Query psy11815
Match_columns 141
No_of_seqs 205 out of 1137
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 19:42:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 8E-34 2.7E-38 210.2 12.0 141 1-141 105-277 (322)
2 2qvi_A Cadherin-2; beta barrel 100.0 1.1E-32 3.9E-37 193.7 14.3 133 8-141 6-172 (215)
3 2a4e_A Cadherin-11; dimer, cal 100.0 8.8E-32 3E-36 189.2 15.5 132 6-141 5-166 (215)
4 2x2u_A Proto-oncogene tyrosine 100.0 1.9E-34 6.6E-39 206.4 1.7 140 1-141 2-196 (246)
5 3mvs_A Cadherin-23, otocadheri 100.0 1.2E-31 4E-36 187.9 11.8 132 2-141 8-165 (210)
6 3qrb_A Cadherin-1; cell adhesi 100.0 3.1E-31 1E-35 186.1 13.6 132 7-141 5-173 (213)
7 3k5r_A Cadherin 13; mouse, str 100.0 5.3E-31 1.8E-35 185.5 10.8 131 7-141 6-172 (218)
8 3ubf_A Neural-cadherin; cell a 100.0 2.5E-30 8.6E-35 191.0 14.3 134 2-141 106-270 (316)
9 3lnd_A CDH6 protein, cadherin 100.0 2.3E-31 7.8E-36 186.1 6.9 130 8-141 6-165 (207)
10 3ppe_A Vascular endothelial ca 100.0 7.8E-30 2.7E-34 177.8 14.6 128 7-141 5-162 (203)
11 3q2v_A Cadherin-1; cell adhesi 100.0 5.4E-30 1.8E-34 201.2 12.2 139 1-141 107-283 (550)
12 1l3w_A EP-cadherin, C-cadherin 100.0 4.2E-30 1.4E-34 201.7 11.4 139 1-141 113-289 (546)
13 3q2w_A Cadherin-2; cell adhesi 100.0 1.6E-29 5.4E-34 198.9 12.5 140 1-141 107-286 (559)
14 1q55_A EP-cadherin, C-cadherin 100.0 3.5E-29 1.2E-33 205.1 11.4 139 1-141 262-438 (880)
15 3ubh_A Neural-cadherin; cell a 100.0 4.8E-28 1.6E-32 184.8 15.6 132 1-141 218-378 (419)
16 3ubh_A Neural-cadherin; cell a 100.0 3.3E-28 1.1E-32 185.7 12.7 134 2-141 111-275 (419)
17 1l3w_A EP-cadherin, C-cadherin 100.0 3.5E-28 1.2E-32 190.8 12.2 138 1-141 226-395 (546)
18 3q2v_A Cadherin-1; cell adhesi 100.0 2.6E-27 8.9E-32 186.0 15.3 137 2-141 221-389 (550)
19 3q2w_A Cadherin-2; cell adhesi 99.9 4.4E-27 1.5E-31 185.0 15.2 137 2-141 223-395 (559)
20 4apx_B Protocadherin-15, otoca 99.9 6.3E-27 2.2E-31 167.0 13.2 136 5-141 20-195 (242)
21 2a62_A Cadherin-8; extracellul 99.9 4.9E-28 1.7E-32 179.2 6.8 131 7-141 5-165 (322)
22 1q55_A EP-cadherin, C-cadherin 99.9 3.6E-27 1.2E-31 193.2 12.2 138 1-141 375-544 (880)
23 3ubf_A Neural-cadherin; cell a 99.9 2.2E-25 7.7E-30 164.5 12.4 92 48-141 70-164 (316)
24 2yst_A Protocadherin-7; BH-PCD 99.9 1E-22 3.5E-27 130.7 8.3 81 1-81 13-119 (119)
25 2x2u_A Proto-oncogene tyrosine 99.8 4.4E-21 1.5E-25 137.1 6.5 83 2-84 139-245 (246)
26 2ee0_A Protocadherin-9; Ca dom 99.8 1.1E-21 3.9E-26 124.9 1.0 71 71-141 2-75 (114)
27 2yqg_A Desmoglein-2, HDGC; cad 99.8 6.3E-21 2.2E-25 123.0 2.3 85 1-86 11-123 (123)
28 2yst_A Protocadherin-7; BH-PCD 99.8 7.7E-21 2.6E-25 121.9 1.9 71 71-141 2-74 (119)
29 2a4e_A Cadherin-11; dimer, cal 99.8 3.4E-19 1.2E-23 125.0 9.6 82 1-82 106-215 (215)
30 2ee0_A Protocadherin-9; Ca dom 99.8 1.4E-18 4.9E-23 110.5 9.8 75 1-77 13-114 (114)
31 1ncg_A N-cadherin; cell adhesi 99.8 3.3E-19 1.1E-23 112.8 5.9 75 6-83 6-110 (110)
32 3mvs_A Cadherin-23, otocadheri 99.8 4.6E-18 1.6E-22 118.8 10.5 80 1-80 108-210 (210)
33 1wyj_A Protocadherin beta 14; 99.6 9.5E-18 3.2E-22 108.3 -0.5 82 5-91 11-123 (125)
34 3qrb_A Cadherin-1; cell adhesi 99.6 1.9E-15 6.5E-20 105.6 7.9 75 1-75 107-213 (213)
35 3ppe_A Vascular endothelial ca 99.6 8.6E-15 3E-19 101.7 10.3 75 1-75 103-203 (203)
36 3lnd_A CDH6 protein, cadherin 99.6 4.4E-15 1.5E-19 103.4 8.3 75 1-75 105-207 (207)
37 1zvn_A Mn-cadherin; strand dim 99.6 4.2E-15 1.4E-19 92.1 7.3 68 6-75 5-99 (99)
38 1zxk_A Cadherin-8; strand dime 99.6 7.1E-15 2.4E-19 90.9 6.7 67 7-75 5-98 (98)
39 2qvi_A Cadherin-2; beta barrel 99.6 4.1E-15 1.4E-19 104.2 5.7 75 1-75 107-215 (215)
40 4apx_B Protocadherin-15, otoca 99.5 2.5E-14 8.6E-19 101.8 8.6 76 1-76 126-238 (242)
41 3k5r_A Cadherin 13; mouse, str 99.5 2.7E-14 9.3E-19 100.1 8.4 75 1-75 107-218 (218)
42 3k6d_A T-cadherin; cell adhesi 99.5 6.3E-14 2.1E-18 86.8 6.5 65 7-75 5-99 (99)
43 3k6i_A T-cadherin; cell adhesi 99.5 3.9E-13 1.3E-17 83.2 8.5 64 8-75 6-99 (99)
44 3k6f_A T-cadherin; cell adhesi 99.5 1.8E-13 6.2E-18 84.9 6.8 65 7-75 6-100 (100)
45 2omz_B Epithelial-cadherin; le 99.4 2E-13 6.8E-18 85.4 5.2 67 7-76 9-105 (105)
46 2yqg_A Desmoglein-2, HDGC; cad 99.2 1.3E-12 4.5E-17 83.8 0.0 65 76-141 5-73 (123)
47 1zvn_A Mn-cadherin; strand dim 99.2 1.9E-11 6.4E-16 75.6 4.3 52 88-141 6-59 (99)
48 1zxk_A Cadherin-8; strand dime 99.2 2.5E-11 8.6E-16 74.8 4.3 52 88-141 5-58 (98)
49 1wuz_A Pcdha4 protein, CNR-EC1 99.1 2.3E-11 7.7E-16 75.7 1.4 69 5-79 3-103 (103)
50 3k6d_A T-cadherin; cell adhesi 99.0 2.9E-10 9.8E-15 70.2 3.3 50 88-141 5-60 (99)
51 3k6f_A T-cadherin; cell adhesi 98.9 1.3E-09 4.4E-14 67.3 3.9 49 89-141 7-61 (100)
52 3k6i_A T-cadherin; cell adhesi 98.9 1.9E-09 6.5E-14 66.4 4.6 49 89-141 6-60 (99)
53 1wyj_A Protocadherin beta 14; 98.8 3.8E-10 1.3E-14 72.5 0.5 55 85-141 10-67 (125)
54 1ncg_A N-cadherin; cell adhesi 98.8 2.9E-09 9.8E-14 66.8 4.1 52 87-141 6-63 (110)
55 1wuz_A Pcdha4 protein, CNR-EC1 98.8 1.4E-10 4.6E-15 72.2 -2.9 55 86-141 3-59 (103)
56 2omz_B Epithelial-cadherin; le 98.7 7.4E-09 2.5E-13 64.4 3.1 50 89-141 10-65 (105)
57 3rb5_A Na/Ca exchange protein; 93.2 1.7 5.9E-05 31.4 12.9 72 50-125 92-164 (298)
58 2yrl_A KIAA1837 protein; PKD d 89.0 1.4 4.9E-05 26.4 5.8 30 47-78 69-98 (102)
59 2yhg_A SDE_182CT, cellulose-bi 86.6 1.9 6.6E-05 32.9 6.4 27 47-73 410-436 (437)
60 3ead_A Na/Ca exchange protein; 86.5 4.4 0.00015 25.5 7.5 98 2-112 9-116 (137)
61 3gin_A Sodium/calcium exchange 83.5 5 0.00017 26.2 6.6 41 2-46 27-67 (160)
62 2wql_A Major allergen DAU C 1; 83.3 7.1 0.00024 25.2 10.8 68 9-81 56-128 (154)
63 3pe9_A Fibronectin(III)-like m 82.1 4.4 0.00015 24.2 5.4 28 47-75 61-88 (98)
64 3us9_A Sodium/calcium exchange 81.9 12 0.00041 26.9 14.8 55 67-125 128-182 (295)
65 3ie5_A Phenolic oxidative coup 76.5 13 0.00045 24.2 9.1 66 10-81 64-134 (165)
66 4a2l_A BT_4663, two-component 76.0 8.1 0.00028 31.1 6.8 59 23-86 712-788 (795)
67 1op4_A Neural-cadherin; beta s 75.4 3.2 0.00011 27.2 3.6 57 78-140 31-87 (159)
68 1op4_A Neural-cadherin; beta s 72.2 17 0.0006 23.7 6.5 57 2-60 36-111 (159)
69 4a8u_A Major pollen allergen B 69.7 19 0.00066 23.1 10.3 63 13-80 60-127 (159)
70 2vjg_A Major allergen DAU C 1; 69.1 20 0.00067 23.0 10.3 63 13-80 60-127 (154)
71 2y72_A Collagenase, collagenas 66.5 15 0.00053 20.8 7.6 26 47-74 59-84 (85)
72 2w1n_A O-GLCNACASE NAGJ; hexos 64.1 34 0.0011 23.8 7.1 25 47-72 211-235 (238)
73 2flh_A Cytokinin-specific bind 63.7 26 0.00088 22.3 9.1 59 18-81 65-128 (155)
74 3k3k_A Abscisic acid receptor 63.4 21 0.00073 24.3 5.8 45 10-57 102-148 (211)
75 1e09_A PRU AV 1; allergen, maj 62.4 27 0.00094 22.2 10.2 57 18-79 65-126 (159)
76 3ott_A Two-component system se 61.0 16 0.00054 29.2 5.6 58 23-85 677-753 (758)
77 2qim_A PR10.2B; trans-zeatin, 58.7 32 0.0011 21.9 8.8 55 20-79 67-126 (158)
78 3v9f_A Two-component system se 53.9 17 0.00059 29.1 4.7 28 47-74 748-775 (781)
79 1tw0_A Pathogenesis-related cl 53.8 40 0.0014 21.4 10.2 55 20-79 66-125 (157)
80 3jrs_A PYL1, putative uncharac 52.8 51 0.0017 22.4 7.0 46 9-57 105-152 (208)
81 2kpn_A Bacillolysin; solution 51.5 37 0.0013 20.3 5.7 55 24-80 33-90 (103)
82 3rt2_A Abscisic acid receptor 49.7 53 0.0018 21.7 6.8 45 10-57 78-124 (183)
83 2i9y_A Major latex protein-lik 46.0 57 0.0019 20.9 9.5 53 20-78 81-139 (166)
84 1icx_A Protein LLR18A, LLPR10. 45.7 55 0.0019 20.7 8.4 56 19-79 65-125 (155)
85 3oji_A Abscisic acid receptor 42.9 73 0.0025 21.3 6.6 45 9-56 85-131 (189)
86 2vq5_A S-norcoclaurine synthas 42.5 75 0.0026 21.3 7.9 63 12-79 85-152 (201)
87 2lv4_A Putative outer membrane 39.4 11 0.00039 23.6 1.2 31 50-80 49-79 (146)
88 2wql_A Major allergen DAU C 1; 37.9 77 0.0027 20.2 5.2 31 93-126 59-89 (154)
89 1vjh_A BET V I allergen family 37.4 68 0.0023 19.4 9.0 51 23-79 39-95 (122)
90 3oqu_A Abscisic acid receptor 36.8 96 0.0033 20.9 9.5 47 10-59 102-150 (205)
91 3pdd_A Glycoside hydrolase, fa 35.7 93 0.0032 20.4 11.8 16 97-112 151-166 (190)
92 3klq_A Putative pilus anchorin 35.6 85 0.0029 19.9 6.2 27 35-61 61-96 (141)
93 2dmk_A Midline 2 isoform 2; mi 34.5 58 0.002 19.4 4.0 15 47-61 91-105 (127)
94 1wgo_A VPS10 domain-containing 34.3 83 0.0029 19.5 6.7 25 47-74 94-118 (123)
95 3qht_C Monobody YSMB-1; fibron 25.1 75 0.0026 17.7 3.2 14 47-60 69-82 (97)
96 1bpv_A Titin, A71, connectin; 25.0 96 0.0033 18.1 3.7 14 47-60 79-92 (112)
97 3pdd_A Glycoside hydrolase, fa 24.7 1.5E+02 0.0052 19.4 9.6 57 47-111 61-121 (190)
98 3jrs_A PYL1, putative uncharac 22.1 1.9E+02 0.0064 19.5 5.9 22 102-126 117-138 (208)
99 2c4x_A Endoglucanase, ctcel9D- 22.0 1.8E+02 0.0062 20.3 5.1 63 47-111 69-146 (260)
100 3rws_A MTN13 protein; zeatin, 21.3 1.7E+02 0.0059 18.8 10.4 56 18-78 69-130 (168)
101 1row_A SSP-19, MSP-domain prot 21.0 1.4E+02 0.0047 17.8 3.8 24 116-140 29-52 (109)
102 2e7m_A Protein KIAA0319; PKD d 20.3 70 0.0024 19.5 2.3 26 47-75 80-105 (113)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=8e-34 Score=210.18 Aligned_cols=141 Identities=23% Similarity=0.323 Sum_probs=128.5
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC---CCCCeEEEEEecCCC-----------------------CeEEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNP-----------------------ESYFNIDI 54 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~---~~n~~v~y~i~~~~~-----------------------~~y~l~v~ 54 (141)
.|.+..|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|.++.+ ..|.|+|.
T Consensus 105 ~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~ 184 (322)
T 2a62_A 105 EFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQ 184 (322)
T ss_dssp CCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTTTCCEEECSSCCCGGGCSEEEEEEE
T ss_pred ccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecCCCEEEecccCCCcccCCeEEEEEE
Confidence 4889999999999999999999999999996 789999999987654 78999999
Q ss_pred EEECCCCC--CeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcEE
Q psy11815 55 GSDLTGGP--DQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFN 132 (141)
Q Consensus 55 a~d~~~~~--~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F~ 132 (141)
|+|.+.|+ ++++++|+|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..++..++|.
T Consensus 185 a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~ 264 (322)
T 2a62_A 185 AKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFE 264 (322)
T ss_dssp EEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBC
T ss_pred EEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEE
Confidence 99999864 8899999999999999999999999999999999999999999999999999999999999888778999
Q ss_pred Ee----CCCeEEC
Q psy11815 133 ID----IGSGSLG 141 (141)
Q Consensus 133 Id----~~tG~i~ 141 (141)
|+ +.+|.|.
T Consensus 265 I~~d~~~~tG~i~ 277 (322)
T 2a62_A 265 ITSDAQAQDGVIR 277 (322)
T ss_dssp CBCCTTTSEEEEE
T ss_pred EeccCCCceEEEE
Confidence 99 4689873
No 2
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.1e-32 Score=193.72 Aligned_cols=133 Identities=19% Similarity=0.233 Sum_probs=123.4
Q ss_pred EEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCC------C----------------------CeEEEEEEEEECC
Q psy11815 8 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN------P----------------------ESYFNIDIGSDLT 59 (141)
Q Consensus 8 ~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~------~----------------------~~y~l~v~a~d~~ 59 (141)
.++|+||++ |+.++++.|.|.|.+.|+.++|+|.++. . ..|.|+|.|+|.+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 678999999 9999999999999999999999999753 1 7999999999999
Q ss_pred CCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCC--CCCCeEEEEEEcCC----CCCcEEE
Q psy11815 60 GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGN----PESYFNI 133 (141)
Q Consensus 60 ~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~--~~~~~i~Y~i~~~~----~~~~F~I 133 (141)
.+++++++.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|. +.|+.++|+|..++ ..+.|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999998 67999999999876 3579999
Q ss_pred eCCCeEEC
Q psy11815 134 DIGSGSLG 141 (141)
Q Consensus 134 d~~tG~i~ 141 (141)
++.||.|+
T Consensus 165 d~~tG~i~ 172 (215)
T 2qvi_A 165 NNETGDII 172 (215)
T ss_dssp CTTTCEEE
T ss_pred cCCCcEEE
Confidence 99999883
No 3
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=8.8e-32 Score=189.18 Aligned_cols=132 Identities=25% Similarity=0.347 Sum_probs=119.0
Q ss_pred eeEEEEecCC--CCCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECC
Q psy11815 6 VYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLT 59 (141)
Q Consensus 6 ~y~~~V~E~~--~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~ 59 (141)
.|++.|.||. |.|+.|+++ |+|+|.+ |+.++|+|.++.. ..|.|+|.|+|.+
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 82 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRD 82 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECC
Confidence 3789999994 578888888 8999987 8899999987641 7999999999998
Q ss_pred C-CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCC---CCCCeEEEEEEcCCCCCcEEEeC
Q psy11815 60 G-GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNPESYFNIDI 135 (141)
Q Consensus 60 ~-~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~i~Y~i~~~~~~~~F~Id~ 135 (141)
. +++++.+.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.|+.++|+|..++ .+|.|++
T Consensus 83 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~ 160 (215)
T 2a4e_A 83 TNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVEA 160 (215)
T ss_dssp TCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEECT
T ss_pred CCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEeC
Confidence 5 5688899999999999999999999999999999999999999999999997 77899999999875 4899999
Q ss_pred CCeEEC
Q psy11815 136 GSGSLG 141 (141)
Q Consensus 136 ~tG~i~ 141 (141)
.||.|+
T Consensus 161 ~tG~I~ 166 (215)
T 2a4e_A 161 QTGIIR 166 (215)
T ss_dssp TTCEEE
T ss_pred CccEEE
Confidence 999983
No 4
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=206.44 Aligned_cols=140 Identities=15% Similarity=0.070 Sum_probs=120.3
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC--CCCeEE------EEEecC----------CC-------------CeE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRIS------YKISAG----------NP-------------ESY 49 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~--~n~~v~------y~i~~~----------~~-------------~~y 49 (141)
.|.++.|.++|+|++++|+.|++|.|+|+|.+ .+..+. |+|..+ .+ ..|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 38999999999999999999999999999984 456665 555432 11 667
Q ss_pred ------------EEEEEEEECCCC--CCeEEEEEEEEEEeCCCCCCc----------cCCCceEEEEecCCCCCceEEEE
Q psy11815 50 ------------FNIDIGSDLTGG--PDQVYLIVYIQVQNVNDNVPM----------TLDPVYYAQIVENQSGILPIVQL 105 (141)
Q Consensus 50 ------------~l~v~a~d~~~~--~~~~~~~v~i~V~d~Nd~~P~----------f~~~~~~~~v~e~~~~g~~v~~v 105 (141)
.|+|.|+|.+.+ +++++++|.|+|.|+|||+|. |.+..|.+.|.|+.++|+.|++|
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v 161 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFR 161 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECS
T ss_pred ccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEE
Confidence 999999999987 678889999999999999999 99999999999999999999999
Q ss_pred EEEECCCCCCCeEEEEEEcCCCCCcEEEeCCCeEEC
Q psy11815 106 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141 (141)
Q Consensus 106 ~a~D~D~~~~~~i~Y~i~~~~~~~~F~Id~~tG~i~ 141 (141)
.|+|+|.|.|+.|+|+|..++ ..+|.|++.||.|+
T Consensus 162 ~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~ 196 (246)
T 2x2u_A 162 LLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVS 196 (246)
T ss_dssp CHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEE
T ss_pred EEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEE
Confidence 999999999999999999875 57899999999984
No 5
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=1.2e-31 Score=187.90 Aligned_cols=132 Identities=27% Similarity=0.304 Sum_probs=119.1
Q ss_pred CCCCeeE--EEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEE
Q psy11815 2 TLDPVYY--AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIG 55 (141)
Q Consensus 2 f~~~~y~--~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a 55 (141)
|.+..|. +.|+|++++|+.|+++.|+|+|. +.+.|+|.+++. ..|.|+|.|
T Consensus 8 F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a 84 (210)
T 3mvs_A 8 FTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSV 84 (210)
T ss_dssp ECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEEEEE
T ss_pred cCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEEEEE
Confidence 7778886 79999999999999999999994 568999976532 799999999
Q ss_pred EECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcEEEeC
Q psy11815 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDI 135 (141)
Q Consensus 56 ~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F~Id~ 135 (141)
+|.+. ..++++.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..++ ++|.|++
T Consensus 85 ~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~--~~F~Id~ 159 (210)
T 3mvs_A 85 SDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPS--PFFAIDS 159 (210)
T ss_dssp ECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCC--SSEEECT
T ss_pred EeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCC--CCEEEeC
Confidence 99875 467899999999999999999999999999999999999999999999999999999997643 5899999
Q ss_pred CCeEEC
Q psy11815 136 GSGSLG 141 (141)
Q Consensus 136 ~tG~i~ 141 (141)
.||.|+
T Consensus 160 ~tG~i~ 165 (210)
T 3mvs_A 160 ARGIVT 165 (210)
T ss_dssp TTCEEE
T ss_pred CcEEEE
Confidence 999874
No 6
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.97 E-value=3.1e-31 Score=186.15 Aligned_cols=132 Identities=20% Similarity=0.316 Sum_probs=119.1
Q ss_pred eEEEEecCCC--CCceeEEEEeEECCCCCCCeEEEEEecCC----C------------------------CeEEEEEEEE
Q psy11815 7 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGN----P------------------------ESYFNIDIGS 56 (141)
Q Consensus 7 y~~~V~E~~~--~g~~v~~v~a~D~D~~~n~~v~y~i~~~~----~------------------------~~y~l~v~a~ 56 (141)
..++|+||++ .|+.|+++.| |.|. |+.++|+|.++. + ..|.|+|.|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAV 81 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEE
Confidence 4789999998 6788999999 7775 889999998732 1 7999999999
Q ss_pred ECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCC---CCCeEEEEEEcCC----CCC
Q psy11815 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGN----PES 129 (141)
Q Consensus 57 d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~---~~~~i~Y~i~~~~----~~~ 129 (141)
|.++++++++++|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|.+ .|+.++|+|..++ ..+
T Consensus 82 D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~ 161 (213)
T 3qrb_A 82 SSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 161 (213)
T ss_dssp ETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSC
T ss_pred eCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCC
Confidence 999988999999999999999999999999999999999999999999999999998 7999999998765 346
Q ss_pred cEEEeCCCeEEC
Q psy11815 130 YFNIDIGSGSLG 141 (141)
Q Consensus 130 ~F~Id~~tG~i~ 141 (141)
+|.|++.||.|+
T Consensus 162 ~F~Id~~tG~i~ 173 (213)
T 3qrb_A 162 MFTVNRDTGVIS 173 (213)
T ss_dssp SEEECTTTCEEE
T ss_pred eEEEECCCcEEE
Confidence 899999999983
No 7
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.97 E-value=5.3e-31 Score=185.49 Aligned_cols=131 Identities=21% Similarity=0.270 Sum_probs=117.6
Q ss_pred eEEEEecCCCCC--ceeEEEEeEECCCCCCCeEEEEEecCC----C------------------------CeEEEEEEEE
Q psy11815 7 YYAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGN----P------------------------ESYFNIDIGS 56 (141)
Q Consensus 7 y~~~V~E~~~~g--~~v~~v~a~D~D~~~n~~v~y~i~~~~----~------------------------~~y~l~v~a~ 56 (141)
..++|+||.++| +.|+++.|+|.|. .++|+|.++. + ..|.|+|.|+
T Consensus 6 ~~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CCEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence 468999999998 7899999988775 7899997431 1 8999999999
Q ss_pred ECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCC--CCCCeEEEEEEcCCCC----Cc
Q psy11815 57 DLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGNPE----SY 130 (141)
Q Consensus 57 d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~--~~~~~i~Y~i~~~~~~----~~ 130 (141)
|.+.+++++++.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|. +.|+.++|+|..+++. ++
T Consensus 82 D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~ 161 (218)
T 3k5r_A 82 DASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNM 161 (218)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCS
T ss_pred ECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCE
Confidence 99998899999999999999999999999999999999999999999999999999 6799999999876553 68
Q ss_pred EEEeCCCeEEC
Q psy11815 131 FNIDIGSGSLG 141 (141)
Q Consensus 131 F~Id~~tG~i~ 141 (141)
|.||+.||.|.
T Consensus 162 F~Id~~tG~i~ 172 (218)
T 3k5r_A 162 FYIDPEKGDIV 172 (218)
T ss_dssp EEECTTTCEEE
T ss_pred EEEECCccEEE
Confidence 99999999873
No 8
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.97 E-value=2.5e-30 Score=190.99 Aligned_cols=134 Identities=25% Similarity=0.273 Sum_probs=119.5
Q ss_pred CCCCe--eEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEE
Q psy11815 2 TLDPV--YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIG 55 (141)
Q Consensus 2 f~~~~--y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a 55 (141)
|.+.. |.+.|+|++++|+.|+++.|+|+|.+.| ++|+|..++. ..|.|+|.|
T Consensus 106 F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A 183 (316)
T 3ubf_A 106 FINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKA 183 (316)
T ss_dssp ECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEE
T ss_pred cCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccEEEECCcCCcccCcEEEEEEEE
Confidence 66665 8999999999999999999999999877 9999986532 789999999
Q ss_pred EECCC----CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEE-cCCCCCc
Q psy11815 56 SDLTG----GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESY 130 (141)
Q Consensus 56 ~d~~~----~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~-~~~~~~~ 130 (141)
+|.++ +++++++.++|.|.| |||+|.|.+..|.+.|.|+.++|+.|++|.|+|+| ++.++|+|. .++..++
T Consensus 184 ~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~ 259 (316)
T 3ubf_A 184 EDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGT 259 (316)
T ss_dssp EESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTT
T ss_pred EeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCe
Confidence 99985 457888999999999 99999999999999999999999999999999998 678999998 5677789
Q ss_pred EEEeCCCeEEC
Q psy11815 131 FNIDIGSGSLG 141 (141)
Q Consensus 131 F~Id~~tG~i~ 141 (141)
|.|++.||.|+
T Consensus 260 F~Id~~tG~i~ 270 (316)
T 3ubf_A 260 FNIGPTSGIVK 270 (316)
T ss_dssp EEECTTTCEEE
T ss_pred EEEECCeEEEE
Confidence 99999999984
No 9
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.97 E-value=2.3e-31 Score=186.08 Aligned_cols=130 Identities=25% Similarity=0.375 Sum_probs=112.8
Q ss_pred EEEEecCCCCC--ceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECC-C
Q psy11815 8 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLT-G 60 (141)
Q Consensus 8 ~~~V~E~~~~g--~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~-~ 60 (141)
++.|+||.+.+ +.|+++ |+|+|.| ++.++|+|.+++. ..|.|+|.|+|.+ .
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 83 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTG 83 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCC
Confidence 56899999865 478888 9999998 6789999987542 8999999999988 4
Q ss_pred CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCC---CCCCeEEEEEEcCCCCCcEEEeCCC
Q psy11815 61 GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNPESYFNIDIGS 137 (141)
Q Consensus 61 ~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~i~Y~i~~~~~~~~F~Id~~t 137 (141)
+++++++.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|. |.|+.++|+|..++. +|.|++.|
T Consensus 84 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~--~F~Id~~t 161 (207)
T 3lnd_A 84 RPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP--YFSVESET 161 (207)
T ss_dssp CCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGG--GEEECTTT
T ss_pred CccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCC--CEEEcCCC
Confidence 6788899999999999999999999999999999999999999999999998 778999999998754 89999999
Q ss_pred eEEC
Q psy11815 138 GSLG 141 (141)
Q Consensus 138 G~i~ 141 (141)
|.|+
T Consensus 162 G~i~ 165 (207)
T 3lnd_A 162 GIIK 165 (207)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 9883
No 10
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.97 E-value=7.8e-30 Score=177.84 Aligned_cols=128 Identities=21% Similarity=0.268 Sum_probs=115.6
Q ss_pred eEEEEecCCCCC--ceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECCC
Q psy11815 7 YYAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLTG 60 (141)
Q Consensus 7 y~~~V~E~~~~g--~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~~ 60 (141)
.+++|+||.+.| ..|+++. +|+|.+.+ +|+|.+++. ..|.|+|.|+|.+.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 80 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN 80 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTT
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCC
Confidence 578999999988 7888888 89998766 999987643 89999999999997
Q ss_pred C-CCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECC---CCCCCeEEEEEEcCCCCCcEEEeCC
Q psy11815 61 G-PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD---LDPDQRISYKISAGNPESYFNIDIG 136 (141)
Q Consensus 61 ~-~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D---~~~~~~i~Y~i~~~~~~~~F~Id~~ 136 (141)
+ ++++.+.|.|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+| .|.|+.++|+|..++. +|.|+ .
T Consensus 81 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~--~F~I~-~ 157 (203)
T 3ppe_A 81 NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNE--YFTVD-D 157 (203)
T ss_dssp TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTT--TEEEC-T
T ss_pred CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCC--cEEEe-C
Confidence 6 67888999999999999999999999999999999999999999999999 4779999999998764 89999 9
Q ss_pred CeEEC
Q psy11815 137 SGSLG 141 (141)
Q Consensus 137 tG~i~ 141 (141)
||.|+
T Consensus 158 tG~i~ 162 (203)
T 3ppe_A 158 SGVIF 162 (203)
T ss_dssp TSEEE
T ss_pred CeEEE
Confidence 99873
No 11
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.96 E-value=5.4e-30 Score=201.25 Aligned_cols=139 Identities=23% Similarity=0.329 Sum_probs=127.4
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC---CCCeEEEEEecCC------C-----------------------Ce
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGN------P-----------------------ES 48 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~---~n~~v~y~i~~~~------~-----------------------~~ 48 (141)
.|.+..|.++|+|++++|+.|+++.|+|+|.+ .|+.++|+|.++. . ..
T Consensus 107 ~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~ 186 (550)
T 3q2v_A 107 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT 186 (550)
T ss_dssp CBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSE
T ss_pred ccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcE
Confidence 48899999999999999999999999999998 7899999997642 1 78
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCC--eEEEEEEcCC
Q psy11815 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ--RISYKISAGN 126 (141)
Q Consensus 49 y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~--~i~Y~i~~~~ 126 (141)
|.|+|.|+|.++++++++++|.|+|.|+|||+|.|.+..|.+.|.|+ ++|+.|+++.|+|+|.+.++ .+.|+|.. +
T Consensus 187 y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~ 264 (550)
T 3q2v_A 187 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-D 264 (550)
T ss_dssp EEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-C
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-C
Confidence 99999999998888999999999999999999999999999999999 99999999999999998876 46799987 6
Q ss_pred CCCcEEEe----CCCeEEC
Q psy11815 127 PESYFNID----IGSGSLG 141 (141)
Q Consensus 127 ~~~~F~Id----~~tG~i~ 141 (141)
..+.|.|+ +.+|.|+
T Consensus 265 ~~~~F~i~~d~~~~tG~i~ 283 (550)
T 3q2v_A 265 PDQQFVVVTDPTTNDGILK 283 (550)
T ss_dssp SSCCEEEEECTTTCCEEEE
T ss_pred CCCcEEEEecCCCccEEEE
Confidence 67899998 7899873
No 12
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.96 E-value=4.2e-30 Score=201.73 Aligned_cols=139 Identities=26% Similarity=0.302 Sum_probs=127.5
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC---CCCeEEEEEecCC------C-----------------------Ce
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGN------P-----------------------ES 48 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~---~n~~v~y~i~~~~------~-----------------------~~ 48 (141)
.|.+..|.++|+|++++|+.|+++.|+|+|.+ .|+.++|+|.++. . ..
T Consensus 113 ~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 192 (546)
T 1l3w_A 113 KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPE 192 (546)
T ss_dssp EESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCE
T ss_pred EecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCce
Confidence 37889999999999999999999999999998 6899999998654 1 78
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECC--CCCCCeEEEEEEcCC
Q psy11815 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGN 126 (141)
Q Consensus 49 y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D--~~~~~~i~Y~i~~~~ 126 (141)
|.|+|.|+|.++++++++++|.|+|.|+|||+|.|.+..|.+.|.|+ ++|+.|++|.|+|+| .+.|+.++|+|.. +
T Consensus 193 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~ 270 (546)
T 1l3w_A 193 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-N 270 (546)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-C
T ss_pred EEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-C
Confidence 99999999999888999999999999999999999999999999999 999999999999999 6789999999987 6
Q ss_pred CCCcEEEe----CCCeEEC
Q psy11815 127 PESYFNID----IGSGSLG 141 (141)
Q Consensus 127 ~~~~F~Id----~~tG~i~ 141 (141)
..+.|.|+ ..+|.|+
T Consensus 271 ~~~~F~I~~d~~~~~G~i~ 289 (546)
T 1l3w_A 271 EGGFFNITTDPESNQGILT 289 (546)
T ss_dssp TTSCEEEEECTTTCCEEEE
T ss_pred CCceEEEEecCCCCeEEEE
Confidence 67899996 3679873
No 13
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.96 E-value=1.6e-29 Score=198.90 Aligned_cols=140 Identities=24% Similarity=0.312 Sum_probs=126.6
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC--CCCeEEEEEecCC------C-----------------------CeE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD--PDQRISYKISAGN------P-----------------------ESY 49 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~--~n~~v~y~i~~~~------~-----------------------~~y 49 (141)
.|.+..|.++|+||+++|+.|+++.|+|+|.+ .|+.++|+|.++. . ..|
T Consensus 107 ~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 186 (559)
T 3q2w_A 107 EFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQY 186 (559)
T ss_dssp EESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEE
T ss_pred ccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEE
Confidence 38899999999999999999999999999986 6999999997532 1 789
Q ss_pred EEEEEEEECCC---CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCC--CCeEEEEEEc
Q psy11815 50 FNIDIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKISA 124 (141)
Q Consensus 50 ~l~v~a~d~~~---~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~--~~~i~Y~i~~ 124 (141)
.|+|+|+|.++ ++++++++|.|+|.|+|||+|.|.+..|.+.|.|+. +|+.|+++.|+|+|.+. |+.+.|+|..
T Consensus 187 ~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~ 265 (559)
T 3q2w_A 187 TLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISG 265 (559)
T ss_dssp EEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEE
T ss_pred EEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEec
Confidence 99999999864 458999999999999999999999999999999997 89999999999999976 6689999999
Q ss_pred CCCCCcEEE----eCCCeEEC
Q psy11815 125 GNPESYFNI----DIGSGSLG 141 (141)
Q Consensus 125 ~~~~~~F~I----d~~tG~i~ 141 (141)
++..+.|.| ++.+|.|+
T Consensus 266 g~~~~~F~I~~~~~~~~G~i~ 286 (559)
T 3q2w_A 266 GDPTGRFAILTDPNSNDGLVT 286 (559)
T ss_dssp SCTTCCEEEEECTTTCEEEEE
T ss_pred CCCCCceEEEecCCCCcEEEE
Confidence 888899999 57889873
No 14
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.96 E-value=3.5e-29 Score=205.11 Aligned_cols=139 Identities=26% Similarity=0.301 Sum_probs=127.4
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC---CCCeEEEEEecCC------C-----------------------Ce
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGN------P-----------------------ES 48 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~---~n~~v~y~i~~~~------~-----------------------~~ 48 (141)
.|.+..|.++|+|++++|+.|++|.|+|+|.+ .|+.++|+|.++. . ..
T Consensus 262 ~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~ 341 (880)
T 1q55_A 262 KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPE 341 (880)
T ss_dssp EESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCE
T ss_pred CccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcce
Confidence 37889999999999999999999999999998 7899999998654 1 78
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECC--CCCCCeEEEEEEcCC
Q psy11815 49 YFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGN 126 (141)
Q Consensus 49 y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D--~~~~~~i~Y~i~~~~ 126 (141)
|.|+|.|+|.++++++++++|.|+|.|+|||+|.|.+..|.+.|.|+ ++|+.|++|.|+|+| .+.|+.++|+|.. +
T Consensus 342 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~ 419 (880)
T 1q55_A 342 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-N 419 (880)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-C
T ss_pred eEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-C
Confidence 99999999999888999999999999999999999999999999999 999999999999999 6779999999987 6
Q ss_pred CCCcEEEe--C--CCeEEC
Q psy11815 127 PESYFNID--I--GSGSLG 141 (141)
Q Consensus 127 ~~~~F~Id--~--~tG~i~ 141 (141)
..++|.|+ + .+|.|+
T Consensus 420 ~~~~F~I~~d~~~~~G~i~ 438 (880)
T 1q55_A 420 EGGFFNITTDPESNQGILT 438 (880)
T ss_dssp TTSCEEEEECTTTCCEEEE
T ss_pred CCceEEEEecCCCceEEEe
Confidence 67899995 3 679873
No 15
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.96 E-value=4.8e-28 Score=184.76 Aligned_cols=132 Identities=29% Similarity=0.344 Sum_probs=117.8
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEec-CCC------------------------C---eEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA-GNP------------------------E---SYFNI 52 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~-~~~------------------------~---~y~l~ 52 (141)
.|.++.|.+.|+||+++|+.|++|.|+|+| |+.++|+|.. ++. . .|.|+
T Consensus 218 ~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~ 294 (419)
T 3ubh_A 218 QFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLI 294 (419)
T ss_dssp EESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEE
T ss_pred ceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEE
Confidence 378899999999999999999999999987 7889999973 322 2 69999
Q ss_pred EEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEE-EEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcE
Q psy11815 53 DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYA-QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYF 131 (141)
Q Consensus 53 v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~-~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F 131 (141)
|.|+|.+ ++++++++|.|+|.|+|||+|.|..+.|.. .|.|+.++|+.|++|.|+|+|.|.|+.++|+|.. ++|
T Consensus 295 V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~----~~F 369 (419)
T 3ubh_A 295 VTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD----DHF 369 (419)
T ss_dssp EEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC----TTE
T ss_pred EEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC----CcE
Confidence 9999754 358899999999999999999999999987 7999999999999999999999999999999953 479
Q ss_pred EEeCCCeEEC
Q psy11815 132 NIDIGSGSLG 141 (141)
Q Consensus 132 ~Id~~tG~i~ 141 (141)
.|++ +|.|.
T Consensus 370 ~Id~-~G~i~ 378 (419)
T 3ubh_A 370 AVDS-NGIIV 378 (419)
T ss_dssp EECT-TCEEE
T ss_pred EECC-CeEEE
Confidence 9998 89873
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.95 E-value=3.3e-28 Score=185.68 Aligned_cols=134 Identities=25% Similarity=0.273 Sum_probs=119.5
Q ss_pred CCCCe--eEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEE
Q psy11815 2 TLDPV--YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIG 55 (141)
Q Consensus 2 f~~~~--y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a 55 (141)
|.+.. |.+.|+|++++|+.|+++.|+|+|.+.| ++|+|..+.. ..|.|+|.|
T Consensus 111 F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A 188 (419)
T 3ubh_A 111 FINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKA 188 (419)
T ss_dssp ECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEE
T ss_pred ccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCceEEEEecccccccccEEEEEEEE
Confidence 56665 8999999999999999999999999876 8999986542 679999999
Q ss_pred EECCCC----CCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEE-cCCCCCc
Q psy11815 56 SDLTGG----PDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKIS-AGNPESY 130 (141)
Q Consensus 56 ~d~~~~----~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~-~~~~~~~ 130 (141)
+|.+++ ++++++.+.|.|.| |||+|.|.+..|.+.|.|+.++|+.|++|.|+|+| |+.++|+|. .++..++
T Consensus 189 ~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~ 264 (419)
T 3ubh_A 189 EDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGT 264 (419)
T ss_dssp EEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSS
T ss_pred EECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCc
Confidence 998753 56788899999999 99999999999999999999999999999999987 778999997 4666789
Q ss_pred EEEeCCCeEEC
Q psy11815 131 FNIDIGSGSLG 141 (141)
Q Consensus 131 F~Id~~tG~i~ 141 (141)
|.|++.||.|+
T Consensus 265 F~I~~~tG~i~ 275 (419)
T 3ubh_A 265 FNIGPTSGIVK 275 (419)
T ss_dssp EEECTTTCEEE
T ss_pred EEEECCCCEEE
Confidence 99999999984
No 17
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.95 E-value=3.5e-28 Score=190.83 Aligned_cols=138 Identities=22% Similarity=0.266 Sum_probs=124.7
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECC--CCCCCeEEEEEecCC--------------C-------------CeEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGN--------------P-------------ESYFN 51 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D--~~~n~~v~y~i~~~~--------------~-------------~~y~l 51 (141)
.|.+..|.+.|+|| ++|+.|++|.|+|+| .+.|+.++|+|.+.. + ..|.|
T Consensus 226 ~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l 304 (546)
T 1l3w_A 226 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL 304 (546)
T ss_dssp CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred ccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEE
Confidence 48889999999999 999999999999999 688999999997510 0 78999
Q ss_pred EEEEEECCC---CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCC
Q psy11815 52 IDIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128 (141)
Q Consensus 52 ~v~a~d~~~---~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~ 128 (141)
+|.|+|.+. ++++++++|.|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..+ ..
T Consensus 305 ~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~-~~ 382 (546)
T 1l3w_A 305 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGND-PA 382 (546)
T ss_dssp EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCC-SS
T ss_pred EEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCC-CC
Confidence 999999873 567899999999999999 9999999999999999999999999999999999999999999764 45
Q ss_pred CcEEEeCCCeEEC
Q psy11815 129 SYFNIDIGSGSLG 141 (141)
Q Consensus 129 ~~F~Id~~tG~i~ 141 (141)
++|.|++.+|.|+
T Consensus 383 ~~F~Id~~tG~i~ 395 (546)
T 1l3w_A 383 RWLTVNKDNGIVT 395 (546)
T ss_dssp CCCEEETTTTEEE
T ss_pred CcEEEeCCcEEEE
Confidence 7999999999873
No 18
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.95 E-value=2.6e-27 Score=186.01 Aligned_cols=137 Identities=19% Similarity=0.212 Sum_probs=123.2
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCCCC--eEEEEEecCCC---------------------------CeEEEE
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQ--RISYKISAGNP---------------------------ESYFNI 52 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~--~v~y~i~~~~~---------------------------~~y~l~ 52 (141)
|.+..|.+.|+|| ++|+.|++|.|+|+|.+.|+ .+.|+|.+... ..|.|+
T Consensus 221 F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~ 299 (550)
T 3q2v_A 221 FNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILH 299 (550)
T ss_dssp ESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEE
T ss_pred EecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEE
Confidence 7889999999999 89999999999999998776 46699975211 789999
Q ss_pred EEEEECCC---CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCCC
Q psy11815 53 DIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPES 129 (141)
Q Consensus 53 v~a~d~~~---~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~ 129 (141)
|.|+|.+. +.++++++|.|+|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.|.|+.++|+|.. +..+
T Consensus 300 V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~-~~~~ 377 (550)
T 3q2v_A 300 VRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR-DTAN 377 (550)
T ss_dssp EEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE-CTTC
T ss_pred EEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec-CCCC
Confidence 99999873 557899999999999999 999999999999999999999999999999999999999999975 4557
Q ss_pred cEEEeCCCeEEC
Q psy11815 130 YFNIDIGSGSLG 141 (141)
Q Consensus 130 ~F~Id~~tG~i~ 141 (141)
+|.|++.||.|+
T Consensus 378 ~f~id~~tG~i~ 389 (550)
T 3q2v_A 378 WLEINPETGAIF 389 (550)
T ss_dssp CEEECTTTCEEE
T ss_pred cEEEeCCCcEEE
Confidence 899999999983
No 19
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.95 E-value=4.4e-27 Score=185.05 Aligned_cols=137 Identities=22% Similarity=0.279 Sum_probs=123.8
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCC--CCeEEEEEecCCC----------------------------CeEEE
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRISYKISAGNP----------------------------ESYFN 51 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~--n~~v~y~i~~~~~----------------------------~~y~l 51 (141)
|.+..|.+.|+|++ +|+.|+++.|+|+|.+. |+.+.|+|.+++. ..|.|
T Consensus 223 f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l 301 (559)
T 3q2w_A 223 FTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVL 301 (559)
T ss_dssp ESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEE
T ss_pred cccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEE
Confidence 78899999999997 79999999999999965 6789999987652 78999
Q ss_pred EEEEEECC------CCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcC
Q psy11815 52 IDIGSDLT------GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125 (141)
Q Consensus 52 ~v~a~d~~------~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~ 125 (141)
+|.|+|.+ .++++++++|.|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+|.+.|+.++|+|...
T Consensus 302 ~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~ 380 (559)
T 3q2w_A 302 TVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSD 380 (559)
T ss_dssp EEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEEC
T ss_pred EEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccC
Confidence 99999974 2568899999999999999 6999999999999999999999999999999999999999999864
Q ss_pred CCCCcEEEeCCCeEEC
Q psy11815 126 NPESYFNIDIGSGSLG 141 (141)
Q Consensus 126 ~~~~~F~Id~~tG~i~ 141 (141)
..++|.|++.||.|+
T Consensus 381 -~~~~f~Id~~tG~i~ 395 (559)
T 3q2w_A 381 -PANWLKIDPVNGQIT 395 (559)
T ss_dssp -TTCCEEECTTTCEEE
T ss_pred -CccceEecCCceEEE
Confidence 457999999999873
No 20
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=6.3e-27 Score=166.99 Aligned_cols=136 Identities=23% Similarity=0.217 Sum_probs=110.6
Q ss_pred CeeEEEEecCCCCCceeEEEEeEECC-CCCCCeEEEEEecCCC--------------------------CeEE---EEEE
Q psy11815 5 PVYYAQIVENQSGILPIVQLAASDGD-LDPDQRISYKISAGNP--------------------------ESYF---NIDI 54 (141)
Q Consensus 5 ~~y~~~V~E~~~~g~~v~~v~a~D~D-~~~n~~v~y~i~~~~~--------------------------~~y~---l~v~ 54 (141)
+.|.+.|+|++++|+.|..+.+.|.+ .++|+.+.|+|.+... ..|. +.+.
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~ 99 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ 99 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence 56889999999999998876655554 4889999999986542 2343 4444
Q ss_pred EEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEE-----EEEEECCCCCCCeEEEEEEcCCCC-
Q psy11815 55 GSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ-----LAASDGDLDPDQRISYKISAGNPE- 128 (141)
Q Consensus 55 a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~-----v~a~D~D~~~~~~i~Y~i~~~~~~- 128 (141)
|.+.. .+....+.|.|.|.|+|||+|.|.+..|.+.|.|+.++|+.|++ |.|+|+|.|.|+.|+|+|..++..
T Consensus 100 ~~~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~ 178 (242)
T 4apx_B 100 CVNKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDP 178 (242)
T ss_dssp EEETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTST
T ss_pred eECCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCc
Confidence 55544 23567788999999999999999999999999999999999976 789999999999999999977653
Q ss_pred ---CcEEEeC-CCeEEC
Q psy11815 129 ---SYFNIDI-GSGSLG 141 (141)
Q Consensus 129 ---~~F~Id~-~tG~i~ 141 (141)
..|.||+ .||.|+
T Consensus 179 ~~~~~F~Id~~~tG~i~ 195 (242)
T 4apx_B 179 TSNDTFEIPLMLTGNVV 195 (242)
T ss_dssp THHHHEECSSTTTCCEE
T ss_pred ccccceEEcCCCceEEE
Confidence 4699985 599874
No 21
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.94 E-value=4.9e-28 Score=179.19 Aligned_cols=131 Identities=23% Similarity=0.310 Sum_probs=117.1
Q ss_pred eEEEEecC--CCCCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECCC
Q psy11815 7 YYAQIVEN--QSGILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLTG 60 (141)
Q Consensus 7 y~~~V~E~--~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~~ 60 (141)
+++.|.|| .+.|+.|+++. +|+|.+ ++.++|+|.++.. ..|.|+|.|+|.+.
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 82 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCC
Confidence 56789999 88899999985 899987 7899999986532 78999999999875
Q ss_pred -CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCC---CCCCeEEEEEEcCCCCCcEEEeCC
Q psy11815 61 -GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNPESYFNIDIG 136 (141)
Q Consensus 61 -~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~i~Y~i~~~~~~~~F~Id~~ 136 (141)
+++++.+++.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|..++ .+|.|++.
T Consensus 83 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~ 160 (322)
T 2a62_A 83 NKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPE 160 (322)
T ss_dssp CSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTT
T ss_pred CCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecC
Confidence 4578889999999999999999999999999999999999999999999996 77899999999875 48999999
Q ss_pred CeEEC
Q psy11815 137 SGSLG 141 (141)
Q Consensus 137 tG~i~ 141 (141)
||.|.
T Consensus 161 tG~i~ 165 (322)
T 2a62_A 161 TAIIK 165 (322)
T ss_dssp TCCEE
T ss_pred CCEEE
Confidence 99873
No 22
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.94 E-value=3.6e-27 Score=193.23 Aligned_cols=138 Identities=22% Similarity=0.271 Sum_probs=124.8
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECC--CCCCCeEEEEEecCC--------------C-------------CeEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGD--LDPDQRISYKISAGN--------------P-------------ESYFN 51 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D--~~~n~~v~y~i~~~~--------------~-------------~~y~l 51 (141)
.|.+..|.+.|+|| ++|+.|++|.|+|+| .+.|+.++|+|.+.. + ..|.|
T Consensus 375 ~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l 453 (880)
T 1q55_A 375 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL 453 (880)
T ss_dssp CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred CccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEE
Confidence 48889999999999 999999999999999 678999999997511 0 78999
Q ss_pred EEEEEECCC---CCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCC
Q psy11815 52 IDIGSDLTG---GPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE 128 (141)
Q Consensus 52 ~v~a~d~~~---~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~ 128 (141)
+|.|+|.+. ++++++++|+|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+|.+.|+.++|+|.. +..
T Consensus 454 ~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~-~~~ 531 (880)
T 1q55_A 454 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPA 531 (880)
T ss_dssp EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSS
T ss_pred EEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC-CCC
Confidence 999999873 467899999999999999 999999999999999999999999999999999999999999976 345
Q ss_pred CcEEEeCCCeEEC
Q psy11815 129 SYFNIDIGSGSLG 141 (141)
Q Consensus 129 ~~F~Id~~tG~i~ 141 (141)
++|.||+.||.|+
T Consensus 532 ~~F~Id~~tG~I~ 544 (880)
T 1q55_A 532 RWLTVNKDNGIVT 544 (880)
T ss_dssp CCCEEETTTTEEE
T ss_pred CCEEEeCCccEEE
Confidence 7999999999873
No 23
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.93 E-value=2.2e-25 Score=164.49 Aligned_cols=92 Identities=26% Similarity=0.310 Sum_probs=78.9
Q ss_pred eEEEEEEEEECCCC-CCeEEEEEEEEEEeCCCCCCccCCCc--eEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEc
Q psy11815 48 SYFNIDIGSDLTGG-PDQVYLIVYIQVQNVNDNVPMTLDPV--YYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISA 124 (141)
Q Consensus 48 ~y~l~v~a~d~~~~-~~~~~~~v~i~V~d~Nd~~P~f~~~~--~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~ 124 (141)
.|.|+|.|.|++.| ++++.++|.|+|.|+|||+|.|.+.. |.+.|.|+.++|+.|+++.|+|+|.|.| ++|+|..
T Consensus 70 ~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~ 147 (316)
T 3ubf_A 70 DFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVR 147 (316)
T ss_dssp EEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEE
T ss_pred EEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEe
Confidence 57888888888765 57899999999999999999999886 8999999999999999999999999876 9999997
Q ss_pred CCCCCcEEEeCCCeEEC
Q psy11815 125 GNPESYFNIDIGSGSLG 141 (141)
Q Consensus 125 ~~~~~~F~Id~~tG~i~ 141 (141)
++..++|.|++.||.|+
T Consensus 148 ~~~~~~F~Id~~tG~i~ 164 (316)
T 3ubf_A 148 DRTGGRFEVDERSGVVR 164 (316)
T ss_dssp EESSSCEEECTTTCEEE
T ss_pred CCCCCEEEEECCccEEE
Confidence 77778999999999984
No 24
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=130.69 Aligned_cols=81 Identities=28% Similarity=0.346 Sum_probs=76.7
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--------------------------CeEEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--------------------------ESYFNIDI 54 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--------------------------~~y~l~v~ 54 (141)
.|.+..|.++|+|++++|+.|+++.|+|+|.|.|+.++|+|.++.. ..|.|+|.
T Consensus 13 ~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~ 92 (119)
T 2yst_A 13 RFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVM 92 (119)
T ss_dssp CCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEE
T ss_pred CcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCcccCCEEEEEEE
Confidence 4899999999999999999999999999999999999999998642 79999999
Q ss_pred EEECCCCCCeEEEEEEEEEEeCCCCCC
Q psy11815 55 GSDLTGGPDQVYLIVYIQVQNVNDNVP 81 (141)
Q Consensus 55 a~d~~~~~~~~~~~v~i~V~d~Nd~~P 81 (141)
|+|.|.|+++++++|.|+|.|+|||+|
T Consensus 93 A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 93 ARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp ECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 999999999999999999999999998
No 25
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.83 E-value=4.4e-21 Score=137.10 Aligned_cols=83 Identities=16% Similarity=0.075 Sum_probs=75.9
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----------------------CeEEEEEEEEE-
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----------------------ESYFNIDIGSD- 57 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----------------------~~y~l~v~a~d- 57 (141)
|.+..|.+.|+||+++|+.|+++.|+|+|.|.|+.++|+|.+++. ..|.|+|.|+|
T Consensus 139 F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~ 218 (246)
T 2x2u_A 139 FPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVH 218 (246)
T ss_dssp SCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC
T ss_pred cCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEec
Confidence 899999999999999999999999999999999999999998742 79999999998
Q ss_pred CCCCCCeEEEEEEEEEEeCCCCCCccC
Q psy11815 58 LTGGPDQVYLIVYIQVQNVNDNVPMTL 84 (141)
Q Consensus 58 ~~~~~~~~~~~v~i~V~d~Nd~~P~f~ 84 (141)
.++|+++++++|.|+|.|+|||+|.|.
T Consensus 219 dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 219 AGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp ---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred CCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 566889999999999999999999995
No 26
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-21 Score=124.93 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=64.8
Q ss_pred EEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCC---CCCcEEEeCCCeEEC
Q psy11815 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN---PESYFNIDIGSGSLG 141 (141)
Q Consensus 71 i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~---~~~~F~Id~~tG~i~ 141 (141)
|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.|+|+|.... ..++|.|++.||.|+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~ 75 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 75 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEE
Confidence 46899999999999999999999999999999999999999999999999997632 346899999999984
No 27
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=6.3e-21 Score=123.01 Aligned_cols=85 Identities=21% Similarity=0.210 Sum_probs=76.9
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCC------C----------------------CeEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN------P----------------------ESYFNI 52 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~------~----------------------~~y~l~ 52 (141)
.|..+.|.+.+.|++++|+.|++|. +|+|.+.|+.|+|+|.++. . ..|.|+
T Consensus 11 ~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~ 89 (123)
T 2yqg_A 11 AWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLT 89 (123)
T ss_dssp SSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBSEEEEE
T ss_pred ccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCceEEEE
Confidence 3777889999999999999999999 5999999999999998752 1 899999
Q ss_pred EEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCC
Q psy11815 53 DIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDP 86 (141)
Q Consensus 53 v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~ 86 (141)
|.|+|.+.|++++++.|.|+|.|+|||+|.|.++
T Consensus 90 V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 90 GYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred EEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 9999999999999999999999999999999763
No 28
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=7.7e-21 Score=121.90 Aligned_cols=71 Identities=32% Similarity=0.393 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCC--CCcEEEeCCCeEEC
Q psy11815 71 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGSLG 141 (141)
Q Consensus 71 i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~--~~~F~Id~~tG~i~ 141 (141)
++|.|+|||+|.|.+..|.+.|.|+.++|+.|+++.|+|+|.|.|+.|+|+|..+.. ..+|.|++.||.|+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~ 74 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLS 74 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEE
Confidence 468999999999999999999999999999999999999999999999999987653 36899999999984
No 29
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.79 E-value=3.4e-19 Score=124.96 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=69.0
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC---CCCCeEEEEEecCCC-----------------------CeEEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNP-----------------------ESYFNIDI 54 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~---~~n~~v~y~i~~~~~-----------------------~~y~l~v~ 54 (141)
.|.++.|.++|+|++++|+.|++|.|+|+|. |.|+.++|+|.++.+ ..|.|+|.
T Consensus 106 ~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~ 185 (215)
T 2a4e_A 106 EFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQ 185 (215)
T ss_dssp EESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTTTEEECTTTCEEEECSSCCCSSSCSEEEEEEE
T ss_pred CccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCCcEEEeCCccEEEEcccCCCcccCCEEEEEEE
Confidence 3788899999999999999999999999997 789999999988754 68999999
Q ss_pred EEECCCC--CCeEEEEEEEEEEeCCCCCCc
Q psy11815 55 GSDLTGG--PDQVYLIVYIQVQNVNDNVPM 82 (141)
Q Consensus 55 a~d~~~~--~~~~~~~v~i~V~d~Nd~~P~ 82 (141)
|+|.|.| +++++++|+|+|.|+|||+|+
T Consensus 186 A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 186 AKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 9999875 689999999999999999995
No 30
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.4e-18 Score=110.51 Aligned_cols=75 Identities=25% Similarity=0.243 Sum_probs=68.8
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC---------------------------CeEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---------------------------ESYFNID 53 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~---------------------------~~y~l~v 53 (141)
.|.++.|.++|+||+++|+.|+++.|+|+|.|.|+.++|+|.++.+ ..|.|+|
T Consensus 13 ~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V 92 (114)
T 2ee0_A 13 VFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTV 92 (114)
T ss_dssp CCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCCTTTCSEEEEEE
T ss_pred CcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCCcccCcEEEEEE
Confidence 4899999999999999999999999999999999999999986321 7999999
Q ss_pred EEEECCCCCCeEEEEEEEEEEeCC
Q psy11815 54 IGSDLTGGPDQVYLIVYIQVQNVN 77 (141)
Q Consensus 54 ~a~d~~~~~~~~~~~v~i~V~d~N 77 (141)
.|+|.+.++ ++++|.|+|+|+|
T Consensus 93 ~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 93 LASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp EEESSSSSC--EEEEEEEEEECCC
T ss_pred EEEECCCCc--eEEEEEEEEEECC
Confidence 999999865 7889999999997
No 31
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.77 E-value=3.3e-19 Score=112.79 Aligned_cols=75 Identities=21% Similarity=0.371 Sum_probs=57.4
Q ss_pred eeEEEEecCCCCCce--eEEEEeEECCCCCCCeEEEEEecCC----C------------------------CeEEEEEEE
Q psy11815 6 VYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAGN----P------------------------ESYFNIDIG 55 (141)
Q Consensus 6 ~y~~~V~E~~~~g~~--v~~v~a~D~D~~~n~~v~y~i~~~~----~------------------------~~y~l~v~a 55 (141)
.|.++|+||+++|+. |+++ |.|.+.|+.++|+|.++. . ..|.|+|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 488999999999996 4444 778888999999999741 1 799999999
Q ss_pred EECCCCCCeEEEEEEEEEEeCCCCCCcc
Q psy11815 56 SDLTGGPDQVYLIVYIQVQNVNDNVPMT 83 (141)
Q Consensus 56 ~d~~~~~~~~~~~v~i~V~d~Nd~~P~f 83 (141)
+|.+.|++++++.|.|+|+|+|||+|.|
T Consensus 83 ~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 83 VDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ECTTSCBCSCCEEEEEEEC---------
T ss_pred EECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999999999999999999987
No 32
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.76 E-value=4.6e-18 Score=118.76 Aligned_cols=80 Identities=21% Similarity=0.243 Sum_probs=74.1
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC----------------------CeEEEEEEEEEC
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP----------------------ESYFNIDIGSDL 58 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~----------------------~~y~l~v~a~d~ 58 (141)
.|.+..|.+.|+|++++|+.|+++.|+|+|.+.|+.++|+|..+.+ ..|.|+|.|+|.
T Consensus 108 ~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 187 (210)
T 3mvs_A 108 TFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQ 187 (210)
T ss_dssp EECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEEC
T ss_pred cCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEEC
Confidence 3788899999999999999999999999999999999999987664 899999999999
Q ss_pred CC-CCCeEEEEEEEEEEeCCCCC
Q psy11815 59 TG-GPDQVYLIVYIQVQNVNDNV 80 (141)
Q Consensus 59 ~~-~~~~~~~~v~i~V~d~Nd~~ 80 (141)
++ +++++++++.|+|.|+||||
T Consensus 188 g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 188 DKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp CSSSCCEEEEEEEEEEECCCCCC
T ss_pred CCCCCCEEEEEEEEEEEccCCCC
Confidence 84 68999999999999999986
No 33
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=9.5e-18 Score=108.32 Aligned_cols=82 Identities=17% Similarity=0.092 Sum_probs=67.0
Q ss_pred CeeEEEEecCCCCCceeEEEEeEECCCCCCCeE---EEEEecCCC----------------------------CeEEEEE
Q psy11815 5 PVYYAQIVENQSGILPIVQLAASDGDLDPDQRI---SYKISAGNP----------------------------ESYFNID 53 (141)
Q Consensus 5 ~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v---~y~i~~~~~----------------------------~~y~l~v 53 (141)
..|..+|+|++++|+.|++| |+|.|.+. +.+ +|+|.+++. ..|.|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 45788999999999999999 99988753 334 899986543 4688999
Q ss_pred EEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEE
Q psy11815 54 IGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQ 91 (141)
Q Consensus 54 ~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~ 91 (141)
.|.+.. ++ ..++|.|+|+|+|||+|.|.++.|.++
T Consensus 89 ~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999743 33 478999999999999999999988764
No 34
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.61 E-value=1.9e-15 Score=105.63 Aligned_cols=75 Identities=20% Similarity=0.256 Sum_probs=68.9
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCCC---CCCeEEEEEecCC------C-----------------------Ce
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDLD---PDQRISYKISAGN------P-----------------------ES 48 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~---~n~~v~y~i~~~~------~-----------------------~~ 48 (141)
.|.+..|.+.|+||+++|+.|++|.|+|+|.+ .|+.++|+|.++. . ..
T Consensus 107 ~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 186 (213)
T 3qrb_A 107 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT 186 (213)
T ss_dssp EESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCE
T ss_pred ccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCce
Confidence 37889999999999999999999999999998 8999999997643 1 78
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11815 49 YFNIDIGSDLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 49 y~l~v~a~d~~~~~~~~~~~v~i~V~d 75 (141)
|.|+|.|+|.|.++++++++|.|+|.|
T Consensus 187 y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 187 YTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 999999999999999999999999987
No 35
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.59 E-value=8.6e-15 Score=101.65 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=68.3
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC---CCCCeEEEEEecCCC----------------------CeEEEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNP----------------------ESYFNIDIG 55 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~---~~n~~v~y~i~~~~~----------------------~~y~l~v~a 55 (141)
.|.+..|.+.|+||+++|+.|++|.|+|+|. +.|+.++|+|.++++ ..|.|+|.|
T Consensus 103 ~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A 182 (203)
T 3ppe_A 103 IFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNEYFTVDDSGVIFTARADLDRESQSAYEIIVKA 182 (203)
T ss_dssp EESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTTTEEECTTSEEEESCSCCCTTTCSEEEEEEEE
T ss_pred CccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCCcEEEeCCeEEEECCcCCCcccCCEEEEEEEE
Confidence 3788999999999999999999999999994 789999999987653 789999999
Q ss_pred EEC-CCCCCeEEEEEEEEEEe
Q psy11815 56 SDL-TGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 56 ~d~-~~~~~~~~~~v~i~V~d 75 (141)
+|. |.|+++++++|.|+|.|
T Consensus 183 ~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 183 KDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EETTCCCCSSSEEEEEEEEEC
T ss_pred EeCCCCCCCeEEEEEEEEEEC
Confidence 998 66789999999999987
No 36
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.59 E-value=4.4e-15 Score=103.37 Aligned_cols=75 Identities=25% Similarity=0.291 Sum_probs=68.9
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC---CCCCeEEEEEecCCC-----------------------CeEEEEEE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL---DPDQRISYKISAGNP-----------------------ESYFNIDI 54 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~---~~n~~v~y~i~~~~~-----------------------~~y~l~v~ 54 (141)
.|.+..|.+.|+||+++|+.|++|.|+|+|. |.|+.++|+|.++.+ ..|.|+|.
T Consensus 105 ~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~ 184 (207)
T 3lnd_A 105 IFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQ 184 (207)
T ss_dssp EESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGGGEEECTTTCEEEECCSSCCC--CCEEEEEEE
T ss_pred ccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCCcEEEECcccCCcccCCEEEEEEE
Confidence 3788999999999999999999999999998 889999999988754 78999999
Q ss_pred EEECCCC--CCeEEEEEEEEEEe
Q psy11815 55 GSDLTGG--PDQVYLIVYIQVQN 75 (141)
Q Consensus 55 a~d~~~~--~~~~~~~v~i~V~d 75 (141)
|+|.+.+ +++++++|+|+|.|
T Consensus 185 A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 185 AKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEECCCCCCCcEeEEEEEEEEeC
Confidence 9999876 79999999999987
No 37
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.59 E-value=4.2e-15 Score=92.15 Aligned_cols=68 Identities=24% Similarity=0.202 Sum_probs=60.9
Q ss_pred eeEEEEecCCC--CCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECC
Q psy11815 6 VYYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLT 59 (141)
Q Consensus 6 ~y~~~V~E~~~--~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~ 59 (141)
.+.++|+||++ .|+.|++|. +|+|.| |++++|+|.++.. ..|.|+|.|+|.|
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G 82 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRR 82 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred ccEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECC
Confidence 36889999976 689999999 999999 9999999987542 8999999999999
Q ss_pred -CCCCeEEEEEEEEEEe
Q psy11815 60 -GGPDQVYLIVYIQVQN 75 (141)
Q Consensus 60 -~~~~~~~~~v~i~V~d 75 (141)
+|++++.+.|.|+|.|
T Consensus 83 ~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 83 TGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TCCBSSCCEEEEEEEEC
T ss_pred CCCCcceeEEEEEEEeC
Confidence 5889999999999987
No 38
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.56 E-value=7.1e-15 Score=90.95 Aligned_cols=67 Identities=21% Similarity=0.211 Sum_probs=58.3
Q ss_pred eEEEEecCCC--CCceeEEEEeEECCCCCCCeEEEEEecCCC------------------------CeEEEEEEEEECCC
Q psy11815 7 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNP------------------------ESYFNIDIGSDLTG 60 (141)
Q Consensus 7 y~~~V~E~~~--~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------------------------~~y~l~v~a~d~~~ 60 (141)
+.++|+||.+ .|+.|+++. +|+|.| |++|+|+|.++.. ..|.|+|.|+|.|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 7889999995 799999997 999999 9999999987532 89999999999997
Q ss_pred -CCCeEEEEEEEEEEe
Q psy11815 61 -GPDQVYLIVYIQVQN 75 (141)
Q Consensus 61 -~~~~~~~~v~i~V~d 75 (141)
|++++++.|.|+|+|
T Consensus 83 ~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 83 NKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CCBSSCCEEEEEEECC
T ss_pred CCCcceeEEEEEEEEC
Confidence 789999999999986
No 39
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.55 E-value=4.1e-15 Score=104.16 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC--CCCCeEEEEEecCC----C-------------------------CeE
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGN----P-------------------------ESY 49 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~--~~n~~v~y~i~~~~----~-------------------------~~y 49 (141)
.|.+..|.+.|+||+++|+.|++|.|+|+|. +.|+.++|+|.+++ . ..|
T Consensus 107 ~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 186 (215)
T 2qvi_A 107 EFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQY 186 (215)
T ss_dssp BCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEE
T ss_pred cccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeE
Confidence 4888999999999999999999999999999 78999999998764 1 789
Q ss_pred EEEEEEEECCCC---CCeEEEEEEEEEEe
Q psy11815 50 FNIDIGSDLTGG---PDQVYLIVYIQVQN 75 (141)
Q Consensus 50 ~l~v~a~d~~~~---~~~~~~~v~i~V~d 75 (141)
.|+|.|+|.+++ +++++++|.|+|.|
T Consensus 187 ~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 187 TLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 999999999887 78999999999986
No 40
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.54 E-value=2.5e-14 Score=101.81 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=66.9
Q ss_pred CCCCCeeEEEEecCCCCCceeEE-----EEeEECCCCCCCeEEEEEecCCC-----------------------------
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQ-----LAASDGDLDPDQRISYKISAGNP----------------------------- 46 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~-----v~a~D~D~~~n~~v~y~i~~~~~----------------------------- 46 (141)
.|.+..|.+.|+||+++|+.|.+ +.|+|+|.|.|+.|+|+|..+..
T Consensus 126 ~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~ 205 (242)
T 4apx_B 126 TFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDK 205 (242)
T ss_dssp EESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTC
T ss_pred cccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhC
Confidence 38899999999999999999976 78999999999999999986532
Q ss_pred CeEEEEEEEEECCCCC---CeEEEEEEEEEEeC
Q psy11815 47 ESYFNIDIGSDLTGGP---DQVYLIVYIQVQNV 76 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~---~~~~~~v~i~V~d~ 76 (141)
..|.|+|.|+|+|.|+ +++.+.|+|.|.--
T Consensus 206 ~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~~ 238 (242)
T 4apx_B 206 TRYYVIIQANDRAQNLNERRTTTTTLTVDLEHH 238 (242)
T ss_dssp CEEEEEEEEEECCSSGGGCCEEEEEEEEEEECC
T ss_pred CEEEEEEEEEECCcCchhcccCCceEEEEEeec
Confidence 7999999999999874 78888999998753
No 41
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.53 E-value=2.7e-14 Score=100.08 Aligned_cols=75 Identities=16% Similarity=0.172 Sum_probs=68.0
Q ss_pred CCCCCeeEEEEecCCCCCceeEEEEeEECCC--CCCCeEEEEEecCC------C-------------------------C
Q psy11815 1 MTLDPVYYAQIVENQSGILPIVQLAASDGDL--DPDQRISYKISAGN------P-------------------------E 47 (141)
Q Consensus 1 ~f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~--~~n~~v~y~i~~~~------~-------------------------~ 47 (141)
.|.+..|.+.|+||+++|+.|++|.|+|+|. +.|+.++|+|.++. . .
T Consensus 107 ~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~ 186 (218)
T 3k5r_A 107 IFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLE 186 (218)
T ss_dssp CCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCS
T ss_pred cccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccC
Confidence 4888999999999999999999999999999 78999999998543 1 2
Q ss_pred --eEEEEEEEEECC--CCCCeEEEEEEEEEEe
Q psy11815 48 --SYFNIDIGSDLT--GGPDQVYLIVYIQVQN 75 (141)
Q Consensus 48 --~y~l~v~a~d~~--~~~~~~~~~v~i~V~d 75 (141)
.|.|.|.|+|.| .|+++++++|+|+|.|
T Consensus 187 ~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 187 NPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp CSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 899999999999 7889999999999987
No 42
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.49 E-value=6.3e-14 Score=86.81 Aligned_cols=65 Identities=22% Similarity=0.033 Sum_probs=58.4
Q ss_pred eEEEEecCCCC--CceeEEEEeEECCCCCCCeEEEEEecC----CC------------------------CeEEEEEEEE
Q psy11815 7 YYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAG----NP------------------------ESYFNIDIGS 56 (141)
Q Consensus 7 y~~~V~E~~~~--g~~v~~v~a~D~D~~~n~~v~y~i~~~----~~------------------------~~y~l~v~a~ 56 (141)
+.++|+||+++ |+.|++|.|+|+|. .++|+|.+. +. ..|.|+|.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 57899999999 99999999999997 799999752 11 8999999999
Q ss_pred ECCCCCCeEEEEEEEEEEe
Q psy11815 57 DLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 57 d~~~~~~~~~~~v~i~V~d 75 (141)
|.|.+++++.++|.|+|+|
T Consensus 81 D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 81 DENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCceeeEEEEEEEEEC
Confidence 9999999999999999987
No 43
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.46 E-value=3.9e-13 Score=83.21 Aligned_cols=64 Identities=22% Similarity=0.165 Sum_probs=57.3
Q ss_pred EEEEecCCCCC--ceeEEEEeEECCCCCCCeEEEEEecCC----C------------------------CeEEEEEEEEE
Q psy11815 8 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGN----P------------------------ESYFNIDIGSD 57 (141)
Q Consensus 8 ~~~V~E~~~~g--~~v~~v~a~D~D~~~n~~v~y~i~~~~----~------------------------~~y~l~v~a~d 57 (141)
.++|+||.+.| +.|++|.|+|+|. .++|+|.+.. . ..|.|+|.|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 47899999987 8999999999997 7999998631 1 89999999999
Q ss_pred CCCCCCeEEEEEEEEEEe
Q psy11815 58 LTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 58 ~~~~~~~~~~~v~i~V~d 75 (141)
.|.|++++.++|.|+|+|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999987
No 44
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.45 E-value=1.8e-13 Score=84.87 Aligned_cols=65 Identities=17% Similarity=0.121 Sum_probs=57.8
Q ss_pred eEEEEecCCCC--CceeEEEEeEECCCCCCCeEEEEEecCC----C------------------------CeEEEEEEEE
Q psy11815 7 YYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAGN----P------------------------ESYFNIDIGS 56 (141)
Q Consensus 7 y~~~V~E~~~~--g~~v~~v~a~D~D~~~n~~v~y~i~~~~----~------------------------~~y~l~v~a~ 56 (141)
..+.|+||.++ |+.|++|.|+|+|. .++|+|.+.. + ..|.|+|.|+
T Consensus 6 ~~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 81 (100)
T 3k6f_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (100)
T ss_dssp CCEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEE
Confidence 46899999998 89999999999997 6899997521 1 8999999999
Q ss_pred ECCCCCCeEEEEEEEEEEe
Q psy11815 57 DLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 57 d~~~~~~~~~~~v~i~V~d 75 (141)
|.|.|++++.++|.|+|+|
T Consensus 82 D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 82 DASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCcccceEEEEEEEEC
Confidence 9999999999999999987
No 45
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.42 E-value=2e-13 Score=85.42 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=57.5
Q ss_pred eEEEEecCCC--CCceeEEEEeEECCCCCCCeEEEEEecCC------C----------------------CeEEEEEEEE
Q psy11815 7 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGN------P----------------------ESYFNIDIGS 56 (141)
Q Consensus 7 y~~~V~E~~~--~g~~v~~v~a~D~D~~~n~~v~y~i~~~~------~----------------------~~y~l~v~a~ 56 (141)
+.++|+||++ .|+.|+++.| | .+.|++|+|+|.+++ . ..|.|+|.|+
T Consensus 9 ~~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~ 85 (105)
T 2omz_B 9 PPISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAV 85 (105)
T ss_dssp CCCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred cCEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEE
Confidence 3578999999 5789999999 3 357999999998753 1 8999999999
Q ss_pred ECCCCCCeEEEEEEEEEEeC
Q psy11815 57 DLTGGPDQVYLIVYIQVQNV 76 (141)
Q Consensus 57 d~~~~~~~~~~~v~i~V~d~ 76 (141)
|.|.|++++++.|.|+|+|+
T Consensus 86 D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 86 SSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp CTTSCBSSCCEEEEEEEEC-
T ss_pred ECCCCceeeEEEEEEEEEeC
Confidence 99999999999999999985
No 46
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=1.3e-12 Score=83.83 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=58.0
Q ss_pred CCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcC----CCCCcEEEeCCCeEEC
Q psy11815 76 VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGSLG 141 (141)
Q Consensus 76 ~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~----~~~~~F~Id~~tG~i~ 141 (141)
.+.+.|.|..+.|.+.+.|+.++|+.|++|. +|.|.|.|+.|+|+|..+ +..++|.||+.||.|+
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 73 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELN 73 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEE
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEE
Confidence 3689999999999999999999999999999 699999899999999875 3457999999999984
No 47
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.18 E-value=1.9e-11 Score=75.57 Aligned_cols=52 Identities=27% Similarity=0.299 Sum_probs=46.1
Q ss_pred eEEEEecCCC--CCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcEEEeCCCeEEC
Q psy11815 88 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141 (141)
Q Consensus 88 ~~~~v~e~~~--~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F~Id~~tG~i~ 141 (141)
+.+.|+|+.+ .|+.|++|. +|+|.| |++|+|+|..++..++|.||+.||.|+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~ 59 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIH 59 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEE
Confidence 5678999976 688999999 999999 999999998866667899999999984
No 48
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.16 E-value=2.5e-11 Score=74.85 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=44.1
Q ss_pred eEEEEecCCC--CCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcEEEeCCCeEEC
Q psy11815 88 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSLG 141 (141)
Q Consensus 88 ~~~~v~e~~~--~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F~Id~~tG~i~ 141 (141)
+.+.|+|+.+ .|+.|+++. +|+|.| |++|+|+|..+...++|.||+.||.|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~ 58 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIH 58 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEE
Confidence 5678999985 899999997 999999 999999998765667899999999984
No 49
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.08 E-value=2.3e-11 Score=75.72 Aligned_cols=69 Identities=17% Similarity=0.078 Sum_probs=51.1
Q ss_pred CeeEEEEecCCCCCceeEEEEeEECCCCCC--CeEEEEEecCCC----------------------------C--eEEEE
Q psy11815 5 PVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNP----------------------------E--SYFNI 52 (141)
Q Consensus 5 ~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n--~~v~y~i~~~~~----------------------------~--~y~l~ 52 (141)
..|..+|+|++++|+.|++| |.|.|...+ +.++|+|.+++. . .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 46888999999999999999 999886322 357888876543 1 44555
Q ss_pred EEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 53 DIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 53 v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
|.+ . .| + ..+.|.|+|+|+|||
T Consensus 82 v~~--~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIV--D-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEE--T-TT-T-EEEEEEEEEECCSCC
T ss_pred EEE--C-CC-C-EEEEEEEEEEEcCCC
Confidence 544 3 23 3 378999999999997
No 50
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=98.97 E-value=2.9e-10 Score=70.17 Aligned_cols=50 Identities=24% Similarity=0.204 Sum_probs=43.4
Q ss_pred eEEEEecCCCC--CceEEEEEEEECCCCCCCeEEEEEEc----CCCCCcEEEeCCCeEEC
Q psy11815 88 YYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISA----GNPESYFNIDIGSGSLG 141 (141)
Q Consensus 88 ~~~~v~e~~~~--g~~v~~v~a~D~D~~~~~~i~Y~i~~----~~~~~~F~Id~~tG~i~ 141 (141)
+.+.|+||.++ |+.|++|.|+|+|. .++|+|.. +++.+.|.||+.||.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~ 60 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVS 60 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEE
Confidence 36789999999 99999999999996 79999975 34457999999999984
No 51
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=98.89 E-value=1.3e-09 Score=67.35 Aligned_cols=49 Identities=22% Similarity=0.324 Sum_probs=42.2
Q ss_pred EEEEecCCCC--CceEEEEEEEECCCCCCCeEEEEEEcC----CCCCcEEEeCCCeEEC
Q psy11815 89 YAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGSLG 141 (141)
Q Consensus 89 ~~~v~e~~~~--g~~v~~v~a~D~D~~~~~~i~Y~i~~~----~~~~~F~Id~~tG~i~ 141 (141)
.+.|+||.+. |+.|++|.|+|+|. .|+|+|... ++.+.|.||+.||.|.
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~ 61 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVS 61 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEE
Confidence 5789999998 89999999999996 689999752 3457999999999984
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=98.88 E-value=1.9e-09 Score=66.43 Aligned_cols=49 Identities=24% Similarity=0.342 Sum_probs=42.0
Q ss_pred EEEEecCCCCC--ceEEEEEEEECCCCCCCeEEEEEEcC----CCCCcEEEeCCCeEEC
Q psy11815 89 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGSLG 141 (141)
Q Consensus 89 ~~~v~e~~~~g--~~v~~v~a~D~D~~~~~~i~Y~i~~~----~~~~~F~Id~~tG~i~ 141 (141)
.+.|+||.+.| +.|++|.|+|+|. .|+|+|... ++.+.|.||+.||.|.
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~ 60 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVS 60 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEE
Confidence 46899999986 8899999999996 799999852 3457999999999984
No 53
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=98.85 E-value=3.8e-10 Score=72.49 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=46.6
Q ss_pred CCceEEEEecCCCCCceEEEEEEEECCCCCCCeE---EEEEEcCCCCCcEEEeCCCeEEC
Q psy11815 85 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI---SYKISAGNPESYFNIDIGSGSLG 141 (141)
Q Consensus 85 ~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i---~Y~i~~~~~~~~F~Id~~tG~i~ 141 (141)
...+.+.|+|+.++|+.|++| |+|.|.+. +.+ +|+|..++..++|.||+.||.|+
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~ 67 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLL 67 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEE
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEE
Confidence 356788999999999999999 99888753 345 89999877778999999999984
No 54
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=98.83 E-value=2.9e-09 Score=66.83 Aligned_cols=52 Identities=25% Similarity=0.442 Sum_probs=42.9
Q ss_pred ceEEEEecCCCCCce--EEEEEEEECCCCCCCeEEEEEEcC----CCCCcEEEeCCCeEEC
Q psy11815 87 VYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGSLG 141 (141)
Q Consensus 87 ~~~~~v~e~~~~g~~--v~~v~a~D~D~~~~~~i~Y~i~~~----~~~~~F~Id~~tG~i~ 141 (141)
.|.+.|+|+.++|+. |+++ |.|.+.|+.|+|+|..+ +..++|.||+.||.|+
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 63 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLS 63 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEE
Confidence 368899999999995 4544 78888899999999863 4457999999999984
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.79 E-value=1.4e-10 Score=72.16 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=46.7
Q ss_pred CceEEEEecCCCCCceEEEEEEEECCCCCC--CeEEEEEEcCCCCCcEEEeCCCeEEC
Q psy11815 86 PVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDIGSGSLG 141 (141)
Q Consensus 86 ~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~--~~i~Y~i~~~~~~~~F~Id~~tG~i~ 141 (141)
..+.+.|+|+.++|+.|++| |.|.|...+ ..++|+|..++..++|.||+.||.|+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~ 59 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILF 59 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEE
Confidence 45788999999999999999 999886422 36899998877778999999999984
No 56
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=98.71 E-value=7.4e-09 Score=64.45 Aligned_cols=50 Identities=22% Similarity=0.265 Sum_probs=41.0
Q ss_pred EEEEecCCC--CCceEEEEEEEECCCCCCCeEEEEEEcCCC----CCcEEEeCCCeEEC
Q psy11815 89 YAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNP----ESYFNIDIGSGSLG 141 (141)
Q Consensus 89 ~~~v~e~~~--~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~----~~~F~Id~~tG~i~ 141 (141)
.+.|+||.+ .|..|++|.| |.+.|++|+|+|..++. .++|.||+.||.|+
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~ 65 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLK 65 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEE
Confidence 467999998 4779999999 33579999999987653 36899999999984
No 57
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=93.17 E-value=1.7 Score=31.37 Aligned_cols=72 Identities=11% Similarity=-0.040 Sum_probs=39.0
Q ss_pred EEEEEEEECC-CCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcC
Q psy11815 50 FNIDIGSDLT-GGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125 (141)
Q Consensus 50 ~l~v~a~d~~-~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~ 125 (141)
.|.|..++.. +..+......+|+|.| ||++|.|.-..-.+.|.|+. |.....|.-... ....-.+.|+...+
T Consensus 92 tF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g~vtV~~~T~dG 164 (298)
T 3rb5_A 92 CFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARGTVIVPYWTEND 164 (298)
T ss_dssp EEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCSCEEEEEEEEEC
T ss_pred EEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCCCEEEEEEecCC
Confidence 4555555532 2223333356677777 57788876555567888874 555555544332 22233566765544
No 58
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.03 E-value=1.4 Score=26.38 Aligned_cols=30 Identities=17% Similarity=-0.004 Sum_probs=25.6
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCC
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd 78 (141)
..|.|++.++|..+ .+++.++.|.|...+.
T Consensus 69 G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 69 GTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp SEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred eEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 78999999999876 6788899999987653
No 59
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=86.62 E-value=1.9 Score=32.88 Aligned_cols=27 Identities=19% Similarity=-0.020 Sum_probs=24.7
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEE
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQV 73 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V 73 (141)
..|.|++.++|.+.|++++..+|.|+|
T Consensus 410 ~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 410 KDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred cEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 789999999999988899999999887
No 60
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=86.51 E-value=4.4 Score=25.54 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=50.1
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC---CeEE---EEEEEEECCCCCCeEEEEEEEEEEe
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP---ESYF---NIDIGSDLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~---~~y~---l~v~a~d~~~~~~~~~~~v~i~V~d 75 (141)
|.++.| .|.|+. |+.-..|.-. .+......+.|+...|.. ..|. -++. ...| ....++.|.|.|
T Consensus 9 F~~~~y--~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~-F~~G----et~k~i~V~I~d 78 (137)
T 3ead_A 9 FEPGHY--TVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFVGRKGLLS-FPPG----VDEQRFRIEVID 78 (137)
T ss_dssp ESSCEE--EEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSSCBTTTBCCCEEEEE-ECTT----CCEEEEEEEBCC
T ss_pred EcCCEE--EEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCcCCCCcEeEeeEEEE-ECCC----ceEEEEEEEEec
Confidence 555555 568875 4444444433 244445678899877664 1221 1111 1122 235667777754
Q ss_pred CCCCCCccCCCceEEEEecC---CCCCc-eEEEEEEEECCC
Q psy11815 76 VNDNVPMTLDPVYYAQIVEN---QSGIL-PIVQLAASDGDL 112 (141)
Q Consensus 76 ~Nd~~P~f~~~~~~~~v~e~---~~~g~-~v~~v~a~D~D~ 112 (141)
|..+.- ...+.+.+... ..+|. ..++++..|.|.
T Consensus 79 --D~~~E~-~E~F~v~L~~p~~~a~lg~~~~atvtI~ddD~ 116 (137)
T 3ead_A 79 --DDVFEE-DECFYIRLFNPSEGVKLAVPMIATVMILDDDH 116 (137)
T ss_dssp --CSSCCC-CEEEEEEEECCCTTCEECSCSEEEEEEECCC-
T ss_pred --CCcccC-cEEEEEEEECCCCCcEECCCcEEEEEEECCCC
Confidence 444432 23355555532 23443 356777788875
No 61
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=83.48 E-value=5 Score=26.16 Aligned_cols=41 Identities=20% Similarity=0.270 Sum_probs=24.0
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 46 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~ 46 (141)
|.++.| .|.|+. |+.-..|.-...+.+....|.|+..+|..
T Consensus 27 F~~~~y--~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 27 FEQGTY--QCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp ESCSEE--EEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred EeCCEE--EEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 556655 467875 55444444443343345578898877664
No 62
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=83.28 E-value=7.1 Score=25.19 Aligned_cols=68 Identities=13% Similarity=0.019 Sum_probs=43.4
Q ss_pred EEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCC
Q psy11815 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81 (141)
Q Consensus 9 ~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P 81 (141)
.+..+..+..+..-++.+.|.+ |-.+.|++.+|+. ..|..++.+...+.. .+.+..++.-.-.+++.|
T Consensus 56 ~t~~~g~~~~~~kErle~iD~~---~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~g--gsvvk~t~~Y~~~~~~~~ 128 (154)
T 2wql_A 56 ITLPEGSPITTMTVRTDAVNKE---ALSYDSTVIDGDILLGFIESIETHMVVVPTADG--GSITKTTAIFHTKGDAVV 128 (154)
T ss_dssp EECCTTCSCCEEEEEEEEEETT---TTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS--CEEEEEEEEEEESTTCCC
T ss_pred EEEcCCCCceEEEEEEEEEehh---hCEEEEEEEeccccccceEEEEEEEEEeeCCCC--cEEEEEEEEEEECCCCCC
Confidence 3445555555566688888876 6789999999874 677777776665532 234455555555555443
No 63
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=82.09 E-value=4.4 Score=24.17 Aligned_cols=28 Identities=18% Similarity=-0.113 Sum_probs=20.4
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~d 75 (141)
..|.|.++|.|..+.. ..+..|.|.|.+
T Consensus 61 G~htl~a~AtD~~G~~-~tS~~v~vtV~~ 88 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAA-STPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEEEEETTCCB-CCCEEEEEEEEC
T ss_pred ccEEEEEEEEECCCCE-EeeeEEEEEECc
Confidence 7899999999987642 334667777764
No 64
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=81.91 E-value=12 Score=26.89 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=31.0
Q ss_pred EEEEEEEEeCCCCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcC
Q psy11815 67 LIVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG 125 (141)
Q Consensus 67 ~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~ 125 (141)
...+|+|.| ||++|.|.-..-...|.|+. |.....|.-.- +....-.+.|+...+
T Consensus 128 ~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~-~~~g~VtV~y~T~~G 182 (295)
T 3us9_A 128 STATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTS-GARGNVIVPYKTIEG 182 (295)
T ss_dssp CEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEES-CCCSCEEEEEEEECC
T ss_pred ceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEc-CCCccEEEEEEecCC
Confidence 456677776 47788765444456788873 54444444332 222233566766554
No 65
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=76.51 E-value=13 Score=24.21 Aligned_cols=66 Identities=9% Similarity=0.014 Sum_probs=42.2
Q ss_pred EEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCC
Q psy11815 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81 (141)
Q Consensus 10 ~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P 81 (141)
+..+..+.+...-+|.+.|.+ |-.++|+|.+|+. ..|..++++. .+. -.+.+..++...-.++..|
T Consensus 64 ~~~~g~~~~~~kErl~~iD~~---~~~~~Y~iieG~~l~~~~~~y~~~i~v~-~~~--ggs~vkwt~~y~~~~~~~~ 134 (165)
T 3ie5_A 64 TFVDGHPLTYMLHKFDEIDAA---NFYCKYTLFEGDVLRDNIEKVVYEVKLE-AVG--GGSKGKITVTYHPKPGCTV 134 (165)
T ss_dssp EECTTSSCCEEEEEEEEEEGG---GTEEEEEEEEEGGGTTTEEEEEEEEEEE-EET--TEEEEEEEEEEEECTTCCC
T ss_pred EecCCCCCceEEEEEEEEchh---cCEEEEEEecCCCCccceEEEEEEEEEE-eCC--CceEEEEEEEEEECCCCCC
Confidence 334444445566678888876 6789999998863 6666666665 221 1345666666666776543
No 66
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=75.99 E-value=8.1 Score=31.10 Aligned_cols=59 Identities=12% Similarity=0.044 Sum_probs=36.6
Q ss_pred EEEeEECCCCCCCeEEEEEecCCC------------------CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCccC
Q psy11815 23 QLAASDGDLDPDQRISYKISAGNP------------------ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTL 84 (141)
Q Consensus 23 ~v~a~D~D~~~n~~v~y~i~~~~~------------------~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~ 84 (141)
.+.|.+-....+-+..|+|.+-+. ..|.|.|+|++..+......+.+.|.|. ||.+.
T Consensus 712 ~fs~l~y~~~~~~~y~YrL~G~d~~W~~~~~~~~~~ytnL~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~-----Ppww~ 786 (795)
T 4a2l_A 712 EFVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPIPTALEIIVL-----PIWYK 786 (795)
T ss_dssp EEEECCTTTTTCCEEEEEEETTCSSCEEESSCCEEEEECCCSEEEEEEEEEECTTSCBCSSCEEEEEEEC-----CCC--
T ss_pred EEEEccCCCccccEEEEEEeCCCCCccCCCCcCeEEecccCCCeEEEEEEEECCCCccCCCceEEEEEEE-----CCccc
Confidence 344544444556678888876433 8999999999987642233567788773 67665
Q ss_pred CC
Q psy11815 85 DP 86 (141)
Q Consensus 85 ~~ 86 (141)
.+
T Consensus 787 t~ 788 (795)
T 4a2l_A 787 TL 788 (795)
T ss_dssp --
T ss_pred Cc
Confidence 44
No 67
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=75.40 E-value=3.2 Score=27.20 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=39.8
Q ss_pred CCCCccCCCceEEEEecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCCCCCcEEEeCCCeEE
Q psy11815 78 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGSL 140 (141)
Q Consensus 78 d~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~~~~~F~Id~~tG~i 140 (141)
...|-|.+..|...++-....|..+++|.-.|-. .+..+.|.-.. + ..|.|+++ |.|
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ssD--p-~dFkV~~D-GtV 87 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESSE--P-ADFKVDED-GTV 87 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECCC--S-SEEEEETT-TEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcCC--C-CCeEEeCC-CcE
Confidence 3568899999977777788889999988877665 45566665432 1 24887776 543
No 68
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=72.24 E-value=17 Score=23.66 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=40.5
Q ss_pred CCCCeeEEEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecC--------CC-----------CeEEEEEEEEECCC
Q psy11815 2 TLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG--------NP-----------ESYFNIDIGSDLTG 60 (141)
Q Consensus 2 f~~~~y~~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~--------~~-----------~~y~l~v~a~d~~~ 60 (141)
|.++.|...++-+...|..+++|.-.|-.. +..+.|.-.++ .. ..-.|.|.|.|...
T Consensus 36 F~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssDp~dFkV~~DGtVya~r~v~L~~~~~~F~V~a~D~~t 111 (159)
T 1op4_A 36 FPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKET 111 (159)
T ss_dssp CCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCSSEEEEETTTEEEEESCCSCSSSCEEEEEEEEETTT
T ss_pred cCcceeEEeccccccCCceeceeecccCCC--CCceeEEcCCCCCeEEeCCCcEEEecceeecCCCcEEEEEEEcCCC
Confidence 788999888888888999999988877754 44455554443 11 44578888988543
No 69
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=69.67 E-value=19 Score=23.12 Aligned_cols=63 Identities=17% Similarity=0.102 Sum_probs=40.8
Q ss_pred cCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCC
Q psy11815 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80 (141)
Q Consensus 13 E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~ 80 (141)
+..+.+...-+|.+.|.+ |-.++|+|.+|+. ..|..++++...+.. .+....+....-.++..
T Consensus 60 ~g~~~~~~kErl~~iD~~---~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~g--gs~v~wt~~y~~~~~~~ 127 (159)
T 4a8u_A 60 EGFPFKYVKDRVDEVDHT---NFKYSYSVIEGGPVGDTLEKISNEIKIVATPNG--GSILKINNKYHTKGDHE 127 (159)
T ss_dssp TTSSCSEEEEEEEEEETT---TTEEEEEEEEETTCBTTEEEEEEEEEEEECTTS--CEEEEEEEEEEESSSCC
T ss_pred cCCCccEEEEEEEEEccc---cCEEEEEEeeCCCCccceEEEEEEEEEEECCCC--ceEEEEEEEEEECCCCc
Confidence 444444556678888866 6789999998874 567777777665432 34566666666666543
No 70
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=69.12 E-value=20 Score=22.98 Aligned_cols=63 Identities=14% Similarity=0.029 Sum_probs=41.7
Q ss_pred cCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCC
Q psy11815 13 ENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80 (141)
Q Consensus 13 E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~ 80 (141)
+..+.....-++.+.|.+ |-.+.|+|.+|+. ..|..++++...+.. .+.+..+....-.++..
T Consensus 60 ~g~~~~~~kErl~~iD~~---~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~g--gs~v~wt~~y~~~~~~~ 127 (154)
T 2vjg_A 60 EGSPITTMTVRTDAVNKE---ALSYDSTVIDGDILLGFIESIETHMVVVPTADG--GSITKTTAIFHTKGDAV 127 (154)
T ss_dssp TTCSCCEEEEEEEEEETT---TTEEEEEEEESGGGTTTEEEEEEEEEEEECTTS--CEEEEEEEEEEESTTCC
T ss_pred CCCCceEEEEEEEEEecc---CCEEEEEEEecCCCccceEEEEEEEEEEECCCC--cEEEEEEEEEEECCCCC
Confidence 343434555678888875 6789999999864 677777777765432 24566666666666654
No 71
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=66.47 E-value=15 Score=20.75 Aligned_cols=26 Identities=15% Similarity=0.052 Sum_probs=20.2
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQ 74 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~ 74 (141)
..|.+++.++|..+ ...+.++.|.|.
T Consensus 59 G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 59 GTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp EEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred eEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 78999999999876 456667777764
No 72
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=64.06 E-value=34 Score=23.81 Aligned_cols=25 Identities=8% Similarity=-0.106 Sum_probs=18.4
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEE
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQ 72 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~ 72 (141)
..|.|+|.|.|..++..+. ..+.|+
T Consensus 211 TeYsF~V~A~d~~G~~Ss~-e~vtVr 235 (238)
T 2w1n_A 211 TIYNFKIAAKYSNGEVSSK-ESLTLR 235 (238)
T ss_dssp CEEEEEEEEEETTSCBCCC-EEEEEE
T ss_pred CEEEEEEEEEeCCCCcccc-CcEEEE
Confidence 8999999999998764333 455543
No 73
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=63.66 E-value=26 Score=22.35 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=35.4
Q ss_pred CceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCC
Q psy11815 18 ILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVP 81 (141)
Q Consensus 18 g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P 81 (141)
+...-++.+.|.+ |-.+.|+|.+|+. ..|..++++...+.. .+.+..++...-.++..|
T Consensus 65 ~~~kErl~~iD~~---~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~g--gs~v~wt~~y~~~~~~~~ 128 (155)
T 2flh_A 65 SYQREEITEFDES---SHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEED--KTLVNVKISYDHDSDIEE 128 (155)
T ss_dssp CEEEEEEEEEETT---TTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETT--EEEEEEEEEEEC------
T ss_pred cEEEEEEEEEeCC---CCEEEEEEEeccccccCceEEEEEEEEEECCCC--CEEEEEEEEEEECCCCcc
Confidence 4555677878765 6789999998863 677776666554321 245666666666666555
No 74
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=63.45 E-value=21 Score=24.34 Aligned_cols=45 Identities=11% Similarity=0.195 Sum_probs=29.6
Q ss_pred EEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--CeEEEEEEEEE
Q psy11815 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSD 57 (141)
Q Consensus 10 ~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--~~y~l~v~a~d 57 (141)
++.+..|.+...-+|.+.|.+ +-.++|+|.+++. ..|.-++++..
T Consensus 102 t~~~G~p~~~vkErL~~lDd~---~~~~sYsIieg~lpv~~Y~sti~V~p 148 (211)
T 3k3k_A 102 IVISGLPANTSTERLDILDDE---RRVTGFSIIGGEHRLTNYKSVTTVHR 148 (211)
T ss_dssp EESSSSSCEEEEEEEEEEETT---TTEEEEEEEEETTGGGTCEEEEEEEE
T ss_pred EecCCCccceEEEEEEEEecc---CCEEEEEEeecCcceeEEEEEEEEEE
Confidence 344444445666678888766 5689999998764 56666666554
No 75
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=62.44 E-value=27 Score=22.25 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=35.5
Q ss_pred CceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 18 ILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 18 g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
+...-++.+.|.+ |-.+.|+|.+|+. ..|..++++...+.. .+....++...-.++.
T Consensus 65 ~~~kErl~~~D~~---~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~--gs~v~wt~~y~~~~~~ 126 (159)
T 1e09_A 65 GYVKHKIDSIDKE---NYSYSYTLIEGDALGDTLEKISYETKLVASPSG--GSIIKSTSHYHTKGNV 126 (159)
T ss_dssp EEEEEEEEEEETT---TTEEEEEECCCTTTGGGEEEEEEEEEECCCTTS--SEEEEEEEEEEECSSC
T ss_pred eEEEEEEEEEcCC---CCEEEEEEEecccCcccceEEEEEEEEEecCCC--CEEEEEEEEEEECCCC
Confidence 3444567777755 6789999999875 567777777654321 2445555555554443
No 76
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.04 E-value=16 Score=29.21 Aligned_cols=58 Identities=19% Similarity=0.245 Sum_probs=36.8
Q ss_pred EEEeEECCCCCCCeEEEEEecCCC-------------------CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCcc
Q psy11815 23 QLAASDGDLDPDQRISYKISAGNP-------------------ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMT 83 (141)
Q Consensus 23 ~v~a~D~D~~~n~~v~y~i~~~~~-------------------~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f 83 (141)
.+.|.+-..+.+.+..|+|.+-+. ..|.|.|+|++..+........+.|+|. ||..
T Consensus 677 ~f~~l~y~~~~~~~y~Y~L~G~d~~W~~~~~~~~~~~ytnL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~-----Pp~~ 751 (758)
T 3ott_A 677 ELSDLPYSLDEKNKFVYRLEGMDKEWNFLKSNINRITYSNLSYGNYQLIISKLERDGQPSNRPHILNIRIL-----PPWL 751 (758)
T ss_dssp EEECCCTTCSSCCCEEEEEETTCSSCEECCTTCCEEEECSCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----CGGG
T ss_pred EEEcccCCCCccCeEEEEecCCCCCccCCCCCcceEEecCCCCccEEEEEEEeCCCCCccCccEEEEEEEC-----Ccch
Confidence 344444433445667788865332 7899999999977643334566778774 7766
Q ss_pred CC
Q psy11815 84 LD 85 (141)
Q Consensus 84 ~~ 85 (141)
+.
T Consensus 752 ~~ 753 (758)
T 3ott_A 752 EH 753 (758)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 77
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=58.73 E-value=32 Score=21.87 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=33.0
Q ss_pred eeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 20 PIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 20 ~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
..-++.+.|.+ |-.++|+|.+|+. ..|..++++...+.. .+.+..++...-.++.
T Consensus 67 ~kErl~~~D~~---~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~--gs~v~wt~~y~~~~~~ 126 (158)
T 2qim_A 67 VLHKIEAIDEA---NLGYNYSIVGGVGLPDTIEKISFETKLVEGANG--GSIGKVTIKIETKGDA 126 (158)
T ss_dssp EEEEEEEEEGG---GTEEEEEEEEESSCCCSEEEEEEEEEEEECSTT--CEEEEEEEEEEESTTC
T ss_pred EEEEEEEEecC---CCEEEEEEEeccCCccceEEEEEEEEEEecCCC--CEEEEEEEEEEECCCC
Confidence 33456666644 6789999998874 366666666665422 2445555555544443
No 78
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=53.87 E-value=17 Score=29.09 Aligned_cols=28 Identities=7% Similarity=-0.114 Sum_probs=20.6
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQ 74 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~ 74 (141)
..|.|.|+|++..+.-....+.+.|.|.
T Consensus 748 G~Y~f~V~a~~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 748 GKYEFLVKARLHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp EEEEEEEEEEETTSCCCSCCEEEEEEEC
T ss_pred ceEEEEEEEECCCCccCCCceEEEEEEc
Confidence 8999999999987643334566777773
No 79
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=53.77 E-value=40 Score=21.42 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=32.9
Q ss_pred eeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 20 PIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 20 ~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
..-++.+.|.+ |-.++|++.+|+. ..|..++++...+.. .+.+..++...-.++.
T Consensus 66 ~kErl~~~D~~---~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~--gs~v~w~~~y~~~~~~ 125 (157)
T 1tw0_A 66 VLQKVDAIDEA---NLGYDYSIVGGTGLPESLEKLSFETKVVAGSGG--GSISKVTLKFHTKGDA 125 (157)
T ss_dssp EEEEEEEEETT---TTEEEEEEEECTTSCTTEEEEEEEEEEEECSSS--SEEEEEEEEEEESTTC
T ss_pred EEEEEEEEecc---CCEEEEEEEecCCCccceEEEEEEEEEEecCCC--CEEEEEEEEEEECCCC
Confidence 34466666654 6789999999874 466666666655321 1345555555444443
No 80
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=52.76 E-value=51 Score=22.35 Aligned_cols=46 Identities=13% Similarity=0.236 Sum_probs=30.9
Q ss_pred EEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--CeEEEEEEEEE
Q psy11815 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSD 57 (141)
Q Consensus 9 ~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--~~y~l~v~a~d 57 (141)
.+..+..|.+...-+|.+.|.+ +-.++|+|.+++. ..|.-++++..
T Consensus 105 lt~~~G~p~~~vkErL~~lDde---~~~~sYsIieG~lpv~~Y~sti~V~p 152 (208)
T 3jrs_A 105 VNVISGLPANTSRERLDLLDDD---RRVTGFSITGGEHRLRNYKSVTTVHR 152 (208)
T ss_dssp EEECTTSSCCEEEEEEEEEETT---TTEEEEEEEESSSSCTTCEEEEEEEE
T ss_pred EEecCCCccceEEEEEEEEecc---CCEEEEEEeeCCcceeeEEEEEEEEE
Confidence 3344555556666788888876 5679999998764 56666666554
No 81
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=51.50 E-value=37 Score=20.32 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=35.3
Q ss_pred EEeEECCCCC-CCeEEEE-Eec-CCCCeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCC
Q psy11815 24 LAASDGDLDP-DQRISYK-ISA-GNPESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80 (141)
Q Consensus 24 v~a~D~D~~~-n~~v~y~-i~~-~~~~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~ 80 (141)
+.|+|...+. ..+|..+ -.. .....|.++..++|..+ ...+.+.+|.|.+..+..
T Consensus 33 vtA~D~~DGDlT~~I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~ 90 (103)
T 2kpn_A 33 VLAIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVK 90 (103)
T ss_dssp CEEECSSSCBCGGGCEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCC
T ss_pred cEEEcCCCCCcceeEEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCccc
Confidence 6888876532 2334432 011 11289999999999876 567788888888765433
No 82
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=49.71 E-value=53 Score=21.69 Aligned_cols=45 Identities=11% Similarity=0.145 Sum_probs=28.3
Q ss_pred EEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--CeEEEEEEEEE
Q psy11815 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSD 57 (141)
Q Consensus 10 ~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--~~y~l~v~a~d 57 (141)
+..+..|.+...-+|.+.|.+ +-.++|+|.++.. ..|..++++..
T Consensus 78 t~~~G~p~~~vkErL~~~D~~---~~~~sY~Iieg~lp~~~y~ati~v~p 124 (183)
T 3rt2_A 78 DLKSGLPATKSTEVLEILDDN---EHILGIRIVGGDHRLKNYSSTISLHS 124 (183)
T ss_dssp EECCSSTTCEEEEEEEEEETT---TTEEEEEEEEESCSCTTCEEEEEEEE
T ss_pred EeCCCCccceEEEEEEEEECC---CCEEEEEEecCCcceeEEEEEEEEEE
Confidence 333444445566677777765 4578888888753 56666655554
No 83
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=46.03 E-value=57 Score=20.94 Aligned_cols=53 Identities=9% Similarity=0.169 Sum_probs=31.7
Q ss_pred eeEEEEeEECCCCCCCeEEEEEecCCC----CeEEEEEEEEEC--CCCCCeEEEEEEEEEEeCCC
Q psy11815 20 PIVQLAASDGDLDPDQRISYKISAGNP----ESYFNIDIGSDL--TGGPDQVYLIVYIQVQNVND 78 (141)
Q Consensus 20 ~v~~v~a~D~D~~~n~~v~y~i~~~~~----~~y~l~v~a~d~--~~~~~~~~~~v~i~V~d~Nd 78 (141)
..-++.+.|.+ |..+.|+|++|+. ..|..++++... +. .+.+..++...-.++
T Consensus 81 ~kErl~~iD~~---~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~---gs~v~wt~~ye~~~~ 139 (166)
T 2i9y_A 81 AKERIEAVEPD---KNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGP---GSIVHWHLEYEKISE 139 (166)
T ss_dssp EEEEEEEEETT---TTEEEEEECCTTGGGTEEEEEEEEEEEEEEETT---EEEEEEEEEEEESST
T ss_pred EEEEEEEEecc---CcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCC---CcEEEEEEEEEECCC
Confidence 34466777755 6789999999874 566666555443 32 234555555544433
No 84
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=45.75 E-value=55 Score=20.68 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=33.5
Q ss_pred ceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 19 LPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 19 ~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
...-++.+.|.+ |-.++|++.+|+. ..|..++++...+.. .+.+..++...-.++.
T Consensus 65 ~~kErl~~~D~~---~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~--gs~v~w~~~y~~~~~~ 125 (155)
T 1icx_A 65 FVLHKLDAIDEA---NLTYNYSIIGGEGLDESLEKISYESKILPGPDG--GSIGKINVKFHTKGDV 125 (155)
T ss_dssp EEEEEEEEEEGG---GTEEEEEEEEETTSCTTEEEEEEEEEEEECGGG--CEEEEEEEEEEESSSS
T ss_pred eEEEEEEEEecc---CCEEEEEEEecCCCccceEEEEEEEEEEecCCC--CEEEEEEEEEEECCCC
Confidence 344567777754 6789999998874 466666666654321 1345555555444443
No 85
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=42.94 E-value=73 Score=21.29 Aligned_cols=45 Identities=13% Similarity=0.286 Sum_probs=28.6
Q ss_pred EEEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--CeEEEEEEEE
Q psy11815 9 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGS 56 (141)
Q Consensus 9 ~~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--~~y~l~v~a~ 56 (141)
.++....|.++..-+|.+.|.+ +-.++|+|..+.. ..|.-++.+.
T Consensus 85 ltl~~G~P~~~i~ErL~~lDde---~~~~sY~Iieg~~pv~nY~StitV~ 131 (189)
T 3oji_A 85 VSVVSGLPASTSVEILEVLDEE---KRILSFRVLGGEHRLNNYRSVTSVN 131 (189)
T ss_dssp EEECSSSSBSEEEEEEEEEETT---TTEEEEEEEECSBSSCSCEEEEEEE
T ss_pred EEecCCCcCceEEEEEEEEecc---CCEEEEEEEecCCccccEEEEEEEE
Confidence 3444445556667788888876 5678899988763 5554444443
No 86
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=42.53 E-value=75 Score=21.34 Aligned_cols=63 Identities=6% Similarity=-0.066 Sum_probs=39.4
Q ss_pred ecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC-----CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11815 12 VENQSGILPIVQLAASDGDLDPDQRISYKISAGNP-----ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 12 ~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~-----~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
.+..+.....-++.+.|.+ |-.++|+|.+|+. ..|..++++...+.. .+.+..++...-.++.
T Consensus 85 ~~G~~~~~vkErle~iDde---~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dg--gs~vkWt~~ye~~~~~ 152 (201)
T 2vq5_A 85 VPGEFPHEYKEKFILVDNE---HRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKD--SCVIKSSTEYHVKPEF 152 (201)
T ss_dssp CTTCSSCEEEEEEEEEETT---TTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETT--EEEEEEEEEEEECGGG
T ss_pred cCCCcccEEEEEEEEEchh---hCEEEEEEEecCccccceeEEEEEEEEEECCCC--CeEEEEEEEEEECCCC
Confidence 3443445666788988866 6889999999863 566665555443221 2445566666556555
No 87
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=39.39 E-value=11 Score=23.60 Aligned_cols=31 Identities=10% Similarity=-0.075 Sum_probs=20.2
Q ss_pred EEEEEEEECCCCCCeEEEEEEEEEEeCCCCC
Q psy11815 50 FNIDIGSDLTGGPDQVYLIVYIQVQNVNDNV 80 (141)
Q Consensus 50 ~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~ 80 (141)
.|+|...|...-.--.+++|++-|.|+|.||
T Consensus 49 DLtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 49 DLTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GGCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred CcEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 3566666765421124578999999997654
No 88
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=37.89 E-value=77 Score=20.16 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=15.7
Q ss_pred ecCCCCCceEEEEEEEECCCCCCCeEEEEEEcCC
Q psy11815 93 VENQSGILPIVQLAASDGDLDPDQRISYKISAGN 126 (141)
Q Consensus 93 ~e~~~~g~~v~~v~a~D~D~~~~~~i~Y~i~~~~ 126 (141)
.+..+.....-++.+.|.+ +..+.|++..|+
T Consensus 59 ~~g~~~~~~kErle~iD~~---~~~~~y~iieGd 89 (154)
T 2wql_A 59 PEGSPITTMTVRTDAVNKE---ALSYDSTVIDGD 89 (154)
T ss_dssp CTTCSCCEEEEEEEEEETT---TTEEEEEEEESG
T ss_pred cCCCCceEEEEEEEEEehh---hCEEEEEEEecc
Confidence 3333333344455555555 455666666554
No 89
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=37.43 E-value=68 Score=19.40 Aligned_cols=51 Identities=8% Similarity=0.099 Sum_probs=34.2
Q ss_pred EEEeEECCCCCCCeEEEEEecCCC----CeEEEEEEEEEC--CCCCCeEEEEEEEEEEeCCCC
Q psy11815 23 QLAASDGDLDPDQRISYKISAGNP----ESYFNIDIGSDL--TGGPDQVYLIVYIQVQNVNDN 79 (141)
Q Consensus 23 ~v~a~D~D~~~n~~v~y~i~~~~~----~~y~l~v~a~d~--~~~~~~~~~~v~i~V~d~Nd~ 79 (141)
++.+.|.. |-.+.|++.+|+- ..|..++++... ++ .+.+..++.-.-.+++
T Consensus 39 ~ie~iD~~---~~~~~y~iieGd~~~~~~~~~~~~~v~~~~~~~---gs~vkwt~~ye~~~~~ 95 (122)
T 1vjh_A 39 EIEAVDLV---KKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGD---GSHVVWTFHFEKVHKD 95 (122)
T ss_dssp EEEEEETT---TTEEEEEEECTTGGGTEEEEEEEEEEEECSSSS---CEEEEEEEEEEESSTT
T ss_pred EEEEEecc---cCEEEEEEEEccccccEEEEEEEEEEEEecCCC---CeEEEEEEEEEECCCC
Confidence 78888865 7899999999875 677777777665 32 2345555554444443
No 90
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=36.84 E-value=96 Score=20.93 Aligned_cols=47 Identities=15% Similarity=0.180 Sum_probs=29.5
Q ss_pred EEecCCCCCceeEEEEeEECCCCCCCeEEEEEecCCC--CeEEEEEEEEECC
Q psy11815 10 QIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSDLT 59 (141)
Q Consensus 10 ~V~E~~~~g~~v~~v~a~D~D~~~n~~v~y~i~~~~~--~~y~l~v~a~d~~ 59 (141)
+..+..|.+...-+|.+.|.+ +-.++|+|.++.- ..|..++++...+
T Consensus 102 t~~~G~p~~~vkErL~~lDde---~~~~sYsIieG~lpv~~Y~ati~V~p~~ 150 (205)
T 3oqu_A 102 NVKSGLPATTSTERLELLDDE---EHILGIKIIGGDHRLKNYSSILTVHPEI 150 (205)
T ss_dssp EECTTSSCSEEEEEEEEEETT---TTEEEEEEEEESSSCTTCEEEEEEEEEC
T ss_pred EEcCCCccceEEEEEEEEECC---CCEEEEEEEecCcceeEEEEEEEEEEcc
Confidence 333444445566677777765 5678888887743 6666666665544
No 91
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=35.73 E-value=93 Score=20.43 Aligned_cols=16 Identities=19% Similarity=-0.056 Sum_probs=10.9
Q ss_pred CCCceEEEEEEEECCC
Q psy11815 97 SGILPIVQLAASDGDL 112 (141)
Q Consensus 97 ~~g~~v~~v~a~D~D~ 112 (141)
..|...++++|+|...
T Consensus 151 ~~G~~tl~a~A~D~aG 166 (190)
T 3pdd_A 151 VEGNHEISVIAYDDDD 166 (190)
T ss_dssp CSEEEEEEEEEEETTC
T ss_pred CCeeEEEEEEEEECCC
Confidence 5666677777777763
No 92
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=35.59 E-value=85 Score=19.93 Aligned_cols=27 Identities=7% Similarity=0.073 Sum_probs=17.2
Q ss_pred CeEEEEEecCCC---------CeEEEEEEEEECCCC
Q psy11815 35 QRISYKISAGNP---------ESYFNIDIGSDLTGG 61 (141)
Q Consensus 35 ~~v~y~i~~~~~---------~~y~l~v~a~d~~~~ 61 (141)
|.-+|.|....+ ..|.++|.+.|.+..
T Consensus 61 G~Y~YtI~E~~G~~~gvtYD~~~y~VtV~V~~d~~G 96 (141)
T 3klq_A 61 GQYTYRVYQKPSQNKDYQADTTVFDVLVYVTYDEDG 96 (141)
T ss_dssp EEEEEEEEECCCSSTTEECCCCEEEEEEEEEECTTS
T ss_pred EEEEEEEEEeCCCCCCcEEcCCEEEEEEEEEECCCC
Confidence 456677765332 777788888776543
No 93
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.46 E-value=58 Score=19.39 Aligned_cols=15 Identities=20% Similarity=0.253 Sum_probs=12.4
Q ss_pred CeEEEEEEEEECCCC
Q psy11815 47 ESYFNIDIGSDLTGG 61 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~ 61 (141)
..|.|+|.|.+..+.
T Consensus 91 t~Y~frV~A~N~~G~ 105 (127)
T 2dmk_A 91 TRYIFIVKAINQAGS 105 (127)
T ss_dssp CEEEEEEEEEESSCE
T ss_pred CEEEEEEEEEeCCCC
Confidence 788899999888764
No 94
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=34.35 E-value=83 Score=19.48 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=20.8
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQ 74 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~ 74 (141)
..|.+++.|.+..+ ++++.+.++|.
T Consensus 94 GiyrVt~~AeN~~G---~d~a~l~l~Vt 118 (123)
T 1wgo_A 94 GIYRVSVRAENTAG---HDEAVLFVQVS 118 (123)
T ss_dssp SCEEEEEEEECSSC---EEEEEEEECBC
T ss_pred CEEEEEEEEEccCC---ceeEEEEEEEe
Confidence 78999999998876 67888888774
No 95
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=25.07 E-value=75 Score=17.69 Aligned_cols=14 Identities=7% Similarity=-0.354 Sum_probs=11.2
Q ss_pred CeEEEEEEEEECCC
Q psy11815 47 ESYFNIDIGSDLTG 60 (141)
Q Consensus 47 ~~y~l~v~a~d~~~ 60 (141)
..|.+.|.|....+
T Consensus 69 t~Y~v~V~A~~~~G 82 (97)
T 3qht_C 69 VDYTITVYAYYSYY 82 (97)
T ss_dssp CEEEEEEEEEEEET
T ss_pred CEEEEEEEEEeCCc
Confidence 78889998887654
No 96
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=24.98 E-value=96 Score=18.06 Aligned_cols=14 Identities=21% Similarity=0.226 Sum_probs=11.9
Q ss_pred CeEEEEEEEEECCC
Q psy11815 47 ESYFNIDIGSDLTG 60 (141)
Q Consensus 47 ~~y~l~v~a~d~~~ 60 (141)
..|.|+|.|.+..+
T Consensus 79 t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 79 AAYEFRVIAKNAAG 92 (112)
T ss_dssp CCEEEEEEEECTTS
T ss_pred CEEEEEEEEEECCC
Confidence 78999999988776
No 97
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=24.70 E-value=1.5e+02 Score=19.37 Aligned_cols=57 Identities=16% Similarity=0.039 Sum_probs=33.0
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCccCCCceEEEEecCCC---CCc-eEEEEEEEECC
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVNDNVPMTLDPVYYAQIVENQS---GIL-PIVQLAASDGD 111 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd~~P~f~~~~~~~~v~e~~~---~g~-~v~~v~a~D~D 111 (141)
..|.|+++|.|..+- .+....+.|.|.+ ..+|.. .+..+.+.. .|. .-+...|.|.|
T Consensus 61 G~htlta~A~D~aGn-~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~ 121 (190)
T 3pdd_A 61 GAYNLKAVAVLSDGR-RIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSD 121 (190)
T ss_dssp EEEEEEEEEEETTSC-EEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSS
T ss_pred ccEEEEEEEEECCCC-EeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCC
Confidence 789999999998763 1223457777776 346643 233333322 232 34556666655
No 98
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=22.05 E-value=1.9e+02 Score=19.51 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=13.8
Q ss_pred EEEEEEEECCCCCCCeEEEEEEcCC
Q psy11815 102 IVQLAASDGDLDPDQRISYKISAGN 126 (141)
Q Consensus 102 v~~v~a~D~D~~~~~~i~Y~i~~~~ 126 (141)
.=++.+.|.+ +..++|+|..++
T Consensus 117 kErL~~lDde---~~~~sYsIieG~ 138 (208)
T 3jrs_A 117 RERLDLLDDD---RRVTGFSITGGE 138 (208)
T ss_dssp EEEEEEEETT---TTEEEEEEEESS
T ss_pred EEEEEEEecc---CCEEEEEEeeCC
Confidence 3345566655 556788887764
No 99
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=21.96 E-value=1.8e+02 Score=20.31 Aligned_cols=63 Identities=11% Similarity=-0.053 Sum_probs=37.1
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCC--CCCccC---CCceEEE----------EecCCCCCceEEEEEEEECC
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND--NVPMTL---DPVYYAQ----------IVENQSGILPIVQLAASDGD 111 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd--~~P~f~---~~~~~~~----------v~e~~~~g~~v~~v~a~D~D 111 (141)
..|.+++.++|..+ .+++.+..|.|....- ..-.|. ...|... -.+-...|..-.+++++|.+
T Consensus 69 GtYtVtLTVtD~~G--~s~t~t~~ItV~~~~a~~~tv~Ftd~s~~~~~Wdfgdg~~s~~~~~~y~~~G~YtV~LtVtn~~ 146 (260)
T 2c4x_A 69 GTYKVKLIVTDNQG--ASSSFTATIKVTSATGDNSKFNFEDGTLGGFTTSGTNATGVVVNTTEKAFKGERGLKWTVTSEG 146 (260)
T ss_dssp EEEEEEEEEEETTS--CEEEEEEEEEEBCSSSCCSSBCCTTSSCTTCEEEEEEEEEEEEEESSCCSSSSCEEEEEEEEEE
T ss_pred EEEEEEEEEEeCCC--CeEEEEEEEEECCCCCcceeEEEeCCCCcceEEECCCCCCcccccceeeCCceEEEEEEEECCC
Confidence 68999999999876 3556778888876431 111221 1112211 12333457777778877775
No 100
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=21.26 E-value=1.7e+02 Score=18.80 Aligned_cols=56 Identities=9% Similarity=-0.054 Sum_probs=36.0
Q ss_pred CceeEEEEeEECCCCCCCeEEEEEecCCC------CeEEEEEEEEECCCCCCeEEEEEEEEEEeCCC
Q psy11815 18 ILPIVQLAASDGDLDPDQRISYKISAGNP------ESYFNIDIGSDLTGGPDQVYLIVYIQVQNVND 78 (141)
Q Consensus 18 g~~v~~v~a~D~D~~~n~~v~y~i~~~~~------~~y~l~v~a~d~~~~~~~~~~~v~i~V~d~Nd 78 (141)
+...-+|.+.|.+ +-.++|+|.+|+. ..|..++++...+.. .+.+..+....-.++
T Consensus 69 ~~~kErl~~iD~~---~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~g--gs~v~wt~~y~~~~~ 130 (168)
T 3rws_A 69 GSTKQHIDMVDRE---NCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEE--GCIVKSTTKYYTKGD 130 (168)
T ss_dssp CEEEEEEEEEETT---TTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTS--CEEEEEEEEEEECSS
T ss_pred eEEEEEEEEEccc---CCEEEEEEEccCcccCcCceEEEEEEEEEECCCC--ceEEEEEEEEEECCC
Confidence 4445577777765 6789999998864 456667666664422 245666666665655
No 101
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=20.97 E-value=1.4e+02 Score=17.82 Aligned_cols=24 Identities=25% Similarity=0.396 Sum_probs=18.2
Q ss_pred CeEEEEEEcCCCCCcEEEeCCCeEE
Q psy11815 116 QRISYKISAGNPESYFNIDIGSGSL 140 (141)
Q Consensus 116 ~~i~Y~i~~~~~~~~F~Id~~tG~i 140 (141)
.++.|++-..++ ..|.|.|.+|.|
T Consensus 29 ~~vaFKVKtT~p-~~y~VrP~~G~I 52 (109)
T 1row_A 29 EKIVFKIKSSNN-NEYRIAPVFGFV 52 (109)
T ss_dssp SCEEEEEEESCS-SSEEEECSEEEE
T ss_pred CeEEEEEEeCCC-CceEEcCCceEE
Confidence 468888876554 569999988876
No 102
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.30 E-value=70 Score=19.53 Aligned_cols=26 Identities=15% Similarity=-0.112 Sum_probs=19.8
Q ss_pred CeEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11815 47 ESYFNIDIGSDLTGGPDQVYLIVYIQVQN 75 (141)
Q Consensus 47 ~~y~l~v~a~d~~~~~~~~~~~v~i~V~d 75 (141)
..|.|.|.++|..+ .....++|+|+.
T Consensus 80 G~Y~FqltVtd~~~---~ge~~vnVTV~P 105 (113)
T 2e7m_A 80 GLYVFKVTVSSENA---FGEGFVNVTVKP 105 (113)
T ss_dssp EEEEECCEEEETTE---EEECCEEEEEEC
T ss_pred EEEEEEEEEECCCC---CccceEEEEEcC
Confidence 78999999999875 455667777764
Done!