BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11816
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y1A3|TIM8_DROME Mitochondrial import inner membrane translocase subunit Tim8
OS=Drosophila melanogaster GN=Tim8 PE=3 SV=1
Length = 88
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 67 DSRPESTFWIFGKPTYIETHMFEFNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSL 123
D + I + + + EFN+ICW+KC S K+D TETCL+NCV+RFID SL
Sbjct: 11 DKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSL 70
Query: 124 FITNRYGQLLSKSMEGE 140
IT R+ Q+L K G+
Sbjct: 71 LITQRFAQMLQKRGGGD 87
>sp|Q66L32|TIM8A_XENLA Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Xenopus laevis GN=timm8a PE=3 SV=1
Length = 94
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Query: 86 HMFEFNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
+ F D+CWDKC +K+DS+TE+CL +CV+RFID +L ITNR+ Q++ K
Sbjct: 39 QVHNFMDVCWDKCIDRPGNKLDSRTESCLVSCVDRFIDTTLSITNRFAQIVQKG 92
>sp|Q9Y5J9|TIM8B_HUMAN Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Homo sapiens GN=TIMM8B PE=1 SV=1
Length = 83
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Query: 90 FNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
F ++CWDKC +++DS+TE CL++CV+RFID +L IT+R+ Q++ K
Sbjct: 32 FMELCWDKCVEKPGNRLDSRTENCLSSCVDRFIDTTLAITSRFAQIVQKG 81
>sp|P62078|TIM8B_RAT Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Rattus norvegicus GN=Timm8b PE=3 SV=1
Length = 83
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 90 FNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
F ++CWDKC ++DS+TE CL++CV+RFID +L IT R+ Q++ K
Sbjct: 32 FMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITGRFAQIVQKG 81
>sp|P62077|TIM8B_MOUSE Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Mus musculus GN=Timm8b PE=3 SV=1
Length = 83
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 90 FNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
F ++CWDKC ++DS+TE CL++CV+RFID +L IT R+ Q++ K
Sbjct: 32 FMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITGRFAQIVQKG 81
>sp|Q3SZ93|TIM8B_BOVIN Mitochondrial import inner membrane translocase subunit Tim8 B
OS=Bos taurus GN=TIMM8B PE=3 SV=1
Length = 83
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Query: 90 FNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
F ++CWDKC +++DS+TE CL++CV+RFID +L IT+R+ Q++ +
Sbjct: 32 FMELCWDKCVEKPGNRLDSRTENCLSSCVDRFIDTTLAITSRFAQIVQRG 81
>sp|Q6DEM5|TIM8A_DANRE Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Danio rerio GN=timm8a PE=3 SV=1
Length = 90
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 89 EFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
+ ++CW+KC K+DS+TE C NCV RFID S FI NR Q
Sbjct: 31 QMTEVCWEKCMDKPGPKLDSRTEVCFVNCVERFIDTSQFILNRLEQ 76
>sp|Q90YI5|TIM8A_TAKRU Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Takifugu rubripes GN=timm8a PE=3 SV=1
Length = 90
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 66 ADSRPESTFWIFGKPTYIETHMFEFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVS 122
AD + + I + + + ++CWDKC K+DS+ E C NCV RFID S
Sbjct: 8 ADPQLQQFIEIESQKQRFQQLVHHMTEVCWDKCMDKPGPKLDSRAEMCFVNCVERFIDTS 67
Query: 123 LFITNRYGQ 131
FI NR Q
Sbjct: 68 QFILNRLEQ 76
>sp|Q9WVA1|TIM8A_RAT Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Rattus norvegicus GN=Timm8a PE=1 SV=1
Length = 97
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 89 EFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
+ ++CW+KC K+DS+ E C NCV RFID S FI NR Q
Sbjct: 38 QMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQFILNRLEQ 83
>sp|Q9WVA2|TIM8A_MOUSE Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Mus musculus GN=Timm8a1 PE=1 SV=1
Length = 97
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 89 EFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
+ ++CW+KC K+DS+ E C NCV RFID S FI NR Q
Sbjct: 38 QMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQFILNRLEQ 83
>sp|O60220|TIM8A_HUMAN Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Homo sapiens GN=TIMM8A PE=1 SV=1
Length = 97
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 89 EFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
+ ++CW+KC K+DS+ E C NCV RFID S FI NR Q
Sbjct: 38 QMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQFILNRLEQ 83
>sp|Q3ZBS8|TIM8A_BOVIN Mitochondrial import inner membrane translocase subunit Tim8 A
OS=Bos taurus GN=TIMM8A PE=3 SV=1
Length = 97
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 89 EFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
+ ++CW+KC K+DS+ E C NCV RFID S FI NR Q
Sbjct: 38 QMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQFILNRLEQ 83
>sp|Q4FZG7|TI8AB_MOUSE Putative mitochondrial import inner membrane translocase subunit
Tim8 A-B OS=Mus musculus GN=Timm8a2 PE=3 SV=1
Length = 97
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 86 HMFEFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYGQ 131
HM E +CW+KC ++D + E CL NCV RFID S FI NR Q
Sbjct: 38 HMTE---LCWEKCMDKPGPRLDGRAELCLVNCVERFIDTSQFILNRLEQ 83
>sp|P57744|TIM8_YEAST Mitochondrial import inner membrane translocase subunit TIM8
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM8 PE=1 SV=1
Length = 87
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 55 AIMFADLAIMFADSRPESTFWIFGKPTYIETHM--FEFNDICWDKC----QSDKVDSKTE 108
++ +DLA + S+ E ++ G+ + + M +F +IC+ KC + S+ E
Sbjct: 3 SLSTSDLASLDDTSKKEIATFLEGENSKQKVQMSIHQFTNICFKKCVESVNDSNLSSQEE 62
Query: 109 TCLTNCVNRFIDVSLFITN 127
CL+NCVNRF+D ++ I N
Sbjct: 63 QCLSNCVNRFLDTNIRIVN 81
>sp|Q616Q2|TIM8_CAEBR Mitochondrial import inner membrane translocase subunit tim-8
OS=Caenorhabditis briggsae GN=tim-8 PE=3 SV=1
Length = 83
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 94 CWDKCQSD-----KVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKS 136
CWD C SD K+D KT+TC+ NCVNR ID S F+ ++ S
Sbjct: 35 CWDVCFSDYRPPSKMDGKTQTCIQNCVNRMIDASNFMVEHLSKMNGGS 82
>sp|Q6BN23|TIM8_DEBHA Mitochondrial import inner membrane translocase subunit TIM8
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM8 PE=3 SV=1
Length = 90
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 61 LAIMFADSRPESTFWIFGK--PTYIETHMFEFNDICWDKCQSDK------VDSKTETCLT 112
LA + SR + +I + + ++ + F D+C+ KC ++K +DS E CLT
Sbjct: 9 LASLDESSRKDIMQFIESENSKSKVQMSIHNFTDMCFKKCNANKPITSGTLDSSEEQCLT 68
Query: 113 NCVNRFIDVSLFI 125
NC+NRF+D ++ +
Sbjct: 69 NCLNRFLDTNIKV 81
>sp|Q9N408|TIM8_CAEEL Mitochondrial import inner membrane translocase subunit tim-8
OS=Caenorhabditis elegans GN=tim-8 PE=3 SV=1
Length = 83
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 94 CWDKCQSD-----KVDSKTETCLTNCVNRFIDVSLFITNRYGQL 132
CWD C +D K+D KT+TC+ NCVNR ID S F+ ++
Sbjct: 35 CWDVCFADYRPPSKMDGKTQTCIQNCVNRMIDASNFMVEHLSKM 78
>sp|Q4IJW4|TIM8_GIBZE Mitochondrial import inner membrane translocase subunit TIM8
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=TIM8 PE=3 SV=1
Length = 93
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 54 LAIMFADLAIMFADSRPESTFWIFGKP--TYIETHMFEFNDICWDKC-----QSDKVDSK 106
L I ADL + R E ++ + + I+ +CW KC ++ K+D
Sbjct: 6 LNIDNADLEKLNDKDRTELRQFLANEQQRSQIQAQTHSLTQMCWSKCVPGTIKNPKLDKS 65
Query: 107 TETCLTNCVNRFIDVS 122
ETCL NCV RF+DV+
Sbjct: 66 EETCLANCVERFLDVN 81
>sp|Q59MI8|TIM8_CANAL Mitochondrial import inner membrane translocase subunit TIM8
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM8 PE=3 SV=2
Length = 88
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 80 PTYIETHMFEFNDICWDKCQSDK------VDSKTETCLTNCVNRFIDVSLFI 125
+ +++ + F D+C+ KC DK +D + E CL NC+NRF+D ++ +
Sbjct: 30 KSKVQSSIHNFTDMCFKKCNKDKPITSATLDGQEEACLKNCLNRFLDTNIKV 81
>sp|Q09783|TIM8_SCHPO Mitochondrial import inner membrane translocase subunit tim8
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim8 PE=3 SV=1
Length = 98
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 83 IETHMFEFNDICWDKCQSD---KVDSKTETCLTNCVNRFIDVSLFITNRYG 130
++ + +F CW KC + K+D E CL NCV RF+D + I RY
Sbjct: 33 LQQAIHQFTSTCWPKCIGNIGNKLDKSEEQCLQNCVERFLDCNFHIIKRYA 83
>sp|P0CR94|TIM8_CRYNJ Mitochondrial import inner membrane translocase subunit TIM8
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIM8 PE=3 SV=1
Length = 88
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 83 IETHMFEFNDICWDKCQSDKVDSK----TETCLTNCVNRFIDVSLFITNR 128
++ + E + CW+ C + + SK CL NCV+RF+D SL+I +
Sbjct: 31 LQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLYIVRQ 80
>sp|P0CR95|TIM8_CRYNB Mitochondrial import inner membrane translocase subunit TIM8
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIM8 PE=3 SV=1
Length = 88
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 83 IETHMFEFNDICWDKCQSDKVDSK----TETCLTNCVNRFIDVSLFITNR 128
++ + E + CW+ C + + SK CL NCV+RF+D SL+I +
Sbjct: 31 LQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLYIVRQ 80
>sp|Q6FK81|TIM8_CANGA Mitochondrial import inner membrane translocase subunit TIM8
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM8 PE=3 SV=1
Length = 87
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 83 IETHMFEFNDICWDKCQSDKVD-----SKTETCLTNCVNRFIDVSLFI 125
+ T + +F DIC+ KC S +VD S+ E CL +CVNRF+D ++ +
Sbjct: 33 VRTSINQFTDICFKKCIS-RVDNGNLSSQEEECLASCVNRFLDTNIRV 79
>sp|Q6CWH5|TIM8_KLULA Mitochondrial import inner membrane translocase subunit TIM8
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM8 PE=3
SV=1
Length = 87
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 55 AIMFADLAIMFADSRPESTFWIFGKPTYIETHM--FEFNDICWDKC----QSDKVDSKTE 108
+I DL+ + S+ E ++ + + + M +F ++C+ C Q+ + S+ E
Sbjct: 3 SISQNDLSNLDDGSKKEIMTFLESENSKQKVQMSIHQFTNLCFKNCISNVQNADLSSQEE 62
Query: 109 TCLTNCVNRFIDVSLFI 125
CL NCVNRF+D ++ I
Sbjct: 63 QCLNNCVNRFLDTNIRI 79
>sp|Q9Y8C0|TIM8_NEUCR Mitochondrial import inner membrane translocase subunit tim-8
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-8 PE=1 SV=1
Length = 92
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 59 ADLAIMFADSRPESTFWIFG--KPTYIETHMFEFNDICWDKC-----QSDKVDSKTETCL 111
ADL ++ + E +I + ++ D CW KC +++++D C+
Sbjct: 6 ADLDLLNEKDKNELRGFISNETQRQRVQGQTHALTDSCWKKCVTSPIKTNQLDKTEAVCM 65
Query: 112 TNCVNRFIDVSLFI 125
+CV RF+DV+L I
Sbjct: 66 ADCVERFLDVNLTI 79
>sp|Q9RUA9|LEU1_DEIRA 2-isopropylmalate synthase OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=leuA PE=3 SV=1
Length = 522
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 148 AHVTTKNNPPPGLQSHVKSVRLTLRMTEYSPGIAFKHAQK 187
A T+N P Q H++ TLR E SPG+A HAQK
Sbjct: 2 AMTQTENQTAP--QQHIRIFDTTLRDGEQSPGVALNHAQK 39
>sp|Q9XGY4|TIM8_ARATH Mitochondrial import inner membrane translocase subunit TIM8
OS=Arabidopsis thaliana GN=TIM8 PE=1 SV=1
Length = 77
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 89 EFNDICWDKCQSD----KVDSKTETCLTNCVNRFIDVSLFITNRYG 130
+ +CWDKC + K S +CLT+C R++D+S+ I R+
Sbjct: 30 KMTSVCWDKCITSAPGSKFSSSESSCLTHCAQRYMDMSMIIMKRFN 75
>sp|Q75DU7|TIM8_ASHGO Mitochondrial import inner membrane translocase subunit TIM8
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM8 PE=3 SV=1
Length = 87
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 83 IETHMFEFNDICWDKC----QSDKVDSKTETCLTNCVNRFIDVSLFI 125
++ + +F ++C+ C QS + ++ CL +CVNRF+D ++ I
Sbjct: 33 VQMSIHQFTNLCFKNCIHSVQSADLSAQENQCLKDCVNRFLDTNIRI 79
>sp|Q9VTN3|TIM13_DROME Mitochondrial import inner membrane translocase subunit Tim13
OS=Drosophila melanogaster GN=Tim13 PE=3 SV=1
Length = 92
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 89 EFNDICWDKC---QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSK 135
+ + C+ KC +DS + C++ C++RF+D ++ YG L +
Sbjct: 30 KMTEKCFKKCIQKPGKSLDSTEQRCISQCMDRFMDAWNLVSRTYGNRLQR 79
>sp|Q17754|TIM9_CAEEL Mitochondrial import inner membrane translocase subunit Tim9
OS=Caenorhabditis elegans GN=tin-9.1 PE=3 SV=1
Length = 90
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 92 DICWDKC----QSDKVDSKTETCLTNCVNRFIDVSLFITNRYG--QLLSKSMEGERARV 144
+ C++ C S V K E+C NC+++F+ ++ ++ R+ QLL+ G +V
Sbjct: 22 EQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQEHQLLNAQANGAAIKV 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,181,584
Number of Sequences: 539616
Number of extensions: 2761692
Number of successful extensions: 6396
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6349
Number of HSP's gapped (non-prelim): 32
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)