BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11818
(331 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 345 bits (884), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/233 (71%), Positives = 196/233 (84%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+GP ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNREK T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 8/67 (11%)
Query: 267 IKKRIESLIEREYLARTPED------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKN 320
+KK ++ L E+E T D RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKN
Sbjct: 396 LKKGVKGLTEQE--VETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKN 453
Query: 321 MISKLKV 327
MISKLK
Sbjct: 454 MISKLKT 460
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 345 bits (884), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 167/233 (71%), Positives = 196/233 (84%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+GP ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNREK T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 8/67 (11%)
Query: 267 IKKRIESLIEREYLARTPED------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKN 320
+KK ++ L E+E T D RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKN
Sbjct: 396 LKKGVKGLTEQE--VETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKN 453
Query: 321 MISKLKV 327
MISKLK
Sbjct: 454 MISKLKT 460
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/233 (71%), Positives = 196/233 (84%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+GP ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNREK T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 8/67 (11%)
Query: 267 IKKRIESLIEREYLARTPED------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKN 320
+KK ++ L E+E T D RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKN
Sbjct: 396 LKKGVKGLTEQE--VETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKN 453
Query: 321 MISKLKV 327
MISKLK
Sbjct: 454 MISKLKT 460
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 344 bits (883), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 167/233 (71%), Positives = 196/233 (84%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+GP ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNREK T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKNMISKLK
Sbjct: 420 RFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKT 460
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/233 (71%), Positives = 196/233 (84%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+GP ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNR+K T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKNMISKLK
Sbjct: 420 RFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKT 460
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 342 bits (876), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/233 (71%), Positives = 195/233 (83%), Gaps = 3/233 (1%)
Query: 57 HIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGP-RREEGEGKDGASSSTSPPAPR 115
H F I+ RFYLAKHSGRQLTLQ MGSADLNA F+G ++E+G + + R
Sbjct: 530 HAFEIFR-RFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTR 588
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP 175
KHI+QVST+QM +L+LFNNREK T+EEIQ ETDIPER+L+RALQSLA GK +QR+L + P
Sbjct: 589 KHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEP 648
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAK-GESEPERRETRSKVDEDRKHEIEAAVV 234
K+KEIE H+F VND FTSKLHRVKIQTVAAK GES+PER+ETR KVD+DRKHEIEAA+V
Sbjct: 649 KSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIV 708
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDR 287
RIMK+RK+MQHN L+ EVT+QLK+RFLPSPV+IKKRIE LIEREYLARTPEDR
Sbjct: 709 RIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDR 761
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 39/41 (95%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
RF+QEKDVFERYYKQHLA+RLL +KSVSDDSEKNMISKLK
Sbjct: 420 RFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKT 460
>sp|Q17391|CUL3_CAEEL Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Length = 777
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 163/229 (71%), Gaps = 7/229 (3%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGP------RREEGEGKDGASSSTSPPAPRKHI 118
++Y KH+GR+LT+ +G+AD+ A F+ P E G G + S P I
Sbjct: 541 QYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKI 600
Query: 119 IQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTK 178
+QV+T+QM +LL FN+ +++ +++ E IPER+L R LQSLA+GKASQRIL+R K K
Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660
Query: 179 E-IEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIM 237
+ I+ + F VND+F SKL RVK+Q V K ESEPE RETR KV++DRK E+EAA+VRIM
Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720
Query: 238 KARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
KARK++ HN L+ EVT+QL+ RF+PSP+IIK+RIE+LIEREYLAR D
Sbjct: 721 KARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHD 769
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
R+LQEKDVFE+Y+KQ+LAKRLLLDKS SDD EK +++KLK
Sbjct: 426 RYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKT 466
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 156/224 (69%), Gaps = 21/224 (9%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
+YL H+GR+L+ Q MG+AD+ A+F G+G+ KH + VST+Q
Sbjct: 525 YYLGTHTGRRLSWQTNMGTADIKAIF-------GKGQ-------------KHELNVSTFQ 564
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
MCVL+LFNN ++L+Y+EI+ T+IP DL R LQSLA K + ++ + P +K+I +
Sbjct: 565 MCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKG-KNVIKKEPMSKDIGEEDL 623
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F VND FTSK ++VKI TV A+ E+EPE++ETR +V+EDRK +IEAA+VRIMK+RK + H
Sbjct: 624 FVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDH 683
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFL 289
N +I EVT+QL+ RFL +P IKKRIESLIER++L R DR L
Sbjct: 684 NNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKL 727
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
R+LQEKDVFE+YYKQHLAKRLL K+VSDD+E+++I KLK
Sbjct: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKT 451
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 23 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEVHIFSIYPLRFYLAKHSGR 74
+YL H+GR+L+ Q MG+AD+ A+F ++ E+++ + L +S R
Sbjct: 525 YYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDR 576
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 155/224 (69%), Gaps = 21/224 (9%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
+YL H+GR+L+ Q MG+AD+ AVF G+G+ KH + VST+Q
Sbjct: 525 YYLGTHTGRRLSWQTNMGTADIKAVF-------GKGQ-------------KHELNVSTFQ 564
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
MCVL+LFNN ++L+Y+EI+ T+IP DL R LQS+A K + +L + P +KEI
Sbjct: 565 MCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKG-KNVLRKEPMSKEIAEEDW 623
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F VND F SK ++VKI TV A+ E+EPE++ETR +V+EDRK +IEAA+VRIMK+R+ + H
Sbjct: 624 FVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDH 683
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFL 289
N +I EVT+QL++RFL +P IKKRIESLIER++L R DR L
Sbjct: 684 NNIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKL 727
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 37/40 (92%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R+LQEKDVFE+YYKQHLAKRLL K+VSDD+E+N+I KLK
Sbjct: 411 RYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLK 450
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 23 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEVHIFSIYPLRFYLAKHSGR 74
+YL H+GR+L+ Q MG+AD+ AVF ++ E+++ + L +S R
Sbjct: 525 YYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLMLFNNSDR 576
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 148/256 (57%), Gaps = 58/256 (22%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
+YL+ H+GR L Q MG+A++ A F P+ + H +QVS+YQ
Sbjct: 531 YYLSNHNGRLLLWQTNMGTAEIKANF--------------------PS-KSHELQVSSYQ 569
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIR------------ 173
M +LLLFN++ KLT++EI +T IP DL R L LA+ +IL R
Sbjct: 570 MVILLLFNDQSKLTFKEIADQTGIPTIDLKRNL--LALTNPKNKILDRELPSTTSSTTTT 627
Query: 174 ----------------------YPKTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESE 211
+K I+ + VF N F SKL RVK+ V K E+
Sbjct: 628 TTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQK-ETP 686
Query: 212 PERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRI 271
E +ETR KVDEDRKH+IEA++VRIMKARK ++H+ L++EV +QL+SRF+P+PVI+KKRI
Sbjct: 687 VEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRI 746
Query: 272 ESLIEREYLARTPEDR 287
ESLIEREYL R+ +DR
Sbjct: 747 ESLIEREYLERSKQDR 762
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 38/40 (95%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R +QEKDVFE+YYKQHLAKRLLL +S+SDD+E+NMI+KLK
Sbjct: 415 RLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLK 454
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 137/225 (60%), Gaps = 27/225 (12%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FYL+KH+GR+L P MGSAD+ F KD RK+ + VST
Sbjct: 576 FYLSKHTGRKLLWYPSMGSADVRVNF----------KD-----------RKYDLNVSTIA 614
Query: 126 MCVLLLFNN---REKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEP 182
+LLLF + + L +EEI +T+I DL R LQSLA K +IL++ PK +E+
Sbjct: 615 SVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAK--YKILLKDPKGREVNA 672
Query: 183 NHVFFVNDSFTSKLHRVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARK 241
F+ N++F S L R+KI TVA + E + ER+ T KVDE RKH+ +A +VR+MK RK
Sbjct: 673 GDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRK 732
Query: 242 RMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
+HN L+ EVT QL RF PSP++IK+RIE+LIEREYL R ++
Sbjct: 733 VCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADN 777
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 268 KKRIESLIEREYLARTPEDRFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+K IE IE RF+ EKDVFE+YYK HLAKRLL ++S+S D+E MIS+LK
Sbjct: 438 RKAIEGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLK 496
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 8 VNFGLVLRLENDLFK-FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEVHIFSI 61
NF VL + D F FYL+KH+GR+L P MGSAD+ V F R+ ++++ +I
Sbjct: 560 CNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVR-VNFKDRKYDLNVSTI 613
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 129/221 (58%), Gaps = 26/221 (11%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FYL KHSGR+L Q +G L A F ++E +QVS +Q
Sbjct: 711 FYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKE---------------------LQVSLFQ 749
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
VLL+FN E+ + EEI+ T I + +L R LQSLA GKA R+L + PK K+IE
Sbjct: 750 TLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA--RVLAKNPKGKDIEDGDK 807
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F ND F KL R+KI + K E+ E+ T +V +DR+++I+AA+VRIMK RK + H
Sbjct: 808 FICNDDFKHKLFRIKINQIQMK-ETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH 866
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
N L++EV QLK F P +KKRIESLI+R+Y+ R E+
Sbjct: 867 NLLVSEVYNQLK--FPVKPADLKKRIESLIDRDYMERDKEN 905
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
RF+ KDVFE +YK+ LAKRLL+ KS S D+EK+M+SKLK
Sbjct: 595 RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 634
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 19 DLFK-FYLAKHSGRQLTLQPQMGSADLNAVFFGPRRE-EVHIFSIYPLRFYLAKHSGRQL 76
++FK FYL KHSGR+L Q +G L A F ++E +V +F L + + G +
Sbjct: 706 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMF---NEGEEF 762
Query: 77 TLQ 79
+L+
Sbjct: 763 SLE 765
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 129/221 (58%), Gaps = 26/221 (11%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FYL KHSGR+L Q +G L A F ++E +QVS +Q
Sbjct: 768 FYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKE---------------------LQVSLFQ 806
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
VLL+FN E+ + EEI+ T I + +L R LQSLA GKA R+L + PK K+IE
Sbjct: 807 TMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGKA--RVLAKNPKGKDIEDGDK 864
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F ND F KL R+KI + K E+ E+ T +V +DR+++I+AA+VRIMK RK + H
Sbjct: 865 FICNDDFKHKLFRIKINQIQMK-ETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH 923
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
N L++EV QLK F P +KKRIESLI+R+Y+ R E+
Sbjct: 924 NLLVSEVYNQLK--FPVKPADLKKRIESLIDRDYMERDKEN 962
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
RF+ KDVFE +YK+ LAKRLL+ KS S D+EK+M+SKLK
Sbjct: 652 RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 691
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 19 DLFK-FYLAKHSGRQLTLQPQMGSADLNAVFFGPRRE-EVHIFSIYPLRFYLAKHSGRQL 76
++FK FYL KHSGR+L Q +G L A F ++E +V +F L + + G +
Sbjct: 763 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMF---NEGEEF 819
Query: 77 TLQ 79
+L+
Sbjct: 820 SLE 822
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 129/221 (58%), Gaps = 26/221 (11%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FYL KHSGR+L Q +G A L A F ++E QVS +Q
Sbjct: 557 FYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKE---------------------FQVSLFQ 595
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
VLL+FN + ++EEI+ T I + +L R LQSLA GKA R+LI+ PK KE+E
Sbjct: 596 TLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKA--RVLIKSPKGKEVEDGDK 653
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F N F KL R+KI + K E+ E+ T +V +DR+++I+AA+VRIMK RK + H
Sbjct: 654 FIFNGEFKHKLFRIKINQIQMK-ETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGH 712
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
N L++E+ QLK F P +KKRIESLI+R+Y+ R ++
Sbjct: 713 NLLVSELYNQLK--FPVKPGDLKKRIESLIDRDYMERDKDN 751
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
RF+ KDVFE +YK+ LAKRLL+ KS S D+EK+M+SKLK
Sbjct: 441 RFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 480
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 13 VLRLENDLFKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRRE-EVHIFSIYPLRFY 67
+++L+ FYL KHSGR+L Q +G A L A F ++E +V +F L +
Sbjct: 547 MIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMF 602
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 127/217 (58%), Gaps = 26/217 (11%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FYL KHSGR+L Q +G A L A F ++E QVS +Q
Sbjct: 557 FYLGKHSGRKLQWQTTLGHAVLKADFKEGKKE---------------------FQVSLFQ 595
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
VLL+FN + ++EEI+ T I + +L R LQSLA GKA R+LI+ PK KE+E
Sbjct: 596 TLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKA--RVLIKSPKGKEVEDGDK 653
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
F N F KL R+KI + K E+ E+ T +V +DR+++I+AA+VRIMK RK + H
Sbjct: 654 FIFNADFKHKLFRIKINQIQMK-ETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGH 712
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLAR 282
N L++E+ QLK F P +KKRIESLI+R+Y+ R
Sbjct: 713 NLLVSELYNQLK--FPVKPGDLKKRIESLIDRDYMER 747
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
RF+ KDVFE +YK+ LAKRLL+ KS S D+EK+M+SKLK
Sbjct: 441 RFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 480
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 13 VLRLENDLFKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRRE-EVHIFSIYPLRFY 67
++RL+ FYL KHSGR+L Q +G A L A F ++E +V +F L +
Sbjct: 547 MVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMF 602
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 26/228 (11%)
Query: 55 EVHIFSIYPLRFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAP 114
E++++ FYL+K+SGR+L Q +G L A F ++E
Sbjct: 579 ELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKE----------------- 621
Query: 115 RKHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRY 174
+ VS +Q VL+LFN+ KL++E+I+ T I +++L R LQSLA GK R+L +
Sbjct: 622 ----LAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTLQSLACGKV--RVLQKN 675
Query: 175 PKTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVV 234
PK +++E F ND F + L+R+K+ + K E+ E T +V +DR+++I+AA+V
Sbjct: 676 PKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQYQIDAAIV 734
Query: 235 RIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLAR 282
RIMK RK + H LITE+ +QLK F P +KKRIESLI+REYL R
Sbjct: 735 RIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLER 780
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
RF+Q KDVFE +YK+ LAKRLLL KS S D+EK+MISKLK
Sbjct: 473 RFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKT 513
Score = 35.0 bits (79), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 14 LRLENDLFK-FYLAKHSGRQLTLQPQMGSADLNAVFFGPRRE-EVHIFSIYPLRFY 67
L + D+FK FYL+K+SGR+L Q +G L A F ++E V +F L +
Sbjct: 580 LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLF 635
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 41/266 (15%)
Query: 21 FKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREE--VHIFSIYPLRFYLAKHSGRQLTL 78
F+ Y+ + LT P ++ F P+ E V +F + FY SGR+LT
Sbjct: 507 FQIYVLQAGAWPLTQAP-------SSTFAIPQELEKSVQMFEL----FYSQHFSGRKLTW 555
Query: 79 QPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQMCVLLLFNNREKL 138
+ + ++ + G + ++ V+TYQM VLL FNN E +
Sbjct: 556 LHYLCTGEVKMNYLG---------------------KPYVAMVTTYQMAVLLAFNNSETV 594
Query: 139 TYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKE-IEPNHVFFVNDSFTSKLH 197
+Y+E+Q T + E++L + ++SL K +I + KE I+ F +N SF+SK
Sbjct: 595 SYKELQDSTQMNEKELTKTIKSLLDVK-----MINHDSEKEDIDAESSFSLNMSFSSKRT 649
Query: 198 RVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLK 257
+ KI T + + ++ E +TRS VDEDRK ++AA+VRIMKARK ++HN LI EV Q +
Sbjct: 650 KFKI-TTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSR 708
Query: 258 SRFLPSPVIIKKRIESLIEREYLART 283
+RF PS +IKK IE LI+++Y+ R+
Sbjct: 709 ARFNPSISMIKKCIEVLIDKQYIERS 734
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++ +KDVF+++Y + LAKRL+ S+S DSE+ MI+KLK
Sbjct: 423 KYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK 462
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 41/266 (15%)
Query: 21 FKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREE--VHIFSIYPLRFYLAKHSGRQLTL 78
F+ Y+ + LT P ++ F P+ E V +F + FY SGR+LT
Sbjct: 507 FQIYVLQAGAWPLTQAP-------SSTFAIPQELEKSVQMFEL----FYSQHFSGRKLTW 555
Query: 79 QPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQMCVLLLFNNREKL 138
+ + ++ + G + ++ V+TYQM VLL FNN E +
Sbjct: 556 LHYLCTGEVKMNYLG---------------------KPYVAMVTTYQMAVLLAFNNSETV 594
Query: 139 TYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKE-IEPNHVFFVNDSFTSKLH 197
+Y+E+Q T + E++L + ++SL K +I + KE I+ F +N +F+SK
Sbjct: 595 SYKELQDSTQMNEKELTKTIKSLLDVK-----MINHDSEKEDIDAESSFSLNMNFSSKRT 649
Query: 198 RVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLK 257
+ KI T + + ++ E +TRS VDEDRK ++AA+VRIMKARK ++HN LI EV Q +
Sbjct: 650 KFKI-TTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSR 708
Query: 258 SRFLPSPVIIKKRIESLIEREYLART 283
+RF PS +IKK IE LI+++Y+ R+
Sbjct: 709 ARFNPSISMIKKCIEVLIDKQYIERS 734
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++ +KDVF+++Y + LAKRL+ S+S DSE+ MI+KLK
Sbjct: 423 KYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK 462
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 41/266 (15%)
Query: 21 FKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREE--VHIFSIYPLRFYLAKHSGRQLTL 78
F+ Y+ + LT P ++ F P+ E V +F + FY SGR+LT
Sbjct: 507 FQIYVLQAGAWPLTQAP-------SSTFAIPQELEKSVQMFEL----FYSQHFSGRKLTW 555
Query: 79 QPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQMCVLLLFNNREKL 138
+ + ++ + G + ++ V+TYQM VLL FNN E +
Sbjct: 556 LHYLCTGEVKMNYLG---------------------KPYVAMVTTYQMAVLLAFNNSETV 594
Query: 139 TYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKE-IEPNHVFFVNDSFTSKLH 197
+Y+E+Q T + E++L + ++SL K +I + KE I+ F +N +F+SK
Sbjct: 595 SYKELQDSTQMNEKELTKTIKSLLDVK-----MINHDSEKEDIDAESSFSLNMNFSSKRT 649
Query: 198 RVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLK 257
+ KI T + + ++ E +TRS VDEDRK ++AA+VRIMKARK ++HN LI EV Q +
Sbjct: 650 KFKI-TTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSR 708
Query: 258 SRFLPSPVIIKKRIESLIEREYLART 283
+RF PS +IKK IE LI+++Y+ R+
Sbjct: 709 ARFNPSISMIKKCIEVLIDKQYIERS 734
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++ +KDVF+++Y + LAKRL+ S+S DSE+ MI+KLK
Sbjct: 423 KYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK 462
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 30/222 (13%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHI-IQVSTY 124
FY K R+LT +G+ +N F +K I + VSTY
Sbjct: 538 FYETKTKHRKLTWIYSLGTCHINGKF----------------------DQKAIELIVSTY 575
Query: 125 QMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNH 184
Q VLLLFN +KL+Y EI ++ ++ DL+R L SL+ K +IL++ P TK + N
Sbjct: 576 QAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKY--KILLKEPNTKTVSQND 633
Query: 185 VFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQ 244
F N FT ++ R+KI ER++ VD+DR++ I+AA+VRIMK+RK +
Sbjct: 634 AFEFNSKFTDRMRRIKIPLPPV-----DERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLG 688
Query: 245 HNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
H L++E EQL F P IKKR+E LI R+YL R E+
Sbjct: 689 HQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKEN 730
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 32/39 (82%)
Query: 288 FLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
++ +KD+F +Y++ LA+RLL D+S +DD E+++++KLK
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLK 460
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 128/227 (56%), Gaps = 27/227 (11%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
+FYL+K G++++ +G + A F P K + +S +
Sbjct: 528 KFYLSKQVGKKISWYASLGHCIVKARF--------------------PLGNKEL-SISLF 566
Query: 125 QMCVLLLFNNR---EKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIE 181
Q CVLL FNN E ++Y++++ T++ + DL R LQSL+ + R L+ PK+K+
Sbjct: 567 QACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARI--RPLVMVPKSKKPS 624
Query: 182 PNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARK 241
P+ +F+VN+ FT KL+RVKI + K E + E + + +V DR+ E++A++VR+MK ++
Sbjct: 625 PDTMFYVNEKFTDKLYRVKINQIYLKEERQ-ENSDVQEQVVRDRQFELQASIVRVMKQKE 683
Query: 242 RMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRF 288
+M+H+ L+ V +K R +P +K IE L+E+EYL R D +
Sbjct: 684 KMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLEREDNDIY 730
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R++ KD+FE YYK +AKRLLL+KS S +E ++ LK
Sbjct: 415 RYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLK 454
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 7/166 (4%)
Query: 121 VSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEI 180
VSTYQ VLLLFNN E+L+Y EI + ++ DL+R L SL+ K +ILI+ P ++ I
Sbjct: 555 VSTYQAAVLLLFNNAERLSYTEISEQLNLSHEDLVRLLHSLSCLK--YKILIKEPMSRTI 612
Query: 181 EPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKAR 240
F N FT K+ ++++ ER++ VD+DR++ I+AA+VRIMK+R
Sbjct: 613 SKTDTFEFNSKFTDKMRKIRVPLPPM-----DERKKVVEDVDKDRRYAIDAALVRIMKSR 667
Query: 241 KRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
K + H L++E E L F P +IKKRIE LI R+YL R E+
Sbjct: 668 KVLAHQQLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTEN 713
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 7/168 (4%)
Query: 119 IQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTK 178
I V+TYQ VLLLFNN E+L+Y EI + ++ DL R L SL+ K +ILI+ P ++
Sbjct: 574 IVVTTYQAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLK--YKILIKEPMSR 631
Query: 179 EIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMK 238
I F N FT K+ R+++ ER++ VD+DR++ I+AA+VRIMK
Sbjct: 632 NISNTDTFEFNSKFTDKMRRIRVPLPPMD-----ERKKIVEDVDKDRRYAIDAALVRIMK 686
Query: 239 ARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
+RK + H L++E E L F P +IKKRIE LI R+YL R ++
Sbjct: 687 SRKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDN 734
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 29/39 (74%)
Query: 288 FLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
++ +KD+F ++++ A+RLL D++ +D E+++++K K
Sbjct: 426 YISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFK 464
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 36/267 (13%)
Query: 36 QPQMGSADLNAVFFG-------PRREEVHI-FSIYPL-----RFYLAKHSGRQLTLQPQM 82
Q + G+ D +A+ G P H+ + PL +Y + H+GR+L+ +
Sbjct: 521 QSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHL 580
Query: 83 GSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQMCVLLLFNNREKLTYEE 142
++ A +P ++ QVSTYQM VLLL+N+R+ TYEE
Sbjct: 581 SKGEIKA------------------RINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEE 622
Query: 143 IQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHVFFVNDSFTSKLHRVKIQ 202
+ T + D + + ++ + KA ++L+ K +PN + +N++F K RV++
Sbjct: 623 LAKITGLS-TDFLTGILNIFL-KA--KVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLN 678
Query: 203 TVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLP 262
+ + E + E ET ++EDRK +++A+VRIMKAR+ ++H L+ E +Q+KSRF P
Sbjct: 679 -LPIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTP 737
Query: 263 SPVIIKKRIESLIEREYLARTPEDRFL 289
IK+ I+ LIE+EYL R D ++
Sbjct: 738 KVSDIKQCIDMLIEKEYLERQGRDEYI 764
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R++++KDVF+ +Y + LAKRL+ S S D+E +M+SKLK
Sbjct: 449 RYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLK 488
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 61/260 (23%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
+FYL+KH+G+ L Q + L A F ++E + VS +
Sbjct: 564 KFYLSKHNGKTLKWQNALSYCVLKANFIQGKKE---------------------LSVSLF 602
Query: 125 QMCVLLLFNN---REKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIR-------- 173
Q +L LFN+ +L++ +IQ+ T + +L + L SL K+ ILI+
Sbjct: 603 QTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSD--ILIQKKSSTSSN 660
Query: 174 ------------------------YPKTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGE 209
KTK I+ F N F+SKL ++K+ ++ + E
Sbjct: 661 TSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQ-E 719
Query: 210 SEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKK 269
+ E ++T + DR+++++AA+VRIMK RK + HN LI+E+ LK F P PV +KK
Sbjct: 720 TVEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLK--FQPKPVDLKK 777
Query: 270 RIESLIEREYLARTPEDRFL 289
RIE LIE+EYL R PE+ +
Sbjct: 778 RIEILIEKEYLCRDPENAMI 797
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R++Q KDVFE +YKQ L+KRLLLDKS S D+EK+MISKLK
Sbjct: 450 RYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEKSMISKLK 489
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 31/229 (13%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY +H R + + SA ++A F P +K +I + YQ
Sbjct: 627 FYRVQHGNRNVKWHHGLASAVISASF-------------------RPGCKKELI-ATMYQ 666
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPK--------T 177
+LLLFN E T EI T I E ++++ + +L G+ ++L R T
Sbjct: 667 TVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGT 726
Query: 178 KEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIM 237
E N F VN FT K RV+I V K + E +E + +V+ DR+++I+AAVVRIM
Sbjct: 727 VENLKNEKFVVNSKFTEKRCRVRIAQVNIK-TAVEETKEVKEEVNSDRQYKIDAAVVRIM 785
Query: 238 KARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
KARK++ H TL+TE+ +QL RF S IKKR+ESLIEREY++R PE+
Sbjct: 786 KARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEE 832
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKV 327
R+L+ KDVFE YYK+ LAKRL L++S S D+EK ++ KLK
Sbjct: 512 RYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKT 552
>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1
Length = 770
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 114/220 (51%), Gaps = 25/220 (11%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
+FY +HSGR+L + +L + K G + +Q STY
Sbjct: 562 KFYQNQHSGRKLNWLHHLSKGELKTKYLQT------SKSG------------YTLQCSTY 603
Query: 125 QMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYP--KTKEIEP 182
Q+ VLL FN E LT EEIQ T + + L L SLA K IL+ P +EI
Sbjct: 604 QIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLAKSK----ILLADPPLDDEEIAK 659
Query: 183 NHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKR 242
F +N F +K ++ I V + + E V+EDRK +I+AA+VRIMK RK+
Sbjct: 660 TTKFSLNKQFKNKKTKIFIN-VPVLTQVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQ 718
Query: 243 MQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLAR 282
+ H+ L+TEV QL++RF P IIKK I+ LIE+EYL R
Sbjct: 719 LAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMR 758
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++++KDVF+ +Y + LAKRL+ S S+D E MI KLK
Sbjct: 445 KYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLK 484
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 111/217 (51%), Gaps = 23/217 (10%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY A+HSGR+L QM +L R +SST + +Q ST+Q
Sbjct: 569 FYAARHSGRKLNWLYQMCKGEL---IMNVNRN--------NSST-------YTLQASTFQ 610
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNHV 185
M VLL FN++ T +++Q T + +LI+ LQ L K +L + P
Sbjct: 611 MSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK----VLTSSDNENSLTPEST 666
Query: 186 FFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQH 245
+ + +K R+ I K E + E+ ++EDRK I+AA+VRIMK RKR+ H
Sbjct: 667 VELFLDYKNKKRRININQ-PLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNH 725
Query: 246 NTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLAR 282
LI+EV QL +RF P +IKK I+ LIE+EYL R
Sbjct: 726 TNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLER 762
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 263 SPVIIKKRIESLIEREYLARTPEDR--------------FLQEKDVFERYYKQHLAKRLL 308
SP ++ K + L+++ ++ PED+ ++++KDVF++YY + LAKRL+
Sbjct: 417 SPELLAKYCDLLLKKS--SKNPEDKELEDNLNQVMVVFKYIEDKDVFQKYYSKMLAKRLV 474
Query: 309 LDKSVSDDSEKNMISKLK 326
S SDD+E MISKLK
Sbjct: 475 NHTSASDDAEAMMISKLK 492
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 33/235 (14%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
+FY K +GR+LT V+ R E TS P+K++ +T
Sbjct: 573 QFYNEKFNGRRLTW-----------VYSQSRGE----------ITSTAFPKKYVFTATTA 611
Query: 125 QMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMG---KASQRILIRYPKTKEIE 181
QMC +LLFN ++ T E+I + T + E+ + SL KA + K E+
Sbjct: 612 QMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTEL----QKEDEVP 667
Query: 182 PNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARK 241
+N ++ +K RV + K ++ + + V+EDRK I A +VRIMK RK
Sbjct: 668 MTATVSLNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRK 727
Query: 242 RMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFLQEKDVFE 296
R+QH L+TEV QL RF P +IK+ I SLIE+EY+ RT +KD++E
Sbjct: 728 RVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTE-----GQKDLYE 777
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++ +KDVF ++Y + +KRL+ + S SD++E N I+KLK
Sbjct: 458 KYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLK 497
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 27/222 (12%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
+FY KH+GR+LT M D+ + ++++ Q+ Y
Sbjct: 649 KFYTGKHNGRKLTWLFNMSQGDVRLTYLD---------------------KQYVAQMYVY 687
Query: 125 QMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTKEIEPNH 184
QM LL F R+ + ++I E + L++ ++++ + + + + +
Sbjct: 688 QMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTIL------DVTLLTCDDQNLTADS 741
Query: 185 VFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQ 244
+ +N S TSK + ++Q E E+ + V +DRK+ +E A+VRIMK RK ++
Sbjct: 742 LVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLK 801
Query: 245 HNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
HN L+TE+ +Q K RF P IKK IE LIE+ Y+ RT ++
Sbjct: 802 HNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN 843
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
R++++KD+F+++Y + LA RL+ S+S D+E+ MI+KLK
Sbjct: 516 RYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLK 555
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 62/261 (23%)
Query: 65 RFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTY 124
++Y +H GR+L + A+ + F A + + QV+ +
Sbjct: 534 QYYSTQHQGRKLNWLHHLCKAEAKSFF---------------------AKKSYDFQVTNF 572
Query: 125 QMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPK-------- 176
Q+ +LL+FN +E ++ EEI T++ E +L R LQSL K ILI K
Sbjct: 573 QLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAK----ILISKKKDQNSINNN 628
Query: 177 --------------------TKEIEP------NHVFFVNDSFTSKLHRVKIQTVAAKGES 210
++P + VN ++++K +VK+ + K E+
Sbjct: 629 NNNNNNNNNNGEGNNSLVDSANNMQPSSSSSSTQEYTVNSAYSNKRSKVKVSSSLQK-ET 687
Query: 211 EPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKR 270
+ ET +DEDRK ++A++VRIMKARK M H +LI EV E + RF P+ +IKK
Sbjct: 688 PLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKC 747
Query: 271 IESLIEREYLART--PEDRFL 289
IE LIE+EY+ R DR+L
Sbjct: 748 IEQLIEKEYITRAEGESDRYL 768
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++ +KDVF+++Y + L++RL+ SVSDD EK MI+ LK
Sbjct: 417 KYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLK 456
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 36/235 (15%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY ++HSGR+LT Q+ +L F R + +Q ST+Q
Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNR---------------------YTLQASTFQ 607
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTK-----EI 180
M +LL +N + T +++ T I L + LQ L K +L+ + E+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSK----LLVLEDENANVDEVEL 663
Query: 181 EPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKAR 240
+P+ + + + +K RV I V K E + E+ T ++EDRK I+AA+VRIMK R
Sbjct: 664 KPDTLIKLYLGYKNKKLRVNI-NVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMR 722
Query: 241 KRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFLQEKDVF 295
K ++H L+ EV QL SRF P +IKK I+ LIE+EYL R EKD +
Sbjct: 723 KVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD-----GEKDTY 772
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 20/108 (18%)
Query: 233 VVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED------ 286
V + KA R +N +T++ Q S+ SP ++ + +SL+++ ++ PE+
Sbjct: 392 VAALDKACGRFINNNAVTKMA-QSSSK---SPELLARYCDSLLKKS--SKNPEEAELEDT 445
Query: 287 --------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++++KDVF+++Y + LAKRL+ S SDD+E +MISKLK
Sbjct: 446 LNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLK 493
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 36/235 (15%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY ++HSGR+LT Q+ +L F R + +Q ST+Q
Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNR---------------------YTLQASTFQ 607
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTK-----EI 180
M +LL +N + T +++ T I L + LQ L K +L+ + E+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSK----LLVLEDENANVDEVEL 663
Query: 181 EPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKAR 240
+P+ + + + +K RV I V K E + E+ T ++EDRK I+AA+VRIMK R
Sbjct: 664 KPDTLIKLYLGYKNKKLRVNI-NVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMR 722
Query: 241 KRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFLQEKDVF 295
K ++H L+ EV QL SRF P +IKK I+ LIE+EYL R EKD +
Sbjct: 723 KVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD-----GEKDTY 772
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 20/108 (18%)
Query: 233 VVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED------ 286
V + KA R +N +T++ Q S+ SP ++ + +SL+++ ++ PE+
Sbjct: 392 VAALDKACGRFINNNAVTKMA-QSSSK---SPELLARYCDSLLKKS--SKNPEEAELEDT 445
Query: 287 --------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++++KDVF+++Y + LAKRL+ S SDD+E +MISKLK
Sbjct: 446 LNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLK 493
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 36/235 (15%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY ++HSGR+LT Q+ +L F R + +Q ST+Q
Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNR---------------------YTLQASTFQ 607
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKTK-----EI 180
M +LL +N + T +++ T I L + LQ L K +L+ + E+
Sbjct: 608 MAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSK----LLVLEDENANVDEVEL 663
Query: 181 EPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIMKAR 240
+P+ + + + +K RV I V K E + E+ T ++EDRK I+AA+VRIMK R
Sbjct: 664 KPDTLIKLYLGYKNKKLRVNI-NVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMR 722
Query: 241 KRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFLQEKDVF 295
K ++H L+ EV QL SRF P +IKK I+ LIE+EYL R EKD +
Sbjct: 723 KVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVD-----GEKDTY 772
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 20/108 (18%)
Query: 233 VVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED------ 286
V + KA R +N +T++ Q S+ SP ++ + +SL+++ ++ PE+
Sbjct: 392 VAALDKACGRFINNNAVTKMA-QSSSK---SPELLARYCDSLLKKS--SKNPEEAELEDT 445
Query: 287 --------RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
+++++KDVF+++Y + LAKRL+ S SDD+E +MISKLK
Sbjct: 446 LNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLK 493
>sp|Q21346|CUL6_CAEEL Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1
Length = 729
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 42/239 (17%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY A H+GR+L ++N+ F +K++ V+ Q
Sbjct: 522 FYNASHNGRRLNWAYSQCRGEVNSKAF---------------------EKKYVFIVTASQ 560
Query: 126 MCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSL--------AMGKASQRILIRYPKT 177
+C L LFN ++ T E+I ++ + + SL + K +++ YP
Sbjct: 561 LCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKD--GYP-- 616
Query: 178 KEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIM 237
P+ V +N + +K RV + T K ++ E ++ V+ DRK+EI+A +VRIM
Sbjct: 617 ----PDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIM 672
Query: 238 KARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPEDRFLQEKDVFE 296
K RK + H LI E+ QLKSRF P+ +IK IE LIE+ Y+ R+ E +V+E
Sbjct: 673 KTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSE-----NEHNVYE 726
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKL 325
+++ EKDVF+ YY+ ++R++ + S SDD+E+ I+ L
Sbjct: 410 KYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNL 448
>sp|Q54XF7|CUL5_DICDI Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1
Length = 750
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 21 FKFYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEVHIFSIYPLRFYLAKHSGRQLTLQP 80
F FY+ + LT + A F P E + + + FY + GR LT
Sbjct: 502 FNFYVLTNGSWTLTNKQ-------TATPFKPPSEMLSSITYFE-SFYKKSYQGRVLTFLY 553
Query: 81 QMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQMCVLLLFNNREKLTY 140
AD+++ R+ +G + + + + YQM +LL+FN +K+T
Sbjct: 554 DFSRADVDS-----RQAKG---------------KIYKLTTTAYQMAILLMFNGADKITR 593
Query: 141 EEIQSETDIPERDL---IRALQSLAMGKASQRILIRYPKTKEIEPNHVFFVNDSFTSKLH 197
I + E + + AL + + S+ P K + F VN F+SK
Sbjct: 594 FLINDTIGLDETSIRLPLLALIKTGIIECSE------PSFKNWNNDTEFTVNSKFSSKKM 647
Query: 198 RVKIQTVAAKGE---SEPERRETRSKVDEDRKHEIEAAVVRIMKARKRMQHNTLITEVTE 254
+V GE SE ++ + +++++R +++AA+VRIMK++K M HN L E T
Sbjct: 648 KVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTT 707
Query: 255 QLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
Q+ F P IKK IE LI++EY+ RT +D
Sbjct: 708 QVSKWFTPKITAIKKAIEYLIDQEYIRRTTDD 739
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
++L +KD+F Y++ L+KRL+ D S S+D+E MI+KLK
Sbjct: 420 KYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLK 459
>sp|Q5RB36|CUL5_PONAB Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3
Length = 780
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 33/233 (14%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY HSGR+L M + + E G+ + ++V+T+Q
Sbjct: 561 FYKKNHSGRKLHWHHLMSNG-----IITFKNEVGQ----------------YDLEVTTFQ 599
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILIRYPKT---KE 179
+ VL +N R EK+++E ++ T++P+ +L R L SL A K +++L+ P+ K+
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 659
Query: 180 IEPNHVFFVNDSFT----SKLH-RVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAV 233
+F VN F+ +K+ R KI + + +E R E + + R + A+
Sbjct: 660 FTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAI 719
Query: 234 VRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
++IMK RK++ + L TE+ E LK+ FLP +IK++IE LIE +Y+ R D
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESD 772
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
+++Q KDVF RY+K HL +RL+LD S + E+NM+ L+ +P
Sbjct: 442 KYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMP 486
>sp|Q93034|CUL5_HUMAN Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4
Length = 780
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 33/233 (14%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY HSGR+L M + + E G+ + ++V+T+Q
Sbjct: 561 FYKKNHSGRKLHWHHLMSNG-----IITFKNEVGQ----------------YDLEVTTFQ 599
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILIRYPKT---KE 179
+ VL +N R EK+++E ++ T++P+ +L R L SL A K +++L+ P+ K+
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 659
Query: 180 IEPNHVFFVNDSFT----SKLH-RVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAV 233
+F VN F+ +K+ R KI + + +E R E + + R + A+
Sbjct: 660 FTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAI 719
Query: 234 VRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
++IMK RK++ + L TE+ E LK+ FLP +IK++IE LIE +Y+ R D
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESD 772
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
+++Q KDVF RY+K HL +RL+LD S + E+NM+ L+ +P
Sbjct: 442 KYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMP 486
>sp|Q9JJ31|CUL5_RAT Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3
Length = 780
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 33/233 (14%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY HSGR+L M + + E G+ + ++V+T+Q
Sbjct: 561 FYKKNHSGRKLHWHHLMSNG-----IITFKNEVGQ----------------YDLEVTTFQ 599
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILIRYPKT---KE 179
+ VL +N R EK+++E ++ T++P+ +L R L SL A K +++L+ P+ K+
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKD 659
Query: 180 IEPNHVFFVNDSFT----SKLH-RVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAV 233
+F VN F+ +K+ R KI + + +E R E + + R + A+
Sbjct: 660 FTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAI 719
Query: 234 VRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
++IMK RK++ + L TE+ E LK+ FLP +IK++IE LIE +Y+ R D
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEAD 772
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
+++Q KDVF RY+K HL +RL+LD S + E+NM+ L+ +P
Sbjct: 442 KYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMP 486
>sp|Q9D5V5|CUL5_MOUSE Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3
Length = 780
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 33/233 (14%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY HSGR+L M + + E G+ + ++V+T+Q
Sbjct: 561 FYKKNHSGRKLHWHHLMSNG-----IITFKNEVGQ----------------YDLEVTTFQ 599
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILIRYPKT---KE 179
+ VL +N R EK+++E ++ T++P+ +L R L SL A K +++L+ P+ K+
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKD 659
Query: 180 IEPNHVFFVNDSFT----SKLH-RVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAV 233
+F VN F+ +K+ R KI + + +E R E + + R + A+
Sbjct: 660 FTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAI 719
Query: 234 VRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
++IMK RK++ + L TE+ E LK+ FLP +IK+++E LIE Y+ R D
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEAD 772
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
+++Q KDVF RY+K HL +RL+LD S + E+NM+ L+ +P
Sbjct: 442 KYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMP 486
>sp|Q29425|CUL5_RABIT Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3
Length = 780
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 33/233 (14%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY HSGR+L M + + E G+ + ++V+T+Q
Sbjct: 561 FYKKNHSGRKLHWHHLMSNG-----IITFKNEVGQ----------------YDLEVTTFQ 599
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILIRYPKT---KE 179
+ VL +N R EK+++E ++ T++P+ +L R L SL A K +++L+ P+ K+
Sbjct: 600 LAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKD 659
Query: 180 IEPNHVFFVNDSFT----SKLH-RVKIQTVA-AKGESEPERRETRSKVDEDRKHEIEAAV 233
+F VN F+ +K+ R KI + + +E R E + + R
Sbjct: 660 FTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLY 719
Query: 234 VRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
++IMK RK++ + L TE+ E LK+ FLP +IK++IE LIE +Y+ R D
Sbjct: 720 IQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESD 772
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
+++Q KDVF RY+K HL +RL+LD S + E+NM+ L+ +P
Sbjct: 442 KYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMP 486
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 119 IQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKAS---QRILIRYP 175
I S Y + LLF + E+LT EI T IP D+ +SL M ++ +IL
Sbjct: 570 ISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDV----KSLVMSMSTIPRCKIL---- 621
Query: 176 KTKEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESE-PERRETRSKVD---EDRKHEIEA 231
K N F VN F+S +VK+ +A S+ + T S VD + E+ A
Sbjct: 622 KKSSSSGNMKFSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSA 681
Query: 232 AVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLARTPED 286
+VRIMK ++ H L+ T++ +SR +P I+K+ I+ LIE+EY+ R +D
Sbjct: 682 IIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADD 736
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 275 IEREYLARTPEDRFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLK 326
I+++ L T L EKD+FE+ YK+ L++RLL +S+ + EK M+ +K
Sbjct: 409 IKQDLLDSTKLIGLLTEKDIFEKIYKKQLSRRLLQQRSLV-EIEKWMVQMIK 459
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 121 VSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRI------LIRY 174
V+ +QM +LLL+N+ + LT E IQ T + + + A+ K Q++ L++
Sbjct: 626 VTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQVPPGLDALVK- 684
Query: 175 PKT--KEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHE---- 228
P+T K P N +F S + +Q+++ G + ++ ED + E
Sbjct: 685 PETQFKLSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDERIEKELN 744
Query: 229 ------IEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLAR 282
+EA +VRIMKA++ + H TL+ E Q RF ++K+ I+SLI++ YL R
Sbjct: 745 TERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQR 804
Score = 38.5 bits (88), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRN 329
++L +KD FE +Y++ AKRL+ S S + E+N+I +L+ N
Sbjct: 469 KYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQAAN 511
>sp|Q23639|CUL5_CAEEL Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2
Length = 765
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 54/245 (22%)
Query: 66 FYLAKHSGRQLTLQPQMGSADLNAVFFGPRREEGEGKDGASSSTSPPAPRKHIIQVSTYQ 125
FY +H+GR+L S + VF G G + ++ +T+Q
Sbjct: 543 FYKKQHNGRKLCWMHHWSSGTM--VF-------GTANGG-----------RFDLECTTFQ 582
Query: 126 MCVLLLFNNR--EKLTYEEIQSETDIPERDLIRALQSL-AMGKASQRILI-RYPKT---- 177
M VL FN+R +K++ E ++ T++P+ +L R L SL A K +IL+ P T
Sbjct: 583 MAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTA 642
Query: 178 KEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPE-------RRETRSKVDEDRKHE-- 228
++ + F +N F V G+S+ R + + + +++HE
Sbjct: 643 RDFTDSTKFLINHDFN----------VVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESI 692
Query: 229 -------IEAAVVRIMKARKRMQHNTLITEVTEQLKSRFLPSPVIIKKRIESLIEREYLA 281
++ +V+I+K RK L E+ E LK F+P+ IIK++I+ LIE +Y+
Sbjct: 693 VALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYME 752
Query: 282 RTPED 286
R +D
Sbjct: 753 RRADD 757
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 33/45 (73%)
Query: 287 RFLQEKDVFERYYKQHLAKRLLLDKSVSDDSEKNMISKLKVRNLP 331
++++ KDVF R+++ HL++RL+L+ S + E+ M++KL+ +P
Sbjct: 422 KYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRECGMP 466
>sp|Q8VE73|CUL7_MOUSE Cullin-7 OS=Mus musculus GN=Cul7 PE=1 SV=2
Length = 1689
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 118 IIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKT 177
I+ VST QM +LL NN+++++ E +Q+ +++P L RA+ L S R + +
Sbjct: 1453 ILHVSTVQMWLLLHLNNQKEVSVESLQAISELPPDVLHRAIGPL----TSSRGPLDLQEQ 1508
Query: 178 KEIEPNHVFFVNDSFTSKLHRVKIQTVAAKGESEPERRETRSKVDEDRKHEIEAAVVRIM 237
K + + +DS + R + + + + E E R+ E R++ + VVRI+
Sbjct: 1509 KNVPGGVLKIRDDSEEPRPRRGNVWLIPPQTYLQAEAEEGRNM--EKRRNLLNCLVVRIL 1566
Query: 238 KA 239
KA
Sbjct: 1567 KA 1568
>sp|P47050|CUL8_YEAST Regulator of Ty1 transposition protein 101 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RTT101 PE=1
SV=1
Length = 842
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 30/156 (19%)
Query: 118 IIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIRYPKT 177
I +++ +Q CVL LFN + LT + I +T + +DL L+S + +IL R
Sbjct: 670 IFELTLFQTCVLTLFNESDHLTLQVISEQTKLAYKDLALVLKSF----CNYKILTR---- 721
Query: 178 KEIEPNHVFFVNDSFTSKLHRVK-------------IQTVAAKGE--SEPERRETRSKVD 222
+ ++ + +N+SF + +VK +Q+ GE S + S+
Sbjct: 722 ---DIDNTYSINESFKPDMKKVKNGKLRVVLPRTASLQSSNTGGERTSSAHHEGSNSQWT 778
Query: 223 EDRKHEIEAAVVRIMKA-RKRMQHNTLITEVTEQLK 257
++ ++A + R +K+ R + ++ L V +Q+K
Sbjct: 779 QEL---LKACITRSVKSERNGLDYDHLFETVKQQIK 811
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 37.4 bits (85), Expect = 0.17, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 116 KHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMG 164
K I+ VST QM +LL FN E+++ E + ++D+ L++AL L G
Sbjct: 1766 KQILHVSTVQMWLLLKFNQTEEVSVETLLKDSDLSPELLLQALVPLTSG 1814
>sp|A9I4I5|SYP_BORPD Proline--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=proS PE=3 SV=1
Length = 576
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 114 PRKHIIQVSTYQMCVLLLFNNREKLTYEEIQSETDIPERDLIRALQSLAMGKASQRILIR 173
P + + + M + NRE Y+ D+PE +L+ L+++ G + R
Sbjct: 346 PVRVVADRTVANMADFVCGANREDFHYQGANWGRDLPEPELVADLRNVVEGDPAPDGAGR 405
Query: 174 YPKTKEIEPNHVFFVNDSFTSKL 196
+ IE HVFF+ ++ L
Sbjct: 406 LAIQRGIEVGHVFFLGTKYSEAL 428
>sp|Q9TV52|AT12A_RABIT Potassium-transporting ATPase alpha chain 2 OS=Oryctolagus
cuniculus GN=ATP12A PE=2 SV=1
Length = 1094
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 93 GPRREEGEGKDGASSSTSPPAPR----------KHIIQVSTY-QMCVLLLFNNREKLTYE 141
G R+EG G+ A S SPP PR + + + T+ + C LLLF + ++
Sbjct: 13 GEERKEGGGRWRAPHSPSPPGPRGCPVPLKAAAQSLCRKPTWGRYCTLLLFQRKLEIYSV 72
Query: 142 EIQSETDIPERD 153
E+ + TDI +++
Sbjct: 73 ELHAATDIKKKE 84
>sp|Q9M1Q9|AB21B_ARATH ABC transporter B family member 21 OS=Arabidopsis thaliana
GN=ABCB21 PE=1 SV=2
Length = 1296
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 6 NNVNFGLVLRLENDLFK-FYLAKHSGRQLTLQPQMGSADLNAV-----FFGPRREEVHIF 59
NNVNF R E +F+ F L+ SG + L Q GS V F+ P+ EV I
Sbjct: 406 NNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRID 465
Query: 60 SIYPLRFYL 68
I F L
Sbjct: 466 GINLKEFQL 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,705,192
Number of Sequences: 539616
Number of extensions: 4533346
Number of successful extensions: 14650
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 14408
Number of HSP's gapped (non-prelim): 202
length of query: 331
length of database: 191,569,459
effective HSP length: 118
effective length of query: 213
effective length of database: 127,894,771
effective search space: 27241586223
effective search space used: 27241586223
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)