RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11820
(98 letters)
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 149 bits (377), Expect = 4e-45
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
+L NLY+ +K+NKF L +R H +L L L + +IH DLKPENI+L R
Sbjct: 180 LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRS 239
Query: 61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+KVIDFGS+ + + V TY+QSR+YRAPE+ILG
Sbjct: 240 G--IKVIDFGSSCYEHQRVY-TYIQSRFYRAPEVILG 273
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 145 bits (369), Expect = 1e-44
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP--- 57
+L + YDF+K+N F P L +IR + +Q+ ++ L L H DLKPENI+ V
Sbjct: 98 LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT 157
Query: 58 ------------VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+KV+DFGSA++ + +T + +R+YRAPE+IL
Sbjct: 158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILA 208
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 145 bits (368), Expect = 2e-44
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
+L +N ++FLK+N F P PL ++R + +Q+ AL L + L H DLKPENI+ V+ +
Sbjct: 103 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE 162
Query: 61 PY---------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
++V DFGSA+ + T + +R+YR PE+IL
Sbjct: 163 TLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-TIVATRHYRPPEVILE 213
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 145 bits (367), Expect = 3e-44
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 22/118 (18%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
L +LY+ + +N ++ ++ I+ ++L AL L+++ L H DLKPENI+L DP +
Sbjct: 117 PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFE 176
Query: 61 PY---------------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+K+IDFG A+ S + + +R YRAPE+IL
Sbjct: 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-SIINTRQYRAPEVILN 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 145 bits (367), Expect = 5e-44
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDPV 58
ML NLYD L+ F + L R Q+ TAL L +L +IH DLKPENI+L +P
Sbjct: 137 MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 196
Query: 59 RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
R +K++DFGS+ + + + Y+QSR+YR+PE++LG
Sbjct: 197 RSA--IKIVDFGSSCQLGQRIY-QYIQSRFYRSPEVLLG 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 129 bits (327), Expect = 4e-38
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVR 59
+L +NL +K+ + +PL Y++ I Q+L L + ++ G+IH D+KPEN+++
Sbjct: 111 VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170
Query: 60 Q--PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
++K+ D G+A + +Q+R YR+PE++LG
Sbjct: 171 PENLIQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLG 209
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 85.9 bits (213), Expect = 2e-21
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 2 LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
+ + +Y + + LP+ Y++ ++Q+ +L + G+ H D+KP+N+ L+DP
Sbjct: 135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL-LLDP-- 191
Query: 60 QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+K+ DFGSA + + N Y+ SRYYRAPE+I G
Sbjct: 192 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 80.5 bits (199), Expect = 1e-19
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 2 LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
+ + +Y + +P+ I+ ++Q+L +L + +G+ H D+KP+N+ L+DP
Sbjct: 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNL-LLDP-- 176
Query: 60 QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+K+IDFGSA + N Y+ SRYYRAPE+I G
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG 215
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 79.4 bits (196), Expect = 3e-19
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 2 LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
+ L+ LK S +P+ I ++Q+ A+ + LG+ H D+KP+N+ LV+
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL-LVNS-- 176
Query: 60 QPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+ +K+ DFGSA + + + Y+ SR+YRAPE++LG
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG 215
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 76.2 bits (188), Expect = 3e-18
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L +LK+ K + + +L A+ + Q G++H+DLKP N ++VD +K
Sbjct: 114 LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 166
Query: 66 VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
+IDFG A+ + + S+ Y PE I
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 75.5 bits (186), Expect = 5e-18
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L +LK+ K + + +L A+ + Q G++H+DLKP N ++VD +K
Sbjct: 95 LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 147
Query: 66 VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILG 97
+IDFG A+ + + S+ Y PE I
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 75.8 bits (187), Expect = 6e-18
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 2 LEQNLYDFLKQNKFS--PLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDP 57
+ L+ + P I+ L Q++ ++ L L + + H D+KP N+ LV+
Sbjct: 108 VPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNV-LVNE 166
Query: 58 VRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+K+ DFGSA +S + N Y+ SRYYRAPE+I G
Sbjct: 167 --ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 75.2 bits (185), Expect = 1e-17
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L +LK+ K + + +L A+ + Q G++H+DLKP N ++VD +K
Sbjct: 142 LNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLK 194
Query: 66 VIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
+IDFG A+ + + S+ Y PE I
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 72.1 bits (177), Expect = 8e-17
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 6 LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
LY L++ LP +L V+ + L++ G++H ++KP NIM V
Sbjct: 96 LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155
Query: 65 KVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
K+ DFG+A + + + Y P++
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 71.0 bits (174), Expect = 4e-16
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 6 LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
LY L++ LP +L V+ + L++ G++H ++KP NIM V
Sbjct: 96 LYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155
Query: 65 KVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILG 97
K+ DFG+A + + + Y P++
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYER 189
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 69.6 bits (170), Expect = 1e-15
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDP-- 57
+L +L ++ ++ + LPL ++ I+ QVL L L + +IH D+KPENI+L
Sbjct: 126 VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ 185
Query: 58 -------------------------------------------VRQPYRVKVIDFGSASH 74
+ +VK+ D G+A
Sbjct: 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW 245
Query: 75 VSKAVCNTYLQSRYYRAPEIILG 97
V K +Q+R YR+ E+++G
Sbjct: 246 VHKHF-TEDIQTRQYRSLEVLIG 267
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 68.3 bits (167), Expect = 3e-15
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 10 LKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
LK++K LP+ L ++L AL L +GL++ DLKPENIML ++K+ID
Sbjct: 171 LKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML-----TEEQLKLIDL 225
Query: 70 GSASHVSKAVCNTYLQSRYYRAPEIILGE 98
G+ S ++ + ++APEI+
Sbjct: 226 GAVSRINSF--GYLYGTPGFQAPEIVRTG 252
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 68.6 bits (167), Expect = 3e-15
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 6 LYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L +L Q L IR +L + +AL L + +IH DLKPENI+L P Q
Sbjct: 105 LRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL-QPGPQRLIH 163
Query: 65 KVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
K+ID G + +C ++ + Y APE++ +
Sbjct: 164 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 66.9 bits (163), Expect = 8e-15
Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
N + K +P + ++L + ++ +IH D+KP+N +L + +
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214
Query: 64 -------VKVIDFGSASHVSKAVCNTYLQSR----YYRAPEIILGE 98
+ +ID G + + T ++ ++ E++ +
Sbjct: 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK 260
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 65.6 bits (160), Expect = 3e-14
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRV 64
L ++++Q F+ +L Q + L L L ++H DLKP NI++ P +
Sbjct: 104 LQEYVEQKDFA-HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA 162
Query: 65 KVIDFGSASHV-----SKAVCNTYLQSRYYRAPEIILGE 98
+ DFG + S + + + + APE++ +
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 64.1 bits (156), Expect = 8e-14
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRV 64
L LK+ +P + + + V+ L L+ + ++H D+KP NI LV+ + +
Sbjct: 118 LDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI-LVNSRGE---I 171
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
K+ DFG + + ++ N+++ +R Y +PE + G
Sbjct: 172 KLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 64.1 bits (156), Expect = 1e-13
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
+ QV L + + +H DLKPENIM ++ +K+IDFG +H+
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQS 312
Query: 80 CNTYLQSRYYRAPEIILGE 98
+ + APE+ G+
Sbjct: 313 VKVTTGTAEFAAPEVAEGK 331
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 63.5 bits (155), Expect = 1e-13
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
Q+L+DF+ + L + R QVL A+ G++H D+K ENI L+D R
Sbjct: 134 QDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--E 188
Query: 64 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
+K+IDFGS + + V + +R Y PE I
Sbjct: 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 223
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 63.5 bits (155), Expect = 1e-13
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
+ Q+L + L + H DLKPENIML+D +K+IDFG A +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 85 QSRYYRAPEIILGE 98
+ + APEI+ E
Sbjct: 180 GTPEFVAPEIVNYE 193
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 63.2 bits (154), Expect = 2e-13
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 5 NLYD-FLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
L++ + ++KF I+ Q+L+ + L + ++H D+KPENI+L +
Sbjct: 132 ELFEQIINRHKFDE---CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLN 187
Query: 64 VKVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
+K++DFG +S SK L + YY APE++ +
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK 223
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 63.3 bits (154), Expect = 2e-13
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-- 78
K I I+ Q+ +AL L G+ H D+KPEN + + + +K++DFG + K
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN--KSFEIKLVDFGLSKEFYKLNN 225
Query: 79 ----VCNTYLQSRYYRAPEIILGE 98
T + Y+ APE++
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTT 249
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 63.0 bits (154), Expect = 2e-13
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
+ Q+L + L + H DLKPENIML+D +K+IDFG A +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 85 QSRYYRAPEIILGE 98
+ + APEI+ E
Sbjct: 180 GTPEFVAPEIVNYE 193
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 62.2 bits (152), Expect = 3e-13
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
L Q+L + L + H DLKPENIML+D R+K+IDFG A +
Sbjct: 113 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 172
Query: 85 QSRYYRAPEIILGE 98
+ + APEI+ E
Sbjct: 173 GTPEFVAPEIVNYE 186
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 62.3 bits (152), Expect = 3e-13
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
L Q+L + L L + H DLKPENIML+D R+K+IDFG A +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 85 QSRYYRAPEIILGE 98
+ + APEI+ E
Sbjct: 179 GTPEFVAPEIVNYE 192
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 62.4 bits (152), Expect = 3e-13
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 17/104 (16%)
Query: 5 NLYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
L++ +++ +K + L I +L + L + G H DLKP NI+L D
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD----EG 171
Query: 63 RVKVIDFGSASHVSKAVCNTYLQSR-----------YYRAPEII 95
+ ++D GS + V + YRAPE+
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 62.4 bits (152), Expect = 4e-13
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV 79
I+ QVL+ + + + ++H DLKPEN++L + +++IDFG ++H
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEASKK 184
Query: 80 CNTYLQSRYYRAPEIILG 97
+ + YY APE++ G
Sbjct: 185 MKDKIGTAYYIAPEVLHG 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 62.0 bits (151), Expect = 5e-13
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
I+ QVL+ + L + ++H DLKPEN++L + +K++DFG ++
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQKK 194
Query: 80 CNTYLQSRYYRAPEIILG 97
L + YY APE++
Sbjct: 195 MKERLGTAYYIAPEVLRK 212
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 62.1 bits (151), Expect = 5e-13
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 6 LYDFLKQNKFSPLPLKY-----IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDP--- 57
L D ++ S LK +L Q+ + + L L +IH DLKP+NI++
Sbjct: 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRF 154
Query: 58 ------VRQPYRVKVIDFGSASHVS------KAVCNTYLQSRYYRAPEIILGE 98
+ R+ + DFG + + N + +RAPE++
Sbjct: 155 TADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEES 207
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 61.6 bits (150), Expect = 6e-13
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D++ + PL R QV+ A+ G++H D+K ENI L+D R K
Sbjct: 126 LFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENI-LIDLRRG--CAK 180
Query: 66 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
+IDFGS + + + +R Y PE I
Sbjct: 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRH 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 61.6 bits (150), Expect = 7e-13
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++ NL ++ L + + +L+Q+L + L G+IH DLKP NI+ V+
Sbjct: 112 MDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSD 163
Query: 62 YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+K++DFG A + T Y+ +RYYRAPE+ILG
Sbjct: 164 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 61.4 bits (149), Expect = 8e-13
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++ NL ++ L + + +L+Q+L + L G+IH DLKP NI+ V+
Sbjct: 149 MDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV----VKSD 200
Query: 62 YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+K++DFG A + T Y+ +RYYRAPE+ILG
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 61.2 bits (149), Expect = 9e-13
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AV 79
I+ QV + + + + ++H DLKPENI+L + +K+IDFG ++ +
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTK 179
Query: 80 CNTYLQSRYYRAPEIILG 97
+ + YY APE++ G
Sbjct: 180 MKDRIGTAYYIAPEVLRG 197
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 61.3 bits (149), Expect = 9e-13
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
+ + Q L + + ++H D+KPENIM ++ VK+IDFG A+ ++ +
Sbjct: 149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEI 206
Query: 80 CNTYLQSRYYRAPEIILGE 98
+ + APEI+ E
Sbjct: 207 VKVTTATAEFAAPEIVDRE 225
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 60.8 bits (148), Expect = 9e-13
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L ++++ + L + Q+ + + LI+ DLKP NI LVD +VK
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD----TKQVK 162
Query: 66 VIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 98
+ DFG + ++ N ++R Y +PE I +
Sbjct: 163 IGDFG----LVTSLKNDGKRTRSKGTLRYMSPEQISSQ 196
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 60.8 bits (148), Expect = 1e-12
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L + + LP + L L AL L GL+H D+KP NI + P R
Sbjct: 142 SLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANI-FLGPRG---RC 196
Query: 65 KVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 97
K+ DFG + A Y APE++ G
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 61.2 bits (149), Expect = 1e-12
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D + NK L + +Q+L A+ L + G+IH DLKPEN++L + +K
Sbjct: 226 LFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIK 282
Query: 66 VIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
+ DFG + + + ++ T + Y APE+++
Sbjct: 283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV 316
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 60.9 bits (148), Expect = 1e-12
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
+ Q+ + + Q+ ++H DLKPENI+ V+ R ++K+IDFG A
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN--RDAKQIKIIDFGLARRYKPREK 244
Query: 80 CNTYLQSRYYRAPEIILGE 98
+ + APE++ +
Sbjct: 245 LKVNFGTPEFLAPEVVNYD 263
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 60.8 bits (148), Expect = 1e-12
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTY 83
+ Q+L AL +IH D+KP ++L VK+ FG A + + V
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGESGLVAGGR 193
Query: 84 LQSRYYRAPEIILGE 98
+ + ++ APE++ E
Sbjct: 194 VGTPHFMAPEVVKRE 208
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 60.4 bits (147), Expect = 1e-12
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
I+ + TA+ L + H D+KPEN++ + +K+ DFG A ++ T
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 86 SRYYRAPEIILGE 98
+ YY APE++ E
Sbjct: 192 TPYYVAPEVLGPE 204
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 60.4 bits (147), Expect = 2e-12
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
+L + + L G++H DLKP NI+ VD P +++ DFG A + N
Sbjct: 119 SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGL 176
Query: 84 LQ----SRYYRAPEIILGE 98
L + + APE++ +
Sbjct: 177 LMTPCYTANFVAPEVLERQ 195
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 59.9 bits (146), Expect = 2e-12
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 85
++ QVL+A+ L + G++H DLKPEN++ + P ++ + DFG + + +T
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-KIMITDFGLSKMEQNGIMSTACG 169
Query: 86 SRYYRAPEIILGE 98
+ Y APE++ +
Sbjct: 170 TPGYVAPEVLAQK 182
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 60.0 bits (146), Expect = 2e-12
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
++ + + ++ Q+L + L Q ++H DLKP+NI+L +K
Sbjct: 116 IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG-DIK 174
Query: 66 VIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 98
++DFG + + A + + Y APEI+ +
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 59.9 bits (146), Expect = 2e-12
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
+HQV AL L + H D++PENI+ R+ +K+I+FG A +
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 85 QSRYYRAPEIILGE 98
+ Y APE+ +
Sbjct: 165 TAPEYYAPEVHQHD 178
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 60.0 bits (146), Expect = 2e-12
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+E +L + L+Q + ++Q+L L + ++H DLKP N+ ++ +
Sbjct: 104 METDLANVLEQGPLLEEHARLF---MYQLLRGLKYIHSANVLHRDLKPANL-FIN--TED 157
Query: 62 YRVKVIDFGSASHVSKAVCNT-----YLQSRYYRAPEIILG 97
+K+ DFG A + + L +++YR+P ++L
Sbjct: 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 59.6 bits (145), Expect = 3e-12
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
I+ QV + + + + ++H DLKPENI+L + +K+IDFG ++ +
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTK 179
Query: 80 CNTYLQSRYYRAPEIILG 97
+ + YY APE++ G
Sbjct: 180 MKDRIGTAYYIAPEVLRG 197
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 59.5 bits (145), Expect = 3e-12
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
I+ VL+A+ +L + H DLKPEN + + +K+IDFG A+ +
Sbjct: 106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPGKM 164
Query: 80 CNTYLQSRYYRAPEIILG 97
T + + YY +P+++ G
Sbjct: 165 MRTKVGTPYYVSPQVLEG 182
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 59.7 bits (145), Expect = 3e-12
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+ +L + +K K + ++++ ++Q+L L + +IH DLKP N+ V +
Sbjct: 116 MGADLNNIVKCQKLTDDHVQFL---IYQILRGLKYIHSADIIHRDLKPSNLA----VNED 168
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+K++DFG A H + + Y+ +R+YRAPEI+L
Sbjct: 169 CELKILDFGLARHTADEMTG-YVATRWYRAPEIMLN 203
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 59.6 bits (145), Expect = 4e-12
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHV 75
L IR ++++L AL +G++H D+KP N+M+ R+ +++ID+G A +
Sbjct: 126 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAEFYH 182
Query: 76 SKAVCNTYLQSRYYRAPEIILG 97
N + SRY++ PE+++
Sbjct: 183 PGQEYNVRVASRYFKGPELLVD 204
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 59.7 bits (144), Expect = 4e-12
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Query: 16 SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
+ + + Q++ L+ GL+H P+N+ + R+ + D + V
Sbjct: 189 GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI----MPDGRLMLGDVSALWKV 244
Query: 76 SKAVCNTYLQSRYYRAPEIILGE 98
Y E +
Sbjct: 245 G-TRGPASSVPVTYAPREFLNAS 266
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 59.3 bits (144), Expect = 4e-12
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L+ + K I Q+ AL + ++H D+K +NI L + V
Sbjct: 109 DLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTV 164
Query: 65 KVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
++ DFG A ++ + + + YY +PEI +
Sbjct: 165 QLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 59.4 bits (144), Expect = 4e-12
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L +K + LP L Q L L L ++H D+K +N+ L+ R
Sbjct: 137 LGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV-LLSS--DGSRAA 191
Query: 66 VIDFGSASHVSKAVCNTYLQSR-------YYRAPEIILGE 98
+ DFG A + L + + APE+++G+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 59.2 bits (144), Expect = 4e-12
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 21 KYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V 79
Y+ ++ Q++ AL ++H DLKPENI+ D +K+IDFG A
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEH 182
Query: 80 CNTYLQSRYYRAPEIILGE 98
+ Y APE+ +
Sbjct: 183 STNAAGTALYMAPEVFKRD 201
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 58.7 bits (143), Expect = 5e-12
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
+ Q+L ++ G++H +LKPEN++L + VK+ DFG A V+ + +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 83 YLQSRYYRAPEIILGE 98
+ + Y +PE++ +
Sbjct: 167 FAGTPGYLSPEVLKKD 182
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 58.9 bits (143), Expect = 6e-12
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+ +L +K K ++++ ++Q+L L + G+IH DLKP N+ V +
Sbjct: 112 MGTDLGKLMKHEKLGEDRIQFL---VYQMLKGLRYIHAAGIIHRDLKPGNLA----VNED 164
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+K++DFG A + Y+ +R+YRAPE+IL
Sbjct: 165 CELKILDFGLARQADSEMTG-YVVTRWYRAPEVILN 199
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 58.8 bits (143), Expect = 6e-12
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++ +L + + I+ +++Q+L L + G++H DLKP N+ V +
Sbjct: 111 MQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA----VNED 162
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+K++DFG A H + Y+ +R+YRAPE+IL
Sbjct: 163 CELKILDFGLARHADAEMTG-YVVTRWYRAPEVILS 197
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 58.9 bits (143), Expect = 6e-12
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
+ Q+L ++ G++H +LKPEN++L + VK+ DFG A V+ + + +
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHGFA 191
Query: 85 QSRYYRAPEIILGE 98
+ Y +PE++ +
Sbjct: 192 GTPGYLSPEVLKKD 205
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 58.5 bits (142), Expect = 7e-12
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+ +L + + + ++I+ ++ +L L L + G++H DL P NI+ +
Sbjct: 116 MRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL----LADN 170
Query: 62 YRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 97
+ + DF A + T Y+ R+YRAPE+++
Sbjct: 171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 58.5 bits (141), Expect = 8e-12
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L +K L + QV+ L L GL+H L+P +I ++D Q V
Sbjct: 193 LLSHSSTHK--SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI-VLD---QRGGVF 246
Query: 66 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ F V SR + PE+
Sbjct: 247 LTGFEHLVRDGARV--VSSVSRGFEPPELEARR 277
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 58.2 bits (141), Expect = 1e-11
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+ D +K K + L ++I I ++L L L Q +IH D+K +N++L + VK
Sbjct: 114 VTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVK 169
Query: 66 VIDFGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
++DFG ++ + + V NT++ + Y+ APE+I +
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 58.1 bits (141), Expect = 1e-11
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+E +LY LK S + Y L+Q+L L + ++H DLKP N++ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYF---LYQILRGLKYIHSANVLHRDLKPSNLL----LNTT 164
Query: 62 YRVKVIDFGSASHVSKAVCNT-----YLQSRYYRAPEIILG 97
+K+ DFG A +T Y+ +R+YRAPEI+L
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 58.1 bits (141), Expect = 1e-11
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
+ +Q+L A+ L + G+IH DLKPEN++L + +K+ DFG + + + + T
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSLMRT 175
Query: 83 YLQSRYYRAPEIILGE 98
+ Y APE+++
Sbjct: 176 LCGTPTYLAPEVLVSV 191
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 57.7 bits (140), Expect = 1e-11
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 19/111 (17%)
Query: 5 NLYDFLKQNKFSPLPLK--YIRPILHQVLTALLKLKQLGLIHADLKPENIML-------- 54
+L D + +N K ++ +L QV L + + L+H D+KP NI +
Sbjct: 97 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNA 156
Query: 55 -------VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
D K+ D G + +S + A E++
Sbjct: 157 ASEEGDEDDWASNKVMFKIGDLGHVTRISSP--QVEEGDSRFLANEVLQEN 205
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 57.7 bits (140), Expect = 1e-11
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
+ Q+L A+ L + G++H DLKPEN++ P +K+ DFG + V + T
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEHQVLMKTVC 211
Query: 85 QSRYYRAPEIILGE 98
+ Y APEI+ G
Sbjct: 212 GTPGYCAPEILRGC 225
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 58.1 bits (140), Expect = 1e-11
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 7/85 (8%)
Query: 17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
L + QV+ L L GL+H L+P +I+L Q V + F
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVRDG 262
Query: 77 KA---VCNTYLQSRYYRAPEIILGE 98
+ A ++
Sbjct: 263 ASAVSPIGRGFAPPETTAERMLPFG 287
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 57.7 bits (140), Expect = 2e-11
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTY 83
+ Q+L A+L Q+G++H +LKPEN++L + VK+ DFG A V + +
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 84 LQSRYYRAPEIILGE 98
+ Y +PE++ +
Sbjct: 174 AGTPGYLSPEVLRKD 188
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 57.0 bits (138), Expect = 2e-11
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 8 DFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKV 66
+ LK+ P+P + + + ++ AL LK + G+IH D+KP NI L+D Q +K+
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI-LLDERGQ---IKL 166
Query: 67 IDFG-SASHVSKAVCNTYLQSRYYRAPEII 95
DFG S V + Y APE I
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 56.9 bits (138), Expect = 2e-11
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
L ++++ + PL + +Q+L + + ++H D+KP+NI++
Sbjct: 96 PTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS----NKT 149
Query: 64 VKVIDFGSASHVSKAVC---NTYLQSRYYRAPEIILGE 98
+K+ DFG A +S+ N L + Y +PE GE
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 56.9 bits (138), Expect = 2e-11
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 6 LYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPY 62
L F KQ +K +P + I ++ AL L +L +IH D+KP N+ L++ + Q
Sbjct: 92 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV-LINALGQ-- 148
Query: 63 RVKVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
VK+ DFG S V + + Y APE I E
Sbjct: 149 -VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 57.1 bits (138), Expect = 2e-11
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 20/106 (18%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPYR 63
+ K PL + I +Q A+ + ++ +IH DLK EN++L +
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN----QGT 176
Query: 64 VKVIDFGSASHVSKAVCNTYLQSR--------------YYRAPEII 95
+K+ DFGSA+ +S ++ R YR PEII
Sbjct: 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 56.9 bits (138), Expect = 2e-11
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-----KAVC 80
++ V +AL L G+ H DLKPENI+ P Q VK+ DF S + +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 81 NTYLQSR----YYRAPEIILG 97
L + Y APE++
Sbjct: 175 TPELLTPCGSAEYMAPEVVEA 195
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 56.8 bits (138), Expect = 3e-11
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+ + L + + +P ++ I Q L A+ + IH D+KPENI L+
Sbjct: 84 CDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENI-LITKHSV- 140
Query: 62 YRVKVIDFGSA--SHVSKAVCNTYLQSRYYRAPEIILG 97
+K+ DFG A + + +R+YR+PE+++G
Sbjct: 141 --IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 56.5 bits (137), Expect = 4e-11
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
L D + P+ K ++ AL Q G+IH D+KP NIM +
Sbjct: 101 VTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM----ISATNA 154
Query: 64 VKVIDFGSASHVSKAVC-----NTYLQSRYYRAPEIILGE 98
VKV+DFG A ++ + + + Y +PE G+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 56.5 bits (137), Expect = 4e-11
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
+L L++ PL I+ Q+ +AL G H D+KPENI++
Sbjct: 119 VDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA----DDF 172
Query: 64 VKVIDFGSASHVSKAVC---NTYLQSRYYRAPEIILGE 98
++DFG AS + + + YY APE
Sbjct: 173 AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES 210
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 56.2 bits (136), Expect = 4e-11
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQ-P 61
+LY L +K P+ ++ + + + + ++H DL+ NI L P
Sbjct: 107 DLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 62 YRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILGE 98
KV DFG + H + + + APE I E
Sbjct: 166 VCAKVADFGLSQQSVHSVSGLLGNF----QWMAPETIGAE 201
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 56.5 bits (137), Expect = 4e-11
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++ + D L+ + L + ++ L Q++ + +IH D+KPENI LV
Sbjct: 106 VDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI-LVSQSGV- 162
Query: 62 YRVKVIDFGSASHVSKAVCNTY---LQSRYYRAPEIILGE 98
VK+ DFG A ++ Y + +R+YRAPE+++G+
Sbjct: 163 --VKLCDFGFARTLAAPG-EVYDDEVATRWYRAPELLVGD 199
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 56.1 bits (136), Expect = 6e-11
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
R I+ +L + L +L ++H DLKPENI+L D +K+ DFG + +
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD----DMNIKLTDFGFSCQLDPGEKLRE 182
Query: 83 YLQSRYYRAPEIILGE 98
+ Y APEII
Sbjct: 183 VCGTPSYLAPEIIECS 198
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 55.9 bits (135), Expect = 7e-11
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYL 84
I+ + A+ L + + H D+KPEN++ R +K+ DFG A + T
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 85 QSRYYRAPEIILGE 98
+ YY APE++ E
Sbjct: 225 YTPYYVAPEVLGPE 238
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 55.5 bits (134), Expect = 8e-11
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+ F+ ++ L I Q+++A+ L+ +IH D+K ENI ++ + + +K
Sbjct: 117 LFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENI-VIA---EDFTIK 170
Query: 66 VIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 98
+IDFGSA+++ + + T+ + Y APE+++G
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN 204
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 55.4 bits (134), Expect = 8e-11
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTY 83
I+ ++++A+ + +G++H DLKPEN++ D +K+IDFG A T
Sbjct: 111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL-EIKIIDFGFARLKPPDNQPLKTP 169
Query: 84 LQSRYYRAPEIILGE 98
+ +Y APE++
Sbjct: 170 CFTLHYAAPELLNQN 184
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 55.0 bits (133), Expect = 1e-10
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 6 LYDFLKQNKFSPLPLK--YIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
L L+ +K+ PL I Q+L L L ++H D+K +N+ L++
Sbjct: 106 LSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNV-LINTYSG--V 161
Query: 64 VKVIDFGSASHVSK--AVCNTYLQSRYYRAPEIILGE 98
+K+ DFG++ ++ T+ + Y APEII
Sbjct: 162 LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 54.6 bits (132), Expect = 2e-10
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 21/108 (19%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
LYD + + Q+L AL + G+IH DLKP NI + + VK
Sbjct: 102 LYDLIHSENL-NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE----SRNVK 156
Query: 66 VIDFGSASHVSKAVCNTYLQSR----------------YYRAPEIILG 97
+ DFG A +V +++ L S+ Y A E++ G
Sbjct: 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 54.5 bits (132), Expect = 2e-10
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
L Q+L F+ + + +PL I+ L Q+L L ++H DLKP+N+ L++
Sbjct: 84 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNL-LINTEGA- 141
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A V TY + +YRAPEI+LG
Sbjct: 142 --IKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGA 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 54.7 bits (132), Expect = 2e-10
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPY 62
L +LK +F + +K +R Q+L L L + +IH DLK +NI +
Sbjct: 115 TLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI-FITGPTG-- 169
Query: 63 RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
VK+ D G A+ + + + + APE+
Sbjct: 170 SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY 202
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 54.6 bits (132), Expect = 2e-10
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++ +L+ + S ++Y ++Q L A+ L +IH DLKP N++ +
Sbjct: 96 MQTDLHRVISTQMLSDDHIQYF---IYQTLRAVKVLHGSNVIHRDLKPSNLL----INSN 148
Query: 62 YRVKVIDFGSASHVSKAVCNT------------YLQSRYYRAPEIILG 97
+KV DFG A + ++ + ++ +R+YRAPE++L
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 54.5 bits (131), Expect = 2e-10
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 19/110 (17%)
Query: 4 QNLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY 62
+NL D++ + I Q+ A+ L GL+H DLKP NI
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM----DD 201
Query: 63 RVKVIDFGSA--------------SHVSKAVCNTYLQSRYYRAPEIILGE 98
VKV DFG + A + ++ Y +PE I G
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN 251
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 54.7 bits (132), Expect = 2e-10
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNT 82
R I+ +L A+ L ++H DLKPENI+L D + ++++ DFG + H+
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM----QIRLSDFGFSCHLEPGEKLRE 258
Query: 83 YLQSRYYRAPEIILGE 98
+ Y APEI+
Sbjct: 259 LCGTPGYLAPEILKCS 274
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 53.9 bits (130), Expect = 3e-10
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 6 LYDFLKQNK--FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
L +K K +P + + Q+ +AL + ++H D+KP N+ +
Sbjct: 119 LSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGV 174
Query: 64 VKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
VK+ D G S ++ + + YY +PE I
Sbjct: 175 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 53.5 bits (129), Expect = 5e-10
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
++D+L + + K R Q+++A+ Q ++H DLK EN++L D +K
Sbjct: 101 VFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL-D---ADMNIK 154
Query: 66 VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ DFG S + + + Y APE+ G+
Sbjct: 155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 53.3 bits (128), Expect = 6e-10
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 2 LEQNLYDFLK-------QNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML 54
E +L+ +K K LP ++ +L+Q+L + L ++H DLKP NI++
Sbjct: 102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
Query: 55 VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY------YRAPEIILGE 98
+ + RVK+ D G A + + YRAPE++LG
Sbjct: 162 MGEGPERGRVKIADMGFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGA 210
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 53.1 bits (128), Expect = 6e-10
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 6 LYDFLKQ--NKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPY 62
L F KQ +K +P + I ++ AL L +L +IH D+KP N+ L++ + Q
Sbjct: 136 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV-LINALGQ-- 192
Query: 63 RVKVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
VK+ DFG S V + Y APE I E
Sbjct: 193 -VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPE 228
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 53.1 bits (128), Expect = 6e-10
Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 5 NLYDFLKQNK-FSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
NL D++ I Q+ A+ L GL+H DLKP NI
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM----DDV 156
Query: 64 VKVIDFGSASHVSKAVCNTYLQSR--------------YYRAPEIILGE 98
VKV DFG + + + + + Y +PE I G
Sbjct: 157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 52.8 bits (127), Expect = 8e-10
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 6 LYDFL------KQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPV 58
+ F +N +P++ I+ I+ VL + + + + H D+KP NI L+D
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI-LMD-- 186
Query: 59 RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ RVK+ DFG + ++ + + PE E
Sbjct: 187 -KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE 225
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 52.7 bits (127), Expect = 8e-10
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRV 64
Y ++ +P + + I + AL LK L +IH D+KP NI L+D +
Sbjct: 110 FYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI-LLDRSGN---I 165
Query: 65 KVIDFGSASHVSKAVCNTYLQS-----RYYRAPEIILGE 98
K+ DFG +S + ++ ++ R Y APE I
Sbjct: 166 KLCDFG----ISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 52.3 bits (126), Expect = 1e-09
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 6 LYDFLKQNKF--SPLPLKYIRPILHQVLTAL-----LKLKQLGLIHADLKPENIMLVDPV 58
L + + L +++ ++ Q+ AL ++H DLKP N+ L
Sbjct: 94 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---- 149
Query: 59 RQPYRVKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 98
VK+ DFG A ++ + T++ + YY +PE +
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 52.3 bits (126), Expect = 1e-09
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 17/102 (16%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+LY L ++ + +K + I Q + L +IH DLK NI + + V
Sbjct: 105 SLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNI-FLH---EDNTV 159
Query: 65 KVIDFGSA--------SHVSKAVCNTYLQSRYYRAPEIILGE 98
K+ DFG A SH + + + L + APE+I +
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQ 197
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 52.4 bits (126), Expect = 1e-09
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
PL I + H L L L +IH D+K NI+L +P VK+ DFGSAS ++
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG----LVKLGDFGSASIMA 205
Query: 77 KAVCNTYLQSRYYRAPEIILGE 98
A N+++ + Y+ APE+IL
Sbjct: 206 PA--NSFVGTPYWMAPEVILAM 225
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 52.3 bits (126), Expect = 1e-09
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
E +L ++ +N + ++ I+ L+Q++ + +H DLKP+N+ L+
Sbjct: 115 AENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL-LLSVSDAS 171
Query: 62 YR--VKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A + + + +YR PEI+LG
Sbjct: 172 ETPVLKIGDFGLARAFGIPI-RQFTHEIITLWYRPPEILLGS 212
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 51.9 bits (125), Expect = 2e-09
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+LY L + + + + I Q + L +IH D+K NI + + V
Sbjct: 117 SLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNI-FLH---EGLTV 171
Query: 65 KVIDFG--------SASHVSKAVCNTYLQSRYYRAPEIILGE 98
K+ DFG S S + + L + APE+I +
Sbjct: 172 KIGDFGLATVKSRWSGSQQVEQPTGSVL----WMAPEVIRMQ 209
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 51.5 bits (124), Expect = 2e-09
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 11/97 (11%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPY 62
+LY+ L + + + + L + + L ++M+ +
Sbjct: 95 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE----DM 150
Query: 63 RVKVIDFGSA-SHVSKAVCNTYLQSRYYRAPEIILGE 98
++ S S + APE + +
Sbjct: 151 TARISMADVKFSFQSPGRMYAPA----WVAPEALQKK 183
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 51.6 bits (124), Expect = 2e-09
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+ + + L I+ + Q+L AL L +IH DLK N+++ ++
Sbjct: 103 VDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG----DIR 157
Query: 66 VIDFGSASHVSKAVC--NTYLQSRYYRAPEIILGE 98
+ DFG ++ K + ++++ + Y+ APE+++ E
Sbjct: 158 LADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 51.4 bits (124), Expect = 2e-09
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++Q+L +L + LP + I+ ++ Q L L L ++H DLKPENI LV
Sbjct: 101 VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI-LVTSGGT- 158
Query: 62 YRVKVIDFGSASHVSKAVCNTYL-QSRYYRAPEIILGE 98
VK+ DFG A S + T + + +YRAPE++L
Sbjct: 159 --VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQS 194
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 50.7 bits (122), Expect = 5e-09
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+Y L++ + + ++ AL +IH D+KPEN++L + +K
Sbjct: 96 VYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGE---LK 149
Query: 66 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+ DFG + H + + Y PE+I G
Sbjct: 150 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 50.4 bits (121), Expect = 5e-09
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 14/101 (13%)
Query: 5 NLYDFL-KQNKFSPLPLKYIRPILHQV---LTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
+LY+ L + Q + L ++ LIH DLKP N++LV
Sbjct: 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA---G 141
Query: 61 PYRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILGE 98
+K+ DFG+A + + APE+ G
Sbjct: 142 GTVLKICDFGTACDIQTHMTNNKGSAA----WMAPEVFEGS 178
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 50.3 bits (121), Expect = 6e-09
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
LY L+++ + + ++ AL + +IH D+KPEN+++ +K
Sbjct: 101 LYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG----YKGELK 154
Query: 66 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 97
+ DFG + H T + Y PE+I G
Sbjct: 155 IADFGWSVHAPSLRRRTMCGTLDYLPPEMIEG 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 50.0 bits (120), Expect = 7e-09
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 14 KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
+ PL I IL ++L L L IH D+K N++L + VK+ DFG A
Sbjct: 112 EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG----EVKLADFGVAG 167
Query: 74 HVSKAVC--NTYLQSRYYRAPEII 95
++ NT++ + ++ APE+I
Sbjct: 168 QLTDTQIKRNTFVGTPFWMAPEVI 191
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 49.9 bits (120), Expect = 8e-09
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
++Q+L +L + +P + I+ ++ Q+L L L ++H DLKP+NI LV Q
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI-LVTSSGQ- 158
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A S + + +YRAPE++L
Sbjct: 159 --IKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQS 194
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 50.1 bits (120), Expect = 8e-09
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNT 82
R Q+L+ + + + H DLK EN L+D P R+K+ DFG S S V + +
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENT-LLDGSPAP-RLKICDFGYSKSSVLHSQPKS 176
Query: 83 YLQSRYYRAPEIILG 97
+ + Y APE++L
Sbjct: 177 TVGTPAYIAPEVLLR 191
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 50.1 bits (120), Expect = 8e-09
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+ D ++ L I IL L L L + IH D+K NI+L K
Sbjct: 111 VSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG----HAK 165
Query: 66 VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
+ DFG A ++ + NT + + ++ APE+I
Sbjct: 166 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 49.6 bits (119), Expect = 9e-09
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 5 NLYDFL-KQNKFSPLPLKYIRPILHQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQP 61
+LY L K L + + + V + L + ++H +LK N+ LVD +
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL-LVD---KK 175
Query: 62 YRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
Y VKV DFG + SK+ T + APE++ E
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSAAGTPE----WMAPEVLRDE 214
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 49.4 bits (119), Expect = 1e-08
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
L+Q+L L + L + L Q+L + ++H DLKP+N+ L++ +
Sbjct: 82 LDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL-LINREGE- 138
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A V Y + +YRAP++++G
Sbjct: 139 --LKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGS 175
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 48.8 bits (117), Expect = 2e-08
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L + K+ K L R L Q++ L + +IH DLK N+ L + VK
Sbjct: 128 LLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVK 181
Query: 66 VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
+ DFG A+ V K +C T Y+ APE++
Sbjct: 182 IGDFGLATKVEYDGERKKVLCGTPNYI------APEVLSK 215
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 48.6 bits (116), Expect = 2e-08
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 28/99 (28%)
Query: 23 IRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 82
I+ IL+ +L + + G+IH DLKP N + + Q VKV DFG A ++
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCL----LNQDCSVKVCDFGLARTINSEKDTN 186
Query: 83 ------------------------YLQSRYYRAPEIILG 97
++ +R+YRAPE+IL
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 48.7 bits (117), Expect = 2e-08
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+E++L L +NK + L I+ L+Q+L + Q ++H DLKP+N+ L++
Sbjct: 101 MEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL-LINSDGA- 157
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A V +Y + +YRAP++++G
Sbjct: 158 --LKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGS 194
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 48.4 bits (116), Expect = 3e-08
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D++ + K + R Q++ A+ + ++H DLKPEN+ L+D VK
Sbjct: 95 LFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENL-LLD---DNLNVK 148
Query: 66 VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ DFG S T S Y APE+I G+
Sbjct: 149 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 48.3 bits (116), Expect = 3e-08
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+Q+L + L + ++ L Q+L L ++H DLKP+N+ L++ +
Sbjct: 83 CDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL-LINRNGE- 139
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ +FG A V Y + +YR P+++ G
Sbjct: 140 --LKLANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGA 176
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 48.3 bits (116), Expect = 3e-08
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L + K+ K L R L Q++ L + +IH DLK N+ L + VK
Sbjct: 102 LLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVK 155
Query: 66 VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
+ DFG A+ V K +C T Y+ APE++
Sbjct: 156 IGDFGLATKVEYDGERKKVLCGTPNYI------APEVLSK 189
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 48.2 bits (115), Expect = 3e-08
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 23/109 (21%)
Query: 5 NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
+L DFLK N S + LH+ + L + + H D+K +N++
Sbjct: 108 SLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL---- 163
Query: 58 VRQPYRVKVIDFGSA--------SHVSKAVCNTYLQSRYYRAPEIILGE 98
++ + DFG A + + T Y APE++ G
Sbjct: 164 LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR----YMAPEVLEGA 208
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 48.4 bits (116), Expect = 3e-08
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 15/75 (20%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 83
Q++ L L LI+ DLKPEN+++ D +Q Y ++V DFG A V +C T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI-D--QQGY-IQVTDFGFAKRVKGRTWTLCGTPEA 204
Query: 84 LQSRYYRAPEIILGE 98
L APEIIL +
Sbjct: 205 L------APEIILSK 213
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 48.1 bits (115), Expect = 4e-08
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L D + + I + + L AL L +IH D+K +NI+L VK
Sbjct: 104 LTDVVTETCMDE---GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----SVK 156
Query: 66 VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
+ DFG + ++ +T + + Y+ APE++
Sbjct: 157 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 47.9 bits (115), Expect = 4e-08
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+ +LK + P R +HQ++T +L L G++H DL N++L +K
Sbjct: 98 MNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR----NMNIK 152
Query: 66 VIDFGSASHVS------KAVCNT--YLQSRYYRAPEIILG 97
+ DFG A+ + +C T Y+ +PEI
Sbjct: 153 IADFGLATQLKMPHEKHYTLCGTPNYI------SPEIATR 186
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 47.8 bits (114), Expect = 4e-08
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQ 85
+V+ AL + +G IH D+KP+N++L D + + +K+ DFG+ ++K C+T +
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLL-D--KSGH-LKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 86 SRYYRAPEIILGE 98
+ Y +PE++ +
Sbjct: 232 TPDYISPEVLKSQ 244
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 47.6 bits (114), Expect = 5e-08
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
+ D + + + P+ Q++ L L G++H D+KP N+ L+ +K
Sbjct: 97 MLDSVPEKR---FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNL-LLT---TGGTLK 149
Query: 66 VIDFGSASHVSKAVCNTYLQ----SRYYRAPEIILGE 98
+ G A + + + S ++ PEI G
Sbjct: 150 ISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 47.7 bits (114), Expect = 5e-08
Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 21/102 (20%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
LY ++ K L + R I +++ + L G++H DLK +N+ D +V
Sbjct: 115 TLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV-FYD----NGKV 168
Query: 65 KVIDFG-----------SASHVSKAVCNTYLQSRYYRAPEII 95
+ DFG + + APEII
Sbjct: 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLC----HLAPEII 206
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 47.6 bits (114), Expect = 5e-08
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D++ ++ + R + Q+L+A+ + ++H DLKPEN+ L+D K
Sbjct: 98 LFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV-LLD---AHMNAK 151
Query: 66 VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ DFG S T S Y APE+I G
Sbjct: 152 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 47.5 bits (113), Expect = 6e-08
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 35/125 (28%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+ + + L +I+ +L+ +L + + G++H DLKP N LV+ Q
Sbjct: 139 ADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANC-LVN---QD 192
Query: 62 YRVKVIDFGSASHVSKAVCNT-----------------------------YLQSRYYRAP 92
VKV DFG A V ++ +R+YRAP
Sbjct: 193 CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252
Query: 93 EIILG 97
E+IL
Sbjct: 253 ELILL 257
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 47.5 bits (113), Expect = 6e-08
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D++ +N L K R + Q+L+ + + ++H DLKPEN+ L+D K
Sbjct: 103 LFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV-LLD---AHMNAK 156
Query: 66 VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ DFG S T S Y APE+I G
Sbjct: 157 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 190
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 47.3 bits (113), Expect = 7e-08
Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 21/110 (19%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L +K S P + + + L + +IH DL N LV + V
Sbjct: 93 TLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNC-LVR---ENKNV 147
Query: 65 KVIDFG----------------SASHVSKAVCNTYLQSRYYRAPEIILGE 98
V DFG S + T + + Y+ APE+I G
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 47.3 bits (113), Expect = 7e-08
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 26 ILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
I+ + A+ L + + H D+KPEN++ R +K+ DFG A
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET 170
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 47.2 bits (113), Expect = 8e-08
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
L+++L +L + + + ++ L Q+L L + ++H DLKP+N+ L++ +
Sbjct: 82 LDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL-LINERGE- 138
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A S TY + +YR P+I+LG
Sbjct: 139 --LKLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGS 175
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 46.9 bits (112), Expect = 8e-08
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 26/109 (23%)
Query: 5 NLYDFLKQNKFSP-LPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
L L + P + + + I LH + +IH DLK NI+++
Sbjct: 92 PLNRVLSGKRIPPDILVNWAVQIARGMNYLHD-------EAIVPIIHRDLKSSNILILQK 144
Query: 58 VRQPYR----VKVIDFGSA----SHVSKAVCNTYLQSRYYRAPEIILGE 98
V +K+ DFG A + Y + APE+I
Sbjct: 145 VENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA----WMAPEVIRAS 189
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 47.2 bits (113), Expect = 8e-08
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L+D++ Q + + R Q+++A+ + ++H DLKPEN+ L+D + VK
Sbjct: 99 LFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL-LLD---EHLNVK 152
Query: 66 VIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 98
+ DFG S T S Y APE+I G+
Sbjct: 153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 46.8 bits (112), Expect = 1e-07
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 16/78 (20%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
++++AL L G+IH DLKPENI+L + + +++ DFG+A K + Q+R
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL-N--EDMH-IQITDFGTA----KVLSPESKQARA 189
Query: 89 --------YRAPEIILGE 98
Y +PE++ +
Sbjct: 190 NSFVGTAQYVSPELLTEK 207
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 46.4 bits (111), Expect = 1e-07
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
L++ + N L L ++ Q+L L + ++H DLKP+N+ L++ Q
Sbjct: 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNL-LINKRGQ- 146
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A V NT+ + +YRAP++++G
Sbjct: 147 --LKLGDFGLARAFGIPV-NTFSSEVVTLWYRAPDVLMGS 183
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 46.8 bits (111), Expect = 1e-07
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
+++ L + +++ DLKP NI+L D + V++ D G A SK + + +
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL-D--EHGH-VRISDLGLACDFSKKKPHASVGTHG 355
Query: 89 YRAPEIILGE 98
Y APE++
Sbjct: 356 YMAPEVLQKG 365
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 46.6 bits (111), Expect = 1e-07
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
L D + Q + + + I + VL AL L G+IH D+K ++I+L RVK
Sbjct: 129 LTDIVSQVRLNE---EQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVK 181
Query: 66 VIDFGSASHVSKAVC--NTYLQSRYYRAPEII 95
+ DFG + +SK V + + + Y+ APE+I
Sbjct: 182 LSDFGFCAQISKDVPKRKSLVGTPYWMAPEVI 213
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 46.6 bits (111), Expect = 1e-07
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+E +L+ ++ N P+ +Y+ ++Q++ + L GL+H D+KP NI L++
Sbjct: 93 METDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGGLLHRDMKPSNI-LLN---AE 145
Query: 62 YRVKVIDFGSASHVSKAVCNT-----------------------YLQSRYYRAPEIILG 97
VKV DFG + T Y+ +R+YRAPEI+LG
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 46.4 bits (110), Expect = 1e-07
Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 13/99 (13%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
D + + + I IL VL AL + +G +H +K +I++ +V
Sbjct: 113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV----DGKVY 168
Query: 66 VIDFGSASHVSKAVC--NTYLQSR-------YYRAPEII 95
+ S + + +PE++
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 46.3 bits (110), Expect = 2e-07
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 1 MLEQNLYDFLKQN-KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
L +L QN F + + ++L L + + +H D+K N++L +
Sbjct: 133 RLGIDLQKISGQNGTFK---KSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL--GYK 187
Query: 60 QPYRVKVIDFGSASH 74
P +V + D+G +
Sbjct: 188 NPDQVYLADYGLSYR 202
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 45.9 bits (109), Expect = 2e-07
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ 60
L ++L L + L + + + ++L AL L + +H ++ ENI +
Sbjct: 139 SLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV--DPED 196
Query: 61 PYRVKVIDFGSASH 74
+V + +G A
Sbjct: 197 QSQVTLAGYGFAFR 210
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 45.5 bits (108), Expect = 3e-07
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 19/79 (24%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-------SKAVCN 81
+++ A+ + +LG +H D+KP+NI+L D R + +++ DFGS + S
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILL-D--RCGH-IRLADFGSCLKLRADGTVRSLVAVG 225
Query: 82 T--YLQSRYYRAPEIILGE 98
T YL +PEI+
Sbjct: 226 TPDYL------SPEILQAV 238
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 45.6 bits (109), Expect = 3e-07
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 15/75 (20%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 83
+V AL L +I+ DLKPENI+L D + + +K+ DFG A +V +C T Y
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILL-D--KNGH-IKITDFGFAKYVPDVTYTLCGTPDY 169
Query: 84 LQSRYYRAPEIILGE 98
+ APE++ +
Sbjct: 170 I------APEVVSTK 178
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 45.4 bits (108), Expect = 3e-07
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
L I IL +VL L L + G IH D+K NI+L + V++ DFG ++ ++
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG----SVQIADFGVSAFLA 172
Query: 77 KAVCNTYLQSR-------YYRAPEII 95
T + R + APE++
Sbjct: 173 TGGDITRNKVRKTFVGTPCWMAPEVM 198
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 45.1 bits (107), Expect = 4e-07
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-------SHVSKAVCN 81
+++ A+ + QL +H D+KP+NI++ D + +++ DFGS + S
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILM-D--MNGH-IRLADFGSCLKLMEDGTVQSSVAVG 238
Query: 82 T--YLQSRYYRAPEIILGE 98
T Y+ +PEI+
Sbjct: 239 TPDYI------SPEILQAM 251
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 45.1 bits (107), Expect = 4e-07
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 19/107 (17%)
Query: 5 NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
+LYD+LK LK LH + + + + H DLK +NI+
Sbjct: 121 SLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS--TQGKPAIAHRDLKSKNIL---- 174
Query: 58 VRQPYRVKVIDFGSASHVSKAVCNTYLQS------RYYRAPEIILGE 98
V++ + D G A + + Y PE++
Sbjct: 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 45.0 bits (107), Expect = 4e-07
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSK-AVCN 81
R ++ + L +IH D+KP N+ LV + +K+ DFG S A+ +
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNL-LVG---EDGHIKIADFGVSNEFKGSDALLS 195
Query: 82 TYLQSRYYRAPEIILGE 98
+ + + APE +
Sbjct: 196 NTVGTPAFMAPESLSET 212
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 44.7 bits (106), Expect = 5e-07
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 5 NLYDFLKQNKFSP-LPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
+LYD+L+ L+ + I LH + + + H DLK +NI+
Sbjct: 92 SLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG--TQGKPAIAHRDLKSKNIL---- 145
Query: 58 VRQPYRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
V++ + + D G A ++ N + ++ Y APE++
Sbjct: 146 VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 44.9 bits (107), Expect = 5e-07
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
+E +L +K N L +I+ + L L L Q ++H DLKP N+ L+D
Sbjct: 94 METDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL-LLDENGV- 150
Query: 62 YRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 97
+K+ DFG A Y +R+YRAPE++ G
Sbjct: 151 --LKLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFG 186
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 44.6 bits (106), Expect = 6e-07
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 17/75 (22%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----VCNT- 82
+++ AL L+ +IH D+KP+NI+L D + V + DF A+ + + + T
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILL-D--EHGH-VHITDFNIAAMLPRETQITTMAGTK 178
Query: 83 -YLQSRYYRAPEIIL 96
Y+ APE+
Sbjct: 179 PYM------APEMFS 187
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 44.3 bits (105), Expect = 7e-07
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
Query: 5 NLYDFLKQNKFSP-LPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
+L+D+L + + +K LH + + + H DLK +NI+
Sbjct: 87 SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG--TQGKPAIAHRDLKSKNIL---- 140
Query: 58 VRQPYRVKVIDFG------SASHVSKAVCNTYLQSRYYRAPEIILGE 98
V++ + D G SA+ N + ++ Y APE++
Sbjct: 141 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 44.1 bits (105), Expect = 8e-07
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP 61
E +L L N L I+ ++ +L L + + ++H D+K N+ L+
Sbjct: 106 CEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRDGV- 162
Query: 62 YRVKVIDFGSA---SHVSKAVCNTYLQ---SRYYRAPEIILGE 98
+K+ DFG A S + N Y + +YR PE++LGE
Sbjct: 163 --LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 203
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 44.4 bits (105), Expect = 9e-07
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSASHVSK-AVCNTYLQ 85
++ L L + +++ DLKPENI+L +++ D G A HV + +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL------DDHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 86 SRYYRAPEIILGE 98
+ Y APE++ E
Sbjct: 348 TVGYMAPEVVKNE 360
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 44.0 bits (104), Expect = 1e-06
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 19/107 (17%)
Query: 5 NLYDFLKQNKFS-PLPLKYIRPI------LHQVLTALLKLKQLGLIHADLKPENIMLVDP 57
+L+D+L + + +K LH + + + H DLK +NI+
Sbjct: 126 SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG--TQGKPAIAHRDLKSKNIL---- 179
Query: 58 VRQPYRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIILGE 98
V++ + D G A + N + ++ Y APE++
Sbjct: 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 43.2 bits (102), Expect = 2e-06
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNTYLQS 86
Q+++ L L Q +I+ DLKPEN++L D V++ D G A + + Y +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL-D--DDGN-VRISDLGLAVELKAGQTKTKGYAGT 352
Query: 87 RYYRAPEIILGE 98
+ APE++LGE
Sbjct: 353 PGFMAPELLLGE 364
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 43.0 bits (102), Expect = 2e-06
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
+ HQ++ ++ L +G+ H D+KPEN+ L+D + +K+ DFG A+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERL 163
Query: 84 LQ----SRYYRAPEIILG 97
L + Y APE++
Sbjct: 164 LNKMCGTLPYVAPELLKR 181
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 43.0 bits (102), Expect = 2e-06
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++++AL L +++ D+K EN+ML D +K+ DFG S K C T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLML-DKDGH---IKITDFGLCKEGISDGATMKTFCGT 168
Query: 83 --YLQSRYYRAPEIILGE 98
YL APE++
Sbjct: 169 PEYL------APEVLEDN 180
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 43.1 bits (102), Expect = 2e-06
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 24 RPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 83
+ HQ++ ++ L +G+ H D+KPEN+ L+D + +K+ DFG A+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERL 163
Query: 84 LQ----SRYYRAPEIILGE 98
L + Y APE++
Sbjct: 164 LNKMCGTLPYVAPELLKRR 182
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 43.1 bits (102), Expect = 2e-06
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML-VDP 57
+L +L D L KFS +K + Q+L + + + L++ D+KP+N ++
Sbjct: 87 LLGPSLEDLLDLCGRKFS---VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 143
Query: 58 VRQPYRVKVIDFGSA 72
+ + V+DFG
Sbjct: 144 SKNANMIYVVDFGMV 158
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 43.0 bits (102), Expect = 3e-06
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++++AL+ L G+I+ DLK +N++L D K+ DFG + C T
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLL-DHEGH---CKLADFGMCKEGICNGVTTATFCGT 187
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEI+
Sbjct: 188 PDYI------APEILQEM 199
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 42.8 bits (101), Expect = 3e-06
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML-VDP 57
+L +L D FS LK + I Q+++ + + LI+ D+KPEN ++
Sbjct: 86 LLGPSLEDLFDLCDRTFS---LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 142
Query: 58 VRQPYRVKVIDFGSA 72
+ + +IDF A
Sbjct: 143 NKTQQVIHIIDFALA 157
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 42.2 bits (100), Expect = 4e-06
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ AL L + G+I+ DLK +N++L D +K+ D+G + C T
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLL-DSEGH---IKLTDYGMCKEGLRPGDTTSTFCGT 173
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEI+ GE
Sbjct: 174 PNYI------APEILRGE 185
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 42.3 bits (99), Expect = 5e-06
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ L L+ G+I+ DLK +N+ML D +K+ DFG +K C T
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 505
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEII +
Sbjct: 506 PDYI------APEIIAYQ 517
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 42.1 bits (99), Expect = 5e-06
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
+L + N +FS K + + ++L L + + +H D+K N++L
Sbjct: 133 RFGSDLQKIYEANAKRFS---RKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL--NY 187
Query: 59 RQPYRVKVIDFGSASH 74
+ P +V ++D+G A
Sbjct: 188 KNPDQVYLVDYGLAYR 203
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 41.9 bits (99), Expect = 5e-06
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ AL L + G+I+ DLK +N++L D +K+ D+G + C T
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLL-DSEGH---IKLTDYGMCKEGLRPGDTTSTFCGT 216
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEI+ GE
Sbjct: 217 PNYI------APEILRGE 228
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 41.9 bits (99), Expect = 6e-06
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ +AL L L +++ DLKPENI+L D Q + + + DFG + + C T
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILL-D--SQGH-IVLTDFGLCKENIEHNSTTSTFCGT 202
Query: 83 --YLQSRYYRAPEIILGE 98
YL APE++ +
Sbjct: 203 PEYL------APEVLHKQ 214
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 41.8 bits (99), Expect = 6e-06
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ AL L Q G+I+ DLKPENIML + Q + VK+ DFG V+ C T
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIML-N--HQGH-VKLTDFGLCKESIHDGTVTHTFCGT 184
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEI++
Sbjct: 185 IEYM------APEILMRS 196
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 41.5 bits (98), Expect = 7e-06
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-------AVCN 81
+++ AL L +LG+I+ D+K ENI+L D + V + DFG +SK
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILL-D--SNGH-VVLTDFG----LSKEFVADETERAY 218
Query: 82 TYLQSRYYRAPEIILGE 98
+ + Y AP+I+ G
Sbjct: 219 DFCGTIEYMAPDIVRGG 235
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 41.4 bits (98), Expect = 8e-06
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ AL L LG+I+ DLKPENI+L D + + +K+ DFG + + C T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILL-D--EEGH-IKLTDFGLSKESIDHEKKAYSFCGT 189
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APE++
Sbjct: 190 VEYM------APEVVNRR 201
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 41.5 bits (97), Expect = 8e-06
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
+L +L D K S LK + + Q++ + + +H D+KP+N L+
Sbjct: 84 LLGPSLEDLFNFCSRKLS---LKTVLMLADQMINRVEFVHSKSFLHRDIKPDNF-LMGLG 139
Query: 59 RQPYRVKVIDFGSA 72
R+ +V +IDFG A
Sbjct: 140 RRANQVYIIDFGLA 153
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 41.1 bits (97), Expect = 9e-06
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 23/103 (22%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L D+++++K + +Y+ Q+ + L+ L+H DL N+++ P V
Sbjct: 102 CLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT----PQHV 156
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYR-----------APEIIL 96
K+ DFG ++K + + + Y A E IL
Sbjct: 157 KITDFG----LAKLL---GAEEKEYHAEGGKVPIKWMALESIL 192
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 41.1 bits (97), Expect = 1e-05
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
++ L L+ G+I+ DLK +N+ML D +K+ DFG +K C T
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 184
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEII +
Sbjct: 185 PDYI------APEIIAYQ 196
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 41.2 bits (97), Expect = 1e-05
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L DFLK ++ S PL + Q+ + ++Q IH DL+ NI+ V
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL----VSASLVC 323
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
K+ DFG A + N Y + APE I
Sbjct: 324 KIADFGLARVIED---NEYTAREGAKFPIKWTAPEAI 357
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 40.6 bits (95), Expect = 2e-05
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L DFLK L L + + Q+ + + ++++ +H DL+ NI+ V +
Sbjct: 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVC 402
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
KV DFG A + N Y + + APE
Sbjct: 403 KVADFGLARLIED---NEYTARQGAKFPIKWTAPEAA 436
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 40.5 bits (95), Expect = 2e-05
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L DFLK L L + + Q+ + + ++++ +H DL+ NI+ V +
Sbjct: 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVC 319
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
KV DFG A + N Y + + APE
Sbjct: 320 KVADFGLARLIED---NEYTARQGAKFPIKWTAPEAA 353
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 39.9 bits (94), Expect = 2e-05
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 82
+++ L L G+++ DLK +NI+L D + + +K+ DFG + C T
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILL-D--KDGH-IKIADFGMCKENMLGDAKTNTFCGT 181
Query: 83 --YLQSRYYRAPEIILGE 98
Y+ APEI+LG+
Sbjct: 182 PDYI------APEILLGQ 193
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 40.0 bits (94), Expect = 3e-05
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L D+++++K + + +Y+ Q+ + L+ L+H DL N++ V+ P V
Sbjct: 102 CLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL----VKTPQHV 156
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRA 91
K+ DFG ++K + + + Y A
Sbjct: 157 KITDFG----LAKLL---GAEEKEYHA 176
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 39.7 bits (93), Expect = 3e-05
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Query: 17 PLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 76
P P+ IR + + A + G+ + P + V V + + +
Sbjct: 126 PSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVR----VSIDGDVVLAYPATMPDAN 180
Query: 77 KA 78
Sbjct: 181 PQ 182
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 39.3 bits (92), Expect = 4e-05
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 1 MLEQNLYDFLKQN--KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPV 58
+L +L D KFS LK + + Q+++ + + IH D+KP+N L+
Sbjct: 86 LLGPSLEDLFNFCSRKFS---LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNF-LMGLG 141
Query: 59 RQPYRVKVIDFGSA 72
++ V +IDFG A
Sbjct: 142 KKGNLVYIIDFGLA 155
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 39.1 bits (92), Expect = 5e-05
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L DFLK L + + + Q+ + +++ IH DL+ NI+ V
Sbjct: 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL----VSDTLSC 148
Query: 65 KVIDFGSA 72
K+ DFG A
Sbjct: 149 KIADFGLA 156
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 39.0 bits (91), Expect = 6e-05
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
NL D+L++ + + + Q+ +A+ L++ IH +L N + V + + V
Sbjct: 302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL----VGENHLV 357
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYR------APEII 95
KV DFG + ++ +TY + APE +
Sbjct: 358 KVADFGLSRLMTG---DTYTAHAGAKFPIKWTAPESL 391
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 38.9 bits (91), Expect = 8e-05
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D+L+ S L + V A+ L+ +H DL N++ V +
Sbjct: 273 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL----VSEDNVA 328
Query: 65 KVIDFGSASHVSKA 78
KV DFG S
Sbjct: 329 KVSDFGLTKEASST 342
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 38.8 bits (91), Expect = 8e-05
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D ++Q++ L + + Q+ + L++ G++H +L N++ ++ P +V
Sbjct: 100 SLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL----LKSPSQV 154
Query: 65 KVIDFG 70
+V DFG
Sbjct: 155 QVADFG 160
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 38.8 bits (91), Expect = 8e-05
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
NL D+L++ + + + Q+ +A+ L++ IH DL N + V + + V
Sbjct: 95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL----VGENHLV 150
Query: 65 KVIDFGSA 72
KV DFG +
Sbjct: 151 KVADFGLS 158
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 38.6 bits (90), Expect = 9e-05
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 19/79 (24%)
Query: 29 QVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCN 81
++++AL L + +++ DLK EN+ML D +K+ DFG K C
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLML-DKDGH---IKITDFGLCKEGIKDGATMKTFCG 311
Query: 82 T--YLQSRYYRAPEIILGE 98
T YL APE++
Sbjct: 312 TPEYL------APEVLEDN 324
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 38.5 bits (90), Expect = 9e-05
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 14/89 (15%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D+L ++ L Q+ + L IH DL N++ + V
Sbjct: 121 SLRDYLPRHSIGLAQLLLF---AQQICEGMAYLHAQHYIHRDLAARNVL----LDNDRLV 173
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
K+ DFG ++KAV YYR E
Sbjct: 174 KIGDFG----LAKAV---PEGHEYYRVRE 195
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 38.4 bits (90), Expect = 1e-04
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIML----VDPVRQ 60
+L +LK+NK + + + + + Q+ A+ L++ LIH ++ +NI+L
Sbjct: 98 SLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
Query: 61 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAP 92
P +K+ D G +S V L +
Sbjct: 157 PPFIKLSDPG----ISITV----LPKDILQER 180
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 38.3 bits (89), Expect = 1e-04
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 23/85 (27%)
Query: 27 LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-------------- 72
LH L K + H DL N++ V+ + DFG +
Sbjct: 127 LHTELPRGDHYK-PAISHRDLNSRNVL----VKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 73 SHVSKAVCNTYLQSRYYRAPEIILG 97
+ + + T Y APE++ G
Sbjct: 182 DNAAISEVGTIR----YMAPEVLEG 202
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 37.6 bits (88), Expect = 2e-04
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D+L+ S L + V A+ L+ +H DL N++ V +
Sbjct: 101 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL----VSEDNVA 156
Query: 65 KVIDFG 70
KV DFG
Sbjct: 157 KVSDFG 162
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 37.7 bits (88), Expect = 2e-04
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L ++L +NK + + LK Q+ + L +H DL N++ V ++V
Sbjct: 111 SLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVL----VESEHQV 165
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
K+ DFG ++KA+ YY +
Sbjct: 166 KIGDFG----LTKAI---ETDKEYYTVKD 187
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 37.6 bits (88), Expect = 2e-04
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L +L+QN+ + K I ++HQV + L++ +H DL N++ + +
Sbjct: 103 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL----LVTQHYA 156
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRA 91
K+ DFG +SKA+ YY+A
Sbjct: 157 KISDFG----LSKAL---RADENYYKA 176
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 37.6 bits (87), Expect = 2e-04
Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 8 DFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 67
+ + + + ++ +L +L + K G++H DL N+++ + +I
Sbjct: 180 ELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV-----SEEGIWII 234
Query: 68 DFGSA 72
DF +
Sbjct: 235 DFPQS 239
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 37.6 bits (88), Expect = 2e-04
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D L++++ L + QV + L+ IH DL N++ + V
Sbjct: 106 SLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLL----LATRDLV 160
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRA 91
K+ DFG + +A+ +Y
Sbjct: 161 KIGDFG----LMRAL---PQNDDHYVM 180
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 37.6 bits (87), Expect = 2e-04
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L+ FL + +P+ + +LHQV + L++ +H +L N++LV+ +
Sbjct: 421 PLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN----RHYA 475
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRA 91
K+ DFG +SKA+ YY A
Sbjct: 476 KISDFG----LSKAL---GADDSYYTA 495
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 36.8 bits (86), Expect = 3e-04
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 15/58 (25%)
Query: 43 IHADLKPENIMLVDPVRQPYRVKVIDFGSA-------SHVSKAVCNTYLQSRYYRAPE 93
IH D+K NI+L D + V DFG A +HV+ AV T + APE
Sbjct: 156 IHRDVKAANILL-DEEFEA---VVGDFGLAKLMDYKDTHVTTAVRGTI----GHIAPE 205
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 37.2 bits (85), Expect = 3e-04
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 10 LKQNKFSPLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQP--YRVKV 66
L+Q + L + ILHQ+ +L L H DL N++L + Y +
Sbjct: 150 LEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNG 209
Query: 67 IDFGSASHVSKAVCNTYLQSRYYRAPEII 95
S + Y SR R ++
Sbjct: 210 KSSTIPSCGLQVSIIDYTLSRLERDGIVV 238
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 36.8 bits (85), Expect = 5e-04
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L FL+ K L L + +Q+ TAL L+ +H D+ N++ V V
Sbjct: 476 ELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL----VSSNDCV 530
Query: 65 KVIDFG 70
K+ DFG
Sbjct: 531 KLGDFG 536
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 36.5 bits (85), Expect = 5e-04
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L+ FL + +P+ + +LHQV + L++ +H DL N++ + +
Sbjct: 95 PLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL----LVNRHYA 149
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRA 91
K+ DFG +SKA+ YY A
Sbjct: 150 KISDFG----LSKAL---GADDSYYTA 169
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 36.4 bits (85), Expect = 5e-04
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 16/59 (27%)
Query: 43 IHADLKPENIMLVDPVRQPYRVKVIDFGSA--------SHVSKAVCNTYLQSRYYRAPE 93
IH D+K NI+L D + + K+ DFG A + ++ + T Y APE
Sbjct: 155 IHRDIKSANILL-D---EAFTAKISDFGLARASEKFAQTVMTSRIVGTT----AYMAPE 205
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 36.1 bits (84), Expect = 5e-04
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L FL+ K+S L L + +Q+ TAL L+ +H D+ N++ V V
Sbjct: 101 ELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL----VSSNDCV 155
Query: 65 KVIDFG 70
K+ DFG
Sbjct: 156 KLGDFG 161
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 36.0 bits (84), Expect = 6e-04
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L +L++NK S L + Q+ A+ L+ + +H D+ NI+ V P V
Sbjct: 98 ELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLESINCVHRDIAVRNIL----VASPECV 152
Query: 65 KVIDFG 70
K+ DFG
Sbjct: 153 KLGDFG 158
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 36.1 bits (84), Expect = 6e-04
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D+L+++K + + Q+ + L IH DL NI LV+ RV
Sbjct: 99 SLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNI-LVE---NENRV 153
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
K+ DFG ++K + +++ E
Sbjct: 154 KIGDFG----LTKVL---PQDKEFFKVKE 175
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 35.8 bits (82), Expect = 7e-04
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 17 PLPLKYIRPILHQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 75
L + I + V+ + +L ++ L+HADL NIM +D +V ID G A +
Sbjct: 166 ELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID------KVYFIDMGQAVTL 219
Query: 76 S 76
Sbjct: 220 R 220
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer,
antibiotic resistance, transfer; HET: GDP; 1.70A
{Enterococcus gallinarum} PDB: 3tdv_A*
Length = 306
Score = 35.8 bits (82), Expect = 9e-04
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 16 SPLPLKYIRPILHQVLTALLKL-----KQLGLIHADLKPENIMLVDPVRQPYRVK-VIDF 69
PL + +R L + + LIH DL P++ L + + + +IDF
Sbjct: 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHF-LTNLNSRQTPLTGIIDF 219
Query: 70 GSAS 73
G A+
Sbjct: 220 GDAA 223
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 35.0 bits (81), Expect = 0.001
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L D+L+++K + + Q+ + L IH DL NI+ V RV
Sbjct: 130 SLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL----VENENRV 184
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
K+ DFG ++K + YY+ E
Sbjct: 185 KIGDFG----LTKVL---PQDKEYYKVKE 206
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 34.6 bits (80), Expect = 0.002
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L DFL++++ + L + Q+ + L +H DL NI++ V
Sbjct: 112 CLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE----AHV 166
Query: 65 KVIDFGSASHVSKAVCNTYLQSRYYRAPE 93
K+ DFG ++K + L YY E
Sbjct: 167 KIADFG----LAKLL---PLDKDYYVVRE 188
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 34.6 bits (80), Expect = 0.002
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
L FL++ L+ + +L + + L + +H DL NI+ V
Sbjct: 132 ALDKFLREKDGEFSVLQLVG-MLRGIAAGMKYLANMNYVHRDLAARNIL----VNSNLVC 186
Query: 65 KVIDFG 70
KV DFG
Sbjct: 187 KVSDFG 192
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 34.6 bits (80), Expect = 0.002
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L FL+ + ++ + +L V + L LG +H DL N++ V
Sbjct: 136 SLDTFLRTHDGQFTIMQLVG-MLRGVGAGMRYLSDLGYVHRDLAARNVL----VDSNLVC 190
Query: 65 KVIDFG 70
KV DFG
Sbjct: 191 KVSDFG 196
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 34.0 bits (78), Expect = 0.004
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 5 NLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV 64
+L +F++ +P I QV + L +H DL N M + + + V
Sbjct: 177 DLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCM----LDEKFTV 231
Query: 65 KVIDFG 70
KV DFG
Sbjct: 232 KVADFG 237
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 33.6 bits (77), Expect = 0.005
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 42 LIHADLKPENIMLVDPVRQPYRVK-VIDFGSA 72
LIH D ++ +L D + + +IDFG A
Sbjct: 193 LIHNDFSSDH-ILFDT--EKNTICGIIDFGDA 221
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 32.9 bits (76), Expect = 0.008
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 16/59 (27%)
Query: 43 IHADLKPENIMLVDPVRQPYRVKVIDFG--------SASHVSKAVCNTYLQSRYYRAPE 93
IH D+K NI L+D + + K+ DFG +H+S V T Y PE
Sbjct: 161 IHRDVKSINI-LLD---ENFVPKITDFGISKKGTELDQTHLSTVVKGTL----GYIDPE 211
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.9 bits (74), Expect = 0.011
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 21/97 (21%)
Query: 1 MLEQ-NLYDFLKQNKFSPLPL-KYIRPIL--HQVLTALLKLKQLGLIHADLKPENIMLVD 56
+++ N+ + P L +Y + H LK + + L D
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--------LKNIEHPERMTLFRMVFL-D 499
Query: 57 PVRQPYR---VKVIDFGSASHVSKAVCNTYLQSRYYR 90
+R K+ +A + S ++ NT Q ++Y+
Sbjct: 500 -----FRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531
Score = 32.5 bits (73), Expect = 0.015
Identities = 19/94 (20%), Positives = 27/94 (28%), Gaps = 26/94 (27%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILH-----QVLTALLKLKQLGLIHADLKPENIMLV 55
ML Q L + N ++ L L LLK K EN +LV
Sbjct: 201 ML-QKLLYQIDPN-WTSRSDHSSNIKLRIHSIQAELRRLLKSKPY---------ENCLLV 249
Query: 56 -DPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
V+ + C L +R+
Sbjct: 250 LLNVQNAKAWNAFNLS---------CKILLTTRF 274
Score = 29.4 bits (65), Expect = 0.15
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 63
+ + DFL + + L + L L LK L DL P ++ +P R
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPR----R 329
Query: 64 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 95
+ +I + A + + + II
Sbjct: 330 LSII--AESIRDGLATWDNWKHVNCDKLTTII 359
Score = 24.4 bits (52), Expect = 8.7
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 8/66 (12%)
Query: 6 LYDFLKQNKF----SPLPLKYIRPI---LHQVLTALLKLKQLGLIHADLKPEN-IMLVDP 57
L + P + + I L ++ L+ K L+ L E+ + +
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEA 583
Query: 58 VRQPYR 63
+Q R
Sbjct: 584 HKQVQR 589
>4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine,
PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A
{Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A*
4ej7_A* 3r78_A*
Length = 272
Score = 31.9 bits (72), Expect = 0.016
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Query: 18 LPLKYIRPILHQVLTALLKLK----QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
+ + QV + KL + H D +N+ + D + + ID G
Sbjct: 167 FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNL-IFDEGK---LIGCIDVGRV 221
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 30.7 bits (70), Expect = 0.054
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 5 NLYDFLKQN-----KFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
+L FL++ + S L + + + + L++ IH D+ N L+
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC-LLTCPG 177
Query: 60 QPYRVKVIDFG 70
K+ DFG
Sbjct: 178 PGRVAKIGDFG 188
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 30.4 bits (69), Expect = 0.065
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 5 NLYDFLKQNKF-----SPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVR 59
+L FL++ + S L + + + + L++ IH D+ N L+
Sbjct: 160 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC-LLTCPG 218
Query: 60 QPYRVKVIDFG 70
K+ DFG
Sbjct: 219 PGRVAKIGDFG 229
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase
enzyme family, structural genomics, JOIN for structural
genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Length = 333
Score = 30.4 bits (69), Expect = 0.067
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 6 LYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK 65
Y L + K Q+L+A L+ +H D +N++ + RV
Sbjct: 152 RYAILG--DAAEDNRKRFEHRFAQILSAQLEGDM-VFVHRDFHAQNLLWLPEREGLARVG 208
Query: 66 VIDF 69
VIDF
Sbjct: 209 VIDF 212
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 30.4 bits (68), Expect = 0.073
Identities = 10/35 (28%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 39 QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
L + H D NIM V ID G
Sbjct: 183 DLVVTHGDACLPNIM----VENGRFSGFIDCGRLG 213
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 30.4 bits (69), Expect = 0.076
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Query: 36 KLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 74
KL + +IH DL N + + +IDFG
Sbjct: 446 KLHKNDVIHNDLTTSNFIFDK------DLYIIDFGLGKI 478
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 30.0 bits (67), Expect = 0.10
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 39 QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 73
+ L H+D+ N+ LV Y +ID+
Sbjct: 205 KYVLCHSDIHAGNV-LVGNEESIY---IIDWDEPM 235
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 29.7 bits (66), Expect = 0.12
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 11 KQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
K+ + L++I I +L+ + K L+H D N M+ R VIDF
Sbjct: 177 KEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANN-MIFRNNR---LFGVIDF 232
Query: 70 GSA 72
G
Sbjct: 233 GDF 235
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 29.2 bits (65), Expect = 0.15
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Query: 27 LHQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
L+ L ++L H DL NI V+ ID G +
Sbjct: 170 LYDFLKTEKPEEELVFSHGDLGDSNIF----VKDGKVSGFIDLGRS 211
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 29.2 bits (65), Expect = 0.17
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 17/84 (20%)
Query: 4 QNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-------------GLIHADLKPE 50
+ + + K++ FS L L+ I + L +L Q L H D
Sbjct: 173 KLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTG 232
Query: 51 NIMLVDPVRQPYRVKVIDFGSASH 74
N L+ Q + VID + S
Sbjct: 233 NT-LLGENEQIW---VIDLDTVSF 252
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural
genomics, PSI, protein structure initiative; 2.80A
{Escherichia coli} SCOP: d.144.1.6
Length = 328
Score = 28.9 bits (64), Expect = 0.21
Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 11/71 (15%)
Query: 7 YDFLKQNKFSPLPLKY-IRPILHQVLTALLKL----KQLGLIHADLKPENIMLVDPVRQP 61
+ P LK +++ A+ + +H D NI+ D
Sbjct: 157 RKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRD----- 211
Query: 62 YRVKVIDFGSA 72
+D A
Sbjct: 212 -GPMFVDLDDA 221
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 29.2 bits (64), Expect = 0.21
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Query: 31 LTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 69
L ++ + LIH DL ++M+ +VID
Sbjct: 223 LKSMFCERAQALIHGDLHTGSVMV-----TQDSTQVIDP 256
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 28.4 bits (63), Expect = 0.30
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 29 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 88
QV + L IH DL NI+ + + VK+ DFG A + K Y++
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNIL----LSEKNVVKICDFGLARDIYKD--PDYVRKGD 254
Query: 89 YRAP 92
R P
Sbjct: 255 ARLP 258
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase,
structural genomics CONS SGC, hemicholinium-3,
phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens}
PDB: 3lq3_A* 2ig7_A*
Length = 379
Score = 28.3 bits (62), Expect = 0.39
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 40 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 74
+ H D++ NI+L+ + ++DF +S+
Sbjct: 220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.1 bits (62), Expect = 0.51
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 36/92 (39%)
Query: 12 QNKFSPLPL------KYIRPILHQVLTALLKLKQLGLIHADLK-P--------------E 50
N+F LP+ + P + L+K + D++ P
Sbjct: 417 SNRF--LPVASPFHSHLLVPASDLINKDLVK-NNVSFNAKDIQIPVYDTFDGSDLRVLSG 473
Query: 51 NI--MLVD-----PVRQPYRVK-----VIDFG 70
+I +VD PV+ + ++DFG
Sbjct: 474 SISERIVDCIIRLPVKWETTTQFKATHILDFG 505
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex,
transferase; HET: CPS ADP; 2.00A {Bacillus subtilis}
SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A*
2pup_A*
Length = 397
Score = 26.5 bits (57), Expect = 1.6
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Query: 42 LIHADLKPENIMLVDPVRQPYRVKVIDFGSA 72
LIH DL +I + KVID A
Sbjct: 229 LIHGDLHTGSIFA-----SEHETKVIDPEFA 254
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD
cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP:
a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Length = 659
Score = 26.0 bits (57), Expect = 2.0
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 13/55 (23%)
Query: 2 LEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQLGLIHADLKPENIMLVD 56
L ++L DFL N +P L +L ++P + LVD
Sbjct: 564 LHKHLGDFLSTNCITPKQASLAN----DQLRSLY---------TQVRPNAVALVD 605
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate
dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED
ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB:
1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A*
Length = 419
Score = 25.5 bits (55), Expect = 3.0
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 17 PLPLKYIRPILHQVLTALLK-----LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG 70
P+ + Y+ L +L L K +L + P LV ++ +K+ D G
Sbjct: 244 PIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLG 302
>1ttw_A Secretion chaperone; chaperone, type III secretion; 2.38A
{Yersinia pestis} SCOP: d.198.1.1
Length = 138
Score = 25.1 bits (54), Expect = 3.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 3 EQNLYDFLKQNKFSPL 18
+ LYD L++N FSPL
Sbjct: 60 QSQLYDILRKNLFSPL 75
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis,
oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Length = 280
Score = 24.8 bits (55), Expect = 4.9
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 4/26 (15%)
Query: 32 TALLKLKQLGLIHADLKPENIMLVDP 57
++ GLI P I + +
Sbjct: 16 RNIVV----GLIANGYDPNRICVTNR 37
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics,
joint center for structural genomics, JCSG; HET: MSE
UNL; 2.32A {Haemophilus somnus 129PT}
Length = 312
Score = 24.7 bits (53), Expect = 5.3
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLKQL-GLIHADLKPENIMLVD 56
E + L+ K L I I+ V L K ++H +L EN + VD
Sbjct: 169 ENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVD 223
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE; 2.55A
{Mesorhizobium loti}
Length = 301
Score = 24.7 bits (53), Expect = 6.8
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 1 MLEQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLKLK-QLGLIHADLKPENIMLVDPVR 59
M++ L +N P + V +AL L H D EN +
Sbjct: 133 MIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFL-----D 187
Query: 60 QPYRVKVIDFGSAS 73
R+ ++D+ +
Sbjct: 188 TGERMWIVDWEYSG 201
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL
ATPase/kinase family, pyruvate dehydrogenase complex,
mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens}
PDB: 2q8f_A* 2q8h_A
Length = 407
Score = 24.7 bits (53), Expect = 6.9
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 3 EQNLYDFLKQNKFSPLPLKYIRPILHQVLTALLK--LK--QLGLIHADLKPENIMLVDPV 58
E L + ++ P+ + Y+ L+ ++ L K ++ + + P + V
Sbjct: 220 ELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATMEHHANRGVYPPIQVHVTLG 279
Query: 59 RQPYRVKVIDFG 70
+ VK+ D G
Sbjct: 280 NEDLTVKMSDRG 291
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase;
transferase, mitochondrial protein kinase, potassium;
HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1
d.122.1.4 PDB: 1gjv_A 1gkx_A*
Length = 388
Score = 24.6 bits (53), Expect = 7.6
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Query: 17 PLPLKYIRPILHQVLTALLK-----LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG 70
+I L +L LLK + L P+ ++ + +++ D G
Sbjct: 229 AARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRG 287
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.141 0.411
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,484,535
Number of extensions: 75384
Number of successful extensions: 616
Number of sequences better than 10.0: 1
Number of HSP's gapped: 379
Number of HSP's successfully gapped: 253
Length of query: 98
Length of database: 6,701,793
Length adjustment: 64
Effective length of query: 34
Effective length of database: 4,914,849
Effective search space: 167104866
Effective search space used: 167104866
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.5 bits)