BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11815
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV----- 65
+ EN ++Q+ A D D D I Y I G+ FNID S + D +
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRETT 1110
Query: 66 --YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
Y + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
+ Y +
Sbjct: 864 EVMYSV 869
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ + PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2188 PFYTASINEDITMNTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2244
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V ++NDN P+ P Y + E+
Sbjct: 2245 LDYEVTSVYKLTVRASDALTGARAEV--TVDLLVDDINDNPPVFDQPTYNTTLSESSLIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D ++ + Y+I N YF+ID SG
Sbjct: 2303 TPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSG 2343
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D ++ + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSESSLIGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2409 GHFVTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVL 2450
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F+I+ TGG
Sbjct: 3240 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPK---TGGISVLE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3391
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D + ++++SY I+ GN
Sbjct: 2908 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGQFAL 2974
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
Y A++ EN + ++ + A+DGD ++SY I + F ID
Sbjct: 2499 TYVAEVRENAASGTKVIHVRATDGDPGTYGQVSYSIINDFAKDRFLIDSNGQIITTERLD 2558
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P + Y A + + +
Sbjct: 2559 RENPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLV 2618
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2619 TQVQALDPDDGANSRITYSL 2638
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYY 89
LD +Q+ SY IS +D + G L V I V ++NDN P+ Y
Sbjct: 3192 LDREQQSSYNISVR----------ATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYL 3241
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S ++ + A+ D+ + I+Y I +GN + F+I+ +G +
Sbjct: 3242 VTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGI 3292
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 26/131 (19%)
Query: 34 DQRISYKISAGNP---------ESYFNIDIGSDLTGGPDQVYLI--------------VY 70
++++SY I+ GNP +S + + + L +Y + V
Sbjct: 2956 NRQVSYHITGGNPRGQFALGMVQSEWKVYVKRPLDREEQDIYFLNITASDGLFVTQAMVE 3015
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPES 129
+ V +VNDN P+ Y A + E+ I++++A D D+ + I Y + +GN E
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNNE- 3074
Query: 130 YFNIDIGSGSL 140
F +D SG L
Sbjct: 3075 -FFLDPESGEL 3084
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 51 NIDIGSDLT---GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
NID G + GG + V + + VN +P+ P Y A I E+ + PI+ + A
Sbjct: 2150 NIDYGVTILAKDGGNPSLSTFVELPITIVNKAMPVFDKPFYTASINEDITMNTPILSINA 2209
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + Q I Y I G+P FNID +G L
Sbjct: 2210 TSPE---GQGIIYLIIDGDPFQQFNIDFDTGVL 2239
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
VY A I E+ ++ L A D D P+ +I + I G+ ++ F +D + L
Sbjct: 3344 VYSAVISEDALEGDSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVDPILGLVKVKKKL 3403
Query: 59 ----------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P V I + +VNDN P+ Y A I EN+
Sbjct: 3404 DRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQENKPVGTS 3463
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D S+ I +GN + F +D
Sbjct: 3464 ILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLD 3497
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ A D D + ++ + IS GN +S FNID+ +G L
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQL 782
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
+ + ASD D R+ Y I +GN + F +D + S + +Y +
Sbjct: 2412 VTCVQASDADSSDLDRLEYSILSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVS 2471
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
V+I+V N P Y A++ EN + ++ + A+DGD ++S
Sbjct: 2472 DGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPGTYGQVS 2531
Query: 120 YKISAGNPESYFNID 134
Y I + F ID
Sbjct: 2532 YSIINDFAKDRFLID 2546
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ + I Y + +GN E + + + G T
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSLYGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATD 3106
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG V + +++VNDN P+ Y A + EN + + ++ A D D+ ++++
Sbjct: 3107 GGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDPDVGINRKVV 3166
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + + F+ID SG
Sbjct: 3167 YSLE-DSASGVFSIDSSSG 3184
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +QR Y +S ++T G + V+I+V + NDN P P Y
Sbjct: 1420 LDAEQRSVYNMSV-------------EVTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDV 1466
Query: 91 QIVENQSGILP---IVQLAASDGDLDPDQRISYKISA 124
I E+ +LP I+Q+ A+ D D ++SY I +
Sbjct: 1467 TISED---VLPDTEILQIEAT--DRDEKHKLSYTIHS 1498
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQ 72
N+ G+ I Q G + D+R+ +++S P +F + L D V+ + V ++
Sbjct: 2750 NKEGVFIIEQ---ETGAIKLDKRLDHEVS---PAFHFKVAATIPL-DKVDIVFTVDVDVK 2802
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY-- 130
V ++NDN P+ Y I+E + Q+ A D D + +++Y + + +
Sbjct: 2803 VLDLNDNKPVFETSTYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVI 2862
Query: 131 --FNIDIGSG 138
FNID +G
Sbjct: 2863 EAFNIDSNTG 2872
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 45 NPESYFNIDIGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+PE+Y I SD G P + + V I+V NVNDN P+ + V ++ +
Sbjct: 538 SPETYRFIVRASDW-GSPYRHESEVNVTIRVGNVNDNSPL-FEKVACQGVISYDFPVGGH 595
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A S D+D + + YKI +GN +F ++ SG L
Sbjct: 596 IT-AISAIDIDELELVKYKIISGNELGFFYLNPDSGVL 632
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+P+Y A + E+ + ++Q+ A D D + + Y I AGN + F I+
Sbjct: 1567 NPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIE 1616
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ FNID S + D
Sbjct: 1051 VKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADILDRETT 1110
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1111 ASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1170
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1171 AEDPDSGSNEKLTYRITSGNPQNFFAINIKTG 1202
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1146 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLIT 1205
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1206 TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1265
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1266 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1310
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYVLNITIY 803
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ + V++ NDN P+ L Y I+E+ S I+Q+ A D DL +
Sbjct: 804 DLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSILESSSIGTEIIQVEARDKDLGSNG 863
Query: 117 RISYKI 122
++Y +
Sbjct: 864 EVTYSV 869
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI---------- 54
P Y A I E+ S PI+ + A+ + Q I Y I G+P FNID
Sbjct: 2188 PFYTASINEDISINTPILSINATSPE---GQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2244
Query: 55 --------------GSD-LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
SD LTG +V V + V +VNDN P+ P Y + E+
Sbjct: 2245 LDYEVMSVYKLTVRASDALTGARAEV--TVDLLVDDVNDNPPVFDQPTYNTTLSESSLIG 2302
Query: 100 LPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSG 138
P++QL ++D D + + Y+I N YF+ID SG
Sbjct: 2303 TPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSG 2343
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E+ P++QL ++D D + + Y+I N YF+ID S L
Sbjct: 2289 PTYNTTLSESSLIGTPVLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTA 2348
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G P ++V I + +VNDN P+ +Y + + E
Sbjct: 2349 RMLDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPR 2408
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + ASD D R+ Y I +GN + F +D SG L
Sbjct: 2409 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVL 2450
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1551 VIVNVEDANDHSPYFTNPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTG 1610
Query: 129 SYFNID 134
+ F I+
Sbjct: 1611 NTFKIE 1616
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3240 YLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPK---TGGISVLE 3296
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3297 ALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISEDALEG 3356
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3357 DSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVD 3391
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D + ++++SY I+ GN
Sbjct: 2908 LVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLSTLDKDTSNINRQVSYHITGGN 2967
Query: 127 PESYFNI 133
P F +
Sbjct: 2968 PRGRFAL 2974
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYY 89
LD +Q+ SY IS +D + G L V I V ++NDN P+ Y
Sbjct: 3192 LDREQQSSYNISVR----------ATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYL 3241
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S ++ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3242 VTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQGKFRINPKTGGI 3292
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 51 NIDIGSDLT---GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
NID G + GG + V + + VN +P+ P Y A I E+ S PI+ + A
Sbjct: 2150 NIDYGVTILAKDGGTPSLSTFVELPITIVNKAMPVFDKPFYTASINEDISINTPILSINA 2209
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + Q I Y I G+P FNID +G L
Sbjct: 2210 TSPE---GQGIIYLIIDGDPFQQFNIDFDTGVL 2239
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
Y A++ EN + ++ + A+DGD ++SY I + F ID
Sbjct: 2499 TYVAEVRENAASGTKVIHVRATDGDPGTYGQVSYSIINDFAKDRFLIDSNGQIITTERLD 2558
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P + Y A + + +
Sbjct: 2559 RENPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTLEYRASVRADVGRGHLV 2618
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2619 TQVQALDPDDGANSRITYSL 2638
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 34 DQRISYKISAGNP---------ESYFNIDIGSDLTGGPDQVYLI--------------VY 70
++++SY I+ GNP +S + + + L +Y + V
Sbjct: 2956 NRQVSYHITGGNPRGRFALGMVQSEWKVYVKRPLDREEQDIYFLNITASDGLFVTQAMVE 3015
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ Y A + E+ I++++A D D+ + I Y + G+ S
Sbjct: 3016 VTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSL-YGSGNSD 3074
Query: 131 FNIDIGSGSL 140
F +D SG L
Sbjct: 3075 FFLDPESGEL 3084
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
VY A I E+ ++ L A D D P+ +I + I G+ ++ F +D + L
Sbjct: 3344 VYSAVISEDALEGDSVILLIAEDVDSKPNGQIRFSIVGGDRDNEFAVDPILGLVKVKKKL 3403
Query: 59 ----------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P V I + +VNDN P+ Y A I EN+
Sbjct: 3404 DRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQENKPVGTS 3463
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D S+ I +GN + F +D
Sbjct: 3464 ILQLVVTDRDSFHNGPPFSFSILSGNEDEEFMLD 3497
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLTGGPDQVYLI----- 68
+ + ASD D R+ Y I +GN + F +D + S + +Y +
Sbjct: 2412 VTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVLTLSSHRKQRMEPLYSLNVSVS 2471
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
V+I+V N P Y A++ EN + ++ + A+DGD ++S
Sbjct: 2472 DGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPGTYGQVS 2531
Query: 120 YKISAGNPESYFNID 134
Y I + F ID
Sbjct: 2532 YSIINDFAKDRFLID 2546
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ A D D + ++ + IS GN +S FNID+ +G L
Sbjct: 744 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQL 782
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSDLT-------------------- 59
I++++A D D+ + I Y + +GN + + + + G T
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSLYGSGNSDFFLDPESGELKTLALLDRERVPVYNLIARATD 3106
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG V + +++VNDN P+ Y A + EN + + ++ A D D+ ++++
Sbjct: 3107 GGGRFCSSTVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAVDPDVGINRKVV 3166
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + + F+ID SG
Sbjct: 3167 YSLE-DSASGVFSIDSSSG 3184
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +QR Y +S ++T G + V+I V + NDN P P Y
Sbjct: 1420 LDAEQRSVYNMSV-------------EVTDGTNVAVTQVFITVLDNNDNGPEFSQPHYDV 1466
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSGSL 140
I E+ I+Q+ A+ D D ++SY I + F ID +G L
Sbjct: 1467 TISEDVPPDTEILQIEAT--DRDEKHKLSYTIHSSIDAISMRKFRIDPSTGVL 1517
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 45 NPESYFNIDIGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+PE+Y I SD G P + + V I+V NVNDN P+ + V ++ S P+
Sbjct: 538 SPETYRFIVRASDW-GSPYRHESEVNVTIRVGNVNDNSPL-FEKVACQGVI---SYDFPV 592
Query: 103 --VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A S D+D + + YKI +GN +F ++ SG L
Sbjct: 593 GGHITAISAIDIDELELVKYKIISGNELGFFYLNPDSGVL 632
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+P+Y A + E+ + ++Q+ A D D + + Y I AGN + F I+
Sbjct: 1567 NPLYEASVFESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIE 1616
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD------- 63
+ EN ++Q+ A D D D I Y I G+ F+ID S + D
Sbjct: 1052 VKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRETM 1111
Query: 64 -----QVY------------LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
VY + VYI+V++VNDN P+T +P+YY ++EN + ++Q+
Sbjct: 1112 GSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQ 1171
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D +++++Y+I++GNP+++F I+I +G
Sbjct: 1172 AEDPDSSSNEKLTYRITSGNPQNFFAINIKTG 1203
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT- 59
+T +P+YY ++EN + ++Q+ A D D +++++Y+I++GNP+++F I+I + L
Sbjct: 1147 LTSEPIYYPVVMENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIT 1206
Query: 60 ----------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG P Q + V +QV + NDN P + VY ++ E
Sbjct: 1207 TTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVVQVLDENDNKPQFPEKVYQIKLPER 1266
Query: 96 QSGIL--PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI + A D D P+ ISY I GN + F ID +G
Sbjct: 1267 DRKKRGEPIYRAFAFDRDEGPNAEISYSIVDGNDDGKFFIDPKTG 1311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------------------------ 56
I+++ A D D + ++ + IS GN +S FNID+ +
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQLKVLMPMDREHTDLYLLNITIY 804
Query: 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
DL + ++ I V++ NDN P+ + Y I+E+ I+Q+ A D DL +
Sbjct: 805 DLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILESSGIGTEIIQVEARDKDLGSNG 864
Query: 117 RISYKI 122
++Y +
Sbjct: 865 EVTYSV 870
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDL---- 58
P Y + E P++Q+ + D D + ++ + Y+I N YF+ID S L
Sbjct: 2290 PTYNTTLSEASLIGTPVLQVVSIDADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTA 2349
Query: 59 -------------------TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G P ++V+I + +VNDN P+ +Y + + E
Sbjct: 2350 RMLDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPR 2409
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + ASD D R+ Y I +GN + F +D SG
Sbjct: 2410 GHFVTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSG 2449
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ ND+ P +P+Y A + E+ + ++Q+ A D D + + Y I AGN
Sbjct: 1552 VIVNVEDANDHSPYFTNPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTG 1611
Query: 129 SYFNID 134
+ F I+
Sbjct: 1612 NMFKIE 1617
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + E+ S ++ + A+ D+ + I+Y I +GN + F I+ TGG
Sbjct: 3241 YLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPK---TGGISVSE 3297
Query: 62 ------PDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ YL+V I + +VNDN P VY A I E+
Sbjct: 3298 VLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISEDALVG 3357
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++ L A D D P+ +I + I G+ ++ F +D
Sbjct: 3358 DSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVD 3392
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGN 126
+V ++V ++NDN P+ VY + E+ + L+ D D D ++++SY I+ GN
Sbjct: 2909 LVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGN 2968
Query: 127 PESYFNI 133
P F +
Sbjct: 2969 PRGRFAL 2975
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 58 LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
LTG +V V + V +VNDN P+ P Y + E P++Q+ + D D + ++
Sbjct: 2264 LTGARAEV--TVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSIDADSENNKM 2321
Query: 118 ISYKI--SAGNPESYFNIDIGSG 138
+ Y+I N YF+ID SG
Sbjct: 2322 VHYQIVQDTYNSTDYFHIDSSSG 2344
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNP---------ESYFNIDIG 55
VY + E+ + L+ D D D ++++SY I+ GNP +S + + +
Sbjct: 2928 VYRGNVKESDPPGEVVAVLSTWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVK 2987
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Y + V + V +VNDN P+ Y A + E+
Sbjct: 2988 RPLDREEQDIYFLNITATDGLFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIPSNKI 3047
Query: 102 IVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
I++++A D D+ + I Y + +GN E F +D SG L
Sbjct: 3048 ILKVSAKDADIGSNGYIRYSLYGSGNSE--FFLDPESGEL 3085
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYY 89
LD +Q+ SY IS +D + G L V I V ++NDN P+ Y
Sbjct: 3193 LDREQQSSYNISVR----------ATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYL 3242
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ S ++ + A+ D+ + I+Y I +GN + F I+ +G +
Sbjct: 3243 VTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKINPKTGGI 3293
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSD-------- 57
Y A++ EN + ++ + A+DGD +ISY I + F ID
Sbjct: 2500 TYVAEVRENVAAGTKVIHVRATDGDPGTYGQISYAIINDFAKDRFLIDSNGQVITTERLD 2559
Query: 58 ---------------LTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
L GG + V + V + NDN P + Y A + + +
Sbjct: 2560 RENPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGHLV 2619
Query: 103 VQLAASDGDLDPDQRISYKI 122
Q+ A D D + RI+Y +
Sbjct: 2620 TQVQAIDPDDGANSRITYSL 2639
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 25/154 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
VY A I E+ ++ L A D D P+ +I + I G+ ++ F +D L ++
Sbjct: 3345 VYSAVISEDALVGDSVILLIAEDVDSQPNGQIHFSIVNGDRDNEFTVDPVLGLVKVKKKL 3404
Query: 66 ------------------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
V I + +VNDN P+ Y A I EN+
Sbjct: 3405 DRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQENKPVGTS 3464
Query: 102 IVQLAASDGD-LDPDQRISYKISAGNPESYFNID 134
I+QL +D D S+ I +GN E F +D
Sbjct: 3465 ILQLVVTDRDSFHNGPPFSFSILSGNEEEEFVLD 3498
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 37 ISYKISAGNPESYFNIDIGSDL--TGGP-----DQVYLI------------VYIQVQNVN 77
+ YK+S G YF I+ S L T P +VY + V I +++ N
Sbjct: 407 VEYKLSPGEDAVYFKINPRSGLIVTARPLNTVKKEVYKLEVTNKEGDLKAQVTISIEDAN 466
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
D+ P P+Y A + E+ ++ ++ASD D + I+Y I++ N
Sbjct: 467 DHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKDKGENGYITYSIASLN 515
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+++ A D D + ++ + IS GN +S FNID+ +G L
Sbjct: 745 ILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETGQL 783
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 21/135 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGGPDQ----VYLI----- 68
+ + ASD D R+ Y I +GN + F +D S L+ Q +Y +
Sbjct: 2413 VTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVITLSNHRKQRMEPLYSLNVSVS 2472
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
V+I+V N P Y A++ EN + ++ + A+DGD +IS
Sbjct: 2473 DGLFTSTAQVHIRVLGANLYSPAFSQSTYVAEVRENVAAGTKVIHVRATDGDPGTYGQIS 2532
Query: 120 YKISAGNPESYFNID 134
Y I + F ID
Sbjct: 2533 YAIINDFAKDRFLID 2547
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQ 72
N+ GI I Q G + D+R+ + S P +F + L D V+ + V I+
Sbjct: 2751 NKGGIFVIEQ---ETGTIKLDKRLDRETS---PAFHFKVAATIPL-DKVDIVFTVDVDIK 2803
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESY- 130
V ++NDN P+ Y I+E + Q+ A D D + +++Y + S PE
Sbjct: 2804 VLDLNDNKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVM 2863
Query: 131 --FNIDIGSG 138
FNID +G
Sbjct: 2864 EAFNIDSNTG 2873
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-----------SAGN---PESY- 49
P Y A V+ + G L I Q+ A D D P+ ++Y + ++GN E++
Sbjct: 2088 PYYAAVQVDAEPGTL-IYQVTAIDKDKGPNGEVTYVLQDDYGHFEINPNSGNVILKEAFN 2146
Query: 50 ---FNIDIGSDLT---GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
NI+ G + GG + V + + VN +P+ P Y A + E+ PI+
Sbjct: 2147 SDLSNIEYGVTILAKDGGKPSLSTSVELPITIVNKAMPVFDKPFYTASVNEDIRMNTPIL 2206
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ A+ + Q I Y I G+P FNID +G L
Sbjct: 2207 SINATSPE---GQGIIYIIIDGDPFKQFNIDFDTGVL 2240
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 53
+P+Y A + E+ + ++Q+ A D D + + Y I AGN + F I+
Sbjct: 1568 NPLYEASVFESAALGSAVLQVTALDKDKGENAELIYTIEAGNTGNMFKIE 1617
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN------------------- 45
P+Y A + E+ ++ ++ASD D + I+Y I++ N
Sbjct: 475 PLYDAYVNESVPVGTSVLTVSASDKDKGENGYITYSIASLNLLPFVINQFTGVISTTEEL 534
Query: 46 -----PESYFNIDIGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
PE Y I SD G P + + V I++ NVNDN P+ + V ++
Sbjct: 535 DFESSPEIYRFIVRASDW-GSPYRHESEVNVTIRIGNVNDNSPL-FEKVACQGVISYDFP 592
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A S D+D + + YKI +GN +F ++ SG L
Sbjct: 593 VGGHIT-AVSAIDIDELELVKYKIISGNELGFFYLNPDSGVL 633
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 24/116 (20%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD +QR Y +S ++T G + V+I+V + NDN P P Y
Sbjct: 1421 LDAEQRSIYNMSV-------------EVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDV 1467
Query: 91 QIVENQSGILP---IVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSGSL 140
I E+ +LP I+Q+ A+ D D ++SY + + F ID +G L
Sbjct: 1468 TISED---VLPDTEILQIEAT--DRDEKHKLSYTVHSSIDSISMRKFRIDPSTGVL 1518
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNPESYFNI-DIGS----- 56
D VY ++ EN+ ++ + A D D +D + +I+Y I+ G+ F + D GS
Sbjct: 1087 DFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLS 1146
Query: 57 DLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
L Y + VYIQV+N NDN+P+T PVYY + E
Sbjct: 1147 QLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVEN 1206
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ I+ L A D D+DP Q I+Y I +GN YF ID +G
Sbjct: 1207 VEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTG 1245
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---- 56
+T PVYY + E + I+ L A D D+DP Q I+Y I +GN YF ID +
Sbjct: 1189 LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIK 1248
Query: 57 ------DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVEN 95
D + + + + + V ++NDN P VY Q+ +
Sbjct: 1249 TTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSS 1308
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ I Q+ A D D + RI+Y I +G ++ F ID G +
Sbjct: 1309 ATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHI 1353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA- 124
Y V I V++ NDN P + Y A + EN ++ +V+++A+D D P+ I Y + +
Sbjct: 2859 YADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESD 2918
Query: 125 -GNPESYFNIDIGSG 138
N ++ F+IDI SG
Sbjct: 2919 TENIQNIFDIDIYSG 2933
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI------------------ 52
+ EN + Q+ A D D D ++ Y IS GN ++ F I
Sbjct: 1413 LTENDKPGFLVTQILAVDDDND---QLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQ 1469
Query: 53 ---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
++ +T G + + +QV ++NDN P VY+ I EN I+QL A+D
Sbjct: 1470 QSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATD 1529
Query: 110 GDLDPDQRISYKISAG-NPES--YFNIDIGSGSL 140
D D+++ Y + A +P S F ID SG++
Sbjct: 1530 R--DEDKKLFYHLHATQDPSSLALFRIDSISGNV 1561
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y +I+EN + + ++ A+ D+ + I Y I +GN + F +D + + L
Sbjct: 3294 YSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLD 3353
Query: 60 GGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ Y + V I + ++NDN P L +Y + E+ I
Sbjct: 3354 YEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKI 3413
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + A+D D D + ++Y I G+ F+ID +G++
Sbjct: 3414 LDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTIS 3452
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPE----------------------SYFNIDIGSDL 58
I ++ A D D +++I Y + N + S FN+ + ++
Sbjct: 3204 ITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAED 3263
Query: 59 TGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G P V + + ++NDN P Y +I+EN + + ++ A+ D+ +
Sbjct: 3264 CGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNAD 3323
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + F +D +G L
Sbjct: 3324 IHYFIMSGNEQGKFKMDSTTGDL 3346
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQI-VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129
I V +VNDN P+ ++ YYA + +++ G + I+Q+ A D D + + Y++ GN E
Sbjct: 2125 ISVLDVNDNCPLFVNMPYYATVSIDDPKGTI-IMQVKAIDLDSAENGEVRYELKKGNGE- 2182
Query: 130 YFNIDIGSGSLG 141
F +D SG L
Sbjct: 2183 LFKLDRKSGELS 2194
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 50 FNIDIGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ + ++ G P + Y V IQ++ + N+P+ +Y I E +P+++L S
Sbjct: 363 YNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIRLKVS 422
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D DL + + +I GN F I+ SG L
Sbjct: 423 DPDLGKNALVYLEIVGGNEGDEFRINPDSGML 454
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 27/156 (17%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNIDIGSDL--- 58
+ Y A + EN ++ +V+++A+D D P+ I Y + + N ++ F+IDI S
Sbjct: 2878 NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITL 2937
Query: 59 --------------------TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
G P + V I++ + NDN P+ P+ + EN
Sbjct: 2938 LTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENAL 2997
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ L D D++ Q + + I +G+ ++ F I
Sbjct: 2998 PGTVLINLLLIDPDIEK-QEMDFFIVSGDKQAQFQI 3032
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
Q + + I V+++NDN P Y ++ +S + S D D ISY++S
Sbjct: 591 QTEIKLSIVVKDINDNRPQFERVNCYGKVT--KSAPMGTEVFVTSAIDFDAGDIISYRLS 648
Query: 124 AGNPESYFNIDIGSGSLG 141
GN + FN+D SGSL
Sbjct: 649 DGNEDGCFNLDPTSGSLS 666
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------- 58
+Y I E +P+++L SD DL + + +I GN F I+ S +
Sbjct: 401 IYEVSIPETAPINMPVIRLKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQL 460
Query: 59 -------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G Q V I VQ++NDN P+ + I EN
Sbjct: 461 DAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAG 520
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+V+L A D D + ISY I+ N F ID SG
Sbjct: 521 SFVVKLTAKDRDSGENSYISYSIANLNAVP-FEIDHFSG 558
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 66 YLIVY---IQVQNVNDNVPMTLDPVYYAQI----VENQSGILPIVQLAASDGDLDPDQRI 118
Y ++Y I V+++NDN P ++P Y+ ++ V Q LP A D D+ +
Sbjct: 2445 YKLIYDSIIPVKDLNDNAPCFVEPSYFTKVSVAAVRGQFVALP----KAYDKDISDTDSL 2500
Query: 119 SYKISAGNPESYFNIDIGSG 138
YKI GN ++ID +G
Sbjct: 2501 EYKIVYGNELQTYSIDKLTG 2520
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 15 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQ 74
+SGIL + LD + YK+ A ++ G D T + + + I V
Sbjct: 3133 ESGILKVASA------LDRETTPKYKLVA-------HVQDGKDFT---QECFSEIIITVN 3176
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
++NDN+P+ Y + E+ I ++ A D D +++I Y + G YF I
Sbjct: 3177 DINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSL-MGENHDYFKIS 3235
Query: 135 IGSG 138
+G
Sbjct: 3236 KSTG 3239
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY---KIS 123
+++ + + +VND P +Y I EN S I+++ A+D D + ++SY I+
Sbjct: 2322 VVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESIN 2381
Query: 124 AGNPESYFNIDIGSGSL 140
N F ID+ G+L
Sbjct: 2382 GQNNSELFYIDVTDGNL 2398
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPES--YFNIDIGSD---LT 59
VY+ I EN I+QL A+D D D+++ Y + A +P S F ID S +T
Sbjct: 1507 VYHVNISENIEEESVIMQLHATDR--DEDKKLFYHLHATQDPSSLALFRIDSISGNVIVT 1564
Query: 60 GGPD-----QVYLIVYIQ----------------VQNVNDNVPMTLDPVYYAQIVENQSG 98
D Q LIV+++ V + ND+ P + +++ E+ +
Sbjct: 1565 QRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAI 1624
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+ ++ A D D + I Y I GN S F ID
Sbjct: 1625 GSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEID 1660
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 23/111 (20%)
Query: 31 LDPD---QRISYKISAGNPESYFNIDIGSDL--------------------TGGPDQVYL 67
+DPD Q + + I +G+ ++ F I +L T G
Sbjct: 3008 IDPDIEKQEMDFFIVSGDKQAQFQIGKSGELFIAKPLDREQLMFYNLSIIATDGKFTAKA 3067
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V I V+++NDN P L P Y+ E+ S +V++ A D D R
Sbjct: 3068 NVEIDVKDINDNTPYCLKPRYHISTNESISIGTTLVEVKAIDFDFQSKLRF 3118
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVEN--QSGILPIVQLAASDGDLDPDQRISYKISAG 125
+VY+ V +VNDN P+ Y ++ E+ + +L +++ A D D+ P+ I + +
Sbjct: 962 LVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIE--AVDEDIGPNAEIQFSLKEE 1019
Query: 126 NP-ESYFNIDIGSGSL 140
E F ID +G++
Sbjct: 1020 TQDEELFRIDKHTGAI 1035
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 35/164 (21%)
Query: 3 LDPVYYAQI----VENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
++P Y+ ++ V Q LP A D D+ + YKI GN ++ID L
Sbjct: 2466 VEPSYFTKVSVAAVRGQFVALP----KAYDKDISDTDSLEYKIVYGNELQTYSID---KL 2518
Query: 59 TG------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
TG G Y + I + N P+ Y AQ+ E
Sbjct: 2519 TGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLPENVYSPLFDQSTYEAQVPE 2578
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
N I+ + ASDGD + Y+I + + F ID +G
Sbjct: 2579 NLLHGHNIITVKASDGDFGTYANLYYEIVSEEMKKIFLIDQTTG 2622
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P ++ +YI+V++VNDN P T +PVYY +I+EN + +VQ+ A D D + ++ YK
Sbjct: 1118 PLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYK 1177
Query: 122 ISAGNPESYFNIDIGSG 138
I++GNP+ +F+I +G
Sbjct: 1178 ITSGNPQGFFSIHPKTG 1194
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 32/169 (18%)
Query: 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG 61
T +PVYY +I+EN + +VQ+ A D D + ++ YKI++GNP+ +F+I + L
Sbjct: 1139 TSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITT 1198
Query: 62 -------------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
P V +++ + NDN P L Y ++ E +
Sbjct: 1199 TSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLPERE 1258
Query: 97 -------SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ P+ + A+D D P+ ISY I GN F I+ +G
Sbjct: 1259 KPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTG 1307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT---------- 59
Q+ ENQ ++ + ++D D + ++ Y +S GN +S F ID+ + +
Sbjct: 725 QVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRET 784
Query: 60 -------------GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
G P + + ++++ V + NDN P L Y+ ++ E++ I+Q+
Sbjct: 785 TDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQV 844
Query: 106 AASDGDLDPDQRISYKI 122
A+D DL P+ ++Y I
Sbjct: 845 EATDKDLGPNGHVTYSI 861
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY--FNIDIGSDLT------------------- 59
+VQ+ A+D D +P++ ISY++ + +S+ F++D + L
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ---GGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
GG + +IV + V ++NDN P+ +Y A+I E+ + + A D D
Sbjct: 2362 AVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGHFVTCVKAYDADSSD 2421
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++ Y I +GN +F ID +G
Sbjct: 2422 IDKLQYSILSGNDHKHFVIDSATG 2445
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y A+I E+ P+V + A+ + ++ Y I+ G+P S F I+ +
Sbjct: 2185 PFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241
Query: 57 -----------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
LTG +V+ V I V ++NDN P+ Y + E
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVF--VDIIVDDINDNPPVFAQQSYAVTLSEASVIG 2299
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPES--YFNIDIGSG 138
+VQ+ A+D D +P++ ISY++ + +S +F++D +G
Sbjct: 2300 TSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTG 2340
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI-------- 54
L Y+ ++ E++ I+Q+ A+D DL P+ ++Y I F+ID
Sbjct: 823 LQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTDT--DTFSIDSVTGVVNIA 880
Query: 55 ----------------GSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
D Q++ ++V + +++VNDN P + P Y ++ E+
Sbjct: 881 RPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDL 940
Query: 97 SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+ L A D DL ++ Y + + E F++D SG++
Sbjct: 941 PEGTVIMWLEAHDPDLGQSGQVRYSL-LDHGEGNFDVDKLSGAV 983
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------GGPDQVYLIVY-- 70
++Q+ A+ D++ + I+Y I +GN F+ID + + YL V
Sbjct: 3249 VLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEAT 3308
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V ++NDN P+ Y I E+ ++ + A D D +
Sbjct: 3309 DGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNS 3368
Query: 117 RISYKISAGNPESYFNID 134
I Y I GN S F ID
Sbjct: 3369 HIHYSIIDGNQGSSFTID 3386
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V IQV++ NDN P+ Y A IVEN G ++Q+ ASD D + ++ Y +
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSL 2848
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 VYYAQIVEN--QSGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID--------- 53
+Y + E+ Q G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2922 IYKGTVSEDDPQGGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVY 2979
Query: 54 --------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ T G IV ++V + NDN P+ +Y I E+ +
Sbjct: 2980 VKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---V 3036
Query: 100 LP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIG 136
LP I+Q++A+D D+ + I+Y + E + N D G
Sbjct: 3037 LPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTG 3077
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ Y A + E+ ++Q+ A+ D++ + I+Y I +GN
Sbjct: 3216 VIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEH 3275
Query: 129 SYFNIDIGSGSL 140
F+ID +G++
Sbjct: 3276 GKFSIDSKTGAV 3287
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++ND P+ P+Y A ++ + ++ + A+D D ++ Y I+ GN
Sbjct: 1865 VTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYSITEGNIG 1924
Query: 129 SYFNIDIGSGSL 140
F++D +G+L
Sbjct: 1925 EKFSMDYKTGAL 1936
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 26/130 (20%)
Query: 18 ILP---IVQLAASDGDLDPDQRISYKISAGNPESY-FNIDIGSDLTGGP-DQVYLIVY-- 70
+LP I+Q++A+D D+ + I+Y + E + N D G T P D+ VY
Sbjct: 3036 VLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 71 -----------------IQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDL 112
+ +++VNDN P + DP Y + EN + ++ A+D D
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADP-YAITVFENTEPGTLLTRVQATDADA 3154
Query: 113 DPDQRISYKI 122
+++I Y +
Sbjct: 3155 GLNRKILYSL 3164
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS--------GILPIVQLA 106
G+++ G ++V++Q + NDN P+ + Y I E+ S +P+V +
Sbjct: 1739 GTNMAGLSTNTTVLVHLQ--DENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLV-IR 1795
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D D + + Y I + +YF ID +G++
Sbjct: 1796 AADADKDSNALLVYHIVEPSVHTYFAIDSSTGAI 1829
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 37 ISYKISAGNPESYFNIDIGS---------------------DLTGGPDQVYLIVYIQVQN 75
+ + I+ GN +S+F++D G+ + T G + V+I+V +
Sbjct: 1389 LWFDITGGNYDSHFDVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVID 1448
Query: 76 VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY--FNI 133
ND+ P Y I E+ + I+Q++A D D + ++ I S+ +P S F +
Sbjct: 1449 TNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQD-EKNKLIYTLQSSRDPLSLKKFRL 1507
Query: 134 DIGSGSL 140
D +GSL
Sbjct: 1508 DPATGSL 1514
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 33/159 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP----ESY-FNIDIGSDLT-- 59
Y A IVEN G ++Q+ ASD D + ++ Y + ES+ N++ G T
Sbjct: 2814 YEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLK 2873
Query: 60 -------------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN--Q 96
G Q+ IV + V +VND+ P +Y + E+ Q
Sbjct: 2874 ELDHEKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQ 2933
Query: 97 SGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNID 134
G++ I L+ +D D + +++++Y I+ G+P F ++
Sbjct: 2934 GGVIAI--LSTTDADSEEINRQVTYFITGGDPLGQFAVE 2970
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 25/139 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------IGSDLT---- 59
++ + A D D + I Y I GN S F ID G LT
Sbjct: 3354 VITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQAS 3413
Query: 60 --GGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD- 115
G P +V V I V +VNDN P+ Y I EN+ ++QL +D D +
Sbjct: 3414 DNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNG 3473
Query: 116 QRISYKISAGNPESYFNID 134
+ I GN E F ++
Sbjct: 3474 PPFFFTIVTGNDEKAFEVN 3492
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--------IVQLAASDGDLDPD 115
+V ++ I + N+NDN P+ + +I N G +P I ++A D D
Sbjct: 550 EVEVLATITLNNLNDNTPL------FEKI--NCEGTIPRDLGVGEQITTVSAIDAD--EL 599
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
Q + Y+I AGN +F+++ SG L
Sbjct: 600 QLVQYQIEAGNELDFFSLNPNSGVL 624
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
++ +VN ++P + Q+ ENQ ++ + ++D D + ++ Y +S GN
Sbjct: 702 IFFDSHSVNAHIPQFRSTLPTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNE 761
Query: 128 ESYFNIDIGSGSL 140
+S F ID+ +G L
Sbjct: 762 DSCFMIDMETGML 774
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
+ + + V + ND+ P Y ++ E+ + ++Q+ A D D + + Y I +G
Sbjct: 1545 FARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESG 1604
Query: 126 NPESYFNIDIGSGSL 140
N + F ID GS+
Sbjct: 1605 NIGNSFMIDPVLGSI 1619
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +N +P+ P Y A+I E+ P+V + A+ + ++ Y I+ G+P
Sbjct: 2168 VIVPITVMNKAMPVFEKPFYSAEIAESIQVHSPVVHVQANSPE---GLKVFYSITDGDPF 2224
Query: 129 SYFNIDIGSG 138
S F I+ +G
Sbjct: 2225 SQFTINFNTG 2234
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ S G+P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP V++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGAL 456
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G P V +V +QV ++NDN P+ + + A ++E+
Sbjct: 464 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y+++ + F I+ G+G
Sbjct: 524 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTG 560
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ P+ L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKI---SAGNPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ S G+P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSG 347
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 865 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 908
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 909 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 968
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 969 FQLDIFSGEL 978
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ +V ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 717 YTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYE 776
Query: 63 DQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV + I V +VNDN P L Y + E+ ++Q
Sbjct: 777 DQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQ 836
Query: 105 LAASDGDLDPDQRISY 120
++A+D D + R+ Y
Sbjct: 837 ISATDRDSGLNGRVFY 852
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P P Y ++ E+ + +V ++A D D I+Y+I++GN
Sbjct: 596 VSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRDAHSVITYQITSGNTR 653
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 654 NRFSITSQSG 663
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y ++ E+ + +V ++A D D I+Y+I++GN + F+I
Sbjct: 613 PEYTVRLNEDAAVGTSVVTVSAVD--RDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 670
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ + G Q + + V + N + P+ Y + E++
Sbjct: 671 LPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTT 730
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++A+D D + RI+Y + P+ F ID +G++
Sbjct: 731 VVLISATDEDTGENARITYFMEDSIPQ--FRIDADTGAV 767
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 74 QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESY 130
+NVN P P Y A + ENQ P+ L A D D R+ Y + A +
Sbjct: 173 RNVN-TAPQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQF 231
Query: 131 FNIDIGSGSL 140
F++D +G++
Sbjct: 232 FSLDPVTGAV 241
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 34/171 (19%)
Query: 4 DPVYYAQ-----IVENQSGILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIG 55
DPV+ Q + EN ++ + A+DGD P+ I Y++ G +P F ID
Sbjct: 286 DPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPR 345
Query: 56 SDLT--------------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
S + GP IV++ V++ NDN P + Y
Sbjct: 346 SGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYV 405
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
Q+ E+ + P++++ ASD D + + Y I +GN F +D +G+L
Sbjct: 406 VQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGAL 456
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 866 IVESTSGIVRTLR------RLDRENVAQYVLRA------YAVDKGMP----PARTPMEVT 909
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V + NDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 910 VTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 969
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 970 FQLDIFSGEL 979
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y Q+ E+ + P++++ ASD D + + Y I +GN F +D
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 54 ----------IGSDLTGGP--DQVYLIVYIQVQNVND-NVPMTLDPVYYAQIVENQSGIL 100
I + G P V +V +QV ++ND P+ + + A ++E+
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGY 523
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ + F I+ G+G
Sbjct: 524 LVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTG 561
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 30/164 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNID-------- 53
P Y A + ENQ + L A D D R+ Y + A +F++D
Sbjct: 184 PSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGVVTT 243
Query: 54 ---------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
+ + G P + L + I V + ND+ P+ Y + EN
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAG---NPESYFNIDIGSG 138
++ + A+DGD P+ I Y++ G +P F ID SG
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSG 347
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 22/130 (16%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI 68
E++ +V ++A+D D + RI+Y + P+ + D G+ T DQV
Sbjct: 724 EDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYT 783
Query: 69 VYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 110
+ I V +VNDN P L Y + E+ ++Q+ A+D
Sbjct: 784 LAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILATDR 843
Query: 111 DLDPDQRISY 120
D + R+ Y
Sbjct: 844 DSGLNGRVFY 853
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + + +VNDN P P Y ++ E+ + +V ++A D I+Y+I++GN
Sbjct: 597 VSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAV--DRHAHSVITYQITSGNTR 654
Query: 129 SYFNIDIGSG 138
+ F+I SG
Sbjct: 655 NRFSITSQSG 664
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLD 600
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y + IQV ++ND+ P+ + + ++EN
Sbjct: 601 FEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLENAPLGHS 660
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ ++ F I+ +G
Sbjct: 661 VIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATG 697
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAARTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGMGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNQTSGEL 1219
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE------SYFNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G+P + F ID S L
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSGLIS 487
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 488 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 547
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 548 DVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEI 593
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 957 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1016
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1017 DREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1076
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGEL 1115
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 23/141 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP----DQVYLI-------- 68
+V ++ASD D+ + RI+Y + P+ + D G+ P DQV
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 69 ----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
V + V +VNDN P + Y + E+ ++Q++A+D D + R+
Sbjct: 928 GIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQISATDRDAHANGRV 987
Query: 119 SYKISAG-NPESYFNIDIGSG 138
Y G + + F I+ SG
Sbjct: 988 QYTFQNGEDGDGDFTIEPTSG 1008
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID + + L
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLD 600
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ Y + IQV ++ND+ P+ + + ++EN
Sbjct: 601 FEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLGHS 660
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ ++ F I+ +G
Sbjct: 661 VIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATG 697
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G+P + F ID SG
Sbjct: 441 YPILQLRATDGDAPPNANLRYRF-VGSPAVRTAAAAAFEIDPRSG 484
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 752 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 809
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 810 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSMNEDRPVGST 867
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 868 VVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 904
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1077 VAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1137 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1194
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1195 DHLFYSFERGNELQLLVVNRTSGEL 1219
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY------FNIDIGSDLTG 60
Y + EN PI+QL A+DGD P+ + Y+ G P + F ID S L
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSGLIS 496
Query: 61 --------------------------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
GP + V+I V + NDN P + Y AQ+ E
Sbjct: 497 TSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRE 556
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++++ A+D D D + + Y I +GN +F ID +G +
Sbjct: 557 DVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEI 602
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-NPESYFNIDIGS--------- 56
Y + E+ ++Q++A+D D + R+ Y G + + F I+ S
Sbjct: 966 YTGLVSEDAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRL 1025
Query: 57 --------DLTG-------GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT P + + + + VQ+VNDN P+ + ++ EN
Sbjct: 1026 DREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSV 1085
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ Q+ A D D P+ I Y+I GN F +DI SG L
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGEL 1124
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVY 66
Y AQ+ E+ ++++ A+D D D + + Y I +GN +F ID LTG V
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID---SLTGEIQVVA 606
Query: 67 LIVY----------------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+ + IQV ++ND++P+ + + ++EN
Sbjct: 607 PLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPL 666
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D + R+ Y ++ P++ F I+ +G
Sbjct: 667 GHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATG 706
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ IV ++ASD D+ + RI+Y + P+ + D G+ P
Sbjct: 863 YSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYE 922
Query: 63 DQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQV V + V +VNDN P + Y + E+ ++Q
Sbjct: 923 DQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTSVLQ 982
Query: 105 LAASDGDLDPDQRISYKISAG-NPESYFNIDIGSG 138
++A+D D + R+ Y G + + F I+ SG
Sbjct: 983 ISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSG 1017
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-------------------- 46
Y+ ++ E+ + +V + A D D + ISY+I+ GN
Sbjct: 761 YHLRLNEDAAVGTSVVSVTAVD--RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALP 818
Query: 47 -----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
E YF + + + D Y V+I + + N + P+ Y + E++
Sbjct: 819 LDYKQERYFKLVLTASDRALHDHCY--VHINITDANTHRPVFQSAHYSVSVNEDRPMGST 876
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IV ++ASD D+ + RI+Y + P+ F ID SG++
Sbjct: 877 IVVISASDDDVGENARITYLLEDNLPQ--FRIDADSGAI 913
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNPESY--FNIDIGSDLT---- 59
Y + EN++ ++++ A D D R+ Y ++A N S F+ID S L
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 60 -------------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G P +V + V + ND+ P+ Y + EN
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSG 138
PI+QL A+DGD P+ + Y+ G P + F ID SG
Sbjct: 450 YPILQLRATDGDAPPNANLRYRF-VGPPAARAAAAAAFEIDPRSG 493
Score = 37.4 bits (85), Expect = 0.032, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------DLTGGPDQVYLI----- 68
+ Q+ A D D P+ I Y+I GN F +DI S DL Q Y+I
Sbjct: 1086 VAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Query: 69 ---------VYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILP---IVQLAASDGDLDPD 115
V++++ + NDN P+ + + + V N+S P I ++ A D D+
Sbjct: 1146 SAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPDV--S 1203
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+ Y GN ++ SG L
Sbjct: 1204 DHLFYSFERGNELQLLVVNQTSGEL 1228
>sp|Q99PF4|CAD23_MOUSE Cadherin-23 OS=Mus musculus GN=Cdh23 PE=1 SV=2
Length = 3354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY + E+ +V L +D D+ + +SY I+AGN + F++
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 54 -------------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
+G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1059 DRETTAAYTLVLEAIDNGPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1113
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F I +GSG L
Sbjct: 1114 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLL 1159
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I I G
Sbjct: 598 YSIVNASAFGSYFDISIYEG 617
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNEDMTFRMDRISGEIA 1586
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1592
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E I
Sbjct: 1593 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTINT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1653 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINKHTG 1690
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D R+ Y+I GN + F I +GS L
Sbjct: 1121 IVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVGSGLLMRGPRPLDRERNSSHVLMVEA 1180
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND P+ Y + +GI ++ + A+D D
Sbjct: 1181 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDKDTGD 1240
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y+I +G E F ID +G
Sbjct: 1241 GGLVNYRILSG-AEGKFEIDESTG 1263
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+I+E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 895 FVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 954
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y ++V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1045
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1815 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHVL 1874
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1875 ASDADSGCNALLTFNITAGNRERAFFINATTG 1906
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I I
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ ++EN
Sbjct: 626 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVLENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 728
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2072 PTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2131
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P IV I + ++ND+ P L+P+ ++E+
Sbjct: 2132 IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGT 2191
Query: 101 PIVQLAASDGDLDPDQRISYKI 122
I + A D DL+P ++ Y I
Sbjct: 2192 IIANVTAIDLDLNP--KLEYHI 2211
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++I + + NDN P P Y ++EN ++Q+ A+D D + + Y+I AG +
Sbjct: 2055 LFITILDDNDNWPTFSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQD 2114
Query: 129 SYF 131
+
Sbjct: 2115 RFL 2117
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +VND P P + + EN+ ++ + A+D D + +++Y + E
Sbjct: 2495 VVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGME 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FSVDMDSG 2563
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ + ++NDN P + + A+I+E + + Q+ A D D + +SY++ G P
Sbjct: 876 VFVNLLDLNDNDPTFRNLPFVAEILEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPR 935
Query: 129 SYFNIDIGSG 138
F I+ SG
Sbjct: 936 MDFVINSTSG 945
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VNDN P + Y +I EN PI + A+D DL + Y P
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP--PS 175
Query: 129 SYFNIDIGSG 138
+F ID G
Sbjct: 176 PFFAIDSARG 185
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 49 YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+ N + + G P + I VY+++ ++NDN P+ P Y + E+ + I+++ A
Sbjct: 2367 WLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDIAVGTVILRVTA 2426
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D I Y + G E F I+ +G +
Sbjct: 2427 TDADSGNFALIEYSLVDG--EGKFAINPNTGDI 2457
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D + +++ I+AGN E F I+ + D P+
Sbjct: 1870 VAHVLASDADSGCNALLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYRLTVSVK 1929
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASD 109
+ + ++ + + + NDN P+ + Y A+++EN P+ L A D
Sbjct: 1930 DNPENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPILALD 1989
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D ++Y++ G F ID +G
Sbjct: 1990 ADEDVYAVVTYQL-LGTHSDLFVIDNSTG 2017
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP 62
P + + EN+ ++ + A+D D + +++Y + E+ F++D+ S L T P
Sbjct: 2512 PQFSTSVYENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEA-FSVDMDSGLVTTQRP 2570
Query: 63 DQVY--------------------LIVYIQVQNVNDNVPMTLDP-----VYYAQIVENQS 97
Q Y ++ ++V +VNDN P+ + P ++ + + +S
Sbjct: 2571 LQSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIKEEIPLRS 2630
Query: 98 GILPIVQLAASDGD--LDPDQRISYKISAGNPE-SYFNIDIGSG 138
+ ++ A+D D L+ R S+ + GN + YF ID SG
Sbjct: 2631 NVY---EVYATDNDEGLNGAVRYSFLKTTGNRDWEYFTIDPISG 2671
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 62 PDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
PD V Y V I + N NDN P+ P+Y + EN + ++ + A+D D+ ++Y
Sbjct: 438 PDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNY 497
Query: 121 KISAGNPESYFNIDIGSG 138
S +P+ F++D +G
Sbjct: 498 FFS-DDPDR-FSLDKDTG 513
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN P++ + A D D D + Y + AG F+I+
Sbjct: 1036 VYQGQVQENSPAGTPVMVVTAQDDDSGLDGELQYFLRAGTGLETFSINQDTGMLETLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y ++E+
Sbjct: 1096 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN +F + +G L
Sbjct: 1156 VLQLEAWDPDSSSQGKLTFNLTSGNHLGHFIVHPFTGLL 1194
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2276 VYTTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 2336 ELDYETHQHFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D+ R+ Y I +GN + +F+I+ SG
Sbjct: 2396 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSG 2434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2778 DLVSLVSVSIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2837
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2838 LSVEPGSNIHELFAVDSESG 2857
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------------- 56
P+ +LAA+D D ++ Y IS GN E F+I++ +
Sbjct: 733 PLARLAATDPDTGFHGKLVYVISDGNEEGCFDIELETGLLMVAAALDYETTSFYVLNVTV 792
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
DL P + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPPKSSWKLLTVTVKDWNDNPPRFPPGGYQLTISEDTEVGTTIAELKTEDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
+R+ Y + P F++ +G L
Sbjct: 853 RRVRYTLLT--PTEKFSLHPFTGEL 875
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y ++E+ ++QL A D D ++++ +++GN +F + + L Q
Sbjct: 1140 PVFYPSVLEDAPLGTSVLQLEAWDPDSSSQGKLTFNLTSGNHLGHFIVHPFTGLLTTAKQ 1199
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ Y++ V + + +VNDN PM ++ ++ E S +
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLSPLS 1259
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + ++Y I + ES F ID +G
Sbjct: 1260 PEPVYRLVASDPDEGLNGSVTYSIEESDEES-FRIDPVTG 1298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
+VE+ G Q+ G L ++ + ++ AG S++ D G L+ + V
Sbjct: 964 LVEDAHGTF---QVHPMTGALSLEKELDFERRAGYNLSFWASDSGKPLS---RRTLCHVE 1017
Query: 71 IQVQNVNDNV--PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ V +VN+N+ P VY Q+ EN P++ + A D D D + Y + AG
Sbjct: 1018 VLVMDVNENLHSPHFSSFVYQGQVQENSPAGTPVMVVTAQDDDSGLDGELQYFLRAGTGL 1077
Query: 129 SYFNIDIGSGSL 140
F+I+ +G L
Sbjct: 1078 ETFSINQDTGML 1089
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D+ R+ Y I +GN + +F+I+ S +
Sbjct: 2381 EPQYEANVSELATCGHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFN 2440
Query: 59 -------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ VYI N N P VY A++ EN +
Sbjct: 2441 LCKKQLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 2501 IELLAIDKDSGPYGTVDYTI 2520
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2802 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWIT 2860
Query: 57 ---DLTGGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2861 TLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNI 133
+ L D D+ D +++++ I+ G+P F+I
Sbjct: 2921 NEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSI 2959
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 2174 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2231 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEI 2331
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 3286 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAVVGDVILT 3344
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F I+ G L
Sbjct: 3345 VSASDDDGPVNSAITYSLVGGNQLGHFTINPKKGKL 3380
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 29/156 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y A + + + ++Q+ A D D + I Y GN + +FNID
Sbjct: 1560 YEANVPDTTAPGTELLQVRAVDADRGANAEIHYSFLKGNSDGFFNIDSLLGIITVAQRLY 1619
Query: 54 ----------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ ++ G P + L +V I V + + P+ Y+ +I E+ PI
Sbjct: 1620 HVHLTRHALTVKAEDQGSPRRHDLALVVIHVHPSDSSAPVFSKDEYFIEIPESVPIGSPI 1679
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ L+A ++Y++ GN +S F+++ SG
Sbjct: 1680 LLLSAGSS-----SEVTYELREGNKDSVFSMNSYSG 1710
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDL-DPDQRISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ D +++++ I+ G+P F+I +G +
Sbjct: 2913 YRGSVVENNEPGELVATLKTLDADVSDQNRQVTCYITEGDPLGQFSISQVGDEWRISSRK 2972
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V + V ++NDN P +Y ++ E+ + I
Sbjct: 2973 TLDREHIAKYLLRVTASDGKFQASVPVEVFVVDINDNSPQCSQLLYTGKVREDVTPGHFI 3032
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A D D+D + +I+Y + G F +D +G L
Sbjct: 3033 LKVSAIDVDMDTNAQITYSLH-GPGAQEFKLDPHTGEL 3069
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
Y+ +I E+ PI+ L+A ++Y++ GN +S F+++
Sbjct: 1665 YFIEIPESVPIGSPILLLSAGSS-----SEVTYELREGNKDSVFSMNSYSGLISTQKRLD 1719
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSGI 99
GS++ G +V +VYI + NDN P P + I E S I
Sbjct: 1720 HEKVPSYRLRIRGSNMAGVFTEVVALVYII--DENDNPPAFGKPTFLGHISEAAPLHSLI 1777
Query: 100 L-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
L P+V + ASD D + + + YKI +F ID G+L
Sbjct: 1778 LGEDNSPLV-VRASDSDREANSLLVYKILEPEALKFFKIDPSMGTL 1822
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ--LAASDGDLDPDQRISYKISAGN 126
V ++++N+NDN PM + + ++ +P+ + +A S D+D Q + Y+I +GN
Sbjct: 550 VSLRLKNLNDNQPMFEEVNCTVSLRQD----VPVGKSIMAVSAIDMDELQNLKYEIVSGN 605
Query: 127 PESYFNIDIGSG 138
+ YF+++ SG
Sbjct: 606 EQDYFHLNHFSG 617
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P Y A + + + ++Q+ A D D + I Y G
Sbjct: 1538 FVWVTIHVEDGNLHSPHFTQLRYEANVPDTTAPGTELLQVRAVDADRGANAEIHYSFLKG 1597
Query: 126 NPESYFNID 134
N + +FNID
Sbjct: 1598 NSDGFFNID 1606
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
D+ P ++D I+E P+ +LAA+D D ++ Y IS GN E F+I++ +
Sbjct: 716 DHFPQSID------ILEQVPINTPLARLAATDPDTGFHGKLVYVISDGNEEGCFDIELET 769
Query: 138 GSL 140
G L
Sbjct: 770 GLL 772
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISA 124
+V + V++VNDN+P YY I Q G P + Q++A+D DL + ++Y +
Sbjct: 2055 LVRVSVEDVNDNIPEFQHLPYYTVI---QDGTEPGDVLFQVSATDKDLGANGSVTYGFAE 2111
Query: 125 GNPESYFNID 134
+YF ID
Sbjct: 2112 DY--AYFRID 2119
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 51/140 (36%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY A++ EN +++L A D D P + Y I F I+ +T
Sbjct: 2485 VYEAELAENAKVGTKVIELLAIDKDSGPYGTVDYTIINKLAGERFFINPRGQITTLQKLD 2544
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V I + + NDN P Y I N S PI
Sbjct: 2545 RENSTERVIAIKVMARDGGGKVAFCTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSPI 2604
Query: 103 VQLAASDGDLDPDQRISYKI 122
+Q+ A D D + ++Y +
Sbjct: 2605 IQVLAYDADEGRNADVTYSV 2624
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 50 FNI---DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
FNI D G+ + P +I I V++VND+ P + +Y +VE + ++ +
Sbjct: 1838 FNIYVHDQGTPILFAPRSAKVI--IHVRDVNDSPPRFSEQIYEVAVVEPIHPGMGLLTVQ 1895
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D R++Y I N + I +G +
Sbjct: 1896 AEDN----DSRVTYSIKTSNADEAVTIHPTTGQI 1925
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 24/155 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y ++ E+ + I++++A D D+D + +I+Y + + F +D
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLHGPGAQE-FKLDPHTGELTTLTVL 3075
Query: 54 ----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ GG V + +++VNDN P + +N + P+
Sbjct: 3076 DRERKDVYNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCDVAVFDNTTVKTPVA 3135
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + ++ Y ++ + + F+ID SG
Sbjct: 3136 VVFARDPDQGANAQVVYSLT-DSADGQFSIDATSG 3169
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
V + + + ND P+ P Y I E++ PI ++ A+D DL + Y +A
Sbjct: 134 VVVHILDQNDLKPLFSPPSYRVTISEDRPLKSPICKVTATDADLGQNAEFYYAFNA 189
>sp|P58365|CAD23_RAT Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1
Length = 3317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF--------------- 50
VY + E+ +V L +D D+ + +SY I+AGN + F
Sbjct: 997 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGL 1056
Query: 51 ----------------NIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
N+ +G TG V++ V +VNDN P+ L Y A + E
Sbjct: 1057 DRETTAAYTLVLEAIDNVPVGKRRTGTA-----TVFVTVLDVNDNRPIFLQSSYEASVPE 1111
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ IVQL A+D D R+ Y+I GN + F + + SG L
Sbjct: 1112 DIPEGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLL 1157
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ I+
Sbjct: 536 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNLIT 595
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I +A SYF+I + G
Sbjct: 596 YSIVNASAFGSYFDISVYEG 615
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + +VNDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1496 VASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVSVNENVGGGTSVVQVRATDRDI 1555
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1556 GINSVLSYYITEGNEDMTFRMDRISGEIA 1584
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1531 YNVSVNENVGGGTSVVQVRATDRDIGINSVLSYYITEGNEDMTFRMDRISGEIATRPAPP 1590
Query: 63 -----DQVYLI----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
+ +L+ VY+ + + NDN P+ P Y + E +
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTVNT 1650
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F I+ +G
Sbjct: 1651 SLITVQALDLDEGPNGTVTYAIVAGNIINTFRINRRTG 1688
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---TGGPD 63
+ A+++E + + Q+ A D D + +SY++ G P F I+ S + T D
Sbjct: 893 FVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGVVTTTAELD 952
Query: 64 QVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ + Y I+V +VND P VY + E+ +
Sbjct: 953 RERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1012
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+AGN + F++
Sbjct: 1013 VWLNCTDNDVGLNAELSYFITAGNVDGKFSV 1043
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 48 SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN + +
Sbjct: 1813 AFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVL 1872
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
ASD D + +++ I+AGN E F I+ +G
Sbjct: 1873 ASDADSGCNALLTFNITAGNRERAFFINATTG 1904
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ I+Y I +A SYF+I +
Sbjct: 564 YVGALRENEPSVTQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSR 623
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 624 PLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 683
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + S F I+ SG +
Sbjct: 684 AGATVLFLNATDLDRSREYGQESIIYSLEGSSQFRINARSGEI 726
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
IVQL A+D D R+ Y+I GN + F + + S L
Sbjct: 1119 IVQLKATDADEGEFGRVWYRILHGNHGNNFRLHVSSGLLVRGPRPLDRERNSSHVLMAEA 1178
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V++VND P+ Y + +GI ++ + A+D D
Sbjct: 1179 YNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDTGD 1238
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y+I +G E F ID +G
Sbjct: 1239 GGLVNYRILSG-AEGKFEIDESTG 1261
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 37/171 (21%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG-------------------- 44
P Y ++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2070 PAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVGNAT 2129
Query: 45 ----NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
ESY + +D P V I + ++ND+ P L+P+ ++E+
Sbjct: 2130 IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTEPGT 2189
Query: 101 PIVQLAASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
I + A D DL+P ++ Y I + + E F ++I +GS+
Sbjct: 2190 VIANVTAIDLDLNP--KLEYHILSIVAKDDTDRLVPDQEDAFAVNINTGSV 2238
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
++I + + NDN P P Y ++EN ++Q+ A+D D + + Y+I AG +
Sbjct: 2053 LFITILDDNDNWPTFSPPAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQD 2112
Query: 129 SYF 131
+
Sbjct: 2113 RFL 2115
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VNDN P + Y +I EN PI + A+D DL + Y P
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP--PS 175
Query: 129 SYFNIDIGSG 138
+F ID G
Sbjct: 176 QFFAIDSARG 185
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I+V +VND P P + + EN+ ++ + A+D D + +++Y + E
Sbjct: 2493 VVIRVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGME 2552
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2553 A-FSVDMDSG 2561
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ + ++NDN P + + A+++E + + Q+ A D D + +SY++ G P
Sbjct: 874 VFVNLLDLNDNDPTFQNLPFVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQVGMPR 933
Query: 129 SYFNIDIGSG 138
F I+ SG
Sbjct: 934 MDFVINSTSG 943
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D + +++ I+AGN E F I+ + D P+
Sbjct: 1868 VAHVLASDADSGCNALLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYRLTVSVK 1927
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL----AASD 109
+ + ++ + + + NDN P+ + Y A+++EN P+ L A D
Sbjct: 1928 DNPENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAEVMENSPAGTPLTVLNGPILALD 1987
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSG 138
D D ++Y++ G F ID +G
Sbjct: 1988 ADEDVYAVVTYQL-LGTHSDLFVIDNSTG 2015
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP 62
P + + EN+ ++ + A+D D + +++Y + E+ F++D+ S L T P
Sbjct: 2510 PQFSTSVYENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEA-FSVDMDSGLVTTQRP 2568
Query: 63 DQVY--------------------LIVYIQVQNVNDNVPMTLDP-----VYYAQIVENQS 97
Q Y ++ ++V +VNDN P+ + P ++ + + +S
Sbjct: 2569 LQSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIKEEIPLRS 2628
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSG 138
+ + +G L+ R S+ S GN + YF ID SG
Sbjct: 2629 NVYEVYATDKDEG-LNGAVRYSFLKSTGNRDWEYFTIDPISG 2669
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 62 PDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
PD V Y V I + N NDN P+ P+Y + EN + ++ + A+D D+ ++Y
Sbjct: 436 PDHVGYAKVKITLINENDNRPIFSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNY 495
Query: 121 KISAGNPESYFNIDIGSG 138
S +P+ F++D +G
Sbjct: 496 FFS-DDPDR-FSLDKDTG 511
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 37/167 (22%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG---- 61
+Y A++ EN+ ++ + A D D RI Y+I++GN F + ++TG
Sbjct: 1418 LYEAEVDENEDIQHTVLTVTAKDHD--ESSRIRYEITSGNIGGAFAV---KNMTGAIYVA 1472
Query: 62 --------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y V I V++VNDN P+ P Y QI E LP
Sbjct: 1473 GALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLP 1532
Query: 102 --IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNIDIGSGSL 140
++Q+ A+DGD D Q I Y ++ NP S F+I+ +G +
Sbjct: 1533 KRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTTGEI 1579
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 40/159 (25%)
Query: 5 PVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISA-----GNP-ESYFNID--- 53
P Y QI E LP ++Q+ A+DGD D Q I Y ++ NP S F+I+
Sbjct: 1517 PTYRTQITEEDDRNLPKRVLQVTATDGDKDRPQNIVYFLTGQGIDPDNPANSKFDINRTT 1576
Query: 54 --------IGSDLTGGPDQVYLIVYIQ----------------VQNVNDNVPMTLDPVYY 89
+ D G Q V+ Q ++++NDN P+ VY+
Sbjct: 1577 GEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYF 1636
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQ----RISYKISA 124
+ EN + + ++ + A D D DP++ R+ Y I
Sbjct: 1637 GNVTENGTAGMVVMTMTAVDYD-DPNEGSNARLVYSIEK 1674
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
+ GP+ V + I + + NDN P +Y A++ EN+ ++ + A D D RI
Sbjct: 1390 SNGPNSVTKFIRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDH--DESSRI 1447
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
Y+I++GN F + +G++
Sbjct: 1448 RYEITSGNIGGAFAVKNMTGAI 1469
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI------------------------ 41
YY ++ E P++++ A+D D + ++ Y I
Sbjct: 973 TYYPKVEEGAPNGSPVIKVVATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVSTNK 1032
Query: 42 ---SAGNPESYFNIDIGSDLTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQS 97
G+ + ++ + + G P + + +++ +VNDN P+ Y + ++ S
Sbjct: 1033 VFDREGDDGKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDAS 1092
Query: 98 GILPIVQLAASDGDLDPDQRISYKISA-GNPE--SYFNIDIGSGSL 140
I++++ASD D D + I Y ++A NP YF I SG +
Sbjct: 1093 IGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWI 1138
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 52 IDIGSDLTGGPDQVYL---IVYIQVQNVNDNVPMTLD-PVYYAQIVENQSGILPIVQLAA 107
+D GS G ++ +V + + +VNDN P+ D YY ++ E P++++ A
Sbjct: 934 MDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNGSPVIKVVA 993
Query: 108 SDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
+D D + ++ Y I + F +D +G +
Sbjct: 994 TDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEV 1028
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+D DL + + + + A N + F +D
Sbjct: 588 YEVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P V + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A+D D+ P+ + Y ISAG+ S F I SG
Sbjct: 708 VTTVSATDPDMGPNGTVKYSISAGD-RSRFQIHAKSG 743
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A + E + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSFSGQV 1267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y QI EN I+Q++A+D D + ++ Y I GN F ID
Sbjct: 2158 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+Q+ A D D P+ ++SY + GN ++ F + SG L
Sbjct: 2277 RAILQVVARDDDQGPNSQLSYVLLGGNEDNAF-VLTASGEL 2316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSDLTGGPDQVYLIVY-------- 70
+ + A+D D P+ I Y + +GN S ID LTG D+ + Y
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 71 -------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
+ V ++NDN P+ +Y QI EN I+Q++A+D D + +
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 2188
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
+ Y I GN F ID +G++
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAI 2211
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V ++NDN P + + ++I+EN S I+ ++A+D D P+ ++ Y+
Sbjct: 2650 PFSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSP-RKILTVSATDKDSGPNGQLDYE 2708
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN ES F I+ +G +
Sbjct: 2709 IVNGNQESSFTINHATGEI 2727
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
++ ++EN ++ L A+D D + I+Y + + + + F ID +G T G
Sbjct: 3201 FFPTVMENAPSGTTVIHLNATDADSGANAVIAYTVQSSDSD-LFVIDPNMGVITTQGFLD 3259
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY ++ E S +
Sbjct: 3260 FETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAV 3319
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD D+ D + Y I + + F I+ +G +
Sbjct: 3320 GEVFASDRDMGADGEVHYLIFGNSRKKGFQINKMTGQI 3357
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLT 59
L Y A + E + + +++++ASD D + I Y I GN E F ID S L
Sbjct: 1211 LKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLV 1270
Query: 60 GGPDQVYLIVY---------------------IQVQNVNDNVPMTLDPVYYAQIVENQSG 98
G D Y I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSI 1372
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 5 PVYYAQIVE-NQSGILP----IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL- 58
PV+ Q+ N S +P + ++A+DGD + + Y I +GN +F+I S L
Sbjct: 473 PVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLV 532
Query: 59 ----TGG---------------------PDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQI 92
GG P Y + + V +VND P+ P Y +
Sbjct: 533 TTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSV 592
Query: 93 VENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDIGSGSL 140
VEN ++ L A+D DL + + + + A N + F +D SG L
Sbjct: 593 VENAPTGTELLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
+S++ + I + +GG +V I V+++NDN P L V VEN I Q
Sbjct: 859 QSFYQLKIVA--SGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAK 916
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A D D + R+ Y + NP++ F I+ +G++
Sbjct: 917 AVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNI 949
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----- 59
Y + EN G LP I+Q+ A D D P+ ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSL 2322
Query: 60 --GGPDQVYLIVY----------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D L+V I V ++NDNVP + +Y I E+
Sbjct: 2323 DREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + ISY I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADAAANAVISYSIIGGN--SQFTINPSTGQI 2419
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 7 YYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDL 58
Y+ + +N + G I A D D + + Y +S GN F +D I S L
Sbjct: 2990 YFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSL 3049
Query: 59 TGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+Q +LI V+I V N + P A I E+ S
Sbjct: 3050 VSDLNQNFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSV 3109
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++A D D + ISY I +GN E F I+ +G
Sbjct: 3110 VRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTG 3146
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A+D D P+ ++ Y+I GN ES F I+
Sbjct: 2674 DP-FVSEILENLSP-RKILTVSATDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIR 2731
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2732 PLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPR-FSQIFSAYVSENSPLG 2790
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2791 YTVTRVTTSDEDI 2803
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A I E+ S + ++A D D + ISY I +GN E F I+ + +
Sbjct: 3098 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 3157
Query: 60 -------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
GG Y + + V +VNDN P+ + ++ ++EN ++
Sbjct: 3158 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIH 3217
Query: 105 LAASDGDLDPDQRISYKISAGNPESY 130
L A+D D + I+Y + + + + +
Sbjct: 3218 LNATDADSGANAVIAYTVQSSDSDLF 3243
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+S + ++I + G P + + V IQV++ NDN P + IVEN ++ +
Sbjct: 1383 QSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISV 1442
Query: 106 AASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
A D D D + ++SY I P ++F+ID G++
Sbjct: 1443 TAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTI 1478
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGN 126
V + V+++NDN P+ DP E+ ++ A+D D+ + SY+I +GN
Sbjct: 121 VRVLVRDLNDNAPVFPDPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHHSYRIVSGN 180
Query: 127 PESYFNIDI 135
F +DI
Sbjct: 181 EAGRFRLDI 189
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 38/170 (22%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDI------- 54
DP E+ ++ A+D D+ + SY+I +GN F +DI
Sbjct: 137 DPSIVVTFKEDSGSGRQVILDTATDSDIGSNGVDHHSYRIVSGNEAGRFRLDITLNPSGE 196
Query: 55 GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVYY 89
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 197 GAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQ 256
Query: 90 AQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 257 AGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 24/154 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--------I 54
L V VEN I Q A D D + R+ Y + NP++ F I+ +
Sbjct: 894 LQAVESINAVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQ-NPKNLFTINEQNGNISLL 952
Query: 55 GS-DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
G+ D+ G QV ++ + + V +VNDN P+ Y + E++
Sbjct: 953 GALDVHAGSYQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVN 1012
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ ASD D + I+Y I+ GN F I
Sbjct: 1013 SRFFKVQASDKDSGANGEIAYTITDGNNGDAFGI 1046
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I +Q++NDN P+ + EN I+QL A D D + ++Y + +G +
Sbjct: 1726 VEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGADD 1785
Query: 129 SYFNIDIGSGSL 140
S F ID SG L
Sbjct: 1786 S-FRIDPESGDL 1796
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + Y + +VNDN P+ Y ++EN ++ +D D + ++S
Sbjct: 1921 GGGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLS 1980
Query: 120 YKISAGNPESYFNID 134
Y I++G+ F +D
Sbjct: 1981 YSIASGDSLGQFAVD 1995
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V ++NDN P P YY E + Q++A+D D + ++ Y I + +
Sbjct: 2860 VTIFVTDINDNTPRFSRPSYYLDCPELPELGSRVTQVSATDPDEGSNGQVFYFIKSQS-- 2917
Query: 129 SYFNIDIGSGSL 140
YF I+ +G +
Sbjct: 2918 EYFRINATTGEI 2929
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I V ++ND+ P+ VY + E + ++A+DGD + + Y I +GN +
Sbjct: 463 IFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRYSIVSGNGLGW 522
Query: 131 FNIDIGSG 138
F+I SG
Sbjct: 523 FHISEHSG 530
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 30 DLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
D + ++R+S K+ A N + NI G+D+ D+V V I V + ND +L Y
Sbjct: 3364 DREKEERVSLKVLAKN---FGNIR-GADI----DEV--TVNITVLDANDPPVFSLS-TYR 3412
Query: 90 AQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSGSL 140
QI E + ++A D D P R SY I +GN F+I+ +G +
Sbjct: 3413 VQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQI 3464
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DL--TGGPDQVYLIVY------- 70
I+QL A D D + ++Y + +G +S F ID S DL T D+ + Y
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGADDS-FRIDPESGDLIATKRLDREHRSKYSLLVRAD 1817
Query: 71 -----------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
I + +VND+ P PVY I E+ + + + A+D D + IS
Sbjct: 1818 DGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGVNGEIS 1877
Query: 120 YKISAGNPESYFNIDIGSG 138
Y + + + F +++ +G
Sbjct: 1878 YVVEEDDGDGVFFLNLVTG 1896
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
VY Q+ EN ++ + A D D D + Y + AG F+I+
Sbjct: 1036 VYQGQVQENSPAGTQVMVVTAQDDDSGLDGELQYFLRAGTGLEAFSINQDTGMLETLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V ++NDN+P PV+Y + E+
Sbjct: 1096 DREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ +++GN +F + +G L
Sbjct: 1156 VLQLEAWDPDFSSQGKLTFNLTSGNHMGHFIVHPFTGLL 1194
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY + E P++QL ASD D +Q +SY+I S G
Sbjct: 2276 VYSTSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+F + + + G P +V + V ++NDN P +P Y A + E +
Sbjct: 2336 ELDYEAHQHFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D+ R+ Y I +GN + +F+I+ SG
Sbjct: 2396 HLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSG 2434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQ 64
PV+Y + E+ ++QL A D D ++++ +++GN +F + + L Q
Sbjct: 1140 PVFYPSVKEDAPLGTSVLQLEAWDPDFSSQGKLTFNLTSGNHMGHFIVHPFTGLLSTAKQ 1199
Query: 65 V-------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ Y++ V + V +VNDN PM ++ ++ E S +
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLSPLS 1259
Query: 101 --PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + I+Y I + ES F ID +G
Sbjct: 1260 PEPVYRLVASDPDEGLNGSITYSIEESDEES-FRIDPVTG 1298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 63 DQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
D V L+ V IQV++VNDN P+ Y A + EN G ++Q+ A+D D D ++SY+
Sbjct: 2778 DLVSLVSVNIQVEDVNDNRPVFEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYR 2837
Query: 122 IS---AGNPESYFNIDIGSG 138
+S N F +D SG
Sbjct: 2838 LSVEPGSNIHQLFAVDSESG 2857
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL----- 58
+P Y A + E + ++++ A D D+ R+ Y I +GN + +F+I+ S +
Sbjct: 2381 EPQYEANVSELATCGHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFN 2440
Query: 59 -------------TGGPDQVY---LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
G D V+ + VYI N N P VY A++ EN +
Sbjct: 2441 LCKKQLDSSYNLRVGASDGVFQATVPVYINTTNANKYSPEFQQNVYEAELAENAKVGTKV 2500
Query: 103 VQLAASDGDLDPDQRISYKI 122
++L A D D P + Y I
Sbjct: 2501 IELLAIDKDSGPYGTVDYTI 2520
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTGG 61
P Y ++ EN + PI+ A + R+ Y I P F D + +TG
Sbjct: 2174 PYYKVKVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 62 PD------QVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V+++NDN P VY + E P
Sbjct: 2231 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D +Q +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEM 2331
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P P Y A + + + ++Q+ A D D + + Y G
Sbjct: 1538 FVWVTIHVEDGNLHSPHFTQPRYEANVPDTTTPGTELLQVRAVDADRGANAEVHYSFLKG 1597
Query: 126 NPESYFNID 134
N E +FNID
Sbjct: 1598 NSEGFFNID 1606
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AGNPESYFNIDIGS---- 56
DP Y A + EN G ++Q+ A+D D D ++SY++S N F +D S
Sbjct: 2802 DP-YKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWIT 2860
Query: 57 ---DLTGGPDQVYL------------------IVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2861 TLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVEN 2920
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F+I
Sbjct: 2921 NEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSI 2959
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 45 NPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
NP+ + +I+ + V IV I V +VN++ P +Y +++EN I+
Sbjct: 3286 NPKYFLSIECSRKSSSSLSDVTTIV-INVTDVNEHHPRFTHDLYTVRVLENAIVGDVILT 3344
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ASD D + I+Y + GN +F ID G L
Sbjct: 3345 VSASDDDGPVNSVITYSLVGGNQLGHFTIDPKKGKL 3380
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID----------- 53
P Y A + + + ++Q+ A D D + + Y GN E +FNID
Sbjct: 1558 PRYEANVPDTTTPGTELLQVRAVDADRGANAEVHYSFLKGNSEGFFNIDSLLGIITVAQR 1617
Query: 54 ------------IGSDLTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
+ ++ G P + L +V + V + + P+ Y+ +I E+
Sbjct: 1618 LDHVHLNRHALTVKAEDQGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGS 1677
Query: 101 PIVQL-AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
PI+ + AAS D ++Y++ GN S F+++ SG
Sbjct: 1678 PILLISAASSSD------VTYELREGNKNSVFSMNSYSG 1710
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS----------------------- 56
P+ LAA+D D R+ Y I+ GN E F+I++ +
Sbjct: 733 PLAHLAATDPDPGFHGRLVYVIADGNEEGCFDIELETGLLTVAAALDYETTSFYVLNVTV 792
Query: 57 -DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
DL P + ++ + V++ ND P Y I E+ + +L D D + +
Sbjct: 793 YDLGTPPKSSWKLLTVTVKDWNDKPPRFPPGGYQLTISEDTEVGTTVAELKTRDTDSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + P F++ +G L
Sbjct: 853 GRVRYTLLT--PTEKFSLHPLTGEL 875
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 42/167 (25%)
Query: 7 YYAQIVENQSGILPIVQL-AASDGDLDPDQRISYKISAGNPESYFNID------------ 53
Y+ +I E+ PI+ + AAS D ++Y++ GN S F+++
Sbjct: 1665 YFIEIPESVPIGSPILLISAASSSD------VTYELREGNKNSVFSMNSYSGLISTQKRL 1718
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN---QSG 98
GS++ G +V +VYI + NDN P L + I E S
Sbjct: 1719 DHEKVSSYQLKIRGSNMAGVFTEVVALVYII--DENDNAPAFLKSTFVGHISEAAPLHSL 1776
Query: 99 IL-----PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
IL P+V + ASD D + + + YKI +F ID G+L
Sbjct: 1777 ILGEDNSPLV-IRASDSDQEANSLLVYKILEPEALKFFKIDPSMGTL 1822
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV--PMTLDP 86
G L ++ + ++ AG S++ D G L + V + V +VN+N+ P
Sbjct: 979 GALSLEKELDFERRAGYNLSFWASDSGRPLA---RRTLCHVEVLVMDVNENLHSPHFSSF 1035
Query: 87 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
VY Q+ EN ++ + A D D D + Y + AG F+I+ +G L
Sbjct: 1036 VYQGQVQENSPAGTQVMVVTAQDDDSGLDGELQYFLRAGTGLEAFSINQDTGML 1089
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ R ++ I+ G+P F+I +G +
Sbjct: 2913 YRGSVVENNEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSISQVGDEWRITSRK 2972
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ G Q + V + V ++NDN P +Y ++ E+ + I
Sbjct: 2973 TLDREHIAKYLLRITASDGKFQASVPVEVFVLDINDNSPQCSQLLYTGKVREDVTPGHFI 3032
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++A D D+D + +I+Y + G F +D +G L
Sbjct: 3033 LKVSAIDVDMDTNAQITYSLH-GPGAQEFKLDPHTGEL 3069
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V ++++N+NDN PM + + Q + +A S D+D Q + Y+I +GN +
Sbjct: 550 VSLRLKNLNDNQPMFEE--VNCTVSLRQDAPVGKSIMAVSAIDMDELQNLKYEIVSGNEQ 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 DYFHLNHFSG 617
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
D+ P ++D I+E P+ LAA+D D R+ Y I+ GN E F+I++ +
Sbjct: 716 DHFPQSID------ILEQVPVNTPLAHLAATDPDPGFHGRLVYVIADGNEEGCFDIELET 769
Query: 138 GSL 140
G L
Sbjct: 770 GLL 772
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISA 124
+V + V++VNDN+P YY I Q G P + Q++A+D DL + ++Y +
Sbjct: 2055 LVRVSVEDVNDNIPEFQHLPYYTVI---QDGTEPGDVLFQVSATDKDLGANGTVTYGFAE 2111
Query: 125 GNPESYFNID 134
+YF ID
Sbjct: 2112 DY--AYFRID 2119
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 51/140 (36%), Gaps = 23/140 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
VY A++ EN +++L A D D P + Y I F I+ +T
Sbjct: 2485 VYEAELAENAKVGTKVIELLAIDKDSGPYGTVDYTIINKLAGERFFINPSGQITTLQKLD 2544
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V I + + NDN P Y I N S PI
Sbjct: 2545 RENSTERVIAIKIMARDGGGKVAFCTVKIILTDENDNAPQFKASGYTVSIPSNVSRDSPI 2604
Query: 103 VQLAASDGDLDPDQRISYKI 122
+Q+ A D D + ++Y +
Sbjct: 2605 IQVLAYDADEGRNADVTYSV 2624
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 24/155 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y ++ E+ + I++++A D D+D + +I+Y + + F +D
Sbjct: 3017 LYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLHGPGAQE-FKLDPHTGELTTLSVL 3075
Query: 54 ----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+ GG V + +++VNDN P + +N + P+
Sbjct: 3076 DRERKDVYNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRFFPSHCAVAVFDNTTVKTPVA 3135
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A D D + ++ Y ++ + + F+ID SG
Sbjct: 3136 VVFARDPDQGVNAQVVYSLT-DSADGQFSIDATSG 3169
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNID------------ 53
Y +VEN ++ L A+DGDL + + + + A F +D
Sbjct: 588 YDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSL 647
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ +DL P + + + ++NDN P+ Y+A I EN+ G
Sbjct: 648 DREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSY 707
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
I ++A+D DL + + Y ISAG+ S F ++ SG
Sbjct: 708 ITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSG 743
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ ++++NDN P L Y A I E+ + + +++++ASD D + I Y I GN E
Sbjct: 1196 VHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEE 1255
Query: 129 SYFNIDIGSGSL 140
F ID SG +
Sbjct: 1256 RQFAIDSTSGQV 1267
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 28/162 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI----------- 54
+Y +I EN I+Q+ A+DGD + ++ Y I GN F ID
Sbjct: 2158 LYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPL 2217
Query: 55 -------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+D P V I + ++ND VP+ Y + EN G LP
Sbjct: 2218 DREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENL-GTLP 2276
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
I+Q+ A D D + ++SY + GN ++ F + SG LG
Sbjct: 2277 RTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLS-ASGELG 2317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+A I EN+ G I ++A+D DL + + Y ISAG+ S F ++ S +
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGD-RSRFQVNAQSGVISTRMALD 752
Query: 60 ---------------GG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GG P+Q IV I V + DN P+ Y + EN +
Sbjct: 753 REEKTAYQLQIVATDGGNLQSPNQA--IVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++AS DL+ + ISY I+ G+ + F I+ +G L
Sbjct: 811 HVGSVSASTMDLNSN--ISYLITTGDQKGMFAINQVTGQL 848
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V ++NDN P+ +Y +I EN I+Q+ A+DGD + ++ Y I GN
Sbjct: 2140 VVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTN 2199
Query: 129 SYFNIDIGSGSL 140
F ID +G++
Sbjct: 2200 QEFRIDSVTGAI 2211
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
P Y + I V +VNDN P+ + + ++I+EN S I+ ++A D D P+ ++ Y+
Sbjct: 2648 PFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSP-RKILTVSAMDKDSGPNGQLDYE 2706
Query: 122 ISAGNPESYFNIDIGSGSL 140
I GN E+ F+I+ +G +
Sbjct: 2707 IVNGNMENSFSINHATGEI 2725
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 25/154 (16%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG------------- 55
A I E+ S + ++A D D + I Y IS+GN E F I+
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 56 ---------SDLTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
S + GG Y V + V +VNDN P+ L Y+ ++EN ++
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
L A+D D + I+Y + + + + F ID +G
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTG 3248
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGG--- 61
Y+ ++EN ++ L A+D D + I+Y + + + + F ID G T G
Sbjct: 3199 YFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSD-LFVIDPNTGVITTQGFLD 3257
Query: 62 ----------------PDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD+ + V IQ++ N+ VP + +YY +I E +
Sbjct: 3258 FETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIV 3317
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ ASD DL D + Y I + + F I+ +G +
Sbjct: 3318 GEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQI 3355
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L Y A I E+ + + +++++ASD D + I Y I GN E F ID S
Sbjct: 1211 LKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLI 1270
Query: 57 ---DLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D P +I + I + + NDN P + ++EN
Sbjct: 1271 GKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRI 1330
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ + A+D D + + Y I+ N F+I +GS+
Sbjct: 1331 GELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSI 1372
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL-----TGG----------------- 61
++A+DGD + + Y I +GN +F+I S L +GG
Sbjct: 497 ISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRELASQIVLNISARD 556
Query: 62 ----PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQ 116
P Y + + + +VND P+ P Y +VEN ++ L A+DGDL +
Sbjct: 557 QGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNG 616
Query: 117 RISYKI-SAGNPESYFNIDIGSGSL 140
+ + + A F +D SG L
Sbjct: 617 TVRFSLQEAETDRRSFRLDPVSGRL 641
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 7 YYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
Y + EN G LP I+Q+ A D D + ++SY + GN ++ F + +L
Sbjct: 2264 YSVNVPENL-GTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSL 2322
Query: 59 ----------------TGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+G P + + V +VNDNVP Y+ I E+
Sbjct: 2323 DRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTD 2382
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ + ASD D + I +I GN S F I+ +G +
Sbjct: 2383 VLLVNASDADASKNAVI--RIIGGN--SQFTINPSTGQI 2417
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAG 125
V + V+++NDN P+ DP E+ S ++ A+D D+ D R SY+I G
Sbjct: 121 VRVLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRG 179
Query: 126 NPESYFNIDI 135
N F +DI
Sbjct: 180 NEAGRFRLDI 189
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 25 AASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT--------------------GGPD 63
+ S +D + ISY I+ G+ + F I+ + LT GG
Sbjct: 814 SVSASTMDLNSNISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKVVASGGTV 873
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+V I V+++NDN P L + +VEN I Q A D D + + Y +
Sbjct: 874 TGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLK 933
Query: 124 AGNPESYFNIDIGSGSL 140
NP++ F I+ +G++
Sbjct: 934 Q-NPKNLFAINEKNGTI 949
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 40/171 (23%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDP---DQRISYKISAGNPESYFNIDI------ 54
DP E+ S ++ A+D D+ D R SY+I GN F +DI
Sbjct: 137 DPSIVVTFKEDSSSGRQVILDTATDSDIGSNGVDHR-SYRIIRGNEAGRFRLDITLNPSG 195
Query: 55 -GSDL----TGGPDQV---------------------YLIVYIQVQNVNDNVPMTLDPVY 88
G+ L GG D+ YL V + VQ++NDN P+ Y
Sbjct: 196 EGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESYFNIDIGSG 138
A + E+ ++Q+AA+D D + I Y++ G P F +D +G
Sbjct: 256 QAGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETG 303
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------- 53
DP + ++I+EN S I+ ++A D D P+ ++ Y+I GN E+ F+I+
Sbjct: 2672 DP-FISEILENLSP-RKILTVSAMDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVR 2729
Query: 54 -------------IGSDLTGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
I S G P Q + V I + + NDN P ++ A + EN
Sbjct: 2730 PLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPR-FSQIFSAHVPENSPLG 2788
Query: 100 LPIVQLAASDGDL 112
+ ++ SD D+
Sbjct: 2789 YTVTRVTTSDEDI 2801
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQ 72
E QS +P + L LD ++ SY ++ ++Y G+ + L+++
Sbjct: 408 EVQSSKVPNLSLIKVASALDRERIPSYNLTVSVSDNY-GAPPGAAVQARSSVASLVIF-- 464
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
V ++ND+ P+ VY + E + ++A+DGD + + Y I +GN +F+
Sbjct: 465 VNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFH 524
Query: 133 IDIGSG 138
I SG
Sbjct: 525 ISEHSG 530
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 25/163 (15%)
Query: 3 LDPVYYAQIVEN-QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------I 54
L Y+ + +N + G I A D D + + Y IS N F +D +
Sbjct: 2984 LKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
Query: 55 GSDLTGGPDQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
S L +Q + I V+I V N + P A I E+ S
Sbjct: 3044 ASSLISDLNQNFFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHS 3103
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++A D D + I Y IS+GN E F I+ +G L
Sbjct: 3104 IGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGIL 3146
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
T P V I +Q++NDN P+ + + EN I+QL A D D + +
Sbjct: 1716 TAFPRTQRAEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALV 1775
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
+Y I +G +S F ID SG L
Sbjct: 1776 TYTIISGADDS-FRIDPESGDL 1796
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 30 DLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYY 89
D + ++R+S K+ A N S DI D+V V + V + ND TL+ +Y
Sbjct: 3362 DREKEERVSLKVLAKNFGSIRGADI--------DEV--TVNVTVLDANDPPIFTLN-IYS 3410
Query: 90 AQIVENQSGILPIVQLAASDGDLDPD-QRISYKISAGNPESYFNIDIGSGSL 140
QI E + ++A D D P R SY I +GN F+I+ +G +
Sbjct: 3411 VQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQI 3462
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 47 ESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+S + ++I + G P + + V I V++ NDN P + IVEN ++ +
Sbjct: 1383 QSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISV 1442
Query: 106 AASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
A D D D + ++SY I P ++F ID G++
Sbjct: 1443 TAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTI 1478
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 24/154 (15%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS------ 56
L + +VEN I Q A D D + + Y + NP++ F I+ +
Sbjct: 894 LQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQ-NPKNLFAINEKNGTISLL 952
Query: 57 ---DLTGGPDQVYL--------------IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D+ G Q+ + I+ + V +VNDN P+ Y + E++
Sbjct: 953 GPLDVHAGSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVN 1012
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
++ ASD D + I+Y I+ GN F I
Sbjct: 1013 SRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGI 1046
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG + VY + +VNDN P+ Y ++EN ++ +D D + +++
Sbjct: 1921 GGGQFTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLT 1980
Query: 120 YKISAGNPESYFNID 134
Y I++G+ F +D
Sbjct: 1981 YSIASGDSLGQFTVD 1995
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------IGS 56
VY + E+ +V L +D D+ + +SY I+ GN + F++ +G
Sbjct: 999 VYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGL 1058
Query: 57 DL-----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
D G V++ V +VNDN P+ L Y A + E+
Sbjct: 1059 DRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEG 1118
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I+QL A+D D R+ Y+I GN + F I + +G L
Sbjct: 1119 HSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLL 1159
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRIS 119
GG ++ V I V +VNDNVP Y + EN+ + +V+L A+D D P+ +I+
Sbjct: 538 GGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQIT 597
Query: 120 YKI-SAGNPESYFNIDIGSG 138
Y I SA SYF+I + G
Sbjct: 598 YSIVSASAFGSYFDISLYEG 617
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLTGGP--- 62
Y + EN G +VQ+ A+D D+ + +SY I+ GN + F +D I ++ P
Sbjct: 1533 YNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMAFRMDRISGEIATRPAPP 1592
Query: 63 ----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-L 100
Y + VY+ + + NDN PM P Y + E +
Sbjct: 1593 DRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNT 1652
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A D D P+ ++Y I AGN + F ID G
Sbjct: 1653 SLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMG 1690
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---------------------- 47
++ E Q G + A D D P+ ++ Y I G+P
Sbjct: 1753 EVTEGQPGPR-VWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDR 1811
Query: 48 ---SYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
+++N+ I + G P ++V I+V ++NDN P+ L+ I EN +
Sbjct: 1812 ETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVA 1871
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ASD D + R+++ I+AGN E F I+ +G
Sbjct: 1872 HVLASDADSGCNARLTFNITAGNRERAFFINATTG 1906
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV-YYAQIVENQSGILPIVQLAASDGDL 112
+ SD P + I+ + + ++NDN P+ P Y + EN G +VQ+ A+D D+
Sbjct: 1498 VASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDI 1557
Query: 113 DPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ +SY I+ GN + F +D SG +
Sbjct: 1558 GINSVLSYYITEGNKDMAFRMDRISGEIA 1586
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI-SAGNPESYFNIDI----------- 54
Y + EN+ + +V+L A+D D P+ +I+Y I SA SYF+I +
Sbjct: 566 YVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSR 625
Query: 55 -----------------GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D P + V I+V + NDN P P Y+ +VEN
Sbjct: 626 PLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIM 685
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ L A+D D + I + + F I+ SG +
Sbjct: 686 AGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEI 728
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VND P P + + EN+ ++ + A+D D P+ ++Y + E
Sbjct: 2495 VVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVE 2554
Query: 129 SYFNIDIGSG 138
+ F++D+ SG
Sbjct: 2555 A-FHVDMDSG 2563
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 24/151 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------- 53
+ A+++E + I Q+ A D D + +SY++ G P F I+
Sbjct: 895 FVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 954
Query: 54 -----------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
+ SD + I V +VND P VY + E+ +
Sbjct: 955 RERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRV 1014
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNI 133
V L +D D+ + +SY I+ GN + F++
Sbjct: 1015 VWLNCTDNDVGLNAELSYFITGGNVDGKFSV 1045
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 37/166 (22%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAG------------------------N 45
++EN ++Q+ A+D D + + Y+I AG
Sbjct: 2077 HLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREE 2136
Query: 46 PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
ESY + +D P IV I + ++ND+ P L+P+ ++E+ I +
Sbjct: 2137 QESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAEPGTVIANI 2196
Query: 106 AASDGDLDPDQRISYKISA-----------GNPESYFNIDIGSGSL 140
A D DL+P ++ Y I N E F ++I +GS+
Sbjct: 2197 TAIDHDLNP--KLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG-------------------- 60
I+QL A+D D R+ Y+I GN + F I + + L
Sbjct: 1121 ILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVLIVEA 1180
Query: 61 -----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI-LPIVQLAASDGDLDP 114
GP + + V + V+++ND P+ Y + +GI ++ + A+D D
Sbjct: 1181 YNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSGD 1240
Query: 115 DQRISYKISAGNPESYFNIDIGSG 138
++Y+I +G E F ID +G
Sbjct: 1241 GGLVNYRILSG-AEGKFEIDESTG 1263
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---------DLTGGPD-------- 63
+ + ASD D + R+++ I+AGN E F I+ + D P+
Sbjct: 1870 VAHVLASDADSGCNARLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYKLTISVK 1929
Query: 64 ----------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ Y ++ I + + NDN P+ Y A+++EN P+ L LD
Sbjct: 1930 DNPENPRIARRDYDLLLIFLSDENDNHPLFTKSTYQAEVMENSPAGTPLTVLNGPILALD 1989
Query: 114 PDQRI----SYKISAGNPESYFNIDIGSG 138
DQ I +Y++ G F+I+ +G
Sbjct: 1990 ADQDIYAVVTYQL-LGAQSGLFDINSSTG 2017
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V IQV +VNDN P + Y +I EN PI + A+D DL + Y P
Sbjct: 118 VNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP--PS 175
Query: 129 SYFNIDIGSG 138
+F ID G
Sbjct: 176 QFFAIDSARG 185
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 49 YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
+ N + + G P + I VY+++ ++NDN P+ P Y + E+ I+ + A
Sbjct: 2367 WLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDVPVGTIILTVTA 2426
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+D D I Y S G+ ES F I+ +G +
Sbjct: 2427 TDADSGNFALIEY--SLGDGESKFAINPTTGDI 2457
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP 62
P + + EN+ ++ + A+D D P+ ++Y + E+ F++D+ S L T P
Sbjct: 2512 PQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEA-FHVDMDSGLVTTQRP 2570
Query: 63 DQVY--------------------LIVYIQVQNVNDNVPMTLDP-----VYYAQIVENQS 97
Q Y ++ ++V +VNDN P+ + P ++ + + +S
Sbjct: 2571 LQSYEKFSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIREEIPLRS 2630
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSG 138
+ + +G L+ R S+ +AGN + +F ID SG
Sbjct: 2631 NVYEVYATDKDEG-LNGAVRYSFLKTAGNRDWEFFIIDPISG 2671
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V++ + ++NDN P + + A+++E + I Q+ A D D + +SY++ G P
Sbjct: 876 VFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPR 935
Query: 129 SYFNIDIGSG 138
F I+ SG
Sbjct: 936 MDFLINSSSG 945
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 62 PDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
PD V Y V I + N NDN P+ P+Y + EN + ++ + A+D D +SY
Sbjct: 438 PDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSY 497
Query: 121 KISAGNPESYFNIDIGSG 138
S +P+ F++D +G
Sbjct: 498 FFS-DDPDR-FSLDKDTG 513
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 34/151 (22%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------IGSDLTGG-------- 61
++ + A D D P+ ++Y I AGN + F ID + +++ G
Sbjct: 1654 LITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMGVITAAKELDYEISHGRYTLIVTA 1713
Query: 62 PDQVYLI---------VYIQVQNVNDNVPMTLDPVYYA---QIVENQSGILPIVQLAASD 109
DQ ++ V + V ++NDNVP P Y ++ E Q G + A D
Sbjct: 1714 TDQCPILSHRLTSTTTVLVNVNDINDNVPTF--PRDYEGPFEVTEGQPGPR-VWTFLAHD 1770
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D P+ ++ Y I G+P F I G L
Sbjct: 1771 RDSGPNGQVEYSIMDGDPLGEFVISPVEGVL 1801
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI---------------SAG------ 44
VY I E P++QL ASD D ++ +SY+I S G
Sbjct: 2276 VYTTSISEGLPAQTPVIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQ 2335
Query: 45 ----NPESYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
+ +F++ + + G P +V + V ++NDN P P Y A + E +
Sbjct: 2336 ELDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCG 2395
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++++ A D D R+ Y I +GN + +F I+ SG
Sbjct: 2396 HLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSG 2434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+
Sbjct: 1036 VHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPL 1095
Query: 54 ------------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ D P VYI+V + NDN P V+Y I E+
Sbjct: 1096 DREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQEDAPVGTS 1155
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++QL A D D ++++ I++GN +F I +G L
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLL 1194
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 31 LDPDQRISYKISAGNPES--YFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLDPV 87
LDPD + + ES + ID+ + D V L+ V IQV +VNDN P+
Sbjct: 2742 LDPDTGVIKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADP 2801
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGSG 138
Y A + EN ++Q+ A D D D ++SY++SA N F ID SG
Sbjct: 2802 YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESG 2855
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 28/161 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-------- 56
P Y ++ EN + PI+ A + R+ Y I P F D +
Sbjct: 2174 PYYKVRVPENITLYTPILHTQARSPE---GLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230
Query: 57 -DLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
D V+ + V + V++VNDN P VY I E P
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Query: 102 IVQLAASDGDLDPDQRISYKI--SAGNPESYFNIDIGSGSL 140
++QL ASD D ++ +SY+I + +F I+ +G +
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEM 2331
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 26/145 (17%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--------------------- 58
P+ +LAA+D D + ++ Y I+ GN E F+I++ + L
Sbjct: 733 PLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 59 --TGGPDQ-VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
G P + + ++ + V++ NDN P Y I E+ I +L D D + +
Sbjct: 793 YDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELTTKDADSEDN 852
Query: 116 QRISYKISAGNPESYFNIDIGSGSL 140
R+ Y + + P F++ +G L
Sbjct: 853 GRVRYTLLS--PTEKFSLHPLTGEL 875
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQV 65
V+Y I E+ ++QL A D D ++++ I++GN +F I + L Q+
Sbjct: 1141 VFYPSIQEDAPVGTSVLQLDAWDPDSSSKGKLTFNITSGNYMGFFMIHPVTGLLSTAQQL 1200
Query: 66 -------YLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL- 100
+++ V + + +VNDN P+ ++ ++ E S +
Sbjct: 1201 DRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSP 1260
Query: 101 -PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
P+ +L ASD D + R++Y I + E+ F+ID+ +G
Sbjct: 1261 GPVYRLVASDLDEGLNGRVTYSIEDSDEEA-FSIDLVTG 1298
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 30/159 (18%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA---GNPESYFNIDIGS---- 56
DP Y A + EN ++Q+ A D D D ++SY++SA N F ID S
Sbjct: 2800 DP-YKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWIT 2858
Query: 57 ---DLTGGPDQVY------------------LIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
+L Q Y +V + + + NDN P Y +VEN
Sbjct: 2859 TLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVVEN 2918
Query: 96 QSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNI 133
+ L D D+ R ++ I+ G+P F I
Sbjct: 2919 SEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGI 2957
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL------ 58
P Y A + E + ++++ A D D R+ Y I +GN + +F I+ S +
Sbjct: 2382 PQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSGIISMFNL 2441
Query: 59 ------------TGGPDQVYLI---VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
G D V+ VYI N N P +Y A++ EN ++
Sbjct: 2442 CKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHLYEAELAENAMVGTKVI 2501
Query: 104 QLAASDGDLDPDQRISYKISAGNPESYFNID 134
L A D D P I Y I F+I+
Sbjct: 2502 DLLAIDKDSGPYGTIDYTIINKLASEKFSIN 2532
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 31/161 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQR-ISYKISAGNPESYFNID-IGSDL------ 58
Y +VEN + L D D+ R ++ I+ G+P F I +G +
Sbjct: 2911 YRGSVVENSEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFGISQVGDEWRISSRK 2970
Query: 59 ----------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP- 101
+ G Q + V I V +VNDN P +Y ++ E+ + P
Sbjct: 2971 TLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLLYTGKVHED---VFPG 3027
Query: 102 --IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I++++A+D D D + +I+Y + G F +D +G L
Sbjct: 3028 HFILKVSATDLDTDTNAQITYSLH-GPGAHEFKLDPHTGEL 3067
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+++Q++N+NDN PM + I ++ I+ ++A D +D Q + Y+I +GN
Sbjct: 550 IFLQLRNLNDNQPMFEEVNCTGSIRQDWPVGKSIMTMSAID--VDELQNLKYEIVSGNEL 607
Query: 129 SYFNIDIGSG 138
YF+++ SG
Sbjct: 608 EYFDLNHFSG 617
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ---SGIL-----PIVQLA 106
GS++ G V +V + + + NDN PM L + QI E S I+ P V +
Sbjct: 1732 GSNMAGAFTDV--MVVVDIIDENDNAPMFLKSTFVGQISEAAPLYSMIMDKNNNPFV-IH 1788
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D + + + YKI +F ID G+L
Sbjct: 1789 ASDSDKEANSLLVYKILEPEALKFFKIDPSMGTL 1822
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESY----------------------FNIDIGSDL 58
I++++A+D D D + +I+Y + + FN+ +
Sbjct: 3030 ILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGELTTLTALDRERKDVFNL-VAKAT 3088
Query: 59 TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI 118
GG + + V++VNDN P + +N + P+ + A D D + ++
Sbjct: 3089 DGGGRSCQADITLHVEDVNDNAPRFFPSHCAVAVFDNTTVKTPVAVVFARDPDQGANAQV 3148
Query: 119 SYKISAGNPESYFNIDIGSG 138
Y + + E +F+ID +G
Sbjct: 3149 VYSL-PDSAEGHFSIDATTG 3167
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 137
D+ P ++D ++E+ P+ +LAA+D D + ++ Y I+ GN E F+I++ +
Sbjct: 716 DHFPQSID------VLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELET 769
Query: 138 GSL 140
G L
Sbjct: 770 GLL 772
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
++ V I V++ N + P Y A + + + ++Q+ A D D + + Y + G
Sbjct: 1538 FVWVTIHVEDGNLHPPRFTQLHYEASVPDTIAPGTELLQVRAMDADRGVNAEVHYSLLKG 1597
Query: 126 NPESYFNID 134
N E +FNI+
Sbjct: 1598 NSEGFFNIN 1606
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQLAASDGDLDPDQRISYKISA 124
+V + +++VNDN P YY I Q G P + Q++A+D DL + ++Y+ +
Sbjct: 2055 LVRVSIEDVNDNPPKFKHLPYYTII---QDGTEPGDVLFQVSATDEDLGTNGAVTYEFAE 2111
Query: 125 GNPESYFNID 134
+YF ID
Sbjct: 2112 DY--TYFRID 2119
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQV--QNVNDNV--PMTL 84
G L ++ + ++ AG +N+ + + G P + +++V +VN+N+ P
Sbjct: 979 GALILERELDFERRAG-----YNLSLWASDGGRPLARRTLCHVEVIVLDVNENLHPPHFA 1033
Query: 85 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
V+ Q+ EN ++ +AA D D D + Y + AG + F+I+ +G
Sbjct: 1034 SFVHQGQVQENSPSGTQVIVVAAQDDDSGLDGELQYFLRAGTGLAAFSINQDTG 1087
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 32/141 (22%)
Query: 6 VYYAQIVENQSGILPI------VQLAASDGDLDPDQRISYKIS-----AGNPESYFNIDI 54
+ Y+ I NQ G I +Q+A + LD +Q SY + +G P + + DI
Sbjct: 3356 ITYSLIGGNQLGHFTIHPKKGELQVAKA---LDREQASSYSLKLRATDSGQPPLHEDTDI 3412
Query: 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 114
IQV +VNDN P Y + EN ++QL SD D P
Sbjct: 3413 A---------------IQVADVNDNPPRFFQLNYSTTVQENSPIGSKVLQLILSDPD-SP 3456
Query: 115 DQR--ISYKISAGNPESYFNI 133
+ S++I+ GN S F +
Sbjct: 3457 ENGPPYSFRITKGNNGSAFRV 3477
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
++Q+ A D D + + Y + GN E +FNI+ + ++
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSEGFFNINALLGIITLAQKLDQANHAPHTLTVKAE 1633
Query: 58 LTGGPDQVYL-IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P L V I V + + P+ Y+ +I E+ PI+ ++A + P +
Sbjct: 1634 DQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA----MSPSE 1689
Query: 117 RISYKISAGNPESYFNIDIGSG 138
++Y++ GN + F+++ SG
Sbjct: 1690 -VTYELREGNKDGVFSMNSYSG 1710
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 26/146 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------ 59
+Y A++ EN ++ L A D D P I Y I F+I+ +
Sbjct: 2485 LYEAELAENAMVGTKVIDLLAIDKDSGPYGTIDYTIINKLASEKFSINPNGQIATLQKLD 2544
Query: 60 -----------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
GG + V I + + NDN P Y I N S P+
Sbjct: 2545 RENSTERVIAIKVMARDGGGRVAFCTVKIILTDENDNPPQFKASEYTVSIQSNVSKDSPV 2604
Query: 103 VQLAASDGDLDPDQRISYKISAGNPE 128
+Q+ A D D + ++Y + NPE
Sbjct: 2605 IQVLAYDADEGQNADVTYSV---NPE 2627
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 30/143 (20%)
Query: 24 LAASDGDLDPDQRISYKISAGNPESYFNID--IGS-------DLTGGPDQVYLI------ 68
+ ASD D + + + YKI +F ID +G+ D P + +
Sbjct: 1787 IHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQG 1846
Query: 69 -----------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
V I V++VND+ P + +Y IV + ++ + AS D D
Sbjct: 1847 SPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEVAIVGPIHPGMELLMVRAS----DEDSE 1902
Query: 118 ISYKISAGNPESYFNIDIGSGSL 140
++Y I GN + I +GS+
Sbjct: 1903 VNYSIKTGNADEAVTIHPVTGSI 1925
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 35 QRISYKISAGNPESYFNIDIGS---------DLTGGPDQVYLI---------------VY 70
++ Y++ +GN + F +D + D P I V
Sbjct: 3249 EKTGYRVVSGNEQGRFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSSLSDVTTVM 3308
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + +VN++ P Y +++EN I+ ++A+D D + I+Y + GN +
Sbjct: 3309 VNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGGNQLGH 3368
Query: 131 FNIDIGSGSL 140
F I G L
Sbjct: 3369 FTIHPKKGEL 3378
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
I +++VNDN P + ++ E+ + L ASD DL P + Y + G
Sbjct: 913 ITLEDVNDNSPQCITEHNRLKVPEDLPPGTVLTFLDASDPDLGPAGEVRYVLMDG-AHGT 971
Query: 131 FNIDIGSGSL 140
F +D+ +G+L
Sbjct: 972 FRVDLMTGAL 981
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 58 LTGG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPD 115
L GG P + ++ V I +Q+VNDN P+ Y+A + EN + ++Q+ ASD D D +
Sbjct: 206 LDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADEN 265
Query: 116 QRISYKISA--GNPESYFNIDIGSGSL 140
+ Y I+ + E F ID +G++
Sbjct: 266 GLVEYAINRRQSDKEQMFRIDPRTGAI 292
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G+LD ++R SY+ + +D GG +I +Q+ +VNDN P+ Y
Sbjct: 620 GELDFERRSSYEFPV----------LATD-RGGLSTTAMI-KMQLTDVNDNRPVFYPREY 667
Query: 89 YAQIVEN-----QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ E+ Q+ PIV + A+D D ++SY+I AGN F ID +G +
Sbjct: 668 KVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 724
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 50 FNIDIGSDLTGGPD--QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAA 107
FN+ IG+ G P+ + L +++ VQ ++N P L VY A I+EN ++Q+ A
Sbjct: 1631 FNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTA 1690
Query: 108 SDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ +SY+I AG F++D G
Sbjct: 1691 KSLHGAENANLSYEIPAGVANDLFHVDWQRG 1721
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 14 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID--IGSDLTGGPDQVYLIVY- 70
+Q+ PIV + A+D D ++SY+I AGN F ID G PD + +
Sbjct: 679 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQP 738
Query: 71 IQVQNVN----DNVPMTLDPVYYAQIVENQSGILPIVQLA-------------------- 106
+ + N++ N+ D V + I++ PI + A
Sbjct: 739 MHMLNISATDGGNLRSNADAVVFLSIIDAMQRP-PIFEKARYNYYVKEDIPRGTVVGSVI 797
Query: 107 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+ GD+ + Y I +G+P+ YF+I+ SG++
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNI 831
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD-Q 64
V Y+ + E+ G+ I A G L Q + Y+ S + + I +D G P
Sbjct: 913 VTYSLVKESGKGLFAI---DARSGHLILSQHLDYESS----QRHTLIVTATD-GGVPSLS 964
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
L + + VQ+VNDN P+ Y + E++S I+Q+ ASD D + RI+Y+I
Sbjct: 965 TNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1022
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPM-TLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAG 125
V I + + NDN P+ Y A+I E I QL A D D + P+ + Y I++G
Sbjct: 2685 VIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSG 2744
Query: 126 NPESYFNIDIGSGSL 140
N E F ID+ +G L
Sbjct: 2745 NDEHMFTIDLVTGVL 2759
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS-DLTGGP----------------- 62
I + ASD D P+ + Y I+ GN + F+ID S +L+ P
Sbjct: 1813 IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASD 1872
Query: 63 ------DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
Q + + I V++ NDN P Y + E+ +VQ++A D DL +
Sbjct: 1873 RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNA 1932
Query: 117 RISYKISAGNPESYFNIDIGSG 138
R+ Y + A + F ID SG
Sbjct: 1933 RLVYSL-ANETQWQFAIDGQSG 1953
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 26 ASDGDLDPDQRISYKISAGNPESYFNIDIGS---------------------DLTGGPDQ 64
A+ GD+ + Y I +G+P+ YF+I+ S T G
Sbjct: 798 AASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPP 857
Query: 65 VY--LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
VY V I+V++VNDN P + + E+ P+ A D D +++Y +
Sbjct: 858 VYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSL 917
Query: 123 SAGNPESYFNIDIGSGSL 140
+ + F ID SG L
Sbjct: 918 VKESGKGLFAIDARSGHL 935
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+YI V +VNDN P Y V S I + ASD D P+ + Y I+ GN
Sbjct: 1780 IYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLG 1839
Query: 129 SYFNIDIGSGSL 140
+ F+ID SG L
Sbjct: 1840 NKFSIDSSSGEL 1851
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP----IVQLAASD 109
+ SD+ G + + V +++++ ++ P + Y + V + LP + Q+ A+D
Sbjct: 2889 LASDMGG--KKASVAVRVEIESRDEFTPQFTERTY--RFVLPAAVALPQGYVVGQVTATD 2944
Query: 110 GDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
D PD R+ Y++SA P S+F ++ SG++
Sbjct: 2945 SDSGPDGRVVYQLSA--PHSHFKVNRSSGAV 2973
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGSDLT--- 59
+Y+A ++E ++Q+ A D D + ++Y + A PE+ +F ID + L
Sbjct: 455 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL-AETPETHAQWFQIDPQTGLITTR 513
Query: 60 -------------------GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
GG P V + + +VNDN P+ Y + EN+
Sbjct: 514 SHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPV 573
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
I++++ASD D + ++Y I G + F + SG +
Sbjct: 574 GRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEI 616
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 32/164 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGNPESYFNIDIGS-------- 56
Y A+I E I QL A D D + P+ + Y I++GN E F ID+ +
Sbjct: 2705 YEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNR 2764
Query: 57 -DLTGGPDQVYLIV-----------------YIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
D G LI+ +++ + NDN P Y + EN+
Sbjct: 2765 LDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPV 2824
Query: 99 ILPIVQLAASDGDLDPDQRISYKI----SAGNPESYFNIDIGSG 138
+ + ASD D P +++Y I S + F +D SG
Sbjct: 2825 GSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESG 2868
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ +D P +++++ +VNDN P +Y+A ++E ++Q+ A D D
Sbjct: 422 VATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEG 481
Query: 114 PDQRISYKISAGNPES---YFNIDIGSG 138
+ ++Y + A PE+ +F ID +G
Sbjct: 482 LNSALTYSL-AETPETHAQWFQIDPQTG 508
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
Y + I++++ NDN P + A + E + + Q+ A D D + R+ Y I G
Sbjct: 2252 YAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDG 2311
Query: 126 NPESYFNID 134
N ++ F I+
Sbjct: 2312 NHDNAFVIE 2320
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 69 VYIQVQNVNDNVPMTLDPVY-YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
V I V +VNDN P DP + E Q +V++ A D D + I+Y I G
Sbjct: 1189 VRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRD 1248
Query: 128 ---ESYFNIDIGSG 138
F+ID SG
Sbjct: 1249 SDGHGLFSIDPTSG 1262
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 23 QLAASDGDLDPDQRISYKISAGNPESYFNIDIGS 56
Q+ A+D D PD R+ Y++SA P S+F ++ S
Sbjct: 2939 QVTATDSDSGPDGRVVYQLSA--PHSHFKVNRSS 2970
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 26/101 (25%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA--GNPESYFNID----------- 53
Y+A + EN + ++Q+ ASD D D + + Y I+ + E F ID
Sbjct: 238 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 297
Query: 54 -------------IGSDLTGGPDQVYLIVYIQVQNVNDNVP 81
+ D P + V I+V +VNDN P
Sbjct: 298 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 338
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V++ NDN P + + EN + L A D DL+P Y I +GN
Sbjct: 107 VLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVN 166
Query: 129 SYFNI 133
F +
Sbjct: 167 DAFRL 171
>sp|P34616|CADH3_CAEEL Cadherin-3 OS=Caenorhabditis elegans GN=cdh-3 PE=2 SV=1
Length = 3343
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+++ ++ E+ P++QL+ASD D + R +++ G F +D
Sbjct: 2149 IFHVEVPEDVRIGEPVIQLSASDADEHSNHR--FELDGGGEGIPFRVDENTGMVFVNDSL 2206
Query: 54 ---------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
I LT G + +++ V++VNDN P+ P Y EN + I Q
Sbjct: 2207 DFEKKQSYRIKVKLTDGAWLIETSLFVNVKDVNDNAPIFEKPEYLFISEENSA---EIGQ 2263
Query: 105 LAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
ASD D + + +I Y +++ YF I+ +G L
Sbjct: 2264 FHASDMDSENNGKIRYSVTS----PYFKIEPSTGVL 2295
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD-PDQRISYKISAGNPES 129
I +++VNDNVP Y A I + + IVQ A+D D+D +Q++ Y + N
Sbjct: 726 IFIEDVNDNVPKFGSRYYTATISGKSNETVAIVQ--ANDNDVDVKNQKLQYHLL--NYHD 781
Query: 130 YFNIDIGSGSL 140
+F +D +G +
Sbjct: 782 FFQLDKETGKV 792
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ I V ++NDN P Y+ +I EN I+++ A+D D D + + Y + + +
Sbjct: 1742 ILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKDKDAE--LQYSLESNDEI 1799
Query: 129 SY-FNIDIGSG 138
+ F I++ +G
Sbjct: 1800 TIPFRINVATG 1810
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 495
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 496 LKPREILSYVSVSAQSG 512
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 45
Y + EN I Q++ASD DL P+ ++SY I A +
Sbjct: 457 YMVHVAENNPPGASIAQISASDPDLGPNGQVSYSIVASD 495
>sp|O60245|PCDH7_HUMAN Protocadherin-7 OS=Homo sapiens GN=PCDH7 PE=1 SV=2
Length = 1069
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 29 GDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVY 88
G LD +QR SY+++ + G D P I+ + + +VNDN P VY
Sbjct: 264 GALDREQRDSYELT-------LRVRDGGD---PPRSSQAILRVLITDVNDNSPRFEKSVY 313
Query: 89 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSL 140
A + EN + PI+QL A+D D+ + +I Y A +D SG L
Sbjct: 314 EADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL 367
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS 123
+ Y V + +Q+ NDN P +Y A + E+Q ++Q+ A+D D + I Y I
Sbjct: 1768 RAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSIL 1827
Query: 124 AGNPESYFNIDIGSG 138
+GN E F ID SG
Sbjct: 1828 SGNQEEAFQIDALSG 1842
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS--------- 56
+Y A + E+Q ++Q+ A+D D + I Y I +GN E F ID S
Sbjct: 1791 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1850
Query: 57 --DLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+LT + ++ +QV ++NDN P L P +I E+ +
Sbjct: 1851 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFL-PSEAVEITEDSLPGVI 1909
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ ++ D DL+ S+ NP + F ID +G
Sbjct: 1910 VTHVSVHDVDLNSAFIFSFA-KESNPGTKFAIDQNTG 1945
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 113
+ SD P ++ IQV +VNDN P Y+ + E+ I ++A+D D
Sbjct: 2181 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTG 2240
Query: 114 PDQRISYKISAGNPESYFNIDIGSGSL 140
I Y I +GN + +F ++ +G L
Sbjct: 2241 SHAEIIYNIISGNEKGHFYLEENTGVL 2267
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV----YYAQIVENQSGILPIVQLAASDGD 111
+D P + VY+ V ++NDN P + + +++E Q + + + A D D
Sbjct: 812 TDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPD 871
Query: 112 LDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++Y +S+ + +F ID +G +
Sbjct: 872 EGNNAEVTYSVSSEDSSDHFKIDANNGEI 900
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 25/160 (15%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGSDLT---- 59
+Y A + ENQ+ + ++ A D D + ++ ++I G F I D G +T
Sbjct: 1273 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 1332
Query: 60 -----------------GGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
G P + V++ ND+ P + Y +++ENQ +
Sbjct: 1333 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEV- 1391
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+ + ASD D ++ + Y I GN + F I+ SG L
Sbjct: 1392 VYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELS 1431
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL--TGGP------DQVYLIVY-- 70
+ + A D D + +++Y I +GN F +D S L T P Q L V
Sbjct: 1183 VHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1242
Query: 71 --------------IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
+ V +VND P+ +Y A + ENQ+ + ++ A D D +
Sbjct: 1243 DDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPGEFVTRVEALDRDSGVNS 1302
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++ ++I G F I+ +G +
Sbjct: 1303 KLQFEIMPGASFELFEINSDTGEV 1326
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIV--ENQSGILPIVQLAASDGDLDPDQRISYKISAG 125
V + +++VNDN P+ +P Y + E Q G I+ + A+D D ++Y++ G
Sbjct: 162 FVRVDLEDVNDNHPV-FNPSTYVTSISDETQPGT-EIINVLATDQDSGIYGTVAYELIPG 219
Query: 126 NPESYFNIDIGSG 138
N S F ID +G
Sbjct: 220 NVSSLFTIDSTTG 232
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
++V +VNDN P+ Y + E+ ++ L+A+ DL+ ++ ISY+I + + E
Sbjct: 1980 VRVLDVNDNPPVFSQDFYQVTVPESIPVGYSVLTLSAT--DLESNENISYRILSSSKE-- 2035
Query: 131 FNIDIGSGSL 140
F+ID +G++
Sbjct: 2036 FSIDPKNGTI 2045
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 66 YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP--IVQLAASDGDLDPDQRISY--- 120
Y V I V++VNDN P+ Y QI E LP I+Q+ A+DGD+D I Y
Sbjct: 232 YTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTATDGDVDRPINIVYFLT 291
Query: 121 --KISAGNP-ESYFNIDIGSGSL 140
I NP S F+I+ +G +
Sbjct: 292 GQGIDPDNPANSKFDINRTTGDI 314
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD DQ G P+ F + D G Y + + ++++NDN P +Y+
Sbjct: 377 LDRDQ------PNGRPQWRFTV-FAQDEGGEGLVGYADIQVNLKDINDNAPQFPQGIYFG 429
Query: 91 QIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ EN + ++ ++A D D DP++ + K+
Sbjct: 430 NVTENGTAGSSVMTMSAVDYD-DPNESTNAKL 460
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 53 DIGSDLTGGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASD 109
D G D GG D+ Y V ++++++NDNVP I E+ + Q A+D
Sbjct: 622 DKGDDGPGGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYEDTKVGTILEQFKATD 681
Query: 110 GDLDPDQRISYKI 122
D +++YKI
Sbjct: 682 ADQGGHSKVAYKI 694
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126
+IV + + +VNDN P+ Y + EN I Q++ASD DL P ++SY I A +
Sbjct: 436 IIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASD 495
Query: 127 PE-----SYFNIDIGSG 138
+ SY ++ SG
Sbjct: 496 LKPREILSYVSVSAQSG 512
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 45
Y + EN I Q++ASD DL P ++SY I A +
Sbjct: 457 YMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASD 495
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 25/159 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------IGSDLT 59
Y+ I E S I + D D + + Y ++ GN FN+D +G L
Sbjct: 1283 YHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLD 1342
Query: 60 GGPDQVYLIVYIQ------------------VQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+++ ++ + V + NDN P ++E
Sbjct: 1343 RESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTE 1402
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++ ASD D + ++ + ISAGN F+ID +GSL
Sbjct: 1403 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSL 1441
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 4 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGS---DLTG 60
D VY I EN + Q+ A D DL + ++SY + + F+++ + LT
Sbjct: 1924 DTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTA 1983
Query: 61 GPD----QVYLI-----------------VYIQVQNVNDNVPMTLDPV-YYAQIVENQSG 98
D Q Y++ VY V ++NDN P+ DP+ Y +++ EN
Sbjct: 1984 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPI-FDPMSYSSEVFENVPI 2042
Query: 99 ILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+V ++A D D + I Y I+AG+ +S F ID
Sbjct: 2043 ATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGID 2078
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 24 LAASDGDLDPDQRISYKISAGNPES----------------------YFNIDIGSDLTGG 61
LAA+D DL + RISY+I GN E Y+ + + G
Sbjct: 1071 LAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQ 1130
Query: 62 PDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P + ++ V I V + NDN P + + I EN + +L A D D+ + +S+
Sbjct: 1131 PSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSF 1190
Query: 121 KISAGNPESYFNIDIGSG 138
+S+ + F ID +G
Sbjct: 1191 TLSSQTQD--FTIDTRNG 1206
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 48 SYFNIDIGSDLTGGPDQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 106
S +N+ IG+ TG P Q V+I++++VNDN P I EN+ I+ L
Sbjct: 3615 STYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLI 3674
Query: 107 ASDGDLDPDQR-ISYKISAGNPESYFNIDIGSG 138
ASD DL + +Y++ G +S+ ++D SG
Sbjct: 3675 ASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSG 3707
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNID-----------------------IGSD 57
+++ ASD D + ++ + ISAGN F+ID I +
Sbjct: 1403 LMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITAS 1462
Query: 58 LTGGPDQVYLIVY-IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G P ++Y + V + NDN P+ QI E PIV + A D D +
Sbjct: 1463 DCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGIPLKTPIVTVTADDPDSGLNG 1522
Query: 117 RISYKISAGNPE----SYFNIDIGSG 138
++SY IS P+ +F I+ +G
Sbjct: 1523 KVSYAISKQEPQLPQGRHFGINTETG 1548
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V + V +VNDN P L Y+ I E S I + D D + + Y ++ GN
Sbjct: 1264 VKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEA 1323
Query: 129 SYFNIDIGSGSL 140
FN+D +G L
Sbjct: 1324 GQFNLDSATGQL 1335
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y+ I EN+ + Q A+D D + I Y P+ +F I S+ T
Sbjct: 3339 YHCYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSF 3398
Query: 60 --------------GGPD---QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPI 102
PD + Y +Y+ V VN+ P L PV++ + E + +
Sbjct: 3399 DYEERRIYTLQIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRV 3458
Query: 103 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ A+D D D R+ Y + + + F ID +G
Sbjct: 3459 GAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTG 3494
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGG----- 61
Y + EN+ I+ + A+D D P+ + Y IS GN F++D + TGG
Sbjct: 3234 YQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVD---ERTGGIVIQQ 3290
Query: 62 ----------------------PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGI 99
P ++ I + +VNDN P+ Y+ I EN+
Sbjct: 3291 QLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVG 3350
Query: 100 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
+ Q A+D D + I Y P+ +F I
Sbjct: 3351 TFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFI 3384
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
IQV + NDN P+ D VY I EN + Q+ A D DL + ++SY + +
Sbjct: 1910 IQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDV 1969
Query: 131 FNIDIGSGSL 140
F+++ +G L
Sbjct: 1970 FSLNPQTGML 1979
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP 62
+D + N SG + L + G+LD + R SY++ +I + G P
Sbjct: 201 VDNKFRLVTTANPSGDTSYLHLETT-GNLDRESRGSYQL-----------NISARDGGSP 248
Query: 63 DQV-YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK 121
+ YL V + + +VNDN P+ Y + E P+V + ASD DL + +I+Y
Sbjct: 249 PRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYY 308
Query: 122 ISAGNPESYFNIDIG 136
++ + N + G
Sbjct: 309 LAETEHQFTVNPETG 323
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 73 VQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
+ +VND+ P+ Y + E LAA+D DL + RISY+I GN E F
Sbjct: 1039 IADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFG 1098
Query: 133 I 133
+
Sbjct: 1099 V 1099
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 36/171 (21%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI--DIGS--- 56
DP Y A + EN S ++Q++A+D D + RI Y I G+ F+I D G
Sbjct: 2278 FDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRV 2337
Query: 57 ------------DLTGGPDQVYLI--------VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
LT + L + I + ++NDN P LD Y A+++EN
Sbjct: 2338 AKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMEN- 2396
Query: 97 SGILP-----IVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSLG 141
+P ++ + A D D P + ++ Y + G+ + F I+ SG +
Sbjct: 2397 --TVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSD-LFRINASSGDIA 2444
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 21 IVQLAASDGD------LDPDQRISYKISAGNPESYFNIDIGSD-LTGGPDQVYLIVYIQV 73
+ ++ AS GD LD +Q+ Y ++ +D GS LTG IV ++V
Sbjct: 2433 LFRINASSGDIALLKPLDREQQSEYTLT------LVAMDTGSPPLTGTG-----IVRVEV 2481
Query: 74 QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNI 133
Q++NDN P+ Y+A + EN ++ A+D D + ++ + + G F+I
Sbjct: 2482 QDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNL-LGEHMHRFHI 2540
Query: 134 DIGSGSL 140
D +G +
Sbjct: 2541 DSETGEI 2547
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 30/158 (18%)
Query: 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------- 59
A + EN + +A D D + R S +I +GN +F ++ +DL
Sbjct: 394 ATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLD 453
Query: 60 ----------------GGPDQV---YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
G P + +LI I V +VND+ P+ Y A + E
Sbjct: 454 REEIGKYNLTVVAMDQGTPARTTTAHLI--IDVNDVNDHEPVFEKSEYSAVLSELAPTGS 511
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
+ + A+D D + ++ Y I +GN +F++D +G
Sbjct: 512 FVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTG 549
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 127
+ I++ + NDN P+ DP Y A + EN S ++Q++A+D D + RI Y I G+
Sbjct: 2264 LLIRILDENDNSPV-FDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQ 2322
Query: 128 ESYFNIDIGSG 138
F+I +G
Sbjct: 2323 NHDFSISEDTG 2333
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 25/142 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLTGGPDQVYLI----- 68
++++ +SD DL + SY S NP F NI + L Y++
Sbjct: 2931 VIRVTSSDLDLGANANASYSFSE-NPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVAS 2989
Query: 69 ---------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD-PDQRI 118
+ I +Q+ NDN P Y E Q I + Q+ A+D D P+ I
Sbjct: 2990 DGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVI 3049
Query: 119 SYKISAGNPESYFNIDIGSGSL 140
SY + P F+ID +G +
Sbjct: 3050 SYSLQ--QPSPMFSIDPATGEV 3069
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
D+ +++ + +N++ P Y + EN+ I+ + A+D D P+ + Y I
Sbjct: 3211 DETRVVIVVTGENMD--TPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSI 3268
Query: 123 SAGNPESYFNIDIGSGSL 140
S GN F++D +G +
Sbjct: 3269 SGGNERQDFSVDERTGGI 3286
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 68 IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
++ + V + NDN P+ +Y A+++E +S I + ASD D + + Y++
Sbjct: 2795 LITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRL 2849
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 3 LDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---- 58
L PV++ + E + + + A+D D D R+ Y + + + F ID + L
Sbjct: 3440 LQPVFHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVA 3499
Query: 59 ----------------------TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G D V I +Q+ ND P + Y + I E
Sbjct: 3500 RHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAA 3558
Query: 97 SGILPIVQLAASDGDLDP-DQRISYKISAGNPESYFNIDIGSGSL 140
+ + A D D+ + + SY I GN + F ID+ +G +
Sbjct: 3559 PVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEI 3603
>sp|Q5DRC6|PCDB8_PANTR Protocadherin beta-8 OS=Pan troglodytes GN=PCDHB8 PE=3 SV=1
Length = 801
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 52 IDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD 111
+D GS G QVY I+V +VNDN P P Y QI E+ +V+++A+D D
Sbjct: 216 LDGGSPPRSGTAQVY----IEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVD 271
Query: 112 LDPDQRISYKISAGNPE--SYFNIDIGSGSL 140
+ ISY + + E F +D +G +
Sbjct: 272 TGVNGEISYSLFQASDEISKTFKVDFLTGEI 302
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I G P +L + + V +VNDN P Y + EN S L I ++A+
Sbjct: 418 YNVTITVTDLGTPGLTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSAT 477
Query: 109 DGDLDPDQRISYKI 122
D D + +++Y +
Sbjct: 478 DRDSGTNAQVTYSL 491
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT------- 59
Y +I EN ++ + A+DGD + + Y++ G F ID S +
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSGVVRTRAVVD 431
Query: 60 -------------------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGIL 100
GP V+I V++ NDN P + Y Q+ E+ +
Sbjct: 432 REEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAVNT 491
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++++ A+D D + I Y I +GN + F + SGSL
Sbjct: 492 AVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSL 531
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
V I V +VNDN PM PVY ++ E+ + ++ L A D D + I+Y+++ GN
Sbjct: 688 VSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVLTLRAR--DRDANSVITYQLTGGNTR 745
Query: 129 SYFNIDIGSG 138
+ F + SG
Sbjct: 746 NRFALSSQSG 755
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y + E+ ++Q++A+D D P+ R+ Y G P S
Sbjct: 912 YQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 971
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P+ + V IQV ++NDN P+ + VE S +
Sbjct: 972 DRENVAVYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPV-FEKDELELFVEENSPVG 1030
Query: 101 PIV-QLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+V ++ A+D D P+ +I Y+I GN F +D+ SG L
Sbjct: 1031 SVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDL 1071
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 25/141 (17%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF-------NIDIGSDLT 59
Y Q+ E+ + ++++ A+D D + I Y I +GN + F ++D+ + L
Sbjct: 479 YVVQVPEDVAVNTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLD 538
Query: 60 GGPDQVYLI------------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
+ Y + V +QV +VNDN P+ + + A ++EN
Sbjct: 539 FEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHS 598
Query: 102 IVQLAASDGDLDPDQRISYKI 122
++ + A D D + R+ Y++
Sbjct: 599 VLHIQAVDADAGENARLQYRL 619
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 32/163 (19%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGSDLT-- 59
P Y + EN+ +++L A D D R+SY++ A E YF ID +
Sbjct: 263 PSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAATGAVTT 322
Query: 60 ---------------------GGPDQ---VYLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
G P + YL V V + ND+ P+ Y +I EN
Sbjct: 323 ARSLDRETKDTHVLKVSAVDHGSPRRSAATYLTV--TVSDTNDHSPVFEQSEYRERIREN 380
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
++ + A+DGD + + Y++ G F ID SG
Sbjct: 381 LEVGYEVLTIRATDGDAPSNANMRYRLLEG-AGGVFEIDARSG 422
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGP---- 62
Y + E++ I ++A+D D + RI+Y + P+ + D G+ T
Sbjct: 809 YTVSVSEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYE 868
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
DQ + I Q+ NDN P L Y + E+ ++Q
Sbjct: 869 DQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPSTSVLQ 928
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 929 VSATDRDSGPNGRLLY 944
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTG 60
M PVY ++ E+ + ++ L A D D + I+Y+++ GN + F + S +G
Sbjct: 701 MFTQPVYELRLNEDAAVGSSVLTLRARD--RDANSVITYQLTGGNTRNRFAL---SSQSG 755
Query: 61 G------------PDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVE 94
G ++ Y++ V+I V + N + P+ Y + E
Sbjct: 756 GGLITLALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE 815
Query: 95 NQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
++ I ++A+D D + RI+Y + +P F ID +G++
Sbjct: 816 DRPVGTSIATISATDEDTGENARITYVLE--DPVPQFRIDPDTGTI 859
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 62 PDQVYLIVYIQVQNVNDNVPMTLDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISY 120
P V I VQ+VNDN P +P YY A + E+Q P+ + A+D D D R+ Y
Sbjct: 773 PKSASSSVVITVQDVNDNDP-AFNPKYYEANVGEDQPPGTPVTTVTATDP--DEDSRLHY 829
Query: 121 KISAGNPESYFNIDIGSG 138
+I+ GN F I +G
Sbjct: 830 EITTGNTRGRFAITSQNG 847
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA------GNPESY-FNIDIGSDLT 59
Y A + E+ ++ ++A+D D+ + +I+Y ++ G+P+ + N G+ +T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 60 GGP-----DQVYLI-----------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
P YL+ V I V +VNDN P P+Y A I+E+
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAGNPE-SYFNIDIGSGSL 140
++Q+AASD D+ + RI Y +S + E F ID SG++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI 1065
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 19 LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI---VYIQVQN 75
+PI ++ + G + + + S +SY + +DL + V ++V +
Sbjct: 518 MPIFRIDSRSGVISTRSSLDRETS----DSYHLLVTAADLASAQSERRTATASVQVKVLD 573
Query: 76 VNDNVPMTLDPVYYAQIVENQSGIL---PIVQLAASDGDLDPDQRISYKISAGNPESYFN 132
NDN P + Y Q+ E+Q G + + A+D D + I Y I GN +S F+
Sbjct: 574 DNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFS 633
Query: 133 IDIGSG 138
ID SG
Sbjct: 634 IDSMSG 639
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 3 LDPVYY-AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID-------- 53
+P YY A + E+Q P+ + A+D D D R+ Y+I+ GN F I
Sbjct: 794 FNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEITTGNTRGRFAITSQNGRGLI 851
Query: 54 -IGSDLTGGPDQVYLI---------------VYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
I L ++ +L+ V+I + + N+ P+ + Y A + E+
Sbjct: 852 TIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAP 911
Query: 98 GILPIVQLAASDGDLDPDQRISYKI 122
++ ++A+D D+ + +I+Y +
Sbjct: 912 VGTTVLVVSATDSDVGVNAQITYSL 936
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 27/147 (18%)
Query: 4 DPVYYAQIVENQSGIL---PIVQLAASDGDLDPDQRISYKISAGNPESYFNID-IGSDLT 59
+ Y Q+ E+Q G + + A+D D + I Y I GN +S F+ID + D++
Sbjct: 583 ERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVS 642
Query: 60 ----------------------GGPDQVYLI-VYIQVQNVNDNVPMTLDPVYYAQIVENQ 96
G P + + + V + NDN P + ++EN
Sbjct: 643 LVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENV 702
Query: 97 SGILPIVQLAASDGDLDPDQRISYKIS 123
I+++ A D D + I+Y IS
Sbjct: 703 PVGYNIIRVQAYDSDEGANAEITYSIS 729
>sp|Q5DRB0|PCDGD_PANTR Protocadherin gamma-B1 OS=Pan troglodytes GN=PCDHGB1 PE=3 SV=1
Length = 927
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + + ++NDN P+ Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 434 ITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLE 493
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 494 PRELLSYVSVSPQSG 508
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNP 127
++I+V + NDN P+ VY + EN ++++ A+D D + I+Y +++
Sbjct: 225 IWIRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPIS 284
Query: 128 ESYFNIDIGSG 138
S FN++ +G
Sbjct: 285 TSLFNLNPNTG 295
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 47
Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 453 YVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLE 493
>sp|Q9Y5G3|PCDGD_HUMAN Protocadherin gamma-B1 OS=Homo sapiens GN=PCDHGB1 PE=2 SV=1
Length = 927
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
+ + + ++NDN P+ Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 434 ITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLE 493
Query: 129 -----SYFNIDIGSG 138
SY ++ SG
Sbjct: 494 PRELLSYVSVSPQSG 508
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYK-ISAGNP 127
++I+V + NDN P+ VY + EN ++++ A+D D + I+Y +++
Sbjct: 225 IWIRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPIS 284
Query: 128 ESYFNIDIGSG 138
S FN++ +G
Sbjct: 285 TSLFNLNPNTG 295
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 47
Y + EN I Q++ASD DL P+ R+SY I A + E
Sbjct: 453 YVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLE 493
>sp|Q5DRA5|PCDGJ_PANTR Protocadherin gamma-B7 OS=Pan troglodytes GN=PCDHGB7 PE=3 SV=1
Length = 929
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I + G P + + + +VNDN P+ Y + EN I Q++AS
Sbjct: 418 YNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSAS 477
Query: 109 DGDLDPDQRISYKISAGNPES 129
D D P+ R+SY + A + ES
Sbjct: 478 DPDFGPNGRVSYSLIASDLES 498
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 48
Y + EN I Q++ASD D P+ R+SY + A + ES
Sbjct: 456 AYLVHVPENNQPGASIAQVSASDPDFGPNGRVSYSLIASDLES 498
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKIS 123
L V+I++ + ND+ P+ P+Y A + EN + IV++ A+D D + + +KI
Sbjct: 1030 LHVFIRILDRNDHRPVAKKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIE 1089
Query: 124 AGNPESYFNIDIGSG 138
G+P+S+F ID+ SG
Sbjct: 1090 RGDPQSFFRIDLTSG 1104
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 33/159 (20%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQR---ISYKISAGNPESYFNIDIGSDLT-- 59
P+Y A + EN + IV++ A+D D + + +KI G+P+S+F ID+ S
Sbjct: 1049 PMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSFFRIDLTSGYITT 1108
Query: 60 ----------------------GGPDQV--YLIVYIQVQNVNDNVPMTLDPVYYAQIVEN 95
GG Q+ +IV + V + NDN P +++ +
Sbjct: 1109 SGIRRLDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQAIHHYSVRSK 1168
Query: 96 QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+G L ++ A D D + R++Y I+ G ++ F+ID
Sbjct: 1169 FAGKL--CRIFAVDADEGENARLTYNITEG--DARFSID 1203
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ + + NDN P + +A + E+ + + + A D D + ++Y I +GN ES
Sbjct: 1455 VNINDENDNSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESL 1514
Query: 131 FNIDIGSGSL 140
F ID SG +
Sbjct: 1515 FKIDAKSGEV 1524
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL 58
PI+ + D DL P+ + I GN E F ID +DL
Sbjct: 2793 PILHFSIKDDDLSPNNVSQFFIPKGNEEGVFWIDSNNDL 2831
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+FN+ + + D+ ++V + Q NDN P Y +++E++S + AS
Sbjct: 3045 FFNLTVVASDGEFEDKATILVTVIDQ--NDNAPTFEKSTYSMKVMESESIGYELAHFRAS 3102
Query: 109 DGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
G D ++ I Y + + S+ N++ +G L
Sbjct: 3103 GG--DQNETIEYYLKPSDVTSFVNLNAQTGIL 3132
>sp|Q9HBT6|CAD20_HUMAN Cadherin-20 OS=Homo sapiens GN=CDH20 PE=2 SV=2
Length = 801
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A + TG P + I++Q++NDN P LD Y A
Sbjct: 122 LDREERAQYTLRAQALDRR---------TGRPMEPESEFIIKIQDINDNEPKFLDGPYVA 172
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E ++Q+ A+D D DP R+ Y I G P YF++D +G
Sbjct: 173 TVPEMSPVGTSVIQVTATDAD-DPTYGNSARVVYSILQGQP--YFSVDSKTG 221
>sp|Q5DWV1|CAD20_RAT Cadherin-20 OS=Rattus norvegicus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A + TG P + I++Q++NDN P LD Y A
Sbjct: 122 LDREERAQYTLRAQALDRR---------TGRPMEPESEFIIKIQDINDNEPKFLDGPYVA 172
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E ++Q+ A+D D DP R+ Y I G P YF++D +G
Sbjct: 173 TVPEMSPVGTSVIQVTATDAD-DPTYGNSARVVYSILQGQP--YFSVDSKTG 221
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 11 IVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVY 70
IVE+ SGI+ ++ LD + Y + A + +D G P + + V
Sbjct: 90 IVESTSGIVRTLR------RLDRENVAQYILRA------YAVDKGMP----PARTPMEVT 133
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESY 130
+ V +VNDN P+ + + EN L + ++ A+D D + +I Y+I GN
Sbjct: 134 VTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEV 193
Query: 131 FNIDIGSGSL 140
F +DI SG L
Sbjct: 194 FQLDIFSGEL 203
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 63 DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
D YL I V +VNDN P L Y + E+ ++Q++A+D D + R+ Y
Sbjct: 22 DTTYL--EILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSGLNGRVFY 77
>sp|Q9Z0M3|CAD20_MOUSE Cadherin-20 OS=Mus musculus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A + TG P + I++Q++NDN P LD Y A
Sbjct: 122 LDREERAQYTLRAQALDRR---------TGRPMEPESEFIIKIQDINDNEPKFLDGPYIA 172
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E ++Q+ A+D D DP R+ Y I G P YF++D +G
Sbjct: 173 TVPEMSPVGTSVIQVTATDAD-DPTYGNSARVVYSILQGQP--YFSVDSKTG 221
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 65 VYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124
+ ++ + +Q+ NDN P L P Y A + E++ P++Q+ A D D +ISY ++A
Sbjct: 2153 AFTVLTLTLQDANDNAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAA 2212
Query: 125 GNP-ESYFNID 134
P F++D
Sbjct: 2213 SQPARGLFHVD 2223
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 31 LDPDQRISYKISAGNPESYFNIDI---GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPV 87
LDPD + + A + E I++ D P ++ V + V++ ND+ P
Sbjct: 1696 LDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAH 1755
Query: 88 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
++ E Q + L ASD D+ + ++ Y+I G+P F +D+ SG G
Sbjct: 1756 LSLEVPEGQDPQT-LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFG 1808
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES---YFNIDIGS------- 56
Y A + E +Q+ A+D D P +SY + AG S F ID S
Sbjct: 583 YNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTR 642
Query: 57 --DLTGGPDQ------------VYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGIL 100
D GP + +VY++V + NDN P Y A I
Sbjct: 643 TLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQSPPGT 702
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+++L A D D R+SY I AGN F +D SG L
Sbjct: 703 AVLRLRAHDPDQGSHGRLSYHILAGNSPPLFTLDEQSGLL 742
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
+V++ A D D + +++Y ++ G +F+ID S +
Sbjct: 492 VVRVTARDPDQGTNGQVTYSLAPGAHTHWFSIDPTSGIITTAASLDYELEPQPQLIVVAT 551
Query: 60 -GG--PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
GG P V + +Q+VNDN P Y A + E +Q+ A+D D P
Sbjct: 552 DGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFG 611
Query: 117 RISYKISAGNPES---YFNIDIGSG 138
+SY + AG S F ID SG
Sbjct: 612 LLSYSLGAGLGSSGSPPFRIDAHSG 636
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 27/147 (18%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDL---------------------- 58
++ + ASD D P + + +S+G+P F +D S
Sbjct: 2621 LLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARHQLVVQAA 2680
Query: 59 -TGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQR 117
G V I+VQ+VND+ P + + ENQ + L A DGD R
Sbjct: 2681 DPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGDAGAFGR 2740
Query: 118 ISYKISAGNP----ESYFNIDIGSGSL 140
+ Y + P F ++ +G L
Sbjct: 2741 LRYSLLEAGPGPEGREAFALNSSTGEL 2767
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 77 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIG 136
NDN P+ Y + E+ ++ + ASD D P + + +S+G+P F +D
Sbjct: 2596 NDNPPVFTRASYRVTVPEDTPVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDES 2655
Query: 137 SGSL 140
SG+L
Sbjct: 2656 SGTL 2659
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 25/144 (17%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPD----------------- 63
+ L ASD D+ + ++ Y+I G+P F +D+ S G
Sbjct: 1769 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEAR 1828
Query: 64 -------QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
L++ + V + ND+ P P Y ++ E+ ++QL A D D +
Sbjct: 1829 DGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGANG 1888
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
++Y + AG F ++ SG L
Sbjct: 1889 HVTYYLGAGT-AGAFLLEPSSGEL 1911
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP + + + V++VNDN P +Y ++E+ I+ ++A+D D + ISY
Sbjct: 2354 GPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDSGANGHISY 2413
Query: 121 KISAGNPESYFNIDIGSGSL 140
++ +P F++D +G+L
Sbjct: 2414 HLA--SPADGFSVDPNNGTL 2431
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 20 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79
P+ +L + G+LD + R Y + E+Y D GS P + ++ + + ++ND+
Sbjct: 203 PVPELVVT-GELDRENRSHYMLQL---EAY---DGGSP----PRRAQALLDVTLLDINDH 251
Query: 80 VPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGS 137
P Y+A + E+ + P++Q+ ASD D + ++Y+I+ E F+ID +
Sbjct: 252 APAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQSEGDGPFSIDAHT 311
Query: 138 GSL 140
G L
Sbjct: 312 GLL 314
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID---------------- 53
++ E+Q + + A D DL R+SY++++G + +F +
Sbjct: 1553 RLPEDQPPGPAALHVVARDPDLGEAARVSYRLASGG-DGHFRLHSSTGALSVVRPLDREQ 1611
Query: 54 --------IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQL 105
+ SD P ++ + V +VND P Y + EN ++ L
Sbjct: 1612 RAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRENNPPGTSLLTL 1671
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
A+D D+ + +++Y G F++D +G L
Sbjct: 1672 RATDPDVGANGQVTY---GGVSSESFSLDPDTGVL 1703
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP---IVQL 105
+N+ + + +G P + + V +VNDN P +Y + + + LP +V++
Sbjct: 438 YNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVA--LPGSFVVRV 495
Query: 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSG 138
A D D + +++Y ++ G +F+ID SG
Sbjct: 496 TARDPDQGTNGQVTYSLAPGAHTHWFSIDPTSG 528
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 29/164 (17%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN------------------- 45
P Y ++ E+ ++QL A D D + ++Y + AG
Sbjct: 1858 PAYSVEVPEDVPAGTLLLQLQAHDPDAGANGHVTYYLGAGTAGAFLLEPSSGELRTAAAL 1917
Query: 46 -----PESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGI 99
P F++ GP + V I V++VND+ P P+ S
Sbjct: 1918 DREQCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFS 1977
Query: 100 LPIVQLA---ASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P + LA A D D + I Y++ AG P +D +G +
Sbjct: 1978 TPTLALATLRAEDRDAGANASILYRL-AGTPPPGTTVDSYTGEI 2020
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 68 IVYIQVQNVNDNVP-MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V + + N N++ P ++ DP + A + ENQ + ++ A+D D P+ R++Y +
Sbjct: 1090 TVRVSILNQNEHSPRLSEDPTFLA-VAENQPPGTSVGRVFATDRDSGPNGRLTYSL 1144
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 30/157 (19%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID------------ 53
+Y ++E+ I+ ++A+D D + ISY ++ +P F++D
Sbjct: 2380 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHLA--SPADGFSVDPNNGTLFTIVGT 2437
Query: 54 --IGSDLTGGPDQV-------------YLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSG 98
+G D +G D V V++Q+Q+ ND+ P Y + E+
Sbjct: 2438 VALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDLPP 2497
Query: 99 ILPIVQLAASDGDLDPDQ-RISYKISAGNPESYFNID 134
++ L A+D D + Y I +GN F ++
Sbjct: 2498 GSTLLTLEATDADGSRSHAAVDYSIISGNWGRVFQLE 2534
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 28/144 (19%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT--------------------- 59
IVQ G L P ++ +S G+P F++D S L
Sbjct: 811 IVQAHNPPGRLAP---VTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLELEVRA 867
Query: 60 -GGPDQVYLIVYIQV--QNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ 116
G + + ++V +VNDN P P + N + PI L A D D +
Sbjct: 868 GSGVPPAFAVARVRVLLDDVNDNSPAFPAPEDTVLLPPNTAPGTPIYTLRALDPDSGVNS 927
Query: 117 RISYKISAGNPESYFNIDIGSGSL 140
R+++ + AG F +D +G +
Sbjct: 928 RVTFTLLAGG-GGAFTVDPTTGHV 950
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF---------------- 50
Y Q+ E+ ++++ A+D D + I Y I +GN F
Sbjct: 464 YVVQVPEDVGLNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLD 523
Query: 51 -------NIDIGSDLTGGPDQVYL--IVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
++ I + G P + +V +QV +VNDN P+ + + A ++EN P
Sbjct: 524 FEDVQKYSLSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYP 583
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141
+V + A D D + R+ Y++ + S F +G GS G
Sbjct: 584 VVHIQAVDADSGENARLHYRLV--DTASTF---LGGGSAG 618
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISY 120
GP VYI+V++ NDN P + Y Q+ E+ ++++ A+D D + I Y
Sbjct: 437 GPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLRVQATDRDQGQNAAIHY 496
Query: 121 KISAGNPESYFNIDIGSGSL 140
I +GN F + SG L
Sbjct: 497 SILSGNVAGQFYLHSLSGIL 516
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG---------NPES--------- 48
Y I E+ I+Q++A+D D P+ R+ Y G P S
Sbjct: 897 YQGSIFEDAPPSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRL 956
Query: 49 ------YFNIDIGSDLTGGPDQVYLIVYIQVQ--NVNDNVPMTLDPVYYAQIVENQSGIL 100
+N+ + G P + V IQV ++NDN PM + EN
Sbjct: 957 DRENVAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGS 1016
Query: 101 PIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
+ ++ A+D D P+ +I Y+I G+ +F +D+ +G L
Sbjct: 1017 VVAKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDL 1056
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 22/136 (16%)
Query: 7 YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLT----GGP 62
Y + E++ I L+A+D D + RI+Y I P+ + D G+ T
Sbjct: 794 YTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYE 853
Query: 63 DQVYLIVYIQVQN------------------VNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
+QV + I Q+ NDN P L Y I E+ I+Q
Sbjct: 854 NQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAPPSTSILQ 913
Query: 105 LAASDGDLDPDQRISY 120
++A+D D P+ R+ Y
Sbjct: 914 VSATDRDSGPNGRLLY 929
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN---------IDIG 55
P Y ++ E+ + ++ L A D D + I+Y+++ GN + F I +
Sbjct: 690 PTYELRLNEDAAVGSSVLTLQARD--RDANSVITYQLTGGNTRNRFALSSQRGGGLITLA 747
Query: 56 SDLTGGPDQVYLI--------------VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILP 101
L +Q Y++ V I V + N + P+ Y + E++
Sbjct: 748 LPLDYKQEQQYVLAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTS 807
Query: 102 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
I L+A+D D + RI+Y I +P F ID SG++
Sbjct: 808 IATLSANDEDTGENARITYVIQ--DPVPQFRIDPDSGTM 844
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 75 NVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNID 134
+VNDN P+ P Y ++ E+ + ++ L A D D + I+Y+++ GN + F +
Sbjct: 679 DVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQAR--DRDANSVITYQLTGGNTRNRFALS 736
Query: 135 IGSG 138
G
Sbjct: 737 SQRG 740
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 27/148 (18%)
Query: 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE---SYFNIDIGS----- 56
P Y + EN+ I+QL A ++R+SY + E YF ID +
Sbjct: 248 PNYQVALFENEPAGTLILQLHAHYTIEGEEERVSYYMEGLFDERSRGYFRIDSATGAVST 307
Query: 57 -------------------DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS 97
D + P + + V++ ND+ P+ Y ++ EN
Sbjct: 308 DSVLDRETKETHVLRVKAVDYSTPPRSATTYITVLVKDTNDHSPVFEQSEYRERVRENLE 367
Query: 98 GILPIVQLAASDGDLDPDQRISYKISAG 125
++ + ASD D + + Y++ G
Sbjct: 368 VGYEVLTIRASDRDSPINANLRYRVLGG 395
>sp|Q6W3B0|DSG4_RAT Desmoglein-4 OS=Rattus norvegicus GN=Dsg4 PE=1 SV=1
Length = 1040
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 33/145 (22%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAG------------NPES------------ 48
E+ S PI ++ + D + QRI+Y+IS NP +
Sbjct: 62 EDNSKRNPIARIRS---DCEVSQRITYRISGAGIDRPPYGVFTINPRTGEINITSVVDRE 118
Query: 49 ---YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
F I + + G D + L + ++V +VNDN P+ VY A I EN +V+
Sbjct: 119 ITPLFLIHCRALNSRGEDLERPLELRVKVMDVNDNPPVFTQNVYTANIEENSDANALVVK 178
Query: 105 LAASDGDLDP--DQRISYKISAGNP 127
L+A+D D D + +I+YKI + P
Sbjct: 179 LSATDADEDNHLNSKIAYKIISQEP 203
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKI----SAGNP------------- 46
VY A I EN +V+L+A+D D D + +I+YKI AG P
Sbjct: 161 VYTANIEENSDANALVVKLSATDADEDNHLNSKIAYKIISQEPAGAPMFMVNRYTGEVRT 220
Query: 47 ---------ESYFNIDI-GSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
S +N+ + GSD G D + I++ +VNDN P+ L+ Y+ +E
Sbjct: 221 MSNFLDREQHSMYNLLVRGSDRDGATDGLSSECDCRIKILDVNDNFPI-LEKTSYSASIE 279
Query: 95 NQSGILPIVQLAASDGDLD-PDQRIS-YKISAGNPESYFNI 133
+++L A D D + D ++ Y I +GN ++F I
Sbjct: 280 ENCLSSELIRLQAIDLDEEGTDNWLAQYSILSGNDGNWFEI 320
>sp|Q7TMD7|DSG4_MOUSE Desmoglein-4 OS=Mus musculus GN=Dsg4 PE=1 SV=1
Length = 1041
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 33/145 (22%)
Query: 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAG------------NPES------------ 48
E+ S PI ++ + D + QRI+Y+IS NP +
Sbjct: 62 EDNSKRNPIARIRS---DCEVSQRITYRISGAGIDRPPYGVFTINPRTGEINITSVVDRE 118
Query: 49 ---YFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ 104
F I + + G D + L + ++V +VNDN P+ VY A I EN +V+
Sbjct: 119 ITPLFLIHCRALNSRGEDLERPLELRVKVMDVNDNPPVFTQNVYTANIEENSDANALVVK 178
Query: 105 LAASDGDLDP--DQRISYKISAGNP 127
L+A+D D D + +I+YKI + P
Sbjct: 179 LSATDADEDNHLNSKIAYKIISQEP 203
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 6 VYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKI----SAGNP------------- 46
VY A I EN +V+L+A+D D D + +I+YKI AG P
Sbjct: 161 VYTANIEENSDANALVVKLSATDADEDNHLNSKIAYKIISQEPAGAPMFMVNRYTGEVRT 220
Query: 47 ---------ESYFNIDI-GSDLTGGPDQVY--LIVYIQVQNVNDNVPMTLDPVYYAQIVE 94
S +N+ + GSD G D + I++ +VNDN P+ L+ Y+ +E
Sbjct: 221 MSNFLDREQHSMYNLLVRGSDRDGATDGLSSECDCRIKILDVNDNFPI-LEKTSYSASIE 279
Query: 95 NQSGILPIVQLAASDGDLD-PDQRIS-YKISAGNPESYFNI 133
+++L A D D + D ++ Y I +GN ++F I
Sbjct: 280 ENCLSSELIRLQAIDLDEEGTDNWLAQYSILSGNDGNWFEI 320
>sp|Q8QGH3|CAD20_CHICK Cadherin-20 OS=Gallus gallus GN=CDH20 PE=1 SV=1
Length = 798
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A + TG P + I++Q++NDN P LD Y A
Sbjct: 121 LDREERSQYTLRAQALDRR---------TGRPMEPESEFIIKIQDINDNEPKFLDGPYVA 171
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E ++Q+ A+D D DP R+ Y I G P YF++D +G
Sbjct: 172 SVPEMSPVGTSVIQVTATDAD-DPTYGNSARVVYSILQGQP--YFSVDSRTG 220
>sp|Q5DRA8|PCDGG_PANTR Protocadherin gamma-B4 OS=Pan troglodytes GN=PCDHGB4 PE=3 SV=1
Length = 923
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 45 NPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
NPE +NI + + G P + + + +VNDN P+ Y + EN I
Sbjct: 413 NPE--YNITVTARDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASIS 470
Query: 104 QLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Q++ASD DL P+ ++SY I A + E SY +I SG
Sbjct: 471 QVSASDPDLGPNGQVSYCIIASDLEQRELSSYVSISAESG 510
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 51/120 (42%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
++ SDG P+ + + +SY D P +++ V + NDN
Sbjct: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ +Y + EN ++Q+ A+D D + I++ S + + F+++ +G +
Sbjct: 240 PVFSQDIYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEI 299
>sp|Q9UN71|PCDGG_HUMAN Protocadherin gamma-B4 OS=Homo sapiens GN=PCDHGB4 PE=2 SV=1
Length = 923
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 45 NPESYFNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIV 103
NPE +NI + + G P + + + +VNDN P+ Y + EN I
Sbjct: 413 NPE--YNITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASIS 470
Query: 104 QLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Q+ ASD DL P+ ++SY I A + E SY +I SG
Sbjct: 471 QVRASDPDLGPNGQVSYCIMASDLEQRELSSYVSISAESG 510
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 51/120 (42%)
Query: 21 IVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80
++ SDG P+ + + +SY D P +++ V + NDN
Sbjct: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239
Query: 81 PMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140
P+ VY + EN ++Q+ A+D D + I++ S + + F+++ +G +
Sbjct: 240 PVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSFSEASQITQFDLNSNTGEI 299
>sp|Q9Y5H9|PCDA2_HUMAN Protocadherin alpha-2 OS=Homo sapiens GN=PCDHA2 PE=1 SV=1
Length = 948
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS---AG 125
+ I+V +VNDN P VY +++EN + +V+L ASD D P+ I Y + +
Sbjct: 228 ILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDVSS 287
Query: 126 NPESYFNIDIGSGSL 140
++ F ID SG +
Sbjct: 288 TIQTKFTIDPISGEI 302
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
V I+V +VNDN P P Y + EN I ++A D D + +SY +
Sbjct: 441 VSIEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSL 494
>sp|Q91838|CAD20_XENLA Cadherin-20 OS=Xenopus laevis GN=cdh20 PE=2 SV=1
Length = 790
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 31 LDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA 90
LD ++R Y + A +D + P+ +++ ++Q++NDN P LD Y A
Sbjct: 115 LDREERSQYTLKAQA------LDRRTTRPMEPESEFIV---KIQDINDNEPKFLDGPYTA 165
Query: 91 QIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGNPESYFNIDIGSG 138
+ E I+Q++A+D D DP R+ Y I G P YF++D +G
Sbjct: 166 SVPEMSPVGTSIIQVSATDAD-DPTYGSSARVVYSILQGQP--YFSVDSKTG 214
>sp|P55288|CAD11_MOUSE Cadherin-11 OS=Mus musculus GN=Cdh11 PE=1 SV=1
Length = 796
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP----DQRISYKISAGN 126
++VQ++NDN P L +Y+A + E + ++Q+ ASD D DP ++ Y I G
Sbjct: 147 VKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDAD-DPTYGNSAKLVYSILEGQ 205
Query: 127 PESYFNIDIGSG 138
P YF+++ +G
Sbjct: 206 P--YFSVEAQTG 215
>sp|Q9UN66|PCDB8_HUMAN Protocadherin beta-8 OS=Homo sapiens GN=PCDHB8 PE=2 SV=3
Length = 801
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128
VYI+V +VNDN P P Y QI E+ +V+++A+D D + ISY + + E
Sbjct: 229 VYIEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDE 288
Query: 129 --SYFNIDIGSGSL 140
F +D +G +
Sbjct: 289 ISKTFKVDFLTGEI 302
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 50 FNIDIGSDLTGGPD-QVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAAS 108
+N+ I G P +L + + V +VNDN P Y + EN S L I ++A+
Sbjct: 418 YNVTITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSAT 477
Query: 109 DGDLDPDQRISYKI 122
D D + +++Y +
Sbjct: 478 DRDSGTNAQVTYSL 491
>sp|Q5DRA7|PCDGH_PANTR Protocadherin gamma-B5 OS=Pan troglodytes GN=PCDHGB5 PE=3 SV=1
Length = 923
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 27 SDGDLDPDQRISYKISAGNPESYFNIDIGSDLTGGPDQVYLI-VYIQVQNVNDNVPMTLD 85
+DG LD +Q PE +N+ I + G P I V + +++VNDN P+
Sbjct: 402 TDGTLDREQ---------TPE--YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQ 450
Query: 86 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE-----SYFNIDIGSG 138
Y + EN I Q+ ASD DL + ++SY I A + E SY ++ SG
Sbjct: 451 ASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSAQSG 508
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 69 VYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 122
+ IQV + NDN P+ VY + EN ++Q++A+D D + I+Y
Sbjct: 228 LRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSF 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.138 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,207,560
Number of Sequences: 539616
Number of extensions: 2407488
Number of successful extensions: 4706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 3051
Number of HSP's gapped (non-prelim): 1462
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)