQPVYKVFVRENLQGGHVIGQFAARDPDKGANARVTYSI 366
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 27/163 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNID-------- 53
PVY + EN G I Q AA D D + R++Y I ++ F+I
Sbjct: 330 PVYKVFVRENLQGGHVIGQFAARDPDKGANARVTYSIINFEDSRSDNLFSIHPFTGVLTA 389
Query: 54 ---------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I + TG P L + I V +VND+ P ++ +I N
Sbjct: 390 LSTLDREDLSRHILTIQAKDTGVPRMSGLAQIVIIVDDVNDHAPRFSSGSFHVEIPLNTP 449
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q A D D + + Y I GN + YF+I+ GSL
Sbjct: 450 PDSRVFQARALDPDGGHNGLVRYSIIQGNKQGYFSINHIDGSL 492
>gi|345311026|ref|XP_001519720.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
anatinus]
Length = 2269
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSD------- 57
VY + E + L++SD D D ++R++Y I+ G+P+ F ++ D
Sbjct: 1395 VYKGTVSEADPSGGVVAVLSSSDADADEMNRRVTYYITGGDPQGQFAVEQAQDEWRVFVQ 1454
Query: 58 ----------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
T G +V ++V + NDN P+ +Y I E+
Sbjct: 1455 RALDREEKDSYLLNVTATDGTFTAGAVVEVKVLDANDNSPVCDKTLYTETIPEDSLPGRL 1514
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I Q++A+D D+ + I+Y +S E+ FN+ +G L
Sbjct: 1515 ITQVSATDADIRTNAEITYTLSGPGAEN-FNLHPETGEL 1552
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V I+V +VNDN PM Y A + EN+ P+VQ+ ASD DL P+ ++ Y +
Sbjct: 1268 VSIRVGDVNDNSPMPEADPYAASVAENRPVGSPVVQVRASDPDLGPNGQVQYAL 1321
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 30/160 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-----------AGNPES---- 48
DP Y A + EN+ P+VQ+ ASD DL P+ ++ Y + A +P+S
Sbjct: 1285 DP-YAASVAENRPVGSPVVQVRASDPDLGPNGQVQYALDPAQDRAVLEAFAVHPDSGWLT 1343
Query: 49 -----------YFNIDIGSDLTGGPDQ--VYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
F + + + G ++ V + V + NDN P VY + E
Sbjct: 1344 TLRELDREERATFRVLVVASDCGERERRSSTATVEVTVADENDNPPRFSAEVYKGTVSEA 1403
Query: 96 QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID 134
+ L++SD D D ++R++Y I+ G+P+ F ++
Sbjct: 1404 DPSGGVVAVLSSSDADADEMNRRVTYYITGGDPQGQFAVE 1443
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 4 DPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT 59
D Y + + S LP I Q++A+D D+ + I+Y +S E++ + + G T
Sbjct: 1497 DKTLYTETIPEDS--LPGRLITQVSATDADIRTNAEITYTLSGPGAENFNLHPETGELKT 1554
Query: 60 GGP-----DQVYLI---------------VYIQVQNVNDNVPM-TLDPVYYAQIVENQSG 98
GP Y + V + + +VNDN P+ T DP + A + EN
Sbjct: 1555 FGPLDREQQATYNLLVTATDGGGRSCCASVQLWLDDVNDNAPVFTADP-FTATVFENTEP 1613
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ ++ A+D D + +I Y + +S+F++D SG
Sbjct: 1614 RTPLTRIQATDADTGLNGKIRYTL-VPPADSHFSVDADSG 1652
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + ND+ P Y Q+ E+ + ++Q+ A D D + + Y I +GN +
Sbjct: 17 VDVIDANDHAPWFTSASYEGQVYESAAVGSQVLQITALDRDQGENAEVQYSIESGNVGNA 76
Query: 131 FNIDIGSGSL 140
F ID GSL
Sbjct: 77 FTIDPVLGSL 86
>gi|339248645|ref|XP_003373310.1| cadherin-related hmr-1 [Trichinella spiralis]
gi|316970592|gb|EFV54502.1| cadherin-related hmr-1 [Trichinella spiralis]
Length = 2378
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 21 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIG------------------------ 55
+V + A D D P+ + I+YKI G+ F ID
Sbjct: 822 LVTVVAKDNDEKPEFKDITYKILPGSASHLFRIDSKLGAIYAVQSFDRELNDSFVLDVQA 881
Query: 56 -----SDLTG--GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
SDL G GP++ V I VQ++NDN P + VY ++ EN ++ + A
Sbjct: 882 EDNAPSDLPGARGPNRDITKVQILVQDINDNAPYFNETVYRGRVRENSEVGQNVMTVKAH 941
Query: 109 DGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
DLD D + Y + S GN S F++ SG++
Sbjct: 942 --DLDKDSELRYSLDSRGNDGSAFSVGASSGTI 972
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
G + V IQ+ +VNDN P+ P+Y I E+ PI+Q++A D D + I Y
Sbjct: 222 GKKSTEVPVEIQITDVNDNAPVFTQPLYAISIKEDHPIGNPILQVSARDKDSGLNSEIEY 281
Query: 121 KISAGNPESYFNID 134
++ N F ID
Sbjct: 282 SLTDHN----FTID 291
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----------PESY----- 49
P+Y I E+ PI+Q++A D D + I Y ++ N P+
Sbjct: 247 PLYAISIKEDHPIGNPILQVSARDKDSGLNSEIEYSLTDHNFTIDNQGVISPKVRLDADQ 306
Query: 50 -------FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQ-IVENQSGIL 100
+ D+ + G P Q+ ++I+ +NVND P+ L Y + + E+ G
Sbjct: 307 TMQGFYIYKFDVIAKDRGNPAQMATSQIHIRTENVNDEAPIFLPTSMYTEYVAEDAEGNT 366
Query: 101 PIVQLAASDGDLDPDQ-RISYKISAGNPE----SYFNIDIGSG 138
PI + A LDPD+ ++ Y + S+F ID +G
Sbjct: 367 PIATIQA----LDPDRDQVKYAFLRNGEQSQFLSHFEIDRDTG 405
>gi|156361305|ref|XP_001625458.1| predicted protein [Nematostella vectensis]
gi|156212293|gb|EDO33358.1| predicted protein [Nematostella vectensis]
Length = 479
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DL 58
+Y A ++EN + +VQ+ A D D + R+ Y + N + N G D
Sbjct: 181 LYEAWVLENITAGQFVVQVKAKDADYQQNGRLVYSMVRNNSKFRVNETTGEIYLSESLDF 240
Query: 59 TGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
+ V+ I V + V +VNDNVP T D Y V S +
Sbjct: 241 EETKEYVFGIIASDSGVEPKSSSTSVRVIVMDVNDNVP-TFDRFLYKSTVRENSPVGTTA 299
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+++ A D D + +I Y I++GN + F+ID
Sbjct: 300 IKVQAIDTDTGSNAKIEYIIASGNTNNSFDID 331
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF------NIDIGSDLTGGPDQVYLI------ 68
I++L SD D + +++ ++ +G+P S F I I L Q+Y +
Sbjct: 90 ILRLTVSDNDTAENSQLNLRVVSGDPNSTFFLSNSGEISIARKLDYERLQMYNLTVVAWD 149
Query: 69 -------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
V I++++ NDN P+ +Y A ++EN + +VQ+ A D D +
Sbjct: 150 SGKPVLQSLKPANVVIRIRDDNDNQPVFSRDLYEAWVLENITAGQFVVQVKAKDADYQQN 209
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + N S F ++ +G +
Sbjct: 210 GRLVYSMVRNN--SKFRVNETTGEI 232
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 2 TLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
T D Y V S + +++ A D D + +I Y I++GN + F+ID
Sbjct: 279 TFDRFLYKSTVRENSPVGTTAIKVQAIDTDTGSNAKIEYIIASGNTNNSFDIDNHGFVTV 338
Query: 54 ---------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I + G P ++ V + +++ NDN P+ P Y+ ++ EN S
Sbjct: 339 NKAIDFETRKIYNLTIMARDCGDPVLTSIVSVVLLIEDENDNPPVFDLPYYFVRMYENVS 398
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+++ ASD D + I Y G F I+ +G
Sbjct: 399 IRADIIRVHASDSDSGFNSEIRYSFPVGFVVKPFAINANTG 439
>gi|410896278|ref|XP_003961626.1| PREDICTED: protocadherin-15-like [Takifugu rubripes]
Length = 1746
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
YF I SD P + L++ + V +V+DN P+ Y A + EN PI+QL A
Sbjct: 761 YFLIVEASDGATDPRRSRLMLSVTVLDVDDNSPIFTQQSYSASLAENSPKHTPILQLTAL 820
Query: 109 DGDLDPDQRISYKISAG--NPE--SYFNIDIGSGSL 140
D DL + ++Y+I + +PE F++D +G L
Sbjct: 821 DADLHSN--LTYRIRSEGVDPEILRLFHLDPATGEL 854
>gi|195118202|ref|XP_002003629.1| GI18018 [Drosophila mojavensis]
gi|193914204|gb|EDW13071.1| GI18018 [Drosophila mojavensis]
Length = 651
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 196 PAMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYL 255
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + + V I +Q+VNDN P+ Y+A +
Sbjct: 256 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 315
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D D + + Y I+ + E F ID +G++
Sbjct: 316 ENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDAHTGAV 364
>gi|348537988|ref|XP_003456474.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2929
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP 62
PVY + E++ ++ + A+D D + ++ Y+I++GN F++ ++G+ P
Sbjct: 1193 PVYEVSVEEDKEVGFVLITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQP 1252
Query: 63 -----DQVY--------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
+Q Y +V +QV N ND P+ Y+A ++E + + + I
Sbjct: 1253 LDYEMEQRYELRLVASDGKWENETLVVVQVVNRNDEAPVFSQTEYHAAVMEELTQLPVFI 1312
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++++A+D D + DQ + Y + F ID +G +
Sbjct: 1313 LEVSATDPDQEADQSALRYSLHGQGAGGEFTIDERTGRI 1351
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
+++ SGI+ + D +Q+ SY I + + + G G P+ V I
Sbjct: 1127 IDSHSGII------FTRASFDREQKASYLIEVQSQDGSESARQGQQ--GQPNTDTAYVRI 1178
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
V +VNDN P PVY + E++ ++ + A+D D + ++ Y+I++GN F
Sbjct: 1179 FVTDVNDNAPAFAQPVYEVSVEEDKEVGFVLITVTANDEDEGANAKLRYQITSGNTMGTF 1238
Query: 132 NIDIGSGSL 140
+++ G++
Sbjct: 1239 DVEPEVGTI 1247
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY- 120
P + VY+ V +VNDNVP L Y A + E + Q++A+D D I Y
Sbjct: 1054 PLASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAQMGTSVAQVSATDLDSGLHGMIHYV 1113
Query: 121 --KISAGNPESYFNIDIGSG 138
K +G+ + +F+ID SG
Sbjct: 1114 ILKDESGDSQ-FFSIDSHSG 1132
>gi|156383900|ref|XP_001633070.1| predicted protein [Nematostella vectensis]
gi|156220135|gb|EDO41007.1| predicted protein [Nematostella vectensis]
Length = 257
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y + E G I+Q+ A+D D D + +I Y I +G+ E F + + +
Sbjct: 14 YPVNVSERTPGGQGILQVTATDADSDENAKIQYSIVSGD-EGKFVVQ----------EAF 62
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ V++ V + ND P+ VY A + EN+ + ++ A D D+ + +++Y +
Sbjct: 63 VAVHVHVTDANDQPPVFTSLVYEANVTENERVGTMVTKVEAKDPDVMINSKMTYSLHGDM 122
Query: 127 PESYFNIDIGSGSL 140
YF ID SG +
Sbjct: 123 --GYFAIDGISGEI 134
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 692 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 751
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 752 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 811
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 812 IDKLQYSILSGNDHKHFVIDSATG 835
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 575 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 631
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 632 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 689
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 690 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 730
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 1639 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 1698
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 1699 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 1758
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 1759 HIHYSIIDGNQGSSFTID 1776
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 1312 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 1369
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 1370 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 1426
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 1427 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 1467
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 1185 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 1238
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 1606 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 1665
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 1666 GKFSIDSKTGAV 1677
>gi|444713161|gb|ELW54069.1| Protocadherin alpha-2 [Tupaia chinensis]
Length = 560
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+LTG L + IQV +VNDN P PVY +++EN +V+L ASD D +
Sbjct: 192 ELTG-----TLQILIQVLDVNDNEPSFAQPVYRVKLLENAPNGTLVVKLNASDADEGSNS 246
Query: 117 RISYKISA---GNPESYFNIDIGSGSL 140
I Y +S+ ++ F ID SG +
Sbjct: 247 EIVYSLSSDVYSTTQTKFKIDPSSGEI 273
>gi|268575352|ref|XP_002642655.1| C. briggsae CBR-CDH-3 protein [Caenorhabditis briggsae]
Length = 3207
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI--VY 70
E + P++ ++ DLD + ++Y I +GN S F ++ + G + +
Sbjct: 1656 EQKEASYPLIIGSSIAEDLDENSVVTYSILSGN-TSLFVVNSTTAKDSGFRSLSATSRIL 1714
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V++VNDN P P YY +I E+ + I+++ A+D DL+ + S+ P
Sbjct: 1715 IHVEDVNDNAPEFDQPSYYVKIKEDVQIGVKILRIQATDADLNSVLQYSWDSEGIIP--- 1771
Query: 131 FNIDIGSG 138
F ID+ +G
Sbjct: 1772 FRIDVATG 1779
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Q + I+V ++NDN P VY + EN SG I + A D D RI Y+
Sbjct: 1991 PLQAITKILIKVLDINDNSPRFSQQVYKFNVTEN-SGPTFIGHVIARDA--DSGSRIFYE 2047
Query: 122 ISAGNPESYFNI 133
I +G+P F I
Sbjct: 2048 IVSGDPNHEFVI 2059
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------NP 46
+++ +I E+ I+QL ASD D + + ++ S N
Sbjct: 2116 IFHVEIPEDVGIGKEIIQLTASDSDEISNHKFEFEGSGEVVPFRVEQETGRVFVNDTLNF 2175
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
E + I LT G + ++I +++VNDN P+ Y I +Q I +L
Sbjct: 2176 EKKTSYRIKVRLTDGAWLIETSLFINIKDVNDNFPIFEKSEY---IFVSQKNSSEIGKLH 2232
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D P+ +I+Y +++ +F I SG L
Sbjct: 2233 ATDLDSGPNGKITYSLTS----PFFRIHPDSGLL 2262
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--------------------- 45
Y A + E IV++ A+DG L I Y + + N
Sbjct: 3133 YLAPVPEKAGRGQKIVRVHATDGQLFGSNEIEYSLVSANLSSMFTIGTHDGWISLAKSLS 3192
Query: 46 --PESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P+S F +D+ + G P Q V ++V N + P Y + EN+ I
Sbjct: 3193 SPPQSRFELDVRATDRGAPPQFDQTRVTVEVTGENLHTPKFSANTYQVIVPENEPVGSTI 3252
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D+ P+ + Y IS GN F++D +G +
Sbjct: 3253 LTVGATDADVGPNGMLRYAISGGNELRKFSVDERTGGI 3290
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
++FN+ IG+ G P Q V I +++VNDN P I EN+ I+ LA
Sbjct: 3619 AHFNLVIGAIDMGLPPQTGSATVRIDLEDVNDNAPTFTREGLMGYISENEPSGTSIMTLA 3678
Query: 107 ASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
ASD DL + SYK+ G +S+ ++D SG
Sbjct: 3679 ASDPDLPRNGGPFSYKLVGGKHKSWLSVDRSSG 3711
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
Y + EN+ I+ + A+D D+ P+ + Y IS GN F++D + TGG
Sbjct: 3237 TYQVIVPENEPVGSTILTVGATDADVGPNGMLRYAISGGNELRKFSVD---ERTGGIVIR 3293
Query: 62 -----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P ++ I + +VNDN P+ Y+ + EN+
Sbjct: 3294 QPLDFDTTQEYHLNITVQDLGFQPLSAVAMLTIILTDVNDNPPVFAQKEYHGYLAENKPI 3353
Query: 99 ILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
+ Q A+D D + I Y + G +F+++ +GS+
Sbjct: 3354 GTFVFQAVATDKDSPRNAIIHYSFLPTGTDRHFFSVNSSTGSI 3396
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------DLT--------- 59
+++ ASD D + ++ + ISAGN F+ID + D+T
Sbjct: 1408 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDTNTGSLYLHKMLDYEDITSYALNITAS 1467
Query: 60 --GGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P ++Y + V + NDN P+ QI E PIV + A D D +
Sbjct: 1468 DCGTPLLSTTVLYNVVVVDANDNPPIFPSTAIVRQIKEGIGLKTPIVTVLADDPDSGLNG 1527
Query: 117 RISYKISAGNPE----SYFNIDIGSG 138
++SY IS PE +F I+ +G
Sbjct: 1528 KVSYAISKQEPELSGGRHFGINTETG 1553
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y+ I E S I + D D + + Y ++ GN F++D + L
Sbjct: 1288 YHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAGGNEAGQFSLDGATGQLTLARRLD 1347
Query: 60 GGPDQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + +V + V + NDN P ++E
Sbjct: 1348 RESQEAHHLVVVARDAALKDSLSANTTITIVVLDENDNAPEFTQSSSEVSVLETSPTGTE 1407
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ ASD D + ++ + ISAGN F+ID +GSL
Sbjct: 1408 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDTNTGSL 1446
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGS 56
+ VY I EN + Q+ A D DL + ++SY + + F+++ + S
Sbjct: 1925 ETVYSFDIPENAPRGYQVGQILAKDADLGQNAQVSYGVFSDWATDIFSLNPQTGMLTLTS 1984
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPV-YYAQIVENQSG 98
L Q Y++ +Y V ++NDN P+ DP+ Y +++ EN
Sbjct: 1985 RLDYEEVQHYILLVQAQDNGQPSLSTTITIYCNVLDLNDNAPI-FDPMSYSSEVFENAPI 2043
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ ++A D D + ++Y I+AG+ +S F ID
Sbjct: 2044 GKEVASVSAKDIDSGNNGLVAYSITAGDSDSEFEID 2079
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDLT 59
TL P +V + G ++G++ D+R S +IS+ GN Y ++
Sbjct: 1211 TLRPFDREALVRDSRG--------TAEGEVGGDERAS-RISSIEGN---YMILEATVSDN 1258
Query: 60 GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P D+V + V I +VNDN P+ L Y+ I E S I + D D +
Sbjct: 1259 GSPRLSDKVKVKVIIT--DVNDNAPVFLRAPYHVTISEGASEGTHITHVFTQDADEGLNG 1316
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y ++ GN F++D +G L
Sbjct: 1317 DVYYSLAGGNEAGQFSLDGATGQL 1340
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+D + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 210 VDNKFRLATTTNPSGDTSYLHLE-TKGNLDRESRGSYQL-----------NISARDGGSP 257
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
+ +L V + + +VNDN P+ Y + E P+V + ASD DL + +I+Y
Sbjct: 258 PRFGFLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYY 317
Query: 122 IS------AGNPES 129
++ A NPE+
Sbjct: 318 LAETEHQFAVNPET 331
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VND+ P+ Y A + E S + + A+DGD + + Y+I +GN +
Sbjct: 490 IDVNDVNDHEPVFEKSEYSAVLSELASKGSYVTSITATDGDTGVNAEVHYEILSGNELKW 549
Query: 131 FNID 134
F++D
Sbjct: 550 FSMD 553
>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
Length = 4349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSG 2434
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F I+ S +
Sbjct: 2382 PQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSGIISMFNL 2441
Query: 59 ------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2442 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKVI 2501
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
L A D D P I Y I F+I+
Sbjct: 2502 DLLAIDKDSGPYGTIDYTIINKLASEKFSIN 2532
>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
Length = 2240
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++VNDN P+ P Y+ + E+ I++L+ASD D+ + + ++I++GN E
Sbjct: 1769 VIIYVEDVNDNAPVFSHPEYHISVNESMPVGSVIMKLSASDEDIGVNSLLHFEITSGNTE 1828
Query: 129 SYFNIDIGSG 138
S F I+ +G
Sbjct: 1829 STFAIENSTG 1838
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSDLTG----- 60
Y + I+EN S +VQ+ AS+GD +Y + GN ID ++TG
Sbjct: 1005 YRSSIIENTSPGSIVVQIKASEGDEKSTSNFTYHLLPGGNGYEKLKID---EITGIITTK 1061
Query: 61 -------GPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
P+ V + VY++V++VNDN P+ + ++
Sbjct: 1062 ESLDREEFPELVVAVIAENINEPSRFDISTVYVEVEDVNDNRPIINKDSCHPIVIPENVH 1121
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +V + A+D D D + RI Y I GN FNI+ SG
Sbjct: 1122 MNNLVTIYATDRDSDLNARIVYSIVGGNDGEKFNINPQSG 1161
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP------------------ 62
+V + A+D D D + RI Y I GN FNI+ S L
Sbjct: 1125 LVTIYATDRDSDLNARIVYSIVGGNDGEKFNINPQSGLVSCKALDRESRSQYNLTILATD 1184
Query: 63 -------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
D LIV V + NDNVP VY +VE+ +++L A D D +
Sbjct: 1185 SGVSRLADSCNLIV--TVSDENDNVPKFQSDVYSIDVVEDARPGTTVLKLTADDFDEGRN 1242
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++Y I+ G + F++ +G +
Sbjct: 1243 GILTYSIAEG-ADGTFDVKPNTGEM 1266
>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
Full=Cadherin family member 8; AltName: Full=Multiple
epidermal growth factor-like domains protein 1;
Short=Multiple EGF-like domains protein 1; Flags:
Precursor
Length = 4349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSG 2434
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+Y I E+ ++QL A D D ++++ I++GN +F I + L Q+
Sbjct: 1141 VFYPSIQEDAPVGTSVLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLLSTAQQL 1200
Query: 66 -------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ V + + +VNDN P+ ++ ++ E S + P
Sbjct: 1201 DRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSP 1260
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +L ASD D + R++Y I + E+ F+ID+ +G
Sbjct: 1261 GPVYRLVASDLDEGLNGRVTYSIEDSDEEA-FSIDLVTG 1298
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F I+ S +
Sbjct: 2382 PQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSGIISMFNL 2441
Query: 59 ------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2442 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKVI 2501
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
L A D D P I Y I F+I+
Sbjct: 2502 DLLAIDKDSGPYGTIDYTIINKLASEKFSIN 2532
>gi|432910748|ref|XP_004078505.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3255
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+ D +Q+ SY I + +S + G D Y+ ++I +VNDN P P
Sbjct: 1459 TRASFDREQKASYLIEVQSQDSSESARPGQQGQPNTDTAYVRIFIT--DVNDNAPAFAQP 1516
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VY + E++ ++ + A+D D + ++ Y+I++GN F+++ G++
Sbjct: 1517 VYEVSVEEDKEVGFILITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTI 1570
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP 62
PVY + E++ ++ + A+D D + ++ Y+I++GN F++ ++G+ P
Sbjct: 1516 PVYEVSVEEDKEVGFILITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQP 1575
Query: 63 -----DQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
+Q Y + V + + N ND P+ Y+A + E + + + I
Sbjct: 1576 LDYEMEQRYELRLVASDGKWENETHVLVHMVNRNDEAPVFSQTEYHAAVTEELTQLPVFI 1635
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++++A+D D + DQ + Y + F ID +G +
Sbjct: 1636 LEVSATDPDQEADQTALRYSLHGQGAGGEFTIDEHTGRI 1674
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + VYI V +VNDNVP L Y A + E + Q++A+D D I Y
Sbjct: 1377 PLASFTTVYINVTDVNDNVPFFLSSTYEATVPEGAQVGTSVAQVSATDLDSGLHGMIHYT 1436
Query: 122 I---SAGNPESYFNIDIGSG 138
I +G+ + +F+ID SG
Sbjct: 1437 ILKDESGDSQ-FFSIDSASG 1455
>gi|442768496|gb|AGC70195.1| protocadherin-like protein, partial [Stylophora pistillata]
Length = 2608
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------ 54
M +P Y A+I E+ ++ ++A+D +ISYK GN E F I
Sbjct: 2422 MFKEPAYRARIAEDTLPGTTVLTVSAADDSGMNVAKISYKFKFGNSEGLFRIGRRSGIIK 2481
Query: 55 --GSDLTGGPDQVYLI----------------VYIQVQNVNDNVPMTLDPV-YYAQIVEN 95
S L ++ YL+ V I + +VNDN P+ DP Y ++ EN
Sbjct: 2482 VNKSGLDYESEKNYLMGVEARDESANKSVVVEVNITISDVNDNPPV-FDPSEYVKEVYEN 2540
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
S ++++ A+D D + R+ + I +GN + F I+ +G +
Sbjct: 2541 ISIGTTLLRVNATDKDSGANGRLVFSILSGNDKQSFRINSRTGEI 2585
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+ + IG+ G P+Q +++ V I V +VNDN P ++ + I E Q+ + + A
Sbjct: 1238 YTLSIGAKDHGNPNQSHVVFVTIHVLDVNDNSPRFVNNSIFVNIPEKQAIGTVVTTVTAK 1297
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D + ++ Y I GN F I+ SG
Sbjct: 1298 DEDTGNNGKVRYTIDQGNGGKVFEINETSG 1327
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY----------------------K 40
L+ Y A + E I++++A D D ++ ++Y K
Sbjct: 2324 LESSYQATLSEETDQGTSILKVSAEDRDDGSNRELTYAFVTSLDLFRLNTTSGVIYTAKK 2383
Query: 41 ISAGNPESYFNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I A + +S++ + + + G P Q +++V I++ + PM +P Y A+I E+
Sbjct: 2384 IEASDRDSFYFVLVSAVDRGVPQQHAFVMVQIRI----NRKPMFKEPAYRARIAEDTLPG 2439
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ ++A+D +ISYK GN E F I SG
Sbjct: 2440 TTVLTVSAADDSGMNVAKISYKFKFGNSEGLFRIGRRSG 2478
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +QR Y ++ SD P + +V I V +VNDN P+ +P YY
Sbjct: 173 LDREQRDLYSLTVS----------ASDGGTPPQTGFGLVNITVLDVNDNDPV-FNPKYYN 221
Query: 91 -QIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYF 131
+ EN PIV++ A+D D+ ++ Y + S +P+ +F
Sbjct: 222 PNVTENTKQFTPIVEVYATDKDIGTYGKVMYSVIHDSTSDPDGHF 266
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSG---ILPIVQLAASDGDLDPDQRIS 119
YL +++ + +VNDN P+ Q++E+ QS + + L +D D +Q ++
Sbjct: 2095 YLTLHVNLTDVNDNKPVFYPANISVQLLEDDGSQSSSFTVRSVANLTTTDKDSGKNQEVT 2154
Query: 120 YKISAGNPESYFNIDIGSGSL 140
YKI +GN + F I+ G L
Sbjct: 2155 YKIISGNVDDKFAINAQLGLL 2175
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 29/156 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKIS----------------------AGN--- 45
++E++ P++ + A D DL + ++ Y+I GN
Sbjct: 1494 VMEDEGFDYPVITITAIDNDLGSNAKVKYRIEHDENRDSFRKFALNAATGLLKLVGNLDH 1553
Query: 46 ---PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P+ NI + +D P + ++ + V +VNDN P ++ + ENQ P+
Sbjct: 1554 ETTPKYVLNISV-TDGGTPPQFSFQLLTVFVVDVNDNGPEFNQSLFLGNVSENQPVGTPV 1612
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ++Y I GN F ++ SG
Sbjct: 1613 MAVSAYDLDSGENGALTYSIPRGNVNQKFALNGSSG 1648
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNPESYFNIDIGS----- 56
V+ A + EN + +V A+D D+ + ++ Y IS A +++F ID +
Sbjct: 441 VFIAVVSENATIGTSVVVAHATDKDIGSNAKLVYNISYTSQATLYKTWFQIDQATGEIRT 500
Query: 57 ----DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D +L+ V + + + NDN P+ VY++ + EN +
Sbjct: 501 SARLDREKFARLEFLVTVTDSGVPALSANCTVIVNITDANDNDPIFTKAVYFSTVNENSA 560
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D + + Y ++ + F+ID +G L
Sbjct: 561 NNTSVLQVLANDIDSGINGIVHYSLATQHRRVPFSIDPNTGLL 603
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +P +++ +GI+ Q+ L+ +QR SY ++ +D
Sbjct: 1104 TFEPPSLEFAIDHNTGIIRTNQV------LNREQRSSYILTVK----------ANDHGTS 1147
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + V + VQ++NDN P P Y + E+ ++ + ASD D + I+Y
Sbjct: 1148 PRTDHTSVTVTVQDINDNAPTFKKPFYEKAVPEDIPVGSSVLTVEASDPDAGSNGMITY- 1206
Query: 122 ISAGNPESYFNIDIGSG 138
A NP F ID +G
Sbjct: 1207 FFASNP-GVFTIDARTG 1222
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG- 125
L ++I V +VNDN P+ + P ++E++ P++ + A D DL + ++ Y+I
Sbjct: 1470 LTIFIIVSDVNDNKPIFVSP-NETYVMEDEGFDYPVITITAIDNDLGSNAKVKYRIEHDE 1528
Query: 126 NPESY--FNIDIGSGSL 140
N +S+ F ++ +G L
Sbjct: 1529 NRDSFRKFALNAATGLL 1545
>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2555
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
PVY + E++ ++ + A+D D + ++ Y+I++GN F+++
Sbjct: 875 PVYEISVEEDKEVGFVVITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFIAQR 934
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI- 99
+ SD G + +V I V N ND P+ Y+A ++E + +
Sbjct: 935 LDYEQVQRYELRLVASD---GKWENQTMVVINVINQNDEAPLFTQTEYHASVMEELTELP 991
Query: 100 LPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+ +++++A+D D + DQR + Y + S F ID
Sbjct: 992 VLVLEVSATDPDQEADQRAVRYSLHGQGAGSEFTID 1027
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+ D +Q+ SY I + +S + G D Y+ V+ V +VNDN P P
Sbjct: 818 TRATFDREQKGSYLIEVQSQDSSESARPGQQGQPNTDTAYVRVF--VTDVNDNAPAFSQP 875
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VY + E++ ++ + A+D D + ++ Y+I++GN F+++ G++
Sbjct: 876 VYEISVEEDKEVGFVVITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTI 929
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTL 84
S G + P QR+ Y+ P + + + G P + + I++ NVND P+
Sbjct: 275 TSQGVVSPSQRLDYE----RPNHMYECTVVAVDKGTPPRTGTASIRIRMANVNDEAPVFS 330
Query: 85 DPVYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Y + E+ ++ IV DGD ++Y I+ GN +S F +D G
Sbjct: 331 QTIYKTFLSEDAGPETLVAIVHAKDPDGD-----GVTYAITGGNEDSNFELDNQKG 381
>gi|157113610|ref|XP_001652021.1| protocadherin [Aedes aegypti]
gi|108877667|gb|EAT41892.1| AAEL006534-PA, partial [Aedes aegypti]
Length = 1647
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+++ A+D DL + +I++ I+AGN F+ID I +
Sbjct: 1247 LIRFRATDMDLGVNSQITFSIAAGNRRDTFHIDPITGNLYLHKLLDYEDTQSYSLNITAS 1306
Query: 58 LTGGPDQVYLIVYI-QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P I+++ V + NDN P + QI E PIV + A D D P+
Sbjct: 1307 DGGNPRLSTTILFVVNVIDSNDNPPSFPNTAIVRQIREGIPIKTPIVTVTAEDPDSGPNG 1366
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
++SY+IS +PE+ +F I+ +G
Sbjct: 1367 KVSYEISNQDPENRNRHFGINPTTG 1391
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 45 NPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+P + N++I + G P V + +++VND+ P+ Y ++E+
Sbjct: 870 DPGTVLNLEITATDGGDPQLSTKSTVTVTIEDVNDHTPVFDHTSYETSLLESMPVNSRFF 929
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNI 133
LAASD D+ +QRISY I GN + F I
Sbjct: 930 ALAASDADIGLNQRISYAIIEGNVDGKFGI 959
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + + N SG + + L + G LD + R SY + +I + G P
Sbjct: 102 DEKFRLAVTTNPSGDVYYLHLETT-GKLDRETRGSYML-----------NISAKDGGTPP 149
Query: 64 QV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ YL V + + +VNDN P+ Y + E+ P++Q+ ASD DL + +I+Y +
Sbjct: 150 RFGYLQVNVTILDVNDNPPIFDHSDYIVSLNESVVPGTPVLQVMASDNDLGDNSKITYYL 209
Query: 123 SAGNPESYFNIDIGSG 138
S + E+ F +D +G
Sbjct: 210 S--DTETQFTVDPETG 223
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y QI E S ++++ +D D + + Y I+ GN + F ID + L D
Sbjct: 1127 YKVQISEGSSIGTQLIRVYTNDADEGLNGDVFYYIAEGNSDERFVIDDATGQITLAKALD 1186
Query: 64 QVYLIVY----------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + +Y I+V + ND+ P + I E S
Sbjct: 1187 RETVSMYKLTIVAHDASMQNRLSTSTTVTIEVLDENDDAPEFTQTLSQIAINETTSIGTE 1246
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ A+D DL + +I++ I+AGN F+ID +G+L
Sbjct: 1247 LIRFRATDMDLGVNSQITFSIAAGNRRDTFHIDPITGNL 1285
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGN----------------------PESYFNIDIGSDLTGG 61
LAASD D+ +QRISY I GN Y+++ I G
Sbjct: 931 LAASDADIGLNQRISYAIIEGNVDGKFGIFPDGFLYVKSALDREERDYYSLTITCTDEGE 990
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + + V + V + NDN P + + + EN+ + +L A D D+ + + Y
Sbjct: 991 PPRSSSVPVIVHVIDENDNPPQFTNSTFIFSVAENEPADTFVGKLTAVDRDIGRNAELIY 1050
Query: 121 KISAGNPESYFNIDIGSG 138
+S+ + F ID +G
Sbjct: 1051 MLSSKQED--FIIDSRNG 1066
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LT D+V + V+I +VNDN P + Y QI E S ++++ +D D +
Sbjct: 1099 LTRLRDKVKIKVFIT--DVNDNAPQFVRAPYKVQISEGSSIGTQLIRVYTNDADEGLNGD 1156
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I+ GN + F ID +G +
Sbjct: 1157 VFYYIAEGNSDERFVIDDATGQI 1179
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 7 YYAQIVENQSGILPIVQLA---ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
++ + +N G+ + ++ + LD ++ SY I I D P
Sbjct: 532 FHPSVEKNYPGVFHLDSISGQLTTKSSLDREKVASYNIQV----------IARDQGTPPQ 581
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
V + + + NDN P Y+ + E+ + PI+Q+ A+D D + ISY+I
Sbjct: 582 SSTATVQLNIDDTNDNNPEFYPKQYFLALAEDTAPGRPILQVKATDQDEGINAMISYEIV 641
Query: 124 AGNPESYFNIDIGSGSL 140
+G + F ID SG +
Sbjct: 642 SGG-DGLFVIDSTSGQI 657
>gi|291223028|ref|XP_002731514.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 3888
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
I+ + + +VNDN P+ + + A + E + LP++ L A+D D + + + I+AGN
Sbjct: 1920 ILRVNIDDVNDNHPLFDEASFVASLSETTTTGLPVLNLLATDPDDGSNAELLFAITAGND 1979
Query: 128 ESYFNIDIGSGSL 140
+S F ID SG +
Sbjct: 1980 DSVFEIDRISGEI 1992
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP 127
+ I++ +VNDN P + + EN + + + L A+D D+ P+ ++Y I+ GN
Sbjct: 437 IMIEIIDVNDNAPFFNQTAIFVNLKENVTVEVEVAILIATDLDVTSPNSDVNYNITDGNE 496
Query: 128 ESYFNIDIGSGSL 140
+ F+ID SG+L
Sbjct: 497 DKTFHIDAASGNL 509
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 39 YKISAGNPESYFNIDIGSDLTGGPDQV--------YLIVY---------------IQVQN 75
Y I A N + YFNID + + D + L+V+ I V +
Sbjct: 2909 YVILASNVDGYFNIDETTGVIRTSDMLDRETIADYTLVVHAESEDGMYFSTADVRIVVLD 2968
Query: 76 VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES--YFNI 133
NDN P+ + Y I+EN + ++Q+ ASD D ++ I Y I + + +FNI
Sbjct: 2969 TNDNTPVFANTSYSVDIIENLACGTSVLQVTASDKDSLLNRAIIYSIDQAHTTANEHFNI 3028
Query: 134 DIGSG 138
D +G
Sbjct: 3029 DSRAG 3033
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP 127
+ + ++++N P + EN + PI+ L A+D D+ P+ I YKI+AG
Sbjct: 1493 IVVTIKDINQYAPEFETSTVIVHVQENITAGEPIITLIATDYDVTSPNNDIRYKITAGEG 1552
Query: 128 ESYFNIDIGSGSL 140
FNI+ +G +
Sbjct: 1553 SDRFNINAATGEI 1565
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 30/157 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQ---RISYKISAGNPE---------------- 47
Y A+I EN S + ++ASDGD PD RI Y ++ G+P+
Sbjct: 137 YSAEIYENASVGGVFLTVSASDGD-HPDTGDGRIRYAVTGGDPDGQFRVGLYSGGISPRL 195
Query: 48 -------SYFNIDIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
S + I+I + G +++ + V I V +VNDN P V + EN
Sbjct: 196 ALDRETTSSYTIEITATDEGAIPRLFDVTNVSITVLDVNDNTPYCDHDVITVSVDENLPI 255
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 135
+ + L D D P+ + Y I GN F IDI
Sbjct: 256 LTNVTSLRCDDDDDGPNSDLVYSILKGNTVK-FRIDI 291
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD---QVYLIVYIQ-- 72
+ +L+ +DGD I YK+ AG ++F+ID S + D + Y +YI+
Sbjct: 2588 VAKLSCNDGDTGVGG-IEYKLVAGEGSNHFSIDPQSGAIKVAVALDYEVETYYSLYIEAA 2646
Query: 73 ----------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V +VNDN P+ + ++EN I ++AA D D P+
Sbjct: 2647 DHDIVSFTTSLNIPVTVIDVNDNWPLFILDTNTLSVMENVVPGTKIAKVAAYDVDSAPNA 2706
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I Y I +G+ E F ID SG
Sbjct: 2707 DIYYNIFSGDDEGQFEIDSLSG 2728
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 226 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 285
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 286 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 345
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 346 IDKLQYSILSGNDHKHFVIDSATG 369
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 109 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 165
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 166 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 223
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 224 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 264
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 1173 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 1232
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 1233 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 1292
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 1293 HIHYSIIDGNQGSSFTID 1310
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 719 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 772
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 846 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 903
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 904 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 960
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 961 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 1001
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 1140 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 1199
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 1200 GKFSIDSKTGAV 1211
>gi|161611532|gb|AAI55705.1| LOC100135098 protein [Xenopus (Silurana) tropicalis]
Length = 869
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGN 126
V I V +VNDN P + Y ++ EN+SG++ I+ + +D DL P+ R Y I+ GN
Sbjct: 338 VSITVTDVNDNAPTFVQKSYQVEVNENESGMV-ILCIPITDSDLHDSPNWRAKYYITQGN 396
Query: 127 PESYFNI 133
YF+I
Sbjct: 397 ERGYFSI 403
>gi|301621409|ref|XP_002940046.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A1-like
[Xenopus (Silurana) tropicalis]
Length = 937
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S ++I I D+ P ++ + V +VNDN P ++PVY + EN + ++
Sbjct: 419 SEYHITITAKDMGNPPLSTEKVISVVVSDVNDNAPQFVEPVYEVFVEENNKAGELLCTVS 478
Query: 107 ASDGDLDPDQRISYKISAGNPESY 130
ASD DLD + R+SY I E Y
Sbjct: 479 ASDPDLDQNSRLSYTIIQNPKEDY 502
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 36 RISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
R+ +++ + ++ I +D P + IQ+ ++NDNVP L YY Q+ E
Sbjct: 3058 RVLRRLNRESTDALVIIVTATDGGAPPRSTSQTITIQLTDINDNVPTFLSLAYYEQVGEL 3117
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++Q+ A D D++ + I Y + G SYFN++ +G+L
Sbjct: 3118 TPVNTTVLQVEAVDADINDNAAIEYLL-FGAAGSYFNLNSTTGTLA 3162
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTG---- 60
V Y + E+ G L I+ +D D + ISY I+ + F ID + +LT
Sbjct: 4443 VLYLEAAEDFVGELAIIT--GTDADEGANAVISYYIANSTAMARFAIDSVTGNLTCADLD 4500
Query: 61 ------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G + ++ + + V +VND P+ D Y + EN+ +
Sbjct: 4501 YEESIREMIIVGLTDGLPGSNDSFVTINVNVTDVNDEAPV-FDSTTYYDVFENEFDGAVV 4559
Query: 103 VQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSGSL 140
Q+ A D D + Y ++A N ++F +D +G L
Sbjct: 4560 AQVVAFDRDTGSGGVVRYALTAADNCTAFFTVDPVTGVL 4598
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 52 IDIGSDLTGG---PDQVYL---IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL--PIV 103
+ +GS++TG P + + ++ + V++ NDN P V Y +I ++S + P+
Sbjct: 5332 VTVGSNMTGAALTPCKGHCTDHVIVLNVEDANDNAPQF--AVAYQEITISESLTVGTPVA 5389
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ ASD D + + + ++ G S F ID SG L
Sbjct: 5390 QVNASDADSGVNAEVRFSVTMGG--SIFAIDAVSGVL 5424
>gi|410965846|ref|XP_003989451.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Felis catus]
Length = 2896
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP V+I V++ NDN P + Y Q+ E+ + P++++ ASD D + I Y
Sbjct: 290 GPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNTPVLRVQASDRDQGQNAAIHY 349
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN + F + SGSL
Sbjct: 350 SIVSGNLKGQFYLHSLSGSL 369
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ ASD D + I Y I +GN + F ++D+ + L
Sbjct: 317 YVVQVPEDVAVNTPVLRVQASDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 376
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 377 FEAIREYTLRIKAQDGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 436
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 437 VLHIQAVDADAGENARLRYRL 457
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VNDN PM PVY ++ E+ + ++ L A D D + I+Y+++ GN +
Sbjct: 529 ITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTRNR 586
Query: 131 FNIDIGSG 138
F + SG
Sbjct: 587 FALSSQSG 594
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 751 YQGSVFEDVPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 810
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P + V +QV ++NDN P+ + VE S +
Sbjct: 811 DRENVAVYNLRALAVDRGSPAPLSASVEVQVSVLDINDNPPV-FERDELELFVEENSPVG 869
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 870 SVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 910
>gi|338713596|ref|XP_001917799.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Equus
caballus]
Length = 835
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P + + + ++NDN P+
Sbjct: 406 TDGFLDREQTPEYNITI----------TATDRGKPPLSSSTTITLHIADINDNAPIFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 NYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 512
>gi|410948359|ref|XP_003980908.1| PREDICTED: protocadherin gamma-B7 [Felis catus]
Length = 810
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + +VNDN P+
Sbjct: 406 TDGPLDREQTPEYNVTI----------TATDRGIPPLSSSTTITLHITDVNDNTPIFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-- 128
++V +VNDN P+ + Y A + EN + P++++ A D D + R+SY +S G+ +
Sbjct: 2081 LEVSDVNDNAPVFEEAAYSAYVAENNAAGAPMLRVLARDPDAGSNGRVSYWLSGGSADAA 2140
Query: 129 SYFNIDIGSGSL 140
+Y +++ SG+L
Sbjct: 2141 AYVSVEARSGAL 2152
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S +NI I + +G P + +QV +VNDN P T Y ++EN +PI+ ++
Sbjct: 3475 SEYNITITARDSGSPPLSAVKQILVQVSDVNDNAPKTSQDSYDVYVLENNVPGIPILNIS 3534
Query: 107 ASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
A+D DL + +SY + AG+ F+I+ +G+L
Sbjct: 3535 ATDPDLGRNAHLSYSLLQAGH---IFSINRENGTL 3566
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++V +VNDN P+ + Y A + EN + P++++ A D D + R+SY + +G+ +
Sbjct: 1331 LEVSDVNDNAPVFEEAAYSAYVAENNAAGAPAPVLRVLAQDADSGANGRVSYWLESGSAD 1390
Query: 129 --SYFNIDIGSGSL 140
+Y +++ SG+L
Sbjct: 1391 AAAYVSVEARSGAL 1404
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P ++ ++I+V + NDN P+ Y A + EN + +++A D D P+
Sbjct: 3271 LDGGSPPRSAHVQIHIEVVDANDNAPVFNQSTYKASVRENTPSGTLVARISAYDLDDGPN 3330
Query: 116 QRISYKISAGNP---ESYFNIDIGSGSL 140
I Y S+ P F +D +G L
Sbjct: 3331 GDIVYSFSSHTPAKVRELFALDSATGEL 3358
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+++++V +VNDN P+ + Y A++ EN + ++++ A D D + R+ Y++S
Sbjct: 691 VLWLRVLDVNDNAPVFAEARYSARVPENNAEGALVLRVRAWDADWGQNARVRYELSG--- 747
Query: 128 ESYFNIDIGSGSLG 141
+ +F++ + +G G
Sbjct: 748 DEHFSLAVQTGPGG 761
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 36/58 (62%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+++++V +VNDN P+ + Y A++ EN + P++++ A D DL + + Y++ G
Sbjct: 2945 VLWLRVLDVNDNAPVFAEARYSARLPENNAVGAPVLRVRAWDTDLGQNVGVRYRLGEG 3002
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VYQGQVQENSPSGTQVMVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFIIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN +V L D D+ R ++ I+ G+P F I +G +
Sbjct: 2911 YRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2970
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P VY ++ E+ + P
Sbjct: 2971 TLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLVYTGKVHED---VFPG 3027
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3028 HFILKVSATDLDTDTNAQITYSLH-GPGAHEFKLDPHTGEL 3067
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + I ++ IV ++A D +D Q + Y+I +GN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSIHQDWPVGKSIVTMSAID--VDELQNLKYEIISGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VYQGQVQENSPSGTQVMVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFIIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN +V L D D+ R ++ I+ G+P F I +G +
Sbjct: 2911 YRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2970
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P VY ++ E+ + P
Sbjct: 2971 TLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLVYTGKVHED---VFPG 3027
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3028 HFILKVSATDLDTDTNAQITYSLH-GPGAHEFKLDPHTGEL 3067
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + I ++ IV ++A D +D Q + Y+I +GN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSIHQDWPVGKSIVTMSAID--VDELQNLKYEIISGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|262263253|tpg|DAA06630.1| TPA_inf: protocadherin gamma c7 isoform [Anolis carolinensis]
Length = 954
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I + +G P + V IQV +VNDN P P + A + EN S + L+AS
Sbjct: 421 YNITIKATDSGMPQKSTQKTVLIQVSDVNDNAPTFSIPSFTAHVEENISPGTLVFSLSAS 480
Query: 109 DGDLDPDQRISYKI----SAGNP-ESYFNIDIGSGSL 140
D D+ + ++SY I + G P +YF+I+ +GS+
Sbjct: 481 DPDVGVNSKLSYSIVDNGNHGLPISTYFHINQENGSI 517
>gi|229442269|gb|AAI72777.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 866
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 47 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 106
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 107 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 166
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 167 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSG 205
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDG--DLDPDQRISYKISAGNPES--YFNIDIGSDLT 59
DPV Y+ + G P + DG LDPD + + ES + ID+ +
Sbjct: 491 DPVIYSLV----RGTTP---ESNKDGVFSLDPDTGVIKVRKPMDHESTKLYQIDVMAHCL 543
Query: 60 GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
D V L+ V IQV +VNDN P+ Y A + EN ++Q+ A D D D ++
Sbjct: 544 QNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQV 603
Query: 119 SYKISA---GNPESYFNIDIGSG 138
SY++SA N F ID SG
Sbjct: 604 SYRLSADPGSNVHELFAIDSESG 626
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
V + V++VNDN P VY I E P++QL ASD D ++ +SY+I +
Sbjct: 29 VEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSD 88
Query: 127 PESYFNIDIGSGSL 140
+F I+ +G +
Sbjct: 89 VSKFFQINGSTGEM 102
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + VYI V +VNDNVP +Y A + E + Q++A+D DL + I+Y
Sbjct: 768 PLASFATVYINVTDVNDNVPFFTSSIYEASVTEGADVGTMVFQVSATDLDLGQNGEITYS 827
Query: 122 ISAGNPESY--FNIDIGSGSL 140
+ E Y F++D +GS+
Sbjct: 828 LLPDRSEDYTFFHLDSKTGSI 848
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+Q ++ ++A+D D + ++ Y+I+AGN F+++
Sbjct: 908 VYEVNVDEDQDVGSTVITVSANDEDEGTNAKLRYQITAGNTGGVFDVEPEMGAIFIARPL 967
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ SD G + Y IV I + N ND P+ YY ++E G+ +
Sbjct: 968 DYEETQLYELHLLASD---GKWEDYAIVIINIVNKNDEAPVFALNEYYGSVIEELDGLPV 1024
Query: 101 PIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D D I Y + + F ID +GS+
Sbjct: 1025 FVLQVVANDPDSALDGGDIRYSLHGLGADDVFAIDENTGSI 1065
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 34/169 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY--FNID--IGSDLT-- 59
+Y A + E + Q++A+D DL + I+Y + E Y F++D GS T
Sbjct: 793 IYEASVTEGADVGTMVFQVSATDLDLGQNGEITYSLLPDRSEDYTFFHLDSKTGSIYTAS 852
Query: 60 ----------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ 91
G P+ V + + +VNDN P VY
Sbjct: 853 VFDREKKASYLLEVKSTDGSESSRPGKHGQPNSDTAYVRVFISDVNDNKPSFTKNVYEVN 912
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+Q ++ ++A+D D + ++ Y+I+AGN F+++ G++
Sbjct: 913 VDEDQDVGSTVITVSANDEDEGTNAKLRYQITAGNTGGVFDVEPEMGAI 961
>gi|327270359|ref|XP_003219957.1| PREDICTED: protocadherin gamma-C5-like [Anolis carolinensis]
Length = 962
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I + +G P + V IQV +VNDN P P + A + EN S + L+AS
Sbjct: 421 YNITIKATDSGMPQKSTQKTVLIQVSDVNDNAPTFSIPSFTAHVEENISPGTLVFSLSAS 480
Query: 109 DGDLDPDQRISYKI----SAGNP-ESYFNIDIGSGSL 140
D D+ + ++SY I + G P +YF+I+ +GS+
Sbjct: 481 DPDVGVNSKLSYSIVDNGNHGLPISTYFHINQENGSI 517
>gi|31210749|ref|XP_314341.1| AGAP004850-PA [Anopheles gambiae str. PEST]
gi|30176549|gb|EAA09721.2| AGAP004850-PA [Anopheles gambiae str. PEST]
Length = 3543
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V + +Q+VNDN P T P YY A + E+Q P+ + A+D D D R+ Y
Sbjct: 793 PKSASTSVIVTIQDVNDNDP-TFSPKYYEAMLAEDQPPGTPVTTVTATDP--DEDSRLHY 849
Query: 121 KISAGNPESYFNIDIGSG 138
+I+AGN F I +G
Sbjct: 850 EITAGNTRGRFAITSQNG 867
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGN 126
V +++ + NDN P + Y Q+ E+Q I + ASD D + I Y I GN
Sbjct: 588 VLVKILDDNDNYPQFSERTYTVQVREDQWANENNVIAHIQASDADQGNNAAIRYAIIGGN 647
Query: 127 PESYFNIDIGSG 138
+S F+ID SG
Sbjct: 648 TQSQFSIDSMSG 659
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V I V +VNDN P+ P+Y A I E+ +VQ+AA+D D+ + R+ Y +
Sbjct: 1013 VEISVTDVNDNAPVFKVPLYQATIPEDALIGTSVVQIAATDLDMGLNGRVKYAL 1066
>gi|392341624|ref|XP_001078424.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
gi|392349660|ref|XP_001070474.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
Length = 3075
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y +I EN ++ + A+DGD + + Y++ G F ID S +
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSGVVRTRAVVD 431
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 432 REEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNT 491
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 492 PVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 531
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 479 YVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 538
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 539 FEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 598
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 599 VLHIQAVDADAGENARLQYRL 619
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 912 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 971
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P+ + V +QV ++NDN P+ + VE S +
Sbjct: 972 DRENVAVYNLWALAVDRGNPNPLSASVEVQVTVLDINDNPPV-FEKDELELFVEENSPVG 1030
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 1031 SVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 1071
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 688 VSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 745
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 746 NRFALSSQSG 755
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 809 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 868
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I Q+ NDN P L Y + E+ ++Q
Sbjct: 869 DQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 928
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 929 VSATDRDSGPNGRLLY 944
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VYQGQVQENSPSGTQVMVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFIIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPHYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN +V L D D+ R ++ I+ G+P F I +G +
Sbjct: 2911 YRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2970
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P VY ++ E+ + P
Sbjct: 2971 TLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLVYTGKVHED---VFPG 3027
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3028 HFILKVSATDLDTDTNAQITYSLH-GPGAHEFKLDPHTGEL 3067
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + I ++ IV ++A D +D Q + Y+I +GN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSIHQDWPVGKSIVTMSAID--VDELQNLKYEIISGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN +++L A+D D P+ I+Y I + + + F ID G+ T G
Sbjct: 3207 YFPNVLENAPSGTTVIRLNATDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTITTQGFLD 3265
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3266 YETKQSYHLMVKAFNIPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVV 3325
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y + + F ID SG +
Sbjct: 3326 GEVFASDRDMGTDGEVHYLTFGNSRKKGFQIDEKSGQI 3363
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 36/160 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAGNPESYFNID- 53
Y + EN ++ L+A+DGDL + + + + S+ P F +D
Sbjct: 583 YQVSLAENSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALAVVGPSSVTPRRVFRLDP 642
Query: 54 -----------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+ +DL P V + + +VNDN P+ Y+A
Sbjct: 643 VSGKLSTISQLDREEQAHFSLQVLATDLGSPPLFSITRVNVSLLDVNDNSPVFYPVQYFA 702
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I EN+ + ++A+D DL P+ + Y ISAG+ +
Sbjct: 703 HIQENEPAGTYVTTVSATDPDLGPNGTVKYSISAGDTSRF 742
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 35/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
V+Y + E Q G + ++ A D D P+ I Y +P+ N G
Sbjct: 1112 VFYFE--EEQRGGSSVGKINAVDKDFGPNGEIRYSFEHMHPDFELNTVTGEIRSTHQFDR 1169
Query: 57 ------------DLT------GGP----DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
LT G P DQ + +Y V+++NDN P L +Y A + E
Sbjct: 1170 EALMRQRGAAVFSLTVIATDQGLPKPLRDQATVQIY--VKDINDNAPKFLKDLYQATVSE 1227
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + +++++ASD D + I Y + GN E F ID +G +
Sbjct: 1228 LAANLTQVLRVSASDVDEGINGLIHYSVIKGNEEKRFAIDSSTGQV 1273
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
I+Q+ A D D + +++Y + GN E F + +L
Sbjct: 2285 ILQVVARDDDQGLNSKLTYVLVGGNEEGAFTLSASGELRLVQSLDREMKEQYILLITAAD 2344
Query: 59 TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+G P + + V +VNDNVP +Y A + E+ I+ + +SD D +
Sbjct: 2345 SGSPALTGTGTIAVTVDDVNDNVPTFAFNMYSATVPEDAPTGTDILLVNSSDADASTNAV 2404
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
ISYK++ G +S F I+ +G +
Sbjct: 2405 ISYKLTGG--DSQFTINPSTGQI 2425
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y ++ EN ++Q+ A+DGD + ++ Y I +G+ +
Sbjct: 2146 VVVIVLDINDNNPLFAQKLYKVEVGENTLTGTDLIQVFATDGDEGTNGQVRYAIVSGDAD 2205
Query: 129 SYFNIDIGSG 138
+ F ID +G
Sbjct: 2206 NEFRIDSVTG 2215
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------DLT 59
I E+ S I ++A D D + I Y IS+GN F I+ + +L
Sbjct: 3106 IPESHSVGTVIRTVSAQDRDAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELC 3165
Query: 60 GGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ V Y V + V +VNDN P Y+ ++EN +++L
Sbjct: 3166 QKHELVVTATDGGWVSRTGYCRVTVNVIDVNDNSPAFNPEDYFPNVLENAPSGTTVIRLN 3225
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D P+ I+Y I + + + F ID +G++
Sbjct: 3226 ATDADSGPNAVIAYAIQSSDSD-LFVIDPNTGTI 3258
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 32/117 (27%)
Query: 38 SYKISAGNPESYFNIDI-------GSDL----TGGPDQV--------------------- 65
SY+I AGN E F ++I G+ L GG D+
Sbjct: 131 SYRIVAGNEEGCFRLNITLNPSGEGAFLHLVSRGGLDREATPTYQLLVQVEDKGEPRRRG 190
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
YL V + VQ++NDN P+ +Y A++ E+ ++Q+AA+D D + I Y++
Sbjct: 191 YLQVNVTVQDINDNPPIFSQTLYQARVPEDAPVGASVLQVAAADADEGTNADIRYRL 247
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + + V +VNDN P + A+I+EN S I+ +AA D D + +++Y+
Sbjct: 2656 PFSSYKKLEVMVIDVNDNAPEFEQDPFVAEIMENLSP-RKILTVAAVDRDSGLNGQLNYE 2714
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2715 IIEGNMENSFSINRATGEI 2733
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L +Y A + E + + +++++ASD D + I Y + GN E F ID + L
Sbjct: 1217 LKDLYQATVSELAANLTQVLRVSASDVDEGINGLIHYSVIKGNEEKRFAIDSSTGQVTLV 1276
Query: 60 GGPDQ----VYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D YL+V I V + NDN P ++EN
Sbjct: 1277 GKLDHEATASYLLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKTTLLVDVLENMRV 1336
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1337 GELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1378
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------NIDIG 55
PVY I E+ + + + A+D D + I+Y +S + E F N+
Sbjct: 1850 PVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRA 1909
Query: 56 SD--------LT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D LT GG + VY + ++NDN P+ Y ++EN S I
Sbjct: 1910 LDYEAQQYYILTVRAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSLMENLSPGSAI 1969
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ + +D D + ++S+ I++G+ F ID
Sbjct: 1970 LNFSVTDADDGSNSQLSFSIASGDSGGQFGID 2001
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 23/153 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y I+E++ ++ ASD D + I+Y I GN
Sbjct: 1007 YEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIIEGNTGDAFGIFPDGQLYIKSELDR 1066
Query: 47 ---ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
E Y + + SD P + V + +++VNDN P+ Y E Q G +
Sbjct: 1067 ELQERYILLVVASDRAVEPLNATVNVTVILEDVNDNRPLFNSTNYVFYFEEEQRGGSSVG 1126
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
++ A D D P+ I Y +P+ N G
Sbjct: 1127 KINAVDKDFGPNGEIRYSFEHMHPDFELNTVTG 1159
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 27/149 (18%)
Query: 17 GILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------- 58
G LP ++Q+ A D D + ++SY + GN ++ F + G +L
Sbjct: 616 GALPRTVLQVVARDDDQGLNSKLSYVLVGGNEDNAFTLSAGGELRVTRSLDRETKERFVL 675
Query: 59 ------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+G P V++ V + NDN+P +Y+ + E+ ++ + ASD D
Sbjct: 676 TITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVPEDAPTGTDVLLVNASDAD 735
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ISY+I GN S F I+ +G +
Sbjct: 736 ASTNAVISYRIIGGN--SQFTINPSTGQI 762
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ +I Y+
Sbjct: 993 PFSSYEKLDITVLDVNDNSPVFKEDPFVSEILENLSP-RKILTVSAMDKDSGPNGQIDYE 1051
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E F+I+ +G +
Sbjct: 1052 IVNGNKEHSFSINHATGEI 1070
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y+ + E+ ++ + ASD D + ISY+I GN + N G +T
Sbjct: 711 MYFTAVPEDAPTGTDVLLVNASDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDR 770
Query: 62 --PDQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D L+V + V +VNDN P Y I S +
Sbjct: 771 ETKDNYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSTTSPGSFV 830
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ +D D+ P+ + Y +S N E F+ID G++
Sbjct: 831 FAVTVTDADIGPNSELHYSLSGRNSEK-FHIDPLRGAI 867
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 1544 YLPTVLENAPSGTTVIHLNATDADSGTNAVIAYAVQSSDSD-LFVIDPNTGVITTQGFLD 1602
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + YY +I E +
Sbjct: 1603 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKRYYFEISEAAPRGTLV 1662
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 1663 GEVFASDRDLGADGEVHYLIFGNSRKKGFQINKKTGQI 1700
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 27/157 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
+Y ++ E+ +VQ+ A+D D + ++ Y I GN + F ID + L
Sbjct: 501 LYRVEMSEDTLTGTDVVQVCAADADEGTNGQVRYGIVDGNADQDFRIDSVTGAVTVARPL 560
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
YL+ V I + + ND VP T + Y+ V G LP
Sbjct: 561 DREKTSTYLLTVQAADRGSTPRTDTSTVSIVLLDSNDFVP-TFELSPYSINVPENLGALP 619
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
++Q+ A D D + ++SY + GN ++ F + G
Sbjct: 620 RTVLQVVARDDDQGLNSKLSYVLVGGNEDNAFTLSAG 656
>gi|149065690|gb|EDM15563.1| rCG59452 [Rattus norvegicus]
Length = 3034
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y +I EN ++ + A+DGD + + Y++ G F ID S +
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSGVVRTRAVVD 431
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 432 REEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNT 491
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 492 PVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 531
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 479 YVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 538
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 539 FEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 598
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 599 VLHIQAVDADAGENARLQYRL 619
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 912 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 971
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P+ + V +QV ++NDN P+ + VE S +
Sbjct: 972 DRENVAVYNLWALAVDRGNPNPLSASVEVQVTVLDINDNPPV-FEKDELELFVEENSPVG 1030
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 1031 SVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 1071
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 688 VSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 745
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 746 NRFALSSQSG 755
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 809 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 868
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I Q+ NDN P L Y + E+ ++Q
Sbjct: 869 DQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 928
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 929 VSATDRDSGPNGRLLY 944
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 199 PAMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYL 258
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + + V I +Q+VNDN P+ Y+A +
Sbjct: 259 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 318
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D D + + Y I+ + E F ID +G++
Sbjct: 319 ENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAV 367
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDP--VYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKI 122
+ V++ V + NDN P+ DP Y A+I E I QL A D D + P+ + Y I
Sbjct: 2789 ITVFVSVLDANDNAPI-FDPSAKYEAEISELAPLRYSIAQLVAIDADQENTPNSEVVYDI 2847
Query: 123 SAGNPESYFNIDIGSGSL 140
S+GN E F ID+ SG L
Sbjct: 2848 SSGNDEHMFTIDLVSGVL 2865
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 695 GELDYERRNSYEFPV----------LATD-RGGLSTTAMI-KLQLTDVNDNRPVFYPREY 742
Query: 89 YAQIVEN---QSG--ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+G +PIV + A+D D ++SY+I AGN F ID SG +
Sbjct: 743 NVSLRESGPAQAGGTPMPIVAVVATDPDAGSFGQVSYRIVAGNEAGIFRIDRASGEI 799
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------------------- 53
+ + A D D + RISY I +GN E F I
Sbjct: 1670 VTHIVAVDSDAGENGRISYDIVSGNGEGRFRIKPQSGIIELAKTLPPASEQLDKTGRFML 1729
Query: 54 -IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
I + G P Q L + + VQ + N P L VY A I+EN ++Q+AA
Sbjct: 1730 TIRASDHGAPTAQQTTLSLQLLVQGSHSNPPRFLQAVYQATILENVPSGSFVLQVAAKAF 1789
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I G +F++D G
Sbjct: 1790 HGADNANLSYEIPTGVAADHFHVDWQRG 1817
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 16 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQN 75
+G P+ + A G L + + Y+ + + + I +D P L + + VQ+
Sbjct: 1006 AGSAPLFAIDARSGHLVLSRHLDYETA----QRHSLIVTATDAGLPPLSADLSILVDVQD 1061
Query: 76 VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VNDN P+ Y + E+++ I+Q+ ASD D + RI+Y+I
Sbjct: 1062 VNDNPPVFERDEYAVNVSESRAINAQIIQVNASDLDTGNNARITYRI 1108
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +D P ++++V +VNDN P VY+A ++E ++Q+ A D D
Sbjct: 497 VATDKGTPPLHASKSIFLRVTDVNDNAPEFEQDVYHANVMEVADPGTSVLQVLARDRDEG 556
Query: 114 PDQRISYKISAGNPES---YFNIDIGSG 138
+ +SY + A P++ +F ID +G
Sbjct: 557 TNAALSYAL-ADTPDTHAQWFQIDAQTG 583
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLT--- 59
VY+A ++E ++Q+ A D D + +SY + A P++ +F ID + L
Sbjct: 530 VYHANVMEVADPGTSVLQVLARDRDEGTNAALSYAL-ADTPDTHAQWFQIDAQTGLITTR 588
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P V + + +VNDN P+ Y + EN+
Sbjct: 589 SHIDCETEPVPQLTIIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPV 648
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
I++++ASD D + ++Y + G + F + SG +
Sbjct: 649 GRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEI 691
>gi|47207212|emb|CAF91491.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ES +NI + G P + + +Q+ +VNDN P+ Y A IVEN S L I +
Sbjct: 387 ESEYNITVSCSDEGAPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIVENNSPGLSIFTV 446
Query: 106 AASDGDLDPDQRISY 120
A D D + + R+SY
Sbjct: 447 RARDADWNQNARVSY 461
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG- 125
+++ I V + NDN P+ Y + +VEN + + + ASD D + +I+Y I+
Sbjct: 198 MLILITVLDANDNAPVFTQSTYKSTVVENSAKGTVVATVTASDADDGANSKITYSITNTL 257
Query: 126 -NPESYFNIDIGSGSL 140
+ + F I++ +G +
Sbjct: 258 DDVRNLFKINMENGEV 273
>gi|410948515|ref|XP_004001536.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Felis
catus]
Length = 840
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + +VNDN P+
Sbjct: 406 TDGPLDREQTPEYNVTI----------TATDRGIPPLSSSTTITLHITDVNDNTPIFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|47207229|emb|CAF92014.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1045
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ES +NI + G P + + +Q+ +VNDN P+ Y A IVEN S L I +
Sbjct: 193 ESEYNITVSCSDEGAPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIVENNSPGLSIFTV 252
Query: 106 AASDGDLDPDQRISY 120
A D D + + R+SY
Sbjct: 253 RARDADWNQNARVSY 267
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGI-------------------LPIVQLAAS 108
+++ V +VNDN P+ + PVY A I EN Q G L I + A
Sbjct: 691 IFVTVLDVNDNAPVFVQPVYKAAIAENSQKGTTLTRRSSYQAYIVENNTPGLSIFTVRAR 750
Query: 109 DGDLDPDQRISY 120
D D + + R+SY
Sbjct: 751 DADWNQNARVSY 762
>gi|391336953|ref|XP_003742839.1| PREDICTED: protocadherin Fat 4-like [Metaseiulus occidentalis]
Length = 2971
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 54 IGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
I SD P + +V+I V +VN+NVP +D Y A + E+ + Q+ A
Sbjct: 216 IASDSVKNPHERRTAVAVVHIDVTDVNNNVPEFVDAPYEAHVGESLPAGALVTQVKAK-- 273
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
DLD + + Y AGN + F ID SG++
Sbjct: 274 DLDANSLLQYSFIAGNDDELFRIDTHSGTI 303
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQ---SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
Y+A I EN S +LP V A D + +++ISY+I+ N + F +D ++
Sbjct: 1500 YFASIQENSPPDSIVLPNVH--AEDAE-KFEKQISYQITEDNSQDNFFLDTSQNVVALKV 1556
Query: 64 Q--------------VYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ V+ + V I +++VNDN P+ Y ++ EN
Sbjct: 1557 KKPVDRDAMPAFLQGVFTLTVAASNSKCAGNTRVRIHIEDVNDNSPVFDKSEYNVELEEN 1616
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D ++ Y I G+ E F +D SG L
Sbjct: 1617 TPPGHVVVHVSATDRDGLDSNKLRYYIMEGDSEEEFTLDESSGIL 1661
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
Y Q+ EN + + + A+D D D +I+Y ++ G+ +
Sbjct: 776 YNFQVAENAAQGTSVGNIQATDRDGD---KITYTLAEGDTDFFGIERDHGRVFVKKNLES 832
Query: 48 -SYFNIDIGSDLTGGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++F+ + G P L V I V+ VN++ P+ Y ++E + +++
Sbjct: 833 RTHFHFVAVATDDGAPSNRSLGVKVTIYVREVNNHPPVFSHQSYEGSVLEKFATDRVVIR 892
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D DL + I+Y I++GN + F ID +G +
Sbjct: 893 LHATDLDLQ-NNTITYDITSGNEDQVFMIDPVTGEI 927
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y ++ EN +V ++A+D D ++ Y I G+ E F +D S D
Sbjct: 1609 YNVELEENTPPGHVVVHVSATDRDGLDSNKLRYYIMEGDSEEEFTLDESSGILSVKTIPD 1668
Query: 58 LTGGPDQVYLIVYI-------------QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
P IV I ++ ++ND P L+ ++ + E + + VQ
Sbjct: 1669 REKTPSYSLKIVAIDSANNTGRATINVKILDMNDWTPTFLNDTFFLNVTEGRPSLNKFVQ 1728
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDI 135
L +D D ++++ I GN E+ F + +
Sbjct: 1729 LPVADYDDGINRQVELYIVDGNNENQFRLGV 1759
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+++++V N ++ P+ + Y+ V+ + +P+VQ+ ASD D ++ Y+I +
Sbjct: 1168 MLFVRVSNTLNHPPV-FERFAYSVFVDENAANVPLVQVHASDQDEGRSGKVFYRIVRSSM 1226
Query: 128 ESYFNIDIGSGSL 140
+ F ID SG +
Sbjct: 1227 KGAFKIDETSGKI 1239
>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
Length = 3180
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y + EN+ PI+ L A D D P+ + Y I++GN E F +D
Sbjct: 1295 YQVIVPENEPIGSPILSLDAKDEDEGPNGIVRYTITSGNEEKEFKVDPVTGTISILRSLD 1354
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DL P + V I + ++NDN P Y A + EN I
Sbjct: 1355 YDEIQEYRLNITAKDLGFKPKETTATVTIILTDINDNAPQFNQSQYVAYLTENSPAKSFI 1414
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A+D D + I Y I + F+ID SG +
Sbjct: 1415 FKVKATDIDSPKNAIIKYYIK-NEMSALFSIDENSGDI 1451
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDG-DLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQNV 76
I+QL A D D + I Y I GN +YF+ID + Q Y +I+V+ +
Sbjct: 1204 IIQLQAEDNLDFGINAEIEYNIFGGNGTTYFSIDKLNGWIIIGKQFYYTGQYYHIKVKAI 1263
Query: 77 NDNVPMTLD---------------PVYYA---QIV--ENQSGILPIVQLAASDGDLDPDQ 116
+ VP D P + A Q++ EN+ PI+ L A D D P+
Sbjct: 1264 DRGVPPQWDETTVTFVVTGENIYSPRFTALSYQVIVPENEPIGSPILSLDAKDEDEGPNG 1323
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
+ Y I++GN E F +D +G++
Sbjct: 1324 IVRYTITSGNEEKEFKVDPVTGTI 1347
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + ++ + I+V + NDN P+ + +Y A I E +S ++++ A D D + + RISY+
Sbjct: 849 PLKSFIEIEIKVTDANDNAPILENLLYNASIPEEESPPQTVIKIEAHDDDSNENGRISYR 908
Query: 122 ISAGNPESYFNIDIGSGSL 140
+ + E F ID SG +
Sbjct: 909 L-VNDYEETFAIDSDSGEI 926
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 36/170 (21%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------I 54
DP Y A + EN S ++Q++A+D D + R+ Y I++G+ F+I +
Sbjct: 339 FDPKQYSASVPENASIGASVLQVSATDVDEGINGRVRYSIASGDENRDFSISEDTGIVRV 398
Query: 55 GSDLTGGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+L Y++ + I +Q++NDN P LD Y A ++EN
Sbjct: 399 AKNLNFERKSRYILSIKAEDCGKDDIRFDTAELSISIQDINDNPPTFLDTPYLAYVMEN- 457
Query: 97 SGILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P I+ + A D D P + ++ Y I G+ + F I+ SG +
Sbjct: 458 --VIPPYGGYILTVQAYDADSPPFNNQVRYFIKEGDSD-LFKINASSGQI 504
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQ 104
+S F I + + G P V ++I++ + NDN P+ DP Y A + EN S ++Q
Sbjct: 302 KSNFTILLTAKDRGDPPNVTKGKIFIKILDENDNSPV-FDPKQYSASVPENASIGASVLQ 360
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++A+D D + R+ Y I++G+ F+I +G
Sbjct: 361 VSATDVDEGINGRVRYSIASGDENRDFSISEDTG 394
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID------------ 53
Y A I E ++Q+ A D D+ + + S+ I GN F ID
Sbjct: 1609 YEATISEGAQVGEEVIQVKAVDKDVRSQNNQFSFSIIDGNLNQDFKIDPQGGSIEVARNL 1668
Query: 54 -----------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
IG+ TG P + V I + ++NDN P+ + + EN+
Sbjct: 1669 DREKVSTYSLIIGAIDTGVPPETGTATVKITLTDINDNGPVIDTASFNGAVYENEPPNTS 1728
Query: 102 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
I L+A+D DL P+ +Y I G E+Y + +G L
Sbjct: 1729 ITTLSANDPDLPPNGAPFTYAIIGGRHENYVKVQKHTGVL 1768
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V + NDN P +D ++E + +++ A+D DL + +++ ISAGN
Sbjct: 1274 VHIEVLDENDNTPRFVDNKPRISVLETAPVNVELLRFRATDSDLGANSELTFAISAGNRR 1333
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1334 DAFHVDPATGAL 1345
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+AG+ F I
Sbjct: 2158 YSASVAENASIGASVLQVSALDRDEGANGRVRYSIAAGDDNRDFTISEDAGVIRVAKNLN 2217
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D +L G V I + ++NDN P+ LD Y A ++EN
Sbjct: 2218 FERKARYRLQVQAEDCAPELGGEALVDAAEVVINLLDINDNAPVFLDSPYLAHVMEN--- 2274
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
+LP ++Q+ A D D P + ++ Y + G+ + F I+ +G +
Sbjct: 2275 MLPPGGGFVMQVKAYDADTPPYNDQVRYFLKEGDTD-LFRINASTGDI 2321
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
++ + EN ++++ +SD D+ + +SY + GNP + F ID + L
Sbjct: 2790 LFSVNVTENSEIGAFVIRITSSDQDIGANANVSYSFT-GNPSNKFAIDPLSGNVTVAGHL 2848
Query: 59 TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
YL+ + I +Q+ NDN P + Y+ E Q + + Q
Sbjct: 2849 DREVQDEYLLKVTVGDGAWGAETPLTITIQDQNDNPPEFEEETYHFHFPELQGRMAHVGQ 2908
Query: 105 LAASDGDLD-PDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D P+ ISY + P F +D SG +
Sbjct: 2909 VVATDRDKQGPNSVISYSLL--QPSDLFTVDPASGDI 2943
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L +Y A + E +S IV + A D D+ P + + SY I GN F +D
Sbjct: 3389 LQTLYEASVSEGESVGSRIVTVRAIDKDVRPQNNQFSYSIIGGNVGQAFKVDPQSGDIET 3448
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQ 96
IG+ TG P Q V I++ +VNDN P+ DP + EN+
Sbjct: 3449 AKFLDRESVPSYELIIGAIDTGSPPQTGSATVKIELLDVNDNGPV-FDPTDVIGYVSENE 3507
Query: 97 SGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
I+ L+A+D DL P+ Y++ G +++ SG L
Sbjct: 3508 PAGTSIMTLSATDPDLPPNGAPFFYRLIGGKQMDLVSLEKHSGIL 3552
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+++ A+D DL + +++ ISAGN F++D +
Sbjct: 1307 LLRFRATDSDLGANSELTFAISAGNRRDAFHVDPATGALYLRKPLDYEDIEVYHLNVTCS 1366
Query: 58 LTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P +I + + V + NDN P+ + QIVE P+V + A D D +
Sbjct: 1367 DAGHPRLSSVITLRVDVIDTNDNPPVFPNTAIVRQIVEGIPVHRPVVTVTAVDPDSGDNG 1426
Query: 117 RISYKISAGNPE 128
+SY I++ +PE
Sbjct: 1427 VLSYSIASQDPE 1438
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 21 IVQLAASD-GDLDPDQRISYKISAGNPESYFNID----------------IGSDLT---- 59
I Q+ ASD D + I Y ++AGN YF ++ IGS +
Sbjct: 3017 IAQVHASDDEDFGVNAEIEYTVAAGNGSEYFFVEPESGWLYVNKSLVEFRIGSAFSLKIR 3076
Query: 60 ----GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
G P D+V+ + + +N + P + Y ++ EN+ I+ + A D D
Sbjct: 3077 ATDKGVPPQSDEVWATLVVTGEN--RHAPTFVAVSYQVRVPENEPVNTTILTVNAVDSDD 3134
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ + Y+ISAGN F+I +G++
Sbjct: 3135 GPNGMVRYEISAGNERHEFSIHPITGAV 3162
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPV 87
G LD +QR +Y + I D G P + L V + V + NDN P+ DP
Sbjct: 2109 GPLDREQRANYTLRL----------IAKD-RGEPARSTLQTVQLLVLDENDNSPI-FDPR 2156
Query: 88 YY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y A + EN S ++Q++A D D + R+ Y I+AG+ F I +G
Sbjct: 2157 QYSASVAENASIGASVLQVSALDRDEGANGRVRYSIAAGDDNRDFTISEDAG 2208
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 27 SDGDLDPDQRISYKISA--GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMT 83
+ GD+ + + YK + +PE+ +++ + + G P +VY+ + + N++ P
Sbjct: 2939 ASGDIFSKRTLRYKHTKRPTSPENVYSLYVVATDNGRPPLSSKTLVYVSIVDSNNHAPRF 2998
Query: 84 LDPVYYAQIVENQSGILPIVQLAAS-DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Y + E I Q+ AS D D + I Y ++AGN YF ++ SG L
Sbjct: 2999 EQRAYLYPVPEGYPTNKKIAQVHASDDEDFGVNAEIEYTVAAGNGSEYFFVEPESGWL 3056
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 50 FNIDIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+N+ I + G P + YL+ I V +VND+ P+ Y A + E + ++
Sbjct: 406 YNLTIVATDKGSPPRSATAYLV--IHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASIS 463
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D + RI Y +GN +++F ID +G
Sbjct: 464 ATDADSGLNARIYYDFESGNEQNWFAIDQDTG 495
>gi|195017700|ref|XP_001984647.1| GH14914 [Drosophila grimshawi]
gi|193898129|gb|EDV96995.1| GH14914 [Drosophila grimshawi]
Length = 1664
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78
L Q++ G++ +R+ Y+ A + F + + ++ + I V+NVND
Sbjct: 990 LEYFQISERTGEIILKKRLDYEALAEIGSTQFELQVRANSADRQRSTISRLNITVENVND 1049
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISY 120
N P+ Y+A I+EN+ P++Q+ A D D + D+R+ Y
Sbjct: 1050 NSPIFEQSSYHATIIENKGYPEPVIQVKAQDKDAALNERDERLGY 1094
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL---DPDQRISY-KI---SAGNPESYFNID------ 53
Y+A I+EN+ P++Q+ A D D + D+R+ Y KI G F I+
Sbjct: 1059 YHATIIENKGYPEPVIQVKAQDKDAALNERDERLGYHKIIYSLQGEYAMLFEINNLTGQI 1118
Query: 54 --------------------IGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
D G P Q + + I V +VNDN P +Y
Sbjct: 1119 VVARNQTIDRERTPTIRLQVKAEDSPGKPTDAKQSVVELLIDVLDVNDNAPEFSKKLYST 1178
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
I EN + ++Q+ ASD D P + Y+ ++ G+ F+I+ +G L
Sbjct: 1179 VIPENALKMENVLQIEASDADEGPGGEVRYELVNEGDANGLFSINAQNGLL 1229
>gi|348552360|ref|XP_003461996.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Cavia
porcellus]
Length = 3172
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y ++ EN ++ + A+DGD + + Y++ G+ F ID S +
Sbjct: 522 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGS-GGVFEIDARSGVVRTRAVVD 580
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 581 REEQAEYQLLVEANDQGRNPGPLSATATVHILVEDENDNYPQFSEKRYVVQVPEDLAVNT 640
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 641 PVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 680
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 35/160 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 628 YVVQVPEDLAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 687
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 688 FEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHS 747
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ + A D D + R+SY++ +D GS ++G
Sbjct: 748 VLHIQAVDADSGENARLSYRL----------VDTGSAAVG 777
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ PI ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 958 YTVSVSEDRPVGTPIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 1017
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I ++ NDN P L Y + E+ ++Q
Sbjct: 1018 DQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 1077
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 1078 VSATDRDSGPNGRLLY 1093
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 34/166 (20%)
Query: 4 DPVYYAQIVE---NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
DPV+ + E N+ + L D D + I+Y+++ GN + F + S +G
Sbjct: 848 DPVFTQPLYELRLNEDAAVGSSVLTLRARDRDANSVITYQLTGGNTRNRFAL---SSQSG 904
Query: 61 G------------PDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVE 94
G ++ Y++ V+I V + N + P+ Y + E
Sbjct: 905 GGLITLALPLDYKQERQYVLAVTASDGTRSHTVQVFINVTDANTHRPVFQSSHYTVSVSE 964
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ PI ++A+D D + RI+Y + +P F ID +G++
Sbjct: 965 DRPVGTPIATISATDEDTGENARITYVLE--DPVPQFRIDPDTGTI 1008
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 1061 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 1120
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P + V IQV ++NDN P+ + VE S +
Sbjct: 1121 DRENVAVYNLRALAVDRGIPAALSASVDIQVTVLDINDNPPV-FERDELELFVEENSPVG 1179
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 1180 SVVAKIHANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 1220
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ P+Y ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 837 VSITVLDVNDNDPVFTQPLYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 894
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 895 NRFALSSQSG 904
>gi|345308451|ref|XP_003428695.1| PREDICTED: protocadherin Fat 4-like, partial [Ornithorhynchus
anatinus]
Length = 563
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 33/168 (19%)
Query: 4 DPVYY--AQIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---- 54
DPV+ A VE + G L +++++ASD D P+ + Y + AG + F +D
Sbjct: 177 DPVFSRGAYEVEVEEGALAGTDLLRVSASDADEGPNGEVRYALVAGAADREFRLDSVTGV 236
Query: 55 --------------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
SD G P +V + + +VND P+ DP Y+ V
Sbjct: 237 LSVGGPLDREEKAEYRLTVQASDRGGSPRTATALVAVLLGDVNDFAPV-FDPSPYSLDVP 295
Query: 95 NQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P ++Q+ A D D + +++Y ++ GN ++ F + SG L
Sbjct: 296 ENGRDSPRTVLQVVARDDDQGVNSQLTYSLAGGNEDTAFTLS-SSGEL 342
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P+ Y ++ E +++++ASD D P+ + Y + AG +
Sbjct: 166 VRVVVLDVNDNDPVFSRGAYEVEVEEGALAGTDLLRVSASDADEGPNGEVRYALVAGAAD 225
Query: 129 SYFNIDIGSGSL 140
F +D +G L
Sbjct: 226 REFRLDSVTGVL 237
>gi|335283644|ref|XP_003124076.2| PREDICTED: protocadherin gamma-B4 [Sus scrofa]
Length = 803
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P + + + +VNDN P+
Sbjct: 404 TDGALDREQTPEYNITI----------TATDKGQPPLSSSSSITLHIGDVNDNAPVFQQA 453
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++A D DL P+ +SY + AG+ E SY ++ SG
Sbjct: 454 SYEVHVAENNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALASYVSVSAQSG 510
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------DLTG---- 60
+ + A D D + RISY I GN E F I S D TG
Sbjct: 1633 VTHILAVDRDAGENGRISYDIVNGNGEGRFRIKPQSGIIELAKTLPPAFEQLDKTGRFTL 1692
Query: 61 ----------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P Q L + + VQ + N P L VY+A I+EN ++Q+AA
Sbjct: 1693 TIRASDHGVPNPKQTTLSLQLMVQGSHSNPPRFLQAVYHATILENVPSGSFVLQVAAKAF 1752
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I G + +F++D G
Sbjct: 1753 HGADNANLSYEIPTGVADDHFHVDWQRG 1780
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 165 PAMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYL 224
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + + V I +Q+VNDN P+ Y+A +
Sbjct: 225 DLQISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 284
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D D + + Y I+ + E F ID +G++
Sbjct: 285 ENATVGSSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAV 333
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 67 LIVYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKIS 123
+ V++ V + NDN P+ + Y A+I E I QL A D D + P+ + Y IS
Sbjct: 2755 ITVFVSVLDANDNAPVFDANAKYEAEISELAPLRYSIAQLIAVDADQENTPNSEVVYDIS 2814
Query: 124 AGNPESYFNIDIGSGSL 140
+GN E F ID+ SG L
Sbjct: 2815 SGNDEHMFTIDLVSGVL 2831
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 661 GELDYERRNSYEFPV----------LATD-RGGLSTTAMI-KLQLTDVNDNRPVFYPREY 708
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S +PIV + A+D D ++SY+I AGN F ID SG +
Sbjct: 709 NVSLRESGPAQASSTPMPIVAVVATDPDAGSFGQVSYRIVAGNEGGIFRIDRASGEI 765
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------------IGSDL 58
I + ASD D P+ I Y I GN + F+ID + +
Sbjct: 1872 IHTVVASDLDEGPNAEIVYSIIGGNLGNKFSIDARTGELSARSLDREQHSRYTLQLQASD 1931
Query: 59 TGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P Q + + + V++ NDN P Y A + EN + ++++ ASD DL +
Sbjct: 1932 RGQPITHQGHCNISVFVEDQNDNEPRFELAKYMASVAENAAIGSSVLRIKASDADLGVNS 1991
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1992 RLVYSL-ANETQWQFAIDSKSG 2012
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1019 LTILVDVQDVNDNPPVFERDEYAVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1074
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 36/145 (24%)
Query: 32 DPDQR--ISYKISAGNPESYFNIDIGS---------------------DLTGGPDQVY-- 66
D QR + Y I +G+P+ YF+I+ S T G VY
Sbjct: 843 DTAQRSPVRYSIYSGDPDGYFSIEPASGNIRIAHPLDHEAKAQVLLNIQATSGEPPVYGH 902
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
V I+V++VNDN P + + EN P+ A D D +++Y ++ GN
Sbjct: 903 TQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHAHDKDSGSSGQVTYSLANGN 962
Query: 127 -----------PESYFNIDIGSGSL 140
S F ID SG L
Sbjct: 963 ATKSGKQKAAQASSLFAIDARSGHL 987
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I +D P ++++V +VNDN P VY+A ++E ++Q+ A D D
Sbjct: 463 IATDKGTPPLHASKSIFLRVTDVNDNAPEFELDVYHANVMEVADPGTSVLQVQARDRDEG 522
Query: 114 PDQRISYKISAGNPES---YFNIDIGSG 138
+ +SY + A P++ +F ID +G
Sbjct: 523 NNAALSYAL-ADTPDTHAQWFQIDTQTG 549
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLT--- 59
VY+A ++E ++Q+ A D D + +SY + A P++ +F ID + L
Sbjct: 496 VYHANVMEVADPGTSVLQVQARDRDEGNNAALSYAL-ADTPDTHAQWFQIDTQTGLITTR 554
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P V + + +VNDN P+ Y + EN+
Sbjct: 555 SHIDCETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPV 614
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
I++++ASD D + ++Y + G + F + SG +
Sbjct: 615 GRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEI 657
>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
Length = 4349
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELRYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
>gi|431892546|gb|ELK02979.1| Protocadherin gamma-B5 [Pteropus alecto]
Length = 670
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + + +VNDN P+
Sbjct: 403 TDGPLDREQ---------TPE--YNVTITATDKGKPPLSSSITITLHITDVNDNAPVFQQ 451
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY ++ SG
Sbjct: 452 SAYLVHVPENNPPGASIAQVSASDSDLGPNGHVSYSIVASDLEPRALSSYVSVSAQSG 509
>gi|307200809|gb|EFN80862.1| Neural-cadherin [Harpegnathos saltator]
Length = 1625
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY--- 120
Y V I V++VNDN P+ P Y QI E LP ++ + A+DGD D Q I Y
Sbjct: 33 YTTVVIHVKDVNDNPPVFERPNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLT 92
Query: 121 --KISAGNP-ESYFNIDIGSGSL 140
I A NP S F+I+ +G +
Sbjct: 93 GQGIDADNPTNSKFDINRTTGEI 115
>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
Length = 4369
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 24/152 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVMVVAAHDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSRAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++QL ASD D ++++ I++GN +F I
Sbjct: 1156 VLQLDASDPDSSSKGKLTFNITSGNHMGFFII 1187
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2762 LDPDTGVIKVRKTMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVIDVNDNRPVFEADP 2821
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2822 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNIHELFAIDSESG 2875
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2296 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2355
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2356 ELDYEAQQRFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2415
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2416 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2447
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2194 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2250
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2251 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2310
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2311 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2351
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V+N N + P Y A I + + ++Q+ A D D + + Y + G
Sbjct: 1558 FVWVTIHVENGNLHPPRFTQLRYEASIPDTTAPGTELLQVRAMDADRGANAEVRYSLLKG 1617
Query: 126 NPESYFNID 134
N E +FNI+
Sbjct: 1618 NGEGFFNIN 1626
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
++EN + +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 724 VLENAPVNTSLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTIAAPLDYETT 783
Query: 59 -----------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P + + ++ + V++ ND+ P Y I E+ + +L
Sbjct: 784 NFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDHAPRFPPGGYQLTISEDTEVGTTVAELT 843
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + + R+ Y + + P F++ +G L
Sbjct: 844 TKDADSEDNGRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + + + I+ ++A D +D Q + Y+I AGN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSVRRDWPVGKSIMTMSAID--VDELQNLKYEIVAGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|390460431|ref|XP_002745424.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Callithrix
jacchus]
Length = 2880
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+VNDN P +Y A + E Q I+Q+ A+D D + I Y I
Sbjct: 1732 RAYSKVAVLIQDVNDNSPCFEQSIYQASVSEGQFYNASIIQVFATDLDSGLNGLIEYSIL 1791
Query: 124 AGNPESYFNIDIGSG 138
+GN E+ F ID SG
Sbjct: 1792 SGNQEAAFRIDALSG 1806
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E Q I+Q+ A+D D + I Y I +GN E+ F ID S
Sbjct: 1755 IYQASVSEGQFYNASIIQVFATDLDSGLNGLIEYSILSGNQEAAFRIDALSGVITTNAIL 1814
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ IQV ++NDN P L +++ VE LP
Sbjct: 1815 DYELTSSYSLIVQATDKGMPRLSNTTVIKIQVTDINDNAPAFL----HSEAVEIAEDSLP 1870
Query: 102 ---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1871 GVIVTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1909
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
+Y A + ENQ+ +V++ A D D + ++ ++I G F I D G +T
Sbjct: 1237 LYEASVKENQNPGEFVVRVEALDRDSGVNSKLQFEIMPGASFELFQINSDTGEVVTTTML 1296
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+V+ + + V++ ND+ P + Y +++ENQ +
Sbjct: 1297 DREIQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEFIVFSYDIEVLENQEPEV- 1355
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + ASD D ++ + Y I GN + YF I+ SG L
Sbjct: 1356 VYTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELS 1395
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2145 LASDSGCPPLSATAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2204
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2205 SHAEIIYHIISGNEKGHFYLEENTGVL 2231
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P+ + + +++E Q + + + A D D
Sbjct: 776 TDRGSPPRNATIAVYVSVTDINDNKPLFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 835
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + Y +S+ + +F ID SG +
Sbjct: 836 EGNNAEVVYSVSSEDSSDHFKIDANSGEI 864
>gi|148664773|gb|EDK97189.1| mCG140840 [Mus musculus]
Length = 794
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 37/150 (24%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------------GPDQVYLI 68
ASD D+ + ++YK+S P YF +D+ S+ G P+ L+
Sbjct: 156 GASDADVGLNSMLTYKLS---PSEYFGLDVKSNSDGNKQIRLLLKKSLDREDAPEHKLLL 212
Query: 69 ---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ + V +VNDN P P Y +I+EN +++L ASD D
Sbjct: 213 TATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDKDEG 272
Query: 114 PDQRISYKISAGNPE---SYFNIDIGSGSL 140
+ ISY + P F+ID +G +
Sbjct: 273 TNSAISYSFNRLVPPKTLEQFSIDADTGEI 302
>gi|47227102|emb|CAG00464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2970
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT-------------- 59
++++ A+ D+ + ISY+I +GN FNID + DL
Sbjct: 2004 VLRVLATSVDIGLNAEISYRIRSGNELGKFNIDTNLGSIFVADDLDFEVCKDYYLTIEAW 2063
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P +V I + +VNDN P +Y + E+ S + +++A D D +
Sbjct: 2064 DGGNPPLSSATVVTIDLMDVNDNAPTFSQDIYNVLVSEDASVGQMVTRVSAEDLDSQGNG 2123
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
RI+Y I G+ ++F ID +G L
Sbjct: 2124 RITYSILKGDRNNHFWIDPVTGIL 2147
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VNDN P+ Y + E+ + ++++ A+ D+ + ISY+I +GN
Sbjct: 1973 ILVLDVNDNAPVFQRRDYGVTVPEDVAVGTEVLRVLATSVDIGLNAEISYRIRSGNELGK 2032
Query: 131 FNIDIGSGSL 140
FNID GS+
Sbjct: 2033 FNIDTNLGSI 2042
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S +N+ + +T G + V+I+VQ+ NDN P+ P Y + E+ + +V++
Sbjct: 139 QSVYNMTV--QVTDGTNFATAQVFIRVQDGNDNPPVFSQPAYDVSVSEDIPVDMELVRVR 196
Query: 107 ASDGDLDPDQRISYKISAG-NPESY--FNIDIGSG 138
AS D+D R+SY I +P S F ++ G+G
Sbjct: 197 AS--DMDERARLSYSIYGSVDPASMRLFRVNPGTG 229
>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
Length = 4349
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+Y I E+ ++QL A D D ++++ I++GN +F I + L Q+
Sbjct: 1141 VFYPSIQEDAPVGTSVLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLLSTAQQL 1200
Query: 66 -------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ V + + +VNDN P+ ++ ++ E S + P
Sbjct: 1201 DRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSP 1260
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +L ASD D + R++Y I + E+ F+ID+ +G
Sbjct: 1261 GPVYRLVASDLDEGLNGRVTYSIEDSDEEA-FSIDLVTG 1298
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
>gi|410948495|ref|XP_003980974.1| PREDICTED: protocadherin gamma-B1 [Felis catus]
Length = 763
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P+ Y +++EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 436 VTLHISDVNDNAPVFHQASYVVRVMENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLE 495
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 496 PRALASYVSVSAQSG 510
>gi|301753509|ref|XP_002912641.1| PREDICTED: protocadherin gamma-B2-like [Ailuropoda melanoleuca]
Length = 844
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y I+ + +D P + + + +VNDN P+
Sbjct: 406 TDGPLDREEIPEYNITV----------LATDRGKPPLSSSTSITLHIADVNDNAPVFGQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 FYLVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1122
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------ESY------ 49
L +Y ++E+ ++Q++ASD D + R+SY G+ E+Y
Sbjct: 816 LRDMYQGTVLEDAPVFTSVLQISASDRDSSTNGRVSYTFQGGDDGEGDFIIETYSGIIRI 875
Query: 50 -----------FNID-IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+N+ D P + + +++ VQ++NDN P+ V + + EN
Sbjct: 876 ARKLDRENVPVYNLKAFAVDRGVPPLKAAVPIHVVVQDINDNAPVFEKDVLFIDVEENSP 935
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D + +I Y+I GN F +DI +G L
Sbjct: 936 VGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDL 978
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG----- 60
Y I EN ++ + A+DGD + + YKI + S F ID + L
Sbjct: 338 YRVSIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNDDGVNSVFEIDSRNGLVRIRERP 397
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V I V++ NDN P Y Q+ EN +
Sbjct: 398 DRETKDRYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSKKRYVVQVPENVAVN 457
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+Q+ A+D D + ++ Y I +GN F I +G
Sbjct: 458 TKIIQVEATDQDEGNNAKVHYSIISGNIRGQFYIHSPTG 496
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y + E++ ++ ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YQVTLSEDRPVGTTVMAISATDEDTGENARITYVMEDNVPQFKIDPDTGTITTQMEIDYE 776
Query: 60 --------------GGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P D Y V I + + NDN P L +Y ++E+ +
Sbjct: 777 DQASFTLAIIAKDNGIPQKSDTAY--VEIIILDANDNAPQFLRDMYQGTVLEDAPVFTSV 834
Query: 103 VQLAASDGDLDPDQRISYKISAGNP-ESYFNIDIGSG 138
+Q++ASD D + R+SY G+ E F I+ SG
Sbjct: 835 LQISASDRDSSTNGRVSYTFQGGDDGEGDFIIETYSG 871
>gi|268570819|ref|XP_002640845.1| C. briggsae CBR-CDH-1 protein [Caenorhabditis briggsae]
Length = 2129
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
+P+ + E+ P + ASD D + + Y I + +P S ID
Sbjct: 248 NPLVEITVREDHRVEEPFYVVLASDKDRKKNGELKYSIISSHPGSSIEIDPVSGQLWSRK 307
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+DL P + ++I + +VNDN P Y+ +++EN
Sbjct: 308 AFDYEAIRNFKLRIKATDLGIPPRSSNMTLFIHLLDVNDNSPKFEKSSYFLEVLENSPPK 367
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ ASD D + ISY+I+ G+ YF ID G++
Sbjct: 368 TILGKILASDADSGDNGMISYRITNGS--EYFGIDSKLGTI 406
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 24/128 (18%)
Query: 36 RISYKISAGNPESYFNID-----------------------IGSDLTGGPDQVYLIVYIQ 72
++ Y I +G+PE+ F+ID I + + G + V IQ
Sbjct: 177 KLKYSIYSGDPENQFSIDENSGKIYVTRYLDADVHDTVLLNIQAKMENG-ESNQTQVLIQ 235
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
+++ NDN P+ +P+ + E+ P + ASD D + + Y I + +P S
Sbjct: 236 IEDHNDNSPIFPNPLVEITVREDHRVEEPFYVVLASDKDRKKNGELKYSIISSHPGSSIE 295
Query: 133 IDIGSGSL 140
ID SG L
Sbjct: 296 IDPVSGQL 303
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 32/148 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKI-----SAGNPESY-----------FNID----------- 53
++++ A D D P+ +I Y I S G+ E++ F +
Sbjct: 616 VLKVQAYDADEGPNAQIKYSIGSRDLSGGSTENFPVAVNCETGWIFTVKQLDREQCSKYQ 675
Query: 54 ---IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
+ SD P V + V +VNDN P Y A I E+ P+ + A+D
Sbjct: 676 FVVVASDSGEPPKSASATVILTVTDVNDNDPYFEPKSYEAVIAEDDPPGTPVTTVTATDP 735
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
D D RI Y+IS+GN F+I +G
Sbjct: 736 --DEDARIHYEISSGNTRGRFSITSQNG 761
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 30/144 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A I E+ P+ + A+D D D RI Y+IS+GN F+I
Sbjct: 713 YEAVIAEDDPPGTPVTTVTATDPD--EDARIHYEISSGNTRGRFSITSQNGRGLITVAQP 770
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
SD G D +VY+ V + N+ P+ + Y + E+
Sbjct: 771 LDYKQEKRFVLTVTASDSGGRSDTA--LVYVNVSDANNYAPVFENAPYSISVFEDAPVGT 828
Query: 101 PIVQLAASDGDLDPDQRISYKISA 124
++ ++A+D D+ + +I+Y +S+
Sbjct: 829 TVLVVSATDSDVGQNAQITYSLSS 852
>gi|345487394|ref|XP_003425687.1| PREDICTED: hypothetical protein LOC100114931 [Nasonia vitripennis]
Length = 4820
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 6 VYYAQIVENQSGILPIVQLAASD-----GDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
VYY Q E ++ + I + G LD +++ Y++ + N + + T
Sbjct: 191 VYYLQETEGENDVFSITTVNGKGVIRLAGQLDYERKYLYQLRILAVDRAINEKVNTGSTA 250
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
+ ++VQ+V D P + ++I EN ++Q+ A DGD + R++Y
Sbjct: 251 --------ILVKVQDVEDQPPEFISMTPVSRISENSKVGTSVLQVRAIDGDKGINNRVTY 302
Query: 121 KISAGNPESYFNIDIGSGSL 140
I+ G P F+ID SG++
Sbjct: 303 DITRG-PRHLFDIDATSGTV 321
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKIS 123
V L+VY + +VNDN P P+Y + E+ G ++Q+ A D DL P+ ++ Y+I
Sbjct: 705 VLLVVYFK--DVNDNAPAFERPIYKKNVPEDLPGGTSVLQVKAWDKDLSSPNNKVVYRIQ 762
Query: 124 AGNPESY 130
+G + +
Sbjct: 763 SGAGDKF 769
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +++VNDN P PVY + EN S +VQ+ A+D D RI Y G+
Sbjct: 2330 VTIFLRDVNDNPPTFDVPVYEVTLSENASAGTRVVQVHATDIDAGAFGRIQYTKIIGDGS 2389
Query: 129 SYFNIDIGSGSLG 141
+ F ++ SG +
Sbjct: 2390 AAFEMNPDSGMIA 2402
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 32/148 (21%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIG-------------------------- 55
V+ +D L P+ R +I +GN YF ++
Sbjct: 1191 VKTKDADNPLMPNGRTKIRIISGNDLGYFTLEQTDYWRARLKASESLRGRFGNYSLKLEV 1250
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA--QIVENQSGILPIVQLAASDGDLD 113
DL P++V + + V + NDN P+ + P + ++ EN + IVQ+ A D D+
Sbjct: 1251 QDLGSPPNKVLATLDVCVTDYNDNPPVFISPQHNVTIRVPENMTVGSEIVQVQAKDADIG 1310
Query: 114 PDQRISYKIS---AGNPESYFNIDIGSG 138
P+ + Y++ AG+ + F ID +G
Sbjct: 1311 PNGDVHYRLKQDIAGHHRT-FRIDHKTG 1337
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYI 71
E+ + +V+L + G++ +I ++ S+ N+ + + +G P + L V+I
Sbjct: 992 ESPRELTDMVKLDSETGEVTVANKIDREV-----HSWLNLTVRATDSGIPPRSSLAEVFI 1046
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
QV + NDN P + V + EN I+ L A D D +++Y + + + F
Sbjct: 1047 QVIDENDNNPYFVTDVSNVTVNENSKIGTEIIALKARDPDSGDYGKVTYLLDRMSSQGKF 1106
Query: 132 NIDIGSGSL 140
I SGSL
Sbjct: 1107 AIHPDSGSL 1115
>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
Length = 4349
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
>gi|66773234|ref|NP_001019360.1| protocadherin 2 gamma 17 [Danio rerio]
gi|51557431|gb|AAU06402.1| protocadherin cluster 2 gamma 17 [Danio rerio]
Length = 956
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+S FNI + + +G P V ++V ++NDN P+ Y AQ++EN + L I +
Sbjct: 423 QSQFNITVTATDSGSPALSSSKTVSLKVSDINDNAPIFDQKSYSAQLIENNTPGLSICSV 482
Query: 106 AASDGDLDPDQRISYKIS----AGNP-ESYFNIDIGSGSL 140
A D D + + R+SY + +G P SY +I+ +G L
Sbjct: 483 TARDLDWNQNSRVSYYLEDAHISGVPISSYVSINAENGVL 522
>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
Length = 3819
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y I+ + +D P + + + +VNDN P+
Sbjct: 406 TDGPLDREEIPEYNITV----------LATDRGKPPLSSSTSITLHIADVNDNAPVFGQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 FYLVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P+ Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 1893 VLLNIIDVNDNAPVFGQAFYLVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLE 1952
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 1953 PRALASYVSVSAQSG 1967
>gi|66773340|ref|NP_001018871.1| protocadherin 1 gamma 3 precursor [Danio rerio]
gi|50881548|gb|AAT85354.1| protocadherin cluster 1 gamma 3 [Danio rerio]
Length = 939
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AG 125
+++I V + NDNVP+ PVY + EN I++++A+D D P+ ++Y+ S +
Sbjct: 226 VIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFSRISD 285
Query: 126 NPESYFNIDIGSGSL 140
F+ID +G +
Sbjct: 286 KASKLFSIDKKTGQI 300
>gi|344280988|ref|XP_003412263.1| PREDICTED: protocadherin-16 [Loxodonta africana]
Length = 2693
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV--------------- 65
+ L ASD D+ + ++ Y I G+P F +D+ S G +
Sbjct: 1164 LTTLRASDPDVGANGQLQYHILDGDPSGAFVLDVASGEFGTMRSLDREVEPVFQLKIEAR 1223
Query: 66 ---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
L+V + V + ND+ P P Y ++ E+ ++QL A D D P+
Sbjct: 1224 DGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDEGPNG 1283
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R++Y + AG ++ ++ GSG L
Sbjct: 1284 RVTYYLGAGAAGAFL-LEPGSGEL 1306
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P + + V + V +VNDN P+ Y+ + E+ ++ + AS
Sbjct: 1963 YNLTVAAADRGQPPRSSAVPVTVIVLDVNDNPPVFTRASYHMAVPEDTPVGAELLHVEAS 2022
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P + + +S+G+P F +D +G+L
Sbjct: 2023 DADPGPHGLVRFTLSSGDPLGLFELDESTGAL 2054
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A+D D +ISY ++A
Sbjct: 1549 FSVLTVTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEANDLDQGSGGQISYSLAAS 1608
Query: 126 NP-ESYFNID 134
P F++D
Sbjct: 1609 QPARGLFHVD 1618
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
VY+ V+ V + NDN P Y A + + ++++ A D D P R+SY I A
Sbjct: 64 VYVKVF--VSDENDNPPQFYPREYAASLSTQSTPGTAVLRVRAHDPDQGPHGRLSYHILA 121
Query: 125 GNPESYFNIDIGSGSL 140
GN F +D SG L
Sbjct: 122 GNSPPLFALDEHSGLL 137
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 1749 GPHEGRANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGLISY 1808
Query: 121 KISAGNPESYFNIDIGSGSL 140
+++ P+ F++D +G+L
Sbjct: 1809 HLAS--PDEGFSVDPNNGTL 1826
>gi|190336593|gb|AAI62450.1| Protocadherin 1 gamma 3 [Danio rerio]
Length = 939
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AG 125
+++I V + NDNVP+ PVY + EN I++++A+D D P+ ++Y+ S +
Sbjct: 226 VIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFSRISD 285
Query: 126 NPESYFNIDIGSGSL 140
F+ID +G +
Sbjct: 286 KASKLFSIDKKTGQI 300
>gi|350581232|ref|XP_003480993.1| PREDICTED: protocadherin gamma-B7-like [Sus scrofa]
Length = 809
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 405 TDGTLDREQ---------TPE--YNVTITATDRGKPPLSTSTTITLHIADVNDNAPVFQQ 453
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++A D DL P+ +SY + AG+ E SY ++ SG
Sbjct: 454 ASYEVHVAENNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALASYVSVSAQSG 511
>gi|324499643|gb|ADY39852.1| Protein dachsous [Ascaris suum]
Length = 2824
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 4 DPVYYAQIVENQSG-ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
D +++A I NQ+G + QL D + + + + + A +P S+ N
Sbjct: 2196 DDMFWAGI--NQNGDVFLKRQL-----DHERNHSLKFAVEASSPNSFAN----------- 2237
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+V++Q+ +VNDN P I E+ I +++ASD D + R++YKI
Sbjct: 2238 --ATTVVHVQILDVNDNSPQFYINTNKVVIDEHMKRGTLISKISASDRDSGDNGRLTYKI 2295
Query: 123 SAGNPESYFNIDIGSGSL 140
+GN F +D SG+L
Sbjct: 2296 LSGNDHQMFRLDPFSGAL 2313
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++I V++VN++ P L + E S I + A D D RI+Y I AGN +
Sbjct: 1433 LFIDVKDVNNHTPYFLS-ASNVSLDERMSSSGIIHYVVAKDDDDGESARITYSIVAGNQD 1491
Query: 129 SYFNIDIGSGSLG 141
S+F+ID +G+L
Sbjct: 1492 SWFHIDSNTGALS 1504
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 26/156 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---------------------- 46
A + E+Q +P + ASD D + I+Y + P
Sbjct: 850 AYVPEDQPPHVPFFAVQASDKDRGQNGEITYSLVHSEPPCPITVRPLTGELALSAALDYE 909
Query: 47 -ESYFNIDIGSDLTGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
FN+ I + G P + + V + V +VNDN P+ +Y ++ E+ + + I+
Sbjct: 910 VTRRFNLVIKARDQGIPPRSNNITVTLNVIDVNDNAPIFEMQLYGVEVAEDIAPMTEILA 969
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D D + + +I+++ + PE F I SGS+
Sbjct: 970 VKAKDIDSERNAKITFRFAEEIPE--FGIHPRSGSV 1003
>gi|449677345|ref|XP_002162352.2| PREDICTED: protocadherin Fat 1-like [Hydra magnipapillata]
Length = 2676
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IG 55
+Y + EN+ I++L A D D +++Y I +GN YF + IG
Sbjct: 2500 KIYNETLDENKKIGSKILELLAKDKDAGEHSKLNYYIISGNERGYFGTESVHRVDGSSIG 2559
Query: 56 ----------SDLTGGPDQV---------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D+ Q+ + VYI++++VNDN P+ + +Y + I+EN
Sbjct: 2560 FVTVAKALDREDIEEFALQITASDSKYNAFAWVYIKIRDVNDNDPVFDESLYNSTIIENS 2619
Query: 97 SGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D Q I+Y +S + YF ID +G +
Sbjct: 2620 KSGIFVIKVHATDKDTASVQLPITYSLSL-EIQGYFIIDKNTGEI 2663
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 25/156 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------------- 44
L + ++ E +S + + Q+ A+D D D + ++ Y +
Sbjct: 2390 FVLSTYEFGKVAEGKSAGVIVEQVNATDADSDINGKVLYSLEPSAEADMFSIDPVTGQIR 2449
Query: 45 ---------NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
P+ FN+ G + V IQ+ +VNDN P +Y + EN
Sbjct: 2450 TKVVFDREITPKLTFNVKAEDQAIGKRLSSVVYVTIQITDVNDNEPYFEKKIYNETLDEN 2509
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
+ I++L A D D +++Y I +GN YF
Sbjct: 2510 KKIGSKILELLAKDKDAGEHSKLNYYIISGNERGYF 2545
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVY-YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V+IQ+ +VNDN P+ + Y + ++ E +S + + Q+ A+D D D + ++ Y +
Sbjct: 2376 VFIQIIDVNDNTPLFVLSTYEFGKVAEGKSAGVIVEQVNATDADSDINGKVLYSLEPSAE 2435
Query: 128 ESYFNIDIGSGSL 140
F+ID +G +
Sbjct: 2436 ADMFSIDPVTGQI 2448
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP-IVQL 105
++Y ++I + G +Y ++ N+NDN P + EN SGI+P ++ L
Sbjct: 495 DAYLFMEITIRVEGSQQFTKTALYTEIINLNDNPPEFFRSAVTVYVKEN-SGIIPSLLCL 553
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D ++ + Y I +GN + F I+ +G L
Sbjct: 554 FATDK--DGNEALKYSIESGNIGNVFQINSETGQL 586
>gi|426247588|ref|XP_004017563.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Ovis aries]
Length = 3324
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +V+DN P YYA I E+ PI+ ++ASD D+ +SY +++GN +
Sbjct: 2603 VSIEVLDVDDNPPAFSSLEYYAHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGNEK 2662
Query: 129 SYFNIDIGSGSL 140
+F ++ +G L
Sbjct: 2663 QHFCLEEKTGVL 2674
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 23/144 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
YYA I E+ PI+ ++ASD D+ +SY +++GN + +F ++ + +
Sbjct: 2622 YYAHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGNEKQHFCLEEKTGVLSLIKPLD 2681
Query: 61 ------------GPDQ-----VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
D+ + IV++ V + ND+ P + P + EN I
Sbjct: 2682 YEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPENLPVFSTIC 2741
Query: 104 QLAASDGDLDPDQRISYKISAGNP 127
+ A D D P ++Y I + P
Sbjct: 2742 SVNALDFDAGPYGDMTYSIVSPCP 2765
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1680 LYEASVKENQNPGEFVTRVEAMDRDSGINSKLQFEIMPGASFRLFQINPDTGEVVTATTL 1739
Query: 60 ----------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG + ++ V + ND+ P P +++ENQ L
Sbjct: 1740 DREVQEVLTLRVLVRDGGAPALSGTTVILCTVGDENDHAPEIAVPRDNIEVLENQEPGL- 1798
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ASD D + ++Y I +GN + YF I+ SG L
Sbjct: 1799 VYTFLASDMDAGSNGAVTYHIISGNTDEYFAINEMSGEL 1837
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + VQ++ND+ P VY + E Q IVQ+ A+D D + + Y I
Sbjct: 2175 RAYSKVAVFVQDLNDHPPHFEQSVYQVSVSEGQFYNHHIVQVFATDQDSGSNGLVEYSIL 2234
Query: 124 AGNPESYFNIDIGSGSL 140
+GN + F +D SG L
Sbjct: 2235 SGNQGNVFQMDPLSGVL 2251
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+ DL P +V I V++VNDN P+ L VY A + E+ +Q+ ASD D
Sbjct: 621 VAHDLGEPPLSATCLVSITVEDVNDNEPVFLKQVYNATLPEHAPVGHCFLQVKASDAD 678
>gi|312071752|ref|XP_003138753.1| cadherin domain-containing protein [Loa loa]
gi|307766087|gb|EFO25321.1| cadherin domain-containing protein [Loa loa]
Length = 1638
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 60 GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G P + Y IVY+ V + NDN P P Y Q+ ++ ++++ A+D D+ + I
Sbjct: 200 GNPSRSGYCIVYVNVLDANDNPPTFRQPRYDVQLNRSELSDATLLRVQATDADVGDNGLI 259
Query: 119 SYKISAGNPESYFNIDIGSG 138
SY+ NP YF ID +G
Sbjct: 260 SYRFIT-NPSEYFKIDHNTG 278
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I VQ+VNDN P T +P YY A + E+Q P+ + A+D D D R+ Y+IS GN
Sbjct: 782 VVITVQDVNDNDP-TFNPKYYEANVGEDQPPGTPVTTVTATDP--DEDSRLHYEISTGNT 838
Query: 128 ESYFNIDIGSG 138
F I +G
Sbjct: 839 RGRFAITSQNG 849
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P +P+Y + I+E+ ++Q++A+D D+ + RI Y +S + E
Sbjct: 995 VEISVTDVNDNAPAFKNPLYQSSILEDALVGTSVIQVSATDPDIGLNGRIKYLLSDRDQE 1054
Query: 129 -SYFNIDIGSGSL 140
F ID SG++
Sbjct: 1055 DGSFVIDPTSGTI 1067
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI 68
A +V++Q +PI ++ + G + + + S +SY + SD+ +
Sbjct: 514 AGVVQDQE--MPIFRIDSRSGVISTRSSLDRETS----DSYHMLVTASDMAAAQSERKTA 567
Query: 69 ---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISA 124
V +++ + NDN P + Y Q+ E+Q G + + A+D D + I Y I
Sbjct: 568 TASVVVKILDDNDNYPQFSERTYTVQVPEDQWGDDNNVAHIRATDADQGNNAAIRYAIIG 627
Query: 125 GNPESYFNIDIGSG 138
GN +S F+ID SG
Sbjct: 628 GNTQSQFSIDSMSG 641
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
T +P YY A + E+Q P+ + A+D D D R+ Y+IS GN F I
Sbjct: 795 TFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEISTGNTRGRFAITSQNGRGL 852
Query: 54 --IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 853 ITIAQPLDYKQEKRFLLTVTATDSGGRSDTSTVHINITDANNYAPIFENAPYSASVFEDA 912
Query: 97 SGILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 913 PIGTTVLVVSATDSDVGINAQITYSL 938
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
DQ + VY++ ++NDN P L Y A I E + + +++++ASD D + I Y +
Sbjct: 1358 DQATVQVYMK--DINDNAPKFLKDFYQATISELAANLTQVLRVSASDVDEGSNGLIHYSV 1415
Query: 123 SAGNPESYFNIDIGSGSL 140
GN E F ID +G +
Sbjct: 1416 VKGNEEKMFAIDSATGQV 1433
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-FNID------------ 53
Y + EN ++ + ASDGDL + + + + E F +D
Sbjct: 754 YEVSVAENAPAGTDLLVIEASDGDLGDNGTVRFSFQEADTEQRSFRLDPVSGRLSTISSL 813
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ DL P V + + +VNDN P+ Y+A I EN+
Sbjct: 814 DREEQAFYSLLVLAVDLGSPPQTSLTRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGSY 873
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++ASD D P+ + Y ISAG+ S F I +G
Sbjct: 874 ITTVSASDPDSGPNGTVKYSISAGD-TSRFQIHSHTG 909
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ D + A+I+EN S I+ ++A D D P+ ++ Y
Sbjct: 2816 PFSSYEKLAIAVLDVNDNSPVFKDDPFVAEILENLSP-RTILTVSAIDKDSGPNGQLEYN 2874
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I +G +
Sbjct: 2875 IVNGNTENSFSIHHSTGEI 2893
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G +D + R++ ++ +Y + +D P V + + ++NDN P+ +Y
Sbjct: 2266 GTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVAVIILDINDNNPVFAKALY 2325
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+I EN IVQ+ A+DGD + ++ Y + +GN F ID +G L
Sbjct: 2326 KVEINENTLTGTDIVQVYAADGDEGTNGQVRYSLLSGNENQEFRIDSVTGIL 2377
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
I+Q+ A D D + +++Y + GN ++ F + +L
Sbjct: 2445 ILQVVARDDDQGSNSKLTYTLIGGNEDNAFILSASGELKVRQKLDRETKEKCILLITATD 2504
Query: 59 TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+G P V + V +VNDNVP Y A I E+ ++ ++ASD D +
Sbjct: 2505 SGSPALTGTGTVNVIVSDVNDNVPTFAHKTYSATISEDAPTGSDVLLVSASDADASTNAV 2564
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
ISY++ GN S F I+ +G +
Sbjct: 2565 ISYRLIGGN--SQFTINPSTGQI 2585
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT----- 59
VY + EN + + ++AS DL+ + I+Y I+ G+ + F I+ + LT
Sbjct: 963 VYSFVVFENVALGYHVGSVSASTMDLNTN--ITYVITTGDQKGVFAINQVTGQLTTASII 1020
Query: 60 ---------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG IV I V+++NDN P L V + +VEN I Q
Sbjct: 1021 DREEQSFYQLKVVASGGMVTGETIVNITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQ 1080
Query: 105 LAASDGDLDPDQRIS----YKISAGNPESYFNIDIGSGSL 140
A LDPD+ I+ Y + NP++ F ID +G++
Sbjct: 1081 AKA----LDPDEGINGMVLYSLKQ-NPKNLFTIDEKNGNI 1115
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---LT 59
L Y A I E + + +++++ASD D + I Y + GN E F ID + L
Sbjct: 1377 LKDFYQATISELAANLTQVLRVSASDVDEGSNGLIHYSVVKGNEEKMFAIDSATGQVILA 1436
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1437 GQLDHEATASYSLLIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1496
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + I Y I+ N F+I +G +
Sbjct: 1497 GELVTSVTATDSDSGDNADIHYSITGTNNHGTFSISPNTGGI 1538
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------ 56
A + E+QS + ++A D D + I+Y IS+GN F I+ +
Sbjct: 3264 ATVPESQSVGSIVRTVSARDRDAAMNGLITYHISSGNENGLFAINASTGTLTLAKPLDYE 3323
Query: 57 -----DLT-----GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
++T GG Y + I V +VNDN P+ + Y ++EN +++
Sbjct: 3324 LHQKHEMTISATDGGWRARTSYCSIIINVLDVNDNSPIFIPEEYSPTVLENAPSGTTVMR 3383
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID SG
Sbjct: 3384 LNATDADSGSNAVIAYSLQSSDSD-LFVIDPNSG 3416
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN IVQ+ A+DGD + ++ Y + +GN F ID
Sbjct: 2324 LYKVEINENTLTGTDIVQVYAADGDEGTNGQVRYSLLSGNENQEFRIDSVTGILSVAKPL 2383
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+D P V I + ++ND VP+ Y I EN +
Sbjct: 2384 DREKKAMYSLTVQSADRGSSPRMDTTKVDIILLDINDFVPVFELSPYSINIPENLEALPK 2443
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYF 131
I+Q+ A D D + +++Y + GN ++ F
Sbjct: 2444 TILQVVARDDDQGSNSKLTYTLIGGNEDNAF 2474
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 32/158 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS----YKISAGNPESYFNIDIGS-- 56
L V + +VEN I Q A LDPD+ I+ Y + NP++ F ID +
Sbjct: 1060 LQAVEWVNVVENWQAGHSIFQAKA----LDPDEGINGMVLYSLKQ-NPKNLFTIDEKNGN 1114
Query: 57 -------DLTGGPDQVYL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D+ G QV + I+ + V +VNDN P+ Y + E
Sbjct: 1115 ISLLRPLDVHAGSYQVEILASDRGVPQLSSSFILTVSVHDVNDNPPVFDQLSYEVTLSEA 1174
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
Q ++ ASD D + I+Y I+ GN + F I
Sbjct: 1175 QPVNSLFFKVQASDQDSGANGEIAYSIAEGNTGNAFGI 1212
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGG--- 61
Y ++EN +++L A+D D + I+Y + + + + F ID S + T G
Sbjct: 3367 YSPTVLENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSD-LFVIDPNSGVITTQGFLD 3425
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3426 YETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEVSEAASKGTVV 3485
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3486 GEVFASDRDMGVDGEVHYLIFGTSRKKGFQINSRTGQI 3523
>gi|348523816|ref|XP_003449419.1| PREDICTED: protocadherin-7-like [Oreochromis niloticus]
Length = 1255
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 231 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVMITDVNDNSPRFEKSVY 280
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN S PI+QL A+D D+ + +I Y A +D +G L
Sbjct: 281 EADLPENSSPGAPILQLKAADADVGVNGQIEYVFGAATESVRRLLRLDESTGWL 334
>gi|291238398|ref|XP_002739116.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii]
Length = 2257
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT-- 59
L+P Y+ +++ + + +V + A+D D++ + ++Y +++GN +F ID + +
Sbjct: 1551 LNPASYSALLDEDTPVGTVVFDVDATDADINENADLTYALTSGNDLGHFTIDQDTGIITV 1610
Query: 60 ---------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V + + +VNDN P Y + EN
Sbjct: 1611 EQLLDRETVDAYNMIVTVTDDGTPTRSNTADVTLNLNDVNDNAPTFTMATYAFVVQENVD 1670
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ QLAA+D DL + I+Y I +G +F I+ +G +
Sbjct: 1671 ISTSVGQLAATDPDLGANGFIAYSIESGANSDHFAINSNTGEI 1713
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV-QLAASDGDLDPDQRISYKISAGNPES 129
+ + +VNDN P+ L+P Y+ +++ + + +V + A+D D++ + ++Y +++GN
Sbjct: 1539 VLITDVNDNDPI-LNPASYSALLDEDTPVGTVVFDVDATDADINENADLTYALTSGNDLG 1597
Query: 130 YFNIDIGSG 138
+F ID +G
Sbjct: 1598 HFTIDQDTG 1606
>gi|351710309|gb|EHB13228.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Heterocephalus
glaber]
Length = 3064
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y ++ EN ++ + A+DGD + + Y++ G F ID S +
Sbjct: 186 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSGVVRTRAVVD 244
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 245 REEAAEYQLLVEANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNT 304
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 305 PVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 344
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 292 YVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 351
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 352 FEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHS 411
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ + A D D + R+ Y++ +D S +LG
Sbjct: 412 VLHIQAVDADAGENSRLRYRL----------VDTSSAALG 441
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLT------ 59
Y + E+ ++Q++A+D D P+ R+ Y G+ F I+ S +
Sbjct: 725 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 784
Query: 60 -----------------GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + V IQV ++NDN P+ + VE S +
Sbjct: 785 DRENVAVYSLRALAVDRGSPAALSASVEIQVTVLDINDNPPV-FERDELELFVEENSPVG 843
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 844 SVVAKIRANDPDEGPNAQIMYQIVEGNMPEVFQLDLLSGDL 884
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + + G+ T
Sbjct: 622 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPNTGTIYTMTELDYE 681
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I Q+ NDNVP L Y + E+ ++Q
Sbjct: 682 DQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNVPRFLRDFYQGSVFEDAPPSTSVLQ 741
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 742 VSATDRDSGPNGRLLY 757
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ P+Y ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 501 VSITVLDVNDNDPVFTQPLYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 558
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 559 NRFALSSQSG 568
>gi|223462239|gb|AAI50816.1| Pcdha6 protein [Mus musculus]
Length = 900
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 37/150 (24%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------------GPDQVYLI 68
ASD D+ + ++YK+S P YF +D+ S+ G P+ L+
Sbjct: 156 GASDADVGLNSMLTYKLS---PSEYFGLDVKSNSDGNKQIRLLLKKSLDREDAPEHKLLL 212
Query: 69 ---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ + V +VNDN P P Y +I+EN +++L ASD D
Sbjct: 213 TATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDKDEG 272
Query: 114 PDQRISYKISAGNPE---SYFNIDIGSGSL 140
+ ISY + P F+ID +G +
Sbjct: 273 TNSAISYSFNRLVPPKTLEQFSIDADTGEI 302
>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
leucogenys]
Length = 4007
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVMVVAARDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2401 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2460
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2461 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2514
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDN 79
+V++ S G++ Q + Y+ + +F++ + + G P +V + V ++NDN
Sbjct: 1980 VVEIDGSTGEMSTVQELDYEA-----QQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDN 2034
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
P P Y A + E + ++++ A D D R+ Y I +GN + +F
Sbjct: 2035 PPEFRQPQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2086
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ + +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTVAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
>gi|350581220|ref|XP_003480990.1| PREDICTED: hypothetical protein LOC100736877 [Sus scrofa]
Length = 1791
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 1358 TDGALDREQ---------TPE--YNVTITATDRGKPPLSTSTTITLHIADVNDNAPVFQQ 1406
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++A D DL P+ +SY + AG+ E SY ++ SG
Sbjct: 1407 ASYEVHVAENNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALASYVSVSAQSG 1464
>gi|167517024|ref|XP_001742853.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779477|gb|EDQ93091.1| predicted protein [Monosiga brevicollis MX1]
Length = 3395
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------------- 57
+ EN + ++ I Q++A+D D P + Y + N S+F I+ S
Sbjct: 2396 VTENTADVV-IFQVSATDADTSPFATLVYFLY--NASSHFAINSTSGEVSLVQGLDYEAA 2452
Query: 58 -----LTGGPDQ------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ G DQ + + +QV +VNDN P+ Y +VEN + L + Q+
Sbjct: 2453 SSVIVVIGASDQGAETPNAFFTLTVQVDDVNDNFPIFDATSYSGDVVENSTTALVVGQVW 2512
Query: 107 ASDGDLDPDQRISYKISAGNP 127
A+D D D ++Y I +P
Sbjct: 2513 ATDADADGLAAVTYSIEPRDP 2533
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAG--------------------NPE 47
I EN + + + ++A+D DLD R+ + S+G
Sbjct: 2189 SIAENSTVGVTLGSVSATDADLDDAGRVRFSFVGSSGRFSLNALSGTITLASALDYETQS 2248
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +++ + ++ G P L+ + I V +VNDN P Y +++E Q+G+ + L+
Sbjct: 2249 TTYSLVVKAEDLGSPALSTLLNITITVTDVNDNAPSFAQSAYPFEVLEGQTGL--VYHLS 2306
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNID 134
A+D D + I+Y + S+FNID
Sbjct: 2307 ATDADSGINAMITYSLVPSANASHFNID 2334
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 28/154 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
+++E Q+G+ + L+A+D D + I+Y + S+FNID ++T
Sbjct: 2293 EVLEGQTGL--VYHLSATDADSGINAMITYSLVPSANASHFNIDQNGNITLVVPFDREQT 2350
Query: 60 ------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P V + ++++NDN P+ +P + +V + + I Q++
Sbjct: 2351 TYVEFDVMATDGGSPALSTTTQVVVLIRDINDNAPV-FNPSFDQVLVTENTADVVIFQVS 2409
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D P + Y + N S+F I+ SG +
Sbjct: 2410 ATDADTSPFATLVYFLY--NASSHFAINSTSGEV 2441
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 69 VYIQVQNVNDNVPMTL-----DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
V ++++++NDN+P+ + + Y A + ENQ+ +VQL + D D D + Y I+
Sbjct: 618 VVVRIEDINDNLPVFVGNVGSNAAYQADVEENQAVGTTVVQLVVT--DRDADLNVVYGIT 675
Query: 124 AGNPES---YFNIDIGSG 138
+P S YF ID +G
Sbjct: 676 EVSPSSASGYFAIDNSTG 693
>gi|317420153|emb|CBN82189.1| Cadherin-20 [Dicentrarchus labrax]
Length = 797
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
S GD+ QR+ ++ A + + LT P + +++Q++NDN P LD
Sbjct: 103 STGDIHAIQRLDREVKA---QYILRAQARNRLTDRPLEPESEFIVKIQDINDNEPRFLDG 159
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
Y A + E ++QL A+D D DP R+ Y I G P YF++D +G
Sbjct: 160 PYQASVPEMSKIGTSVIQLTATDAD-DPTYGNSARVVYSILEGQP--YFSVDAKTG 212
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + IV++ V++V D P+ P YY ++ E+ + ++A D D + + Y
Sbjct: 359 GPFKDVTIVHVSVEDV-DEPPLFDSPAYYIELPEDAEIGTVLKTVSARDPDA-ANNTVRY 416
Query: 121 KIS-AGNPESYFNIDIGSGSL 140
I + +PE YF I+I SGSL
Sbjct: 417 SIERSTDPEKYFYIEITSGSL 437
>gi|348514377|ref|XP_003444717.1| PREDICTED: protocadherin gamma-A4-like [Oreochromis niloticus]
Length = 597
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AGN 126
++I V + NDN P+ +PVY A++ EN I ++A+DGD + ++Y I+ A
Sbjct: 223 IHITVLDANDNAPLCSEPVYKAEVKENSPEGKVITTVSANDGDKGVNGEVTYSIAHVAKE 282
Query: 127 PESYFNIDIGSGSL 140
+ F++++ +G +
Sbjct: 283 TKQLFDVNVKTGEI 296
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP-- 62
Y + EN ++ I + ASD D P+ I Y I+ GN + F+ID S +L+ P
Sbjct: 1859 CYGLSVPENSEAVV-IHTVVASDMDEGPNADIIYSITGGNLGNKFSIDARSGELSCRPLD 1917
Query: 63 ---------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
Q + + + V++ NDN P P Y A + E+
Sbjct: 1918 REQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAPRFDLPKYVASVAEDAPLGAS 1977
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V++ A+D DL + R+ Y + A + F ID SG
Sbjct: 1978 VVRIKATDADLGVNARLVYSL-ANETQWQFAIDSKSG 2013
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 176 PAMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYL 235
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + + V I +Q+VNDN P+ Y+A +
Sbjct: 236 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 295
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D + + + Y I+ + E F ID +G++
Sbjct: 296 ENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAI 344
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 672 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 719
Query: 89 YAQIVENQ-----SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ + +P+V + A+D D ++SY+I AGN F ID SG +
Sbjct: 720 NVSLKESPPTQTPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEI 776
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 67 LIVYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKIS 123
+ V I V + NDN P+ Y A+I E I QL A D D + P+ + Y I+
Sbjct: 2740 ITVVITVLDANDNFPIFDRSAKYEAEISELAPLRYSIAQLVALDADQENSPNSEVVYDIT 2799
Query: 124 AGNPESYFNIDIGSGSL 140
+GN E F ID+ SG L
Sbjct: 2800 SGNDEHMFTIDLVSGVL 2816
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 32/164 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESYFNIDIGS-------- 56
Y A+I E I QL A D D + P+ + Y I++GN E F ID+ S
Sbjct: 2762 YEAEISELAPLRYSIAQLVALDADQENSPNSEVVYDITSGNDEHMFTIDLVSGVLFVNNR 2821
Query: 57 -DLTGGPDQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D G LI+ ++++ + NDN P Y I EN+
Sbjct: 2822 LDYDSGATSYELIIRACDSHHPRPLCSLQPFHLELHDENDNEPKFPLSEYVHFIAENEPV 2881
Query: 99 ILPIVQLAASDGDLDPDQRISYKI--SAGNPESY--FNIDIGSG 138
+ Q ASD D P ++Y + ++G+ S+ F +D SG
Sbjct: 2882 GSSVFQAHASDLDRGPFGALNYSLAPASGDDSSWKLFRVDSHSG 2925
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I + +VNDN P Y V S + I + ASD D P+ I Y I+ GN
Sbjct: 1840 VVITIGDVNDNAPEFRPGSCYGLSVPENSEAVVIHTVVASDMDEGPNADIIYSITGGNLG 1899
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1900 NKFSIDARSGEL 1911
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 25/138 (18%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD + Y I +G+P+ YF I+ GS T G
Sbjct: 850 ATSGDTAHRSPVRYSIYSGDPDGYFGIEGGSGNIRIARPLDHEAKGQVLLNIQATAGEPP 909
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + EN P+ A D D +++Y +
Sbjct: 910 VYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDSGSSGQVTYSL 969
Query: 123 SAGNPESYFNIDIGSGSL 140
+ F ID SG L
Sbjct: 970 A--RERQLFAIDPRSGHL 985
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 26/148 (17%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--GSDLTGGPDQVYL--------- 67
+P+V + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 736 IPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEIFVTRPDSLSVRTQPMHMLN 795
Query: 68 ---------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+V++ + + P+ Y + E+ + + A+ GD
Sbjct: 796 ISATDGGGLRTGHDAVVFLSIIDALQRPPIFEKARYNYYVKEDIPQGTVVGSVIATSGDT 855
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Y I +G+P+ YF I+ GSG++
Sbjct: 856 AHRSPVRYSIYSGDPDGYFGIEGGSGNI 883
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------DLTGG--- 61
+ + A D D + R++Y I GN E F I + D G
Sbjct: 1631 VAHVVALDRDAGDNGRLAYDIEGGNGEGRFRISAATGVIELVKSLPPASEDADKNGRFTL 1690
Query: 62 -----------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P + L + + VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1691 LISAVDHGLPEPRKSTLSLQLLVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSF 1750
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I +G F++D G
Sbjct: 1751 HGGDNANLSYEIPSGIAGDLFHVDWQRG 1778
>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
Length = 4878
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + + + + NDN P+ + + E + G L ++Q+ A D D + RI+Y
Sbjct: 2633 PLSAYHNLILDILDENDNAPVFSQHFFNTSVAEGEYGSLNVLQVTAVDADTGDNARITYA 2692
Query: 122 ISAGNPESYFNIDIGSGSL 140
+ AGN F ID SG +
Sbjct: 2693 LEAGNEAGMFVIDKTSGGI 2711
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 24/145 (16%)
Query: 19 LPIVQLAASDGDLDPDQRISY----------KISAGNPE------------SYFNIDIGS 56
L + Q++A D D R++Y KI++ N E ++ + I +
Sbjct: 2258 LHVAQISARDDDTGAYGRVTYSIIEGERSLFKINSSNGEITALRTLDREEMDHYELTISA 2317
Query: 57 DLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P ++ I+V + NDN P Y A+++ENQ+ + +V++ A+D D +
Sbjct: 2318 MDAGSPRLTGTGMISIRVGDDNDNKPRFEHDQYSAEVMENQAAMTTVVKVTATDRDTGKN 2377
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
I Y + + F ID SG +
Sbjct: 2378 ADIKYSLQ-NDASGRFGIDQSSGEV 2401
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 25/154 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A+++ENQ+ + +V++ A+D D + I Y + + F ID
Sbjct: 2350 YSAEVMENQAAMTTVVKVTATDRDTGKNADIKYSLQ-NDASGRFGIDQSSGEVFTLMSLN 2408
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ +D P + + ++V + NDNVP L Y QI + I
Sbjct: 2409 REERDVYNLVAVATDSGSLPLSSTVSIIVKVNDDNDNVPKFLLDEYNVQIRDPTRAGWFI 2468
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
+ A D D RI Y + G D G
Sbjct: 2469 TGVTALDADAGESARIRYSLLGGTETFSIEEDTG 2502
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I V + NDN P+ DP Y+ Q+ EN + I++++A+D D + + Y I+ G+
Sbjct: 1912 VLINVIDTNDNAPI-FDPSTYSDQVWENATIGTQIMEVSATDVDSGMNGWVRYSITGGDI 1970
Query: 128 ESYFNIDIGSG 138
+ +F +D +G
Sbjct: 1971 DHHFEVDQATG 1981
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y I EN + + ASD D+ + ++Y +++GN YF ID
Sbjct: 2975 YSMSIEENWQVGRVVGTVTASDADIGANAELTYSVTSGNGTDYFVIDAETGVISLSASVA 3034
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTL--DPVYYAQIVENQSGIL 100
SD P V + V +N N P D Y + E++
Sbjct: 3035 SKVNKKFQLTVAASDRGAAPRSSSTSVMVSVLEINRNAPRFTGSDQAYQTSVPESRLIGS 3094
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++ A+D D P+ ISY I+ GN F ID G
Sbjct: 3095 TIGKVTATDNDSGPNGEISYAIANGNDLGLFVIDPTEG 3132
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 53/143 (37%), Gaps = 24/143 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
D Y + E++ I ++ A+D D P+ ISY I+ GN F ID
Sbjct: 3079 DQAYQTSVPESRLIGSTIGKVTATDNDSGPNGEISYAIANGNDLGLFVIDPTEGYISTVK 3138
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD V+ + I + + NDN P + +Y + EN
Sbjct: 3139 ELDYEQTHSVQLNITASDHGSRVKTVWKVFIITITDENDNGPQFDEAIYRTSVEENSPRG 3198
Query: 100 LPIVQLAASDGDLDPDQRISYKI 122
+ L A D D P+ I Y +
Sbjct: 3199 TVVFVLTAHDADDPPNDLIKYSM 3221
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 77 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
N+N P+ + Y I EN + + ASD D+ + ++Y +++GN YF ID
Sbjct: 2964 NENTPLFDEKSYSMSIEENWQVGRVVGTVTASDADIGANAELTYSVTSGNGTDYFVIDAE 3023
Query: 137 SG 138
+G
Sbjct: 3024 TG 3025
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNP 127
V I +++VND +P+ +D + A + EN + L + Q++A D D R++Y I G
Sbjct: 2226 VSIDIEDVNDCIPLFVDSPFVAYVQENVIQLPLHVAQISARDDDTGAYGRVTYSIIEGE- 2284
Query: 128 ESYFNIDIGSGSL 140
S F I+ +G +
Sbjct: 2285 RSLFKINSSNGEI 2297
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSDL------ 58
VY I E+ +++++A D DL R Y I+ GN F+++ GS
Sbjct: 3397 VYEGSIREDARVGTTVLKVSAVDNDLQNSFRSFRYSITTGNHGEMFSVNQGSGWVTTNAR 3456
Query: 59 -----------------TGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ---- 96
TG P Q + I + ++NDN P + V I ENQ
Sbjct: 3457 LDREKHGTYNLTVAAVDTGSPPQTGTSSIRIHLDDINDNGPFFIPSVPVGSIRENQPSLS 3516
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ + Q A+D DL P+ R Y+ + N F +D G
Sbjct: 3517 ADIIDLTQF-ANDPDLPPN-RGPYRFTLINNTLEFTVDSTKG 3556
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKIS--------AGNP---------------ESYFNIDIGSD 57
I+++ A D D P+ I+Y IS A +P +S F + +
Sbjct: 713 IIRVQAYDSDEGPNAEITYSISERDDNFPLAVDPRTGWVQTIKQLDREEQSRFAFQVVAK 772
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDP 114
GG P V I VQ+VNDN P T +P YY A + E+Q P+ + A+D D
Sbjct: 773 -DGGVPPKSASSSVVITVQDVNDNDP-TFNPKYYEANVGEDQPQGTPVTTVTATDP--DE 828
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
D R+ Y+I+ GN F I +G
Sbjct: 829 DSRLHYEITTGNTRGRFAITSQNG 852
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 907 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 966
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P+ +P+Y + I+E+
Sbjct: 967 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 1026
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q++ASD D+ + RI Y +S + E F ID SG++
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTV 1070
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQN 75
LPI ++ + G + + + S +SY + SD+ + V ++V +
Sbjct: 523 LPIFRIDSRSGVISTRSSLDRETS----DSYHLLVTASDMAAAQSERKTATASVLVKVLD 578
Query: 76 VNDNVPMTLDPVYYAQIVENQSGIL---PIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
NDN P + Y Q+ E+Q G + + A+D D + I Y I GN +S F+
Sbjct: 579 DNDNYPQFSERTYTVQVPEDQWGGSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFS 638
Query: 133 IDIGSG 138
ID SG
Sbjct: 639 IDSMSG 644
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
T +P YY A + E+Q P+ + A+D D D R+ Y+I+ GN F I
Sbjct: 798 TFNPKYYEANVGEDQPQGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGL 855
Query: 54 --IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 856 ITIAQSLDYKQEKRFLLTVTATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDA 915
Query: 97 SGILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 916 PVGTTVLVVSATDSDVGINAQITYSL 941
>gi|301774933|ref|XP_002922889.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Ailuropoda melanoleuca]
Length = 2838
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y ++ EN ++ + A+DGD + + Y++ G F ID S +
Sbjct: 181 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSGVVRTRAAVD 239
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 240 REEAAAYQLLVEANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNT 299
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 300 PVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 339
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + P++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 287 YVVQVPEDVAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 346
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 347 FEAIREYTLRIKAQDGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 406
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 407 VLHIQAVDADAGENARLRYRL 427
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 720 YQGSVFEDAPPSTSVLQISATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 779
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P + V IQV ++NDN P+ + EN
Sbjct: 780 DRENVAVYNLRALAVDRGSPAPLSASVDIQVSVLDINDNPPVFERDELELFVEENSPVGS 839
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 840 VVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 879
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 496 VSITVLDVNDNDPVFTQPVYELRLNEDAAVGSSVLTLRARDQ--DANSVITYQLTGGNTR 553
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 554 NRFALSSQSG 563
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSDLT-- 59
P Y + EN+ +++L A D D R+SY++ A E YF ID +
Sbjct: 71 PSYQVSVPENEPAGTTVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDTATGAVST 130
Query: 60 ---------------------GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P + YL V V + ND+ P+ Y ++ EN
Sbjct: 131 ARALDRETKDTHVLKVSAVDHGSPRRSAATYLTV--TVSDTNDHSPVFEQSEYRERVREN 188
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+DGD + + Y++ G F ID SG
Sbjct: 189 LEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSG 230
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 617 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 676
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I ++ NDN P L Y + E+ ++Q
Sbjct: 677 DQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 736
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 737 ISATDRDSGPNGRLLY 752
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 58/148 (39%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------DLTG---- 60
+ + A D D + RISY I +GN E F I S D TG
Sbjct: 1010 VTHIVAVDRDAGENGRISYDIVSGNGEGRFRIKAQSGIIELAKTLPPASEQLDKTGRFIL 1069
Query: 61 ----------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P L + + VQ + N P L VY A I+EN ++Q+AA
Sbjct: 1070 TIRASDHGAPSPQHTTLSLQLLVQGSHSNPPRFLQAVYEATILENVPSGSFVLQVAAKAF 1129
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I G E +F++D G
Sbjct: 1130 HGADNANLSYEIPNGVAEDHFHVDWQRG 1157
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDP--VYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKI 122
+ V++ V + NDN P+ DP Y A+I E I QL A D D + P+ + Y I
Sbjct: 2137 ITVFVSVLDANDNAPI-FDPSAKYEAEISELAPLRYSIAQLLALDADQENTPNSEVVYDI 2195
Query: 123 SAGNPESYFNIDIGSGSL 140
S+GN E F ID+ SG L
Sbjct: 2196 SSGNDEHMFTIDLVSGVL 2213
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 29 GELDYERRNSYEFPV----------LATD-RGGLSTTAMI-KLQLTDVNDNRPVFYPREY 76
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ +PIV + A+D D ++SY+I AGN F ID SG +
Sbjct: 77 NVSLRESGPAQGSGSSMPIVAVVATDPDAGSFGQVSYRIVAGNEGGIFRIDRASGEI 133
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 32/164 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESYFNIDIGS-------- 56
Y A+I E I QL A D D + P+ + Y IS+GN E F ID+ S
Sbjct: 2159 YEAEISELAPLRYSIAQLLALDADQENTPNSEVVYDISSGNDEHMFTIDLVSGVLFVNNR 2218
Query: 57 -DLTGGPDQVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D G LI+ + + + NDN P Y + EN+
Sbjct: 2219 LDYDSGATSYELIIRACDSHEPRPLCSLQRFQLSLHDENDNAPQFPLAEYVHSLAENEPL 2278
Query: 99 ILPIVQLAASDGDLDPDQRISYKISA--GNPESY--FNIDIGSG 138
+ + ASD D +++Y + A G+ S+ F +D +G
Sbjct: 2279 GSSVFRAHASDLDRGAFGQLNYSLVAAPGDDSSWRLFRVDAATG 2322
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGN-----------------------PESYFNIDIGSD 57
I+++ A D D P+ I+Y IS + +S F + +
Sbjct: 713 IIRVQAYDSDEGPNAEITYSISERDDNFPLAVDPRTGWVQTIKQLDREEQSRFAFQVVAK 772
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDP 114
GG P V I VQ+VNDN P T +P YY A + E+Q P+ + A+D D
Sbjct: 773 -DGGVPPKSASSSVVITVQDVNDNDP-TFNPKYYEANVGEDQPQGTPVTTVTATDP--DE 828
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
D R+ Y+I+ GN F I +G
Sbjct: 829 DSRLHYEITTGNTRGRFAITSQNG 852
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 907 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 966
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P+ +P+Y + I+E+
Sbjct: 967 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 1026
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q++ASD D+ + RI Y +S + E F ID SG++
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTV 1070
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQN 75
LPI ++ + G + + + S +SY + SD+ + V ++V +
Sbjct: 523 LPIFRIDSRSGVISTRSSLDRETS----DSYHLLVTASDMAAAQSERKTATASVLVKVLD 578
Query: 76 VNDNVPMTLDPVYYAQIVENQSGIL---PIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
NDN P + Y Q+ E+Q G + + A+D D + I Y I GN +S F+
Sbjct: 579 DNDNYPQFSERTYTVQVPEDQWGGSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFS 638
Query: 133 IDIGSG 138
ID SG
Sbjct: 639 IDSMSG 644
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
T +P YY A + E+Q P+ + A+D D D R+ Y+I+ GN F I
Sbjct: 798 TFNPKYYEANVGEDQPQGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGL 855
Query: 54 --IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 856 ITIAQSLDYKQEKRFLLTVTATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDA 915
Query: 97 SGILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 916 PVGTTVLVVSATDSDVGINAQITYSL 941
>gi|348503600|ref|XP_003439352.1| PREDICTED: cadherin-20-like [Oreochromis niloticus]
Length = 797
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
S GD+ QR+ ++ A + + LT P + +++Q++NDN P LD
Sbjct: 103 STGDIHAIQRLDREVKA---QYILRAQARNRLTDRPLEPESEFIVKIQDINDNEPRFLDG 159
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
Y A + E ++QL A+D D DP R+ Y I G P YF++D +G
Sbjct: 160 PYQATVPEMSKIGTSVIQLTATDAD-DPTYGNSARVVYSILEGQP--YFSVDAKTG 212
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
I +D P V++ V +VNDN P Y A + E+ P+ + A+D D
Sbjct: 672 IAADSGEEPKSASATVFLTVTDVNDNDPYFEPKTYEAVVSEDSLAGTPVTTVTATDP--D 729
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
D RI Y+I+ GN F+I +G
Sbjct: 730 EDSRIHYEITGGNTRGRFSISSQNG 754
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGSD 57
Y A + E+ P+ + A+D D D RI Y+I+ GN F+I I
Sbjct: 706 YEAVVSEDSLAGTPVTTVTATDPD--EDSRIHYEITGGNTRGRFSISSQNGRGLITIAQT 763
Query: 58 LTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L ++ +++ VY+ V + N+ P + Y + E+ + +
Sbjct: 764 LDYKQEKRFVLTVTASDTGSRTDTALVYVNVSDANNYSPEFENAPYSVSVFEDAPIGVTV 823
Query: 103 VQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSGSL 140
+ ++A+D D+ + +I+Y ++ N E + F I+ +G++
Sbjct: 824 LVVSATDADVGKNAQITYSLATDNGEQVITEFTINSQTGAI 864
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGS------- 56
Y + E+ + ++ ++A+D D+ + +I+Y ++ N E + F I+ +
Sbjct: 809 YSVSVFEDAPIGVTVLVVSATDADVGKNAQITYSLATDNGEQVITEFTINSQTGAITTTK 868
Query: 57 --DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D P + + V I V +VNDN P+ P Y+ I+E+
Sbjct: 869 ALDRESVPSYLLTVTARDGGVPSLSDTTDVEISVTDVNDNAPVFEAPQYHGSILEDVLLS 928
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++AA+D D D + R+ Y + + + F ID +G
Sbjct: 929 TSVLRVAATDADTDLNGRVRYGLE-DDGDGAFTIDSTTG 966
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY----------------------KIS 42
P Y+ I+E+ ++++AA+D D D + R+ Y KI
Sbjct: 915 PQYHGSILEDVLLSTSVLRVAATDADTDLNGRVRYGLEDDGDGAFTIDSTTGIIRTAKIL 974
Query: 43 AGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Y+ + + G P ++ V I+++++ND+ P + I EN
Sbjct: 975 DRESVAYYTLKAVATDRGSPALSSIVPVTIKIEDINDSPPAFENDKIILYITENSPIGST 1034
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ ++ A D D P+ + Y I G + F++++ G+
Sbjct: 1035 VGEIYAHDPDEGPNAVVQYSIIGGEDSNSFSLNVRQGA 1072
>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
Length = 4349
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPCIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
>gi|73949439|ref|XP_849512.1| PREDICTED: protocadherin gamma-B6 [Canis lupus familiaris]
Length = 819
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD + Y ++ +D P + + + + +VNDN P+
Sbjct: 406 TDGALDREHSPQYNVTI----------TATDRGKPPLSSSISITLHIADVNDNAPVFQQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|328714938|ref|XP_001945353.2| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
Length = 2288
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 31/164 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP- 62
+Y A++ EN+ ++ + A D D RI Y+I+ GN F + G+ GP
Sbjct: 612 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITGGNLGGAFAVKNMTGAIYVAGPL 669
Query: 63 -----DQVYLI-------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--I 102
+ LI V I V++ ND P+ P+Y ++ E SG P +
Sbjct: 670 DYETRKRYELILAASDNFQDSKTTVVINVKDKNDMPPVFNSPLYATEMEEELSGAYPHHL 729
Query: 103 VQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
+Q+ A+DGD D Q I Y ++ NP S F+I+ SG +
Sbjct: 730 LQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTSGEI 773
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 36/153 (23%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGS 56
P+Y ++ E SG P ++Q+ A+DGD D Q I Y ++ NP S F+I+ S
Sbjct: 711 PLYATEMEEELSGAYPHHLLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTS 770
Query: 57 -----------DLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
D G Q V+ Q ++++NDN P+ VY+
Sbjct: 771 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPVFPQGVYW 830
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + + ++ + A D D DP + + K+
Sbjct: 831 GNVTENGTAGMVVMTMTAVDYD-DPAEGTNAKL 862
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI Y
Sbjct: 586 APNSVSKFIRIGIADKNDNPPYFDKALYEAEVDENEDIQHTVLTVTAKDH--DESSRIRY 643
Query: 121 KISAGNPESYFNIDIGSGSL 140
+I+ GN F + +G++
Sbjct: 644 EITGGNLGGAFAVKNMTGAI 663
>gi|292616200|ref|XP_001920988.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2518
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V +VND++P LD + +I E+ +++LAA D D + ++++ + AG+PE
Sbjct: 1123 IHVTDVNDHIPRFLDRSCFVRIPESSEPNTAVIELAAEDADAGENGQLTFSVVAGDPEQK 1182
Query: 131 F 131
F
Sbjct: 1183 F 1183
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDL---- 58
PVY + E+ ++ ++A+D D + ++ Y+I++GN F++ ++G+
Sbjct: 813 PVYEVDVDEDADVGSTVLTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIAQP 872
Query: 59 ---------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPI 102
+ G + Y V + + N ND P+ YY + E G + +
Sbjct: 873 LDYEQNKLYKLHVLASDGKWEHYATVIVTIVNKNDEAPVFSVNEYYGSVTEELDGSPVFV 932
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
+Q+ ASD D D DQ + Y + ES F ID +G +
Sbjct: 933 LQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKI 971
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF------------ 50
LD + +I E+ +++LAA D D + ++++ + AG+PE F
Sbjct: 1136 LDRSCFVRIPESSEPNTAVIELAAEDADAGENGQLTFSVVAGDPEQKFYMVSHRQEQRGT 1195
Query: 51 -NIDIGSDLTGGPDQVY--------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ D +Q + L +++++ ND+VP+ + ++ Q+
Sbjct: 1196 LRLKKRLDYERPGEQRFNLTIKVEDMQYSTLLHCTLEIEDCNDHVPVFIP--HFLQLPAI 1253
Query: 96 QSGILP---IVQLAASDGDLDPDQRISYKISA-GNPESYFNID 134
+ + P + +AASD DL ++ I+Y I+A +P F++D
Sbjct: 1254 REDVAPGTSLASVAASDLDLGLNREITYTIAAESDPYHLFSVD 1296
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISY 120
P + V+I + +VNDNVP +Y A + E + G L ++Q++A+D DL + +ISY
Sbjct: 674 PLAAFTTVHINITDVNDNVPFFTSSIYEASVTEGVEIGTL-VLQVSANDLDLGLNGKISY 732
Query: 121 KI---SAGNPESYFNIDIGSGSL 140
+ +G+ + YF ID G++
Sbjct: 733 SLLNDRSGDFQ-YFRIDPELGTI 754
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 38/171 (22%)
Query: 6 VYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNID--IGSDLT 59
+Y A + E + G L ++Q++A+D DL + +ISY + +G+ + YF ID +G+ T
Sbjct: 699 IYEASVTEGVEIGTL-VLQVSANDLDLGLNGKISYSLLNDRSGDFQ-YFRIDPELGTIFT 756
Query: 60 ------------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
G P+ V I + +VNDN P+ PVY
Sbjct: 757 EAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRIFISDVNDNKPVFAQPVYE 816
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ ++ ++A+D D + ++ Y+I++GN F+++ G++
Sbjct: 817 VDVDEDADVGSTVLTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTI 867
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +++ NVND P+ PVY + E+ + + A D D D I+YKI+AGN E
Sbjct: 253 VRLRMANVNDEPPVFSQPVYRTFVSEDAGPNTLVATVLAKDPDGDG---ITYKITAGNDE 309
Query: 129 SYFNIDIGSG 138
F ID G
Sbjct: 310 GNFVIDSQKG 319
>gi|66773334|ref|NP_001018872.1| protocadherin 1 gamma 2 precursor [Danio rerio]
gi|50881524|gb|AAT85342.1| protocadherin cluster 1 gamma 2 [Danio rerio]
Length = 938
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AG 125
+++I V + NDNVP+ PVY + EN I++++A+D D P+ ++Y+ S +
Sbjct: 225 VIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFSRISD 284
Query: 126 NPESYFNIDIGSGSL 140
F+ID +G +
Sbjct: 285 KTAKLFSIDKTTGQI 299
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 2126 AFSVLTLTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 2185
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2186 SQPARGLFHVD 2196
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2539 TQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFSRASYRMAVPEDTPVGAELLHVE 2598
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2599 ASDADPGPHGLVRFTLSSGDPSGLFELDESSGAL 2632
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 32/163 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 580 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTR 639
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P P YA + QS +
Sbjct: 640 TLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQ-FYPREYAASLSAQS--M 696
Query: 101 P---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P ++++ A D D P R+SY I AGN F +D SG L
Sbjct: 697 PGTAVLRVRAHDPDQGPHGRLSYHILAGNNPPLFALDEHSGLL 739
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------DLTGGPDQVYL-- 67
+V++ A D D + R++Y ++ G +F+ID S +L P + +
Sbjct: 489 VVRVMARDPDQGSNGRVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQPQLIVVAT 548
Query: 68 -----------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 549 DGGLPALASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 608
Query: 117 RISYKISAGNPESY---FNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 609 LLSYSLGAGLGASGSPPFRIDAHSG 633
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 200 PVPELVVT-GELDRENRSQYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 248
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D P+ ++Y+I+ E F+ID +
Sbjct: 249 APAFNQSRYHAVVSESLAPGSPVLQVYASDADAGPNGAVTYEINRRQSEGDGPFSIDAHT 308
Query: 138 GSL 140
G L
Sbjct: 309 GLL 311
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-------------------- 63
L ASD D+ + ++ Y I G+P F +D+ S G
Sbjct: 1745 LRASDPDVGANGQLQYLILDGDPSGAFVLDLASGEFGTTRPLDREVEPAFQLRIEARDGG 1804
Query: 64 ----QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
L+V + V + ND+ P P Y ++ E+ ++QL A D D + + R++
Sbjct: 1805 QPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAEANGRVT 1864
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + G ++ ++ SG L
Sbjct: 1865 YYLGTGAAGAFL-LEPSSGEL 1884
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1669 LDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAH 1728
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y I G+P F +D+ SG G
Sbjct: 1729 LSLEVPEGQDPQT-LTVLRASDPDVGANGQLQYLILDGDPSGAFVLDLASGEFG 1781
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2327 GPHEGRANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDRDSGANGHISY 2386
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F++D +G+L
Sbjct: 2387 HLA--SPAEGFSVDPNNGTL 2404
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 28/143 (19%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSD 57
+ + A D DL R+SY+++AG + YF + + SD
Sbjct: 1538 LHVVARDPDLGEAARVSYRLAAGG-DGYFRLHSSTGALSVVRSLDREQRAEHILTVVASD 1596
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++ + V +VND P Y + EN ++ L A+D DL + +
Sbjct: 1597 HGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ 1656
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
++Y +G F++D +G L
Sbjct: 1657 VTYGGISGE---SFSLDPDTGVL 1676
>gi|190336809|gb|AAI62581.1| Protocadherin 1 gamma 2 [Danio rerio]
Length = 938
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AG 125
+++I V + NDNVP+ PVY + EN I++++A+D D P+ ++Y+ S +
Sbjct: 225 VIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFSRISD 284
Query: 126 NPESYFNIDIGSGSL 140
F+ID +G +
Sbjct: 285 KTAKLFSIDKTTGQI 299
>gi|410948513|ref|XP_004001537.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5-like [Felis
catus]
Length = 733
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDP 86
DG LD +Q PE +N+ I + G P V + + ++NDN P+ L
Sbjct: 403 DGTLDREQ---------TPE--YNVTITATDRGKPPLSASKSVTLIITDINDNAPVFLQA 451
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y ++EN I Q++ASD DL P +SY I A + E SY ++ SG
Sbjct: 452 SYMVHVMENNPPGASIAQVSASDPDLGPSGHVSYSIVASDLEPRALASYVSVSAQSG 508
>gi|308481962|ref|XP_003103185.1| CRE-CDH-3 protein [Caenorhabditis remanei]
gi|308260290|gb|EFP04243.1| CRE-CDH-3 protein [Caenorhabditis remanei]
Length = 3351
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V++VNDN P P Y+A+I EN I+++ A+D D + R+ Y + +
Sbjct: 1734 ILIHVEDVNDNAPEFQLPSYFAKIQENLPIGTKILRIQATDRDSEEHARLQYSLDDDDIG 1793
Query: 129 SYFNIDIGSG 138
+ F ID+ +G
Sbjct: 1794 TPFRIDVATG 1803
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 40/168 (23%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISY-------------------------- 39
+++ +I E+ + I+QL+ASD D R
Sbjct: 2142 IFHVEIPEDVAMGEQIIQLSASDSDEKSSHRFELDSGGEQIPFRVEEQTGMVFVNDTLDF 2201
Query: 40 -KISAGNPESYF------NIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
K+S G P + + + I LT G + +++ V++VNDNVP+ P Y+
Sbjct: 2202 EKVSRGWPRNTYIGKLKSSYRIKVRLTDGAWLIETSLFVNVKDVNDNVPVFEKPEYF--F 2259
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
V N++ I Q+ A+D D + + +I Y +++ YF I SG L
Sbjct: 2260 VANETSP-EIGQIHATDLDSNQNGKIRYSVTS----PYFRIHPDSGIL 2302
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF------NIDIGSDLT 59
+Y+ I EN SG I +AA D D RI Y+I +G+P F I+ DL
Sbjct: 2043 LYHFNITEN-SGPTIIGHVAARDAD---SSRIFYEIVSGDPNHEFIISEHGQIESVRDLD 2098
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I+V + +DN P +++ +I E+ + I
Sbjct: 2099 RETNSEYRLILEAFDDGKPRRRGNTTVVIRVLDEDDNAP-RFSRIFHVEIPEDVAMGEQI 2157
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+QL+ASD D R +++ +G + F ++ +G
Sbjct: 2158 IQLSASDSDEKSSHR--FELDSGGEQIPFRVEEQTG 2191
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Q + ++V ++NDN P +Y+ I EN SG I +AA D D RI Y+
Sbjct: 2018 PLQAITKILVKVIDINDNDPRFDLQLYHFNITEN-SGPTIIGHVAARDAD---SSRIFYE 2073
Query: 122 ISAGNPESYFNI 133
I +G+P F I
Sbjct: 2074 IVSGDPNHEFII 2085
>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 3233
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ ++ EN+ I+ ++A D D P+ + YKISAGN + F +
Sbjct: 1330 HQVRVPENEPVNTTILTVSAVDDDNGPNGIVRYKISAGNERNEFFVHSITGAVIILKPLD 1389
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+DL P Q + + V ++NDN P +Y A + EN +
Sbjct: 1390 YDLVQEYQLNITATDLGFEPKQAVATLIVNVSDINDNPPTFNQSIYEAFLPENSPSDSFV 1449
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A D D + YKI G+ + +F+I +G +
Sbjct: 1450 YKVVAQDIDSPKYAVVQYKILGGSGKDHFHIREETGEI 1487
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID------------ 53
Y A + E +V + A D D+ P + + SY I GN F +D
Sbjct: 1647 YDASVSEGAVHGTRVVTVRAVDKDIKPQNNQFSYSIIGGNHGQAFKVDPQTGDIETAKQL 1706
Query: 54 -----------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
IG+ TG P Q V+I + +VNDN P+ P + EN+
Sbjct: 1707 DRETMPAYDLTIGAIDTGSPPQTGTATVHIDLLDVNDNGPVFDPPEVIGYVSENEPAGTI 1766
Query: 102 IVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ L+A+D DL P+ +YK+ G +D SG L
Sbjct: 1767 VMTLSATDPDLPPNGAPFTYKLIGGRQSDVVTLDKHSGML 1806
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + EN S ++Q++A D D + R+ Y I+ G+ F I
Sbjct: 378 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAMGDDNRDFTISEDGGVIRVAKNLN 437
Query: 53 --------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D ++ P V I V ++NDN P+ LD Y ++EN
Sbjct: 438 FERKPCYYLTIRSEDCAAEAGETPRSDTTQVTITVLDINDNAPVFLDSPYLVHVMEN--- 494
Query: 99 ILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
++P ++Q+ A D D P + +++Y + G+ + F I+ +G +
Sbjct: 495 MVPPDGGFVIQVKAYDADTPPYNDQVTYFLKEGDTD-LFRINASTGDI 541
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+ VY V ++NDN P+ + A IVEN + P++ + A D D + RI Y I+ G+
Sbjct: 148 VTVYCNVVDLNDNAPIVETGPHAADIVENATIGTPVLTVTAQDLDSGDNGRILYAITGGD 207
Query: 127 PESYFNI 133
+ F +
Sbjct: 208 EDGNFGV 214
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 29 GDLDPDQRISYKIS--AGNPESYFNID-IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLD 85
GD+ + + YK S + +PE+ +++ I +D P +VY+ V + N+N P
Sbjct: 1160 GDVFSKRTLRYKHSNRSSSPENLYSLTVIATDNGKPPMSSKTVVYVNVVDANNNAPRFEQ 1219
Query: 86 PVYYAQIVENQSGILPIVQL-AASDGDLDPDQRISYKISAGN-PESYFNIDIGSG 138
Y + + EN I QL A D D + +SY +++ N + +F I+ +G
Sbjct: 1220 RSYLSPVPENYGEGKRITQLIAHDDADFGVNAEVSYSLTSMNSTDDFFAIEEQTG 1274
>gi|405971221|gb|EKC36071.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1074
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 38/55 (69%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+Q+ + NDN+P+ ++ +Y +I EN+ + +V+++A+D D+ P+ ++ Y I+ G
Sbjct: 444 VQILDQNDNIPLFVNKIYPCEIYENEPNVTVLVKVSATDNDVGPNAKVRYYINPG 498
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 56 SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
S L GG P L+V I V ++ND P+ +Y I E+ + +VQ+ A+DGD
Sbjct: 209 SALDGGNPPKSGTLMVNISVTDINDKAPIFTQQIYNVTIKEDLAMNSLVVQVTANDGDTG 268
Query: 114 PDQRISYKISAGNPES--YFNIDIGSGSL 140
+ +SYK + ++ FN++ SG +
Sbjct: 269 RNAEVSYKFATIQTDNIDIFNMNSASGEI 297
>gi|148747518|ref|NP_031793.2| protocadherin alpha-6 precursor [Mus musculus]
gi|13876266|gb|AAK26053.1| protocadherin alpha 6 [Mus musculus]
gi|182888085|gb|AAI60380.1| Protocadherin alpha 6 [synthetic construct]
gi|223462405|gb|AAI50817.1| Pcdha6 protein [Mus musculus]
Length = 946
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 37/149 (24%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------------GPDQVYLI- 68
ASD D+ + ++YK+S P YF +D+ S+ G P+ L+
Sbjct: 157 ASDADVGLNSMLTYKLS---PSEYFGLDVKSNSDGNKQIRLLLKKSLDREDAPEHKLLLT 213
Query: 69 --------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ + V +VNDN P P Y +I+EN +++L ASD D
Sbjct: 214 ATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDKDEGT 273
Query: 115 DQRISYKISAGNPESY---FNIDIGSGSL 140
+ ISY + P F+ID +G +
Sbjct: 274 NSAISYSFNRLVPPKTLEQFSIDADTGEI 302
>gi|410906919|ref|XP_003966939.1| PREDICTED: protocadherin-7-like [Takifugu rubripes]
Length = 1254
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 231 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVMITDVNDNSPRFEKSVY 280
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN S PI+QL A+D D+ + +I Y A +D +G L
Sbjct: 281 EADLPENSSPGSPILQLKATDADVGVNGQIEYVFGAATESVRRLLRLDESTGWL 334
>gi|313224590|emb|CBY20381.1| unnamed protein product [Oikopleura dioica]
Length = 974
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+ ID+ + G P + I+V++VNDN P +Y+ I+EN + IV L A+
Sbjct: 411 YRIDLRAADNGSPPLTTTKTISIKVEDVNDNAPFFQRDMYHVNILENNNVGKSIVSLKAT 470
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + I Y + G S+F+++ G+G L
Sbjct: 471 DFDEGQNAEIEYIL--GEESSFFSLERGTGDL 500
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 2055 AFSVLTLTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 2114
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2115 SQPARGLFHVD 2125
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2468 TQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVE 2527
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG L
Sbjct: 2528 ASDADPGPHGLVRFTLSSGDPLGLFELDESSGDL 2561
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 581 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTR 640
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 641 TLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPGT 700
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R+SY I AGN F +D SG L
Sbjct: 701 AVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLL 740
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1598 LDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAH 1657
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1658 LSLEVPEGQDPQT-LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFG 1710
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 490 VVRVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYELEPQPQLIVVAT 549
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 550 DGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 609
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 610 LLSYSLGAGLGTSGSPPFRIDAHSG 634
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD----------------- 63
+ L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1671 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIEAR 1730
Query: 64 -------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
L+V + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1731 DGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGANG 1790
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R++Y + G ++ ++ SG L
Sbjct: 1791 RVTYYLGTGAAGAFL-LEPSSGEL 1813
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + +SY
Sbjct: 2256 GPHEGRANLTVLVEDVNDNAPAFSQTLYQVMLLEHTPPGSAILSVSATDRDSGANGHVSY 2315
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F+ID +G+L
Sbjct: 2316 HLA--SPAEGFSIDPNNGTL 2333
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 201 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 249
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 250 APAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHT 309
Query: 138 GSL 140
G L
Sbjct: 310 GLL 312
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 2152 AFSVLTLTLQDTNDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 2211
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2212 SQPARGLFHVD 2222
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ + ++ +
Sbjct: 2565 TQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRMAVPEDTPIGVELLHVE 2624
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2625 ASDADPGPHGLVRFTLSSGDPSGLFELDESSGAL 2658
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 582 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAQSGDVCTTR 641
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 642 ILDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGT 701
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R+SY I AGN F +D SG L
Sbjct: 702 AVLRVRAHDPDQGPHGRLSYYILAGNNPPLFALDEHSGLL 741
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDP+ + + A + E I++ D P ++ V + V++ ND+ P T V
Sbjct: 1695 LDPETGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAP-TFGSV 1753
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + V + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1754 HLSLEVPEGQDPQTLTVLRASDPDVGANGQLQYRILDGDPSGAFILDLASGEFG 1807
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 491 VVRVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQPQLIVVAT 550
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 551 DGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 610
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 611 LLSYSLGAGLGASGSPPFRIDAQSG 635
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 25/141 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-------------------- 63
L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1771 LRASDPDVGANGQLQYRILDGDPSGAFILDLASGEFGTMRPLDREVEPAFQLQIEARDGG 1830
Query: 64 ----QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
L+V + V + ND+ P P Y ++ E+ ++QL A D D + R++
Sbjct: 1831 QPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVT 1890
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + G F ++ SG L
Sbjct: 1891 YYLGTGA-AGAFLLEPSSGEL 1910
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2353 GPHEGHANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGHISY 2412
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F++D +G+L
Sbjct: 2413 HLA--SPAEGFSVDPNNGTL 2430
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
+I E+Q + + A D DL R+SY+++AG + YF +
Sbjct: 1552 RIPEDQPPGPAALHVVARDPDLGEAARVSYRLAAGG-DGYFRLHSSTGALSVVRSLDREQ 1610
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ SD P ++ + V +VND P Y + EN ++ L
Sbjct: 1611 RAEHVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTL 1670
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D DL + +++Y +G F++D +G L
Sbjct: 1671 RATDPDLGANGQVTYGGISGE---SFSLDPETGVL 1702
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 202 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 250
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 251 APAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHT 310
Query: 138 GSL 140
G L
Sbjct: 311 GLL 313
>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
Length = 3293
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 2148 AFSVLTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 2207
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2208 SQPARGLFHVD 2218
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 578 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTR 637
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 638 TLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNRPQFYPREYAASLSAQSAPGT 697
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R+SY I AGN F +D SG L
Sbjct: 698 AVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLL 737
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2561 TQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVE 2620
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2621 ASDADPGPHGLVRFTLSSGDPLGLFELDESSGAL 2654
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1691 LDPDTGVLTTLQALDREEEEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAH 1750
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1751 LSLEVPEGQDPQI-LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFG 1803
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------------- 53
+ ++ E+Q + + A D DL R+SY+++AG + YF +
Sbjct: 1546 HVRLPEDQPTGPTALHVVARDPDLGEAARVSYRLAAGG-DGYFRLHSSTGALSVVRSLDR 1604
Query: 54 ----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ SD P ++ I V ++ND P Y + EN ++
Sbjct: 1605 EQRAEHVLTVVASDHGSPPRSATQLLTISVADINDEAPAFQQQEYSVLLRENSPPGTSLL 1664
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D DL + +++Y +G F++D +G L
Sbjct: 1665 TLRATDSDLGANGQVTYGGISGE---RFSLDPDTGVL 1698
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD----------------- 63
+ L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1764 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQMKIEAR 1823
Query: 64 -------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
L+V + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1824 DGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANG 1883
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y + AG F ++ SG L
Sbjct: 1884 HVTYYLGAGA-AGAFLLEPSSGEL 1906
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT------------------ 59
++ + ASD D P + + +S+G+P F +D S LT
Sbjct: 2616 LLHVEASDADPGPHGLVRFTLSSGDPLGLFELDESSGALRLTRPLDCETQAQHQLVVQAA 2675
Query: 60 --GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G V I+VQ+VND+ P + + ENQ + L A DGD R
Sbjct: 2676 DPAGAHFALAPVTIEVQDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGR 2735
Query: 118 ISYKISAGNP----ESYFNIDIGSGSL 140
+ Y + P F ++ +G L
Sbjct: 2736 LRYSLLEAGPGPEGREAFALNSSTGEL 2762
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 487 VVRVMAQDPDQGTNGQVTYSLAPGAHNRWFSIDPTSGIITTAASLDYELEPQPQLIVVAT 546
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 547 DGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 606
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 607 LLSYSLGAGLGASGSPPFRIDAHSG 631
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 198 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 246
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 247 APAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHT 306
Query: 138 GSL 140
G L
Sbjct: 307 GLL 309
>gi|195350169|ref|XP_002041614.1| GM16648 [Drosophila sechellia]
gi|194123387|gb|EDW45430.1| GM16648 [Drosophila sechellia]
Length = 384
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 258 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 317
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 318 GLVEYAINRRQSDKEQMFRIDPRTGAI 344
>gi|432843796|ref|XP_004065669.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 1575
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + + NDN P +Y ++ +Q + +VQ+ A+D D D + +I Y I GN E
Sbjct: 441 VTVTLTDENDNSPTFSSSMYEGEVTADQVVDMELVQVEANDPDADINGQIKYSIEFGNSE 500
Query: 129 SYFNIDIGSGSL 140
YF++D +G++
Sbjct: 501 GYFSMDEDTGAI 512
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 29/147 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPDQVYLIVY------- 70
I +AA+D D ++ I Y + G E F+ID S L G D+ Y
Sbjct: 678 ITVVAATDKDSGFNKEIRYSLRGG--EGRFSIDPLSGMVSLIGELDRETKAEYTVLVLAE 735
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+QV +VNDN+P Y +++E ++ ++ L+A D D + +
Sbjct: 736 DQGRPVKSATTALTVQVSDVNDNIPKFSQDAYQVEVLETEAVESTLLTLSAEDPDEELNA 795
Query: 117 RISYKISAGNPES---YFNIDIGSGSL 140
R+SY I +P S F +D SG L
Sbjct: 796 RVSYSIFQQSPVSDPAAFALDASSGVL 822
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+Y ++ +Q + +VQ+ A+D D D + +I Y I GN E YF++D
Sbjct: 459 MYEGEVTADQVVDMELVQVEANDPDADINGQIKYSIEFGNSEGYFSMD 506
>gi|390354040|ref|XP_785422.3| PREDICTED: protocadherin Fat 1-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 2084
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-----FNIDIGSDLTG 60
+Y I EN + I+ ++ASD D+ + I++ + E + ++ G+ T
Sbjct: 593 LYTENIRENLAAGHYILYVSASDADIGSNAEITFSLEGQGSELFTIEKDLGVNTGTVRTS 652
Query: 61 GP-----DQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G Q Y + I + +VNDN P VY + EN +
Sbjct: 653 GALDYETQQFYRFQVIASDGGGLSCSSDISIGLLDVNDNPPAFTQLVYNVSVSENTTVNT 712
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A D D D ++R Y + GN E F++D SG L
Sbjct: 713 LLTRVQAVDPDKDANRRHRYSVRGGNSEGTFSLDDQSGIL 752
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
VY +++E+ V + A DGD+ + + Y I++G+P ++F I+ + + L
Sbjct: 491 VYPGEVLESDPIGTVTVSIQAVDGDVGTNAHVVYYITSGDPFNHFAIESNSGKIYVANPL 550
Query: 59 TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
Y + V I VQ++NDN P+ +Y I EN + I+
Sbjct: 551 DRELKDTYRLNVTATDGLFSDTAQVVISVQDINDNSPVCAQTLYTENIRENLAAGHYILY 610
Query: 105 LAASDGDLDPDQRISYKISAGNPESY 130
++ASD D+ + I++ + E +
Sbjct: 611 VSASDADIGSNAEITFSLEGQGSELF 636
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGP 62
VY + EN + + ++ A D D D ++R Y + GN E F++D S LT
Sbjct: 699 VYNVSVSENTTVNTLLTRVQAVDPDKDANRRHRYSVRGGNSEGTFSLDDQSGILTLTEPL 758
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ Y + V + NDN P +Y A I E+
Sbjct: 759 DRELRSHYNLTLAVTDILQASLSTSSQLIVNVLDENDNEPQFESDLYNASIAEDAEIGST 818
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D+ + I Y+I +GN F ID G +
Sbjct: 819 VVTVIAISQDVGLNAEIMYQIVSGNEHGKFKIDSAIGEI 857
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+ V SG+L I + LD + ++Y I + + D+T
Sbjct: 426 VFEKFEVNEMSGMLTIQE------GLDRETAVTYDI----------LILARDVTNADFSA 469
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
V++ V + ND+ P VY +++E+ V + A DGD+ + + Y I++G
Sbjct: 470 TATVHVTVVDFNDSPPRFTQKVYPGEVLESDPIGTVTVSIQAVDGDVGTNAHVVYYITSG 529
Query: 126 NPESYFNIDIGSGSL 140
+P ++F I+ SG +
Sbjct: 530 DPFNHFAIESNSGKI 544
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IG-------- 55
+Y A I E+ +V + A D+ + I Y+I +GN F ID IG
Sbjct: 804 LYNASIAEDAEIGSTVVTVIAISQDVGLNAEIMYQIVSGNEHGKFKIDSAIGEITVASEL 863
Query: 56 --------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D+ P + I + + NDN P+ + +Y I E
Sbjct: 864 DFEMSNKYYLTVKATDMGTNPLSDTTTINIFITDANDNAPLFSEDIYSTTINEAARVEGD 923
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A+D D + R+SY I GN + F I+ +G
Sbjct: 924 VIQVMATDADSGANGRVSYSIIHGNLFNQFIINPDNG 960
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG----------- 55
Y +EN + + Q+ A+D D + ++Y I + F+ID
Sbjct: 65 YVTDFMENGTAGEVVFQVMATDDDSGDNGVVTYSIISAEARRMFDIDSATGEIHSRMLLD 124
Query: 56 ----SDLT---------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
SD T GG Y V + + + NDNVP Y A +PI
Sbjct: 125 LESVSDRTLPVPIMAVDGGGKTAYTTVNVILNDRNDNVPRFEMREYKAFTRSGGESHVPI 184
Query: 103 VQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
+ + A+D D + ++Y +G +S F ID +GS+
Sbjct: 185 LVVTATDVDSGSNALLTYSFESGTAQSALDLFEIDPKTGSI 225
>gi|3253071|dbj|BAA29046.1| CNR2 [Mus musculus]
Length = 946
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 37/149 (24%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------------GPDQVYLI- 68
ASD D+ + ++YK+S P YF +D+ S+ G P+ L+
Sbjct: 157 ASDADVGLNSMLTYKLS---PSEYFGLDVKSNSDGNKQIRLLLKKSLDREDAPEHKLLLT 213
Query: 69 --------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ + V +VNDN P P Y +I+EN +++L ASD D
Sbjct: 214 ATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDKDEGT 273
Query: 115 DQRISYKISAGNPESY---FNIDIGSGSL 140
+ ISY + P F+ID +G +
Sbjct: 274 NSAISYSFNRLVPPKTLEQFSIDADTGEI 302
>gi|34447124|dbj|BAC84976.1| cadherin-related neuronal receptor [Mus musculus]
Length = 946
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 37/149 (24%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG----------------GPDQVYLI- 68
ASD D+ + ++YK+S P YF +D+ S+ G P+ L+
Sbjct: 157 ASDADVGLNSMLTYKLS---PSEYFGLDVKSNSDGNKQIRLLLKKSLDREDAPEHKLLLT 213
Query: 69 --------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
+ + V +VNDN P P Y +I+EN +++L ASD D
Sbjct: 214 ATDGGKPELTGSVQLLVTVLDVNDNAPTFQHPEYEVRILENSDNGTTVIRLNASDKDEGT 273
Query: 115 DQRISYKISAGNPESY---FNIDIGSGSL 140
+ ISY + P F+ID +G +
Sbjct: 274 NSAISYSFNRLVPPKTLEQFSIDADTGEI 302
>gi|241121657|ref|XP_002403288.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493397|gb|EEC03038.1| protocadherin fat, putative [Ixodes scapularis]
Length = 2933
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLTGGPDQ-VYLI----- 68
++++AASD D R++Y I GN F ID S+L P Q YL+
Sbjct: 1126 VMRVAASDPDSSDRDRLAYSIVGGNEAQAFAIDRKTGIVTLSNLHQFPQQPTYLLNVSVT 1185
Query: 69 --VYIQVQNV-------NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
VY+ V N + P VY A + EN+ P+ + A+D D ++
Sbjct: 1186 DGVYLSHAKVKVVVLPSNRHSPAFTHTVYEAALPENRDAGFPVATVTATDKDRGHFGHVT 1245
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y I + + ++F ID +G +
Sbjct: 1246 YAIRSDDCATHFRIDNATGEI 1266
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAG---------- 44
Y A + E+ + ++ A+D DL ++R+SY ++G
Sbjct: 1852 YTATVAEDVDVGTLVAKVHATDRDLGFNRRVSYSFVDSARGHFSIDETSGIVMLNRPLDR 1911
Query: 45 NPESYFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ FN+ + + G P L + + VQ+VNDN P Y+A + E + + ++
Sbjct: 1912 EERATFNLTVQASDHGTPQLSSLATLLVVVQDVNDNPPEFSRKFYHAVVSEASAVGVEVL 1971
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A+ D + ++Y SAGN +F+ID +GS+
Sbjct: 1972 KVLATSRDSGLNAEVTYFFSAGNELGHFSIDAKTGSV 2008
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG---------- 55
VY A + EN+ P+ + A+D D ++Y I + + ++F ID
Sbjct: 1213 VYEAALPENRDAGFPVATVTATDKDRGHFGHVTYAIRSDDCATHFRIDNATGEIFTTKPL 1272
Query: 56 ------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
S GG + +V + V +VNDN P Y I N + I+
Sbjct: 1273 DRESRHLYLIPVSATDGGGRLAFTMVRVTVTDVNDNEPQFAVSEYRVNIQVNTTVGTTIL 1332
Query: 104 QLAASDGDLDPDQRISYKI----SAGNPESYFNIDIGSGSL 140
++ A D D + Y I S N S FN+ SG +
Sbjct: 1333 KVRAFDKDKGMAATLQYSIHDSGSLSNITSLFNVTHDSGEV 1373
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDG 110
++ S+ G + + ++ + V +VNDN P+ ++ YY+ + VE ++G L + ++ A+D
Sbjct: 769 VEARSEADGPHNAAHTVLDVGVLDVNDNAPIFVNLPYYSVVPVEAKAGDL-VRKVEANDL 827
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSL 140
DL + R+ Y++ GN E F+++ SG +
Sbjct: 828 DLGENGRVRYQLREGNSE-LFHVNAVSGEI 856
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 26/163 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
M P Y + E I+++ ASD D + R+ Y + A + S F+ID
Sbjct: 1001 MFSQPSYNTSVSEATPYTTSILKVHASDRDTGANARVQYSLEA-SALSTFHIDPVEGVID 1059
Query: 54 ----------------IGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+ + G P + V++ V ++NDN P Y + E
Sbjct: 1060 LRVPLDHEAQPLYHLVVTATDAGSPSALSSTAHVWVTVLDMNDNPPAFPQLSYSCAVSEL 1119
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++AASD D R++Y I GN F ID +G
Sbjct: 1120 APRGQFVMRVAASDPDSSDRDRLAYSIVGGNEAQAFAIDRKTG 1162
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
P Y VE ++G L + ++ A+D DL + R+ Y++ GN E + + ++T
Sbjct: 804 PYYSVVPVEAKAGDL-VRKVEANDLDLGENGRVRYQLREGNSELFHVNAVSGEITLRQPL 862
Query: 60 GGPDQVYLIVYIQVQN---------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
G + Y +V V N VN +P+ Y + EN +P++
Sbjct: 863 GTHNTEYTLVVAAVDNGIPSLETEAVVPIKVVNRAMPVFPRQFYSVSVPENLPPDVPVIT 922
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D +++ Y I +GN F +D +G
Sbjct: 923 VQA---DSPKGRQLIYSIVSGNTNEEFAVDFNAG 953
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 27/151 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y + EN +P++ + A D +++ Y I +GN F +D + + +Q+
Sbjct: 906 YSVSVPENLPPDVPVITVQA---DSPKGRQLIYSIVSGNTNEEFAVDFNAGVVYVVEQLD 962
Query: 67 -----------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
++V I V++VND PM P Y + E I+
Sbjct: 963 YETHQKYQLTLRATDSVTGAFSDVLVGITVEDVNDFPPMFSQPSYNTSVSEATPYTTSIL 1022
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ ASD D + R+ Y + A + S F+ID
Sbjct: 1023 KVHASDRDTGANARVQYSLEA-SALSTFHID 1052
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 29/153 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES--YFNID---------IG 55
Y A + EN + +L A D D Q+I+Y+ GN + F +D +
Sbjct: 1540 YRASVAENAEEGCAVAKLTAHDAD--RLQKITYEFYEGNDPAADIFRVDAITGTVTTLVA 1597
Query: 56 SDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D P + + V+++V +VNDN P P Y A I+E+
Sbjct: 1598 LDREAVPSYNFTVSARDDGLPPRSATTWVFVEVVDVNDNAPAFARPRYDAAILEDAVPGT 1657
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
IV L SD D + + +G+PE F +
Sbjct: 1658 VIVTLETSDPD-GVGAGLDLYVVSGDPEERFGV 1689
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 27/143 (18%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------------IGSD 57
++ V+ SDGDL + Y I GN E F ID + +
Sbjct: 160 VVATVRAGDSDGDL-----VWYNIVDGNQEGKFMIDKIGVIKLASPLDWETTQNYNLSVE 214
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+T G D+V V + + + ND P + +I EN ++QL+ +D D +R
Sbjct: 215 VTDGVDKVTTQVLVSIVDANDQWPEFTKSTFRVEISENIPPGTDVLQLSTTDS--DGGRR 272
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y + F +D +G L
Sbjct: 273 LFYSLYNRQSVKKFQVDSLTGVL 295
>gi|149726793|ref|XP_001502186.1| PREDICTED: protocadherin gamma-B3-like [Equus caballus]
Length = 820
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P V + + +VNDN P+
Sbjct: 406 TDGALDREQTPEYNVTI----------TATDRGKPPLSSNRSVILNIADVNDNAPVFQQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q+ ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 456 SYVVHVAENNPPGASIAQVRASDPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 512
>gi|326914508|ref|XP_003203567.1| PREDICTED: protocadherin Fat 3-like [Meleagris gallopavo]
Length = 3426
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-------- 58
Y A + EN + + ++ A+D D+ +++++Y + A + + YF++D S +
Sbjct: 2006 YTACVYENTATKALLTRVQATDPDVGVNRKVTYSL-ADSADGYFSVDRSSGIIILEHPLD 2064
Query: 59 ----------TGGPDQV-------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
DQ + V I V ++NDN P+ Y + E+ S
Sbjct: 2065 RELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPEDTSPGTE 2124
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + A+ D+ + I+Y I +GN + FNI+ +G++
Sbjct: 2125 VLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAI 2163
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y + E+ S ++ + A+ D+ + I+Y I +GN + FNI+ + D
Sbjct: 2111 YLVTVPEDTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISISESLD 2170
Query: 58 LTGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D YL+V + V +VNDN P VY A I E+ +
Sbjct: 2171 YESCKD-FYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISEDAAIGDS 2229
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ L A D D + +I + I +G+ ++ F++D GSG
Sbjct: 2230 VIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSG 2266
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A + E+ PI+ + A+ + Q I Y I G+P + FNID
Sbjct: 1059 PFYTASVNEDVEIHTPILSINATSPE---GQGIIYIIVEGDPYNQFNIDFDTGVLSVISP 1115
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + + +VNDN P+ Y A + E
Sbjct: 1116 LDYEINSLFKLMVRASDALTGARAEV--TVDLVINDVNDNPPVFDQSAYNATLSEASLIG 1173
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++Q+ A+D D D ++ + Y+I N YF+ID SG
Sbjct: 1174 TPVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSTSG 1214
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGG---------------- 61
P++Q+ A+D D D ++ + Y+I N YF+ID S L
Sbjct: 1175 PVLQVVATDADSDNNKIVQYQIVQDTFNSTDYFHIDSTSGLILTARMLDHELIQQCSLKV 1234
Query: 62 --------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P ++V I + ++NDN P+ +Y + + E + + ASD D
Sbjct: 1235 RATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIYESYVSELAPRGHFVTCVQASDADSS 1294
Query: 114 PDQRISYKISAGNPESYFNIDIGSG 138
R+ Y I +GN + F +D SG
Sbjct: 1295 DFDRLEYSILSGNDRTSFIMDSKSG 1319
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY A I E+ + ++ L A D D + +I + I +G+ ++ F++D GS L ++
Sbjct: 2215 VYSAVISEDAAIGDSVIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSGLVKVKKKL 2274
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V + + +VNDN P+ Y A I EN+
Sbjct: 2275 DRERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANYTAVIQENKPVGTS 2334
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D ++ I GN E F +D
Sbjct: 2335 ILQLVVTDKDSFHNGPPFTFTILTGNEEEEFTLD 2368
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V++ ND+ P P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 422 VIINVEDSNDHSPYFTSPLYEASVYESAAVGSAVLQVTALDKDKGENAELVYTIEAGNTG 481
Query: 129 SYFNID 134
+ F I+
Sbjct: 482 NTFKIE 487
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------SAG--------N 45
VY A++ EN + ++ + A+DGD +ISY I S G +
Sbjct: 1370 VYVAEVRENAAPGTKVLHVKATDGDSGVYGQISYSIINDFAKDRFLIDSNGQILTTERLD 1429
Query: 46 PESYFNIDIG---SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
E++ DIG L GG + V + V + NDN P + Y A + + +
Sbjct: 1430 RENFLESDIGIFLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVKADVGKGYLV 1489
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 1490 TQVQAVDPDDGANSRITYSL 1509
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ +++VNDN P+ Y A + EN + + ++ A+D D+ +++++Y + A + +
Sbjct: 1987 IHLILEDVNDNPPVFSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSL-ADSAD 2045
Query: 129 SYFNIDIGSG 138
YF++D SG
Sbjct: 2046 GYFSVDRSSG 2055
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
L+ + A +++ SG + ++ D D + D ++ + A D+G L+
Sbjct: 1729 LEKITEAFTIDSNSGWISTLK----DLDHEKDPTFTFAVVAS--------DLGETLSLSS 1776
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYK 121
+V + V ++NDN P+ VY + E+ + L+ D D D ++++SY
Sbjct: 1777 TT---LVSVAVTDINDNAPVFEHEVYRGSVKESDPPGEVVAVLSTWDEDTSDVNRQVSYH 1833
Query: 122 ISAGNPESYFNI 133
I+ GNP+ F +
Sbjct: 1834 ITGGNPKGKFAL 1845
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG--------- 55
P Y A V+ + G L I ++ A D D D + +SY + +F ID G
Sbjct: 958 PYYAAVQVDAEPGTL-IYRVTAIDKDKDENGDVSYLLKED--YGHFEIDRGTGSVTLKEA 1014
Query: 56 --SDLT------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SDL+ GG + V + + VN +P+ P Y A + E+ P
Sbjct: 1015 FNSDLSNIEYLVVILAKDGGSPSLSASVELPITIVNKAMPVFDKPFYTASVNEDVEIHTP 1074
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ + A+ + Q I Y I G+P + FNID +G L
Sbjct: 1075 ILSINATSPE---GQGIIYIIVEGDPYNQFNIDFDTGVL 1110
>gi|291387506|ref|XP_002710179.1| PREDICTED: protocadherin gamma subfamily B, 3 [Oryctolagus
cuniculus]
Length = 833
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P I V + + +VNDN P+
Sbjct: 406 TDGALDREQ---------TPE--YNVTIAATDRGQPPLSSSISVTVHISDVNDNAPVFHQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ ++SY I A + E SY ++ +G
Sbjct: 455 AAYVVHVPENNPPGASIAQVSASDPDLGPNGQVSYSIVASDLEPRALSSYVSVSAHNG 512
>gi|345793787|ref|XP_849474.2| PREDICTED: protocadherin gamma-B5 [Canis lupus familiaris]
Length = 807
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDP 86
DG LD +Q PE +N+ I + G P I + + + +VNDN P+
Sbjct: 403 DGTLDREQ---------TPE--YNVTITATDRGKPPLSSSISITLHIADVNDNAPVFQQA 451
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 452 SYEVHEAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 508
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus
floridanus]
Length = 3165
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 30/152 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A I E+ P+ + A+D D D RI Y+I+ GN F+I
Sbjct: 706 YEAVISEDDPPGTPVASVTATDPD--EDARIHYEITGGNTRGRFSIASQNGRGLITVAQP 763
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
SD G D +VY+ V + N+ P+ + Y + E+ +
Sbjct: 764 LDYKQEKRFVLTVTASDSGGRTDTA--LVYVNVSDANNFSPVFENAPYSVSVFEDAPVGV 821
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
++ ++A+D D+ + +I+Y ++ N E N
Sbjct: 822 TVLVVSATDSDVGKNAQITYSLATDNGEQTIN 853
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y + E+ + ++ ++A+D D+ + +I+Y ++ N E N + TG
Sbjct: 809 YSVSVFEDAPVGVTVLVVSATDSDVGKNAQITYSLATDNGEQTINEFTINPQTGAITTTK 868
Query: 66 ---------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
YL+ V I V +VNDN P+ P Y I E+
Sbjct: 869 ALDRELIPSYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYLGSIPEDVLVG 928
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V++AA+D D D + R+ Y + + + F ID +G
Sbjct: 929 TSVVRIAATDADTDLNGRVRYALE-DDGDGAFAIDSMTG 966
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
Y I I D P V + V +VNDN P Y A I E+ P+ + A+
Sbjct: 667 YQFIVIAMDSGEEPKSASATVILTVTDVNDNDPYFEPKNYEAVISEDDPPGTPVASVTAT 726
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D D RI Y+I+ GN F+I +G
Sbjct: 727 DP--DEDARIHYEITGGNTRGRFSIASQNG 754
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGIL-PIV-QLAASDGDLDPDQRISYKISAGNPE 128
++V + NDN P + Y A + E+ P+V ++ A+D D + + Y I GN +
Sbjct: 471 VRVLDDNDNYPQFTERTYSASVSEDLDYTSNPVVARIRATDADAGANAAVRYAIIGGNTQ 530
Query: 129 SYFNIDIGSGSLG 141
+ F+ID SG +
Sbjct: 531 NTFSIDSMSGDVA 543
>gi|390354038|ref|XP_003728246.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 2093
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-----FNIDIGSDLTG 60
+Y I EN + I+ ++ASD D+ + I++ + E + ++ G+ T
Sbjct: 593 LYTENIRENLAAGHYILYVSASDADIGSNAEITFSLEGQGSELFTIEKDLGVNTGTVRTS 652
Query: 61 GP-----DQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G Q Y + I + +VNDN P VY + EN +
Sbjct: 653 GALDYETQQFYRFQVIASDGGGLSCSSDISIGLLDVNDNPPAFTQLVYNVSVSENTTVNT 712
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A D D D ++R Y + GN E F++D SG L
Sbjct: 713 LLTRVQAVDPDKDANRRHRYSVRGGNSEGTFSLDDQSGIL 752
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
VY +++E+ V + A DGD+ + + Y I++G+P ++F I+ + + L
Sbjct: 491 VYPGEVLESDPIGTVTVSIQAVDGDVGTNAHVVYYITSGDPFNHFAIESNSGKIYVANPL 550
Query: 59 TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
Y + V I VQ++NDN P+ +Y I EN + I+
Sbjct: 551 DRELKDTYRLNVTATDGLFSDTAQVVISVQDINDNSPVCAQTLYTENIRENLAAGHYILY 610
Query: 105 LAASDGDLDPDQRISYKISAGNPESY 130
++ASD D+ + I++ + E +
Sbjct: 611 VSASDADIGSNAEITFSLEGQGSELF 636
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGP 62
VY + EN + + ++ A D D D ++R Y + GN E F++D S LT
Sbjct: 699 VYNVSVSENTTVNTLLTRVQAVDPDKDANRRHRYSVRGGNSEGTFSLDDQSGILTLTEPL 758
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D+ Y + V + NDN P +Y A I E+
Sbjct: 759 DRELRSHYNLTLAVTDILQASLSTSSQLIVNVLDENDNEPQFESDLYNASIAEDAEIGST 818
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V + A D+ + I Y+I +GN F ID G +
Sbjct: 819 VVTVIAISQDVGLNAEIMYQIVSGNEHGKFKIDSAIGEI 857
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+ V SG+L I + LD + ++Y I + + D+T
Sbjct: 426 VFEKFEVNEMSGMLTIQE------GLDRETAVTYDI----------LILARDVTNADFSA 469
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
V++ V + ND+ P VY +++E+ V + A DGD+ + + Y I++G
Sbjct: 470 TATVHVTVVDFNDSPPRFTQKVYPGEVLESDPIGTVTVSIQAVDGDVGTNAHVVYYITSG 529
Query: 126 NPESYFNIDIGSGSL 140
+P ++F I+ SG +
Sbjct: 530 DPFNHFAIESNSGKI 544
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IG-------- 55
+Y A I E+ +V + A D+ + I Y+I +GN F ID IG
Sbjct: 804 LYNASIAEDAEIGSTVVTVIAISQDVGLNAEIMYQIVSGNEHGKFKIDSAIGEITVASEL 863
Query: 56 --------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D+ P + I + + NDN P+ + +Y I E
Sbjct: 864 DFEMSNKYYLTVKATDMGTNPLSDTTTINIFITDANDNAPLFSEDIYSTTINEAARVEGD 923
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++Q+ A+D D + R+SY I GN + F I+ +G
Sbjct: 924 VIQVMATDADSGANGRVSYSIIHGNLFNQFIINPDNG 960
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 27/161 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG----------- 55
Y +EN + + Q+ A+D D + ++Y I + F+ID
Sbjct: 65 YVTDFMENGTAGEVVFQVMATDDDSGDNGVVTYSIISAEARRMFDIDSATGEIHSRMLLD 124
Query: 56 ----SDLT---------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
SD T GG Y V + + + NDNVP Y A +PI
Sbjct: 125 LESVSDRTLPVPIMAVDGGGKTAYTTVNVILNDRNDNVPRFEMREYKAFTRSGGESHVPI 184
Query: 103 VQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSGSL 140
+ + A+D D + ++Y +G +S F ID +GS+
Sbjct: 185 LVVTATDVDSGSNALLTYSFESGTAQSALDLFEIDPKTGSI 225
>gi|358413166|ref|XP_003582483.1| PREDICTED: protocadherin gamma-B6-like [Bos taurus]
Length = 814
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DGDLD +Q + Y ++ +D P + + + ++NDN P+
Sbjct: 406 TDGDLDREQTLEYNVTI----------TATDRGKPPLSSSTTITLCITDINDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY +++ SG
Sbjct: 456 SYIVHVGENNPPGASIAQVSASDPDLGPNGYVSYSIVASDLEPRALSSYVSVNPQSG 512
>gi|441596423|ref|XP_004092928.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Nomascus
leucogenys]
Length = 804
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+D GS G QVY I+V +VNDN P P Y QI E+ +V+++A+D D
Sbjct: 216 LDGGSPPRSGTAQVY----IEVVDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVD 271
Query: 112 LDPDQRISYKISAGNPE--SYFNIDIGSGSL 140
+ ISY + + E FN+D +G +
Sbjct: 272 TGVNGEISYSLFQASDEISKTFNVDFLTGEI 302
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 206 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 265
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 266 GLVEYAINRRQSDKEQMFRIDPRTGAI 292
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 620 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 667
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 668 KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 724
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 50 FNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
FN+ IG+ G P+ + L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1631 FNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTA 1690
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I AG F++D G
Sbjct: 1691 KSLHGAENANLSYEIPAGVANDLFHVDWQRG 1721
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
+Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 679 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 738
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 739 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 797
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNI 831
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-Q 64
V Y+ + E+ G+ I A G L Q + Y+ S + + I +D G P
Sbjct: 913 VTYSLVKESGKGLFAI---DARSGHLILSQHLDYESS----QRHTLIVTATD-GGVPSLS 964
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 965 TNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1022
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P+ + Y I++G
Sbjct: 2685 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSG 2744
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2745 NDEHMFTIDLVTGVL 2759
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1813 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASD 1872
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ +VQ++A D DL +
Sbjct: 1873 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNA 1932
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1933 RLVYSL-ANETQWQFAIDGQSG 1953
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 857
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D +++Y +
Sbjct: 858 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL 917
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 918 VKESGKGLFAIDARSGHL 935
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1780 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1839
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1840 NKFSIDSSSGEL 1851
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 206 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 265
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 266 GLVEYAINRRQSDKEQMFRIDPRTGAI 292
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 620 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 667
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 668 KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 724
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 12 VENQSGILPIVQ-LAASDGDLDPDQRISYKISA---GNPESYFNIDIGSDLTGGPDQVYL 67
+ +Q+GI+ +V+ L + D++ R + ISA G PE P + L
Sbjct: 1605 INSQTGIIELVKSLPPATEDVEKGGRFNLIISAKDHGQPE--------------PKKSSL 1650
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+++ VQ ++N P L VY A I+EN ++Q+ A + +SY+I AG
Sbjct: 1651 NLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKPLHGAENANLSYEIPAGVA 1710
Query: 128 ESYFNIDIGSG 138
F++D G
Sbjct: 1711 NDLFHVDWQRG 1721
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
+Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 679 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 738
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 739 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 797
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNI 831
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-Q 64
V Y+ + E+ G+ I A G L Q + Y+ S + + I +D G P
Sbjct: 913 VTYSLVKESGKGLFAI---DARSGHLILSQHLDYESS----QRHTLIVTATD-GGVPSLS 964
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 965 TNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1022
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P+ + Y I++G
Sbjct: 2685 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSG 2744
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2745 NDEHMFTIDLVTGVL 2759
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1813 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASD 1872
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ +VQ++A D DL +
Sbjct: 1873 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNA 1932
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1933 RLVYSL-ANETQWQFAIDGQSG 1953
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 857
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D +++Y +
Sbjct: 858 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL 917
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 918 VKESGKGLFAIDARSGHL 935
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 69 VYIQVQNVNDNVP-MTLDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+YI V +VNDN P Y I EN + G++ V ASD D P+ + Y I+ GN
Sbjct: 1780 IYITVGDVNDNSPEFRPGSCYGLSIPENSEPGVIHTV--VASDLDEGPNADLIYSITGGN 1837
Query: 127 PESYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1838 LGNKFSIDSSSGEL 1851
>gi|399152177|emb|CCI61371.1| flamingo membrane protein, partial [Platynereis dumerilii]
Length = 633
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 31/151 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKIS--AGNPESYFNID--IGSDLT----------------- 59
I+ + ASDGD P+ I Y I +G+ E F ID GS +T
Sbjct: 390 ILTVRASDGDTGPNADIEYSIVNPSGDNE-VFRIDSRTGSIMTRATLDREKTQFYTLEIQ 448
Query: 60 ---GGP----DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ--SGILPIVQLAASDG 110
GP + IV I V + NDN P Y + E+ SG + + A+DG
Sbjct: 449 AADKGPVTNRQKANAIVEITVTDENDNYPQFEKSSYTVDVSEDLDPSGRPLVAVIKATDG 508
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
D + I Y I+ GN ++ FNID SG L
Sbjct: 509 DAGDNSAIRYSITGGNSQNAFNIDTISGQLS 539
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 24/131 (18%)
Query: 16 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------DLTGG--- 61
SG + + A+DGD + I Y I+ GN ++ FNID S +LT
Sbjct: 495 SGRPLVAVIKATDGDAGDNSAIRYSITGGNSQNAFNIDTISGQLSLLIPLDYELTSSYRL 554
Query: 62 ----------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
P V ++V +VNDN P L ++ ++EN ++++ A D D
Sbjct: 555 RIRAQDSGSPPKSNSTTVLVRVIDVNDNEPRFLTHIFQEAVLENVPTGFTVMRVQAYDAD 614
Query: 112 LDPDQRISYKI 122
+ + Y I
Sbjct: 615 SGSNAALLYSI 625
>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
Length = 2413
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------D 57
Y+A ++EN S ++++ A+ D + I+Y I GN F + + D
Sbjct: 990 YFASVLENSSIGTEVLRVLATSKDTGINAEITYSIIGGNEHRKFAMHNKTGVLYLADVVD 1049
Query: 58 LTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
D I V I V + NDN P Y A I E+ +
Sbjct: 1050 YERAKDYFLTIQAVDGGTPPLSNLATVNISVADCNDNPPQFTANSYTATIREDAQKGDKM 1109
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D + R+SY+I G+ F+I+ +G
Sbjct: 1110 LQIRANDMDSGENSRVSYRIERGDRMGQFDIEEDTG 1145
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 27/157 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A + E+ ++Q+ +D D+D I Y I +G+P S F I
Sbjct: 681 YKASVSEDALPGTVVLQIETTDKDVDLKTNIEYYIISGDPLSQFQIKNSGEVFVVKTLDR 740
Query: 53 ------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IV 103
++G +T G + + V + NDN P L Y Q+ E G+ P ++
Sbjct: 741 ESISQYELGVIVTDGKFTSTANISVTVLDANDNPPYCLKYRYREQLSE---GVHPGTYVL 797
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D + R+ + ++ GN FN+D SG L
Sbjct: 798 QIQANDIDEPANSRLRFYLT-GNGAEDFNLDKDSGQL 833
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y ++ P ++ +N+ + +
Sbjct: 900 VTKIHATDADIGINRKIKYSFIDSYRDHFKIAPDSGIVTLAKPLDREVKAVYNLTVRATD 959
Query: 59 TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + +L+V VQ++NDN P Y+A ++EN S ++++ A+ D +
Sbjct: 960 QGKPSLSNSAFLVV--NVQDINDNPPEFTSKHYFASVLENSSIGTEVLRVLATSKDTGIN 1017
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
I+Y I GN F + +G L
Sbjct: 1018 AEITYSIIGGNEHRKFAMHNKTGVL 1042
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + + ++ASD D R++Y I+ GN
Sbjct: 142 VWVSVMDMNDNPPKFEQPSYTCVLSEHATRGQFVTVVSASDPDYIDHDRLTYTIAQGNEL 201
Query: 129 SYFNIDIGSG 138
++I+ SG
Sbjct: 202 QTYDINPVSG 211
>gi|403271355|ref|XP_003927592.1| PREDICTED: protocadherin-7 [Saimiri boliviensis boliviensis]
Length = 1196
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 205 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 254
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 255 EADLAENSAPGTPILQLRAADSDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 308
>gi|359067608|ref|XP_003586363.1| PREDICTED: protocadherin gamma-B6-like [Bos taurus]
Length = 814
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DGDLD +Q + Y ++ +D P + + + ++NDN P+
Sbjct: 406 TDGDLDREQTLEYNVTI----------TATDRGKPPLSSSTTITLCITDINDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY +++ SG
Sbjct: 456 SYIVHVGENNPPGASIAQVSASDPDLGPNGYVSYSIVASDLEPRALSSYVSVNPQSG 512
>gi|334311095|ref|XP_001377932.2| PREDICTED: protocadherin gamma-B5-like [Monodelphis domestica]
Length = 811
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P + + + +VNDN P+ L P
Sbjct: 407 TDGPLDREQIPEYNITV----------TATDKGNPPLSTSKTLTLNIADVNDNHPVFLQP 456
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
Y + EN I +++ASD DL+ + R+SY I
Sbjct: 457 SYVVYVPENNPSAASIARVSASDSDLEGNGRVSYSI 492
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 259 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 318
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 319 GLVEYAINRRQSDKEQMFRIDPRTGAI 345
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 673 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 720
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 721 KVSLRESPKAPSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------TGG---- 61
+ + A D D + R++Y+I+ GN E F I+ + + GG
Sbjct: 1644 VAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNL 1703
Query: 62 -----------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P + L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1704 IITAKDHGQPEPKKSSLSLHLVVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1763
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I G F++D G
Sbjct: 1764 HGAENANLSYEIPGGVANDLFHVDWQRG 1791
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1020 LTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1075
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
+Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 732 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 791
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 792 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 850
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD + Y I +G+P+ YF+I+ SG++
Sbjct: 851 AASGDAAHRSPVRYSIYSGDPDGYFSIETNSGNI 884
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1883 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSRSGELSARPLDREQNSRYTLQIQASD 1942
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ +VQ++A D DL +
Sbjct: 1943 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNA 2002
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 2003 RLVYSL-ANETQWQFAIDSQSG 2023
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P + Y I++G
Sbjct: 2755 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPSSEVVYDITSG 2814
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2815 NDEHMFTIDLVTGVL 2829
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD + Y I +G+P+ YF+I+ S T G
Sbjct: 851 AASGDAAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 910
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D +++Y +
Sbjct: 911 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL 970
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 971 VKDSGKGLFAIDARSGHL 988
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1850 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1909
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1910 NKFSIDSRSGEL 1921
>gi|195125764|ref|XP_002007346.1| GI12892 [Drosophila mojavensis]
gi|193918955|gb|EDW17822.1| GI12892 [Drosophila mojavensis]
Length = 1727
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 37/171 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLD---PDQRISY-KI---SAGNPESYFNID------ 53
Y+A I+EN+ P++Q+ A D D D+R+ Y KI G F I+
Sbjct: 1065 YHATIIENKGHPEPVLQVRAQDKDAALNARDERLGYHKIIYSLQGEHAMLFEINNLTGQI 1124
Query: 54 --------------------IGSDLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
D G P Q + + I V +VNDN P VY A
Sbjct: 1125 IVARNQTIDRERTPSIRLQVKAEDSPGKPTDAKQSVVELLIDVLDVNDNAPEFTKKVYSA 1184
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
I EN + ++QL A+D D P + Y+ ++ G+ F+++ SG L
Sbjct: 1185 VIPENALKMETVLQLEATDADEGPGGEVRYELVNEGDANGLFSVNAQSGLL 1235
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78
L ++ G++ +R+ Y+ A + + F + + ++ V I V+NVND
Sbjct: 996 LEYFHISERTGEVILKKRLDYEALAESGSADFELQVRANSADRQRSTISRVNITVENVND 1055
Query: 79 NVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISY 120
N P+ Y+A I+EN+ P++Q+ A D D D+R+ Y
Sbjct: 1056 NSPIFDQSSYHATIIENKGHPEPVLQVRAQDKDAALNARDERLGY 1100
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 38/171 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGS-------D 57
VY A I EN + ++QL A+D D P + Y+ ++ G+ F+++ S +
Sbjct: 1181 VYSAVIPENALKMETVLQLEATDADEGPGGEVRYELVNEGDANGLFSVNAQSGLLTTRRN 1240
Query: 58 LTG-GPDQVYLIV------------------------YIQVQNVNDNVPMTLDPVY--YA 90
LTG G + Y+++ +I + ND VP + P A
Sbjct: 1241 LTGKGRAEAYVLIVRAQDNGSQVPKQSSLSTDAEVRIFIGDVSANDGVPFFVAPRVGQMA 1300
Query: 91 QIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESY-FNIDIGSG 138
+ EN + P+ Q+ ASD D D P I+Y+I P++ F ID +G
Sbjct: 1301 NVTENAAVGAPVFQVIASDPDDDSTPSGTITYRILPDTPDAESFAIDTHTG 1351
>gi|443690182|gb|ELT92388.1| hypothetical protein CAPTEDRAFT_192718, partial [Capitella teleta]
Length = 2159
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A I EN + + A+D D PD + Y I+ GN + F++D
Sbjct: 1898 YQATIEENSLAGTEVFAVTATDEDSGPDGEVLYSITTGNEDQVFSVDPVTGQVVVIGLLD 1957
Query: 54 ---IGS--------DLTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
IGS D P Q+ ++ I + +VND P +P + ++EN +
Sbjct: 1958 REQIGSYALTLAAIDKGQNPGQLSSTTLIDITILDVNDCAPFCANPQQIS-VLENTNPGT 2016
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ Q++ D D + + + I AGN + F+ID SG
Sbjct: 2017 EVYQVSCIDNDDGDNGLVQFDIMAGNDGATFSIDAHSG 2054
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
+DPD I Y I+ + ES ++ + T + + V+ VN+ PM P Y
Sbjct: 842 VDPDNGIVYAITQLDYESTTRYEVIVEATDSVAIFSATILVFVEPVNEGTPMFSGP-YSV 900
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQ---RISYKISAGNPESYFNIDIGSGSL 140
I EN + Q+ ASD D DPD ++ Y I +GNP + F ID +G++
Sbjct: 901 SIPENTPLETFLAQITASDID-DPDHPHGQLFYSIISGNPGAIFQIDQDTGNI 952
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 39/171 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------- 46
+Y A + EN I L +D D+D +SY +++G+
Sbjct: 129 IYVASVAENSLAATSIASLTCTDADMD---SLSYMLTSGDDAIPKFVIPSASVGHVETSV 185
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN-------VPMTLDPVYYAQIVE 94
E+ + + ++ G + +Y+ V +VN++ P + P I E
Sbjct: 186 VPLDYETKKSYHLEVSVSDGEHTIVADIYVHVDSVNEHDPSWSAWTPAYIGPTAAYTIQE 245
Query: 95 NQSGILPIVQLAASDGD--LDPDQRISYKISAGNPE---SYFNIDIGSGSL 140
+ S +V +AA+D D D +SY I A NP S F +D SG +
Sbjct: 246 DASIGSTLVTIAATDEDSPASGDGIVSYSIIAANPVSGLSTFQVDAASGKV 296
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSDLTGGPDQVYLIVY 70
V++ GI+ + A D +++P + I +S G+P P
Sbjct: 1836 VDSALGIIEVANSADLDFEVEPTREIHVVVSDNGSP---------------PLSSTATFI 1880
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + N++ P+ Y A I EN + + A+D D PD + Y I+ GN +
Sbjct: 1881 VTLTGFNEHQPLFSATSYQATIEENSLAGTEVFAVTATDEDSGPDGEVLYSITTGNEDQV 1940
Query: 131 FNIDIGSG 138
F++D +G
Sbjct: 1941 FSVDPVTG 1948
>gi|291387481|ref|XP_002710171.1| PREDICTED: protocadherin alpha 13 [Oryctolagus cuniculus]
Length = 2126
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + V +VNDN P +P Y + EN +V L ASD D P++ ISY I PE
Sbjct: 986 IQVAVLDVNDNAPAFEEPAYRVVLSENVQNDTSVVHLNASDPDEGPNREISYGIRTILPE 1045
Query: 129 S 129
S
Sbjct: 1046 S 1046
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V+++V +VNDN P Y + EN + +V ++A D D + R+SY +
Sbjct: 435 VWVEVADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSARDADARENARVSYSL 488
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V+++V +VNDN P Y + EN + +V ++A D D + R+SY +
Sbjct: 1820 VWVEVADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSARDADARENARVSYSL 1873
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 259 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 318
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 319 GLVEYAINRRQSDKEQMFRIDPRTGAI 345
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 673 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 720
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 721 KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 50 FNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
FN+ IG+ G P+ + L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1684 FNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTA 1743
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I AG F++D G
Sbjct: 1744 KSLHGAENANLSYEIPAGVANDLFHVDWQRG 1774
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
+Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 732 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 791
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 792 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 850
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 851 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNI 884
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-Q 64
V Y+ + E+ G+ I A G L Q + Y+ S + + I +D G P
Sbjct: 966 VTYSLVKESGKGLFAI---DARSGHLILSQHLDYESS----QRHTLIVTATD-GGVPSLS 1017
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1018 TNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1075
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P+ + Y I++G
Sbjct: 2738 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSG 2797
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2798 NDEHMFTIDLVTGVL 2812
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1866 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASD 1925
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ +VQ++A D DL +
Sbjct: 1926 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNA 1985
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1986 RLVYSL-ANETQWQFAIDGQSG 2006
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 851 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 910
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D +++Y +
Sbjct: 911 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL 970
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 971 VKESGKGLFAIDARSGHL 988
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1892
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1893 NKFSIDSSSGEL 1904
>gi|327270457|ref|XP_003220006.1| PREDICTED: protocadherin alpha-C1-like [Anolis carolinensis]
Length = 895
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 50 FNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI + SDL P + +Q+ +VNDN P L+ + + EN + ++Q+ A+
Sbjct: 408 YNITVTASDLGSPPIATQKTLRVQIADVNDNPPKFLNQMREVSVTENNQPGVSLLQVTAT 467
Query: 109 DGDLDPDQRISY-----KISAGNPESYFNIDIGSG 138
D DL + R+SY I SY ID SG
Sbjct: 468 DSDLGENGRVSYLLRDIDIQGSALSSYLGIDASSG 502
>gi|301631097|ref|XP_002944644.1| PREDICTED: protocadherin gamma-B5-like, partial [Xenopus (Silurana)
tropicalis]
Length = 638
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 23/138 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIV 69
Q++ + S IV +A D +L P ++NI I S G P Q+ I
Sbjct: 322 QLLSSSSRYYKIVTTSALDRELVP---------------WYNITILSTDRGSP-QLSSIK 365
Query: 70 YIQ--VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+I+ + +VNDN PM + + A + EN I + ASD D+ + +I Y IS N
Sbjct: 366 FIKLDISDVNDNPPMFMKSTFVAYLPENNLPGASIYSIQASDLDIGDNAKIIYSISNINT 425
Query: 128 ES-----YFNIDIGSGSL 140
E YF+I+I +G L
Sbjct: 426 EDFPVSPYFSINIETGVL 443
>gi|345328749|ref|XP_003431299.1| PREDICTED: protocadherin-23-like [Ornithorhynchus anatinus]
Length = 3433
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
S+ + + SD P + I V + NDN P+ P ++A + EN PI ++A
Sbjct: 2709 SHRLVILASDRGHPPLTATATIVISVLDTNDNPPVFPTPEHHAHVRENTLLGSPIAVISA 2768
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D + ++Y I +GN + F++D +G++
Sbjct: 2769 NDCDSGTNGEVTYTIISGNEKGCFHVDEKTGAV 2801
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 30/160 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A + E Q ++Q++ASD D + +I Y I +GN F ID S +
Sbjct: 2324 YQASVWEGQLYSAYVLQVSASDMDSGLNGQIEYSILSGNLNDTFQIDSTSGVITTDAILD 2383
Query: 60 ---GGPDQVYL--------------IVYIQVQNVNDNVPMTL--DPVYYAQIVENQSGIL 100
+++ + +V IQV ++N+N P+ L DPV ++ EN S
Sbjct: 2384 HNLATSNRLVIQATDKGLPSLSGTSVVVIQVVDINNNAPVFLPSDPV---EVAENASPGY 2440
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q++A D DL P S+ GNP + F ID +G +
Sbjct: 2441 IVTQVSAYDVDLSPALAFSFT-KEGNPGTKFAIDPITGKI 2479
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P ++A + EN PI ++A+D D + ++Y I +GN + F++D
Sbjct: 2747 PEHHAHVRENTLLGSPIAVISANDCDSGTNGEVTYTIISGNEKGCFHVDEKTGAVNLIKS 2806
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G + + ++++ V + ND+ P + PV + + EN
Sbjct: 2807 LDYEETTKFTLTVQASDEGSKNVAFSVIFVSVLDDNDHAPQFVLPVLKSVVYENLPSFFT 2866
Query: 102 IVQLAASDGDLDPDQRISYKISA 124
+ + A D D P ++Y I +
Sbjct: 2867 VCTINALDFDTGPYGHLTYSIQS 2889
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT----- 59
+Y + EN +V + AS + ++Y+I +GN + F +D + +LT
Sbjct: 2220 LYEGTVTENCEAGTSVVTVEASALN-SRGSALTYRILSGNEDGTFFLDTNTGELTVKEPM 2278
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + V + VQ++NDN+P Y A + E Q +
Sbjct: 2279 FLDFEVRHEIHLLVLAENHEHRAHCKVRVLVQDMNDNIPSFEQSNYQASVWEGQLYSAYV 2338
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q++ASD D + +I Y I +GN F ID SG
Sbjct: 2339 LQVSASDMDSGLNGQIEYSILSGNLNDTFQIDSTSG 2374
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 33/161 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG--- 60
DPV ++ EN S + Q++A D DL P S+ GNP + F ID +TG
Sbjct: 2428 DPV---EVAENASPGYIVTQVSAYDVDLSPALAFSFT-KEGNPGTKFAID---PITGKIM 2480
Query: 61 ------------------GPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D V+ + +QV +VNDN P + Y I E
Sbjct: 2481 LVKSLDFEETAEYELQIQASDSVHHTETAIRVQVLDVNDNPPEFVQDSYQVTISELTPVG 2540
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ++A+D DL ISYKI + E F+ID+ +GS+
Sbjct: 2541 SFVLAVSATDRDLGRSGVISYKIISSCEE--FSIDLKNGSI 2579
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ V++ ND+ P + P+ I ENQ + I + A D D + I YKI GN E
Sbjct: 1892 ILCTVEDENDHAPRFILPIPEIHIPENQEPEI-IYTILAKDMDSGNNGAIQYKIIGGNAE 1950
Query: 129 SYFNIDIGSGSL 140
YF ++ SG L
Sbjct: 1951 EYFALNHTSGEL 1962
>gi|402872887|ref|XP_003900325.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B7-like [Papio
anubis]
Length = 1804
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 1280 TDGALDREQ---------TPE--YNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQ 1328
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
Y + EN I Q++ASD D P+ R+SY + A + ES
Sbjct: 1329 SAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLES 1372
>gi|195354342|ref|XP_002043657.1| GM19756 [Drosophila sechellia]
gi|194127825|gb|EDW49868.1| GM19756 [Drosophila sechellia]
Length = 1638
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 39 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 98
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 99 TENIQNIFDIDIYSG 113
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 384 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLTVKAED 443
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 444 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 503
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 504 IHYFIMSGNEQGKFKMDSTTGDL 526
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 58 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 117
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 118 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIERLSVFENAL 177
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 178 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 212
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLT------ 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + DL
Sbjct: 474 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 533
Query: 60 ---------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG P + V I + ++NDN P L +Y + E+ I
Sbjct: 534 YEMSKFYFLTIQAIDGGTPPLSNHAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKI 593
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D D + ++Y I G+ F ID +G++
Sbjct: 594 LDVKATDEDSDVNGLVTYNIERGDNIGQFLIDPKNGTI 631
>gi|229442265|gb|AAI72775.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 1343
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLL 1194
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+Y I E+ ++QL A D D ++++ I++GN +F I + L Q+
Sbjct: 1141 VFYPSIQEDAPVGTSVLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLLSTAQQL 1200
Query: 66 -------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ V + + +VNDN P+ ++ ++ E S + P
Sbjct: 1201 DRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSP 1260
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +L ASD D + R++Y I + E+ F+ID+ +G
Sbjct: 1261 GPVYRLVASDLDEGLNGRVTYSIEDSDEEA-FSIDLVTG 1298
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 259 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 318
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 319 GLVEYAINRRQSDKEQMFRIDPRTGAI 345
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 673 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 720
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 721 KVSLRESPKAPTQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------TGG---- 61
+ + A D D + R++Y+I+ GN E F I+ + + GG
Sbjct: 1627 VAHIVAVDRDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNL 1686
Query: 62 -----------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P Q L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1687 IINAKDHGQPEPKQSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1746
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+SY+I AG F++D G
Sbjct: 1747 HGAEMANLSYEIPAGVANDLFHVDWQRG 1774
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 732 TQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVARPDMLSVRTQP 791
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 792 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 850
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 851 AASGDIAHRSPVRYSIYSGDPDGYFSIETNSGNI 884
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 851 AASGDIAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 910
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D ++SY +
Sbjct: 911 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSL 970
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 971 VGDSGKRLFAIDARSGHL 988
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1020 LTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1075
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P+ + Y I++G
Sbjct: 2738 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSG 2797
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2798 NDEHMFTIDLVTGVL 2812
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1892
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1893 NKFSIDSSSGEL 1904
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1866 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASD 1925
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ ++Q+ A D DL +
Sbjct: 1926 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVLQINAVDADLGVNA 1985
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1986 RLVYSL-ANETQWQFAIDSQSG 2006
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 259 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 318
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 319 GLVEYAINRRQSDKEQMFRIDPRTGAI 345
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 673 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 720
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 721 KVSLRESPKAPTQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 30/148 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------TGG---- 61
+ + A D D + R++Y+I+ GN E F I+ + + GG
Sbjct: 1627 VAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNL 1686
Query: 62 -----------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
P + L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1687 IISAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSL 1746
Query: 111 DLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I AG F++D G
Sbjct: 1747 HGAENANLSYEIPAGVANDLFHVDWQRG 1774
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 851 AASGDIAHRSPVKYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 910
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D ++SY +
Sbjct: 911 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSL 970
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + + F ID SG L
Sbjct: 971 VSDSGKRLFAIDARSGHL 988
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 1020 LTILVDVQDVNDNPPVFEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1075
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 732 TQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 791
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 792 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 850
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 851 AASGDIAHRSPVKYSIYSGDPDGYFSIETNSGNI 884
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P + Y I++G
Sbjct: 2738 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPSSEVVYDITSG 2797
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2798 NDEHMFTIDLVTGVL 2812
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1833 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1892
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1893 NKFSIDSSSGEL 1904
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 49 YFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++N+ + G P + L V I V +VNDN P Y A I E ++QL A
Sbjct: 390 FYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNA 449
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+D D + +SY I+ GN +F +D SG
Sbjct: 450 TDPDEGDNGTVSYSITGGNDLGWFQVDFQSG 480
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
Y I E S ++Q++A+D D + RI+Y+IS+ + +
Sbjct: 535 YKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQ 594
Query: 48 ------SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQS-GI 99
S ++ + + G P + + V + + ++NDN P+ Y+A I+EN+ G
Sbjct: 595 LDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGK 654
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L +Q+ A+D D + ISY I GN F+ID +G
Sbjct: 655 L--LQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTG 691
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y A I E ++QL A+D D + +SY I+ GN +F +D S L
Sbjct: 430 YTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLD 489
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
P V + + + NDN P + Y I E S +
Sbjct: 490 REQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATV 549
Query: 103 VQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSGSL 140
+Q++A+D D + RI+Y+IS+ + + F ++ +G L
Sbjct: 550 LQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVL 589
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
++ L ASD D+ + I Y IS GN + F+++ + L Q+Y +
Sbjct: 1283 VINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQ 1342
Query: 69 ------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V + V +VNDN P+ + EN + P+ + ASD D +
Sbjct: 1343 DHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNA 1402
Query: 117 RISYKISAGNPESYFNID 134
I++ + + P F+++
Sbjct: 1403 HIAFSMYSQTPSKTFSVN 1420
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 34/158 (21%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------DL 58
+ EN + P+ + ASD D + I++ + + P F+++ + +
Sbjct: 1378 VRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETM 1437
Query: 59 TGGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D L+V +QV + NDN P + P A L +
Sbjct: 1438 PAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAA-----GSSLNV 1492
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D + + +++Y I +GN YFN+ +G L
Sbjct: 1493 MTITAEDPDRNSNGKVTYSIISGN-NGYFNLHPSTGQL 1529
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 29/157 (18%)
Query: 7 YYAQIVENQS-GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----IGSDLTGG 61
Y+A I+EN+ G L +Q+ A+D D + ISY I GN F+ID + S L
Sbjct: 642 YFASIMENEPPGKL--LQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASL 699
Query: 62 PDQV--------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+V +V + V N DN+P+ L +Y + EN
Sbjct: 700 DHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTL 759
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ A+ D + ISY I +G+P + F +D G
Sbjct: 760 VGRVYATTK--DKNGSISYAIVSGDPTNLFLVDSTGG 794
>gi|335283648|ref|XP_003124046.2| PREDICTED: protocadherin gamma-B7-like [Sus scrofa]
Length = 810
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 406 TDGTLDREQ---------TPE--YNVTITATDRGKPPLSSSTTITLHIADVNDNAPVFQQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++A D DL P+ +SY + AG+ E SY ++ SG
Sbjct: 455 ASYEVHVAENNPPGASIAQVSARDPDLGPNGHVSYSLVAGDLEPRALASYVSVSAQSG 512
>gi|47225791|emb|CAF98271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1382
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVN 77
I P + + ++ D + R SY + + + + G + D Y+ V+I +VN
Sbjct: 61 IDPELGIIYTEAVFDREARSSYLLEVQSEDGQESARPGKNKQPNSDTAYVRVFIS--DVN 118
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
DN P+ +Y + E+ L +V ++A+D D + ++ Y+I++GN F+I+
Sbjct: 119 DNKPVFAQRLYEVGVDEDADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGVFDIEPEV 178
Query: 138 GSL 140
G++
Sbjct: 179 GTI 181
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYF 131
+VNDNVP +Y A + E ++Q++A D DL + +I+Y + S+G+ S F
Sbjct: 1 DVNDNVPFFTSSIYEASVTEGAQIGTSVLQVSAHDKDLGLNGQITYTLLSDSSGD-HSLF 59
Query: 132 NID 134
ID
Sbjct: 60 RID 62
>gi|380803071|gb|AFE73411.1| protocadherin gamma-B7 isoform 2 precursor, partial [Macaca
mulatta]
Length = 246
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 58 TDGALDREQ---------TPE--YNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQ 106
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
Y + EN I Q++ASD D P+ R+SY + A + ES
Sbjct: 107 SAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLES 150
>gi|262263272|tpg|DAA06575.1| TPA_inf: protocadherin alpha c1 unspliced isoform [Anolis
carolinensis]
Length = 822
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 50 FNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI + SDL P + +Q+ +VNDN P L+ + + EN + ++Q+ A+
Sbjct: 408 YNITVTASDLGSPPIATQKTLRVQIADVNDNPPKFLNQMREVSVTENNQPGVSLLQVTAT 467
Query: 109 DGDLDPDQRISY-----KISAGNPESYFNIDIGSG 138
D DL + R+SY I SY ID SG
Sbjct: 468 DSDLGENGRVSYLLRDIDIQGSALSSYLGIDASSG 502
>gi|363727494|ref|XP_423746.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Gallus
gallus]
Length = 2864
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG--- 60
P Y I EN ++ + A+DGD + + Y++ G + F ID S +
Sbjct: 185 PEYRESIRENLEVGYEVLTIRATDGDAPANANMLYRLLEPGAGDGVFEIDPRSGVVRTRA 244
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP +V+I V++ NDN P + Y Q+ E+
Sbjct: 245 PVDREEVSEYHLVVEANDQGKDPGPRSATAMVHITVEDENDNYPQFSEKRYLVQVQEDAP 304
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + ++ Y I +GN + F I SG++
Sbjct: 305 VNSQILQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGAI 347
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ I+Q+ A+D D + ++ Y I +GN + F I S DL D
Sbjct: 295 YLVQVQEDAPVNSQILQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGAIDLINALD 354
Query: 64 QVYL----------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV +VNDN P+ + + A ++EN
Sbjct: 355 YETIREYTLRIKAQDGGRPPLINSSGMVSVQVVDVNDNAPIFVSTPFQATVLENVPLGYS 414
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ YK+
Sbjct: 415 VLHIQAVDADSGENARLEYKL 435
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P + VY+ ++ E+ + ++ L A D D+ + ++Y+I++GN
Sbjct: 498 VSITVLDVNDNNPTFTEKVYHLRLNEDAAVGSSVLTLTAVDRDV--NSVVTYQITSGNTR 555
Query: 129 SYFNIDIGSG 138
+ F I SG
Sbjct: 556 NRFAITSQSG 565
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 29/163 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNID-------- 53
P Y I EN+ ++ L A D D R++Y + A E YF+ID
Sbjct: 76 PSYQVSIPENEPAGTAVIVLRAQDPDEGEAGRLAYSMEALFDERSNDYFSIDPQTGGVVT 135
Query: 54 ---------------IGSDLTGGPDQVYLIVY--IQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ + G P + Y + V + ND+ P+ P Y I EN
Sbjct: 136 ARSLDRETKDTHVLKVTASDHGSPRRRSATTYLTVTVSDTNDHEPVFEQPEYRESIRENL 195
Query: 97 SGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSG 138
++ + A+DGD + + Y+ + G + F ID SG
Sbjct: 196 EVGYEVLTIRATDGDAPANANMLYRLLEPGAGDGVFEIDPRSG 238
>gi|297295322|ref|XP_001088899.2| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 1721
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDN P+
Sbjct: 1304 TDGALDREQ---------TPE--YNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQ 1352
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
Y + EN I Q++ASD D P+ R+SY + A + ES
Sbjct: 1353 SAYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYSLVASDLES 1396
>gi|426365078|ref|XP_004049615.1| PREDICTED: cadherin-23-like [Gorilla gorilla gorilla]
Length = 626
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 144 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 202
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 203 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 262
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 263 RVLASDADSGCNARLTFNITAGNRERAFFINATTG 297
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNP 127
VY+ + + NDNVPM P Y + E + ++ + A D D P+ ++Y I AGN
Sbjct: 11 VYVTIVDENDNVPMFQQPHYEVLLDEGPDTLNTSLITIQALDLDEGPNGTVTYAIVAGNI 70
Query: 128 ESYFNIDIGSG 138
+ F+ID G
Sbjct: 71 INTFHIDRHMG 81
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD---------- 57
Y + EN + L A D DL+P Y I +GN F + +
Sbjct: 140 YIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQ 199
Query: 58 -------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
L GG P + + V I +Q+VNDN P+ Y+A + EN
Sbjct: 200 ISGFLDRETTPAYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVPENS 259
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
+ ++Q+ ASD D D + + Y I+ + E F ID +G++
Sbjct: 260 TVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDSQTGAI 305
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + + + + G P+ Q + I V++ NDN P P Y A I E+ + +V+
Sbjct: 1872 HSRYTLQVQASDRGKPNSLQGQCNITILVEDQNDNAPRFELPKYIANIAEDAAIGSSVVR 1931
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+D DL + R+ Y + A + F ID SG
Sbjct: 1932 IKANDADLGINARLVYAL-ANETQWQFAIDSKSG 1964
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD +QR SY+ + +D GG +I +Q+ ++NDN P+ Y
Sbjct: 633 GELDYEQRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDINDNRPVFYPREY 680
Query: 89 YAQIVENQS--------GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E QS PIV + A+D D ++SY+I GN F I+ +G +
Sbjct: 681 NVSLKEFQSQSSQGQTNSNAPIVAVVATDPDSGDFGQVSYRIVNGNEAGIFRIERSTGEI 740
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 75 NVNDNVPMTLDP--VYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESY 130
+ NDN P+ DP Y A+I E I Q+ A D D + P+ + Y I++GN E
Sbjct: 2717 DFNDNAPI-FDPSAKYEAEISELAPLRYSIAQIMAFDADEENTPNSEVVYDITSGNDEHM 2775
Query: 131 FNIDIGSGSL 140
F ID+ +G L
Sbjct: 2776 FTIDLVTGVL 2785
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +D P ++++V ++NDN P VY+A ++E ++Q+ A D D
Sbjct: 435 VATDKGTPPLHATKSIFLRVTDINDNAPEFEHSVYHANVMEVADPGTSVLQVVAHDRDEG 494
Query: 114 PDQRISYKISAGNPES---YFNIDIGSG 138
+ ++Y + A PE+ +F ID +G
Sbjct: 495 NNSVVTYFL-AETPETHAQWFQIDSQTG 521
>gi|322793232|gb|EFZ16889.1| hypothetical protein SINV_09531 [Solenopsis invicta]
Length = 1797
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY--- 120
Y V I V++VNDN P+ P Y QI E LP ++ + A+DGD D Q I Y
Sbjct: 200 YTTVVIHVKDVNDNPPVFERPNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLT 259
Query: 121 --KISAGNP-ESYFNIDIGSGSL 140
I NP S F+I+ +G +
Sbjct: 260 GQGIDPDNPANSKFDINRTTGEI 282
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY-----KISAGNP-ESYFNID--- 53
P Y QI E LP ++ + A+DGD D Q I Y I NP S F+I+
Sbjct: 220 PNYRTQITEEDDRTLPKRVLGVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 279
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 280 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 339
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKI 122
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 340 GNVTENGTAGMVVMTMTAVDYD-DPNEGTNARLIYSI 375
>gi|294085321|ref|YP_003552081.1| autotransporter-associated beta strand repeat-containing protein
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292664896|gb|ADE39997.1| autotransporter-associated beta strand repeat protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 1581
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 31/156 (19%)
Query: 11 IVENQSGILPIVQLAASDGDLDP--------------------------DQRISYKISAG 44
I EN +G P+ + A DGD DP + + Y+ AG
Sbjct: 461 IAENSTGNTPVGAVTARDGDGDPITYTKSGDDADKFDIDRDTGAITVRDNAVLDYEAQAG 520
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
P S+ I S G V + + NVN+ + P + + EN + P+
Sbjct: 521 TPLSFTVIATASGADGRISTSEQQVTVHLSNVNEPIIWNHVPKTFT-LAENSNASTPVGS 579
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A DGD DP ++Y +S G+ F+ID +G++
Sbjct: 580 VSAQDGDGDP---VTYSMS-GDHADKFDIDRDTGAI 611
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 38/163 (23%)
Query: 11 IVENQSGILPIVQLAASDGDLDP---------------------------------DQRI 37
+ EN G P+ ++A DGD DP + +
Sbjct: 348 LAENSVGGTPVGAVSARDGDGDPVTYSLTNTLAGKEDNEAGKFQINTTTGAITVRDNAVL 407
Query: 38 SYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
Y+ AG P S+ + I G + V + + NVN+ + P + I EN +
Sbjct: 408 DYEAQAGAPLSFKVVAIAEGPDGRTSRAEQEVTVTLSNVNEPISWNHVPRTFT-IAENST 466
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
G P+ + A DGD DP I+Y S G+ F+ID +G++
Sbjct: 467 GNTPVGAVTARDGDGDP---ITYTKS-GDDADKFDIDRDTGAI 505
>gi|149726795|ref|XP_001502193.1| PREDICTED: protocadherin gamma-B2 [Equus caballus]
Length = 850
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 50 FNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I +D P + + + + +VNDN P+ Y + EN I Q++AS
Sbjct: 418 YNVTIMATDRGKPPLSSSVSITLHIADVNDNAPVFHQASYVVHVAENNPPGASIAQVSAS 477
Query: 109 DGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
D DL P+ R+SY I A + E SY ++ SG
Sbjct: 478 DPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 512
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVMVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNHMGFFIIHPVTGLL 1194
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
++++ A D D R+ Y I +GN + +F
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHF 2427
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEVTNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN +V L D D+ R ++ I+ G+P F I +G +
Sbjct: 2911 YRGSVVENSEPGKLVVTLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2970
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P VY ++ E+ + P
Sbjct: 2971 TLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLVYTGKVHED---VFPG 3027
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3028 HFILKVSATDLDTDTNAQITYSLH-GPGAHEFKLDPHTGEL 3067
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + I ++ IV ++A D +D Q + Y+I +GN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSIHQDWPVGKSIVTMSAID--VDELQNLKYEIISGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
>gi|363745768|ref|XP_426993.3| PREDICTED: protocadherin beta-15-like, partial [Gallus gallus]
Length = 461
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 46 PESYFNI---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PE F + D GS G Q+++IV +VNDNVP+ VY ++EN +
Sbjct: 76 PEMDFTLVATDGGSPPRSGTTQIHIIV----MDVNDNVPVFTQKVYIGHVLENAPEGSVV 131
Query: 103 VQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSLG 141
+++ A+D D + ISY+ S G+ S F I+ +G +G
Sbjct: 132 LRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIG 172
>gi|50510647|dbj|BAD32309.1| mKIAA0811 protein [Mus musculus]
Length = 1654
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 81 DLVSLVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 140
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 141 LSVEPGSNIHQLFAVDSESG 160
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 105 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWIT 163
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 164 TLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 223
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F+I
Sbjct: 224 NEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSI 262
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 589 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAIVGDVILT 647
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F ID G L
Sbjct: 648 VSASDDDGPVNSVITYSLVGGNQLGHFTIDPKKGKL 683
>gi|156379563|ref|XP_001631526.1| predicted protein [Nematostella vectensis]
gi|156218568|gb|EDO39463.1| predicted protein [Nematostella vectensis]
Length = 868
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------- 52
+Y I E S ++ + A+D D + I+Y I G+ ++ F++
Sbjct: 710 LYLTSISEATSAGTDVIPVHATDVDTGINAEITYSIVGGDAKNQFSVNSTGMIRTIATLD 769
Query: 53 --DIGS-------DLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
DI S G P Q + V + + +VNDN + + A+++E+
Sbjct: 770 REDIASYTLLVQASDRGVPPQTETVHVTVTILDVNDNAAVFSQSAFSARVLEDAPVGFRF 829
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ASD D + R++Y I +GN ++ I+ +G+L
Sbjct: 830 MNISASDADSGDNARLTYSIQSGNTDNVVAIESATGAL 867
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------- 52
+Y I EN + + ++A +D D+ + +Y I+ G+ F+I
Sbjct: 605 IYTTTIPENMASGASVARVATTDRDIGINANHTYSITGGDGLGKFSIVQSTGVITALPGL 664
Query: 53 ----------DIGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
I + G P Q+Y + V I + + NDN P+ +Y I E S
Sbjct: 665 DYETKYTYYLSITARDRGSP-QLYAVAGVRIFLSDTNDNKPVFSPTLYLTSISEATSAGT 723
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ + A+D D + I+Y I G+ ++ F+++
Sbjct: 724 DVIPVHATDVDTGINAEITYSIVGGDAKNQFSVN 757
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 30/154 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL- 58
+ ++ EN S +++L D D + +++Y I+ G F ID +GS L
Sbjct: 501 HVVEVAENASVGSTVLELRCEDVDEGANSQLTYNITTGVD---FTIDKSSGVVAVGSSLD 557
Query: 59 ---------------TGGPDQ----VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G +Q + + I+V + NDN P+ +Y I EN +
Sbjct: 558 RETRDLYELNITVRDRGNTEQERRAAVMQLTIEVTDENDNPPVFTQEIYTTTIPENMASG 617
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ ++A +D D+ + +Y I+ G+ F+I
Sbjct: 618 ASVARVATTDRDIGINANHTYSITGGDGLGKFSI 651
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 73 VQNVNDNVP-MTLDPVYYAQIVENQ--SGI-LPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ +VN++ P T Y A I E+ + I + I +AA+D D D IS+ I AGN E
Sbjct: 377 ISDVNEHTPQFTSGGSYTAVIAEDAPDTAIGVTIATVAATDADHGSDGAISFAIIAGNEE 436
Query: 129 SYFNIDIGSG 138
F ID SG
Sbjct: 437 DKFLIDTTSG 446
>gi|426365064|ref|XP_004049609.1| PREDICTED: cadherin-23-like [Gorilla gorilla gorilla]
Length = 455
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 318 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 377
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 378 GINSVLSYYITEGNKDMTFRMDRSSGEIA 406
>gi|291244988|ref|XP_002742375.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2697
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 31/167 (18%)
Query: 3 LDP-VYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGNPESYFNID------ 53
DP +Y I E S +V + A+D D +D + I + I+ GN S+F+ID
Sbjct: 1586 FDPRMYSVSIDEGLSAGEAVVTVIATDVDSTVDDNNVIQFSITDGNTGSHFSIDSSTGDI 1645
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIV 93
+DL GG D + + Y+ V VN+ P+ Y +
Sbjct: 1646 TTADVLDYEAMQVYNLEVTATDLNGGADGLTDVSYVTVVVNAVNEATPVFQSTPYSVSVP 1705
Query: 94 ENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPESYFNIDIGSG 138
E + + Q+ +D DL P ++ +I+AGN E +F+ID +G
Sbjct: 1706 EVIATGESVFQVNVTDDDLPSHPHGQVKCEITAGNSEGHFSIDGETG 1752
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DL 58
+D Y++ + S I L + + A+D D+ + R+SY S+GN +F ID + +
Sbjct: 2219 IDQASYSESIPEDSYIGLVVCDVDATDEDIGANARLSYSFSSGNELGHFAIDTDTGIITI 2278
Query: 59 TGGPDQVYLIVYIQVQNVNDN---------------------VPMTLDPVYYAQIVENQS 97
D ++ Y+ V+DN +P+ Y ++EN +
Sbjct: 2279 DSELDHEAVVSYVLAVTVSDNGTPVMAADVDVTVNVNDVNDNIPLFTMETYTFNVLENSA 2338
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + RI Y I +G ++F ID SG +
Sbjct: 2339 AGTLVNTIVATDLDEAENGRIIYSIVSGENLNHFAIDSDSGDI 2381
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ +VNDN P+ +D Y++ + S I L + + A+D D+ + R+SY S+GN +
Sbjct: 2208 SIMDVNDNPPV-IDQASYSESIPEDSYIGLVVCDVDATDEDIGANARLSYSFSSGNELGH 2266
Query: 131 FNIDIGSG 138
F ID +G
Sbjct: 2267 FAIDTDTG 2274
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 27/162 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y ++EN + + + A+D D + RI Y I +G ++F ID
Sbjct: 2328 TYTFNVLENSAAGTLVNTIVATDLDEAENGRIIYSIVSGENLNHFAIDSDSGDIFVAVSD 2387
Query: 54 ----------IGSDLTGGPDQVYL---IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ T D V I V + NDN P+ VY Q+ EN
Sbjct: 2388 IDRENFDYYSLTCKATDNGDLSLFSEATVLITVLDENDNSPVFTLDVYETQLTENSPVGT 2447
Query: 101 PIVQLAASDGDLDPDQRISYKISAGN--PESYFNIDIGSGSL 140
+ ++A+D D D + I Y I A YF +D SG +
Sbjct: 2448 SVTVISATDIDQDINADIRYSIPASQIIANEYFKVDSTSGEI 2489
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 31/149 (20%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--PESYFNID----- 53
TLD VY Q+ EN + ++A+D D D + I Y I A YF +D
Sbjct: 2430 FTLD-VYETQLTENSPVGTSVTVISATDIDQDINADIRYSIPASQIIANEYFKVDSTSGE 2488
Query: 54 ------IGSDL------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
I SD +G P + V + +N+NDN+P DP YY+
Sbjct: 2489 ITVKFPIDSDTIPYVEFTVYAEDSGAPTMRGTATVLVYTRNINDNIPR-FDPEYYSTEFS 2547
Query: 95 NQSGIL-PIVQLAASDGDLDPDQRISYKI 122
+ + PI + A+DG D Q +SY +
Sbjct: 2548 YLNTLHQPITTVMATDG--DRGQLVSYHV 2574
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 69 VYIQVQNVNDNVPMTLDP-VYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAG 125
+ + V +VNDN P+ DP +Y I E S +V + A+D D +D + I + I+ G
Sbjct: 1572 ISVTVTDVNDNNPV-FDPRMYSVSIDEGLSAGEAVVTVIATDVDSTVDDNNVIQFSITDG 1630
Query: 126 NPESYFNIDIGSGSL 140
N S+F+ID +G +
Sbjct: 1631 NTGSHFSIDSSTGDI 1645
>gi|449481209|ref|XP_004177258.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Taeniopygia guttata]
Length = 2675
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG--- 60
P Y I EN ++ + A+DGD + + Y++ G + F ID S +
Sbjct: 74 PEYRESIRENLEVGYEVLTIRATDGDAPANANMLYRLLEPGAGDGVFEIDPRSGVVRTRA 133
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP +V+I V++ NDN P + Y Q+ E+
Sbjct: 134 SVDREEVSEYHLVVEANDQGKDPGPRSATAMVHITVEDENDNYPQFSEKRYLVQVPEDAP 193
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A+D D + ++ Y I +GN + F I SG++
Sbjct: 194 VNSQILQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGAI 236
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P + VY+ ++ E+ + ++ L A D D+ + ++Y+I++GN
Sbjct: 387 VSITVLDVNDNNPTFTEKVYHLRLNEDAAVGSSVLTLTAVDRDV--NSVVTYQITSGNTR 444
Query: 129 SYFNIDIGSG 138
+ F I SG
Sbjct: 445 NRFAITSQSG 454
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y Q+ E+ I+Q+ A+D D + ++ Y I +GN + F I S DL D
Sbjct: 184 YLVQVPEDAPVNSQILQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGAIDLINPLD 243
Query: 64 QVYL----------------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +V +QV +VNDN P+ + + A ++EN
Sbjct: 244 YETIREYTLRIKAQDGGRPPLINSSGMVSVQVVDVNDNAPIFVSTPFQATVLENVPLGYS 303
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ YK+
Sbjct: 304 VLHIQAVDADSGENARLEYKL 324
>gi|322789048|gb|EFZ14506.1| hypothetical protein SINV_14408 [Solenopsis invicta]
Length = 470
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
L Y A + E ++ + A D D+ P + + SY I +GN F +D
Sbjct: 196 LQNAYNASVSEGAVHGTRVLTVRAIDKDIKPQNNQFSYSIISGNLGQAFKVDPQTGDVET 255
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q +V+I++ +VNDN P+ P + EN+
Sbjct: 256 AKLLDRETLPVYDLTIGAIDTGSPPQTGTAMVHIELLDVNDNGPVFDPPEVVGYVSENEP 315
Query: 98 GILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
I+ L+A+D DL P+ +Y++ G +D SG L
Sbjct: 316 TGTSIMTLSATDPDLPPNGAPFTYRLIGGKQSDMVTLDKHSGVL 359
>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
Length = 3089
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 37/167 (22%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----- 56
T D Y A I E+ + I+ + A D D + + R++Y+I P F ID S
Sbjct: 813 TFDRAYTADIYEDTAIGTVILTVTAKDADANENARLTYRIVT--PVREFKIDSKSGAISI 870
Query: 57 ------------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQI 92
L+G D V I + + NDN P+ P Y A I
Sbjct: 871 AAALDRETRSTFSLEVRASDNGVPSLSGRTD-----VVISILDSNDNAPVFSQPSYNASI 925
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
E+ ++Q+AA+D D +Q+I ++++ N F ID +G
Sbjct: 926 AEDVEIGTRVLQVAATDKDEGVNQQIHFELAENENGNGTFAIDGSTG 972
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------IGSDLT 59
+Y A + E++ IVQ+ A+D D + I Y I +GN S F ID + + +
Sbjct: 720 IYNADVREDEKVGRQIVQVTATDVD---SKTIYYSIVSGNVRSRFGIDPQGYIYLAAPID 776
Query: 60 GGPDQVYLIV--------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
++ Y +V ++V + N++ P T D Y A I E+ + I+ +
Sbjct: 777 YLREKEYTLVVQASDLLLNSTATVKMRVIDTNNHAP-TFDRAYTADIYEDTAIGTVILTV 835
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + + R++Y+I P F ID SG++
Sbjct: 836 TAKDADANENARLTYRIVT--PVREFKIDSKSGAI 868
>gi|327273598|ref|XP_003221567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Anolis carolinensis]
Length = 2829
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 27/163 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG--- 60
P Y I EN ++ + A+D D + + Y+I G E F ID S +
Sbjct: 166 PEYRENIRENLEVGYEVLTIRATDKDAPDNANLLYRILEPGAGEGVFEIDPHSGVVRTCA 225
Query: 61 -----------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GP + V+I V++ NDN P + Y QI E+
Sbjct: 226 PVDREEVSEYHLVVEANDQGKDPGPRSATVTVHISVEDENDNSPQFSEKRYQVQIPEDTP 285
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++Q+ A+D D + ++ Y I +GN + F I SGS+
Sbjct: 286 INNQVLQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGSI 328
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------------- 50
Y QI E+ ++Q+ A+D D + ++ Y I +GN + F
Sbjct: 276 YQVQIPEDTPINNQVLQVQATDRDRGSNAQVHYSIVSGNLKGQFYIHSFSGSIDLINPLD 335
Query: 51 -------NIDIGSDLTGGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ I + G P Q+ +V IQV +VNDN P+ + + A ++EN
Sbjct: 336 YETIREYTLRIKAQDGGRPPQINSSGMVSIQVLDVNDNAPIFVSTPFQATVLENVPVGYS 395
Query: 102 IVQLAASDGDLDPDQRISYK-ISAGNPES 129
++ + A D D + R+ YK I +P S
Sbjct: 396 VLHIQAVDADSGDNARLEYKLIEVAHPSS 424
>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
Length = 3255
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-----------------DLT---- 59
I ++A D D + I+Y IS+GN F I+ + DLT
Sbjct: 1388 IRTISARDRDASMNGIIAYNISSGNEAGLFAINASTGALSLLKNLDYELCQKHDLTISAV 1447
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG Y +V I V++VNDN P+ Y+ ++EN +++L A+D D P+
Sbjct: 1448 DGGWVAKTGYCVVTIYVKDVNDNPPIFKADEYFPSVMENAPSGTTVIRLNATDVDSAPNA 1507
Query: 117 RISYKISAGNPESYFNIDIGSG 138
I+Y + + + + F ID +G
Sbjct: 1508 VIAYSVQSSDSD-LFVIDPNTG 1528
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 30/161 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------ 54
+ +I E+ ++QL ASD D + + Y I GNP + F ID
Sbjct: 440 FKVEISESTLTGTDLIQLIASDADEGINGMVRYAIIDGNPSNEFRIDSVTGVLSIARPLD 499
Query: 55 ------------GSDLTGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILP 101
SD P V I + ++ND VP L P Y + EN LP
Sbjct: 500 RERKSSYTLKIQASDRGSSPRSDTATVSILLSDINDVVPKFELSP-YTVSVPENLE-TLP 557
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D + R++Y +++GN + F + SG L
Sbjct: 558 KIILQVVARDDDQGLNSRLTYSLASGNEDGAFTLS-SSGQL 597
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P + A+I+EN S I+ ++A D D + ++ Y
Sbjct: 928 PFSSYEKLEITVLDVNDNQPQFKQDPFIAEIIENLSP-RKILTISAEDKDSGSNGQVEYT 986
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E++F+I+ +G +
Sbjct: 987 IFDGNKEAFFSINRVNGEI 1005
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN +++L A+D D P+ I+Y + + + + F ID G T G
Sbjct: 1479 YFPSVMENAPSGTTVIRLNATDVDSAPNAVIAYSVQSSDSD-LFVIDPNTGIITTQGFLD 1537
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ ++ V +Q++ N+ VP + +YY ++ E +
Sbjct: 1538 YETKQHYHLTVKAFNVPDEERCSFVTVTVQLEGANEYVPRFVSKLYYFEVSEAAPKGTVV 1597
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D D + Y I + + F ID +G +
Sbjct: 1598 GEVFASDRDGGIDGDVHYLIFGSSRKKGFQIDKKTGKI 1635
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +Q++NDN P+ + + EN I+QL A+D D P+ ++Y I +G +
Sbjct: 7 VEITLQDINDNPPVFPTDILDLTVEENVGDGSKIMQLTATDADEGPNALVTYTIISGADD 66
Query: 129 SYFNIDIGSGSL 140
S F ID SG L
Sbjct: 67 S-FRIDPESGDL 77
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + S GN S ID LTG D+ + Y
Sbjct: 350 VFRAQATDPDSGPNSYIQYSLLGSLGNKFSIGIIDGEVRLTGELDREDISNYTLTIIAKD 409
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
I V ++NDN P + +I E+ ++QL ASD D +
Sbjct: 410 KGEPSLSSSMDMNIIVLDINDNSPHFSQRHFKVEISESTLTGTDLIQLIASDADEGINGM 469
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GNP + F ID +G L
Sbjct: 470 VRYAIIDGNPSNEFRIDSVTGVL 492
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ Y+ + + + GG D + VY + +VNDN P+ Y A ++EN I+
Sbjct: 190 QQYYVLTVCAQDGGGQDSC-VRVYFNILDVNDNPPVFSRNSYSASVMENLPPGSTILTFN 248
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNI 133
+D D + ++SY IS+G+ F +
Sbjct: 249 VTDADDGFNSKLSYTISSGDSMGQFQV 275
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + A+I+EN S I+ ++A D D + ++ Y I GN E++F+I+
Sbjct: 952 DP-FIAEIIENLSP-RKILTISAEDKDSGSNGQVEYTIFDGNKEAFFSINRVNGEIRNTR 1009
Query: 54 -------------IGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ + G P + ++ V I V + NDN P ++ A + EN
Sbjct: 1010 QLDREKASQYTLSVKASDKGSPARSSIVKVIIYVLDDNDNAPR-FSQIFSAFVAENAVLG 1068
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
+ Q+ SD D + Y I+ + + N++ G
Sbjct: 1069 CFVTQVTTSDEDAGANAISRYTIADTSLPFHINLNTG 1105
>gi|432851953|ref|XP_004067124.1| PREDICTED: protocadherin-17-like [Oryzias latipes]
Length = 1141
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 6 VYYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSDLTGG 61
VYY+ + N SG + V + A++G + Y + + N E YF+ + + G
Sbjct: 488 VYYSIVNSNVSGGDVNTYVNVNAANGAI-------YAVRSFNYEQIKYFDFKVLAKDAGS 540
Query: 62 PD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE----NQSGILPIVQ-LAASDGDLDPD 115
P + V I VQ+VNDN+P+ + P+ E G+ IV + A D D
Sbjct: 541 PHLESNATVRISVQDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES 600
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R++Y+IS GN E F ID +G +
Sbjct: 601 GRLTYEISDGNEEHLFEIDPVTGEV 625
>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]
Length = 3475
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
L VY V ++NDN P+ DP+ Y+ +I EN P+V ++A+D D + R+ Y I+AG
Sbjct: 203 LTVYCNVIDLNDNAPI-FDPMSYSNEIFENAPINSPVVTVSATDIDSGANGRVEYSITAG 261
Query: 126 NPESYFNI 133
+ + F I
Sbjct: 262 DEKEDFQI 269
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y + EN+ I+ ++A D D P+ + Y I AGN + F++
Sbjct: 1447 PSYQVIVPENEPVGSTILTVSAPDNDDGPNGMVHYSILAGNERNDFSVHTVTGAIVIRQP 1506
Query: 55 --------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
DL + +V I + ++NDN P +Y A I EN
Sbjct: 1507 LDYDLVQLYQLNISAEDLGYKSKKSIALVTITLTDINDNAPYFNQSLYNAYIAENSPASS 1566
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D + I Y I+ G + F I+ G+G
Sbjct: 1567 FVYRALAHDRDSPKNAIIVYSITGGTGKELFTIEPGTG 1604
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 22 VQLAASDGDLDP-DQRISYKISAGNPESYFNID-----------------------IGSD 57
V + A D D+ P + + SY I GN + F ID +G+
Sbjct: 1780 VTVKAIDKDVRPQNNQFSYSIIGGNNDHSFKIDPQSGQIETARLLDREKIPVHKLIVGAI 1839
Query: 58 LTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
TG P Q +V I + ++NDN P ++EN+ ++ L+ASD DL P+
Sbjct: 1840 DTGVPPQTGTTLVQITLSDINDNGPTFEANDTIGSVLENEPPNTVVMTLSASDPDLPPNG 1899
Query: 117 R-ISYKISAGNPESYFNIDIGSGSL 140
+Y + G +S+F ++ +G L
Sbjct: 1900 APFTYHLVGGRHKSFFTLEKHTGVL 1924
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 21 IVQLAASDG-DLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI---- 68
I+QL A D D + I Y++ GN S F ++ + L P VY +
Sbjct: 1357 ILQLIAKDELDFGVNAEIEYQVMGGNGSSRFAVNKLDGWVVVSGMLNETPGTVYTLNVRA 1416
Query: 69 -------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
V I V VN+ P+ P Y + EN+ I+ ++A D D P+
Sbjct: 1417 VDRGVPPQQDEVTVTIIVTGVNNFAPVFQSPSYQVIVPENEPVGSTILTVSAPDNDDGPN 1476
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y I AGN + F++ +G++
Sbjct: 1477 GMVHYSILAGNERNDFSVHTVTGAI 1501
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + + V + NDN P+ VY A+++E +S I +++A+D D D + +I+Y +
Sbjct: 1008 LQLIVNVTDANDNAPVMDQQVYVAEVMEEESPSQLIAKVSATDADSDENGQITYHLRDDF 1067
Query: 127 PESYFNIDIG 136
N D G
Sbjct: 1068 EAFEINTDTG 1077
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + VQ+ ND+ P YYA + ENQ +V A+D D + RI Y++ G
Sbjct: 689 VRVVVQDTNDHSPEFERQSYYAVVPENQPIGTKVVWPRATDKDAGANARIVYRL-VGEHA 747
Query: 129 SYFNIDIGSGSL 140
F +D SG +
Sbjct: 748 DRFRLDAVSGEI 759
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 40/153 (26%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNI----------------------------DIG 55
++A+D D + RI + I+AG+ F I D
Sbjct: 507 VSATDIDEGANGRIRFSIAAGDDNRDFTISEDSGVVRVAKNLNFERKSLYTITVRAEDCA 566
Query: 56 SDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP-----IVQLAAS 108
D GG + + + I + ++NDN P LD Y A I+EN ++P ++ + A
Sbjct: 567 GDTDGGAEVRFDTARLSITITDINDNPPTFLDSPYLAYIMEN---VIPPNGGYVITVRAY 623
Query: 109 DGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
D D P + ++ Y + G+ + YF I+ +G +
Sbjct: 624 DADSPPFNSQVRYFLKEGDTD-YFKINASTGEI 655
>gi|449267271|gb|EMC78237.1| Protocadherin Fat 4, partial [Columba livia]
Length = 2772
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------------------- 47
Y A++ EN + P++++ A D D + R+ Y++ G
Sbjct: 1014 YSARLPENNAVGAPVLRVRAWDTDWGQNARVRYRLGEGRVRGAPLRIKGKKYVELVLKKP 1073
Query: 48 -----------SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
S +D GS G Q+ +IV +VNDN P+ +Y Q++EN
Sbjct: 1074 LDREEQSEMGFSLIAVDGGSPPRSGTTQIRIIVL----DVNDNSPIFAQDLYVGQVLENA 1129
Query: 97 SGILPIVQLAASDGDLDPDQRISYKIS--AGNPESYFNIDIGSGSL 140
++ + A+D D P+ ISY+ S +S F ID SG +
Sbjct: 1130 PEGSVVLSVLATDLDAGPNGDISYQFSQAVSQSDSAFVIDHVSGEI 1175
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 30/165 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI----SAGNP-ESYFNIDIGSDLT- 59
+Y + EN+ + +L A+D D + R+ Y + S G+P ES+ ++D + +
Sbjct: 261 IYTMVLSENEPAGTSLGRLNATDADAGKNARVRYALEQPSSKGHPVESFVSVDAETGIVR 320
Query: 60 --------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
GG P ++I V +VNDN P+ Y +++EN
Sbjct: 321 ALRPLDYEEAEMHFTVIAMDGGVLPRSGTTQIHIVVLDVNDNAPVFTQDQYVGKVLENAP 380
Query: 98 GILPIVQLAASDGDLDPDQRISYKIS--AGNPESYFNIDIGSGSL 140
++ + A+D D+ + ISY+ S AG S F ID SG +
Sbjct: 381 EGSVVLSVVATDQDVGFNGDISYQFSQVAGQIRSAFVIDPTSGEI 425
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P V +++++ +VNDN P +Y + EN+ + +L A+
Sbjct: 223 YNVTVRARDEGSPALSVSKTLFVRLLDVNDNAPTFTQTIYTMVLSENEPAGTSLGRLNAT 282
Query: 109 DGDLDPDQRISYKI----SAGNP-ESYFNIDIGSG 138
D D + R+ Y + S G+P ES+ ++D +G
Sbjct: 283 DADAGKNARVRYALEQPSSKGHPVESFVSVDAETG 317
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+++++V +VNDN P+ + Y A++ EN + ++++ A D D + R+ Y++ G
Sbjct: 2275 VLWLRVLDVNDNAPVFAEARYSARVPENNAAGALVLRVRAWDADWGQNARVRYRLGEGR 2333
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+++++V +VNDN + + Y A++ EN + P++++ A D D + R+ Y++ G
Sbjct: 994 VLWLRVLDVNDNASVFAEARYSARLPENNAVGAPVLRVRAWDTDWGQNARVRYRLGEGR 1052
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ V +VNDN P+ VY+ +++EN ++++ A+D D+ P+ I+Y+ +
Sbjct: 1964 IHVVVLDVNDNTPVFTQRVYFGKVLENAPEGSVVLRVVATDVDVGPNGEITYQFIQAVSQ 2023
Query: 129 SYFN--IDIGSGSL 140
S F ID SG +
Sbjct: 2024 SDFTFLIDPVSGEI 2037
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
++ + V + NDN+P+ +Y +++EN S +V ++ASD D + I+Y I +
Sbjct: 32 LIRVVVLDTNDNIPVFTRSLYKVRVLENSSQDTLVVAVSASDLDSGTNGEITYSIVQNSE 91
Query: 128 ESYFNIDIGS 137
E++ I S
Sbjct: 92 ENHQTFKISS 101
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 30 DLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
+LD ++ Y ++ N +D GS G Q+ +IV +VNDN P+ +Y
Sbjct: 533 ELDREETAQYILTPEN--GLTAMDGGSPPRSGTTQIRIIVL----DVNDNSPIFAQDLYV 586
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AGNPESYFNIDIGSGSL 140
Q++E+ ++ + A+D D P+ ISY+ S +S F ID SG +
Sbjct: 587 GQVLESAPEGSVVLSVLATDLDAGPNGDISYQFSQAVSQSDSAFVIDPFSGEI 639
>gi|308487574|ref|XP_003105982.1| CRE-CDH-4 protein [Caenorhabditis remanei]
gi|308254556|gb|EFO98508.1| CRE-CDH-4 protein [Caenorhabditis remanei]
Length = 4379
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 33/159 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKISAGNPESYFNIDIGSDLT-- 59
P+Y A + EN + IV++ A+D D + +++KI G+P+S+F ID+ S
Sbjct: 1072 PMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLTFKIERGDPQSFFRIDLTSGYITT 1131
Query: 60 ----------------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG Q+ +IV + V + NDN P +++ +
Sbjct: 1132 SGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNAPTFTQAIHHYNVRSK 1191
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
G L ++ A D D + R+SY I+ G+P F+ID
Sbjct: 1192 FVGKL--CRIFAVDSDEGENARLSYNITEGDPR--FSID 1226
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKIS 123
L V+I++ + ND+ P+ P+Y A + EN + IV++ A+D D + +++KI
Sbjct: 1053 LHVFIRILDRNDHRPVAKMPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLTFKIE 1112
Query: 124 AGNPESYFNIDIGSG 138
G+P+S+F ID+ SG
Sbjct: 1113 RGDPQSFFRIDLTSG 1127
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + + NDN P +D +A + EN S + + A D D + ISY I +GN ES
Sbjct: 1478 VNINDENDNSPYFVDHTAWAFVDENDSVDDVLATVTAFDKDQGNNGIISYSIVSGNEESL 1537
Query: 131 FNIDIGSGSL 140
F ID SG +
Sbjct: 1538 FKIDSQSGEV 1547
>gi|444713193|gb|ELW54101.1| Protocadherin gamma-B2 [Tupaia chinensis]
Length = 759
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I + G P I + ++V +VNDNVP+ Y + EN I Q++AS
Sbjct: 418 YNVTITATDRGKPPLSSRISITLRVSDVNDNVPVFQQASYLVHVPENNPPGASIAQVSAS 477
Query: 109 DGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
D DL P+ +SY I A + E SY +++ SG
Sbjct: 478 DPDLGPNGHVSYSIVASDLEPRALSSYVSVNPQSG 512
>gi|292616384|ref|XP_683121.4| PREDICTED: protocadherin-7, partial [Danio rerio]
Length = 1101
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 235 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVMITDVNDNTPRFEKSVY 284
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN S PI+QL A D D+ + +I Y A +D +G L
Sbjct: 285 EADLPENSSPGAPILQLKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWL 338
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQ-LAASDGDLDPDQRIS 119
P V + V +VNDN P L P+ + ++ S I +V+ ++A+D D + +S
Sbjct: 692 PRSATATVSLSVMDVNDNPPTVLFPMNNSYTLLPPSSNIRTVVRTVSATDTDTGVNANLS 751
Query: 120 YKISAGNPESYFNIDIGSG 138
Y+I GNP F++D +G
Sbjct: 752 YRIVGGNPFKLFDMDAWTG 770
>gi|432920160|ref|XP_004079867.1| PREDICTED: protocadherin-7-like [Oryzias latipes]
Length = 1257
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 232 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVMITDVNDNNPRFEKSVY 281
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN S PI+QL A+D D+ + +I Y A +D +G L
Sbjct: 282 EADLPENSSPGSPILQLKAADADVGVNGQIEYVFGAATESVRRLLRLDESTGWL 335
>gi|313242357|emb|CBY34510.1| unnamed protein product [Oikopleura dioica]
Length = 895
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+ ID+ + G P + I+V++VNDN P +Y+ I+EN IV L A+
Sbjct: 411 YRIDLRAADNGSPPLTTTKTISIKVEDVNDNAPFFQRDMYHVNILENNDVGKSIVSLKAT 470
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D + I Y + G S+F+++ G+G L
Sbjct: 471 DVDEGQNAEIEYIL--GEESSFFSLERGTGDL 500
>gi|410924908|ref|XP_003975923.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 997
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ DL P + I++ + NDN P+ PVY +VEN + I + A D D+
Sbjct: 431 VAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGAYITTVVARDLDMG 490
Query: 114 PDQRISYKIS----AGNPESYF-NIDIGSGSL 140
+ ++SYK++ G+P S F ++D SGSL
Sbjct: 491 SNGKVSYKLADSYVMGSPISTFVSLDPASGSL 522
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNPESYF---------- 50
PVY +VEN + I + A D D+ + ++SYK++ G+P S F
Sbjct: 463 PVYEVAVVENNAPGAYITTVVARDLDMGSNGKVSYKLADSYVMGSPISTFVSLDPASGSL 522
Query: 51 ------NIDIGSDLT-------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVY---YAQI 92
N ++ L GG P VY+++ + NDN P+ P A++
Sbjct: 523 YALRSFNYEVMKQLELRITASDGGSPPLSGTANVYVKIVDQNDNAPLITQPPLNNGSAEV 582
Query: 93 V---ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + SG + I ++ A D D + +SY ++ G+P S F+++ +G +
Sbjct: 583 LLPRDAPSGYV-ITRVEARDADEGTNAVVSYALATGDP-SVFSVNKDTGEI 631
>gi|410956743|ref|XP_003984998.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Felis catus]
Length = 2968
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P IV I+V +VNDN P Y+A + E+ I ++A+D D+
Sbjct: 2235 VASDHGCPPLSSTAIVSIEVLDVNDNPPKFSSLKYHAHVKESTPLGSHITVVSANDRDVG 2294
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
P I Y I +GN +F+++ +G L
Sbjct: 2295 PHAEIIYHIISGNERGHFHLEEKTGVL 2321
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP- 62
P+Y + EN IV + A D D I Y I +GN + F++ S +LT
Sbjct: 1741 PLYKGTVTENCDAGTSIVTVKAVAPDPIQDS-IKYSIFSGNEDGVFSLCSNSGELTVKEP 1799
Query: 63 --------DQVYLI-------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++V LI V + +Q+VNDN+P VY + E Q
Sbjct: 1800 KFLDFEVRNEVQLIILAESRGHRAFSKVAVLIQDVNDNLPCFEQSVYQVSVPEGQFYNAR 1859
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+Q+ A+D D + I Y I +GN F++D+ SG
Sbjct: 1860 IIQVFATDLDSGLNGLIEYSILSGNQGDAFHMDVLSG 1896
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
VY + E Q I+Q+ A+D D + I Y I +GN F++D+ S +
Sbjct: 1845 VYQVSVPEGQFYNARIIQVFATDLDSGLNGLIEYSILSGNQGDAFHMDVLSGVVTANAIL 1904
Query: 62 ----PDQVYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ LIV IQV + NDN P L P +I EN +
Sbjct: 1905 DYEFTNSYSLIVQATDKGMPSLSGTSVITIQVTDTNDNAPAFL-PSGAVEIAENSLPGVI 1963
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q++ D DLDP ++ NP + F ID +G++
Sbjct: 1964 VTQISVHDVDLDPAFIFNFA-KESNPGTKFAIDRNTGAV 2001
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP- 62
+Y A + ENQ+ ++++ A D D + + ++I G F I D G +T
Sbjct: 1327 LYEASVKENQNPGEFVIRVEAMDRDSGINSKFQFEIMPGASSGLFKINPDTGEVVTTTTL 1386
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL 100
+V+ + + V++ ND+ P + P + +++ENQ G+
Sbjct: 1387 DREVQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEIIVPSHSIEVLENQEPGV- 1445
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ ASD D + + Y I GN + YF I+ SG L
Sbjct: 1446 -AYTILASDMDAGDNGAVRYHIIDGNTDEYFAINETSGDLS 1485
>gi|344265578|ref|XP_003404860.1| PREDICTED: protocadherin gamma-B3-like [Loxodonta africana]
Length = 818
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD + Y ++ + +D P V + + +VNDN P+
Sbjct: 406 TDGTLDREHMTEYNVTI----------MATDKGKPPLSSSTSVTLHIADVNDNAPVFQKA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN IVQ++A D DL + R+SY I A + E SY +++ SG
Sbjct: 456 SYMVHVAENNPPGASIVQVSAFDPDLGKNGRVSYSIVASDLEPGALSSYVSVNAQSG 512
>gi|17556871|ref|NP_498687.1| Protein CDH-3 [Caenorhabditis elegans]
gi|466085|sp|P34616.1|CADH3_CAEEL RecName: Full=Cadherin-3; Flags: Precursor
gi|351020800|emb|CCD62768.1| Protein CDH-3 [Caenorhabditis elegans]
Length = 3343
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+++ ++ E+ P++QL+ASD D + R +++ G F +D
Sbjct: 2149 IFHVEVPEDVRIGEPVIQLSASDADEHSNHR--FELDGGGEGIPFRVDENTGMVFVNDSL 2206
Query: 54 ---------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
I LT G + +++ V++VNDN P+ P Y EN + I Q
Sbjct: 2207 DFEKKQSYRIKVKLTDGAWLIETSLFVNVKDVNDNAPIFEKPEYLFISEENSA---EIGQ 2263
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D + + +I Y +++ YF I+ +G L
Sbjct: 2264 FHASDMDSENNGKIRYSVTS----PYFKIEPSTGVL 2295
>gi|348514361|ref|XP_003444709.1| PREDICTED: protocadherin alpha-1-like [Oreochromis niloticus]
Length = 593
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 41/157 (26%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------------------- 56
+LP+ A+D D + SYK+ P YF++D+ S
Sbjct: 141 LLPV----ANDADTGSNSVKSYKLG---PNEYFSLDVQSGGQHSESAELVLQKSLDREKK 193
Query: 57 --------DLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
L GG P L + + V ++NDN P+ +Y AQ+ EN IV ++
Sbjct: 194 SVIHLVLTALDGGKPPRSGTLKIIVHVMDINDNSPVFSQTLYKAQVSENAQFQTSIVTVS 253
Query: 107 ASDGDLDPDQRISYK-ISAGN--PESYFNIDIGSGSL 140
A+D D + I Y I GN PE+ F+I+ G+G +
Sbjct: 254 ATDLDEGINSEIVYSFIKRGNFKPEALFSINPGTGEI 290
>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
pisum]
Length = 5057
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI 71
++N +G++ I L LD + R SY + ++ + + + T V +
Sbjct: 1248 IDNGTGMITINAL------LDRETRASYMLRVTAHDNGTTVQLNASAT---------VTV 1292
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131
+V + NDN P P I EN + +V+ A+D DL + + Y I +GN F
Sbjct: 1293 EVLDDNDNPPKFESPPLGVSIYENATVNTELVRFRATDPDLGVNSEVRYSIVSGNRRDTF 1352
Query: 132 NIDIGSGSL 140
+IDI +G L
Sbjct: 1353 HIDIVTGVL 1361
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 24/143 (16%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------------ 58
I EN + +V+ A+D DL + + Y I +GN F+IDI + +
Sbjct: 1313 IYENATVNTELVRFRATDPDLGVNSEVRYSIVSGNRRDTFHIDIVTGVLYLHKRLDYEDI 1372
Query: 59 -----------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G P L ++ V + NDN P QI+EN IV +
Sbjct: 1373 SAYVLNISAYDNGNPRLSSALAFHVTVLDCNDNPPQFPSTAIVRQIIENLEPGTSIVHVV 1432
Query: 107 ASDGDLDPDQRISYKISAGNPES 129
A D D + + + Y I+ P++
Sbjct: 1433 ADDPDSELNGLVHYSITQQQPDN 1455
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 25/132 (18%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSDLTGG 61
A D D+ + R++Y++ P+S F I + +D
Sbjct: 906 AKDKDVGLNGRVTYRL-VSKPDSLFRITESSGIVYLHKPVYTAPGTVLAAEIMATDSGNP 964
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P +V +Q+VND+ P+ Y + + E + L A+DGD + R+SY
Sbjct: 965 PLSAKHVVLFTIQDVNDHTPVFDQTSYESSLSEATAVNSRFFGLTATDGDYGSNARLSYA 1024
Query: 122 ISAGNPESYFNI 133
I G+ E F I
Sbjct: 1025 IEEGDVEGNFGI 1036
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 39/172 (22%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
DP Y V EN + +VQL A+D D+ P+ I Y I+ G+ F+I
Sbjct: 2148 FDPRQYTSSVPENVTIGYTVVQLFATDKDVGPNAGIRYTITNGDENLDFSIADDTGLIRV 2207
Query: 54 ----------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ 91
+G D D+V +I I V ++NDN P+ D Y
Sbjct: 2208 AKYLNYERKSRYVLTIKAEDGPVGIDNRVNSDEVTVI--ITVLDINDNYPVFPDSPYTIH 2265
Query: 92 IVEN---QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++E +S P+ + A+D D + R+ Y + YF +D +G +
Sbjct: 2266 VLEEYIPESKEFPVAIVKATDADSGYNGRVRYYLK---DTEYFTVDSVNGKI 2314
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY----------------------FNIDIGSDL 58
+ L A D D D + + Y I++G+ +++ + ++IG+
Sbjct: 2063 VTVLKAVDDDEDKNGFVEYWINSGDEKTFTIGSIDGVLRVASSLDRETKSSYKLEIGAKD 2122
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQ 116
G P + + + + + NDN P+ DP Y V EN + +VQL A+D D+ P+
Sbjct: 2123 RGDPSLNSIMKLTVNILDENDNSPI-FDPRQYTSSVPENVTIGYTVVQLFATDKDVGPNA 2181
Query: 117 RISYKISAGNPESYFNI 133
I Y I+ G+ F+I
Sbjct: 2182 GIRYTITNGDENLDFSI 2198
>gi|322800569|gb|EFZ21555.1| hypothetical protein SINV_02724 [Solenopsis invicta]
Length = 171
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL--PIVQLAASDGDLDPDQRISYKISAG 125
IV ++V +VNDN P+ +P Y + G++ PI++L A+D D P I+Y+I++G
Sbjct: 19 IVRVEVTDVNDNRPI-FNPRQY-NVTLRSDGVMHDPILKLVATDLDDGP---IAYRITSG 73
Query: 126 NPESYFNIDIGSGSL 140
N F+ID +G L
Sbjct: 74 NEAGVFHIDRNTGEL 88
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 4 DPVYYAQIV-----ENQSGILPIVQLAASDGDLDPDQRISYKISAGN-PESYFNIDIGSD 57
DP +Y + EN IV++ A D D + ISY +S+ P+ N+D D
Sbjct: 536 DPKFYTSLFHETVPENVPVGHSIVRVQAYDADDGANAEISYTLSSSERPDLPLNVD---D 592
Query: 58 LTGGPDQVYLI---------------------------VYIQVQNVNDNVPMTLDPVYYA 90
+TG + + ++VQ+VNDN P+ Y A
Sbjct: 593 VTGWVSTTRQLDREESASFNFQVVARDHGTPSRSATASILLRVQDVNDNDPVFEPRTYEA 652
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ E P+V + AS D D R+ Y+I++GN F I
Sbjct: 653 TVSEADPPGTPVVSVTAS--DRDEHSRLVYQIASGNTRERFGI 693
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP------DQVYLIVYIQ 72
+ ++ A+D D + + Y + GN + +F +D GS P L+V +Q
Sbjct: 453 VARIRATDSDQGANAALRYSLIGGNTQGHFAMDSLTGSVTVLSPLDYESARSYRLVVRVQ 512
Query: 73 ----------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
V ++NDN P +++ + EN IV++ A D D +
Sbjct: 513 DGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVGHSIVRVQAYDADDGANA 572
Query: 117 RISYKISAGN-PESYFNIDIGSG 138
ISY +S+ P+ N+D +G
Sbjct: 573 EISYTLSSSERPDLPLNVDDVTG 595
>gi|126291026|ref|XP_001377912.1| PREDICTED: protocadherin gamma-B7-like [Monodelphis domestica]
Length = 864
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 27 SDGDLDPDQRISYKIS-----AGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81
+DG LD +Q Y I+ GNP Y LT + + ++NDN P
Sbjct: 406 TDGALDREQTPEYNITLTATDKGNPPLY----TSKTLT-----------LHIADINDNAP 450
Query: 82 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ L P Y A I EN + +++A D DLD + R+SY I
Sbjct: 451 IFLQPYYVAYIPENNPSGASVTRVSAYDPDLDENGRVSYFI 491
>gi|226069402|dbj|BAH36925.1| dachsous [Gryllus bimaculatus]
Length = 359
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y + + +Q+ NDN P P Y A + E + ++Q++A+D D D + R+ Y I G
Sbjct: 236 YAELVVHLQDQNDNAPRFTQPQYTATVWEGNNKGTFVIQVSATDADQDANARVLYHIVDG 295
Query: 126 NPESYFNID 134
N ++ F I+
Sbjct: 296 NHDNAFVIE 304
>gi|334331487|ref|XP_003341493.1| PREDICTED: protocadherin-7 isoform 3 [Monodelphis domestica]
Length = 1260
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 268 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 317
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--NPESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A N +D +G L
Sbjct: 318 EADLAENSTPGTPILQLRAADLDVGVNGQIEYVFGAATENVRRLLRLDETTGWL 371
>gi|395504774|ref|XP_003756722.1| PREDICTED: protocadherin gamma-B1-like [Sarcophilus harrisii]
Length = 806
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y I+ I D P I+ +Q+ +VNDN P+ L P
Sbjct: 400 TDGSLDREEIPEYNITL----------IAIDKGNPPLSTSKILTLQITDVNDNPPVFLQP 449
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
Y + EN + I ++A+D DL+ + R+SY I
Sbjct: 450 SYVVYVPENNPSGVSIACVSATDLDLEENGRVSYSI 485
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNP 127
+ I V +VNDN P+ VY + EN ++Q+ A+D D + I+Y IS P
Sbjct: 223 IRINVTDVNDNWPVFSQEVYRISLRENLPAGSSVLQVTATDQDEGNNAEITYSISTVETP 282
Query: 128 ESYFNIDIGSGSLG 141
+ F +D SG +
Sbjct: 283 KHLFRLDAKSGEIS 296
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-- 124
L+V I +Q+VNDN P+ Y A I EN + ++++ A+D D + + Y I+
Sbjct: 218 LLVNITIQDVNDNQPIFSQGNYVATIAENATVGTSVLRVLATDTDEGRNGEVRYSINRRQ 277
Query: 125 GNPESYFNIDIGSGSL 140
+ E YFNID SG +
Sbjct: 278 SDREQYFNIDPKSGEI 293
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+G P Y + + ++N NDN P Y A + E + +VQ++A D D + DQR+
Sbjct: 2111 SGEPRYGYARLEVNLRNENDNAPRFSQSSYEASVYEGRRRGESVVQVSAIDEDGE-DQRL 2169
Query: 119 SYKISAGNPESYFNID 134
++I GN ++ F ID
Sbjct: 2170 FFQIIDGNHDNAFTID 2185
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 27/132 (20%)
Query: 34 DQRISYKISAGNPESYFNIDIGS-------------------DLTGGPDQ------VYLI 68
D ++SY+I AGN F +D S L P + V +
Sbjct: 2471 DLKLSYEIFAGNEGGNFVVDFNSGTVFLAKKLDRELRNHYELKLVAYPFRQQTSVNVSTV 2530
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V +VND+ P+ + Y + E ++ + A D D D + ++Y I++GN
Sbjct: 2531 VHIEVVDVNDSPPVFIKNRYEISLSEYTKVGTSVLSVVAEDRDCDSE--VNYDITSGNEL 2588
Query: 129 SYFNIDIGSGSL 140
++F ID GS+
Sbjct: 2589 NHFAIDKLDGSI 2600
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDNVP + Y + EN+ I +L A+D DL + I Y I GN
Sbjct: 1700 VIVDVLDVNDNVPDFGESCYNLSVPENREWSF-IHRLHAADDDLGENGEIVYSIEEGNVG 1758
Query: 129 SYFNIDIGSGSL 140
+ F+I SG+L
Sbjct: 1759 NVFSIAPLSGNL 1770
>gi|334331489|ref|XP_001362207.2| PREDICTED: protocadherin-7 isoform 1 [Monodelphis domestica]
Length = 1252
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 268 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 317
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--NPESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A N +D +G L
Sbjct: 318 EADLAENSTPGTPILQLRAADLDVGVNGQIEYVFGAATENVRRLLRLDETTGWL 371
>gi|47225228|emb|CAG09728.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1210
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P +V I++++ NDNVP+ P I EN +++L+A+D D +
Sbjct: 407 VASDRGTPPLNTSAMVLIKIKDENDNVPIFPQPEIQLSIPENNDPSTQLIKLSATDADSE 466
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSLG 141
+ I Y + PE FN+D SG L
Sbjct: 467 HNAEIIYTLGPDAPEG-FNVDRRSGVLS 493
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY- 120
P I+ + + +VNDN P+ D + EN + QL A+D DL + +I +
Sbjct: 198 PKSSTAILQVTISDVNDNRPIFKDSELEVTVPENAPMGTSVAQLHATDADLGSNAQIHFT 257
Query: 121 ---KISAGNPESYFNIDIGSG 138
+ISAG + +F+ID +G
Sbjct: 258 FSNQISAGT-KRHFSIDGSTG 277
>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
Length = 801
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+D GS G QVY I+V +VNDN P P Y QI E+ +V+++A+D D
Sbjct: 216 LDGGSPPRSGTAQVY----IEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDAD 271
Query: 112 LDPDQRISYKISAGNPE--SYFNIDIGSGSL 140
+ ISY + + E F +D +G +
Sbjct: 272 TGVNGEISYSLFQASDEIGKTFKVDFLTGEI 302
>gi|431904132|gb|ELK09554.1| Cadherin-23 [Pteropus alecto]
Length = 724
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ +P Y + EN G +VQ+ A+D D+
Sbjct: 373 VASDRGTPPRKKDHILQVTILDINDNPPVIENPFGYNVSVNENVGGGTAVVQVRATDRDI 432
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 433 GINSVLSYYITEGNEDMTFRMDRVSGEIA 461
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----P 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D S P
Sbjct: 408 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRVSGEIATRPAPP 467
Query: 63 DQ-----VYLIV----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
D+ +L+V Y+ + + NDN P+ P Y + E I
Sbjct: 468 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTINA 527
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F++D +G
Sbjct: 528 SLITIQALDLDEGPNGTVTYAIVAGNIVNTFHMDRHTG 565
>gi|395736298|ref|XP_003776732.1| PREDICTED: protocadherin gamma-B5 [Pongo abelii]
Length = 818
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P I V + +++VNDN P+
Sbjct: 402 TDGTLDREQ---------TPE--YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQ 450
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q+ ASD DL + ++SY I AG+ E SY ++ SG
Sbjct: 451 ASYLVSVPENNPPGASIAQVCASDPDLGLNGQVSYSIMAGDLEPLALASYVSVSAQSG 508
>gi|344291677|ref|XP_003417560.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Loxodonta
africana]
Length = 2906
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
G + Y V + +Q+VNDN+P VY+A + E Q ++Q+ A+D D + + Y
Sbjct: 1755 GGQRAYSKVAVLIQDVNDNLPCFEKSVYHASVSEGQLYDAHVIQVFAADPDSGLNGLLEY 1814
Query: 121 KISAGNPESYFNIDIGSG 138
I +GN F ID SG
Sbjct: 1815 SILSGNQGDAFQIDALSG 1832
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P I+ I+V +VNDN P Y+ E+ I+ ++A+D D+
Sbjct: 2174 LASDHGCPPLSSTTIISIEVLDVNDNPPKFTHLEYHTHFKESTPLGTHIIVVSANDSDMG 2233
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Y + +GN +F+++ +G L
Sbjct: 2234 SNAEIMYHLISGNERGHFHLEEKTGVL 2260
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++VYI V ++NDN P + + +++E Q + + + A D D +
Sbjct: 808 PQNATMVVYISVTDINDNKPYFPQCLPGKELHIKVLEGQPVNMLVTTVFAKDLDEGNNGE 867
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y +S+G+ +F ID SG +
Sbjct: 868 VIYSVSSGDGSDHFKIDANSGEI 890
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1263 LYNASVKENQNPGEFVTRVEAMDRDSGINSKLQFEILPGASFGLFEINPDTGEVVTTTTL 1322
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P ++ V++ ND+ P + P + + EN+ +
Sbjct: 1323 DREXQEVFTLRVLVRDGGTPPLSSTTVILCTVEDENDHAPEFIVPWHDTDVPENREPEV- 1381
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I + ASD D + + Y I GN E YF ++ SG L
Sbjct: 1382 IYTVLASDMDAGNNGAVKYYIIDGNTEEYFAVNETSGELS 1421
>gi|119587286|gb|EAW66882.1| hCG1642212, isoform CRA_b [Homo sapiens]
Length = 1118
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
>gi|170032327|ref|XP_001844033.1| protocadherin gamma B4 [Culex quinquefasciatus]
gi|167872319|gb|EDS35702.1| protocadherin gamma B4 [Culex quinquefasciatus]
Length = 2020
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNI---------------DIGSDLT--------GGP 62
A D D + RISY +S NP+ F I D G+ LT G P
Sbjct: 1162 AKDLDSGANSRISYSLSY-NPQGLFRISETTGVLYLNRPVLVDPGTTLTLEITASDSGDP 1220
Query: 63 D-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
V + +++VND+ P+ Y ++E+ LAASD D+ +QRISY
Sbjct: 1221 QLSTKSSVTVTIEDVNDHTPVFDHTSYETSLLESMPVNSRFFALAASDADIGMNQRISYA 1280
Query: 122 ISAGNPESYFNI 133
I GN + F I
Sbjct: 1281 IIEGNVDRKFGI 1292
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+++ A+D DL + +I++ I+AGN F+ID I +
Sbjct: 1580 LIRFRATDMDLGVNSQITFSIAAGNRRDTFHIDPTSGYLYLHRLLDYEDTQSYSLNITAS 1639
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P I++ + V + NDN P + QI E PIV + A D D +
Sbjct: 1640 DGGNPRLSTTILFMVNVIDSNDNPPSFPNTAIVRQIREGIPLKTPIVTVTAEDPDSGLNG 1699
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+++Y+I++ +PE+ +F I+ +G
Sbjct: 1700 KVTYEIASQDPENRKRHFGINPTTG 1724
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + + N SG + + L + G LD + R SY ++I + G P
Sbjct: 420 DEKFRLAVTTNPSGDVYYLHLE-TIGKLDRETRGSY-----------TLNISAKDGGTPP 467
Query: 64 QV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ YL V + V +VNDN P+ Y + E+ P++Q+ ASD DL + +I+Y +
Sbjct: 468 KFGYLQVNVTVLDVNDNPPIFDHSDYIVSLNESVLPGTPVLQVMASDNDLGDNSKITYYL 527
Query: 123 SAGNPESYFNIDIGSG 138
S + E+ F +D +G
Sbjct: 528 S--DTETQFTVDPETG 541
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGN----------------------PESYFNIDIGSDLTGG 61
LAASD D+ +QRISY I GN Y+++ I G
Sbjct: 1264 LAASDADIGMNQRISYAIIEGNVDRKFGIFPDGFLYVKSALDREERDYYSLTITCTDEGD 1323
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + + V + V + NDN P + + + EN+ + +L A D D+ + + Y
Sbjct: 1324 PARSSSVPVIVHVIDENDNPPQFTNSTFIFSVAENEPADTFVGKLTAVDRDIGRNAELIY 1383
Query: 121 KISAGNPESYFNIDIGSG 138
+S+ + F ID +G
Sbjct: 1384 MLSSKQDD--FTIDSRNG 1399
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y QI E S ++++ +D D + + Y I+ GN + F ID + L D
Sbjct: 1460 YKVQISEGSSIGTQLIRVYTNDADEGLNGDVFYYIADGNGDERFVIDDATGQITLAKALD 1519
Query: 64 QVYLIVY----------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGIL- 100
+ + +Y I+V + ND+ P ++QI N++ +
Sbjct: 1520 RETVSMYKLTIVAHDASMQNRLSASTTVTIEVLDENDDAPEFTQT--HSQISINETTPIG 1577
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ A+D DL + +I++ I+AGN F+ID SG L
Sbjct: 1578 TELIRFRATDMDLGVNSQITFSIAAGNRRDTFHIDPTSGYL 1618
>gi|426345778|ref|XP_004040576.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Gorilla gorilla
gorilla]
Length = 2916
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P VY A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1768 RAYCKVAVLIQDENDNSPCFEQSVYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1827
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1828 SGNQEEAFQIDALSG 1842
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1791 VYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1850
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1851 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1909
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1910 VTHVSVHDVDLNSAFTFSFA-KESNPGTKFAIDQNTG 1945
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 812 TDRGSPPRNASMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 871
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 872 EGNNAEVTYSVSSADSSDHFKIDANSGEI 900
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2181 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2240
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2241 SHAEIIYNIISGNEKGHFYLEENTGVL 2267
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1273 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTTTIL 1332
Query: 60 -----------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + V++ ND+ P + Y +++ENQ +
Sbjct: 1333 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEV- 1391
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + ASD D ++ + Y I GN + YF I+ SG L
Sbjct: 1392 VYTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGDLS 1431
>gi|344265584|ref|XP_003404863.1| PREDICTED: protocadherin gamma-B4-like [Loxodonta africana]
Length = 790
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P I V + V +VNDN P+
Sbjct: 404 TDGVLDREQ---------TPE--YNVTITATDKGKPPLSSSISVTLHVGDVNDNAPVFHQ 452
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY +++ SG
Sbjct: 453 ASYVVHVAENNPPGASIAQVSASDPDLGPNGLVSYAIVASDLEPRALSSYVSVNAQSG 510
>gi|307194559|gb|EFN76851.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 1801
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+++V + NDNVP +D ++E +++ A+D DL + +S+ ISAGN +
Sbjct: 1334 VHVEVLDENDNVPRFVDNRPKIAVLETAPINTELLRFKATDNDLGLNSELSFAISAGNRK 1393
Query: 129 SYFNIDIGSGSL 140
F ID SG+L
Sbjct: 1394 DTFYIDPLSGTL 1405
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
D + Q+ +N +G + L + G LD +Q Y++++I + G P
Sbjct: 202 DGKFRLQVTDNPTGETSYLHLETT-GKLDREQ-----------VEYYSLNICARDRGQPP 249
Query: 64 QV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
++ YL+V + V +VNDN P+ Y + E+ ++ + A+D D + + +++Y +
Sbjct: 250 RLGYLLVNVTVLDVNDNPPVFQQSDYVVSLNESAPIGTKVLAVHATDKDSEDNSKLTYYL 309
Query: 123 SAGNPESYFNIDIGSGSL 140
+ E F ID +G++
Sbjct: 310 P--DNERKFTIDPETGTI 325
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 50 FNIDIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+N+ I + G P + YL+ I V +VND+ P+ Y A + E + ++
Sbjct: 465 YNLTIVATDKGTPSRSTTAYLV--IHVNDVNDHEPVFQRSEYSAVLSELSPIGSFVASIS 522
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A+D D + +I Y+ + GN + +F ID +G
Sbjct: 523 ATDADSGVNAKIHYEFAKGNEQHWFAIDGNTG 554
>gi|334331485|ref|XP_003341492.1| PREDICTED: protocadherin-7 isoform 2 [Monodelphis domestica]
Length = 1073
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 268 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 317
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--NPESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A N +D +G L
Sbjct: 318 EADLAENSTPGTPILQLRAADLDVGVNGQIEYVFGAATENVRRLLRLDETTGWL 371
>gi|386118335|gb|AFI99115.1| fat protocadherin, partial [Clytia hemisphaerica]
Length = 3015
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+YF + + + G + VYI V+N+NDN P +I EN ++Q+ A
Sbjct: 1208 TYFKLLVKARADNG-ESTNAFVYIHVRNINDNKPRFDPSTITVKISENTPVHSRVIQVKA 1266
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D +++YKI+ G+ E F ID SG
Sbjct: 1267 RDVDDPYGDQLTYKINNGDAEGMFLIDESSG 1297
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++ +++VNDN P ++ + EN S + I Q+ A+D D +++++Y I N +
Sbjct: 1531 IFLNLRDVNDNRPSFDQDLHTTTVRENTSQSVVIAQVRATDLDSYDNRKLTYSIIKNNEQ 1590
Query: 129 SYFNID 134
F ID
Sbjct: 1591 RIFAID 1596
>gi|426370103|ref|XP_004052012.1| PREDICTED: protocadherin Fat 3-like [Gorilla gorilla gorilla]
Length = 969
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 595 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 654
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 655 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 714
Query: 117 RISYKI 122
++Y +
Sbjct: 715 EVTYSV 720
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN PM +P+Y + I+E+ ++Q++ASD D+ + RI Y +S + E
Sbjct: 987 VEISVTDVNDNAPMFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKYLLSDRDVE 1046
Query: 129 -SYFNIDIGSGSL 140
F ID SG++
Sbjct: 1047 DGSFVIDPTSGTI 1059
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I VQ+VNDN P +P YY A + E+Q P+ + A+D D D R+ Y+IS GN
Sbjct: 774 VVITVQDVNDNDP-NFNPKYYEANVGEDQPPGTPVTTVTATDP--DEDSRLHYEISTGNT 830
Query: 128 ESYFNIDIGSG 138
F I +G
Sbjct: 831 RGRFAITSQNG 841
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 15 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYI 71
Q+ +PI ++ + G + + + S +SY + SD+ + V +
Sbjct: 508 QTQEMPIFRIDSRSGVISTRSSLDRETS----DSYNLVVTASDMASAQSERKTATASVLV 563
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGIL---PIVQLAASDGDLDPDQRISYKISAGNPE 128
+V + NDN P + Y Q+ E+Q G + + A+D D + I Y I GN +
Sbjct: 564 KVLDDNDNYPQFSERTYTVQVPEDQWGSSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQ 623
Query: 129 SYFNIDIGSG 138
S F+ID SG
Sbjct: 624 SQFSIDSMSG 633
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
+P YY A + E+Q P+ + A+D D D R+ Y+IS GN F I
Sbjct: 788 FNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEISTGNTRGRFAITSQNGRGLI 845
Query: 54 -IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I L ++ +L+ V+I + + N+ P+ + Y + + E+
Sbjct: 846 TIAQSLDYKQEKRFLLTVTATDSGGRSDTATVHINITDANNFAPIFENAPYSSSVFEDAP 905
Query: 98 GILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 906 VGTTVLVVSATDSDVGINAQITYSL 930
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 44 GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PE+ F ++I + G P L + + + +VND+ P+ Y ++E
Sbjct: 837 AEPETVFYVEIMATDGGNPPLSSRLSLPVHIADVNDHTPVFDHTSYETSLLETTKVNTRF 896
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
LAASD DL + RISY+I GN + F +
Sbjct: 897 FALAASDSDLGANGRISYEIIDGNADRKFGV 927
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----- 56
P+ Y IV EN+ I+ ++A+D D P+ + Y I GN FN++ +
Sbjct: 3081 FKPLSYQVIVPENEPIGSTILTVSATDKDNGPNGMLHYNIVDGNDSENFNVNKHTGAITI 3140
Query: 57 -------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
DL P +V I + +VNDN P+ Y+ I EN+
Sbjct: 3141 MQPLDYDQMQEYHLNISVTDLGYKPLSAVAMVTIILTDVNDNPPLFNQSEYHGYIEENKP 3200
Query: 98 GILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDIGSGSL 140
+ Q A+D D + I Y +S G +F I+ +G++
Sbjct: 3201 SGTIVFQAHATDKDSAKNAIIHYLFLSIGTDHHFFTINASNGTV 3244
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPESYFNIDI--GSDLTGG-- 61
Y+ I EN+ + Q A+D D + I Y +S G +F I+ G+ L+
Sbjct: 3191 YHGYIEENKPSGTIVFQAHATDKDSAKNAIIHYLFLSIGTDHHFFTINASNGTVLSAASF 3250
Query: 62 ----------------PDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD + Y I+++ + VN+ P + PV++ + E + +
Sbjct: 3251 DYEERRSYTLHIKAKNPDSIMESYAILHVHILGVNEFYPQFVQPVFHFDVSETSAVGTAV 3310
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D+ D RI Y + + + F I+ +G L
Sbjct: 3311 GSVQATDKDIGEDGRIYYLLVGSSNDRGFGINTNTGLL 3348
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 28/163 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID-------- 53
+D Y + I+E+ + + A D D+ P + +Y I GN + F ID
Sbjct: 3398 VDRFYTSTILESAPVGSVVTTVKAIDKDVRPQNNHFTYSIINGNLKQSFKIDAESGEITT 3457
Query: 54 ---------------IGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
IG+ TG P Q V I + ++NDN P I EN+
Sbjct: 3458 AALLDREDIAHYNLVIGAIDTGLPPQTGTATVRINLDDINDNGPTFTSEGLIGYIPENEP 3517
Query: 98 GILPIVQLAASDGDLDPDQR--ISYKISAGNPESYFNIDIGSG 138
I+ L A+D DL P+ SYKI G +S+ +D +G
Sbjct: 3518 AGTSIMTLTATDPDL-PENGPPFSYKIVGGRHKSWLTVDKYTG 3559
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES------------------ 48
Y ++E LAASD DL + RISY+I GN +
Sbjct: 882 YETSLLETTKVNTRFFALAASDSDLGANGRISYEIIDGNADRKFGVFPDGFLFVRAPLDR 941
Query: 49 ----YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
Y+ + + G P + ++ + I V + NDN P + + I EN +
Sbjct: 942 EERDYYALTVSCSDAGVPSRSSVVPIVIHVIDENDNPPHFTNSTFTFNIPENAPPDTFVG 1001
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+L A D D+ + +SY + + + + F ID+ +G
Sbjct: 1002 KLTAVDRDIGRNAELSYSVLSQSQD--FKIDMHNG 1034
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 48 SYFNIDIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S +N+ + + G P++ +LI I V +VND+ P+ Y A + E +
Sbjct: 342 SKYNLTVVATDKGTPERKSIAHLI--INVNDVNDHEPVFEKSEYSAVLSELAPTGTFVAS 399
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+AA+D D + ++ Y+I GN +FNID +G
Sbjct: 400 IAATDEDTGVNAQVYYEILTGNELKWFNIDTTTG 433
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 28/156 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
++E +++ ASD D + ++ + I+AGN F+ID
Sbjct: 1224 VLETSPSGTELMRFRASDADQGVNSQVVFSITAGNRRDTFHIDSISGSLYLHKSLDYEDI 1283
Query: 54 -------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
SD P ++ + V + NDN P+ QI E + PIV +
Sbjct: 1284 TSYTLNITASDCGTPPLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIALKTPIVTVT 1343
Query: 107 ASDGDLDPDQRISYKISAGNPE----SYFNIDIGSG 138
A D D + +++Y I+ PE +F I+ +G
Sbjct: 1344 ADDPDSGLNGKVTYVITKQEPEMSGGRHFGINTQTG 1379
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+D + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 79 VDNKFRLVTTTNPSGDTSYLHLETT-GNLDRESRGSYQL-----------NISASDGGTP 126
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
++ +L V + + +VNDN P+ Y + E P++Q+ ASD DL + +++Y
Sbjct: 127 PRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNETVLPGSPVLQVMASDNDLGDNSKLTYY 186
Query: 122 ISAGNPESYFNIDIGSG 138
+S E+ F +D +G
Sbjct: 187 LS--ETETQFTVDPETG 201
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 25/145 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLIV---- 69
I+ + D D + + Y ++AGN + F++D + L +++ +V
Sbjct: 1128 IMHVFTQDADEGLNGDVYYSLAAGNEANLFSLDSATGLLTLAHRLDRESQEIHRLVVVAK 1187
Query: 70 --------------YIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
I V + NDN P ++E +++ ASD D +
Sbjct: 1188 DAALKNPLKSTANITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGVN 1247
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
++ + I+AGN F+ID SGSL
Sbjct: 1248 SQVVFSITAGNRRDTFHIDSISGSL 1272
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 20 PIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNV 76
PI + + G++ +I YK S +PE+ F++ I + G P +V I + +
Sbjct: 2909 PIFSVDPATGEIFTKTQIQYKHSQYISSPENMFSLTILATDNGKPPLYTECLVNINIVDA 2968
Query: 77 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG-DLDPDQRISYKISAGNPESYFNIDI 135
N+N P Y + + EN +V++ A+D D+ + I Y + + N +YF+++
Sbjct: 2969 NNNPPKFAQAEYLSPLPENAGAGQRVVKVHANDDYDVGVNAEIDYTLVSSNLSAYFSLNK 3028
Query: 136 GSGSL 140
G L
Sbjct: 3029 HDGWL 3033
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTG 60
+ VY I EN + ++ A D DL + ++SY + + F+++ + LT
Sbjct: 1769 ETVYSFDIPENAPRGYQVGEILAKDADLAQNAQVSYAVVSDWANDVFSLNPQTGALTLTA 1828
Query: 61 GPD----QVYLI-----------------VYIQVQNVNDNVPMTLDPV-YYAQIVENQSG 98
D Q Y++ VY V ++NDN P+ DP+ Y ++I EN
Sbjct: 1829 KLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNTPL-FDPMSYSSEIFENVPI 1887
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ +V ++A D D + I + I+AG+ + F I
Sbjct: 1888 GMEVVTVSAKDIDSGKNGLIEFSITAGDDNNDFEI 1922
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASDGDLDPDQRISYKIS 123
IV ++VQ++NDN P+ Y+A + EN LPI L A+D D+ + +I + +
Sbjct: 2327 IVKVEVQDINDNGPVFELQYYHATVQEN----LPIGSLVLKPVATDKDVGLNAKIRFNL- 2381
Query: 124 AGNPESYFNIDIGSGSL 140
G ++F+ID +G +
Sbjct: 2382 LGEHMNHFHIDTDTGEI 2398
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I++ + NDN+P+ DP Y A + EN S ++Q++A+D D + R+ Y I +G+
Sbjct: 2115 IKILDENDNIPV-FDPKQYSASVAENASIGAMVLQVSATDMDEGDNGRVRYSIVSGDQNR 2173
Query: 130 YFNIDIGSG 138
F+I +G
Sbjct: 2174 DFSISEDTG 2182
>gi|405951091|gb|EKC19034.1| Cadherin-23 [Crassostrea gigas]
Length = 1838
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN--------------------- 45
Y AQI EN +L A+D D +I+Y + GN
Sbjct: 429 YSAQIAENSPTGTTFARLQATDLDSGVFGKITYSVRGGNGRFGINDSTGDIYNTEALDRE 488
Query: 46 --PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
E Y ++ GG + + + ++V + NDN P+ Y+A + E + + +
Sbjct: 489 KISEYYITVEAKD---GGGFRTTVELNVKVTDTNDNKPLFTREAYFASLKEGATSFVREL 545
Query: 104 QLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSLG 141
+L A+D D + ++ Y IS P + F ID +G +G
Sbjct: 546 KLEATDLDEGMNSQVLYSISNIQPPVTNTFTIDDATGVVG 585
>gi|94369682|ref|XP_143371.6| PREDICTED: similar to cadherin protein [Mus musculus]
Length = 2842
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + V + +Q+ NDN P VY A + E Q + ++Q++A+D D + +I Y I
Sbjct: 1697 QAFTQVTVAIQDWNDNPPRFAQSVYQASVSEGQFYSVHVIQVSATDLDQGLNSQIEYSIV 1756
Query: 124 AGNPESYFNID 134
+GN F ID
Sbjct: 1757 SGNQAGAFRID 1767
>gi|348514383|ref|XP_003444720.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 1598
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 58 LTGGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
+ GG Q+ + +++ V + NDN P P+Y A++ EN + ++ASD D+ +
Sbjct: 710 MDGGEPQMSGTMQIFVTVLDANDNAPTFAKPLYRAKLQENSPKGTSVTTVSASDKDIGSN 769
Query: 116 QRISYKISAGNP--ESYFNIDIGSGSL 140
+SY IS FNI++ +G +
Sbjct: 770 GELSYLISTSKRIVSELFNINLKTGEI 796
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+D DLD ++ S +NI + G P + + +Q+ +VNDN P+
Sbjct: 1389 TDSDLDRERT-----------SEYNIIVTCSDEGVPSLSSSVTLTLQISDVNDNAPVFER 1437
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
Y A IVEN + L I + A+D D + + R+SY
Sbjct: 1438 SSYEAYIVENNTPGLSIFTVKATDADWNQNARVSY 1472
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+D DLD ++ S +NI + G P + + +Q+ +VNDN P+
Sbjct: 401 TDSDLDRER-----------ASNYNITVTCSDEGVPSLSSSVTLTLQISDVNDNEPVFER 449
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
Y A IVEN + L I + A+D D + + R+SY
Sbjct: 450 SSYEAYIVENNTPGLSIFTVKATDADWNQNARVSY 484
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
++I V + NDN P+ Y A + EN + ++ASD D + RI Y I S
Sbjct: 1211 IFITVLDANDNAPVFTQSTYTATVFENAPEGTVVTSVSASDADHGSNGRIKYSITNSLDQ 1270
Query: 127 PESYFNIDIGSGSL 140
+ F I SG +
Sbjct: 1271 AHALFQIHEESGEI 1284
>gi|291387512|ref|XP_002710182.1| PREDICTED: protocadherin gamma subfamily B, 7 [Oryctolagus
cuniculus]
Length = 807
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE FN+ I + G P V +++ +VNDN P+
Sbjct: 406 TDGTLDREQ---------TPE--FNVTIKATDGGQPPLSSSSTVTLRIGDVNDNAPVFHQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD D+ P+ ++SY I A + E SY ++ SG
Sbjct: 455 AAYVVHVPENNPPGASIAQVSASDPDVGPNGQVSYSIVASDLEPRALSSYVSVSAHSG 512
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---DQVYLIVYIQVQ 74
IL ++ S G + QR+ ++ A F + + + G P D+ Y V I V
Sbjct: 902 ILNAFEIEPSTGAIKTKQRLDHEAQAS-----FAVSVTATDHGVPSKFDESY--VDIIVN 954
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNI 133
+VNDN P+ L Y + E+ S + Q++A+D D + +I Y + G N E F I
Sbjct: 955 DVNDNAPVFLLESYSGSVREDCSRGTSVTQISATDADSGTNGQIRYTFTGGDNGEDAFVI 1014
Query: 134 DIGSG 138
D SG
Sbjct: 1015 DERSG 1019
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY-LIVYIQ 72
N SG Q++ DG + + + + +A + +++ + G P + ++V I
Sbjct: 484 NPSGTNTAFQISRRDGVITTTEALDRETTAS-----YRLEVRASDQGTPPRTSDVVVTIT 538
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
V + NDN P Y + EN I +AA+D D + +I Y + GN + +F
Sbjct: 539 VLDENDNEPQFEQQSYAKDVPENVRPDTVIQTVAATDPDEGTNSQIRYSLIGGNSQGHFT 598
Query: 133 IDIGSGSL 140
ID +G +
Sbjct: 599 IDSATGDI 606
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGSDL------- 58
Y + E+ S + Q++A+D D + +I Y + G N E F ID S +
Sbjct: 968 YSGSVREDCSRGTSVTQISATDADSGTNGQIRYTFTGGDNGEDAFVIDERSGIIRTDKRL 1027
Query: 59 ----------------TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P+Q + + + +++VNDN P + EN+
Sbjct: 1028 DRELIPVYNLVAYAEDQGQPEQKTPVDIIVTIEDVNDNAPQFPSDTIDIYVPENRVVGSV 1087
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D + + Y I+ GN F +DI SG L
Sbjct: 1088 VARITANDPDEGQNAEVMYYITKGNNPELFQLDIFSGEL 1126
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I VQ+VNDN P + +P YY A + E+Q P+ + A+D D D R+ Y+IS GN
Sbjct: 780 VVITVQDVNDNDP-SFNPKYYEANVGEDQPPGTPVTTVTATDP--DEDSRLHYEISTGNT 836
Query: 128 ESYFNIDIGSG 138
F I +G
Sbjct: 837 RGRFAITSQNG 847
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P +P+Y + I+E+ ++Q++ASD D+ + RI Y +S + E
Sbjct: 993 VEISVTDVNDNAPAFKNPLYQSSILEDALVGTSVIQVSASDPDIGLNGRIKYLLSDRDVE 1052
Query: 129 -SYFNIDIGSGSL 140
F ID SG++
Sbjct: 1053 DGSFVIDPTSGTI 1065
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 7 YYAQIVENQSGI-----LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
Y + V + SG+ LPI ++ + G + + + S +SY + SD+
Sbjct: 503 YGIETVTDGSGVAQDQELPIFRIDSRSGVISTRSSLDRETS----DSYHLLVTASDMAAA 558
Query: 62 PDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQR 117
+ V +++ + NDN P + Y Q+ E+Q G + + A+D D +
Sbjct: 559 QSERKTATASVLVKILDDNDNYPQFSERTYTVQVPEDQWGDDNNVAHIRATDADQGNNAA 618
Query: 118 ISYKISAGNPESYFNIDIGSG 138
I Y I GN +S F+ID SG
Sbjct: 619 IRYAIIGGNTQSQFSIDSMSG 639
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
+ +P YY A + E+Q P+ + A+D D D R+ Y+IS GN F I
Sbjct: 793 SFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEISTGNTRGRFAITSQNGRGL 850
Query: 54 --IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 851 ITIAQSLDYKQEKRFLLTVTATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDA 910
Query: 97 SGILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 911 PVGTTVLVVSATDSDVGINAQITYSL 936
>gi|291387514|ref|XP_002710183.1| PREDICTED: protocadherin gamma subfamily A, 12 [Oryctolagus
cuniculus]
Length = 1886
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ I +D P V +++ +VNDN P+
Sbjct: 406 TDGTLDREQTSEYNVTI----------IATDGGQPPLSSSSTVTLRIGDVNDNAPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD D+ P+ ++SY I A + E SY ++ SG
Sbjct: 456 AYVVHVPENNPPGASIAQVSASDPDVGPNGQVSYSIVASDLEPRALSSYVSVSAHSG 512
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + V + + +VNDN P+ Y + EN I Q++ASD D+ P+ ++SY
Sbjct: 1605 PFSASVSVTVHISDVNDNAPVFHQAAYVVHVPENNPPGASIAQVSASDPDVGPNGQVSYS 1664
Query: 122 ISAGNPE-----SYFNIDIGSG 138
I A + E SY ++ SG
Sbjct: 1665 IVASDLEPRALSSYVSVSAHSG 1686
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+D LD +Q SY I+ +D P + ++V + NDN P
Sbjct: 1204 TDAVLDREQVPSYNITV----------TATDRGSPPLSTETHIALEVADTNDNPPAFPQD 1253
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
Y A + EN +V + A D D D + +I+Y ++ P+ SY +I+ +G L
Sbjct: 1254 SYSAHVPENNPRGASLVSVTARDPDCDENAQITYSLAEKTPQGVPVSSYVSINSDTGVL 1312
>gi|449267558|gb|EMC78488.1| Protocadherin-16, partial [Columba livia]
Length = 297
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 49 YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++N+ + + G P + + V I V++VNDN P+ Y + E+ ++++ A
Sbjct: 14 FYNLTVAASDRGLPQRSATVPVLITVRDVNDNPPVFTRAEYRTAVSESAPPGTELLRVVA 73
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P + Y IS+G+ F + +G+L
Sbjct: 74 HDADSGPRGHVRYTISSGDQHGLFQLHESTGAL 106
>gi|262263223|tpg|DAA06600.1| TPA_inf: protocadherin gamma b2 isoform [Anolis carolinensis]
Length = 940
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y I+ I D P + + I + ++NDN P P
Sbjct: 408 TDGSLDRERVPEYNITI----------IAMDKGTPPLSTHKTISIMISDINDNPPAFEKP 457
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
+ A I+EN + + + ASD DLD + +I+Y + + E SY +I+ +G++
Sbjct: 458 SFTAYILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSETGTI 516
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--A 124
L + + V ++NDN P+ +Y + EN + ++Q+ ASD D + I+Y S A
Sbjct: 228 LNIRVNVTDINDNAPVFSQAIYKVSLKENAPIGMSVLQVKASDSDEGSNAEITYTFSDIA 287
Query: 125 GNPESYFNIDIGSGSL 140
E F +D G +
Sbjct: 288 EKGEQKFTLDPKDGKI 303
>gi|397504069|ref|XP_003822631.1| PREDICTED: protocadherin-23-like [Pan paniscus]
Length = 2770
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P VY A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1622 RAYCKVAVLIQDENDNSPCFEQSVYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1681
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1682 SGNQEEAFQIDALSG 1696
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1645 VYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1704
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1705 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1763
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1764 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1799
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 666 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 725
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 726 EGNNAEVTYSVSSEDSSDHFKIDANSGEI 754
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2035 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2094
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2095 SHAEIIYNIISGNEKGHFYLEENTGVL 2121
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I VQ+VNDN P + +P YY A + E+Q P+ + A+D D D R+ Y+IS GN
Sbjct: 777 VVITVQDVNDNDP-SFNPKYYEANVGEDQPPGTPVTTVTATDP--DEDSRLHYEISTGNT 833
Query: 128 ESYFNIDIGSG 138
F I +G
Sbjct: 834 RGRFAITSQNG 844
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P +P+Y A I+E+ ++Q++ASD D+ + RI Y +S + E
Sbjct: 990 VEISVTDVNDNAPAFKNPLYQASILEDALVGTSVIQVSASDPDIGLNGRIKYLLSDRDVE 1049
Query: 129 -SYFNIDIGSGSL 140
F ID SG++
Sbjct: 1050 DGSFVIDPTSGTI 1062
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQN 75
+PI ++ + G + + + S +SY + SD+ + V +++ +
Sbjct: 517 MPIFRIDSRSGVISTRSSLDREAS----DSYHLLVTASDMAAAQSERKTATASVMVKILD 572
Query: 76 VNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
NDN P + Y Q+ E+Q G + + A+D D + I Y I GN +S F+ID
Sbjct: 573 DNDNYPQFSERTYTVQVPEDQWGDDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID 632
Query: 135 IGSG 138
SG
Sbjct: 633 SMSG 636
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 2 TLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------- 53
+ +P YY A + E+Q P+ + A+D D D R+ Y+IS GN F I
Sbjct: 790 SFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEISTGNTRGRFAITSQNGRGL 847
Query: 54 --IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 848 ITIAQPLDYKQEKRFLLTVTATDSGGRSDTATVHINITDANNFAPIFENAPYSAPVFEDA 907
Query: 97 SGILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 908 PVGTTVLVVSATDSDVGINAQITYSL 933
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y + EN+ I+ ++A D D P+ + Y I AGN + F ++
Sbjct: 3171 PSYQVIVPENEPIGSTILTVSAPDNDDGPNGMVRYAILAGNERNDFMVNSVTGAVSIRNP 3230
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
DL P + +V I + ++NDN P VY A + EN
Sbjct: 3231 LDYDLIQVYQLNITAEDLGYKPKRSIAMVTITLTDINDNAPYFNQSVYDAYVAENSPANT 3290
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A D D + I+Y I G+ F I+ +G
Sbjct: 3291 FVYRAQAHDRDSPKNAIINYAIVGGSGRELFAIETATG 3328
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 31/162 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG------ 60
Y QI E S +V++ D D + + Y IS GN F ID D TG
Sbjct: 1220 YRVQISEGASIGTQLVRVYTHDADEGLNGDVFYYISEGNRAERFAID---DSTGQITLAR 1276
Query: 61 ------------------GPDQVYL----IVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
Q L V I+V + ND+ P + IVE
Sbjct: 1277 ALDRETTASYRLTVVAHDASKQHRLSASTTVTIEVLDENDDAPEFTQTLSQIAIVETTPI 1336
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ A+D DL + +I++ I+AGN F+ID SG+L
Sbjct: 1337 GTELMRFRATDLDLGANAQIAFSIAAGNRRDTFHIDALSGAL 1378
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 40/174 (22%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------I 54
DP Y A I EN S ++Q++A+D D + R+ + I+AG+ F I +
Sbjct: 2208 FDPKQYSAAIAENASIGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSGVVRV 2267
Query: 55 GSDLTGGPDQVYLI----------------------VYIQVQNVNDNVPMTLDPVYYAQI 92
+L +Y I + I + ++NDN P LD Y A +
Sbjct: 2268 AKNLNFERKSLYAITVRAEDCAGDTENGEVRFDTARLSITITDINDNPPTFLDSPYLAYV 2327
Query: 93 VENQSGILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
+EN ++P ++ + A D D P + ++ Y + G+ + +F I+ +G +
Sbjct: 2328 MEN---VIPPNNGYVITVRAYDADTPPFNSQVRYFLKEGDTD-FFKINASTGEI 2377
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGS-------- 56
+Y A + E ++ + A D D+ P + + S+ I GN + F ID S
Sbjct: 3487 LYEASVSEGDPIGTKVIVVKAVDKDVRPQNNQFSFSIIGGNNDHSFKIDPQSGQIETARK 3546
Query: 57 -DLTGGPDQVYL---------------IVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGI 99
D P L +V I V ++NDN P T DP ++EN+
Sbjct: 3547 LDRETVPTHKLLLGAIDTGTPPQTGTTVVRITVTDINDNGP-TFDPKDTIGAVLENEPPN 3605
Query: 100 LPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNIDIGSGSL 140
++ LAA+D DL P+ +Y++ G +S F ++ SG L
Sbjct: 3606 TVVMTLAATDPDLPPNGAPFTYQLVGGRHKSLFTLERHSGVL 3647
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD + + SY+++ I D P + I V + NDN P+ DP
Sbjct: 2164 GQLDREAKPSYELNV----------IAKDRGDPPRMTQSRIRINVLDENDNSPI-FDPKQ 2212
Query: 89 Y-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Y A I EN S ++Q++A+D D + R+ + I+AG+ F I SG
Sbjct: 2213 YSAAIAENASIGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSG 2263
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
L + + V + NDN P+ P+Y A+++E +S + +++ASD D + + +I+Y++
Sbjct: 2729 LQLIVNVTDANDNAPVMDRPMYVAEVLEEESPSQLVTKVSASDADSEENGQITYRLRDDF 2788
Query: 127 PESYFNIDIG 136
N D G
Sbjct: 2789 ESFEINTDTG 2798
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------------- 53
IVE +++ A+D DL + +I++ I+AGN F+ID
Sbjct: 1330 IVETTPIGTELMRFRATDLDLGANAQIAFSIAAGNRRDTFHIDALSGALYLHRALDYEDT 1389
Query: 54 ------IGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
I + G P I++ + V + NDN P + QI E PIV +
Sbjct: 1390 QSYSLNISAADGGNPRLATTILFAVNVIDANDNPPAFPNTAIVRQIREGIPLNTPIVTVT 1449
Query: 107 ASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSG 138
A D D + ++ Y+I+ +P E +F I+ +G
Sbjct: 1450 AEDPDSGLNGKVRYEIAHQDPQDGDGERHFGINPTTG 1486
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
L VY V ++NDN P+ DP+ Y+ +I EN +V ++A+D D + RI Y I+AG
Sbjct: 1945 LTVYCNVVDLNDNAPI-FDPMSYSNEIFENAPINSDVVTVSATDIDSGSNGRIEYSITAG 2003
Query: 126 NPESYFNI 133
+ F I
Sbjct: 2004 DDNEDFQI 2011
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 74 QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++VND+ P+ Y ++E+ LAASD D+ P+ RISY I GN + F I
Sbjct: 979 EDVNDHTPVFDHTSYETSLLESMPVNSRFFALAASDADVGPNGRISYAIVEGNVDGKFGI 1038
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+V + V+I +VNDN P+ + Y QI E S +V++ D D + + Y I
Sbjct: 1197 DRVKIKVFIT--DVNDNAPVFVRAPYRVQISEGASIGTQLVRVYTHDADEGLNGDVFYYI 1254
Query: 123 SAGNPESYFNIDIGSGSL 140
S GN F ID +G +
Sbjct: 1255 SEGNRAERFAIDDSTGQI 1272
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 49 YFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++ ++I + G P + YL V + + +VNDN P+ Y + E+ P++Q+ A
Sbjct: 187 FYALNISARDGGEPARYGYLRVNVTILDVNDNPPIFDHSDYIVSLNESVLPGTPVLQVMA 246
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
SD DL + +I+Y ++ + E+ F +D +G
Sbjct: 247 SDSDLGDNSKITYYLA--DAETQFTVDPETG 275
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 34/166 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDG-DLDPDQRISYKISAGNPESYFNID-------IG-- 55
Y A + E L I+QL A D D + I Y++ GN F I+ +G
Sbjct: 3063 AYMAPVPEGADVGLRILQLTARDELDFGVNAEIEYQLIGGNGSDRFAINKLDGWIVVGRK 3122
Query: 56 -SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ---------- 104
S++ P V+++ QV+ V+ VP D V IV + P+ Q
Sbjct: 3123 LSEVAASPGTVFVL---QVRAVDRGVPPQQDEVSVTLIVTGANRFAPVFQSPSYQVIVPE 3179
Query: 105 ----------LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++A D D P+ + Y I AGN + F ++ +G++
Sbjct: 3180 NEPIGSTILTVSAPDNDDGPNGMVRYAILAGNERNDFMVNSVTGAV 3225
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + VQ++ND+ P Y A I ENQ ++ A+D D + +I Y + G
Sbjct: 2411 VRVMVQDINDHNPEFERQSYQATIAENQPIGTRVLWPRATDRDAGLNAKIRYTL-LGEHS 2469
Query: 129 SYFNIDIGSGSL 140
S F +D SG +
Sbjct: 2470 SRFRLDASSGEI 2481
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+ + A+D D + +I Y AGN + +F ID S L
Sbjct: 466 VASITATDEDTGVNAQIFYDFVAGNRDQWFRIDPASGLITTRAPLDREVLGHVELSISAR 525
Query: 60 -GGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GGP+ + ++V + ND P P+ + E +V LAA D D +
Sbjct: 526 DGGPNPKWAHTQLKVTILDENDEAPAFAQPLLNVTLSETAPPRTVVVSLAAVDHDQGTNG 585
Query: 117 RISYKISAGNPESY---FNIDIGSGSLG 141
I+Y +Y F +D SG +
Sbjct: 586 SITYSFHPSVERNYPGTFELDALSGQIA 613
>gi|410948503|ref|XP_003980978.1| PREDICTED: protocadherin gamma-B3 [Felis catus]
Length = 820
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +NI I G P V + + +VNDN P+
Sbjct: 406 TDGALDREQ---------TPE--YNITITVTDRGRPALSSNRSVILNIADVNDNAPVFHQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ R+SY I A + E SY ++ SG
Sbjct: 455 GSYVVHVAENNPPGASIFQVSASDPDLGPNGRVSYSIVASDLEPRALASYVSVSAQSG 512
>gi|327270413|ref|XP_003219984.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 830
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y I+ I D P + + I + ++NDN P P
Sbjct: 408 TDGSLDRERVPEYNITI----------IAMDKGTPPLSTHKTISIMISDINDNPPAFEKP 457
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
+ A I+EN + + + ASD DLD + +I+Y + + E SY +I+ +G++
Sbjct: 458 SFTAYILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSETGTI 516
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--A 124
L + + V ++NDN P+ +Y + EN + ++Q+ ASD D + I+Y S A
Sbjct: 228 LNIRVNVTDINDNAPVFSQAIYKVSLKENAPIGMSVLQVKASDSDEGSNAEITYTFSDIA 287
Query: 125 GNPESYFNIDIGSGSL 140
E F +D G +
Sbjct: 288 EKGEQKFTLDPKDGKI 303
>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Takifugu rubripes]
Length = 2876
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------ESY------ 49
L +Y + E+ ++Q++ASD D + R+SY G+ E+Y
Sbjct: 717 LRDMYQGTVFEDAPVYTSVLQISASDRDSGTNGRVSYTFQGGDDGEGDFLIETYSGIIRT 776
Query: 50 ----------------FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
F +D G P ++++ VQ++NDN P+ V + +
Sbjct: 777 ARKLDRENVPVYTLKAFAVDRGVPPLKAPVSIHVV----VQDINDNAPVFEKDVLFIDVE 832
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
EN + ++ A+D D + +I Y+I GN F +DI +G L
Sbjct: 833 ENSPVGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDL 879
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLTG----- 60
Y I EN ++ + A+DGD + + YKI + S F ID + L
Sbjct: 197 YRVSIRENVEVGFEVMTIRATDGDAPSNANMIYKIVNDDGVSSIFEIDSRNGLVRIRERP 256
Query: 61 ---------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
GP V I V++ NDN P + Y Q+ EN +
Sbjct: 257 DRETRDQYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSEKRYVVQVPENVAVN 316
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
IVQ+ A+D D + ++ Y I +GN + F I +G
Sbjct: 317 TKIVQVEATDKDEGNNAKVHYSIISGNIKGQFYIHSPTG 355
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK---ISAGNP----ESYFNID 53
M + + A ++EN ++ + A DGD + R+ Y+ I+ G P S I
Sbjct: 405 MFVSTPFQATVLENVPIGYSVIHIQAIDGDSGENARLEYRLIDITPGFPFVVNNSTGWIT 464
Query: 54 IGSDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
+ +L Y V I V +VNDNVP + VY +I N+
Sbjct: 465 VSDELDRETTDFYTFGVEARDHGVPVMSSSASVSITVLDVNDNVPAFTEKVYSLKI--NE 522
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ L + D D + ++Y+IS+GN + F I SG
Sbjct: 523 DAIVGTSVLTVTAVDRDVNSVVTYQISSGNTRNRFAITSQSG 564
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------G 60
+ ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 632 VALISATDEDTGENARITYVMEDNVPQFKIDPDTGAITTQMEIDYEDQASYTLAIIARDN 691
Query: 61 GPDQVYLIVYIQ--VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
G Q Y++ VQ+ NDN P L +Y + E+ ++Q++ASD D + R+
Sbjct: 692 GIPQKSDTTYVEIIVQDANDNTPQFLRDMYQGTVFEDAPVYTSVLQISASDRDSGTNGRV 751
Query: 119 SYKISAGNP-ESYFNIDIGSG 138
SY G+ E F I+ SG
Sbjct: 752 SYTFQGGDDGEGDFLIETYSG 772
>gi|119574811|gb|EAW54426.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
gi|119574812|gb|EAW54427.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
Length = 1781
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 180 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 238
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 239 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 298
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 299 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 333
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 922 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 981
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 982 A-FHVDMDSG 990
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 504 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREE 563
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P IV I + ++ND+ P L+P+ ++E+ I +
Sbjct: 564 QESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANI 623
Query: 106 AASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 624 TAIDHDLNP--KLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 667
>gi|403272515|ref|XP_003928104.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Saimiri
boliviensis boliviensis]
Length = 2899
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q++NDN P +Y A + E Q I+Q+ A+D D + I Y I
Sbjct: 1752 RAYSKVAVLIQDMNDNSPCFEQSIYQASVSEGQFYNASIIQVFATDLDSGLNGLIEYSIL 1811
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1812 SGNQEEAFQIDALSG 1826
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E Q I+Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1775 IYQASVSEGQFYNASIIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTNVIL 1834
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ IQV ++NDN P L +++ VE LP
Sbjct: 1835 DYELTSSYSLIVQATDKGMPRLSNTTVIKIQVTDINDNAPAFL----HSEAVEIAEDSLP 1890
Query: 102 ---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1891 GVIVTHVSVHDEDLNSAFIFSFA-KESNPGAKFAIDPNTG 1929
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2165 LASDSGCPPLSATAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2224
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2225 SHAEIIYHIISGNEKGHFYLEENTGVL 2251
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP--- 62
+A + E+ + + ++ A D D + +I+Y I +GN F +D S L T P
Sbjct: 1154 FAHVKEDVTVGSLVHRVTAHDPDEGRNGKITYSILSGNENMVFMLDESSGLLTTTCPLDY 1213
Query: 63 ---DQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
Q L V I V +VND P+ +Y A + ENQ+ ++
Sbjct: 1214 EMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQQLYEASVKENQNPGEFVI 1273
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ A D D + ++ ++I G F I+ SG +
Sbjct: 1274 RVEALDRDSGVNSKLQFEIMPGASFELFQINSDSGEV 1310
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 796 TDCGSPPRNATMAVYVSVTDINDNKPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 855
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + Y +S+ + +F ID SG +
Sbjct: 856 EGNNAEVLYSVSSEDSSDHFKIDANSGEI 884
>gi|301621394|ref|XP_002940040.1| PREDICTED: hypothetical protein LOC100489805 [Xenopus (Silurana)
tropicalis]
Length = 5636
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIV 69
Q++ + S IV A D +L P ++NI I + G P Q++ +
Sbjct: 2872 QLLSSSSRYYKIVNTGALDRELVP---------------WYNITILATDRGSP-QLFTMK 2915
Query: 70 YIQ--VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+I+ + +VNDN PM + + A + EN I + ASD D + +I Y IS N
Sbjct: 2916 FIKLDISDVNDNPPMFVKSTFVAYLPENNLPGASIYNIHASDPDYGDNAKIIYSISNINT 2975
Query: 128 ES-----YFNIDIGSGSL 140
E YF+I+I +G L
Sbjct: 2976 EDFAVSPYFSINIETGVL 2993
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++NI I + G P+ + + + +VNDN P+ + VY + EN I ++
Sbjct: 4845 SWYNITILATDRGSPELSSRKFIRLDILDVNDNPPIFIKSVYNVYLPENNLPGASIYRIH 4904
Query: 107 ASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
A D D+ + ++ Y IS N E SYF+I+I +G L
Sbjct: 4905 ALDLDMGDNAKVIYSISNTNTEDFPVSSYFSINIETGVL 4943
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++NI I + G P+ + + + +VNDN P+ + VY + EN I ++
Sbjct: 5201 SWYNITILATDRGSPELSSRKFIRLDILDVNDNPPIFIKSVYNVYLPENNLPGASIYRIH 5260
Query: 107 ASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
A D D+ + ++ Y IS N E SYF+I+I +G L
Sbjct: 5261 ALDLDMGDNAKVIYSISNTNTEDFPVSSYFSINIETGVL 5299
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++NI I S G P + + + +VNDN P+ + Y + EN I ++
Sbjct: 4125 SWYNITILSTDRGSPQLSSKKFIRLDISDVNDNPPVFIKSAYTIYLPENNLPGATIYRIH 4184
Query: 107 ASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
A D D+ + ++ Y IS N E SYF+I+I +G L
Sbjct: 4185 ALDLDMGDNAKVIYSISNTNTEDFPVSSYFSINIETGVL 4223
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 49 YFNIDIGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++NI I + G P + ++ + + +VNDN P+ Y A I EN I ++ A
Sbjct: 2081 WYNITIQATDRGSPHLSNIKLIKLDISDVNDNAPVFTKSSYVAYIAENNLAGASIYRIQA 2140
Query: 108 SDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
SD D + +I Y I + E S+F+I+I +G L
Sbjct: 2141 SDIDAGDNAKIIYSIYNTDTEDYSMSSFFSINIETGVL 2178
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 49 YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++NI I + G P ++ + + +VNDN P+ Y + I EN I ++ A
Sbjct: 1270 WYNITIQATDRGSPHLSNSKLIKLDISDVNDNAPVFTKSSYVSYIAENNLAGASIYRIQA 1329
Query: 108 SDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
SD D + ++ Y I + E S+F+I+I +G L
Sbjct: 1330 SDIDAGDNAKVIYSIYNTDTEDYSMSSFFSINIETGVL 1367
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I ++ G P + + + +VNDN P+ L Y A + EN I ++ AS
Sbjct: 3672 YNITILANDKGSPQLSSRKSILLDISDVNDNPPVFLKSRYIAYLPENNLPGASIYKVQAS 3731
Query: 109 DGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
D D + ++ Y + N E SYF+I+I +G L
Sbjct: 3732 DLDTGENSKVIYSVFNTNTEAFPVSSYFSINIETGVL 3768
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
++ I V +VNDNVP+ VY A I EN ++ + A+D D + +I Y S +
Sbjct: 232 LIKITVTDVNDNVPVFTQAVYKASISENSPVNTTVLYVNATDKDEGINAQIVYSFSKTSE 291
Query: 128 ESY 130
S+
Sbjct: 292 NSF 294
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 30 DLDPDQ-RISYKISAGNPESYFNIDIGSDLTGGPDQV----------------------- 65
DL P + RI ++S E YF+ID+ S + D++
Sbjct: 909 DLTPRRLRIVSRVS----EKYFSIDLQSGMLYVKDRIDRETLCGAEPTCSLTFDAMVENP 964
Query: 66 --YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ V I++Q++NDN PM V + QI+E+ S + A D D+ + +Y++S
Sbjct: 965 LNVVTVEIEIQDINDNAPMFYHDVIHLQIIESTSPGTHLALQNAEDADIGTNTIQTYRLS 1024
>gi|62510862|sp|Q5DRA9.1|PCDGE_PANTR RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
Length = 931
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 495
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 496 LKPREILSYVSVSAQSG 512
>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 644
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P VQ + G D R+S ++ SY D P + I V + NDN
Sbjct: 371 PAVQTPFTVGSADGLLRVSGRLDRETKSSYELTVTAKDRGEPPKSSQSKIRIHVLDENDN 430
Query: 80 VPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ DP Y A I EN S ++Q++A+D D + R+ + I+AG+ F I SG
Sbjct: 431 SPI-FDPKQYSAAIAENASIGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSG 489
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 40/171 (23%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-------------- 52
Y A I EN S ++Q++A+D D + R+ + I+AG+ F I
Sbjct: 439 YSAAIAENASIGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSGVVRVAKNLN 498
Query: 53 --------------DIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D SD G + + + I + ++NDN P LD Y A ++EN
Sbjct: 499 YERKSHYTVTVRAEDSASDTENGSEVRFDTARLSITITDINDNPPTFLDSPYLAYVMEN- 557
Query: 97 SGILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSLG 141
++P ++ + A D D P + ++ Y + G+ + +F I+ +G +
Sbjct: 558 --VIPPNGGYVITVRAYDADTPPFNSQVRYFLKEGDTD-FFKINASTGEIS 605
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--------NPES------- 48
+P Y I EN + + +AA+D DL + ++Y + + NP++
Sbjct: 121 EPAYSFDIPENAARGFQVGVIAATDPDLGANADVTYTVISDWANDVFSLNPQTGIFTLTA 180
Query: 49 --------YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSG 98
++ + + + G P L VY V ++NDN P+ DP+ Y+ +I EN
Sbjct: 181 RLDYEEVQHYILVVQAQDNGHPSLSSTLTVYCNVIDLNDNAPI-FDPMSYSNEIFENVPI 239
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+V ++A+D D + RI Y I++G+ F I
Sbjct: 240 STDVVTVSATDTDSGINGRIEYSITSGDDNEDFQI 274
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+T G + IQV + NDN P +P Y I EN + + +AA+D DL +
Sbjct: 94 VTDGVQSTETTITIQVTDTNDNPPTFAEPAYSFDIPENAARGFQVGVIAATDPDLGANAD 153
Query: 118 ISYKISAGNPESYFNIDIGSG 138
++Y + + F+++ +G
Sbjct: 154 VTYTVISDWANDVFSLNPQTG 174
>gi|403255746|ref|XP_003920572.1| PREDICTED: protocadherin gamma-B4 [Saimiri boliviensis boliviensis]
Length = 803
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 45 NPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
NPE +NI I + G P + + + +VNDN P+ P Y + EN I
Sbjct: 413 NPE--YNITITATDRGKPPLSSSSSITLHIGDVNDNAPVFSQPAYIVYVSENNPPGASIS 470
Query: 104 QLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Q++ASD DL P+ ++SY I A + E SY ++ SG
Sbjct: 471 QVSASDPDLGPNGQVSYSIVASDLEPRELSSYVSVSAQSG 510
>gi|348531808|ref|XP_003453400.1| PREDICTED: protocadherin-8-like [Oreochromis niloticus]
Length = 915
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ DL P + I++ + NDN P+ PVY +VEN + I + A D D+
Sbjct: 431 VAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVSVVENNAPGAYITTVVARDVDMG 490
Query: 114 PDQRISYKIS----AGNPESYF-NIDIGSGSL 140
+ +++YK++ G+P S F ++D SGSL
Sbjct: 491 SNGKVTYKLADTYFMGSPISTFVSLDPASGSL 522
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNPESY----------- 49
PVY +VEN + I + A D D+ + +++YK++ G+P S
Sbjct: 463 PVYEVSVVENNAPGAYITTVVARDVDMGSNGKVTYKLADTYFMGSPISTFVSLDPASGSL 522
Query: 50 -----FNIDI---------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY---YAQI 92
FN ++ SD P VY+++ + NDN P P A++
Sbjct: 523 YALRSFNYEVMKQLELRITASDAGSPPLSGSASVYVRIVDQNDNAPYITQPALNNGSAEV 582
Query: 93 V---ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ SG + I ++ A D D + +SY ++ G P S F+++ +G +
Sbjct: 583 LLPRDSPSGYV-ITRVEARDADEGVNAELSYGLATGEP-SVFSVNKATGEI 631
>gi|148700221|gb|EDL32168.1| cadherin 23 (otocadherin), isoform CRA_b [Mus musculus]
Length = 1951
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 95 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 154
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 155 GINSVLSYYITEGNEDMTFRMDRISGEIA 183
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 130 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 189
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 190 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 249
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 250 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 287
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 412 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 471
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 472 ASDADSGCNALLTFNITAGNRERAFFINATTG 503
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 669 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 728
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 729 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 788
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 789 IIANVTAIDLDLNP--KLEYHIISIVAKDDTDRLVPDQEDAFAVNINTGSV 837
>gi|403255762|ref|XP_003920580.1| PREDICTED: protocadherin gamma-B2 [Saimiri boliviensis boliviensis]
Length = 822
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 8 YAQIVENQSGILPIVQL----AASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD 63
Y Q++ N IL +DG LD ++ Y ++ +D P
Sbjct: 383 YCQVLGNAKFILKSSSKNYYKLVTDGALDREETPEYNLTI----------TATDGGKPPL 432
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+IV + + ++NDN P+ Y + EN + Q++ASD DL P+ ++SY I
Sbjct: 433 SSSIIVILHISDINDNAPVFQQNSYMVHVAENNPPGASVAQISASDPDLGPNGQVSYSIV 492
Query: 124 AGNPE-----SYFNIDIGSG 138
A + E SY ++ SG
Sbjct: 493 ASDLEPQELLSYVSVSAQSG 512
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNI--------------------DIGSDLTG 60
++Q++ +D D+D I Y I +G+P S F I ++G +T
Sbjct: 1685 VLQISTTDKDVDLKTPIEYYIISGDPLSQFQIKNTGEVFVVKALDRESISRYELGVIVTD 1744
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQR 117
G + I V + NDN P L Y Q+ E G+ P ++Q+ A+D D + R
Sbjct: 1745 GKYTSTTNISITVLDANDNPPYCLKYRYREQLSE---GVHPGTFVLQIQANDIDEPANSR 1801
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ + ++ GN FN+D SG L
Sbjct: 1802 LRFYLT-GNGAEDFNLDKDSGQL 1823
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV- 65
Y+A + E S I+++ A+ D + I+Y I GN F ++ + + D +
Sbjct: 1980 YFASVPEINSVGSEILKVLATSKDTGINAEINYSIIGGNEHRKFAMNNRTGILSLADTLD 2039
Query: 66 ------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
Y + V I V + NDN P Y A+I E+ I
Sbjct: 2040 YERAKDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNPPQFTQNSYTARIREDAQKGDKI 2099
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+Q+ A+D D + + R+SYKI G+ F I+ +G
Sbjct: 2100 LQVRANDMDAEENGRVSYKIERGDRMGQFAIEPETG 2135
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESY--FNIDI--GSDL 58
+ +Y I E+ ++QL A+D D D+++ Y + A +P S F +D GS +
Sbjct: 197 ESLYRVDISESIEEGTEVLQLHATDAD--EDKKLFYSLHAARDPVSLKLFRVDSVSGSII 254
Query: 59 T---------------------GGP-DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
T G P + Y V I V + ND+ P + ++ E
Sbjct: 255 TAHKLDREALAEHVLIVIVKDQGTPAKRNYAKVIITVHDHNDHAPEFTSKIVQGKVYETA 314
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ +VQ+ A D D+ + RI+Y I +GN + FNID
Sbjct: 315 TVGTRVVQVYAIDRDIGDNARITYSIVSGNIGNVFNID 352
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPD 63
Y A+I E+ I+Q+ A+D D + + R+SYKI G+ F I+ + + G D
Sbjct: 2085 YTARIREDAQKGDKILQVRANDMDAEENGRVSYKIERGDRMGQFAIEPETGYISVAGTLD 2144
Query: 64 Q---------------------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y++V I++ + NDN P+ Y A + E++ +
Sbjct: 2145 RESISNYVLEVQARDNGLPTLTAYVLVNIEISDANDNPPIFTIQNYTAVVQEDKQIGYTL 2204
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
++ +D D P+ ++ +GN F I+
Sbjct: 2205 LKFEVTDADSAPNAAPYTFDFRSGNDGGAFRIE 2237
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y + E+ + + ++ASD D R++Y I+ GN ++ID
Sbjct: 1149 PSYTCVLSEHAARGQFVTVVSASDPDYIDHDRLTYTIAQGNELQTYDIDPISGIITLVNM 1208
Query: 54 ----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ +T G + V I + N + P Y ++ ENQ +
Sbjct: 1209 QNFAEKHQSVLNVSVTDGVYTSFTRVKITILPANLHNPAFEHMFYDVKVNENQLAGRLVT 1268
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+D D R+SY I + + YF+ID G +
Sbjct: 1269 TVKATDKDFGEYGRLSYSIISDEIQEYFSIDKEKGEI 1305
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y ++ P ++ +N+ + +
Sbjct: 1890 VTKIHATDADIGVNRKIKYSFIDSYRDHFRIAPDSGIVTLSKPLDREVKALYNLTVRATD 1949
Query: 59 TGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + +LIV VQ++NDN P Y+A + E S I+++ A+ D +
Sbjct: 1950 QGKPSLFNSAFLIV--NVQDINDNPPEFTSKHYFASVPEINSVGSEILKVLATSKDTGIN 2007
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
I+Y I GN F ++ +G L
Sbjct: 2008 AEINYSIIGGNEHRKFAMNNRTGIL 2032
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 50 FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
+N+ I ++ G VY +Y+ V ++ND+ P + +Y I E+ ++QL A+D
Sbjct: 164 YNLTIS--ISDGVHVVYTQLYVSVIDINDHRPEFTESLYRVDISESIEEGTEVLQLHATD 221
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F +D SGS+
Sbjct: 222 A--DEDKKLFYSLHAARDPVSLKLFRVDSVSGSI 253
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKIS--AGNPESYFNID------------------------I 54
I+++ A D D +Q ++Y + + N YF++D I
Sbjct: 1058 ILKVQAKDNDTGINQVVTYALQTDSKNTSEYFHMDATDGVIYLKKSLDHETLSHHHFTVI 1117
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
SD V++ V ++NDN P P Y + E+ + + ++ASD D
Sbjct: 1118 ASDRGVPSLSSTAHVWVSVLDMNDNPPKFEQPSYTCVLSEHAARGQFVTVVSASDPDYID 1177
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
R++Y I+ GN ++ID SG
Sbjct: 1178 HDRLTYTIAQGNELQTYDIDPISG 1201
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 29/147 (19%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------- 56
LP+V + A D D + + Y I P YF+ID +
Sbjct: 542 LPLV-IKAKDADSGLNALLHYDILEVMPRRYFHIDSNTGAIKTIMHLDHEKIPFFSFHVK 600
Query: 57 --DLTGGP---DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
DL G P + V I V +VND P Y ++ + ++Q+ A+D D
Sbjct: 601 VTDL-GKPRLTSETTAEVRIAVNDVNDCAPAFTQKEYNVTLLLPTYENVAVIQVNATDED 659
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSG 138
+ + Y I GN + F ID GSG
Sbjct: 660 SSENSTLRYDIIEGNRDGVFVIDAGSG 686
>gi|148705744|gb|EDL37691.1| protocadherin 7, isoform CRA_c [Mus musculus]
Length = 1247
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|345324548|ref|XP_001506551.2| PREDICTED: hypothetical protein LOC100074995 [Ornithorhynchus
anatinus]
Length = 651
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPE 128
++V + NDN P+ PVY + EN + + +AA D DL + R++Y++ + G
Sbjct: 326 VRVADENDNAPLFARPVYAVAVRENNAPGAHLATVAARDPDLGRNGRVTYRLLDADGAAA 385
Query: 129 SYFNIDIGSGSL 140
Y ++D SG+L
Sbjct: 386 PYVSVDPASGAL 397
>gi|51345990|gb|AAU01514.1| protocadherin 7c [Rattus norvegicus]
Length = 1255
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|449500407|ref|XP_002196414.2| PREDICTED: protocadherin-23 [Taeniopygia guttata]
Length = 3244
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
E F I + V+ V + +Q+VNDN P Y A + E QS IVQ+
Sbjct: 2076 EDKFKIHLTVVAENSFSSVFCGVTVLIQDVNDNAPKFEQSYYKASVWEGQSPKTDIVQVF 2135
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
A+D D + Y I +GN + F ID G L
Sbjct: 2136 ATDLDSGLNGETEYSIVSGNENATFLIDSVRGILA 2170
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID---IGSDL--- 58
+Y + E+ S ++ +A D D D + Y I GN E+ F+++ +GS+
Sbjct: 2425 LYNLSVSEDASVGESVLLFSAIDCDWTHDNTFVEYSIIGGNAENLFSVETSIVGSETSYK 2484
Query: 59 --------------TGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYA 90
T Q+ L+ V I V +VNDN P+ Y+
Sbjct: 2485 LVGSLVLSSALDRETAASHQLVLLASDHGTPSLNSTATVLITVLDVNDNPPVFSSSEYHV 2544
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ I +++A D D + I+Y I +GN YF +D +GS+
Sbjct: 2545 HVKESIPIGSHITEVSAKDCDAGTNAEITYAIISGNDRGYFGLDGRTGSV 2594
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGSD 57
Y A + E QS IVQ+ A+D D + Y I +GN + F ID G D
Sbjct: 2117 YKASVWEGQSPKTDIVQVFATDLDSGLNGETEYSIVSGNENATFLIDSVRGILAANTGLD 2176
Query: 58 L--------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G P IV IQV +VNDNVP+ + P+ ++ EN +
Sbjct: 2177 YETTSSYRLVVQAADKGNPRLSATAIVRIQVLDVNDNVPV-VQPLGEVEVPENTLPGFIV 2235
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
Q++ASD D P + I + E F I+ +G
Sbjct: 2236 TQVSASDADSRPALHFGF-IYDNSSEMKFAINQHTG 2270
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG----NPESYFNID-------I 54
VY A++ E+ + ++Q+ A+D D D I Y + G F ID +
Sbjct: 566 VYRARLPEHAARGRRLLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDPHTGQIFV 625
Query: 55 GSDLTGGPDQVY----------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D+ DQ V I+++++NDN P+ +Y I +
Sbjct: 626 SQDIDREEDQTTYDLLVKAKDGGGLSGQAFVRIEIEDINDNQPVFEQDIYVTSISSHTQP 685
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A+D D ++Y++ G S+F +D +G
Sbjct: 686 GAEIINVVATDRDSGIFGIVTYELVPGEFSSFFTVDASTG 725
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-- 124
L V ++V + NDN P Y A++ E+ + +L A+D DL + + Y I+
Sbjct: 213 LRVSVRVLDENDNAPAFSRGEYRARLREDAPPGTAVCRLRATDPDLGANGEVRYAINRRQ 272
Query: 125 GNPESYFNIDIGSGSL 140
+P+ YF ++ SG L
Sbjct: 273 SDPDGYFAVEERSGVL 288
>gi|363738857|ref|XP_003642082.1| PREDICTED: uncharacterized protein LOC100857645 [Gallus gallus]
Length = 1680
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 59/168 (35%)
Query: 33 PDQRISYKI-SAGNPESYFNIDIGSDLTGG----------PDQVYLIVYIQVQN------ 75
PD+R+++KI G+P S F ++ DL G P+ Y V+IQ +N
Sbjct: 998 PDERVTFKIPERGDPGSRFPVEAAQDLDIGSNDIQAYSIIPENEYFTVFIQSENEKFIEL 1057
Query: 76 ----------------------------------------VNDNVPMTLDPVYYAQIVEN 95
+NDN P+ +Y A ++EN
Sbjct: 1058 VLEKPLDREEQPEMDFTLVATDGGSPPRTGSTEILIVVLDINDNAPIFTQKLYIAHVLEN 1117
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSLG 141
++++ A+D D + ISY+ S G+ S F I+ +G +G
Sbjct: 1118 APEGSVVLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIG 1165
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNPE 128
+ + +VNDN P+ Y + EN + L + + A+D D P+ ++SY + A PE
Sbjct: 1303 VDISDVNDNAPVFNQTSYTMYVHENNAPALLVGAVKATDADAGPNAKVSYSVVPARGPE 1361
>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
Length = 3360
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +V+DN P YY I E+ PI+ ++ASD D+ +SY +++GN +
Sbjct: 2639 VSIEVLDVDDNPPAFSSLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGNEK 2698
Query: 129 SYFNIDIGSGSL 140
+F ++ +G L
Sbjct: 2699 QHFCLEEKTGVL 2710
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1716 LYEASVKENQNPGEFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATL 1775
Query: 60 ----------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG + ++ V++ ND+ P + P +++ENQ L
Sbjct: 1776 DREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVLENQEPGL- 1834
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ASD D + ++Y I GN + YF ++ SG L
Sbjct: 1835 VYTFLASDMDAGSNGAVTYHIIDGNTDEYFAVNEMSGEL 1873
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP-- 62
VY + E Q IVQ+ A+D D + + Y I +GN + F +D + LT
Sbjct: 2234 VYQVSVSEGQFYNHHIVQVFATDLDSGSNGLVEYSILSGNQGNVFQMDPLSGVLTASAIL 2293
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D Y Y IQV ++NDN P+ L P +IVEN
Sbjct: 2294 DYEYTSTYSLIVQAMDKGMPRLSDTTVIKIQVTDINDNAPIFL-PSEAVEIVENSLPGTI 2352
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +++ D D +P S+ + N + F ID +G
Sbjct: 2353 VTRISVYDVDSNPAFTFSF-VKESNSGTKFAIDRNTG 2388
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q++ND+ P VY + E Q IVQ+ A+D D + + Y I
Sbjct: 2211 KAYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYNHHIVQVFATDLDSGSNGLVEYSIL 2270
Query: 124 AGNPESYFNIDIGSGSL 140
+GN + F +D SG L
Sbjct: 2271 SGNQGNVFQMDPLSGVL 2287
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRI 118
GG V +++++VNDN P+ +P+ Y + Q+ + ++ + A+D D +
Sbjct: 736 GGGLSAQAFVRVELEDVNDNEPV-FNPLTYVTSLSGQAQLGTEVINVLATDRDSGKYGTV 794
Query: 119 SYKISAGNPESYFNIDIGSG 138
+Y++ G+ S+F ID +G
Sbjct: 795 AYELVLGDLSSFFTIDSTTG 814
>gi|170295849|ref|NP_001116230.1| protocadherin 7 isoform 1 precursor [Mus musculus]
Length = 1255
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|322789053|gb|EFZ14511.1| hypothetical protein SINV_16551 [Solenopsis invicta]
Length = 1727
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V+I+V + NDNVP +D ++E ++ A+D DL + +++ ISAGN
Sbjct: 1273 VHIEVLDENDNVPRFVDNKLKISVLETTPINTELLHFKATDNDLGSNSELTFAISAGNKR 1332
Query: 129 SYFNIDIGSGSL 140
F ID +G L
Sbjct: 1333 DTFYIDSLTGIL 1344
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 26/157 (16%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI------------- 54
+A + EN + + +A D D + S +I AGN +F +++
Sbjct: 337 FATVDENTAKDAIVAAVAVIDDDEGLNGETSVEIRAGNELGHFRLEVTESFNIVRVDGRL 396
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P + I V +VND+ P+ Y A + E
Sbjct: 397 DREEIPKYNLTVVATDKGTPPRSTTAYLVIHVNDVNDHEPVFQQSEYSAVLSELAPIGSF 456
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D + RI Y+ GN + +F ID +G
Sbjct: 457 VASISATDADSGLNARIYYEFGLGNEQGWFAIDSDTG 493
>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
Length = 3360
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +V+DN P YY I E+ PI+ ++ASD D+ +SY +++GN +
Sbjct: 2639 VSIEVLDVDDNPPAFSSLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGNEK 2698
Query: 129 SYFNIDIGSGSL 140
+F ++ +G L
Sbjct: 2699 QHFCLEEKTGVL 2710
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1716 LYEASVKENQNPGEFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATL 1775
Query: 60 ----------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG + ++ V++ ND+ P + P +++ENQ L
Sbjct: 1776 DREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVLENQEPGL- 1834
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ASD D + ++Y I GN + YF ++ SG L
Sbjct: 1835 VYTFLASDMDAGSNGAVTYHIIDGNTDEYFAVNEMSGEL 1873
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP-- 62
VY + E Q IVQ+ A+D D + + Y I +GN + F +D + LT
Sbjct: 2234 VYQVSVSEGQFYNHHIVQVFATDLDSGSNGLVEYSILSGNQGNVFQMDPLSGVLTASAIL 2293
Query: 63 DQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D Y Y IQV ++NDN P+ L P +IVEN
Sbjct: 2294 DYEYTSTYSLIVQAMDKGMPRLSDTTVIKIQVTDINDNAPIFL-PSEAVEIVENSLPGTI 2352
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +++ D D +P S+ + N + F ID +G
Sbjct: 2353 VTRISVYDVDSNPAFTFSF-VKESNSGTKFAIDRNTG 2388
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q++ND+ P VY + E Q IVQ+ A+D D + + Y I
Sbjct: 2211 KAYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYNHHIVQVFATDLDSGSNGLVEYSIL 2270
Query: 124 AGNPESYFNIDIGSGSL 140
+GN + F +D SG L
Sbjct: 2271 SGNQGNVFQMDPLSGVL 2287
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRI 118
GG V +++++VNDN P+ +P+ Y + Q+ + ++ + A+D D +
Sbjct: 736 GGGLSAQAFVRVELEDVNDNEPV-FNPLTYVTSLSGQAQLGTEVINVLATDRDSGKYGTV 794
Query: 119 SYKISAGNPESYFNIDIGSG 138
+Y++ G+ S+F ID +G
Sbjct: 795 AYELVLGDLSSFFTIDSTTG 814
>gi|51854233|ref|NP_001004087.1| protocadherin-7 precursor [Rattus norvegicus]
gi|51346003|gb|AAU01515.1| protocadherin 7c1 [Rattus norvegicus]
gi|149047190|gb|EDL99859.1| protocadherin 7, isoform CRA_b [Rattus norvegicus]
Length = 1247
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|390459340|ref|XP_003732281.1| PREDICTED: protocadherin gamma-B7-like [Callithrix jacchus]
Length = 810
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P + + + +VNDNVP+
Sbjct: 406 TDGALDREQ---------TPE--YNVTITATDRGKPPLSSSKTITLHITDVNDNVPVFGQ 454
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
Y + EN I Q++ASD D P+ +SY I A + ES
Sbjct: 455 SAYLVHVPENNQPGASIAQVSASDPDFGPNGHVSYSIVASDLES 498
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY+A++ E + + ++ A+ D + I Y I GN F ID + +
Sbjct: 1963 VYFARVPEIYAVGTEVARVLATSKDTGVNADIYYSIVGGNEHKKFQIDAKTGVVTIAELL 2022
Query: 60 ----------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
GG P + V I V + NDN P+ + Y A + E+
Sbjct: 2023 DYERARDYFLTIQAVDGGIPPLSNHATVNITVTDSNDNAPIFSEVSYRAAVREDAKIGEK 2082
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 2083 VAQVYANDLDSEENGNVSYYIERGDRQKQFSIDRKTGQI 2121
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNID--IGSDL 58
+ Y+ I EN I+QL A+D D D+++ Y + A ++ F++D +GS
Sbjct: 195 ESTYHVDISENVEKGERILQLHATD--RDEDKKVFYSLHAAQSQASLEIFHVDSVLGSIT 252
Query: 59 TGGP----------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + Y V + V + ND+ P + + ++ E
Sbjct: 253 LNEPLDREAIERHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYETS 312
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + RI+Y I++GN + F +D
Sbjct: 313 PVGTAVVQVCAIDRDRGENARITYSITSGNVGNVFAVD 350
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 6 VYYAQIVENQSGILPIVQLAA---SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
V YA + E I I +L + LD +Q Y+I I +D GG
Sbjct: 1267 VMYAIMSETMKEIFDINKLTGEIVTRKKLDREQLKRYEIPV----------IATD--GGG 1314
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+++V ++V + NDN P+ L Y A I N S P +++ A D D D +I Y I
Sbjct: 1315 RSGFVMVRVKVGDENDNAPVFLLREYKATIQSNLSLNTPFLKVRAQDADEDEAAKIVYSI 1374
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 1614 PEYKFQV-VATD-NGNPKHFARASVHVKLKDYNDNAPAFVDDRYEATVNEDALPGTVVVK 1671
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+P S F I
Sbjct: 1672 LITVDKDSDVNTPIEFYITSGDPRSQFQI 1700
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 25/153 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGP-- 62
Y A + E+ + Q+ A+D D + + +SY I G+ + F+ID G P
Sbjct: 2069 YRAAVREDAKIGEKVAQVYANDLDSEENGNVSYYIERGDRQKQFSIDRKTGQITVAAPLD 2128
Query: 63 -DQV-------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+++ +++V I++ + NDN P+ P Y A + E++S +
Sbjct: 2129 REEIANYVLEVHARDSGIPMLSSFVMVNIEIMDANDNPPLFSLPNYTAVVQEDKSLGHTV 2188
Query: 103 VQLAASDGDLDPDQR-ISYKISAGNPESYFNID 134
+Q +D D +P+ ++ +GN F ++
Sbjct: 2189 LQFVVTDADTEPNAEPYTFDFRSGNEGDAFRLE 2221
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + ++ASD D D++++Y I GN +
Sbjct: 1117 VWVSVIDMNDNPPKFEQPSYTCSLSEHAERGQFVTVVSASDPDY-VDEKLTYTIVGGNEQ 1175
Query: 129 SYFNIDIGSG 138
+NID SG
Sbjct: 1176 QTYNIDQSSG 1185
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYK-----------------ISAGNP-----ESYFNIDIGSDL 58
+ ++ A+D D+ +++I Y+ ++ G P ++ +N+ I +
Sbjct: 1874 VTKVHATDDDIGINRKIRYEFIDSADGHFFIAADSGIVTLGKPLDRETKAMYNVTIQALD 1933
Query: 59 TGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P + + + + VQ++NDN P VY+A++ E + + ++ A+ D +
Sbjct: 1934 QGTPQLMGVASLIVNVQDINDNPPEFASKVYFARVPEIYAVGTEVARVLATSKDTGVNAD 1993
Query: 118 ISYKISAGNPESYFNIDIGSG 138
I Y I GN F ID +G
Sbjct: 1994 IYYSIVGGNEHKKFQIDAKTG 2014
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ DGD LD D+ + I N ++++N+ IG +T
Sbjct: 112 LVALVQATDKDGDSLWYDILDGDKDDEFFIGRDNGNVLLAKQLDWESQNFYNLTIG--VT 169
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G +++ V ++ND+ P + Y+ I EN I+QL A+ D D D+++
Sbjct: 170 DGVHTALTQLFVTVIDINDHRPEFSESTYHVDISENVEKGERILQLHAT--DRDEDKKVF 227
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D GS+
Sbjct: 228 YSLHAAQSQASLEIFHVDSVLGSI 251
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+P S F I ++
Sbjct: 1651 VDDRYEATVNEDALPGTVVVKLITVDKDSDVNTPIEFYITSGDPRSQFQIRSTGEVYVAK 1710
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +QV +VNDN P L Y + E +
Sbjct: 1711 SLDRETIDRYELEIVGTDGKYVFETRVTVQVLDVNDNPPYCLRYRYREVLSEGSHPGAYV 1770
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 1771 LTVLATDYDDEPNAKLRFYLTGENNDK-FSLDKETGVL 1807
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 48 SYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL------ 100
++N+ + + G V ++ + V + NDN P L +Y I E S G L
Sbjct: 468 KFYNLSVSATNMAGASAVCNVI-VHVLDRNDNAPRFLQALYSGGISEGASIGSLVLTNTS 526
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P YF+ID +G++
Sbjct: 527 APLV-IKAEDADSELNALLNYDIVEDLPRKYFHIDSSTGAI 566
>gi|432907402|ref|XP_004077626.1| PREDICTED: cadherin-23-like [Oryzias latipes]
Length = 575
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 71 IQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I + +VNDN P+ P Y + EN G ++++ A+D D+ P+ +SY I+ GN +
Sbjct: 419 INILDVNDNAPVVESPRGYNVSVSENVGGGTSVLRVVATDRDMGPNALLSYYITNGNQDL 478
Query: 130 YFNIDIGSGSL 140
F +D +G +
Sbjct: 479 TFRMDRMTGEM 489
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-TGGPD------------------ 63
++ A+D D + R+ Y+I +GN + F+ID S L T GP
Sbjct: 27 RVQATDADQGENGRVLYRILSGNSNNLFSIDRQSGLVTRGPKALDRETSSSHVLEVEAYN 86
Query: 64 --------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
V +IVY V + ND P+ Y + +GI ++ + A+D D
Sbjct: 87 SDEGSMRSSVRVIVY--VDDANDEFPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTGD 144
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y++ +G+ + F +D+ +G
Sbjct: 145 GGAVAYRLVSGS-DRKFEVDVSTG 167
>gi|326673403|ref|XP_003199875.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 820
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLD 85
+DGDLD ++ ES +NI + G P + +Q+ +VNDN P+
Sbjct: 396 TDGDLDRER-----------ESEYNISVTCADEGVPSLSNTVTLSLQISDVNDNAPVFEQ 444
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
Y A + EN + L I + A D D + + R+SY
Sbjct: 445 SSYQASVQENNTPGLSIFTVRARDADFNQNARVSY 479
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGN 126
++I V + NDN P+ +Y A I EN I + ASD D +I+Y I S GN
Sbjct: 218 IHITVLDANDNAPVFTHKIYKASITENAVRGTIITTVTASDLDEGSYGKITYAITNSLGN 277
Query: 127 PESYFNIDIGSGSL 140
F I+ +G +
Sbjct: 278 FPMLFEINETNGEV 291
>gi|301624551|ref|XP_002941564.1| PREDICTED: cadherin-24-like [Xenopus (Silurana) tropicalis]
Length = 723
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGN 126
I+VQ++NDN P+ L P Y A + E + ++Q+ ASD D DP R+ Y I G
Sbjct: 75 IKVQDINDNPPVFLHPPYRATVPEMSNVGTSVIQVTASDAD-DPTYGNSARLVYTILEGQ 133
Query: 127 PESYFNIDIGSG 138
P YF++D +G
Sbjct: 134 P--YFSVDPQTG 143
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 34/162 (20%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNID--IGS 56
L P Y A + E + ++Q+ ASD D DP R+ Y I G P YF++D G
Sbjct: 88 LHPPYRATVPEMSNVGTSVIQVTASDAD-DPTYGNSARLVYTILEGQP--YFSVDPQTGV 144
Query: 57 DLTGGPD-----QVYLIVYIQVQ--------------------NVNDNVPMTLDPVYYAQ 91
T P+ Q +V IQ + +VNDN P +Y
Sbjct: 145 IRTAIPNMDRETQNEFLVVIQAKDMGGHVGGLSGSTTVTVTLSDVNDNPPKFPQNLYQFT 204
Query: 92 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++EN + I +L A D D+ + +SY I G+ F++
Sbjct: 205 VLENIAPGSVIGRLRAHDPDIGENAAMSYSILDGDAGDTFSV 246
>gi|301609788|ref|XP_002934440.1| PREDICTED: cadherin-20-like [Xenopus (Silurana) tropicalis]
Length = 796
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A +D ++ P+ ++I ++Q++NDN P LD Y A
Sbjct: 121 LDREERSQYTLRAQA------LDRSTNKPMEPESEFII---KIQDINDNEPKFLDGPYTA 171
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E I+Q++A+D D DP R+ Y I G P YF++D +G
Sbjct: 172 SVAEMSPVGTSIIQVSATDAD-DPTYGSSARVVYSILQGQP--YFSVDSKTG 220
>gi|47209298|emb|CAF94673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3417
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E++ + IGSD G P + + ++I V + NDN P+ PVY A+I EN G + +
Sbjct: 2869 ETHTLVLIGSD-GGEPHRSGTVRIHITVLDANDNAPVCSQPVYRAEIRENSPGGTVVTTV 2927
Query: 106 AASDGDLDPDQRISYKIS--AGNPESYFNIDIGSGSL 140
A+D D + +SY I+ A + F I+ +G +
Sbjct: 2928 KATDADTGLNGEVSYSIAYVAIEASNLFAINSQTGEI 2964
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI + + +G P ++++ + +VNDN P+ Y A I EN S I L A
Sbjct: 1087 YNITVTATDSGSPPLSASKMLHLVISDVNDNAPIFERQRYSAYITENNSPGASIFALTAR 1146
Query: 109 DGDLDPDQRISYKIS----AGNP-ESYFNIDIGSG 138
D D + + RISY + +G+P SY +++ SG
Sbjct: 1147 DSDWNQNARISYILEETQVSGSPISSYLSLNSESG 1181
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY-----KISAG 125
I++ +VNDN P+ VY A +VEN S + ++ L A D D + + RISY I A
Sbjct: 1989 IKISDVNDNAPVFPQAVYSAYVVENNSPGVSVLTLRAKDPDENQNARISYILEDTDIGAS 2048
Query: 126 NPESYFNIDIGSG 138
Y +++ SG
Sbjct: 2049 PISEYISVNAESG 2061
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AGNPE 128
+ V + NDN+P+ +Y + ++EN S ++ ++A+D D I+Y +S G
Sbjct: 899 VSVLDANDNIPVFNQDIYKSSVIENTSKGTSVMTVSATDADSGSYGLITYSLSKMKGGAA 958
Query: 129 SYFNIDIGSGSLG 141
F ID +G++
Sbjct: 959 EIFTIDERTGTIS 971
>gi|74213455|dbj|BAE35541.1| unnamed protein product [Mus musculus]
Length = 1069
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
+Y+A++ E + + ++ A+ D + I Y I GN F ID + + +Q+
Sbjct: 2006 LYFAKVPEIYAVGTEVARVLATSKDTGVNADIYYSIVGGNEHKKFQIDAKTGVLTIAEQL 2065
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ V I V + NDN P+ + Y A + E+
Sbjct: 2066 DYERARDYFLTIQAIDGGIPPLSNHATVNITVTDSNDNAPIFSEVSYRAFVREDAKTGEK 2125
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ Q+ A+D D + + +SY I G+ + F+ID +G +
Sbjct: 2126 VTQIYANDLDSEENGNVSYYIERGDRQKQFSIDRKTGQIA 2165
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 29/158 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNID--IGSDL 58
+ Y I EN I+QL A+D D D+++ Y + A ++ F++D +GS
Sbjct: 238 ETTYRVDISENVEKGERILQLHATDED--EDKKVFYSLHAAQTQASLEIFHVDSVLGSIT 295
Query: 59 TGGP----------------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P + Y V + V + ND+ P + + ++ E+
Sbjct: 296 LNEPLDRETIEEHVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVYESS 355
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VQ+ A D D + +I+Y I++GN + F ID
Sbjct: 356 PIGTAVVQVCAIDRDRGENAKITYSITSGNVGNVFTID 393
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 18 ILPIVQLAASDGD------LDPDQRISYKISAGN------------PESYFNIDIGSDLT 59
++ +VQ DGD LD D+R + I N ++++N+ IG +T
Sbjct: 155 LVALVQANDKDGDSLWYDILDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTIG--VT 212
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
G + + V ++ND+ P + Y I EN I+QL A+D D D+++
Sbjct: 213 DGVHTTLTQLLVTVIDINDHRPEFTETTYRVDISENVEKGERILQLHATDE--DEDKKVF 270
Query: 120 YKISAGNPES---YFNIDIGSGSL 140
Y + A ++ F++D GS+
Sbjct: 271 YSLHAAQTQASLEIFHVDSVLGSI 294
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS-GIL----- 100
+FN+ + +++ G +IV+ V + NDN P L +Y +I E S G L
Sbjct: 511 KFFNLTVSATNMAGASATCNVIVH--VLDRNDNAPRFLQALYSGEISEGASIGSLVLTNT 568
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+V + A D D + + ++Y I P YF+ID +G++
Sbjct: 569 SAPLV-IKAEDADSELNALLNYDIVEDLPRKYFHIDSSTGAI 609
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ VQ++NDN P +Y+A++ E + + ++ A+ D + I Y I GN
Sbjct: 1990 VNVQDINDNPPEFASKLYFAKVPEIYAVGTEVARVLATSKDTGVNADIYYSIVGGNEHKK 2049
Query: 131 FNIDIGSGSL 140
F ID +G L
Sbjct: 2050 FQIDAKTGVL 2059
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 46 PESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
PE F + + +D G P V++++++ NDN P +D Y A + E+ +V+
Sbjct: 1657 PEYKFQV-VATD-NGNPKHFARTSVHVKLKDYNDNAPAFVDDRYEATVNEDALPGTVVVK 1714
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNI 133
L D D D + I + I++G+ S F I
Sbjct: 1715 LITVDKDTDVNTPIEFYITSGDSRSQFQI 1743
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 6 VYYAQIVENQSGILPIVQLAA---SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
V YA + E I I +L + LD +++ Y+I + +D GG
Sbjct: 1310 VTYAIMSEMMKEIFEINKLTGEIVTRKKLDREEQKRYEIPV----------MATD--GGG 1357
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+++V +++ + NDN P+ L Y A I N S P +++ A D D D +I Y I
Sbjct: 1358 RSGFVMVRVKIGDENDNAPVFLLREYKATIQGNLSLNTPFLKIRAQDADEDEAAKIVYSI 1417
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ V ++NDN P P Y + E+ + + ASD D D++++Y I GN +
Sbjct: 1160 VWMSVIDMNDNPPKFEQPSYTCFLSEHAERGQFVTVVTASDPDY-VDEKLTYTIVGGNEQ 1218
Query: 129 SYFNIDIGSG 138
+NID +G
Sbjct: 1219 QTYNIDQSTG 1228
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
+D Y A + E+ +V+L D D D + I + I++G+ S F I ++
Sbjct: 1694 VDDRYEATVNEDALPGTVVVKLITVDKDTDVNTPIEFYITSGDSRSQFQIRSTGEVYVAK 1753
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D Y+ V +QV +VNDN P L Y + E +
Sbjct: 1754 SLDRETIDRYELQIVGTDGKYVFETKVTVQVLDVNDNPPYCLRYRYREILSEGSHPGAYV 1813
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D +P+ ++ + ++ N + F++D +G L
Sbjct: 1814 LTVLATDYDDEPNAKLRFYLTGDNNDK-FSLDKETGVL 1850
>gi|395736305|ref|XP_003780611.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Pongo
abelii]
Length = 820
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ + +D P + + V ++NDN P+
Sbjct: 406 TDGALDREQTPEYNVTI----------VATDRGKPPLSSSRSITLYVADINDNAPVFDQT 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSGSL 140
Y +VEN I Q++ASD DL + RISY I A + E SY ++ SG++
Sbjct: 456 SYVVHVVENNPPGASIAQVSASDPDLGLNGRISYSIVASDLEPLALSSYVSVSAQSGAV 514
>gi|148683471|gb|EDL15418.1| mCG114390 [Mus musculus]
Length = 2572
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + V + +Q+ NDN P VY A + E Q + ++Q++A+D D + +I Y I
Sbjct: 1428 QAFTQVTVAIQDWNDNPPRFAQSVYQASVSEGQFYSVHVIQVSATDLDQGLNSQIEYSIV 1487
Query: 124 AGNPESYFNID 134
+GN F ID
Sbjct: 1488 SGNQAGAFRID 1498
>gi|3513312|dbj|BAA32597.1| BH-protocadherin-a [Mus musculus]
Length = 1069
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|395736292|ref|XP_002816064.2| PREDICTED: protocadherin gamma-B2 [Pongo abelii]
Length = 824
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 449 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 508
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 509 LKPREILSYVSVSAQSG 525
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD------- 57
P + + EN + L A D DL+P Y I +GN F + +
Sbjct: 166 PAMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYL 225
Query: 58 ----------------------LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV 93
L GG P + + V I +Q+VNDN P+ Y+A +
Sbjct: 226 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGLMTVNITIQDVNDNQPIFNQSRYFATVP 285
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSL 140
EN + ++Q+ ASD D + + + Y I+ + E F ID +G++
Sbjct: 286 ENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAI 334
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 662 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 709
Query: 89 YAQIVENQ-----SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ + +P+V + A+D D ++SY+I AGN F ID SG +
Sbjct: 710 NVSLKESPPAQTPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEI 766
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 25/138 (18%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD + Y I +G+P+ YF I+ GS T G
Sbjct: 840 ATSGDTAHRSPVRYSIYSGDPDGYFGIEGGSGNIRIARPLDHEAKGQVLLNIQATAGEPP 899
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + EN P+ A D D +++Y +
Sbjct: 900 VYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDSGSSGQVTYSL 959
Query: 123 SAGNPESYFNIDIGSGSL 140
+ F ID SG L
Sbjct: 960 A--RERQLFAIDPRSGHL 975
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 26/148 (17%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--GSDLTGGPDQVYL--------- 67
+P+V + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 726 IPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEIFVTRPDSLSVRTQPTHMLN 785
Query: 68 ---------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+V++ + + P+ Y + E+ + + A+ GD
Sbjct: 786 ISATDGGGLRTGHDAVVFLSIIDALQRPPIFEKARYNYYVKEDIPQGTVVGSVIATSGDT 845
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Y I +G+P+ YF I+ GSG++
Sbjct: 846 AHRSPVRYSIYSGDPDGYFGIEGGSGNI 873
>gi|348582928|ref|XP_003477228.1| PREDICTED: protocadherin gamma-A9-like [Cavia porcellus]
Length = 840
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 28 DGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNVPMTLD 85
DG L+P+ + + + ++ + SD GG + V+IQV + NDN P+
Sbjct: 187 DGTLNPELVLEHALDREEEATHHLVLTASD--GGDPRRSSTVHIQVTVMDTNDNAPVFAQ 244
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSGSLG 141
P+Y +++EN ++ ++ASD D R++Y++ G S F ++ +G +
Sbjct: 245 PIYRVKVLENVPPGTLLLTVSASDPDEGTSGRVTYELRKINGKQSSLFQLNENNGEIS 302
>gi|339263904|ref|XP_003366920.1| putative cadherin domain protein [Trichinella spiralis]
gi|316965203|gb|EFV49987.1| putative cadherin domain protein [Trichinella spiralis]
Length = 2935
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------------- 56
I EN+ + +A S P RI Y I++GN F ID S
Sbjct: 869 IAENKRNTFVTLAVARSSKQA-PFNRIRYSIASGNIGQAFTIDSESGELFTSENIDYETH 927
Query: 57 ----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D P +L +YI V++VNDN P+ +Y I E + + Q+
Sbjct: 928 CHYELWIAAVDNDSPPMISFLKLYINVEDVNDNSPVFNQSIYEVSIPEEEPEFFYVTQVT 987
Query: 107 ASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
A+D D + + I Y I + N F ID SG
Sbjct: 988 ATDLDSENNGLIEYSIDKNQSNVCDLFQIDPTSG 1021
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS---GILPIVQLAASDGDLDPDQRISYKIS 123
L+V I++++VNDN P+ + Y +VEN + I ++ A D D + +I Y I
Sbjct: 531 LVVTIRLKDVNDNSPIFIQNPIYIDVVENTAMDNQFTIIGRIKAIDKDHSHNSQIFYSIV 590
Query: 124 AGNPESYFNIDIGSGSL 140
GN S F ID SG L
Sbjct: 591 QGNT-SIFQIDSASGEL 606
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V + I V +VNDN P+ Y + E +S + I +L A+D D + RI+YK+
Sbjct: 1150 KVMTSLTISVDDVNDNAPVFSKHSYSFYVPETKSIPVLIGRLEATDADSQENSRITYKMY 1209
Query: 124 AGNPESYFNIDIGSGSL 140
+ + S F+ID +G++
Sbjct: 1210 SQS--SQFSIDSVTGAI 1224
>gi|301621400|ref|XP_002940043.1| PREDICTED: hypothetical protein LOC100490327 [Xenopus (Silurana)
tropicalis]
Length = 4900
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 49 YFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++NI I + G P + ++ +++ +VNDN P+ + P Y A + EN I L A
Sbjct: 415 FYNITILATDRGYPQRTSKKMIGVEISDVNDNAPLFIKPTYDAFLPENNLPGALIYSLHA 474
Query: 108 SDGDLDPDQRISYKISAGNPE----SYFNIDIGSGSL 140
D D+ + +++Y I N + SYF+I+I +G L
Sbjct: 475 KDLDVGDNAKVTYSILNTNTDFSVSSYFSINIETGVL 511
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 17 GILPIVQLAASDGDLDPDQRISYKISAGN-----PESYFNIDIGS-DLTGGPDQVYLIVY 70
G +P +L +S G+ YKI N Y+NI I + D P I+
Sbjct: 1208 GTVPF-KLLSSSGNF-------YKIVTTNSLDREKSPYYNITIQAIDRGSPPLTAKKIIR 1259
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ V ++NDN P+ Y A + EN I + A D D + + +++Y I + N E
Sbjct: 1260 LDVSDINDNSPLFEKLTYVAYVPENNQPGASIYSIQAIDKDTEENAKLTYSIISSNTE 1317
>gi|149047189|gb|EDL99858.1| protocadherin 7, isoform CRA_a [Rattus norvegicus]
Length = 1159
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|397517990|ref|XP_003846123.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B2 [Pan
paniscus]
Length = 811
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 495
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 496 LKPREILSYVSVSAQSG 512
>gi|336244973|gb|AEI28404.1| FAT tumor suppressor-like protein 4, partial [Naja atra]
Length = 254
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------TGGPD 63
+ S +D + I+Y I+ G+ + F I+ + L +GG
Sbjct: 25 SVSAHTMDLNINITYLITTGDQKGMFEINKMTGLITTSSIIDREEQAFYQLKAVASGGTI 84
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L V +VEN + I Q A D D + R++Y +
Sbjct: 85 TGDALVNITVRDLNDNSPHFLHAVESVNVVENWNTGHTIFQAKAVDPDEGANGRVAYSLK 144
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F+ID SG++
Sbjct: 145 Q-NPKNLFSIDEQSGAI 160
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 34/152 (22%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------- 53
L V +VEN + I Q A D D + R++Y + NP++ F+ID
Sbjct: 105 LHAVESVNVVENWNTGHTIFQAKAVDPDEGANGRVAYSLKQ-NPKNLFSIDEQSGAISLT 163
Query: 54 --------------IGSDLTGGPDQVY-LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ SDL G P++ I+ + V +VNDN P+ D + Y I+ S
Sbjct: 164 GLLDVNDGSYQVEIMASDL-GVPERSSSFILTVSVHDVNDNPPV-FDQISYEVII---SE 218
Query: 99 ILPI----VQLAASDGDLDPDQRISYKISAGN 126
+ P+ + ASD D + I+Y I GN
Sbjct: 219 LEPVNSRFFSVHASDKDSGTNGEITYNIIEGN 250
>gi|170295851|ref|NP_061234.2| protocadherin 7 isoform 2 precursor [Mus musculus]
gi|124297288|gb|AAI31968.1| Protocadherin 7 [Mus musculus]
gi|148705745|gb|EDL37692.1| protocadherin 7, isoform CRA_d [Mus musculus]
Length = 1069
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|47195087|emb|CAF87206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 490
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ES +NI + G P + + +Q+ +VNDN P+ Y A IVEN + L I +
Sbjct: 402 ESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIVENNTPGLSIFTV 461
Query: 106 AASDGDLDPDQRISY 120
A D D + + R+SY
Sbjct: 462 RARDADWNQNARVSY 476
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 58 LTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG Q+ + + I V + NDN P+ P+Y A I EN + + ASD D +
Sbjct: 202 LDGGEPQMTGTMQILITVLDANDNAPVFTQPIYKASIKENAPVGTLVSTVTASDADHGSN 261
Query: 116 QRISYKIS 123
RI+Y IS
Sbjct: 262 GRITYSIS 269
>gi|410912464|ref|XP_003969709.1| PREDICTED: protocadherin-17-like [Takifugu rubripes]
Length = 1140
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 6 VYYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSDLTGG 61
VYY+ I N SG + V + A++G + Y + + N E YF+ I + G
Sbjct: 488 VYYSIINSNVSGGDVNTYVNVNAANGAI-------YAVRSFNYEQIKYFDFKILAKDAGS 540
Query: 62 PD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE----NQSGILPIVQ-LAASDGDLDPD 115
P + V I + +VNDN+P+ + P+ E G+ IV + A D D
Sbjct: 541 PHLESNTTVRISILDVNDNIPVIVLPILLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES 600
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R++Y+IS GN E F ID +G +
Sbjct: 601 GRLTYEISEGNEEHLFEIDPVTGEV 625
>gi|332023165|gb|EGI63421.1| Cadherin-related tumor suppressor [Acromyrmex echinatior]
Length = 1872
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 21 IVQLAASDGDLDP-DQRISYKISAGNPESYFNID-----------------------IGS 56
++ + A D D+ P + + SY I +GN F +D IG+
Sbjct: 303 VIIVRAIDKDIKPQNNQFSYSIISGNLGQAFKVDPQTGDIETAKQLDRETVSSYDLTIGA 362
Query: 57 DLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
TG P Q +V+I++Q+VNDN P+ P + EN+ I+ L+A+D DL P+
Sbjct: 363 IDTGSPPQTGTAMVHIELQDVNDNGPVFDPPEVIGYVSENEPIGTSIMTLSATDPDLPPN 422
Query: 116 QR-ISYKISAGNPESYFNIDIGSGSL 140
+Y++ G +D SG L
Sbjct: 423 GAPFTYRLIGGRQSDMVTLDKHSGIL 448
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQ 72
+NQ + P+ + D DQ Y++ NI +D+ P QV I+ I
Sbjct: 12 KNQFYVHPVTGVVTRLEPFDYDQVQEYRL---------NI-TATDMGFEPKQVVAILTIH 61
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
V ++NDN P +Y A + EN + ++ A D D + Y+I G + YF
Sbjct: 62 VTDINDNPPTFNQSIYEAFLPENSPPDSFVYKVVARDIDSPKYAIVQYEILGGTGKDYFR 121
Query: 133 IDIGSG 138
I +G
Sbjct: 122 IRGNTG 127
>gi|51345953|gb|AAU01512.1| protocadherin 7a [Rattus norvegicus]
gi|149047191|gb|EDL99860.1| protocadherin 7, isoform CRA_c [Rattus norvegicus]
Length = 1069
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|74150066|dbj|BAE24351.1| unnamed protein product [Mus musculus]
Length = 1069
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
Length = 2531
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + +YI V +VNDNVP +Y A + E ++Q++A+D DL + I+Y
Sbjct: 720 PLAAFTTIYINVTDVNDNVPFFTSSIYEASVTEGADIGTFVIQVSATDLDLGQNGEITYS 779
Query: 122 ISAGNPESY--FNIDIGSGSL 140
+ + Y F +D +GS+
Sbjct: 780 MLHDHSGDYTCFRLDSQTGSI 800
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------- 52
VY + E+Q ++ + A+D D + ++ Y+I+AGN +
Sbjct: 860 VYEVNVDEDQDVGSTVITVNANDEDEGTNAKLRYQITAGNTGGVLGVQPETGAIFIAQPL 919
Query: 53 --------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIV 103
+I + G + Y + I V N ND P+ YY I+E G+ + ++
Sbjct: 920 DYEETKIYEIHLLASDGKWEDYAVTIINVMNKNDESPVFSINEYYGSIIEELDGLPVFVL 979
Query: 104 QLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D + D+ +SY + F ID +GS+
Sbjct: 980 QVMANDPDNNVDEGDLSYSLHGHGAADIFTIDENTGSI 1017
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I + +VND+VP ++ A I EN + I++++A+D D + +++ I G+P+
Sbjct: 1166 IWIADVNDHVPNFTKEMWQAAIPENSAINSEILRVSATDADGGENAHLTFSIIRGDPDQK 1225
Query: 131 FNID 134
F I+
Sbjct: 1226 FYIE 1229
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D Y+ V+I +VNDN P+ VY + E+Q ++ + A+D D + ++ Y+I
Sbjct: 838 DTAYVRVFIT--DVNDNKPVFTQSVYEVNVDEDQDVGSTVITVNANDEDEGTNAKLRYQI 895
Query: 123 SAGN 126
+AGN
Sbjct: 896 TAGN 899
>gi|322789017|gb|EFZ14475.1| hypothetical protein SINV_04268 [Solenopsis invicta]
Length = 411
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y ++ EN+ I+ ++A DGD P+ I Y+ISAGN + F ++
Sbjct: 286 YQVRVPENEPVNTTILTVSAVDGDSGPNGMIRYRISAGNERNEFFVNSTTGAITILEPLD 345
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+DL P QV + + V ++NDN P+ VY A + EN
Sbjct: 346 YDLVQEYRLNITATDLGFEPKQVVATLIVNVSDINDNPPVFNQSVYEAFLPEN 398
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + ++V + + N + P Y ++ EN+ I+ ++A DGD P+ I Y+
Sbjct: 260 PQKDEIVVTLVISGENRHAPTFAADSYQVRVPENEPVNTTILTVSAVDGDSGPNGMIRYR 319
Query: 122 ISAGNPESYFNIDIGSGSL 140
ISAGN + F ++ +G++
Sbjct: 320 ISAGNERNEFFVNSTTGAI 338
>gi|363738275|ref|XP_425119.3| PREDICTED: neural-cadherin-like [Gallus gallus]
Length = 2503
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + +YI + +VNDNVP +Y A + E ++Q++A+D DL + I+Y
Sbjct: 709 PLAAFTTIYINITDVNDNVPFFTSSIYEASVTEGAGIGTFVIQVSATDLDLGQNGEITYS 768
Query: 122 I--SAGNPESYFNIDIGSGSL 140
+ G + F +D +GS+
Sbjct: 769 LLHDHGGDYTCFRLDSQTGSI 789
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------- 52
VY +VE+Q I+ ++A+D D + ++ Y+I+AGN +
Sbjct: 849 VYEVNVVEDQDVGSTIITVSANDEDEGTNAKLRYQITAGNTGGVLGVQPETGAIFIAQPL 908
Query: 53 --------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIV 103
+I + G + Y + I V N ND P+ YY I+E G+ + ++
Sbjct: 909 DYEETKMYEIHLLASDGKWEDYAVTIINVMNKNDESPVFSINEYYGSIIEELDGLPVFVL 968
Query: 104 QLAASDGDLDPDQ-RISYKISAGNPESYFNIDIGSGSL 140
Q+ A+D D + ++ +SY + F ID +GS+
Sbjct: 969 QVMANDPDNNVEEGDLSYSLHGHGAADIFTIDENTGSI 1006
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D Y+ V+I +VNDN P+ VY +VE+Q I+ ++A+D D + ++ Y+I
Sbjct: 827 DTAYVRVFIT--DVNDNKPVFTQSVYEVNVVEDQDVGSTIITVSANDEDEGTNAKLRYQI 884
Query: 123 SAGN 126
+AGN
Sbjct: 885 TAGN 888
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I + +VND+VP ++ A I EN + I++++A+D D + +++ I G+P+
Sbjct: 1155 IWIADVNDHVPNFTKEMWQAAIPENSAINSEILRVSATDADGGENAHLTFSIIRGDPDQK 1214
Query: 131 FNID 134
F I+
Sbjct: 1215 FYIE 1218
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P + P Y A + E++ P++Q+ A D D P +ISY ++A
Sbjct: 2150 AFSVLTLTLQDANDNAPRFVRPQYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAA 2209
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2210 SQPARGLFHVD 2220
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2563 TQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPEDTPVGAELLHVE 2622
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2623 ASDADPGPHGLVRFTLSSGDPSGLFELDENSGAL 2656
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--NPESY-FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG P S F ID +
Sbjct: 580 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGAPGSPPFRIDAHTGDVCTTR 639
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 640 TLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPWEYAASLSAQSTPGT 699
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R++Y I AGN F +D SG L
Sbjct: 700 AVLRVRAHDPDQGPHGRLTYHILAGNNPPLFALDEHSGLL 739
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2351 GPHEGHANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGHISY 2410
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F++D +G+L
Sbjct: 2411 HLA--SPAEGFSVDPNNGTL 2428
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 28/143 (19%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------------------SD 57
+ + A D DL R+SY+++AG + YF + G SD
Sbjct: 1562 LHVVARDPDLGEAARVSYRLAAGG-DGYFRLHSGTGALSVVRSLDREQRAEHLLTVVASD 1620
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++ + V +VND P Y + EN ++ L A+D DL + +
Sbjct: 1621 HGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ 1680
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
++Y +G F++D +G L
Sbjct: 1681 VTYGGISGE---SFSLDPDTGVL 1700
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 200 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 248
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 249 APAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHT 308
Query: 138 GSL 140
G L
Sbjct: 309 GLL 311
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
E F + I + G P L+V + V + ND+ P P Y ++ E+ ++QL
Sbjct: 1815 EPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQL 1874
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + R++Y + G F ++ SG L
Sbjct: 1875 QAHDPDAGANGRVTYYLGTGA-AGAFLLEPSSGEL 1908
>gi|348563331|ref|XP_003467461.1| PREDICTED: protocadherin-7-like isoform 3 [Cavia porcellus]
Length = 1256
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|301767532|ref|XP_002919186.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Ailuropoda
melanoleuca]
Length = 1207
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 217 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 266
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 267 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 320
>gi|156379093|ref|XP_001631293.1| predicted protein [Nematostella vectensis]
gi|156218331|gb|EDO39230.1| predicted protein [Nematostella vectensis]
Length = 4354
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 9 AQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNIDIGSDL--------- 58
A+++EN+ ++ + A D D +P +R++Y++ NP F ID + +
Sbjct: 2579 ARVLENKPAPTKVISMKAIDDDGSEPHRRVTYEMK-DNPN--FQIDASTGMITTKTTLDR 2635
Query: 59 ------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
G ++ I+YI V + ND P+ Y + E+ ++ +
Sbjct: 2636 EVTPKYDVEVTAKDGVNKESAILYITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIY 2695
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNI 133
A+D D+ + +I+Y IS G+PE F+I
Sbjct: 2696 ATDADVGENAKITYFISKGDPEGKFSI 2722
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI--GSDLTGG 61
+ Y + EN ++++ A+D D+ P+ + + GN F ID G+ L G
Sbjct: 2994 EKFYRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHAFYIDPFNGTVLVSG 3053
Query: 62 -----PDQVYLI-------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ Y I V I++ + NDN P + +Y A ++E+
Sbjct: 3054 ILDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEFIPKIYNASVLEDVG 3113
Query: 98 GILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNID 134
P++ + A D D P+ ++ I +P+ F I+
Sbjct: 3114 ARQPVLTVTAVDKDSGPNGNFTFAIDPRSDPDDAFTIE 3151
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 5 PVYYAQIVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI----------- 52
P YA V S I ++ + A+D D+ + +I+Y IS G+PE F+I
Sbjct: 2674 PKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTSPVKGELVV 2733
Query: 53 ------------DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ T G +V + +Q+VND P+ P+Y ++I EN
Sbjct: 2734 NGKLDFETKSSYTLEVTATDGKFSDTAVVTVTIQDVNDLPPVFSSPLYESRIQENTGPGA 2793
Query: 101 PIVQLAASDGD 111
+V + ASD D
Sbjct: 2794 GVVMVTASDID 2804
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 31/146 (21%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----IGSDLT------- 59
I EN I QL A+D D + +I+Y I + ++ F+I+ + LT
Sbjct: 2256 IRENDPRDTKITQLTATDADRGQNGQITYSIEDASSQTLFSIEPRTGVVRSLTSLDRENK 2315
Query: 60 -----------GGPDQ-------VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G Q Y + I V++VNDN P L Y+ + +
Sbjct: 2316 DSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSN 2375
Query: 102 IVQLAASDGDLDPDQRISYKI--SAG 125
I+ + A+D D + +I Y + SAG
Sbjct: 2376 ILTVQATDADSGSNAKIKYALLDSAG 2401
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V + ND+ P + Y + EN ++++ A+D D+ P+ + + GN
Sbjct: 2980 IHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHA 3039
Query: 131 FNIDIGSGSL 140
F ID +G++
Sbjct: 3040 FYIDPFNGTV 3049
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 30/145 (20%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNID--------------------- 53
ILP V A D D + +I Y I +G + + YFNID
Sbjct: 1337 ILPPV--IAVDHDFGSNGKILYSILSGVHPDWDKYFNIDSATGKITTKMTLDYETHKSHT 1394
Query: 54 --IGSDLTGGPDQVYLI--VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
I ++ G P ++ I V I V + NDN P+ Y A+I ++Q+ A+D
Sbjct: 1395 LFIRAEDNGSPKRLSGIAQVDIDVIDRNDNSPVFAAAFYRAKISLGAVKGTSVLQVHATD 1454
Query: 110 GDLDPDQRISYKISAGNPESYFNID 134
D + +I+Y I GN E F I+
Sbjct: 1455 LDSGQNGQITYSIIQGNEEEAFTIN 1479
>gi|149017355|gb|EDL76406.1| rCG49295, isoform CRA_ap [Rattus norvegicus]
Length = 553
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++ ID+ SD P +L + + + +VNDN P +Y A I EN+ + +A
Sbjct: 89 SHYTIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVA 148
Query: 107 ASDGDLDPDQRISYKISA----GNPESYF 131
ASD D + R++Y I G P S F
Sbjct: 149 ASDPDEGDNARLTYSIVGSQIQGAPASSF 177
>gi|126290997|ref|XP_001377806.1| PREDICTED: protocadherin gamma-B2-like [Monodelphis domestica]
Length = 889
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ +D P + + +VNDN P+ L P
Sbjct: 406 TDGTLDREQTPEYNITV----------TATDKGTPPLSTSKTFILHIADVNDNAPVFLQP 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
Y A + EN I ++A D DL+ + R+SY I
Sbjct: 456 SYVAYVTENNPSGASISCVSAVDPDLEHNGRLSYSI 491
>gi|51345976|gb|AAU01513.1| protocadherin 7b [Rattus norvegicus]
Length = 1094
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|426344007|ref|XP_004038569.1| PREDICTED: protocadherin-7 isoform 1 [Gorilla gorilla gorilla]
Length = 1255
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|291084612|ref|NP_001166994.1| protocadherin-7 isoform d precursor [Homo sapiens]
Length = 1255
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|256220048|ref|NP_001157760.1| protocadherin gamma-C5 [Rattus norvegicus]
gi|239919014|gb|ACS34823.1| protocadherin gamma C5 [Rattus norvegicus]
Length = 944
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++ ID+ SD P +L + + + +VNDN P +Y A I EN+ + +A
Sbjct: 418 SHYTIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVA 477
Query: 107 ASDGDLDPDQRISYKISA----GNPESYF 131
ASD D + R++Y I G P S F
Sbjct: 478 ASDPDEGDNARLTYSIVGSQIQGAPASSF 506
>gi|390460960|ref|XP_003732567.1| PREDICTED: protocadherin-7 isoform 2 [Callithrix jacchus]
Length = 1255
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|348563333|ref|XP_003467462.1| PREDICTED: protocadherin-7-like isoform 4 [Cavia porcellus]
Length = 1248
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|114593506|ref|XP_517139.2| PREDICTED: protocadherin-7 isoform 4 [Pan troglodytes]
gi|410223664|gb|JAA09051.1| protocadherin 7 [Pan troglodytes]
gi|410253300|gb|JAA14617.1| protocadherin 7 [Pan troglodytes]
gi|410296944|gb|JAA27072.1| protocadherin 7 [Pan troglodytes]
Length = 1247
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|2979418|dbj|BAA25194.1| PCDH7 (BH-Pcdh)a [Homo sapiens]
Length = 1069
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|410957824|ref|XP_003985524.1| PREDICTED: protocadherin-7 isoform 4 [Felis catus]
Length = 1244
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 261 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 310
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 311 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 364
>gi|410957820|ref|XP_003985522.1| PREDICTED: protocadherin-7 isoform 2 [Felis catus]
Length = 1234
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 243 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 292
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 293 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 346
>gi|403255748|ref|XP_003920573.1| PREDICTED: protocadherin gamma-B3 [Saimiri boliviensis boliviensis]
Length = 816
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ +D P + + + +VNDNVP+
Sbjct: 406 TDGALDREQIPEYNVTI----------TATDKGNPPLSSSKTITLYILDVNDNVPVFHQA 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y ++ EN I Q++ASD DL P+ +SY I A + E SY +++ SG
Sbjct: 456 SYMVRVAENNLPGASIAQVSASDPDLGPNGHVSYSIVASDLEPHELSSYVSVNAQSG 512
>gi|395853835|ref|XP_003799406.1| PREDICTED: protocadherin-7 isoform 2 [Otolemur garnettii]
Length = 1255
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|387540098|gb|AFJ70676.1| protocadherin-7 isoform d precursor [Macaca mulatta]
Length = 1255
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|332030997|gb|EGI70623.1| Protein dachsous [Acromyrmex echinatior]
Length = 680
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + +L V + VQ+VNDN P+ Y A + EN + P++ + A+D D +
Sbjct: 266 LDGGTPPLRSHLNVNVTVQDVNDNPPVFNQTRYDANVPENATVGTPVLAVNATDADAGDN 325
Query: 116 QRISYKIS--AGNPESYFNIDIGSG 138
RI Y I+ + E F ID +G
Sbjct: 326 GRIEYSINRRQSDREEMFRIDPETG 350
>gi|397513169|ref|XP_003826895.1| PREDICTED: protocadherin-7 isoform 2 [Pan paniscus]
Length = 1194
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 203 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 252
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 253 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 306
>gi|157649927|gb|ABV59352.1| protocadherin nu5 [Callorhinchus milii]
Length = 977
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P + I+ ++V ++NDNVP P+Y AQ++EN I + A D DL+ + ++SY
Sbjct: 431 PLTTHKIIQLEVSDINDNVPRFSQPLYTAQVMENNLVGASIFSVTAFDPDLNQNAQLSYS 490
Query: 122 I 122
I
Sbjct: 491 I 491
>gi|426344009|ref|XP_004038570.1| PREDICTED: protocadherin-7 isoform 2 [Gorilla gorilla gorilla]
Length = 1247
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|395853837|ref|XP_003799407.1| PREDICTED: protocadherin-7 isoform 3 [Otolemur garnettii]
Length = 1247
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|390460962|ref|XP_002745971.2| PREDICTED: protocadherin-7 isoform 1 [Callithrix jacchus]
Length = 1247
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|354493663|ref|XP_003508959.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Cricetulus
griseus]
Length = 1255
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|332819253|ref|XP_003310324.1| PREDICTED: protocadherin-7 [Pan troglodytes]
gi|410223658|gb|JAA09048.1| protocadherin 7 [Pan troglodytes]
gi|410253296|gb|JAA14615.1| protocadherin 7 [Pan troglodytes]
gi|410296940|gb|JAA27070.1| protocadherin 7 [Pan troglodytes]
gi|410296946|gb|JAA27073.1| protocadherin 7 [Pan troglodytes]
Length = 1255
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|195369899|ref|XP_002045856.1| GM16085 [Drosophila sechellia]
gi|194121585|gb|EDW43628.1| GM16085 [Drosophila sechellia]
Length = 214
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 29 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 76
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 77 KVSLRESPKAPSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 133
>gi|149017354|gb|EDL76405.1| rCG49295, isoform CRA_ao [Rattus norvegicus]
Length = 615
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++ ID+ SD P +L + + + +VNDN P +Y A I EN+ + +A
Sbjct: 89 SHYTIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVA 148
Query: 107 ASDGDLDPDQRISYKISA----GNPESYF 131
ASD D + R++Y I G P S F
Sbjct: 149 ASDPDEGDNARLTYSIVGSQIQGAPASSF 177
>gi|2979420|dbj|BAA25195.1| PCDH7 (BH-Pcdh)b [Homo sapiens]
Length = 1072
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|431897173|gb|ELK06435.1| Protocadherin-7 [Pteropus alecto]
Length = 1070
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|397513173|ref|XP_003826897.1| PREDICTED: protocadherin-7 isoform 4 [Pan paniscus]
Length = 1197
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 203 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 252
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 253 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 306
>gi|190336627|gb|AAI62461.1| Pcdh1g9 protein [Danio rerio]
Length = 891
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I + +G P + ++V +VNDN P VY A I EN S L I L+A
Sbjct: 430 YNITITATDSGSPALSSQKTLNLKVSDVNDNPPRFQKSVYTAFITENNSPGLSIFTLSAK 489
Query: 109 DGDLDPDQRISYKIS----AGNPESYF 131
D D + + RISY + G+P S F
Sbjct: 490 DDDWNQNARISYLLEDTSVGGSPVSSF 516
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNPESYF---NIDIG--- 55
VY A I EN S L I L+A D D + + RISY + G+P S F N D G
Sbjct: 468 VYTAFITENNSPGLSIFTLSAKDDDWNQNARISYLLEDTSVGGSPVSSFISVNADSGVVH 527
Query: 56 -------------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-----YYAQ 91
D P + + I +Q+ NDN P L PV A+
Sbjct: 528 ALRGFDYEQMKSVQVCVKAQDGGSPPLSTNVTLDIIIQDQNDNAPQVLYPVQTGASVVAE 587
Query: 92 IVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV + + + ++ A D D + +SYK+ ++ F + + +G +
Sbjct: 588 IVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAADKALFEVGLQNGEI 637
>gi|291084609|ref|NP_115833.2| protocadherin-7 isoform c precursor [Homo sapiens]
Length = 1247
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|127138947|ref|NP_001076031.1| protocadherin gamma-B2 precursor [Pan troglodytes]
Length = 931
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 495
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + +GN S ID LTG D+ + Y
Sbjct: 20 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 79
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 80 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 139
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 140 VRYGIVGGNTHQEFRIDSVTGAI 162
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 553 PFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 611
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 612 IVNGNQESSFTINHATGEI 630
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID +G T G
Sbjct: 1104 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNMGVITTQGFLD 1162
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 1163 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAV 1222
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 1223 GEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQI 1260
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 893 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSL 952
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q +LI V+I V N + P A I E+ S
Sbjct: 953 VSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSV 1012
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY I++GN E F I+ +G
Sbjct: 1013 VRTVSARDRDTAMNGLISYNITSGNEEGIFAINSSTG 1049
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A I E+ S + ++A D D + ISY I++GN E F I+ + +
Sbjct: 1001 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNITSGNEEGIFAINSSTGVVTLAKALDYE 1060
Query: 60 -------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG Y + + V +VNDN P+ + ++ ++EN ++
Sbjct: 1061 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIH 1120
Query: 105 LAASDGDLDPDQRISYKISAGNPESY 130
L A+D D + I+Y + + + + +
Sbjct: 1121 LNATDADSGANAVIAYTVQSSDSDLF 1146
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ ++ Y+I GN ES F I+
Sbjct: 577 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIR 634
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I + + NDN P ++ A + EN
Sbjct: 635 PLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPR-FSQIFSAYVSENSPLG 693
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 694 YTVTRVTTSDEDI 706
>gi|66773380|ref|NP_001019280.1| protocadherin 1 gamma 9 [Danio rerio]
gi|50881574|gb|AAT85367.1| protocadherin cluster 1 gamma 9 [Danio rerio]
Length = 890
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I + +G P + ++V +VNDN P VY A I EN S L I L+A
Sbjct: 430 YNITITATDSGSPALSSQKTLNLKVSDVNDNPPRFQKSVYTAFITENNSPGLSIFTLSAK 489
Query: 109 DGDLDPDQRISYKIS----AGNPESYF 131
D D + + RISY + G+P S F
Sbjct: 490 DDDWNQNARISYLLEDTSVGGSPVSSF 516
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS----AGNPESYF---NIDIG--- 55
VY A I EN S L I L+A D D + + RISY + G+P S F N D G
Sbjct: 468 VYTAFITENNSPGLSIFTLSAKDDDWNQNARISYLLEDTSVGGSPVSSFISVNADSGVVH 527
Query: 56 -------------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-----YYAQ 91
D P + + I +Q+ NDN P L PV A+
Sbjct: 528 ALRGFDYEQMKSVQVCVKAQDGGSPPLSTNVTLDIIIQDQNDNAPQVLYPVQTGASVVAE 587
Query: 92 IVENQSGI-LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV + + + ++ A D D + +SYK+ + F + + +G +
Sbjct: 588 IVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAADRALFEVGLQNGEI 637
>gi|47207230|emb|CAF92015.1| unnamed protein product [Tetraodon nigroviridis]
Length = 753
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 47 ESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ES +NI + G P + + +Q+ +VNDN P+ Y A IVEN + L I +
Sbjct: 399 ESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIVENNTPGLSIFTV 458
Query: 106 AASDGDLDPDQRISY 120
A D D + + R+SY
Sbjct: 459 RARDADWNQNARVSY 473
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS--AGN 126
+++ V +VNDN P+ PVY A + EN I +++ASD D + +I+Y IS A +
Sbjct: 212 IHVTVLDVNDNAPVFTKPVYKATVPENALIGTLITKVSASDADKGLNSKITYTISSTAAD 271
Query: 127 PESYFNIDIGSGSL 140
F ++ +G+L
Sbjct: 272 VRDMFEMNESNGNL 285
>gi|410957822|ref|XP_003985523.1| PREDICTED: protocadherin-7 isoform 3 [Felis catus]
Length = 1226
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 243 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 292
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 293 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 346
>gi|345798476|ref|XP_545961.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7 [Canis lupus
familiaris]
Length = 1261
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 278 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 327
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 328 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 381
>gi|301753507|ref|XP_002912640.1| PREDICTED: protocadherin gamma-B3-like [Ailuropoda melanoleuca]
Length = 820
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P+ Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 438 VLLNIIDVNDNAPVFGQAFYLVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLE 497
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 498 PRALASYVSVSAQSG 512
>gi|47207213|emb|CAF91492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1582
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+++ V +VNDN P+ + PVY A I EN + +++A+D D + +SY +S+
Sbjct: 201 IFVTVLDVNDNAPVFVQPVYKAAIAENSQKGTTLTRVSATDADKGRNGEVSYSVSS 256
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ + V + NDN P+ PVY I EN + + ++ASD D D + +I+Y I+
Sbjct: 1402 ILVTVLDANDNAPVFTQPVYKGSIAENAAKGTIVTSVSASDNDHDLNSKITYSIT 1456
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
+++ +VNDN P+ Y A IVEN S L I + A D D + R+SY
Sbjct: 800 LEISDVNDNAPVFERSSYQAYIVENNSPGLSIFTVRARDADWSQNARVSY 849
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 72 QVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
++ +VNDN P+ Y A IVEN + L I + A D D + + R+SY
Sbjct: 437 RISDVNDNAPVFERSSYQAYIVENNTPGLSIFTVRARDADWNQNARVSY 485
>gi|397513171|ref|XP_003826896.1| PREDICTED: protocadherin-7 isoform 3 [Pan paniscus]
Length = 1208
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 203 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 252
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 253 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 306
>gi|397513167|ref|XP_003826894.1| PREDICTED: protocadherin-7 isoform 1 [Pan paniscus]
Length = 1186
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 203 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 252
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 253 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 306
>gi|340382647|ref|XP_003389830.1| PREDICTED: protocadherin Fat 4-like [Amphimedon queenslandica]
Length = 2964
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLA 106
+ + IG+ G P+Q +I V+I ++++NDN P+ VY I+ N++ ++P ++L
Sbjct: 793 YMLTIGAFNPGVPNQEGIIHVFIAIEDINDNRPVFTQSVY--NILLNETQLVPHLALELT 850
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNI--DIGSGSL 140
A+D D + R+ Y I +GN E+ F + + G G L
Sbjct: 851 ANDPDRNDQGRLVYAILSGNTEATFQLRNNAGKGEL 886
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V +++ + NDN P + P YA++ EN++ ++QL A+D D + I + + +GN +
Sbjct: 1124 VIVEISDHNDNQPSWVYPYMYARVYENEALGHVVIQLPATDPDNGVNATIFFTLISGNDD 1183
Query: 129 SYFNIDIGSGSL 140
+ FN+ +G +
Sbjct: 1184 NKFNLTASTGEV 1195
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 28/157 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P YA++ EN++ ++QL A+D D + I + + +GN ++ FN+ +
Sbjct: 1141 PYMYARVYENEALGHVVIQLPATDPDNGVNATIFFTLISGNDDNKFNLTASTGEVRVAGS 1200
Query: 57 -DLTGGPDQVYLIVY-----------------IQVQNVNDNVPMTLDPVYYAQIV--ENQ 96
D ++ YL+ + +++ ++DN L +Y+ IV E+
Sbjct: 1201 LDYENLAERRYLLYFSIMDGGSPPLSSPNVGELEIHVLDDNDHSPLFDTHYSTIVLPEDT 1260
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L A+D D + +SY IS G+ FN+
Sbjct: 1261 PINAHLITLTATDTDQGTNSLLSYGISDGDSNHDFNL 1297
>gi|402869111|ref|XP_003898613.1| PREDICTED: protocadherin-7 isoform 2 [Papio anubis]
Length = 1072
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur garnettii]
Length = 3374
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + + +VNDN P+ Y + E+ ++ +
Sbjct: 2642 TQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDTPVGAELLHVE 2701
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2702 ASDADPGPHGLVRFTLSSGDPSGLFELDESSGTL 2735
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 62/158 (39%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 659 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDSHSGDVCTTR 718
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 719 TLDHDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPGT 778
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D P R+SY I AGN F +D SG
Sbjct: 779 AVLRVRAHDPDQGPHGRLSYHILAGNSPPLFTLDEHSG 816
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D +ISY ++A
Sbjct: 2229 AFSVLTLTLQDANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAA 2288
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2289 SQPARGLFHVD 2299
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1772 LDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPQLTHVTVRVAVEDENDHTPTFGSAH 1831
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1832 LSLEVPEGQDPQT-LTVLRASDPDMGANGQLQYRILDGDPSGAFVLDLDSGEFG 1884
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD----------------------L 58
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 568 VVRVTARDPDQGTNGQVTYSLAPGAHTHWFSIDPTSGIITTSALLDYELEPQPQLIVVAM 627
Query: 59 TGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 628 DGGLPPLSSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 687
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 688 LLSYSLGAGLGASGSPPFRIDSHSG 712
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2430 GPHEGCANLTVLVEDVNDNAPAFSQSLYQVTLLEHTPPGSAIISVSATDRDSGANGHISY 2489
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P + F++D +G+L
Sbjct: 2490 HLA--SPAAGFSVDPNNGTL 2507
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-------------------- 63
L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1848 LRASDPDMGANGQLQYRILDGDPSGAFVLDLDSGEFGTMRPLDREVEPAFQLRIEARDGG 1907
Query: 64 ----QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
L+V + V + ND+ P P Y ++ E+ ++QL A D D + R++
Sbjct: 1908 QPALSATLLVTVTVLDANDHAPAFPVPTYSVEVPEDVPAGTLLLQLQAHDPDAGANGRVT 1967
Query: 120 YKISAGNPESYFNIDIGSGSL 140
Y + G ++ ++ SG L
Sbjct: 1968 YYLGTGTAGAFL-LEPSSGEL 1987
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ I + ++ND+
Sbjct: 279 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDITLLDINDH 327
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 328 APAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHT 387
Query: 138 GSL 140
G L
Sbjct: 388 GLL 390
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 28/143 (19%)
Query: 22 VQLAASDGDLDPDQRISYKISAGNPESYFNID------------------------IGSD 57
+ + A D DL R+SY+++AG + +F + + SD
Sbjct: 1641 LHVVARDLDLGEAARVSYRLAAGG-DGHFRLHSSTGALSVVRPLDREQQAEHILTVVASD 1699
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
P ++ I V +VND P Y + EN ++ L A+D DL + +
Sbjct: 1700 HGSPPRSATQVLTISVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPDLGANGQ 1759
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
++Y +G F++D +G L
Sbjct: 1760 VTYGGVSGE---NFSLDPDTGVL 1779
>gi|119625347|gb|EAX04942.1| dachsous 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 3371
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 2223 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 2282
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 2283 SGNQEEAFQIDALSG 2297
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 2246 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 2305
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 2306 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 2364
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 2365 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 2400
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 1267 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 1326
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 1327 EGNNAEVTYSVSSEDSSDHFKIDANSGEI 1355
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2636 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2695
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2696 SHAEIIYNIISGNEKGHFYLEENTGVL 2722
>gi|47059046|ref|NP_060109.2| protocadherin-23 isoform 1 [Homo sapiens]
gi|74762378|sp|Q6V1P9.1|PCD23_HUMAN RecName: Full=Protocadherin-23; AltName: Full=Cadherin-27; AltName:
Full=Cadherin-like protein CDHJ; AltName:
Full=Cadherin-like protein VR8; AltName: Full=Protein
dachsous homolog 2; AltName: Full=Protocadherin PCDHJ
gi|38049487|gb|AAR10443.1| cadherin protein [Homo sapiens]
Length = 2916
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1768 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1827
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1828 SGNQEEAFQIDALSG 1842
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1791 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1850
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1851 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1909
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1910 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1945
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2181 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2240
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2241 SHAEIIYNIISGNEKGHFYLEENTGVL 2267
>gi|14589931|ref|NP_002580.2| protocadherin-7 isoform a precursor [Homo sapiens]
gi|254763320|sp|O60245.2|PCDH7_HUMAN RecName: Full=Protocadherin-7; AltName: Full=Brain-heart
protocadherin; Short=BH-Pcdh; Flags: Precursor
gi|119613271|gb|EAW92865.1| BH-protocadherin (brain-heart), isoform CRA_e [Homo sapiens]
Length = 1069
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|426344013|ref|XP_004038572.1| PREDICTED: protocadherin-7 isoform 4 [Gorilla gorilla gorilla]
Length = 1072
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|195342413|ref|XP_002037795.1| GM18105 [Drosophila sechellia]
gi|194132645|gb|EDW54213.1| GM18105 [Drosophila sechellia]
Length = 1207
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + EN+ I+ + A+DGD P+ + Y IS GN F++D + TGG
Sbjct: 86 YQVIVPENEPVGSTILTVGATDGDTGPNGMLRYSISGGNERQDFSVD---ERTGGIVIQQ 142
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P ++ I + +VNDN P+ Y+ I EN+
Sbjct: 143 QLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPAG 202
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ Q A+D D + I Y P+ +F I
Sbjct: 203 TFVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFI 236
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S +N+ IG+ TG P Q V+I++++VNDN P I EN+ I+ L
Sbjct: 467 STYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLM 526
Query: 107 ASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
ASD DL + +Y++ G +S+ ++D +G
Sbjct: 527 ASDPDLPRNGGPFTYQLVGGKHKSWLSVDKNTG 559
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+ I EN+ + Q A+D D + I Y P+ +F I S+ T
Sbjct: 191 YHCYIPENKPAGTFVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSF 250
Query: 60 --------------GGPD---QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD + Y +Y+ V VN+ P L PV++ + E + +
Sbjct: 251 DYEERRIYTLQIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRV 310
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+D D D R+ Y + + + F ID +G
Sbjct: 311 GAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTG 346
>gi|14589933|ref|NP_115832.1| protocadherin-7 isoform b precursor [Homo sapiens]
gi|119613268|gb|EAW92862.1| BH-protocadherin (brain-heart), isoform CRA_b [Homo sapiens]
Length = 1072
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|395504786|ref|XP_003756728.1| PREDICTED: protocadherin gamma-B7 [Sarcophilus harrisii]
Length = 807
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y I+ I +D P + + + ++NDN P+ L P
Sbjct: 407 TDGALDREQIPEYNITL----------IATDKGNPPLYNSKTLTLHIADINDNAPIFLQP 456
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
Y A I EN I +++A D DL+ + R+SY I
Sbjct: 457 YYVAYIPENNPSGSSITRVSAYDADLEENGRVSYFI 492
>gi|345793783|ref|XP_003433805.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B4 [Canis lupus
familiaris]
Length = 810
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-- 128
+ + +VNDN P+ Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 438 LHIGDVNDNAPVFQQASYVVHVAENNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPR 497
Query: 129 ---SYFNIDIGSG 138
SY ++ SG
Sbjct: 498 ALASYVSVSAQSG 510
>gi|339242823|ref|XP_003377337.1| putative cadherin domain protein [Trichinella spiralis]
gi|316973874|gb|EFV57418.1| putative cadherin domain protein [Trichinella spiralis]
Length = 3005
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------------- 56
I EN+ + +A S P RI Y I++GN F ID S
Sbjct: 1018 IAENKRNTFVTLAVARSSKQA-PFNRIRYSIASGNIGQAFTIDSESGELFTSENIDYETH 1076
Query: 57 ----------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
D P +L +YI V++VNDN P+ +Y I E + + Q+
Sbjct: 1077 CHYELWIAAVDNDSPPMISFLKLYINVEDVNDNSPVFNQSIYEVSIPEEEPEFFYVTQVT 1136
Query: 107 ASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
A+D D + + I Y I + N F ID SG
Sbjct: 1137 ATDLDSENNGLIEYSIDKNQSNVCDLFQIDPTSG 1170
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS---GILPIVQLAASDGDLDPDQRISYKIS 123
L+V I++++VNDN P+ + Y +VEN + I ++ A D D + +I Y I
Sbjct: 680 LVVTIRLKDVNDNSPIFIQNPIYIDVVENTAMDNQFTIIGRIKAIDKDHSHNSQIFYSIV 739
Query: 124 AGNPESYFNIDIGSGSL 140
GN S F ID SG L
Sbjct: 740 QGNT-SIFQIDSASGEL 755
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V + I V +VNDN P+ Y + E +S + I +L A+D D + RI+YK+
Sbjct: 1299 KVMTSLTITVDDVNDNAPVFSKHSYSFYVPETKSIPVLIGRLEATDADSQENSRITYKMY 1358
Query: 124 AGNPESYFNIDIGSGSL 140
+ + S F+ID +G++
Sbjct: 1359 SQS--SQFSIDSVTGAI 1373
>gi|338723487|ref|XP_001917378.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7 [Equus caballus]
Length = 1138
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 147 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 196
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 197 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 250
>gi|347300200|ref|NP_001231413.1| protocadherin-7 precursor [Sus scrofa]
Length = 1248
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|114593512|ref|XP_001134665.1| PREDICTED: protocadherin-7 isoform 1 [Pan troglodytes]
gi|410223662|gb|JAA09050.1| protocadherin 7 [Pan troglodytes]
Length = 1072
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|197100101|ref|NP_001124892.1| protocadherin gamma-C5 precursor [Pongo abelii]
gi|55726265|emb|CAH89904.1| hypothetical protein [Pongo abelii]
Length = 945
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 48 SYFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S++ I++ SD P +L + + + +VNDN P +Y A I+EN+ + +A
Sbjct: 418 SHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPRFNQQLYTAYILENRPPGSLLCTVA 477
Query: 107 ASDGDLDPDQRISYKISA----GNPESYF 131
ASD D+ + R++Y I G P S F
Sbjct: 478 ASDPDIGDNARLTYSIVGNQVQGAPASSF 506
>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
Length = 3197
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 48 SYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+ +N+ + + G P + + V + V +VNDN P+ Y + E+ ++ +
Sbjct: 2465 TQYNLTVAAADRGQPSRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVE 2524
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D P + + +S+G+P F +D SG+L
Sbjct: 2525 ASDADPGPHGLVRFTLSSGDPLGLFELDESSGAL 2558
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D +ISY ++A
Sbjct: 2052 AFSVLTLTLQDTNDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAA 2111
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2112 SQPARGLFHVD 2122
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 579 YNASLPEGTQPGSCFLQVTATDADSGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTTR 638
Query: 57 -----------DLT-----GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
D T GG + + V + V + NDN P Y A + +
Sbjct: 639 ILDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPWEYAASLSAQSTPGT 698
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A D D P R+SY I AGN F +D SG L
Sbjct: 699 AVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLL 738
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------------- 53
A++ E+Q + L A D DL R+SY+++AG + +F +
Sbjct: 1451 ARLPEDQPSGPVALHLVARDPDLGEAARVSYRLAAGG-DGHFRLHSSTGALSVVRPLDRE 1509
Query: 54 ---------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+ SD P ++ + V +VND P Y + EN ++
Sbjct: 1510 QRAEHILTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFQQQDYSVLLRENSPPGTSLLT 1569
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L A+D DL P+ +++Y +G F++D +G L
Sbjct: 1570 LRATDPDLGPNGQVTYGGVSGE---NFSLDPKTGVL 1602
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 488 VVRVTARDPDQGTNGQVTYSLAPGTHTHWFSIDPTSGIITTAASLDYELEPRPQLIVVAT 547
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 548 DGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGSCFLQVTATDADSGPFG 607
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 608 LLSYSLGAGLGASGPPPFRIDAHSG 632
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2253 GPHKGQANLTVLVEDVNDNAPTFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGHISY 2312
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P FN+D +G+L
Sbjct: 2313 HLA--SPAEGFNVDPNNGTL 2330
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISY------------------KISAGNPES 48
Y + EN ++ L A+D DL P+ +++Y + A + E
Sbjct: 1553 YSVLLRENSPPGTSLLTLRATDPDLGPNGQVTYGGVSGENFSLDPKTGVLTTLRALDREE 1612
Query: 49 YFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
I++ D P ++ V + +++ ND+ P + ++ E Q + L
Sbjct: 1613 QEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPTFGNAHLSLEVPEGQDPQT-LTTL 1671
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1672 RASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFG 1707
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD----------------- 63
+ L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1668 LTTLRASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFGTRRPLDREVEPAFQLRIEAR 1727
Query: 64 -------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
++V + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1728 DGGQPGLSATVLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLMQLQAHDPDAGANG 1787
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y + G ++ ++ SG L
Sbjct: 1788 HVTYYLGTGTAGAFL-LEPTSGEL 1810
>gi|114593508|ref|XP_001134748.1| PREDICTED: protocadherin-7 isoform 2 [Pan troglodytes]
gi|410223660|gb|JAA09049.1| protocadherin 7 [Pan troglodytes]
gi|410253298|gb|JAA14616.1| protocadherin 7 [Pan troglodytes]
gi|410296942|gb|JAA27071.1| protocadherin 7 [Pan troglodytes]
Length = 1069
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|426344011|ref|XP_004038571.1| PREDICTED: protocadherin-7 isoform 3 [Gorilla gorilla gorilla]
Length = 1069
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|348514391|ref|XP_003444724.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
Length = 684
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+F++ I + L GG Q+ + + I V + NDN P+ P+Y A I EN + +++
Sbjct: 195 HEHFSL-ILTALDGGEPQMTGTMQILITVLDANDNAPVFTQPIYKASIRENSAVGTTVMR 253
Query: 105 LAASDGDLDPDQRISYKISA 124
+ A+D D + RI+Y IS+
Sbjct: 254 VTATDADHGSNGRITYSISS 273
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY-----K 121
+ + +Q+ +VNDN P+ A + EN S + ++ + ASD D + RISY +
Sbjct: 426 VTLTLQISDVNDNAPVFEQQFLTAFVNENNSPGMSLLTVKASDMDYGSNARISYFLEDSQ 485
Query: 122 ISAGNPESYFNIDIGSGSL 140
++ + +YF++++ G +
Sbjct: 486 LNGMSASAYFSVNVERGEI 504
>gi|297674526|ref|XP_002815275.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Pongo abelii]
Length = 2916
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P VY A + E Q ++Q+ A+D D + I Y I
Sbjct: 1768 RAYCKVAVLIQDENDNSPCFEQSVYQASVSEGQLYNAHVIQVFATDLDSGLNGLIEYSIL 1827
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1828 SGNQEEAFQIDALSG 1842
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY A + E Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1791 VYQASVSEGQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1850
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + I+ +QV ++NDN P L P +I E+ +
Sbjct: 1851 DYELTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1909
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1910 VTHVSVHDVDLNSAFIFSFA-KDSNPGTKFAIDQNTG 1945
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P V + +++E Q + + + A D D
Sbjct: 812 TDCGSPPRNATMAVYVSVTDINDNRPFFPQCVPGKELHLKVLEGQPVNMLVTTVFAKDPD 871
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + Y +S+ + +F ID SG +
Sbjct: 872 EGNNAEVIYSVSSEDSSDHFKIDANSGEI 900
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1273 LYEASVKENQKPGEFVTRVEALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTTTIL 1332
Query: 60 -----------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + V++ ND+ P + Y +++ENQ +
Sbjct: 1333 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEV- 1391
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + ASD D ++ + Y I GN + YF I+ SG L
Sbjct: 1392 VYTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELS 1431
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2181 LASDSGRPPLSSTAVISIQVVDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2240
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2241 SHAEIIYNIISGNEKGHFYLEENTGVL 2267
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P+ +P+Y + I+E+
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q++ASD D+ + RI Y +S + E F ID SG++
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTV 251
>gi|402869109|ref|XP_003898612.1| PREDICTED: protocadherin-7 isoform 1 [Papio anubis]
Length = 1069
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|193787782|dbj|BAG52985.1| unnamed protein product [Homo sapiens]
Length = 1289
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 141 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 200
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 201 SGNQEEAFQIDALSG 215
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 164 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 223
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 224 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 282
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 283 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 318
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 554 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 613
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 614 SHAEIIYNIISGNEKGHFYLEENTGVL 640
>gi|431916497|gb|ELK16475.1| Protocadherin Fat 3 [Pteropus alecto]
Length = 2947
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 41 ISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
S +P+ +F + + +D P Q + V +QV + NDN P + VY ++ E
Sbjct: 7 CSFRSPKIHFEVTV-TDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPERDRKKR 65
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 66 GEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 105
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ ++D D + ++ + Y+I N YF+ID S L
Sbjct: 1084 PTYNTTLSEASLIGTPVLQVVSTDADSENNKMVHYQIVQDTYNSTDYFHIDSASGLILTA 1143
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V+I + ++NDN P+ +Y + + E
Sbjct: 1144 RMLDYELVQHCTLKVRATDNGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYVSELAPR 1203
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 1204 GHFVTCVQASDADSSDFDRLEYNILSGNDRTSFLMDSRSG 1243
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 2035 YLVAVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFRINPK---TGGISVSE 2091
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+ S
Sbjct: 2092 VLDYELCKKYYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDASVG 2151
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F++D
Sbjct: 2152 DSVILLIAEDADSQPNGQIHFSIVNGDRDNEFSVD 2186
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
VY A I E+ S ++ L A D D P+ +I + I G+ ++ F++D + L
Sbjct: 2139 VYSAVISEDASVGDSVILLIAEDADSQPNGQIHFSIVNGDRDNEFSVDPVLGIVKVKKKL 2198
Query: 59 TGGPDQVYLI--------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
Y + V I + +VNDN P+ Y A I EN+ I+QL +D
Sbjct: 2199 DRERVSGYSLLVQAKKATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTDR 2258
Query: 111 D-LDPDQRISYKISAGNPESYFNID 134
D S+ I +GN E F +D
Sbjct: 2259 DSFHNGPPFSFSILSGNEEKEFVLD 2283
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ ++D D + ++
Sbjct: 1058 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSTDADSENNKM 1115
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 1116 VHYQIVQDTYNSTDYFHIDSASG 1138
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 346 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 405
Query: 129 SYFNID 134
+ F I+
Sbjct: 406 NTFKIE 411
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 1703 LVSVRVTDINDNAPVFAHEVYQGNVKESDPPGEVVAILSTWDRDTSDINRQVSYHITGGN 1762
Query: 127 PESYFNI 133
P F +
Sbjct: 1763 PRGRFAL 1769
>gi|431892549|gb|ELK02982.1| Protocadherin gamma-B2 [Pteropus alecto]
Length = 692
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD ++ Y ++ + +D P + + + + +VNDN P+
Sbjct: 406 TDGALDREEISEYNVTI----------MATDRGKPPLSSSITITLHITDVNDNAPVFQQS 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q++ASD DL P+ +SY I A + E SY ++ SG
Sbjct: 456 AYLVYVPENNPPGASIAQVSASDSDLGPNGHVSYSIVASDLEPRALSSYVSVSAQSG 512
>gi|395853833|ref|XP_003799405.1| PREDICTED: protocadherin-7 isoform 1 [Otolemur garnettii]
Length = 1069
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|348563329|ref|XP_003467460.1| PREDICTED: protocadherin-7-like isoform 2 [Cavia porcellus]
Length = 1073
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|119625349|gb|EAX04944.1| dachsous 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 2776
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1628 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1687
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1688 SGNQEEAFQIDALSG 1702
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1651 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1710
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1711 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1769
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1770 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1805
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 672 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 731
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 732 EGNNAEVTYSVSSEDSSDHFKIDANSGEI 760
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2041 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2100
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2101 SHAEIIYNIISGNEKGHFYLEENTGVL 2127
>gi|109073954|ref|XP_001085483.1| PREDICTED: protocadherin-7 isoform 2 [Macaca mulatta]
Length = 1069
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>gi|344257359|gb|EGW13463.1| Protocadherin gamma-B2 [Cricetulus griseus]
Length = 611
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q +Y +S I +D P V +QV ++NDN P+ L
Sbjct: 366 TDGVLDREQTPAYNVSI----------IATDRGKPPLSSSTSVTLQVGDINDNTPVFLRT 415
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y Q+ E I Q++A D DL + +SY I A + E SY ++ SG
Sbjct: 416 SYLIQVAETPPPGASIAQVSAFDPDLGSNGHVSYSIIASDLEPQSLWSYVTVNAQSG 472
>gi|395504794|ref|XP_003756732.1| PREDICTED: uncharacterized protein LOC100928159 [Sarcophilus
harrisii]
Length = 2721
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++ I++ + TG P Q L + + + +VNDN P Y A I EN+ + +A
Sbjct: 2199 AHYTIELLARDTGSPPLQTSLTILLNISDVNDNAPRFSQQFYSAYIAENRPPGSLLCTVA 2258
Query: 107 ASDGDLDPDQRISYKISA----GNPESYF 131
ASD D + R+SY I G P S F
Sbjct: 2259 ASDPDAGDNARLSYSIVGSQIQGTPASSF 2287
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+NI I + G P + +QV ++NDN P P Y + EN + I+ L
Sbjct: 423 YNISITARDAGSPPLSTVTTLRVQVSDINDNPPQATKPSYDVYVEENNLAGIAILNLTVW 482
Query: 109 DGDLDPDQRISYKISAGNPES-----YFNIDIGSGSL 140
D D + R+S+ + N ++ YF + SG L
Sbjct: 483 DPDAPNNARLSFSLLDRNHQTGLVGRYFALHPESGVL 519
>gi|432913578|ref|XP_004078978.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 812
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +++ YK+ A + N G L P+ ++I ++Q++NDN P VY A
Sbjct: 121 LDREEKAFYKLKA----TVVNKQTGLQLE--PETEFII---KLQDMNDNEPQFSQEVYTA 171
Query: 91 QIVENQSGILPIVQLAASDGD---LDPDQRISYKISAGNPESYFNIDIGSG 138
I E P++Q+ A+D D ++ Y IS G+P YF++D +G
Sbjct: 172 SIPERSDVGTPVIQVTATDADDSMYGIGAKLFYSISRGHP--YFSVDPTTG 220
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 34/160 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGD---LDPDQRISYKISAGNPESYFNID--------- 53
VY A I E P++Q+ A+D D ++ Y IS G+P YF++D
Sbjct: 168 VYTASIPERSDVGTPVIQVTATDADDSMYGIGAKLFYSISRGHP--YFSVDPTTGVIRTA 225
Query: 54 IG-SDLTGGPDQVY-------------------LIVYIQVQNVNDNVPMTLDPVYYAQIV 93
+G D+ + Y +V I + +VNDN P+ VY +
Sbjct: 226 LGPKDMDRETKEHYQVVIEAKDMAGQRGGLTGTTVVNISLTDVNDNPPVFTQSVYQLSVP 285
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
E+ + + A+D D+ + +S+ I++G+ F+I
Sbjct: 286 ESAMFGTVVGSVQATDRDIGRNAEMSFSITSGDSMGIFDI 325
>gi|380798035|gb|AFE70893.1| protocadherin-7 isoform d precursor, partial [Macaca mulatta]
Length = 1028
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 37 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 86
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 87 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 140
>gi|348563327|ref|XP_003467459.1| PREDICTED: protocadherin-7-like isoform 1 [Cavia porcellus]
Length = 1070
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 265 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 314
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 315 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 368
>gi|260798696|ref|XP_002594336.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
gi|229279569|gb|EEN50347.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
Length = 2488
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y + E Q ++Q+ ASD D + R++Y I + E+ FNID
Sbjct: 418 YVPSVPEGQPSGTFVIQVTASDADQGSNGRVTYSIVHREDSETMFNIDADSGEISTAVVF 477
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P + + + +VNDN P+ + Y A + EN +
Sbjct: 478 DREERREHAVTVTATDNADNPLIGVCQLIVHITDVNDNDPVFENNKYAAVLSENTALHTS 537
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++AA D D+ + I Y +S P+ Y ID +G L
Sbjct: 538 FLRVAAQDADMGTNAEILYSLSEEVPQ-YLGIDRQTGWL 575
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLTGGP-- 62
Y A + E++ +V L A+D D + ++ Y+I+ GN F++ +IG+ + P
Sbjct: 856 YEASVDEDKDVGYSVVTLTANDEDEGANAKLRYQITTGNVGGVFDVVPEIGTIVVAAPLD 915
Query: 63 -----------------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQ 104
++ V I+V N+ND P Y I E S +PI+Q
Sbjct: 916 FEAVQEYELQLVASDGKNENTTKVNIKVNNINDEEPEFTRNEYTGSIREEDSNTPIPILQ 975
Query: 105 LAASD---GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A D G D D R S + N E F+I+I +G +
Sbjct: 976 VTARDPDRGASDADIRYSLQGQGANDE--FSINIITGQI 1012
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPD----QRISYKISAG---NPESYFNIDIGS 56
D Y ++EN + ++ + A+D D DPD +++Y+I+ N + F ID +
Sbjct: 1062 DEPYVGSVLENTAAGTSVMTVTATDAD-DPDVGRNAKLTYRITKNAKQNRVNLFRIDRNT 1120
Query: 57 --------DLTGGPDQVYLIV---------------YIQVQNVNDNVPMTLDPVYYAQIV 93
+L + Y +V +QV ++NDN P +Y +
Sbjct: 1121 GKIFTTVGNLDRETTKEYTLVVRAEDGDGLWGTGTVTVQVGDINDNPPAFNQRIYSTTMS 1180
Query: 94 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
E + +AASD D+ + R+ Y I GN + F +D
Sbjct: 1181 EGLGKDGIVTTVAASDADVGDNARLFYSIVGGNRNNQFRMD 1221
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 40/164 (24%)
Query: 4 DPVYYAQ-IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--- 59
+P+Y + +VEN I+Q++ASD D D +QRI+Y + + +++F I SD T
Sbjct: 207 NPIYSQRDVVENIPSTKAILQVSASDCDSDENQRITYSV---DDDAHFR--IASDGTIYP 261
Query: 60 ------GGPDQVY-----------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P+ +Y V +++ N+ND P+ Y + E+
Sbjct: 262 NSQLDYEVPNNMYEFLVKAVDHGTPVLTGSATVRVRMANINDEPPVFSQRTYTTFVAEDA 321
Query: 97 S--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
G++ V DGD I+Y I+ GN + F ID G
Sbjct: 322 EPGGLVATVHATDMDGD-----GITYAITGGN-DGTFVIDAKDG 359
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 34/167 (20%)
Query: 7 YYAQIVENQSGI-LPIVQLAASD---GDLDPDQRISYKISAGNPESYFNIDIG------- 55
Y I E S +PI+Q+ A D G D D R S + N E NI G
Sbjct: 958 YTGSIREEDSNTPIPILQVTARDPDRGASDADIRYSLQGQGANDEFSINIITGQIYASKS 1017
Query: 56 ---------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+D G + V I + ++NDN P D Y ++EN +
Sbjct: 1018 LDREERAVWRFIALATDEKGRGLVGFSDVAISLGDINDNAPEFNDEPYVGSVLENTAAGT 1077
Query: 101 PIVQLAASDGDLDPD----QRISYKISAG---NPESYFNIDIGSGSL 140
++ + A+D D DPD +++Y+I+ N + F ID +G +
Sbjct: 1078 SVMTVTATDAD-DPDVGRNAKLTYRITKNAKQNRVNLFRIDRNTGKI 1123
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 48 SYFNIDIGS---DLTGGPDQVY--LIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILP 101
S++ +++ + + +GGP + +V + + ++N+N P T Y + E Q
Sbjct: 372 SHYTLNVTATDDNASGGPGSLTGTAVVVVGINDINNNKPDFTQCAEYVPSVPEGQPSGTF 431
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
++Q+ ASD D + R++Y I + E+ FNID SG +
Sbjct: 432 VIQVTASDADQGSNGRVTYSIVHREDSETMFNIDADSGEI 471
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P+ V I + +VNDN P Y A + E++ +V L A+D D + ++ Y+
Sbjct: 830 PNSREAYVRISISDVNDNSPTFPRTQYEASVDEDKDVGYSVVTLTANDEDEGANAKLRYQ 889
Query: 122 ISAGNPESYFNI--DIGS 137
I+ GN F++ +IG+
Sbjct: 890 ITTGNVGGVFDVVPEIGT 907
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTG 60
D VY I EN + Q+ A D DL + ++SY + + F+++ + LT
Sbjct: 1923 DTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTA 1982
Query: 61 GPD----QVYLI-----------------VYIQVQNVNDNVPMTLDPV-YYAQIVENQSG 98
D Q Y++ VY V ++NDN P+ DP+ Y +++ EN
Sbjct: 1983 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPI-FDPMSYSSEVFENVPL 2041
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+V ++A D D + I Y I+AG+ +S F ID
Sbjct: 2042 ATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFRID 2077
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPES----------------------YFNIDIGSDLTGG 61
LAA+D DL + RISY+I GN E Y+ + + G
Sbjct: 1070 LAATDIDLGDNGRISYEIIEGNTERMFGVFPDGFLFVRAPLDREERDYYALTVSCQDAGQ 1129
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + ++ V I V + NDN P + + I EN + +L A D D+ + +S+
Sbjct: 1130 PSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSF 1189
Query: 121 KISAGNPESYFNIDIGSG 138
+S+ + F ID +G
Sbjct: 1190 TLSSQTQD--FTIDTRNG 1205
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+++ ASD D + ++ + ISAGN F+ID I +
Sbjct: 1402 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITAS 1461
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P ++Y + V + NDN P+ QI E PIV + A D D +
Sbjct: 1462 DCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNG 1521
Query: 117 RISYKISAGNPE----SYFNIDIGSG 138
++SY IS P+ +F I+ +G
Sbjct: 1522 KVSYAISKQEPQLPQGRHFGINTETG 1547
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 50 FNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ IG+ TG P Q V+I++++VNDN P + EN+ I+ L AS
Sbjct: 3616 YNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTTEGLNGYVSENEPPGTSIMTLMAS 3675
Query: 109 DGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
D DL + +Y++ G +S+ ++D SG
Sbjct: 3676 DPDLPRNGGPFTYQLVGGKHKSWLSVDRSSG 3706
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y+ I E S I + D D + + Y ++ GN F++D + L
Sbjct: 1282 YHVTISEGASEGTHITHVFTQDADEGLNGDVYYTLAKGNEAGQFSLDGATGQLSLARRLD 1341
Query: 60 GGPDQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ +V + V + NDN P ++E
Sbjct: 1342 RESQEIHHLVVVAKDAALKHPLSSNASVTIVVLDENDNAPEFTQSSSEVSVLETSPTGTE 1401
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ ASD D + ++ + ISAGN F+ID +GSL
Sbjct: 1402 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSL 1440
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+D + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 201 VDNKFRLATTANPSGDTSYLHLETT-GNLDRESRGSYQL-----------NISARDGGSP 248
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
+ YL V + + +VNDN P+ Y + E P+V + ASD DL + +I+Y
Sbjct: 249 PRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYY 308
Query: 122 ISAGNPESYFNIDIG 136
++ + N + G
Sbjct: 309 LAETEHQFTVNPETG 323
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
IQV + NDN P+ D VY I EN + Q+ A D DL + ++SY + +
Sbjct: 1909 IQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDV 1968
Query: 131 FNIDIGSGSL 140
F+++ +G L
Sbjct: 1969 FSLNPQTGML 1978
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 30/138 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG------------------- 61
I+ + A+D D P+ + Y IS GN F++D + TGG
Sbjct: 3247 ILTVGATDEDTGPNGMLRYSISGGNERQDFSVD---ERTGGIVIQQQLDYDLIQEYHLNI 3303
Query: 62 --------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
P ++ I + +VNDN P+ Y+ I EN+ + Q A+D D
Sbjct: 3304 TVQDLGYHPLSSVAMLTIILTDVNDNPPVFDQKEYHGYIPENKPVGTFVFQAHATDKDSP 3363
Query: 114 PDQRISYKISAGNPESYF 131
+ I Y P+ +F
Sbjct: 3364 KNAIIHYAFLPSGPDRHF 3381
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P L Y+ I E S I + D D + + Y ++ GN
Sbjct: 1263 VKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYTLAKGNEA 1322
Query: 129 SYFNIDIGSGSL 140
F++D +G L
Sbjct: 1323 GQFSLDGATGQL 1334
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
+ +VND+ P+ Y + E LAA+D DL + RISY+I GN E F
Sbjct: 1038 IADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFG 1097
Query: 133 I 133
+
Sbjct: 1098 V 1098
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P+ +P+Y + I+E+
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q++ASD D+ + RI Y +S + E F ID SG++
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTV 251
>gi|119625348|gb|EAX04943.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|119625350|gb|EAX04945.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 2527
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1379 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1438
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1439 SGNQEEAFQIDALSG 1453
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1402 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1461
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1462 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1520
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1521 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1556
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 423 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 482
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 483 EGNNAEVTYSVSSEDSSDHFKIDANSGEI 511
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 1792 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 1851
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 1852 SHAEIIYNIISGNEKGHFYLEENTGVL 1878
>gi|27923751|sp|Q9VJB6.2|CADN2_DROME RecName: Full=Putative neural-cadherin 2; AltName:
Full=Cadherin-N2; Short=dN2-cadherin; Flags: Precursor
Length = 2215
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY--- 120
Y V I V++VNDN P+ Y QI E LP I+Q+ A+DGD+D I Y
Sbjct: 232 YTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLT 291
Query: 121 --KISAGNP-ESYFNIDIGSGSL 140
I NP S F+I+ +G +
Sbjct: 292 GQGIDPDNPANSKFDINRTTGDI 314
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
DP Y +V E+ P+ + A+D D D RI Y+I+AGN F+I
Sbjct: 701 FDPKNYEAVVSEDDPPGTPVTSVTATDPD--EDARIHYEITAGNTRGRFSIASQNGRGLI 758
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
SD G D +VY+ V + N+ P+ + Y + E+
Sbjct: 759 TVAQPLDYKQEKRFVLTVTASDSGGRTDTA--LVYVNVSDANNFEPVFENTPYAVSLFED 816
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++ ++A+D D+ + +I+Y + G S F I+ +G++
Sbjct: 817 APIGTTVLVVSATDSDVGKNAQITYSLGTDGGESASEFTINPQTGAI 863
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ P Y I E+ +G +++++A+D D D + R+ Y + + +
Sbjct: 897 VEISVTDVNDNAPVFESPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALE-DDGD 955
Query: 129 SYFNIDIGSG 138
F ID +G
Sbjct: 956 GAFAIDSSTG 965
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPIVQLAASDGDL 112
I +D P V + V +VNDN P DP Y +V E+ P+ + A+D
Sbjct: 672 IAADSGEVPKSASATVILTVTDVNDNDPY-FDPKNYEAVVSEDDPPGTPVTSVTATDP-- 728
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
D D RI Y+I+AGN F+I +G
Sbjct: 729 DEDARIHYEITAGNTRGRFSIASQNG 754
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
P Y I E+ +G +++++A+D D D + R+ Y + + + F ID + +
Sbjct: 914 PQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALE-DDGDGAFAIDSSTGVIRTAKP 972
Query: 60 ------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P ++ V I++Q+VND+ P + I EN
Sbjct: 973 LDRESVAMYILKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAENSPIGS 1032
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ ++ A D D P+ + Y + G + F +++ SG+
Sbjct: 1033 TVGEIYAHDPDEGPNAVVQYSVIGGEDSNSFALNVRSGA 1071
>gi|322800564|gb|EFZ21550.1| hypothetical protein SINV_01487 [Solenopsis invicta]
Length = 565
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYL 67
Y + N + Q DG L D +I+ + Y+ + D P + L
Sbjct: 146 YEIVSGNHGDAFRLSQQRGRDGVLYLDLQIAGSLDREARSRYYLVIEALDGGTPPLRSRL 205
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--G 125
V + VQ+VNDN P+ Y A + EN + P++ + A+D D + RI Y I+
Sbjct: 206 TVNVTVQDVNDNPPVFNQTRYMASVPENATVGTPVLAVNATDADAGDNGRIEYSINRRQS 265
Query: 126 NPESYFNIDIGSG 138
+ E F ID +G
Sbjct: 266 DREEMFRIDPETG 278
>gi|301613239|ref|XP_002936117.1| PREDICTED: cadherin-7-like [Xenopus (Silurana) tropicalis]
Length = 783
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 17 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--DLTGGPDQVYLIVYIQVQ 74
G I + + GD+ +R+ + ++Y+ + + LT P + I+VQ
Sbjct: 90 GASSIFSIDENTGDIHASKRLDRE-----EQAYYTLRAQALDRLTSKPKEPESEFVIKVQ 144
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESY 130
++NDN P LD Y A I E ++Q+ A+D D DP R+SY I G P Y
Sbjct: 145 DINDNEPKFLDGPYTAGIPEMSPVGTSVLQVTATDAD-DPTYGNSARVSYSILQGQP--Y 201
Query: 131 FNIDIGSG 138
F+++ +G
Sbjct: 202 FSVEPKTG 209
>gi|11128035|ref|NP_061746.1| protocadherin gamma-B2 isoform 1 precursor [Homo sapiens]
gi|37999832|sp|Q9Y5G2.1|PCDGE_HUMAN RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
gi|5456959|gb|AAD43725.1| protocadherin gamma B2 [Homo sapiens]
gi|119582354|gb|EAW61950.1| hCG1982215, isoform CRA_ac [Homo sapiens]
Length = 931
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASD 495
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 496 LKPREILSYVSVSAQSG 512
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P+ +P+Y + I+E+
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q++ASD D+ + RI Y +S + E F ID SG++
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTV 251
>gi|441619416|ref|XP_003257906.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Nomascus
leucogenys]
Length = 2917
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P VY A + E Q ++Q+ A+D D + I Y I
Sbjct: 1769 RAYCKVAVLIQDENDNSPCFEQSVYQAAVSEGQLYNAHVIQVFATDLDSGLNGLIEYSIL 1828
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1829 SGNQEEAFQIDALSG 1843
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 32/160 (20%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
VY A + E Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1792 VYQAAVSEGQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAML 1851
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + I+ +QV ++NDN P L ++ VE LP
Sbjct: 1852 DYELTSTYSLIVQATDKGIPRLSNTTIIKVQVTDINDNAPAFLT----SEAVEIAEDSLP 1907
Query: 102 ---IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1908 GVIVTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1946
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2182 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2241
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2242 SHAEIIYNIISGNEKGHFYLEENTGVL 2268
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ V++ ND+ P + Y +I+ENQ + + + ASD D ++ + Y I GN +
Sbjct: 1361 ILCTVEDENDHAPEFIVSSYDIEILENQEPEV-VYTVLASDMDAGNNRAVEYHIIDGNTD 1419
Query: 129 SYFNIDIGSGSLG 141
YF I+ SG L
Sbjct: 1420 EYFAINEMSGELS 1432
>gi|427796113|gb|JAA63508.1| Putative cadherin-n2, partial [Rhipicephalus pulchellus]
Length = 1563
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 41/161 (25%)
Query: 18 ILPIVQLAASDGDLDPDQRISYKISA-------GNPESYFNIDIGS---------DLTGG 61
IL I Q+ A+DGD D + I Y ++ GN + N G DL G
Sbjct: 2 ILLIFQVTATDGDKDRESLIVYFLTGQGVDEDPGNSKFAINTTTGEIYVLKPLDRDLPHG 61
Query: 62 PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
Q V+ + +++VNDN P +Y + EN + + ++ +
Sbjct: 62 RSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIYTGNVTENGTAGMTVMTM 121
Query: 106 AASDGDLDPDQ----RISYKISAG----NPESYFNIDIGSG 138
A+D D DP++ R++Y I N E F ID +G
Sbjct: 122 TATDYD-DPNEGNNARLAYSIEQNQVNENGELIFTIDEETG 161
>gi|395504790|ref|XP_003756730.1| PREDICTED: protocadherin gamma-B5 [Sarcophilus harrisii]
Length = 743
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86
+DG LD +Q Y ++ SD P + + + +VNDN P+ L
Sbjct: 406 TDGPLDREQTPQYNVTV----------TASDKGKPPLSTSKTLTLHIADVNDNPPVFLQS 455
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN-----PESYFNIDIGSGSL 140
Y + EN I ++ASD DLD + R+SY I + + SY +++ SG++
Sbjct: 456 SYVVYVPENNPSGASITSVSASDADLDGNGRVSYSIVSSDLVSLPLSSYVSVNSHSGAI 514
>gi|312381345|gb|EFR27113.1| hypothetical protein AND_06391 [Anopheles darlingi]
Length = 1775
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 35/147 (23%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y A I EN + + Q++A+D D D+ ++YKI
Sbjct: 679 PAYRASIPENATAGYNVTQVSATDPD-GLDELLTYKIVGASDNFVIDDHSGIITVARDAR 737
Query: 45 -----NPESYF----NIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
NPESY ID G + P+ V+++++++ND P P Y A + E
Sbjct: 738 LDRDTNPESYTIVVNAIDAGFPI---PETATTTVHVKIEDINDKPPRFPQPSYTAYVSER 794
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI 122
+ ++++ ASD DL R+ Y I
Sbjct: 795 TAIDAEVIRVTASDTDL--SARLEYSI 819
>gi|158298606|ref|XP_001238044.2| AGAP009726-PA [Anopheles gambiae str. PEST]
gi|157013965|gb|EAU76028.2| AGAP009726-PA [Anopheles gambiae str. PEST]
Length = 1698
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 35/165 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 22 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 76
Query: 62 -------PDQVYL-------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ YL I+ I V++VND P VY + E + P
Sbjct: 77 GALDYETRKRYYLTLVASDSLNENETIIVINVKDVNDMPPSFPQQVYERTMDEELAVPFP 136
Query: 102 IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
I+Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 137 IMQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 181
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID------ 53
VY + E + PI+Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 122 VYERTMDEELAVPFPIMQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 181
Query: 54 -----IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYYAQI 92
+ D G Q V+ Q ++++NDN P+ VY+ +
Sbjct: 182 FVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNV 241
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI 122
EN + + ++ + A D D DP++ + K+
Sbjct: 242 TENGTAGMVVMTMTAVDYD-DPNEGTNAKL 270
>gi|410957818|ref|XP_003985521.1| PREDICTED: protocadherin-7 isoform 1 [Felis catus]
Length = 1048
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 243 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 292
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 293 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 346
>gi|326673407|ref|XP_001922122.3| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
++I V +VNDN P+ P+Y A I EN P++ ++ASD D +SY I+
Sbjct: 218 IHITVLDVNDNAPVFTKPIYRAIITENSPSGTPLITVSASDSDKGAHGEVSYLIA 272
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYI-QVQNVNDNVPMTLD 85
+DGDLD ++ ES ++I + G P + Q+ +VNDN P+
Sbjct: 394 TDGDLDRER-----------ESEYDISVTCADEGVPSLSSSVTLSLQISDVNDNAPVFEQ 442
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
Y A + EN + L I + A D D + + R+SY
Sbjct: 443 SSYQASVQENNTPGLSIFTVRARDADFNQNARVSY 477
>gi|395504778|ref|XP_003756724.1| PREDICTED: protocadherin gamma-B5-like [Sarcophilus harrisii]
Length = 822
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 27 SDGDLDPDQRISYKIS-----AGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81
+DG LD +Q Y I+ GNP + I+ + V +VNDN P
Sbjct: 401 TDGSLDREQISEYNITVIAIDKGNPSLF---------------TSKILTLVVGDVNDNPP 445
Query: 82 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ L P Y I EN I +++ASD DL+ + R+SY I
Sbjct: 446 VFLLPSYVVYITENNLSGASIARVSASDLDLEENGRVSYSI 486
>gi|355682924|gb|AER97007.1| dachsous 1 [Mustela putorius furo]
Length = 761
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + + G P + + V + V +VNDN P+ Y + E+ ++ + AS
Sbjct: 32 YNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTHASYRMAVPEDTPVGAELLHVEAS 91
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D D P + + +S+G+P F +D SG+L
Sbjct: 92 DADPGPHGLVRFTVSSGDPSGLFELDESSGAL 123
>gi|260809723|ref|XP_002599654.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
gi|229284935|gb|EEN55666.1| hypothetical protein BRAFLDRAFT_205652 [Branchiostoma floridae]
Length = 417
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 49 YFNIDI-GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
++N+ + +D+ P V + V + NDN P VY A + E+Q+ +V +A
Sbjct: 21 FYNLTVQATDMATSPLSNSSYVEVTVIDSNDNYPTFSPTVYSATVPEDQAISSTVVTVAV 80
Query: 108 SDGDLDPDQRISYKISAGNPESYFNI 133
+D D+ + I+Y I+AGN E F I
Sbjct: 81 TDADIGTNADIAYSITAGNLEGKFGI 106
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 28/156 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY A + E+Q+ +V +A +D D+ + I+Y I+AGN E F I +T
Sbjct: 60 VYSATVPEDQAISSTVVTVAVTDADIGTNADIAYSITAGNLEGKFGIQSNGAVTLADTLN 119
Query: 60 -----------GGPDQVY-----------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D Y +V I V + NDN P+ Y I E+ +
Sbjct: 120 YENTTQYTLTITATDDGYPPLSSEATVSITVVTIWVTDENDNTPVFNPDNYIINIEEDVA 179
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
L A+D D + ++Y I++G+ F+I
Sbjct: 180 VNSAFYMLRANDADSGTNADLTYSITSGDALGQFSI 215
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----------------------GG 61
L A+D D + ++Y I++G+ F+I +++ G
Sbjct: 187 LRANDADSGTNADLTYSITSGDALGQFSIATNGEVSVVSNLDRETTGQYILDVFVQDGGS 246
Query: 62 PD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V + V +VNDN P+ Y + E+ + + + A+D D + ++SY
Sbjct: 247 PSLNATATVTVNVLDVNDNFPVFSSDPYTVSVYEDIAVGATVADVTATDADSGTNAQVSY 306
Query: 121 KISAGNPESYFNIDIGSGSL 140
I GN E+ F ++ G L
Sbjct: 307 TIIGGNEENKFVVNQADGPL 326
>gi|194219808|ref|XP_001917815.1| PREDICTED: protocadherin gamma-B1-like [Equus caballus]
Length = 812
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I + G P V + + +VNDN P+ Y + EN I Q++AS
Sbjct: 416 YNVTITATDKGKPPLSSSTSVTLHIGDVNDNAPVFHQASYVVYVAENNPPGASIAQVSAS 475
Query: 109 DGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
D DL P+ R+SY I A + E SY ++ SG
Sbjct: 476 DPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSG 510
>gi|119625352|gb|EAX04947.1| dachsous 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 2666
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1518 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1577
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1578 SGNQEEAFQIDALSG 1592
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1541 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1600
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1601 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1659
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1660 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1695
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 562 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 621
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID SG +
Sbjct: 622 EGNNAEVTYSVSSEDSSDHFKIDANSGEI 650
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 1931 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 1990
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 1991 SHAEIIYNIISGNEKGHFYLEENTGVL 2017
>gi|380798033|gb|AFE70892.1| protocadherin-7 isoform c precursor, partial [Macaca mulatta]
Length = 1020
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 37 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 86
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 87 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 140
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 3 LDPVYYAQIV-ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
DP Y +V E+ P+ + A+D D D RI Y+I+AGN F+I
Sbjct: 701 FDPKNYEAVVSEDDPPGTPVTSVTATDPD--EDARIHYEITAGNTRGRFSIASQNGRGLI 758
Query: 54 ------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
SD G D +VY+ V + N+ P+ + Y + E+
Sbjct: 759 TVAQPLDYKQEKRFVLTVTASDSGGRTDTA--LVYVNVSDANNFEPVFENTPYAVSLFED 816
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++ ++A+D D+ + +I+Y + G S F I+ +G++
Sbjct: 817 APIGTTVLVVSATDSDVGKNAQITYSLGTDGGESASEFTINPQTGAI 863
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIV-ENQSGILPIVQLAASDGDL 112
I +D P V + V +VNDN P DP Y +V E+ P+ + A+D
Sbjct: 672 IAADSGEVPKSASATVILTVTDVNDNDPY-FDPKNYEAVVSEDDPPGTPVTSVTATDP-- 728
Query: 113 DPDQRISYKISAGNPESYFNIDIGSG 138
D D RI Y+I+AGN F+I +G
Sbjct: 729 DEDARIHYEITAGNTRGRFSIASQNG 754
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN P+ P Y I E+ +G +++++A+D D D + R+ Y + + +
Sbjct: 897 VEISVTDVNDNAPVFEAPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALD-DDGD 955
Query: 129 SYFNIDIGSG 138
F ID +G
Sbjct: 956 GAFAIDSSTG 965
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
P Y I E+ +G +++++A+D D D + R+ Y + + + F ID + +
Sbjct: 914 PQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALD-DDGDGAFAIDSSTGVIRTAKP 972
Query: 60 ------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P ++ V I++Q+VND+ P + I EN
Sbjct: 973 LDRESVAMYTLKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAENSPIGS 1032
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGS 139
+ ++ A D D P+ + Y + G + F +++ SG+
Sbjct: 1033 TVGEIYAHDPDEGPNAVVQYSVIGGEDSNSFALNVRSGA 1071
>gi|195036462|ref|XP_001989689.1| GH18657 [Drosophila grimshawi]
gi|193893885|gb|EDV92751.1| GH18657 [Drosophila grimshawi]
Length = 848
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGN 126
+ I +Q+VNDN P+ L Y A+++EN++ +Q+ A D DL+ + +I+Y+I G
Sbjct: 603 IIIDIQDVNDNAPIFLHRQYEAKLLENKAEFETPLQVEARDLDLNGTENSQITYEIVEGL 662
Query: 127 PESYFNIDIGSG 138
F+ID SG
Sbjct: 663 YRMNFSIDPESG 674
>gi|395817827|ref|XP_003782348.1| PREDICTED: protocadherin alpha-2 [Otolemur garnettii]
Length = 817
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AG 125
+ I+V +VNDN P VY +++EN +V+L ASD D + + Y +S +
Sbjct: 229 ILIKVLDVNDNEPTFAQSVYKVKLLENTPNGTLVVKLNASDADEGSNSELVYSLSSDVSS 288
Query: 126 NPESYFNIDIGSGSL 140
++ FNID SG +
Sbjct: 289 TIQTKFNIDPSSGEI 303
>gi|340379563|ref|XP_003388296.1| PREDICTED: protocadherin Fat 4 [Amphimedon queenslandica]
Length = 4052
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY---FNIDIG-------- 55
Y I+EN S + ++L A+D D + I+Y + NP S N G
Sbjct: 3074 YVVDIIENYSTLTVFIRLNATDEDFGNNSIITYTL-LTNPSSANVSLNSSTGEVSFLISP 3132
Query: 56 --------------SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
SD+ G D L I + +VNDN P+ Y A I EN + +
Sbjct: 3133 DHETASRLEYYIRASDIGGLEDLATLT--INIIDVNDNTPLFTGSNYTASIYENTTANVE 3190
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ ++A+D D + I Y I + + YF ID +G
Sbjct: 3191 VLLVSATDSDSGSNALIRYDIDLESSQ-YFTIDTVTG 3226
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAA---SDGDL-------DPDQRISYKISAGNPESYFNI-- 52
P+Y A + E+ + +V+L A +DG L D R + I NPES
Sbjct: 2240 PLYTATLPEDTAAGTTVVRLLAEPRTDGALLFYSITDTGDIRFPFSI---NPESGVITVN 2296
Query: 53 DIGSDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D G D P + + V + + ++ND VP Y I E S
Sbjct: 2297 DRGLDYETTPSYSFTVQAEEIRTGLYSQATVQVSITDINDQVPSFTQSSYIINIPETISK 2356
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I+ + A+DGD P+ +++Y +S P + F ID +G
Sbjct: 2357 GSTILTVEAADGDTPPNAQVTYSLS---PSTSFTIDPSTG 2393
>gi|190338128|gb|AAI62806.1| Cdh7 protein [Danio rerio]
Length = 787
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI-----DIGSDLTGGPDQ 64
+ V N G I + + GD+ +R+ + ++Y+ + D ++L P+
Sbjct: 80 KYVLNGEGATSIFTIDENTGDIHATKRLDRE-----EQAYYTLRAQARDRATNLPVEPES 134
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISY 120
++I +VQ++NDN P LD Y AQ+ E +V++ A+D D DP R+ Y
Sbjct: 135 EFVI---KVQDINDNEPKFLDGPYNAQVPEMSPVGTSVVEVKATDAD-DPTYGNSARVVY 190
Query: 121 KISAGNPESYFNIDIGSG 138
I G P YF+++ +G
Sbjct: 191 SILEGQP--YFSVEPKTG 206
>gi|449501192|ref|XP_004186119.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin 7 [Taeniopygia
guttata]
Length = 1011
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY++S + G D I+ + + +VNDN P VY
Sbjct: 72 GALDREQRDSYELS-------LRVRDGGDPARSSQ---AILRVLITDVNDNSPRFEKSVY 121
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN S PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 122 EADLAENSSPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.138 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,443,740,074
Number of Sequences: 23463169
Number of extensions: 103108218
Number of successful extensions: 189721
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2732
Number of HSP's successfully gapped in prelim test: 2035
Number of HSP's that attempted gapping in prelim test: 151518
Number of HSP's gapped (non-prelim): 35153
length of query: 141
length of database: 8,064,228,071
effective HSP length: 105
effective length of query: 36
effective length of database: 9,895,562,622
effective search space: 356240254392
effective search space used: 356240254392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)