RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11816
         (209 letters)



>d2bska1 g.83.1.1 (A:13-85) Mitochondrial import inner membrane
           translocase subunit Tim9 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 73

 Score = 56.0 bits (135), Expect = 1e-11
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 90  FNDICWDKCQSD----KVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSKSMEG 139
             + C+  C  D    +V  +  TC  +C+ +++ ++  I+ R+ +   +  E 
Sbjct: 12  LTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEA 65


>d2bskb1 g.83.1.1 (B:13-77) Mitochondrial import inner membrane
           translocase subunit Tim10 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 65

 Score = 53.6 bits (129), Expect = 8e-11
 Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 6/57 (10%)

Query: 85  THMFE-FNDICWDKC-----QSDKVDSKTETCLTNCVNRFIDVSLFITNRYGQLLSK 135
             M+      C  KC     +  ++      CL  CV++++D+   +  +  +L  +
Sbjct: 7   ADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQ 63


>g1r8o.1 b.42.4.1 (A:,B:) Two-chain trypsin inhibitor {Balsam
           copaiba (Copaifera langsdorffii) [TaxId: 280048]}
          Length = 167

 Score = 27.5 bits (61), Expect = 0.84
 Identities = 7/48 (14%), Positives = 13/48 (27%), Gaps = 4/48 (8%)

Query: 38  TFWIFGKPTYIDTHADLAIMFADLAIMFADSRPESTFWIFGKPTYIET 85
            F    +  YI     L I   +         P+ + W       + +
Sbjct: 58  RFKASPRSKYISVGMLLGIEVIESPEC----APKPSMWSVKSGWKLPS 101


>d1avwb_ b.42.4.1 (B:) Soybean trypsin inhibitor {Soybean (Glycine
          max) [TaxId: 3847]}
          Length = 177

 Score = 26.0 bits (57), Expect = 2.9
 Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 1/43 (2%)

Query: 38 TFWIFGKPTYIDTHADLAIMFADLAIMFADSRPESTFWIFGKP 80
                +  +I     L++ F   A++        T W   + 
Sbjct: 57 IISSPYRIRFIAEGHPLSLKFDSFAVI-MLCVGIPTEWSVVED 98


>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli
           [TaxId: 562]}
          Length = 269

 Score = 25.0 bits (53), Expect = 7.6
 Identities = 20/118 (16%), Positives = 34/118 (28%)

Query: 47  YIDTHADLAIMFADLAIMFADSRPESTFWIFGKPTYIETHMFEFNDICWDKCQSDKVDSK 106
            I+ H   ++  +D A  F D    +   I GK + +  H+    D C     S     +
Sbjct: 3   LINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQ 62

Query: 107 TETCLTNCVNRFIDVSLFITNRYGQLLSKSMEGERARVTCCAHVTTKNNPPPGLQSHV 164
            E  +        +  L +    G              T    VT        L++  
Sbjct: 63  LEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEG 120


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0604    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 771,921
Number of extensions: 33197
Number of successful extensions: 123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 11
Length of query: 209
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 128
Effective length of database: 1,295,466
Effective search space: 165819648
Effective search space used: 165819648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (23.7 bits)