Psyllid ID: psy11822

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MELTDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Secondary Structure (PSIPRED)
ccccHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccEEEcccccccccEEEEEccccccccccEEEEEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHccccccEEccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHEEccccccccEEHHHHHHHHHHHHHHHHHHHcHHccEEcHHHHcccccEEEEEHEcccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEccccccHEEEEccccccEEEEEEEcccccccccccccEEEEcHHHccHHHHccc
Coil and Loop (DISEMBL)
meltddrkLEIVEGTsrfchnwcyprraltkiglpetsiksKEARKYIFNClddigqvnvptdleggelLAEKADRREFIDLLKRMLTMDqverritpgeaLNHAFVTLAHLVDYAHCNNVKASVQMMEVTRrsqytgatappppaqvlvpappgnvTLQVLTALLKLKQLGlihadlkpenimlvdpvrqpyrvkvidfgsashVSKAVCNTYLqsryyrapeiilge
Flexible Loop (DISEMBL)
meltddrkleivegtsrfchnwcyprraltkiglpetsikSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIdfgsashvskaVCNTylqsryyrapeiilge
Low Complexity Region (SEG)
MELTDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGatappppaqvlvpappGNvtlqvltallklkqlglIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered region (IsUnstruct)
*********EIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV*****************VLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL**
Disordered Region (DISOPRED)
*ELTDDRKLEIVEGTSRFCHNWCYPRRALTK*********SKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered Region (DISEMBL)
MELTDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Disordered Region (DISPRO)
*ELTDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELTDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
Q86Z02	1210	Homeodomain-interacting p	yes	N/A	0.502	0.095	0.574	8e-34
A4L9P5	1211	Homeodomain-interacting p	yes	N/A	0.502	0.094	0.566	1e-33
Q9H2X6	1198	Homeodomain-interacting p	no	N/A	0.423	0.080	0.663	2e-33
O88904	1210	Homeodomain-interacting p	yes	N/A	0.502	0.095	0.566	2e-33
Q9QZR5	1196	Homeodomain-interacting p	no	N/A	0.423	0.081	0.653	4e-33
Q9WUM7	1168	Homeodomain-interacting p	N/A	N/A	0.423	0.083	0.653	9e-33
O88850	1191	Homeodomain-interacting p	no	N/A	0.353	0.068	0.802	4e-31
Q9H422	1215	Homeodomain-interacting p	no	N/A	0.353	0.066	0.790	4e-31
Q9ERH7	1192	Homeodomain-interacting p	no	N/A	0.353	0.067	0.802	5e-31
Q8NE63	616	Homeodomain-interacting p	no	N/A	0.318	0.118	0.706	1e-21

>sp|Q86Z02|HIPK1_HUMAN Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1

 Score =  143 bits (361), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 94/127 (74%), Gaps = 12/127 (9%)

Query: 15  TSRFCH---NWCYPRRALTKIGLPE-----TSIKSKEARKYIFNCLDDIGQVNVPTDLEG 66
           T+RF +   N  YP   L ++  PE     T IKSKEARKYIFNCLDD+ QVN+ TDLEG
Sbjct: 422 TTRFFNRDPNLGYP---LWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEG 478

Query: 67  GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ 126
            ++LAEKADRRE+IDLLK+MLT+D  ++RITP + LNH FVT+ HL+D+ H N+VK+  Q
Sbjct: 479 TDMLAEKADRREYIDLLKKMLTID-ADKRITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQ 537

Query: 127 MMEVTRR 133
            ME+ +R
Sbjct: 538 NMEICKR 544

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|A4L9P5|HIPK1_RAT Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1

 Score =  143 bits (360), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%), Gaps = 12/127 (9%)

Query: 15  TSRFCH---NWCYPRRALTKIGLPE-----TSIKSKEARKYIFNCLDDIGQVNVPTDLEG 66
           T+RF +   N  YP   L ++  PE     T IKSKEARKYIFNCLDD+ QVN+ TDLEG
Sbjct: 422 TTRFFNRDPNLGYP---LWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEG 478

Query: 67  GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ 126
            ++LAEKADRRE+IDLLK+MLT+D  ++R+TP + LNH FVT+ HL+D+ H N+VK+  Q
Sbjct: 479 TDMLAEKADRREYIDLLKKMLTID-ADKRVTPLKTLNHQFVTMTHLLDFPHSNHVKSCFQ 537

Query: 127 MMEVTRR 133
            ME+ +R
Sbjct: 538 NMEICKR 544

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9H2X6|HIPK2_HUMAN Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 80/98 (81%), Gaps = 1/98 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++L EKADRREFIDLLK+MLT+D  ++R
Sbjct: 457 ETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTID-ADKR 515

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
           ITP E LNH FVT+ HL+D+ H  +VK+  Q ME+ +R
Sbjct: 516 ITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKR 553

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O88904|HIPK1_MOUSE Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2

 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 12/127 (9%)

Query: 15  TSRFCH---NWCYPRRALTKIGLPE-----TSIKSKEARKYIFNCLDDIGQVNVPTDLEG 66
           T+RF +   N  YP   L ++  PE     T IKSKEARKYIFNCLDD+ QVN+ TDLEG
Sbjct: 422 TTRFFNRDPNLGYP---LWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEG 478

Query: 67  GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ 126
            ++LAEKADRRE+IDLLK+MLT+D  ++RITP + LNH FVT++HL+D+ H ++VK+  Q
Sbjct: 479 TDMLAEKADRREYIDLLKKMLTID-ADKRITPLKTLNHQFVTMSHLLDFPHSSHVKSCFQ 537

Query: 127 MMEVTRR 133
            ME+ +R
Sbjct: 538 NMEICKR 544

Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9QZR5|HIPK2_MOUSE Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2

 Score =  141 bits (355), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 1/98 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++L EKADRREFIDLLK+MLT+D  ++R
Sbjct: 457 ETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTID-ADKR 515

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
           +TP E LNH FVT+ HL+D+ H  +VK+  Q ME+ +R
Sbjct: 516 VTPIETLNHPFVTMTHLLDFPHSAHVKSCFQNMEICKR 553

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9WUM7|HIPK2_MESAU Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2

 Score =  140 bits (352), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 1/98 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDD+ QV++ TDLEG ++L EKADRREFIDLLK+MLT+D  ++R
Sbjct: 457 ETGIKSKEARKYIFNCLDDMAQVSMTTDLEGSDMLVEKADRREFIDLLKKMLTID-ADKR 515

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
           ITP E LNH FVT+ HL+D+ H  +VK+  Q ME+ +R
Sbjct: 516 ITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKR 553

Serine/threonine-protein kinase involved in transcription regulation, p53/TP53-mediated cellular apoptosis and regulation of the cell cycle. Acts as a corepressor of several transcription factors, including SMAD1 and POU4F1/Brn3a and probably NK homeodomain transcription factors. Phosphorylates PDX1, ATF1, PML, p53/TP53, CREB1, CTBP1, CBX4, RUNX1, EP300, CTNNB1, HMGA1 and ZBTB4. Inhibits cell growth and promotes apoptosis through the activation of p53/TP53 both at the transcription level and at the protein level (by phosphorylation and indirect acetylation). The phosphorylation of p53/TP53 may be mediated by a p53/TP53-HIPK2-AXIN1 complex. Involved in the response to hypoxia by acting as a transcriptional co-suppressor of HIF1A. Mediates transcriptional activation of TP73. In response to TGFB, cooperates with DAXX to activate JNK. Negative regulator through phosphorylation and subsequent proteasomal degradation of CTNNB1 and the antiapoptotic factor CTBP1. In the Wnt/beta-catenin signaling pathway acts as an intermediate kinase between MAP3K7/TAK1 and NLK to promote the proteasomal degradation of MYB. Phosphorylates CBX4 upon DNA damage and promotes its E3 SUMO-protein ligase activity. Activates CREB1 and ATF1 transcription factors by phosphorylation in response to genotoxic stress. In response to DNA damage, stabilizes PML by phosphorylation. PML, HIPK2 and FBXO3 may act synergically to activate p53/TP53-dependent transactivation. Promotes angiogenesis, and is involved in erythroid differentiation, especially during fetal liver erythropoiesis. Phosphorylation of RUNX1 and EP300 stimulates EP300 transcription regulation activity. Triggers ZBTB4 protein degradation in response to DNA damage. Modulates HMGA1 DNA-binding affinity. In response to high glucose, triggers phoyphorylation-mediated subnuclear localization shifting of PDX1. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis.

Mesocricetus auratus (taxid: 10036)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O88850|HIPK3_RAT Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 72/86 (83%), Gaps = 5/86 (5%)

Query: 143 PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 202
           P P +V+ P     V  QV TAL KLK LGLIHADLKPENIMLVDPVRQPYRVKVIDFGS
Sbjct: 293 PLPLKVIRP-----VLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 347

Query: 203 ASHVSKAVCNTYLQSRYYRAPEIILG 228
           ASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 348 ASHVSKTVCSTYLQSRYYRAPEIILG 373

Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9H422|HIPK3_HUMAN Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/86 (79%), Positives = 72/86 (83%), Gaps = 5/86 (5%)

Query: 143 PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 202
           P P +V+ P     +  QV TAL KLK LGLIHADLKPENIMLVDPVRQPYRVKVIDFGS
Sbjct: 293 PLPLKVIRP-----ILQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 347

Query: 203 ASHVSKAVCNTYLQSRYYRAPEIILG 228
           ASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 348 ASHVSKTVCSTYLQSRYYRAPEIILG 373

Serine/threonine-protein kinase involved in transcription regulation, apoptosis and steroidogenic gene expression. Phosphorylates JUN and RUNX2. Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors. The phosphorylation of NR5A1 activates SF1 leading to increased steroidogenic gene expression upon cAMP signaling pathway stimulation. In osteoblasts, supports transcription activation: phosphorylates RUNX2 that synergizes with SPEN/MINT to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ERH7|HIPK3_MOUSE Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=3

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 72/86 (83%), Gaps = 5/86 (5%)

Query: 143 PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 202
           P P +V+ P     V  QV TAL KLK LGLIHADLKPENIMLVDPVRQPYRVKVIDFGS
Sbjct: 293 PLPLKVIRP-----VLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS 347

Query: 203 ASHVSKAVCNTYLQSRYYRAPEIILG 228
           ASHVSK VC+TYLQSRYYRAPEIILG
Sbjct: 348 ASHVSKTVCSTYLQSRYYRAPEIILG 373

Serine/threonine-protein kinase involved in transcription regulation, apoptosis and steroidogenic gene expression. Phosphorylates JUN and RUNX2. Seems to negatively regulate apoptosis by promoting FADD phosphorylation. Enhances androgen receptor-mediated transcription. May act as a transcriptional corepressor for NK homeodomain transcription factors. The phosphorylation of NR5A1 activates SF1 leading to increased steroidogenic gene expression upon cAMP signaling pathway stimulation. In osteoblasts, supports transcription activation: phosphorylates RUNX2 that synergizes with SPEN/MINT to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8NE63|HIPK4_HUMAN Homeodomain-interacting protein kinase 4 OS=Homo sapiens GN=HIPK4 PE=2 SV=1

 Score =  103 bits (257), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNT 213
            VTLQVLTAL +LK+L +IHADLKPENIMLVD  R P+RVKVIDFGSAS  S+   V   
Sbjct: 115 TVTLQVLTALARLKELAIIHADLKPENIMLVDQTRCPFRVKVIDFGSASIFSEVRYVKEP 174

Query: 214 YLQSRYYRAPEIILG 228
           Y+QSR+YRAPEI+LG
Sbjct: 175 YIQSRFYRAPEILLG 189

Protein kinase that phosphorylates human TP53 at Ser-9, and thus induces TP53 repression of BIRC5 promoter (By similarity). May act as a corepressor of transcription factors.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
242003285	1364	hipk, putative [Pediculus humanus corpor	0.537	0.090	0.803	2e-51
345497577	1423	PREDICTED: homeodomain-interacting prote	0.427	0.068	0.959	2e-48
328789518	1387	PREDICTED: homeodomain-interacting prote	0.427	0.070	0.949	8e-48
350415455	1381	PREDICTED: homeodomain-interacting prote	0.427	0.070	0.949	8e-48
340710684	1380	PREDICTED: homeodomain-interacting prote	0.427	0.071	0.949	8e-48
357626597	1015	hypothetical protein KGM_04658 [Danaus p	0.427	0.096	0.959	1e-47
383853453	1371	PREDICTED: homeodomain-interacting prote	0.427	0.071	0.939	2e-47
270005401	1192	hypothetical protein TcasGA2_TC007452 [T	0.563	0.108	0.731	2e-47
383853451	1390	PREDICTED: homeodomain-interacting prote	0.427	0.070	0.939	2e-47
91080885	1210	PREDICTED: similar to GA14321-PA [Tribol	0.563	0.106	0.731	2e-47

>gi|242003285|ref|XP_002422680.1| hipk, putative [Pediculus humanus corporis] gi|212505502|gb|EEB09942.1| hipk, putative [Pediculus humanus corporis]

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/132 (80%), Positives = 111/132 (84%), Gaps = 9/132 (6%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 524 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQ-ERR 582

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAP--------PPPAQ 147
           I PGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+ + G+T+          PP  
Sbjct: 583 IMPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRNGFNGSTSSNHHQSATQAPPLV 642

Query: 148 VLVPAPPGNVTL 159
            LVP+  GNVTL
Sbjct: 643 NLVPSSNGNVTL 654

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345497577|ref|XP_001600863.2| PREDICTED: homeodomain-interacting protein kinase 2-like [Nasonia vitripennis]

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/99 (95%), Positives = 97/99 (97%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 488 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 546

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 547 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 585

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789518|ref|XP_392202.4| PREDICTED: homeodomain-interacting protein kinase 2 [Apis mellifera]

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/99 (94%), Positives = 96/99 (96%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 495 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 553

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 554 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 592

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415455|ref|XP_003490647.1| PREDICTED: homeodomain-interacting protein kinase 2-like [Bombus impatiens]

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/99 (94%), Positives = 96/99 (96%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 489 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 547

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 548 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 586

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710684|ref|XP_003393916.1| PREDICTED: homeodomain-interacting protein kinase 2-like [Bombus terrestris]

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/99 (94%), Positives = 96/99 (96%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 489 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 547

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 548 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 586

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357626597|gb|EHJ76637.1| hypothetical protein KGM_04658 [Danaus plexippus]

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/99 (95%), Positives = 96/99 (96%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 363 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 421

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RRS
Sbjct: 422 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRS 460

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853453|ref|XP_003702237.1| PREDICTED: homeodomain-interacting protein kinase 2-like isoform 2 [Megachile rotundata]

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/99 (93%), Positives = 95/99 (95%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTD EGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 476 ETGIKSKEARKYIFNCLDDIGQVNVPTDFEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 534

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 535 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 573

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005401|gb|EFA01849.1| hypothetical protein TcasGA2_TC007452 [Tribolium castaneum]

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 107/138 (77%), Gaps = 9/138 (6%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEK DR+EFIDLLKRMLTMDQ ERR
Sbjct: 426 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKVDRKEFIDLLKRMLTMDQ-ERR 484

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQY--TGATAPPPPAQV----- 148
            TPGEALNH FV LAHLVDYAHCNNVKASVQMMEV RR+ Y  T + +   PAQ      
Sbjct: 485 TTPGEALNHPFVRLAHLVDYAHCNNVKASVQMMEVCRRNDYNSTASGSHHQPAQQATSLV 544

Query: 149 -LVPAPPGNVTLQVLTAL 165
             VP   GNVT  +   L
Sbjct: 545 NFVPGSNGNVTFTINNQL 562

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853451|ref|XP_003702236.1| PREDICTED: homeodomain-interacting protein kinase 2-like isoform 1 [Megachile rotundata]

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/99 (93%), Positives = 95/99 (95%), Gaps = 1/99 (1%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTD EGG+LLAEKADRREFIDLLKRMLTMDQ ERR
Sbjct: 498 ETGIKSKEARKYIFNCLDDIGQVNVPTDFEGGQLLAEKADRREFIDLLKRMLTMDQ-ERR 556

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS 134
           ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV RR+
Sbjct: 557 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVCRRA 595

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080885|ref|XP_972748.1| PREDICTED: similar to GA14321-PA [Tribolium castaneum]

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 107/138 (77%), Gaps = 9/138 (6%)

Query: 36  ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
           ET IKSKEARKYIFNCLDDIGQVNVPTDLEGG+LLAEK DR+EFIDLLKRMLTMDQ ERR
Sbjct: 444 ETGIKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKVDRKEFIDLLKRMLTMDQ-ERR 502

Query: 96  ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQY--TGATAPPPPAQV----- 148
            TPGEALNH FV LAHLVDYAHCNNVKASVQMMEV RR+ Y  T + +   PAQ      
Sbjct: 503 TTPGEALNHPFVRLAHLVDYAHCNNVKASVQMMEVCRRNDYNSTASGSHHQPAQQATSLV 562

Query: 149 -LVPAPPGNVTLQVLTAL 165
             VP   GNVT  +   L
Sbjct: 563 NFVPGSNGNVTFTINNQL 580

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
FB|FBgn0035142	1340	hipk "homeodomain interacting	0.580	0.099	0.661	1.3e-39
UNIPROTKB|I3LN45	523	I3LN45 "Uncharacterized protei	0.423	0.185	0.663	7.5e-31
UNIPROTKB|D4ABW4	718	Hipk1 "Homeodomain-interacting	0.423	0.135	0.653	3.2e-30
UNIPROTKB|H7BXX9	918	HIPK2 "Homeodomain-interacting	0.423	0.105	0.663	5.8e-30
UNIPROTKB|E1BW82	1214	HIPK1 "Uncharacterized protein	0.502	0.094	0.582	5.8e-30
UNIPROTKB|F1SBR4	1162	HIPK1 "Uncharacterized protein	0.423	0.083	0.663	6.9e-30
UNIPROTKB|Q5SQL3	1165	HIPK1 "Homeodomain-interacting	0.423	0.083	0.663	7e-30
UNIPROTKB|J9NSA9	1169	HIPK1 "Uncharacterized protein	0.423	0.082	0.663	7e-30
UNIPROTKB|J3KP92	1176	HIPK1 "Homeodomain-interacting	0.423	0.082	0.663	7.1e-30
UNIPROTKB|F1SBR5	1207	HIPK1 "Uncharacterized protein	0.423	0.080	0.663	7.4e-30

FB|FBgn0035142 hipk "homeodomain interacting protein kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 435 (158.2 bits), Expect = 1.3e-39, P = 1.3e-39
 Identities = 92/139 (66%), Positives = 104/139 (74%)

Query:     3 LTDDRKLEIVEGTSRFCH---NWCYP--RRALTKIGLPETSIKSKEARKYIFNCLDDIGQ 57
             L  +  L     TS+F +   +  YP  R   T+    ET+ KSKEARKYIFNCLDDIGQ
Sbjct:   412 LPTEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSKEARKYIFNCLDDIGQ 471

Query:    58 VNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH 117
             VNVPTDLEGG+LLAEK DRREFIDLLKRMLT+DQ ERR+TP EALNH+F  L HLVDY +
Sbjct:   472 VNVPTDLEGGQLLAEKTDRREFIDLLKRMLTIDQ-ERRLTPAEALNHSFTRLTHLVDYVY 530

Query:   118 CNNVKASVQMMEVTRRSQY 136
             CNNVKASVQMMEV RR  +
Sbjct:   531 CNNVKASVQMMEVCRRGDF 549

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IDA

GO:0006468 "protein phosphorylation" evidence=IDA;NAS

GO:0004672 "protein kinase activity" evidence=IDA;NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0043067 "regulation of programmed cell death" evidence=IDA

GO:0008013 "beta-catenin binding" evidence=IPI

GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IMP

GO:0050821 "protein stabilization" evidence=IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IGI

GO:0048749 "compound eye development" evidence=IMP

GO:0035332 "positive regulation of hippo signaling cascade" evidence=IGI;IMP;IPI

GO:0035265 "organ growth" evidence=IMP

UNIPROTKB|I3LN45 I3LN45 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 342 (125.4 bits), Expect = 7.5e-31, P = 7.5e-31
 Identities = 65/98 (66%), Positives = 80/98 (81%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++L EKADRREFIDLLK+MLT+D  ++R
Sbjct:    74 ETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTID-ADKR 132

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP E LNH FVT+ HL+D+ H  +VK+  Q ME+ +R
Sbjct:   133 ITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKR 170

GO:0060395 "SMAD protein signal transduction" evidence=IEA

GO:0046790 "virion binding" evidence=IEA

GO:0046332 "SMAD binding" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0030514 "negative regulation of BMP signaling pathway" evidence=IEA

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0006978 "DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|D4ABW4 Hipk1 "Homeodomain-interacting protein kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 342 (125.4 bits), Expect = 3.2e-30, P = 3.2e-30
 Identities = 64/98 (65%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   448 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 506

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             +TP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   507 VTPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 544

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|H7BXX9 HIPK2 "Homeodomain-interacting protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 342 (125.4 bits), Expect = 5.8e-30, P = 5.8e-30
 Identities = 65/98 (66%), Positives = 80/98 (81%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++L EKADRREFIDLLK+MLT+D  ++R
Sbjct:   457 ETGIKSKEARKYIFNCLDDMAQVNMTTDLEGSDMLVEKADRREFIDLLKKMLTID-ADKR 515

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP E LNH FVT+ HL+D+ H  +VK+  Q ME+ +R
Sbjct:   516 ITPIETLNHPFVTMTHLLDFPHSTHVKSCFQNMEICKR 553

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1BW82 HIPK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 344 (126.2 bits), Expect = 5.8e-30, P = 5.8e-30
 Identities = 74/127 (58%), Positives = 94/127 (74%)

Query:    15 TSRFCH---NWCYPRRALTKIGLPE-----TSIKSKEARKYIFNCLDDIGQVNVPTDLEG 66
             TSRF +   N  YP   L ++  PE     T IKSKEARKYIFNCLDD+ QVN+ TDLEG
Sbjct:   422 TSRFFNRDPNLGYP---LWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEG 478

Query:    67 GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ 126
              ++LAEKADRRE+IDLLK+MLT+D  ++RITP + LNH FVT+ HL+D+ H N+VK+  Q
Sbjct:   479 TDMLAEKADRREYIDLLKKMLTID-ADKRITPLKTLNHPFVTMTHLLDFPHSNHVKSCFQ 537

Query:   127 MMEVTRR 133
              ME+ +R
Sbjct:   538 NMEICKR 544

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0010803 "regulation of tumor necrosis factor-mediated signaling pathway" evidence=IEA

GO:0010842 "retina layer formation" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IEA

GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA

GO:0060059 "embryonic retina morphogenesis in camera-type eye" evidence=IEA

GO:0060235 "lens induction in camera-type eye" evidence=IEA

GO:0061072 "iris morphogenesis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

UNIPROTKB|F1SBR4 HIPK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 343 (125.8 bits), Expect = 6.9e-30, P = 6.9e-30
 Identities = 65/98 (66%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   445 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 503

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   504 ITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 541

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|Q5SQL3 HIPK1 "Homeodomain-interacting protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 343 (125.8 bits), Expect = 7.0e-30, P = 7.0e-30
 Identities = 65/98 (66%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   448 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 506

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   507 ITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 544

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J9NSA9 HIPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 343 (125.8 bits), Expect = 7.0e-30, P = 7.0e-30
 Identities = 65/98 (66%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   448 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 506

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   507 ITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 544

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|J3KP92 HIPK1 "Homeodomain-interacting protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 343 (125.8 bits), Expect = 7.1e-30, P = 7.1e-30
 Identities = 65/98 (66%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   448 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 506

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   507 ITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 544

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1SBR5 HIPK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 343 (125.8 bits), Expect = 7.4e-30, P = 7.4e-30
 Identities = 65/98 (66%), Positives = 82/98 (83%)

Query:    36 ETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERR 95
             ET IKSKEARKYIFNCLDD+ QVN+ TDLEG ++LAEKADRRE+IDLLK+MLT+D  ++R
Sbjct:   445 ETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTID-ADKR 503

Query:    96 ITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR 133
             ITP + LNH FVT+ HL+D+ H N+VK+  Q ME+ +R
Sbjct:   504 ITPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEICKR 541

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O88904	HIPK1_MOUSE	2, ., 7, ., 1, 1, ., 1	0.5669	0.5021	0.0950	yes	N/A
A4L9P5	HIPK1_RAT	2, ., 7, ., 1, 1, ., 1	0.5669	0.5021	0.0949	yes	N/A
Q86Z02	HIPK1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5748	0.5021	0.0950	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.737
3rd Layer	2.7.11	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	229
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-15
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-14
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	8e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-10
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	9e-10
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-09
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-08
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-08
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	7e-08
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-08
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	7e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-07
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-07
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-07
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	5e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-07
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-06
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	5e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	7e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-05
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	1e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	8e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-05
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	9e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-04
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	3e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-04
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	4e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	6e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.001
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.001
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.001
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.001
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.001
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.001
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.001
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.001
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.001
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.001
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.002
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	0.002
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.002
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.002
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.002
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.002
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.003
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.003
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.003
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.003
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.003
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.004
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.004
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.004
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.004
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 79.1 bits (196), Expect = 8e-18
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTYL 215
              Q+L+AL  L   G++H DLKPENI+L +       VK+ DFG A  +       T++
Sbjct: 102 YLRQILSALEYLHSKGIVHRDLKPENILLDE----DGHVKLADFGLARQLDPGEKLTTFV 157

Query: 216 QSRYYRAPEIILGE 229
            +  Y APE++LG+
Sbjct: 158 GTPEYMAPEVLLGK 171

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 72.3 bits (178), Expect = 3e-15
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 155 GNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--SHVSKAVCN 212
             + LQ+L  L  L   G+IH DLKPENI+L     +   VK+ DFG A     S +   
Sbjct: 101 KKIALQILRGLEYLHSNGIIHRDLKPENILLD----ENGVVKIADFGLAKKLLKSSSSLT 156

Query: 213 TYLQSRYYRAPEIILG 228
           T++ + +Y APE++LG
Sbjct: 157 TFVGTPWYMAPEVLLG 172

Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 70.6 bits (174), Expect = 1e-14
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTY 214
           ++  Q+L  L  + + G  H DLKPEN++    V  P  VK+ DFG A  + S+     Y
Sbjct: 103 SIIYQILQGLAHIHKHGFFHRDLKPENLL----VSGPEVVKIADFGLAREIRSRPPYTDY 158

Query: 215 LQSRYYRAPEIIL 227
           + +R+YRAPEI+L
Sbjct: 159 VSTRWYRAPEILL 171

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTYLQ 216
           LQ+L  L  L   G+IH DLKPENI+L        +VK+ DFG +  +   K++  T + 
Sbjct: 99  LQILEGLEYLHSNGIIHRDLKPENILLDSD---NGKVKLADFGLSKLLTSDKSLLKTIVG 155

Query: 217 SRYYRAPEIILGE 229
           +  Y APE++LG+
Sbjct: 156 TPAYMAPEVLLGK 168

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CNTYL 215
           V  ++L  L  L   G+IH D+K  NI+L         VK+IDFG ++ +S     NT +
Sbjct: 103 VCKELLKGLEYLHSNGIIHRDIKAANILLTS----DGEVKLIDFGLSAQLSDTKARNTMV 158

Query: 216 QSRYYRAPEIILGE 229
            + Y+ APE+I G+
Sbjct: 159 GTPYWMAPEVINGK 172

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+ +R
Sbjct: 126 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTR 181

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 182 YYRAPEVILG 191

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.3 bits (142), Expect = 3e-10
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQS 217
           T Q+L  L  L   G++H D+K  NI LVD       VK+ DFG A  +          S
Sbjct: 107 TRQILEGLAYLHSNGIVHRDIKGANI-LVDS---DGVVKLADFGCAKRLGDIETGEGTGS 162

Query: 218 R----YYRAPEIILGE 229
                Y+ APE+I GE
Sbjct: 163 VRGTPYWMAPEVIRGE 178

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV---SKAVCNTY 214
             Q+L A+       +IH D+KPENI LV        +K+ DFG A  +     +    Y
Sbjct: 106 IWQLLQAIAYCHSHNIIHRDIKPENI-LVSESGV---LKLCDFGFARALRARPASPLTDY 161

Query: 215 LQSRYYRAPEIILG 228
           + +R+YRAPE+++G
Sbjct: 162 VATRWYRAPELLVG 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 58.2 bits (139), Expect = 5e-10
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 11/80 (13%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV------ 210
           +  Q+L+AL  L   G+IH D+KPENI+L    R    VK+IDFG A  +          
Sbjct: 106 ILAQILSALEYLHSKGIIHRDIKPENILLDRDGRV---VKLIDFGLAKLLPDPGSTSSIP 162

Query: 211 --CNTYLQSRYYRAPEIILG 228
              +T + +  Y APE++LG
Sbjct: 163 ALPSTSVGTPGYMAPEVLLG 182

Length = 384

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +    L  L  L     IH D+K  NI+L +P      VK+ DFGSAS VS A  N+++ 
Sbjct: 120 ICHGALQGLAYLHSHERIHRDIKAGNILLTEPG----TVKLADFGSASLVSPA--NSFVG 173

Query: 217 SRYYRAPEIIL 227
           + Y+ APE+IL
Sbjct: 174 TPYWMAPEVIL 184

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G+IH DLKP NI     V +   +K++DFG A H    +   Y+ +R+
Sbjct: 126 QILRGLKYIHSAGIIHRDLKPSNI----AVNEDCELKILDFGLARHTDDEM-TGYVATRW 180

Query: 220 YRAPEIIL 227
           YRAPEI+L
Sbjct: 181 YRAPEIML 188

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A         T Y+ +R
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTACTNFMMTPYVVTR 186

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 187 YYRAPEVILG 196

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTYLQSR 218
           Q+L +L  + + G+ H D+KPENI++ D       +K+ DFGS   + SK     Y+ +R
Sbjct: 108 QLLKSLDHMHRNGIFHRDIKPENILIKD-----DILKLADFGSCRGIYSKPPYTEYISTR 162

Query: 219 YYRAPEIIL 227
           +YRAPE +L
Sbjct: 163 WYRAPECLL 171

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 207
             ++L AL  L   G+IH DLKPENI+L     +   +K+ DFG+A  + 
Sbjct: 108 AAEILLALEYLHSKGIIHRDLKPENILL----DKDMHIKITDFGTAKVLD 153

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NT 213
           +   Q+L  L      G++H DLKPEN+++         +K+ DFG A      V     
Sbjct: 102 SYLYQLLQGLAFCHSHGILHRDLKPENLLI----NTEGVLKLADFGLARSFGSPVRPYTH 157

Query: 214 YLQSRYYRAPEIILG 228
           Y+ +R+YRAPE++LG
Sbjct: 158 YVVTRWYRAPELLLG 172

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 54.1 bits (131), Expect = 8e-09
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTYLQS 217
           +++ AL  L  LG+I+ DLKPENI+L       + +K+ DFG A  +S   +  NT+  +
Sbjct: 101 EIVLALEYLHSLGIIYRDLKPENILLDA---DGH-IKLTDFGLAKELSSEGSRTNTFCGT 156

Query: 218 RYYRAPEIILGE 229
             Y APE++LG+
Sbjct: 157 PEYLAPEVLLGK 168

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 11/76 (14%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-------AVCN 212
           Q+L AL  +    +IH DLKP NI L++      RVK+ DFG A  +S+        V  
Sbjct: 115 QLLKALKYIHSGNVIHRDLKPSNI-LLN---SDCRVKLADFGLARSLSELEENPENPVLT 170

Query: 213 TYLQSRYYRAPEIILG 228
            Y+ +R+YRAPEI+LG
Sbjct: 171 DYVATRWYRAPEILLG 186

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 15/75 (20%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNT--Y 214
           QV+ AL  L  L +++ DLKPEN+ L+D     Y +K+ DFG A  V      +C T  Y
Sbjct: 109 QVVLALEYLHSLDIVYRDLKPENL-LLD--SDGY-IKITDFGFAKRVKGRTYTLCGTPEY 164

Query: 215 LQSRYYRAPEIILGE 229
           L      APEIIL +
Sbjct: 165 L------APEIILSK 173

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 53.6 bits (128), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+ +R
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTR 182

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 183 YYRAPEVILG 192

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G+IH DLKP N+     V +   +K++DFG A H + A    Y+ +R+
Sbjct: 125 QMLCGLKYIHSAGIIHRDLKPGNL----AVNEDCELKILDFGLARH-ADAEMTGYVVTRW 179

Query: 220 YRAPEIIL 227
           YRAPE+IL
Sbjct: 180 YRAPEVIL 187

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+ +R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 190 YYRAPEVILG 199

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 10/78 (12%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYL 215
           TLQ+L  L  L   G++H D+KP NI L         +K+ DFG A  +          +
Sbjct: 105 TLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG----VIKLGDFGCAVKLKNNTTTMGEEV 160

Query: 216 QS----RYYRAPEIILGE 229
           QS      Y APE+I G 
Sbjct: 161 QSLAGTPAYMAPEVITGG 178

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYLQS 217
           Q+L  +       +IH D+KPENI+    V Q   VK+ DFG A  ++    V   Y+ +
Sbjct: 108 QILRGIEFCHSHNIIHRDIKPENIL----VSQSGVVKLCDFGFARTLAAPGEVYTDYVAT 163

Query: 218 RYYRAPEIILGE 229
           R+YRAPE+++G+
Sbjct: 164 RWYRAPELLVGD 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.4 bits (123), Expect = 7e-08
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 145 PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 204
           P  VL     G + + V+  L  L  L ++H D+KP N MLV+   Q   VK+ DFG ++
Sbjct: 93  PEHVL-----GRIAVAVVKGLTYLWSLKILHRDVKPSN-MLVNTRGQ---VKLCDFGVST 143

Query: 205 HVSKAVCNTYLQSRYYRAPEIILGE 229
            +  ++  TY+ +  Y APE I GE
Sbjct: 144 QLVNSIAKTYVGTNAYMAPERISGE 168

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN--T 213
            +  Q L A+    +   IH D+KPENI++     +  ++K+ DFG A  ++    +   
Sbjct: 104 KIIWQTLQAVNFCHKHNCIHRDVKPENILIT----KQGQIKLCDFGFARILTGPGDDYTD 159

Query: 214 YLQSRYYRAPEIILGE 229
           Y+ +R+YRAPE+++G+
Sbjct: 160 YVATRWYRAPELLVGD 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 51.6 bits (123), Expect = 7e-08
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +    +IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+
Sbjct: 128 QILRGLKYIHSADIIHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRW 182

Query: 220 YRAPEIIL 227
           YRAPEI+L
Sbjct: 183 YRAPEIML 190

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTYLQSR 218
            V+ A   L   G+I+ DLKPEN++L D     Y VK++DFG A  + S     T+  + 
Sbjct: 101 CVVLAFEYLHNRGIIYRDLKPENLLL-D--SNGY-VKLVDFGFAKKLKSGQKTWTFCGTP 156

Query: 219 YYRAPEIILG 228
            Y APEIIL 
Sbjct: 157 EYVAPEIILN 166

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G++H DLKP NI+    + +   +K+ DFG A  +       Y+ +RY
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNIL----INENCDLKICDFGLA-RIQDPQMTGYVSTRY 170

Query: 220 YRAPEIIL 227
           YRAPEI+L
Sbjct: 171 YRAPEIML 178

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 8/72 (11%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV---SKAVCNTYLQ 216
           Q+  AL  +    + H DLKP+N +L+DP    + +K+ DFGSA ++    ++V  +Y+ 
Sbjct: 178 QLCRALAYIHSKFICHRDLKPQN-LLIDP--NTHTLKLCDFGSAKNLLAGQRSV--SYIC 232

Query: 217 SRYYRAPEIILG 228
           SR+YRAPE++LG
Sbjct: 233 SRFYRAPELMLG 244

Length = 440

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +T   L  L  L    +IH D+K  NI+L     +P +VK+ DFGSAS  S A  N+++ 
Sbjct: 126 ITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLADFGSASKSSPA--NSFVG 179

Query: 217 SRYYRAPEIILG 228
           + Y+ APE+IL 
Sbjct: 180 TPYWMAPEVILA 191

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G+IH DLKP N+     V +   +K++DFG A      +   Y+ +R+
Sbjct: 126 QMLKGLKYIHAAGIIHRDLKPGNL----AVNEDCELKILDFGLARQTDSEMTG-YVVTRW 180

Query: 220 YRAPEIIL 227
           YRAPE+IL
Sbjct: 181 YRAPEVIL 188

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +T   L  L  L    +IH D+K  NI+L     +P +VK+ DFGSAS  S A  N+++ 
Sbjct: 130 ITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLADFGSASIASPA--NSFVG 183

Query: 217 SRYYRAPEIILG 228
           + Y+ APE+IL 
Sbjct: 184 TPYWMAPEVILA 195

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G + + VL  L  L  +  +IH D+KP NI LV+   Q   +K+ DFG +  +  ++  T
Sbjct: 103 GKIAVAVLKGLTYLHEKHKIIHRDVKPSNI-LVNSRGQ---IKLCDFGVSGQLVNSLAKT 158

Query: 214 YLQSRYYRAPEIILGE 229
           ++ +  Y APE I G 
Sbjct: 159 FVGTSSYMAPERIQGN 174

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 7/71 (9%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           ++  A+  L +LG IH DLKPEN  L+D       +K+ DFG S   V+ A  N+ + S 
Sbjct: 109 EMFEAVDALHELGYIHRDLKPEN-FLID---ASGHIKLTDFGLSKGIVTYA--NSVVGSP 162

Query: 219 YYRAPEIILGE 229
            Y APE++ G+
Sbjct: 163 DYMAPEVLRGK 173

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 19/74 (25%)

Query: 170 QLGLIHADLKPENIML------VDPVR------QPYRVKVIDFGSA---SHVSKAVCNTY 214
           +L L+H DLKPENI++      VDPV        P RV++ D G      H   A+ +T 
Sbjct: 250 ELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVST- 308

Query: 215 LQSRYYRAPEIILG 228
              R+YR+PE++LG
Sbjct: 309 ---RHYRSPEVVLG 319

Length = 467

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 48.3 bits (116), Expect = 9e-07
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 9/74 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-----SHVSKAVCNTY 214
           Q+L  L  L    +IH DLKP NI+    V     +K+ DFG A         K     Y
Sbjct: 111 QILRGLKYLHSANVIHRDLKPSNIL----VNSNCDLKICDFGLARGVDPDEDEKGFLTEY 166

Query: 215 LQSRYYRAPEIILG 228
           + +R+YRAPE++L 
Sbjct: 167 VVTRWYRAPELLLS 180

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 18/103 (17%)

Query: 129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP 188
           EV R  +      P P AQV       +    +L  +  +   G++H DLKP N+ L+  
Sbjct: 87  EVLRDEE-----RPLPEAQV------KSYMRMLLKGVAYMHANGIMHRDLKPANL-LISA 134

Query: 189 VRQPYRVKVIDFGSASHVSKAVCNTY---LQSRYYRAPEIILG 228
                 +K+ DFG A   S+     Y   + +R+YRAPE++ G
Sbjct: 135 DGV---LKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG 174

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 15/76 (19%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIML---VDPVRQPYRVKVIDFGSA-----SHVSKAVC 211
           Q+L  L  +    ++H DLKP N++L    D       +K+ DFG A      H      
Sbjct: 114 QILRGLKYIHSANVLHRDLKPSNLLLNTNCD-------LKICDFGLARIADPEHDHTGFL 166

Query: 212 NTYLQSRYYRAPEIIL 227
             Y+ +R+YRAPEI+L
Sbjct: 167 TEYVATRWYRAPEIML 182

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G+IH DLKP N+     V +   ++++DFG A      +   Y+ +R+
Sbjct: 126 QLLRGLKYIHSAGIIHRDLKPSNV----AVNEDCELRILDFGLARQADDEMTG-YVATRW 180

Query: 220 YRAPEIIL 227
           YRAPEI+L
Sbjct: 181 YRAPEIML 188

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 14/80 (17%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAV------- 210
           +++ AL  L   G+IH DLKP+NI L+D       +K+ DFG      V + +       
Sbjct: 101 EIVLALEYLHSNGIIHRDLKPDNI-LID---SNGHLKLTDFGLSKVGLVRRQINLNDDEK 156

Query: 211 -CNTYLQSRYYRAPEIILGE 229
                + +  Y APE+ILG+
Sbjct: 157 EDKRIVGTPDYIAPEVILGQ 176

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           VT   L  L  L    +IH D+K  NI+L     +P  VK+ DFGSAS ++ A  N ++ 
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLS----EPGLVKLGDFGSASIMAPA--NXFVG 173

Query: 217 SRYYRAPEIILG 228
           + Y+ APE+IL 
Sbjct: 174 TPYWMAPEVILA 185

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 16/78 (20%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIML-VDPVRQPYRVKVIDFGSASHVSKAVC---NTY 214
            Q+L  L       ++H DLKP+NI++  D V     +K+ DFG A    +A      TY
Sbjct: 105 YQLLRGLAYCHSHRILHRDLKPQNILINRDGV-----LKLADFGLA----RAFGIPLRTY 155

Query: 215 ---LQSRYYRAPEIILGE 229
              + + +YRAPEI+LG 
Sbjct: 156 THEVVTLWYRAPEILLGS 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTY 214
             T Q+L  L  L     +H D+K  NI LVD       VK+ DFG A  V + +   ++
Sbjct: 106 LYTRQILLGLEYLHDRNTVHRDIKGANI-LVDTNGV---VKLADFGMAKQVVEFSFAKSF 161

Query: 215 LQSRYYRAPEIIL 227
             S Y+ APE+I 
Sbjct: 162 KGSPYWMAPEVIA 174

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 148 VLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-----S 202
            L     G + LQVL AL      G++H DLKP+NIM+     +P+  KV+DFG      
Sbjct: 75  ALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPH-AKVLDFGIGTLLP 133

Query: 203 ASHVSKAVCNT----YLQSRYYRAPEIILGE 229
               +     T     L +  Y APE + GE
Sbjct: 134 GVRDADVATLTRTTEVLGTPTYCAPEQLRGE 164

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 13/82 (15%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------ 209
           ++  Q+L  +  L    ++H DLKP NI+++    +   VK+ D G A   +        
Sbjct: 112 SLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLAD 171

Query: 210 ---VCNTYLQSRYYRAPEIILG 228
              V  T     +YRAPE++LG
Sbjct: 172 LDPVVVTI----WYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 45.8 bits (108), Expect = 7e-06
 Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 6/49 (12%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIML-VDPVRQPYRVKVIDFGSA 203
            V  QVLT L KL ++G++H D+KPEN+++ VD      +VK+IDFG+A
Sbjct: 313 GVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG-----QVKIIDFGAA 356

Length = 507

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            + +Q+L  L  L +  ++H DLK  NI+LV        VK+ D G +  + K +  T +
Sbjct: 107 RIFIQLLRGLQALHEQKILHRDLKSANILLV----ANDLVKIGDLGISKVLKKNMAKTQI 162

Query: 216 QSRYYRAPEI 225
            + +Y APE+
Sbjct: 163 GTPHYMAPEV 172

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 157 VTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNT 213
           +  Q+L  L  L  +  +IH D+KP N++    +     VK+ DFG +  +  +   CNT
Sbjct: 104 IARQILKGLDYLHTKRHIIHRDIKPSNLL----INSKGEVKIADFGISKVLENTLDQCNT 159

Query: 214 YLQSRYYRAPEIILGE 229
           ++ +  Y +PE I GE
Sbjct: 160 FVGTVTYMSPERIQGE 175

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 153 PPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN 212
             G +   VL  L  L    +IH D+KP NI+L    R+  +VK+ DFG +  +  ++  
Sbjct: 106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKG-QVKLCDFGVSGELVNSLAG 161

Query: 213 TYLQSRYYRAPEIILGE 229
           T+  + +Y APE I G+
Sbjct: 162 TFTGTSFYMAPERIQGK 178

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVCNTYLQS 217
           ++  AL  L Q G+I+ DLKPENI+L         VK+ DFG    S     V +T+  +
Sbjct: 108 EISLALEHLHQQGIIYRDLKPENILL----DAQGHVKLTDFGLCKESIHEGTVTHTFCGT 163

Query: 218 RYYRAPEII 226
             Y APEI+
Sbjct: 164 IEYMAPEIL 172

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 6/69 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQS 217
           ++L  L  L Q  +IH D+K +N++L +       VK++DFG ++ + + V   NT++ +
Sbjct: 119 EILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVKLVDFGVSAQLDRTVGRRNTFIGT 174

Query: 218 RYYRAPEII 226
            Y+ APE+I
Sbjct: 175 PYWMAPEVI 183

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 205
           N+   +LT L  + + G+ H D+KPENIM    V    R  +ID+G ASH
Sbjct: 130 NIMKDMLTTLEYIHEHGISHGDIKPENIM----VDGNNRGYIIDYGIASH 175

Length = 294

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
              Q+L  L  L   G++H D+K  NI L++       +K+ DFG A   +K     Y  
Sbjct: 105 YMKQLLEGLQYLHSNGILHRDIKGSNI-LIN---NDGVLKLADFGLARPYTKRNSADY-T 159

Query: 217 SR----YYRAPEIILGE 229
           +R    +YR PE++LG 
Sbjct: 160 NRVITLWYRPPELLLGA 176

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQS 217
           + L  L  L +  +IH D+K +NI+L         VK++DFG ++ +   +   NT++ +
Sbjct: 121 ETLRGLAYLHENKVIHRDIKGQNILLTKNA----EVKLVDFGVSAQLDSTLGRRNTFIGT 176

Query: 218 RYYRAPEIILGE 229
            Y+ APE+I  +
Sbjct: 177 PYWMAPEVIACD 188

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V  +VL  L  L    +IH D+K +NI+L     +   VK+ DFG A+ ++K     N+ 
Sbjct: 121 VCREVLQGLEYLHSQNVIHRDIKSDNILL----SKDGSVKLADFGFAAQLTKEKSKRNSV 176

Query: 215 LQSRYYRAPEIILG 228
           + + Y+ APE+I  
Sbjct: 177 VGTPYWMAPEVIKR 190

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 16/78 (20%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
               +V+  +  L Q G+IH D+KPEN +L+D   Q   +K+ DFG    +S+       
Sbjct: 101 QYIAEVVLGVEDLHQRGIIHRDIKPEN-LLID---QTGHLKLTDFG----LSRNG---LE 149

Query: 216 QSRY-----YRAPEIILG 228
             ++     Y APE ILG
Sbjct: 150 NKKFVGTPDYLAPETILG 167

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           +  +VL AL  + ++G+IH D+K  NI+    V     VK+ DFG A+ +++     +T+
Sbjct: 106 IIREVLVALKYIHKVGVIHRDIKAANIL----VTNTGNVKLCDFGVAALLNQNSSKRSTF 161

Query: 215 LQSRYYRAPEIILG 228
           + + Y+ APE+I  
Sbjct: 162 VGTPYWMAPEVITE 175

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V  + L  L  L + G IH D+K  NI+L +       VK+ DFG ++ ++  +    ++
Sbjct: 106 VCRETLKGLAYLHETGKIHRDIKGANILLTE----DGDVKLADFGVSAQLTATIAKRKSF 161

Query: 215 LQSRYYRAPEII 226
           + + Y+ APE+ 
Sbjct: 162 IGTPYWMAPEVA 173

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLV-DPVRQPYRVKVIDFGSASHVSKAV--CNTYLQ 216
           QVL  L  L + G+IH D+K  NI+   D V     VK+ DFG A+ ++       + + 
Sbjct: 107 QVLQGLAYLHEQGVIHRDIKAANILTTKDGV-----VKLADFGVATKLNDVSKDDASVVG 161

Query: 217 SRYYRAPEIILGE 229
           + Y+ APE+I   
Sbjct: 162 TPYWMAPEVIEMS 174

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 10/83 (12%)

Query: 152 APPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 208
            PP  V     Q++ A+    +  ++H D+KPEN++    +     +K+ DFG A ++S+
Sbjct: 97  VPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLL----ISHNDVLKLCDFGFARNLSE 152

Query: 209 ---AVCNTYLQSRYYRAPEIILG 228
              A    Y+ +R+YR+PE++LG
Sbjct: 153 GSNANYTEYVATRWYRSPELLLG 175

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 17/106 (16%)

Query: 126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIML 185
           + M+   R        P    +        +   Q+L  +    + G++H DLKP+N+ L
Sbjct: 94  KFMDSNGRGPGRPL--PAKTIK--------SFMYQLLKGVAHCHKHGVMHRDLKPQNL-L 142

Query: 186 VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 228
           VD  +Q   +K+ D G     S  V  +Y     + +YRAPE++LG
Sbjct: 143 VD--KQKGLLKIADLGLGRAFSIPV-KSYTHEIVTLWYRAPEVLLG 185

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-----SASHVSKAVCNT- 213
           Q+L  L  +    ++H DLKP N++    V     +K+ DFG     S +    A   T 
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGNLL----VNADCELKICDFGLARGFSENPGENAGFMTE 168

Query: 214 YLQSRYYRAPEIIL 227
           Y+ +R+YRAPEI+L
Sbjct: 169 YVATRWYRAPEIML 182

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 156 NVTLQVLTAL-----LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS--HVSK 208
            +  Q+L AL            ++H DLKP NI L         VK+ DFG A       
Sbjct: 109 RILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN----NVKLGDFGLAKILGHDS 164

Query: 209 AVCNTYLQSRYYRAPEIILGE 229
           +   TY+ + YY +PE +   
Sbjct: 165 SFAKTYVGTPYYMSPEQLNHM 185

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           +  +VL  L  L + G IH D+K  NI+L +       VK+ DFG +  ++  +   NT+
Sbjct: 103 ILREVLLGLEYLHEEGKIHRDIKAANILLSEEG----DVKLADFGVSGQLTSTMSKRNTF 158

Query: 215 LQSRYYRAPEII 226
           + + ++ APE+I
Sbjct: 159 VGTPFWMAPEVI 170

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 42.5 bits (101), Expect = 8e-05
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
            I S++AR Y+      + +      L   +L    +   E IDLL++ML  D  ++RIT
Sbjct: 233 FITSEKARNYL----KSLPKKP-KKPLS--KLFPGAS--PEAIDLLEKMLVFD-PKKRIT 282

Query: 98  PGEALNHAFVTLAHLVD 114
             EAL H +  LA L D
Sbjct: 283 ADEALAHPY--LAQLHD 297

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQS 217
           ++L  L  L    +IH D+K +N++L +       VK++DFG ++ + + V   NT++ +
Sbjct: 129 EILRGLAHLHAHKVIHRDIKGQNVLLTENA----EVKLVDFGVSAQLDRTVGRRNTFIGT 184

Query: 218 RYYRAPEII 226
            Y+ APE+I
Sbjct: 185 PYWMAPEVI 193

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           Q+L  L  +    +IH DLKP N++    V +   +++ DFG      S+    K     
Sbjct: 115 QLLRGLKYIHSANVIHRDLKPSNLL----VNEDCELRIGDFGMARGLSSSPTEHKYFMTE 170

Query: 214 YLQSRYYRAPEIIL 227
           Y+ +R+YRAPE++L
Sbjct: 171 YVATRWYRAPELLL 184

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 164 ALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRA 222
           AL  L   G+IH D+KP+NI+L D   Q + V + DF  A+ V+     T    +  Y A
Sbjct: 112 ALEYLHSKGIIHRDIKPDNILL-D--EQGH-VHITDFNIATKVTPDTLTTSTSGTPGYMA 167

Query: 223 PEII 226
           PE++
Sbjct: 168 PEVL 171

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 17/79 (21%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS--------HVSKA 209
             Q+L  L  L   G++H D+KP N++    V     +K+ DFG A         H+++ 
Sbjct: 109 LYQILRGLKYLHSAGILHRDIKPGNLL----VNSNCVLKICDFGLARVEEPDESKHMTQE 164

Query: 210 VCNTYLQSRYYRAPEIILG 228
           V      ++YYRAPEI++G
Sbjct: 165 VV-----TQYYRAPEILMG 178

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 155 GNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--N 212
             V L VL AL  L   G+IH D+K ++I+L        R+K+ DFG  + VSK V    
Sbjct: 121 ATVCLSVLRALSYLHNQGVIHRDIKSDSILLT----SDGRIKLSDFGFCAQVSKEVPKRK 176

Query: 213 TYLQSRYYRAPEII 226
           + + + Y+ APE+I
Sbjct: 177 SLVGTPYWMAPEVI 190

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 155 GNVTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G + + V+  L  L     ++H D+KP NI+    V    ++K+ DFG +  +  ++ +T
Sbjct: 106 GKIAVAVVEGLTYLYNVHRIMHRDIKPSNIL----VNSRGQIKLCDFGVSGELINSIADT 161

Query: 214 YLQSRYYRAPEIILGE 229
           ++ +  Y +PE I G 
Sbjct: 162 FVGTSTYMSPERIQGG 177

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 148 VLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHV 206
           VL PA   +  L  L  L  L    ++H DLKP N+ L+        +K+ DFG A S  
Sbjct: 98  VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNL-LIASDGV---LKLADFGLARSFG 153

Query: 207 SKAVCNTY-LQSRYYRAPEIILG 228
           S     T+ + +R+YRAPE++ G
Sbjct: 154 SPNRKMTHQVVTRWYRAPELLFG 176

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V L VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + VSK V    + 
Sbjct: 121 VCLAVLKALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGFCAQVSKEVPRRKSL 176

Query: 215 LQSRYYRAPEII 226
           + + Y+ APE+I
Sbjct: 177 VGTPYWMAPELI 188

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 155 GNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G V++ VL  L  L++   ++H D+KP NI+    V     +K+ DFG +  +  ++ N+
Sbjct: 106 GKVSIAVLRGLAYLREKHQIMHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANS 161

Query: 214 YLQSRYYRAPEIILG 228
           ++ +R Y +PE + G
Sbjct: 162 FVGTRSYMSPERLQG 176

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 12/79 (15%)

Query: 156 NVTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 214
           N+ +Q++ AL  L K+  ++H DL P NIML +      +V + DFG A         + 
Sbjct: 117 NIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE----DDKVTITDFGLAKQKQP---ESK 169

Query: 215 LQSR----YYRAPEIILGE 229
           L S      Y  PEI+  E
Sbjct: 170 LTSVVGTILYSCPEIVKNE 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 155 GNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G +++ VL  L  L++   ++H D+KP NI+    V     +K+ DFG +  +  ++ N+
Sbjct: 102 GKISIAVLRGLTYLREKHKIMHRDVKPSNIL----VNSRGEIKLCDFGVSGQLIDSMANS 157

Query: 214 YLQSRYYRAPEIILG 228
           ++ +R Y +PE + G
Sbjct: 158 FVGTRSYMSPERLQG 172

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)

Query: 145 PAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 203
           P Q+L     G V++ V+  L  L++   ++H D+KP NI+    V     +K+ DFG +
Sbjct: 101 PEQIL-----GKVSIAVIKGLTYLREKHKIMHRDVKPSNIL----VNSRGEIKLCDFGVS 151

Query: 204 SHVSKAVCNTYLQSRYYRAPEIILG 228
             +  ++ N+++ +R Y +PE + G
Sbjct: 152 GQLIDSMANSFVGTRSYMSPERLQG 176

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSAS-----HVSKAVC 211
           T Q+L  +  L    ++H D+K  NI+     R     VK+ DFG++        S    
Sbjct: 110 TRQILEGVEYLHSNMIVHRDIKGANIL-----RDSAGNVKLGDFGASKRLQTICSSGTGM 164

Query: 212 NTYLQSRYYRAPEIILGE 229
            +   + Y+ +PE+I GE
Sbjct: 165 KSVTGTPYWMSPEVISGE 182

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)

Query: 145 PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 204
           P   L P    ++  Q+L  +  L    ++H DLKP+NI+    V    +VK+ DFG   
Sbjct: 100 PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNIL----VTSDGQVKIADFG--- 152

Query: 205 HVSKAVCNTY-LQS----RYYRAPEIILG 228
            +++       L S     +YRAPE++L 
Sbjct: 153 -LARIYSFEMALTSVVVTLWYRAPEVLLQ 180

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYLQ 216
             Q++  L  L Q  +++ DLKPEN++L D       V++ D G A  +           
Sbjct: 101 AAQIICGLEHLHQRRIVYRDLKPENVLLDD----HGNVRISDLGLAVELKGGKKIKGRAG 156

Query: 217 SRYYRAPEIILGE 229
           +  Y APE++ GE
Sbjct: 157 TPGYMAPEVLQGE 169

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA---SHVSKAVCNTYL 215
           +Q+  AL  L    ++H D+KP+NI L         VK+ DFG +   S  +  +  T +
Sbjct: 110 VQLCLALKYLHSRKILHRDIKPQNIFL----TSNGLVKLGDFGISKVLSS-TVDLAKTVV 164

Query: 216 QSRYYRAPEIILGE 229
            + YY +PE+   +
Sbjct: 165 GTPYYLSPELCQNK 178

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 204
           ++L  L +L  L L H DL P NI+ VD  +      +ID+  A 
Sbjct: 97  ELLAKLHQLPLLVLCHGDLHPGNIL-VDDGKILG---IIDWEYAG 137

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V L VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + VSK V    + 
Sbjct: 120 VCLAVLKALSFLHAQGVIHRDIKSDSILLT----SDGRVKLSDFGFCAQVSKEVPRRKSL 175

Query: 215 LQSRYYRAPEII 226
           + + Y+ APE+I
Sbjct: 176 VGTPYWMAPEVI 187

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 23/92 (25%)

Query: 143 PPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFG 201
           P P  +L     G +T+ ++ AL  LK+  G+IH D+KP NI L+D       VK+ DFG
Sbjct: 110 PIPEDIL-----GKMTVAIVKALHYLKEKHGVIHRDVKPSNI-LLDASGN---VKLCDFG 160

Query: 202 -------SASHVSKAVCNTYLQSRYYRAPEII 226
                  S +    A C  Y+      APE I
Sbjct: 161 ISGRLVDSKAKTRSAGCAAYM------APERI 186

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G + + ++ AL  L  +L +IH D+KP N+ L++   Q   VK+ DFG + ++  +V  T
Sbjct: 106 GKIAVSIVKALEYLHSKLSVIHRDVKPSNV-LINRNGQ---VKLCDFGISGYLVDSVAKT 161

Query: 214 Y-LQSRYYRAPEIILGE 229
                + Y APE I  E
Sbjct: 162 IDAGCKPYMAPERINPE 178

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 14/69 (20%)

Query: 164 ALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG----SASHVSKA--VCNTYLQS 217
           AL  L  LG+I+ DLKPENI+L     +   +K+ DFG    S  H  KA   C T    
Sbjct: 110 ALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 162

Query: 218 RYYRAPEII 226
             Y APE++
Sbjct: 163 -EYMAPEVV 170

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFV 107
             IDLL++ML +D  ++RIT  EAL H ++
Sbjct: 273 LAIDLLEKMLVLD-PDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           E IDLL +ML  +   +RI+  EAL H +
Sbjct: 254 EGIDLLSKMLQYNP-AKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 7/72 (9%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTY 214
           T +V+ AL  +  +G IH D+KP+N ML+D   +   +K+ DFG+   ++K     C+T 
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDN-MLLD---KSGHLKLADFGTCMKMNKEGMVRCDTA 203

Query: 215 LQSRYYRAPEII 226
           + +  Y +PE++
Sbjct: 204 VGTPDYISPEVL 215

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 154 PGNVTL---QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSK 208
           P NV L   Q+L  L  + Q  ++H DLKP+N+++ D       +K+ DFG   A  V  
Sbjct: 102 PENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD----TGELKLADFGLARAKSVPS 157

Query: 209 AVCNTYLQSRYYRAPEIILG 228
              +  + + +YR P+++LG
Sbjct: 158 HTYSNEVVTLWYRPPDVLLG 177

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTY 214
           +  Q L  L  L     IH D+K  NI L++   Q    K+ DFG +  ++   A  NT 
Sbjct: 104 ILYQTLKGLEYLHSNKKIHRDIKAGNI-LLNEEGQ---AKLADFGVSGQLTDTMAKRNTV 159

Query: 215 LQSRYYRAPEIIL 227
           + + ++ APE+I 
Sbjct: 160 IGTPFWMAPEVIQ 172

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA---SHVSKAVCNT 213
           + LQ+L  L  L +  +IH DLK  N++L D       +K+ DFG A      +K +   
Sbjct: 113 LMLQLLRGLQYLHENFIIHRDLKVSNLLLTD----KGCLKIADFGLARTYGLPAKPMTPK 168

Query: 214 YLQSRYYRAPEIILG 228
            + + +YRAPE++LG
Sbjct: 169 VV-TLWYRAPELLLG 182

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 11/70 (15%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTYLQ 216
           +++ A   L    +I+ DLKPEN++L         VKV DFG A  V      +C T   
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKPENLLL----DNKGHVKVTDFGFAKKVPDRTFTLCGT--- 178

Query: 217 SRYYRAPEII 226
              Y APE+I
Sbjct: 179 -PEYLAPEVI 187

Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTY 214
           T +V+ AL  +  +G IH D+KP+N ML+D   +   +K+ DFG+   +       C+T 
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDN-MLLD---KSGHLKLADFGTCMKMDANGMVRCDTA 203

Query: 215 LQSRYYRAPEIILGE 229
           + +  Y +PE++  +
Sbjct: 204 VGTPDYISPEVLKSQ 218

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 157 VTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
           +T  V+  L  LK +  +IH D+KP N++    V    +VK+ DFG + ++  ++  T +
Sbjct: 107 ITYAVVKGLKFLKEEHNIIHRDVKPTNVL----VNGNGQVKLCDFGVSGNLVASLAKTNI 162

Query: 216 QSRYYRAPEIILGE 229
             + Y APE I   
Sbjct: 163 GCQSYMAPERIKSG 176

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTY 214
           ++  Q+L  L  L    ++H DLKP+NI+    V    ++K+ DFG A   S +    + 
Sbjct: 114 DMMFQLLRGLDFLHSHRVVHRDLKPQNIL----VTSSGQIKLADFGLARIYSFQMALTSV 169

Query: 215 LQSRYYRAPEIIL 227
           + + +YRAPE++L
Sbjct: 170 VVTLWYRAPEVLL 182

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 7/70 (10%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS---KAVCNTYLQ 216
           +++ A+  + Q+G +H D+KPEN+ L+D   +   +K+ DFGSA+ ++          + 
Sbjct: 110 ELVLAIHSVHQMGYVHRDIKPENV-LID---RTGHIKLADFGSAARLTANKMVNSKLPVG 165

Query: 217 SRYYRAPEII 226
           +  Y APE++
Sbjct: 166 TPDYIAPEVL 175

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 39.6 bits (92), Expect = 8e-04
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 7/72 (9%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTY 214
           T +V+ AL  +  +GLIH D+KP+N ML+D   +   +K+ DFG+   + +     C+T 
Sbjct: 148 TAEVVLALDAIHSMGLIHRDVKPDN-MLLD---KHGHLKLADFGTCMKMDETGMVRCDTA 203

Query: 215 LQSRYYRAPEII 226
           + +  Y +PE++
Sbjct: 204 VGTPDYISPEVL 215

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 77  REFIDLLKRMLTMDQVERRITPGEALNHAFV 107
            E  DL++++L  D  E+R+T  EAL H F 
Sbjct: 225 PEAKDLIRKLLVKD-PEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 29  LTKIGLPET----SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLK 84
           L+ +G P       I S   RKYI N          P        +  KA   E +DLL 
Sbjct: 225 LSVLGSPSEEVLNRIGSDRVRKYIQNLPR-----KQPVPWSK---IFPKASP-EALDLLS 275

Query: 85  RMLTMDQVERRITPGEALNHAFVTLAHLVDYA 116
           +ML  D  E RIT  +AL H F+   H  D  
Sbjct: 276 QMLQFDP-EERITVEQALQHPFLAQYHDPDDE 306

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 155 GNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G + +  + AL  LK+ L +IH D+KP NI+L     +   +K+ DFG +  +  ++  T
Sbjct: 110 GKIAVATVKALNYLKEELKIIHRDVKPSNILL----DRNGNIKLCDFGISGQLVDSIAKT 165

Query: 214 Y-LQSRYYRAPEII 226
                R Y APE I
Sbjct: 166 RDAGCRPYMAPERI 179

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 161 VLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN--TYLQSR 218
           VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + +SK V    + + + 
Sbjct: 126 VLQALCYLHSQGVIHRDIKSDSILLT----LDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181

Query: 219 YYRAPEII 226
           Y+ APE+I
Sbjct: 182 YWMAPEVI 189

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--SHVSKAVCNTYLQS 217
           Q+L  L  +    ++H DLKP N++L         +K+ DFG A  +         Y+ +
Sbjct: 116 QLLRGLKYIHSANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSEKGDFMTEYVVT 171

Query: 218 RYYRAPEIIL 227
           R+YRAPE++L
Sbjct: 172 RWYRAPELLL 181

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 204
           Q+L AL  L   G++H D+KP+NI+  +        K+ID G+A+
Sbjct: 263 QILFALDGLHSTGIVHRDVKPQNIIFSEGSG---SFKIIDLGAAA 304

Length = 566

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---AVCNTYLQ 216
           +++ AL  L    +++ DLKPENI+L     +   +K+ DFG A  +      +C T   
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENILL----DKEGHIKLTDFGFAKKLRDRTWTLCGT--- 161

Query: 217 SRYYRAPEII 226
              Y APE+I
Sbjct: 162 -PEYLAPEVI 170

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 155 GNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH----VSKAV 210
           G + +QVL A+  +    +IH D+K  NI+L         VK+ DFG +      VS  V
Sbjct: 146 GLLFIQVLLAVHHVHSKHMIHRDIKSANILLC----SNGLVKLGDFGFSKMYAATVSDDV 201

Query: 211 CNTYLQSRYYRAPEI 225
             T+  + YY APEI
Sbjct: 202 GRTFCGTPYYVAPEI 216

Length = 496

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 141 APPP--PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 198
            PPP  PA+ +      ++  Q L  L  L    ++H DLKPENI+    V    +VK+ 
Sbjct: 100 VPPPGLPAETI-----KDLMRQFLRGLDFLHANCIVHRDLKPENIL----VTSGGQVKLA 150

Query: 199 DFGSASHVS-KAVCNTYLQSRYYRAPEIIL 227
           DFG A   S +      + + +YRAPE++L
Sbjct: 151 DFGLARIYSCQMALTPVVVTLWYRAPEVLL 180

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSK-AVCNTYLQS 217
           +++ AL  L +  +++ DLKPENI+L         + + DFG S ++++     NT+  +
Sbjct: 104 ELVLALEHLHKYDIVYRDLKPENILL----DATGHIALCDFGLSKANLTDNKTTNTFCGT 159

Query: 218 RYYRAPEIILGE 229
             Y APE++L E
Sbjct: 160 TEYLAPEVLLDE 171

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-- 213
           N T Q+L  L  L +  +IH D+K  N+ L+D   Q  R+++ DFG+A+ ++        
Sbjct: 107 NYTEQLLRGLSYLHENQIIHRDVKGANL-LIDSTGQ--RLRIADFGAAARLAAKGTGAGE 163

Query: 214 ----YLQSRYYRAPEIILGE 229
                L +  + APE++ GE
Sbjct: 164 FQGQLLGTIAFMAPEVLRGE 183

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 9/71 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA----SHVSKAVCNT-Y 214
           Q+L AL  +    + H DLKP+NI+         ++K+ DFG A    +    A+  T Y
Sbjct: 111 QLLRALKYIHTANVFHRDLKPKNIL----ANADCKLKICDFGLARVAFNDTPTAIFWTDY 166

Query: 215 LQSRYYRAPEI 225
           + +R+YRAPE+
Sbjct: 167 VATRWYRAPEL 177

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 14/90 (15%)

Query: 26  RRALTKIGLPETS----IKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFID 81
           +R +  +G P       I S+ ARKYI   L  + Q ++     G   LA        ID
Sbjct: 226 KRIMEVVGTPSPEVLKKISSEHARKYI-QSLPHMPQQDLKKIFRGANPLA--------ID 276

Query: 82  LLKRMLTMDQVERRITPGEALNHAFVTLAH 111
           LL++ML +D  ++RI+  EAL H + +  H
Sbjct: 277 LLEKMLVLDS-DKRISASEALAHPYFSQYH 305

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 205
           L  L ALL    L L+H DL P N+++    R      VIDF  A  
Sbjct: 153 LAALLALLPALPLVLVHGDLHPGNLLVDPGGRV---TGVIDFEDAGL 196

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 164 ALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS 204
           AL  + +LG IH D+KP+NI L+D       +K+ DFG   
Sbjct: 113 ALDSVHKLGFIHRDIKPDNI-LID---ADGHIKLADFGLCK 149

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-----AVCNTY 214
           Q+L  +  L    ++H DLKP NI+++    +  RVK+ D G A   +      A  +  
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175

Query: 215 LQSRYYRAPEIILG 228
           + + +YRAPE++LG
Sbjct: 176 VVTFWYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-----AVCNTY 214
           Q+L  +  L    ++H DLKP NI+++    +  RVK+ D G A   +      A  +  
Sbjct: 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 175

Query: 215 LQSRYYRAPEIILG 228
           + + +YRAPE++LG
Sbjct: 176 VVTFWYRAPELLLG 189

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT--YL 215
           T Q+++ L  L Q  +I+ DLKPEN++L +       V++ D G A  +      T  Y 
Sbjct: 103 TAQIISGLEHLHQRRIIYRDLKPENVLLDN----DGNVRISDLGLAVELKDGQSKTKGYA 158

Query: 216 QSRYYRAPEIILGE 229
            +  + APE++ GE
Sbjct: 159 GTPGFMAPELLQGE 172

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q+L AL  +    ++H DLK +NI+L    +    VK+ DFG S    SK+   T + + 
Sbjct: 109 QILLALHHVHTKLILHRDLKTQNILL---DKHKMVVKIGDFGISKILSSKSKAYTVVGTP 165

Query: 219 YYRAPEIILGE 229
            Y +PE+  G+
Sbjct: 166 CYISPELCEGK 176

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT 213
            T QVL  L  L   G++H DLK +N+ LVD        K+ DFG +           N 
Sbjct: 113 FTEQVLEGLAYLHSKGILHRDLKADNL-LVD---ADGICKISDFGISKKSDDIYDNDQNM 168

Query: 214 YLQ-SRYYRAPEII 226
            +Q S ++ APE+I
Sbjct: 169 SMQGSVFWMAPEVI 182

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)

Query: 149 LVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 208
           L P    + T Q+L  +    +  ++H DLKP+N+++     +   +K+ DFG A     
Sbjct: 97  LDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI----NKRGELKLADFGLARAFGI 152

Query: 209 AVCNTY---LQSRYYRAPEIILG 228
            V NT+   + + +YRAP+++LG
Sbjct: 153 PV-NTFSNEVVTLWYRAPDVLLG 174

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 7/59 (11%)

Query: 173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ---SRYYRAPEIILG 228
           ++H DLKP+N +L+D  R+   +K+ DFG A      V  T+     + +YRAPEI+LG
Sbjct: 123 VLHRDLKPQN-LLID--RRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLG 177

Length = 294

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG--SASHVSKAVCNTYL 215
           T ++L AL  L +  +I+ DLKPENI+L         + + DFG    +       NT+ 
Sbjct: 99  TAELLCALENLHKFNVIYRDLKPENILL----DYQGHIALCDFGLCKLNMKDDDKTNTFC 154

Query: 216 QSRYYRAPEIILG 228
            +  Y APE++LG
Sbjct: 155 GTPEYLAPELLLG 167

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 144 PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA 203
           P  Q +      +   Q+L  +L      ++H DLKP+N +L+D       +K+ DFG A
Sbjct: 93  PKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQN-LLID---NKGVIKLADFGLA 148

Query: 204 SHVSKAVCNTYLQ---SRYYRAPEIILG 228
                 V   Y     + +YRAPE++LG
Sbjct: 149 RAFGIPV-RVYTHEVVTLWYRAPEVLLG 175

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 10/73 (13%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC------NT 213
           +VL  L  L   G IH D+K  NI+L +       VK+ DFG ++ ++           T
Sbjct: 110 EVLKGLEYLHSNGQIHRDIKAGNILLGE----DGSVKIADFGVSASLADGGDRTRKVRKT 165

Query: 214 YLQSRYYRAPEII 226
           ++ +  + APE++
Sbjct: 166 FVGTPCWMAPEVM 178

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V+ + L  L  L   G +H D+K  NI+L D       VK+ DFG ++ ++  +    ++
Sbjct: 111 VSRETLQGLYYLHSKGKMHRDIKGANILLTD----NGHVKLADFGVSAQITATIAKRKSF 166

Query: 215 LQSRYYRAPEI 225
           + + Y+ APE+
Sbjct: 167 IGTPYWMAPEV 177

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTYLQS 217
           +++  L  L + G+I+ DLK +N++L     +   +K+ DFG        +   +T+  +
Sbjct: 104 EIICGLQFLHKKGIIYRDLKLDNVLL----DKDGHIKIADFGMCKENMNGEGKASTFCGT 159

Query: 218 RYYRAPEIILGE 229
             Y APEI+ G+
Sbjct: 160 PDYIAPEILKGQ 171

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQS 217
           Q+L AL  L  + +IH DLK  N++L         +K+ DFG ++   K +   ++++ +
Sbjct: 118 QMLEALQYLHSMKIIHRDLKAGNVLLT----LDGDIKLADFGVSAKNVKTLQRRDSFIGT 173

Query: 218 RYYRAPEIILGE 229
            Y+ APE+++ E
Sbjct: 174 PYWMAPEVVMCE 185

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 6/73 (8%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNT 213
           +V  Q+L+ +  L +  ++H D+KP N +L++  +    VK+ DFG +  +++ +  CN+
Sbjct: 172 DVARQILSGIAYLHRRHIVHRDIKPSN-LLINSAK---NVKIADFGVSRILAQTMDPCNS 227

Query: 214 YLQSRYYRAPEII 226
            + +  Y +PE I
Sbjct: 228 SVGTIAYMSPERI 240

Length = 353

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
KOG0595|consensus	429		100.0
KOG0615|consensus	475		100.0
KOG0575|consensus	592		100.0
KOG0600|consensus	560		100.0
KOG0581|consensus	364		100.0
KOG0593|consensus	396		100.0
KOG0598|consensus	357		100.0
KOG0616|consensus	355		100.0
KOG0661|consensus	538		100.0
KOG0663|consensus	419		100.0
KOG0591|consensus	375		100.0
KOG0659|consensus	318		100.0
KOG0583|consensus	370		100.0
KOG0585|consensus	576		100.0
KOG0611|consensus	668		100.0
KOG0192|consensus	362		100.0
KOG0580|consensus	281		100.0
KOG0592|consensus	604		100.0
KOG0605|consensus	550		100.0
KOG0198|consensus	313		100.0
KOG0594|consensus	323		100.0
KOG0694|consensus	694		100.0
KOG0658|consensus	364		100.0
KOG0597|consensus	808		100.0
KOG0660|consensus	359		100.0
KOG4250|consensus	732		100.0
KOG0588|consensus	786		99.98
KOG0582|consensus	516		99.97
KOG0032|consensus	382		99.97
KOG4236|consensus	888		99.97
KOG1187|consensus	361		99.97
KOG0578|consensus	550		99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
KOG0577|consensus	948		99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
KOG0033|consensus	355		99.97
KOG0201|consensus	467		99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
KOG0610|consensus	459		99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
KOG0586|consensus	596		99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
KOG0599|consensus	411		99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0589|consensus	426		99.97
KOG0197|consensus	468		99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
KOG4717|consensus	864		99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
KOG0584|consensus	632		99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
KOG0690|consensus	516		99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
KOG3653|consensus	534		99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
KOG0607|consensus	463		99.96
KOG0667|consensus	586		99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
KOG0986|consensus	591		99.96
KOG0662|consensus	292		99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
KOG4645|consensus	1509		99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
KOG0664|consensus	449		99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
KOG0666|consensus	438		99.96
KOG0574|consensus	502		99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
KOG0193|consensus	678		99.96
KOG1989|consensus	738		99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
KOG0612|consensus	1317		99.96
KOG0579|consensus	1187		99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
KOG0604|consensus	400		99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
KOG1152|consensus	772		99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
KOG2052|consensus	513		99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
KOG4721|consensus	904		99.95
KOG1151|consensus	775		99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
KOG0669|consensus	376		99.95
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
KOG0194|consensus	474		99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
KOG4279|consensus	1226		99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
KOG0614|consensus	732		99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
KOG0696|consensus	683		99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
KOG0587|consensus	953		99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
KOG1035|consensus	1351		99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
KOG0695|consensus	593		99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.94
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.94
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.93
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.93
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.93
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.93
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
KOG2345|consensus	302		99.93
KOG0196|consensus	996		99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
KOG0608|consensus	1034		99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.93
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.93
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.93
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.93
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.93
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.93
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.93
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.93
KOG1095|consensus	1025		99.93
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
KOG1094|consensus	807		99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.93
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.93
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.93
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.92
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.92
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.92
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.92
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
KOG1026|consensus	774		99.92
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.92
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.92
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.92
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.92
KOG0576|consensus	829		99.92
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.92
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.92
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.92
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.92
KOG0984|consensus	282		99.92
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.92
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.92
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
PHA02882	294	putative serine/threonine kinase; Provisional	99.91
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.91
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.91
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.91
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.91
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.91
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.91
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.91
KOG0668|consensus	338		99.91
KOG0983|consensus	391		99.91
KOG4278|consensus	1157		99.91
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.91
KOG0665|consensus	369		99.9
KOG1027|consensus	903		99.9
KOG0671|consensus	415		99.9
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.9
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.9
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.9
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.89
KOG1006|consensus	361		99.89
KOG1345|consensus	378		99.89
KOG4257|consensus	974		99.89
KOG0199|consensus	1039		99.89
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.88
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.88
KOG0603|consensus	612		99.87
KOG0596|consensus	677		99.87
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG1167|consensus	418		99.86
smart00090	237	RIO RIO-like kinase.	99.85
KOG0670|consensus	752		99.85
KOG0200|consensus	609		99.84
KOG1025|consensus	1177		99.83
PRK10345	210	hypothetical protein; Provisional	99.83
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.83
KOG1163|consensus	341		99.82
PRK14879	211	serine/threonine protein kinase; Provisional	99.8
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.8
KOG1290|consensus	590		99.79
KOG1164|consensus	322		99.79
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.79
KOG1165|consensus	449		99.79
PRK12274	218	serine/threonine protein kinase; Provisional	99.79
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.77
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.76
KOG1166|consensus	974		99.76
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.75
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.74
KOG0590|consensus	601		99.74
PLN00181	793	protein SPA1-RELATED; Provisional	99.74
KOG1024|consensus	563		99.67
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.64
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.63
KOG0603|consensus	612		99.56
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.51
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.49
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.48
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.47
KOG1033|consensus	516		99.45
KOG3087|consensus	229		99.44
KOG4158|consensus	598		99.41
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.41
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.36
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.35
KOG0606|consensus	1205		99.34
KOG1240|consensus	1431		99.28
KOG0590|consensus	601		99.22
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.2
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.19
KOG0195|consensus	448		99.14
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.05
KOG1023|consensus	484		99.04
KOG0601|consensus	524		98.94
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.93
KOG1235|consensus	538		98.78
KOG3741|consensus	655		98.76
KOG1243|consensus	690		98.76
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.75
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.73
KOG1266|consensus	458		98.7
PRK09902	216	hypothetical protein; Provisional	98.68
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.68
KOG0601|consensus	524		98.63
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.23
KOG0606|consensus	1205		98.18
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.11
PLN02876	822	acyl-CoA dehydrogenase	98.03
PF01636	239	APH: Phosphotransferase enzyme family This family	98.01
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.99
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.98
KOG0576|consensus	829		97.92
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.75
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.61
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.58
KOG2270|consensus	520		97.57
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.56
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.54
KOG2137|consensus	700		97.32
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.3
PRK10593	297	hypothetical protein; Provisional	97.23
COG4248	637	Uncharacterized protein with protein kinase and he	97.16
KOG2268|consensus	465		97.04
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.01
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.95
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	96.46
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.44
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.34
PRK12396	409	5-methylribose kinase; Reviewed	96.29
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.02
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.94
PRK05231	319	homoserine kinase; Provisional	95.8
KOG1290|consensus	590		95.68
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.65
PRK10271	188	thiK thiamine kinase; Provisional	95.13
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.08
KOG1234|consensus	363		95.06
PLN02756	418	S-methyl-5-thioribose kinase	95.01
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	94.91
KOG1826|consensus	2724		94.76
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	94.46
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.36
COG2334	331	Putative homoserine kinase type II (protein kinase	94.34
KOG1236|consensus	565		93.95
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	93.84
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.8
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	93.42
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.31
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	92.89

>KOG0595|consensus

Probab=100.00  E-value=1.5e-42  Score=278.71  Aligned_cols=165  Identities=24%  Similarity=0.287  Sum_probs=142.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|+++.++..||||.+.+....    ...++.+..||.+|+.++||||+  .+.++..  ....+|+|||||+
T Consensus        21 GsfavVykg~h~~~~~~VAIK~i~~~~l~----~k~~e~L~~Ei~iLkel~H~nIV--~l~d~~~--~~~~i~lVMEyC~   92 (429)
T KOG0595|consen   21 GSFAVVYKGRHKKSGTEVAIKCIAKKKLN----KKLVELLLSEIKILKELKHPNIV--RLLDCIE--DDDFIYLVMEYCN   92 (429)
T ss_pred             cceEEEEEeEeccCCceEEeeeehhhccC----HHHHHHHHHHHHHHHhcCCccee--eEEEEEe--cCCeEEEEEEeCC
Confidence            99999999999999999999998875332    33456779999999999999998  6666655  4457899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC--ccEEEeecCcceecCcc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP--YRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~--~~~kl~DFg~a~~~~~~-  209 (229)
                      ||+|..++..   .+.+++..++.++.|++.||++||+++||||||||.|||++.+....  -.+||+|||+|+.+.+. 
T Consensus        93 gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~  169 (429)
T KOG0595|consen   93 GGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS  169 (429)
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence            9999999887   45799999999999999999999999999999999999997753222  68999999999999876 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...+.||+|-|||||+++.
T Consensus       170 ~a~tlcGSplYMAPEV~~~  188 (429)
T KOG0595|consen  170 MAETLCGSPLYMAPEVIMS  188 (429)
T ss_pred             HHHHhhCCccccCHHHHHh
Confidence            4568899999999999853

>KOG0615|consensus

Probab=100.00  E-value=2.7e-41  Score=271.74  Aligned_cols=168  Identities=24%  Similarity=0.317  Sum_probs=139.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHH-hhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKR-MLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.|-+|..+.||+.||||++++........ ......+++|+++|++|+||||+  .+.++++..  ...|+||||+
T Consensus       183 Gafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV--~~~d~f~~~--ds~YmVlE~v  258 (475)
T KOG0615|consen  183 GAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIV--RIKDFFEVP--DSSYMVLEYV  258 (475)
T ss_pred             CceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEE--EEeeeeecC--CceEEEEEEe
Confidence            899999999999999999999998865544332 11223468999999999999998  556666533  4469999999


Q ss_pred             eCCCC-CccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc-c
Q psy11822        132 RRSQY-TGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-A  209 (229)
Q Consensus       132 ~~~~l-~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~-~  209 (229)
                      +||.| +....+    +.+.+...+.+++|++.||.|||+.||+||||||+|||+... ..+..+||+|||+|+.... .
T Consensus       259 ~GGeLfd~vv~n----k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~-~e~~llKItDFGlAK~~g~~s  333 (475)
T KOG0615|consen  259 EGGELFDKVVAN----KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND-AEDCLLKITDFGLAKVSGEGS  333 (475)
T ss_pred             cCccHHHHHHhc----cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC-CcceEEEecccchhhccccce
Confidence            99994 444443    568888889999999999999999999999999999999665 4568999999999998864 3


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.+.||||.|.|||++.+.
T Consensus       334 fm~TlCGTpsYvAPEVl~~k  353 (475)
T KOG0615|consen  334 FMKTLCGTPSYVAPEVLASK  353 (475)
T ss_pred             ehhhhcCCccccChhheecC
Confidence            67889999999999999763

>KOG0575|consensus

Probab=100.00  E-value=3.3e-40  Score=276.60  Aligned_cols=171  Identities=22%  Similarity=0.301  Sum_probs=149.9

Q ss_pred             ccceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccc
Q psy11822         44 ARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKA  123 (229)
Q Consensus        44 ~~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~  123 (229)
                      ..+..+.+.|+|+.||.+++..+|+.||+|++++...   .+..+.+.+.+||++.+.|.||||+  .++.++++.  ..
T Consensus        20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l---~k~~~reKv~~EIeIHr~L~HpnIV--~f~~~FEDs--~n   92 (592)
T KOG0575|consen   20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL---KKPKQREKVLNEIEIHRSLKHPNIV--QFYHFFEDS--NN   92 (592)
T ss_pred             eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh---cCcchHHHHHHHHHHHHhcCCCcEE--eeeeEeecC--Cc
Confidence            3344455559999999999999999999999998543   3455677889999999999999997  778787744  56


Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +|+|.|+|..+++..++..   .+.++|.+++.++.||+.||.|||+++|||||||.+|+|+    +.+.+|||+|||||
T Consensus        93 VYivLELC~~~sL~el~Kr---rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL----~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKR---RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL----NENMNVKIGDFGLA  165 (592)
T ss_pred             eEEEEEecCCccHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee----cCcCcEEeccccee
Confidence            8999999999998888775   4579999999999999999999999999999999999999    99999999999999


Q ss_pred             eecCcc--cccceeecccCCCCccccC
Q psy11822        204 SHVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+..+  +..+.||||-|.|||++..
T Consensus       166 t~le~~~Erk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  166 TQLEYDGERKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             eeecCcccccceecCCCcccChhHhcc
Confidence            998754  5578999999999999964

>KOG0600|consensus

Probab=100.00  E-value=3.4e-39  Score=265.25  Aligned_cols=164  Identities=22%  Similarity=0.247  Sum_probs=136.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..||+.||+|.+......    .....-..|||.+|++|.||||+.+.  +.........+|+|+|||+
T Consensus       128 GTyg~VYkAr~~~tgkivALKKvr~d~~~----~~~~~t~~REI~ILr~l~HpNIikL~--eivt~~~~~siYlVFeYMd  201 (560)
T KOG0600|consen  128 GTYGQVYKARDLETGKIVALKKVRFDNEK----EGFPITAIREIKILRRLDHPNIIKLE--EIVTSKLSGSIYLVFEYMD  201 (560)
T ss_pred             cchhheeEeeecccCcEEEEEEeecccCC----CcchHHHHHHHHHHHhcCCCccccee--eEEEecCCceEEEEEeccc
Confidence            99999999999999999999998764321    22333458999999999999998543  3333333457899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ..+...+...   .-.|++.++..++.|++.||.|||++||+|||||.+|||+    +.+|.+||+|||||+.+...   
T Consensus       202 hDL~GLl~~p---~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi----dn~G~LKiaDFGLAr~y~~~~~~  274 (560)
T KOG0600|consen  202 HDLSGLLSSP---GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI----DNNGVLKIADFGLARFYTPSGSA  274 (560)
T ss_pred             chhhhhhcCC---CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE----cCCCCEEeccccceeeccCCCCc
Confidence            8774444332   3469999999999999999999999999999999999999    99999999999999987654   


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .+++.+-|.||+|||+|+|.
T Consensus       275 ~~T~rVvTLWYRpPELLLG~  294 (560)
T KOG0600|consen  275 PYTSRVVTLWYRPPELLLGA  294 (560)
T ss_pred             ccccceEEeeccChHHhcCC
Confidence            46778999999999999984

>KOG0581|consensus

Probab=100.00  E-value=1.2e-39  Score=259.47  Aligned_cols=166  Identities=20%  Similarity=0.231  Sum_probs=141.2

Q ss_pred             ecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         49 FNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      ..+.|.-|.||+|.|+.|++.+|+|++.....     .....++.+|+++++.++||+|+.  .++.+..... .+.++|
T Consensus        86 ~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~-----~~~~~Qi~rEl~il~~~~spyIV~--~ygaF~~~~~-~isI~m  157 (364)
T KOG0581|consen   86 VLGSGNGGTVYKVRHKPTGKIYALKVILLNID-----PALQKQILRELEILRSCQSPYIVG--FYGAFYSNGE-EISICM  157 (364)
T ss_pred             hcccCCCcEEEEEEEcCCCeEEEEEeecccCC-----HHHHHHHHHHHHHHhhCCCCCeee--EeEEEEeCCc-eEEeeh
Confidence            33348899999999999999999999844221     223347799999999999999984  3444433332 589999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++|+|+.+...   .+++++....+++.+|++||.|||. .+||||||||+|||+    +..|+|||||||.|+.+.
T Consensus       158 EYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv----NskGeVKicDFGVS~~lv  230 (364)
T KOG0581|consen  158 EYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV----NSKGEVKICDFGVSGILV  230 (364)
T ss_pred             hhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee----ccCCCEEeccccccHHhh
Confidence            99999999999876   4679999999999999999999995 999999999999999    999999999999999998


Q ss_pred             cccccceeecccCCCCccccCC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....++.+||..|||||.+.|+
T Consensus       231 nS~a~tfvGT~~YMsPERi~g~  252 (364)
T KOG0581|consen  231 NSIANTFVGTSAYMSPERISGE  252 (364)
T ss_pred             hhhcccccccccccChhhhcCC
Confidence            8777899999999999999874

>KOG0593|consensus

Probab=100.00  E-value=2.1e-39  Score=252.12  Aligned_cols=162  Identities=24%  Similarity=0.294  Sum_probs=138.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|+++.||+.||||.+.....+...    .+-..|||+.|+++.|+|++  .+++.+.  ....+++|+|||+
T Consensus        13 GSYGvV~KCrnk~TgqIVAIKkF~Esedd~~V----kKIAlREIrmLKqLkH~NLV--nLiEVFr--rkrklhLVFE~~d   84 (396)
T KOG0593|consen   13 GSYGVVMKCRNKDTGQIVAIKKFVESEDDPVV----KKIALREIRMLKQLKHENLV--NLIEVFR--RKRKLHLVFEYCD   84 (396)
T ss_pred             CcceEEEEeccCCcccEEEEEeeccCCccHHH----HHHHHHHHHHHHhcccchHH--HHHHHHH--hcceeEEEeeecc
Confidence            89999999999999999999998764332222    22448999999999999997  6777665  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~~  210 (229)
                      ..-|..+...   ...++.+.+..+++|++.|+.|+|++++|||||||+|||+    ++++.+||||||+|+.+..  ..
T Consensus        85 hTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi----t~~gvvKLCDFGFAR~L~~pgd~  157 (396)
T KOG0593|consen   85 HTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI----TQNGVVKLCDFGFARTLSAPGDN  157 (396)
T ss_pred             hHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE----ecCCcEEeccchhhHhhcCCcch
Confidence            9987777554   4468888899999999999999999999999999999999    8888999999999999873  35


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ++.++.|.||+|||++.|+
T Consensus       158 YTDYVATRWYRaPELLvGD  176 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGD  176 (396)
T ss_pred             hhhhhhhhhccChhhhccc
Confidence            6789999999999999874

>KOG0598|consensus

Probab=100.00  E-value=1.2e-38  Score=253.78  Aligned_cols=168  Identities=21%  Similarity=0.239  Sum_probs=142.2

Q ss_pred             eecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         48 IFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        48 ~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      ...+.|+||.||.++...|++.||+|++++......   ...+...+|..+|..++||+|+  .++..+.  +...+|+|
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~---~e~~~~~~Er~IL~~v~hPFiv--~l~ysFQ--t~~kLylV  103 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK---KEVRHTKAERNILSKIKHPFIV--KLIYSFQ--TEEKLYLV  103 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh---hhHHHHHHHHHHHHhCCCCcEe--eeEEecc--cCCeEEEE
Confidence            334449999999999999999999999998765432   3455678999999999999998  4443343  45678999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +||+.||.|-..+.+   .+.+++..++.++.+|+.||.|||++|||||||||+|||+    +.+|+++|+|||+|+..-
T Consensus       104 ld~~~GGeLf~hL~~---eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL----d~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQR---EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL----DEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EeccCCccHHHHHHh---cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee----cCCCcEEEeccccchhcc
Confidence            999999997666665   5679999999999999999999999999999999999999    999999999999998653


Q ss_pred             c--ccccceeecccCCCCccccCC
Q psy11822        208 K--AVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~--~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .  ....+.|||+.|||||+++++
T Consensus       177 ~~~~~t~tfcGT~eYmAPEil~~~  200 (357)
T KOG0598|consen  177 KDGDATRTFCGTPEYMAPEILLGK  200 (357)
T ss_pred             cCCCccccccCCccccChHHHhcC
Confidence            3  355678999999999999764

>KOG0616|consensus

Probab=100.00  E-value=8.5e-38  Score=242.28  Aligned_cols=167  Identities=23%  Similarity=0.266  Sum_probs=145.5

Q ss_pred             eeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         47 YIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        47 ~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      ....+.|+||+|.+++++.+|..||+|++++...   .++.+.+...+|.++|+.+.||+++  .++..+.  +...+|+
T Consensus        49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v---VklKQveH~~nEk~vL~~v~~PFlv--~l~~t~~--d~~~lym  121 (355)
T KOG0616|consen   49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV---VKLKQVEHTHNEKRVLKAVSHPFLV--KLYGTFK--DNSNLYM  121 (355)
T ss_pred             eeeeccCccceEEEEEEccCCceeehhhcCHHHH---HHHHHHHHHhhHHHHHhhccCceeE--EEEEeec--cCCeEEE
Confidence            3344459999999999999999999999998544   4567788899999999999999997  4443333  4456899


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||++||.+-.++++   .++++++.++.++.||+.||+|||+++|++|||||+|||+    +++|.+||+|||.|+..
T Consensus       122 vmeyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl----D~~G~iKitDFGFAK~v  194 (355)
T KOG0616|consen  122 VMEYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL----DQNGHIKITDFGFAKRV  194 (355)
T ss_pred             EEeccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee----ccCCcEEEEeccceEEe
Confidence            9999999996666666   5789999999999999999999999999999999999999    99999999999999988


Q ss_pred             CcccccceeecccCCCCccccC
Q psy11822        207 SKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... ..+.||||.|+|||++.+
T Consensus       195 ~~r-T~TlCGTPeYLAPEii~s  215 (355)
T KOG0616|consen  195 SGR-TWTLCGTPEYLAPEIIQS  215 (355)
T ss_pred             cCc-EEEecCCccccChHHhhc
Confidence            775 688999999999999875

>KOG0661|consensus

Probab=100.00  E-value=8.4e-39  Score=261.33  Aligned_cols=168  Identities=28%  Similarity=0.430  Sum_probs=141.3

Q ss_pred             cceeeccc--CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccc
Q psy11822         45 RKYIFNCL--DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNV  121 (229)
Q Consensus        45 ~~~~~~~~--g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~  121 (229)
                      +|..++.+  |+||.||+|+...+|+.||||.+++.+....+.+.     .||+..|++++ ||||+  .+.+.+...+.
T Consensus        11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-----LREvksL~kln~hpnii--kL~Evi~d~~~   83 (538)
T KOG0661|consen   11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-----LREVKSLRKLNPHPNII--KLKEVIRDNDR   83 (538)
T ss_pred             HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-----HHHHHHHHhcCCCCcch--hhHHHhhccCc
Confidence            33344444  88999999999999999999999987665433221     78999999998 99998  45555554433


Q ss_pred             cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                       .+|+|||||+.+.++.+..+   ...|+++.++.|+.||++||+|+|++|+.|||+||+|||+    .....+||+|||
T Consensus        84 -~L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi----~~~~~iKiaDFG  155 (538)
T KOG0661|consen   84 -ILYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI----SGNDVIKIADFG  155 (538)
T ss_pred             -eEeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe----cccceeEecccc
Confidence             78999999999987766555   5579999999999999999999999999999999999999    666799999999


Q ss_pred             cceecCc-ccccceeecccCCCCcccc
Q psy11822        202 SASHVSK-AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       202 ~a~~~~~-~~~~~~~gt~~y~aPE~l~  227 (229)
                      +|+...+ +.++.++.|.||+|||+|+
T Consensus       156 LARev~SkpPYTeYVSTRWYRAPEvLL  182 (538)
T KOG0661|consen  156 LAREVRSKPPYTEYVSTRWYRAPEVLL  182 (538)
T ss_pred             cccccccCCCcchhhhcccccchHHhh
Confidence            9998865 4678899999999999986

>KOG0663|consensus

Probab=100.00  E-value=2.9e-38  Score=248.54  Aligned_cols=163  Identities=24%  Similarity=0.250  Sum_probs=134.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..|++.||+|.++.+...    .-..-...|||.+|.+++||||+.+.-+  ..+.+-..+|+|||||+
T Consensus        87 GtyGiVYRakdk~t~eIVALKr~kmekek----~GFPItsLREIniLl~~~H~NIV~vkEV--VvG~~~d~iy~VMe~~E  160 (419)
T KOG0663|consen   87 GTYGVVYRAKDKKTDEIVALKRLKMEKEK----EGFPITSLREINILLKARHPNIVEVKEV--VVGSNMDKIYIVMEYVE  160 (419)
T ss_pred             CcceeEEEeccCCcceeEEeeeccccccc----CCCcchhHHHHHHHHhcCCCCeeeeEEE--EeccccceeeeeHHHHH
Confidence            99999999999999999999998874211    1111133899999999999999854433  44555566999999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ...-..+..-   .++++..++..++.|+++||+|||.+.|+|||||++|+|+    +..|.+||+|||+|+.+.++  .
T Consensus       161 hDLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm----~~~G~lKiaDFGLAR~ygsp~k~  233 (419)
T KOG0663|consen  161 HDLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL----SHKGILKIADFGLAREYGSPLKP  233 (419)
T ss_pred             hhHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee----ccCCcEEecccchhhhhcCCccc
Confidence            8762222221   1469999999999999999999999999999999999999    88899999999999999876  5


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .+..+-|.||+|||+|+|
T Consensus       234 ~T~lVVTLWYRaPELLLG  251 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLG  251 (419)
T ss_pred             CcceEEEeeecCHHHhcC
Confidence            678899999999999987

>KOG0591|consensus

Probab=100.00  E-value=2.7e-38  Score=243.75  Aligned_cols=167  Identities=21%  Similarity=0.254  Sum_probs=138.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||++.+..+|..+|.|.++-...+.    ...+.+..|+.+|++|+||||+.....++..  +...++||||||+
T Consensus        30 GsFg~vykv~~~~~g~l~a~K~i~f~~md~----k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~--~~evlnivmE~c~  103 (375)
T KOG0591|consen   30 GSFGEVYKVQCLLDGKLVALKKIQFGMMDA----KARQDCVKEISLLKQLNHPNIVQYYAHSFIE--DNEVLNIVMELCD  103 (375)
T ss_pred             CcchheEEeeeccCcchhhhhhcchhhccH----HHHHHHHHHHHHHHhcCCchHHHHHHHhhhc--cchhhHHHHHhhc
Confidence            999999999999999999999988544332    2344678999999999999998433333333  2334799999999


Q ss_pred             CCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHH--CC--CccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        133 RSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQ--LG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       133 ~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~--~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      .|+|.+++.. ....+.+++..+++++.|++.||..||+  ..  |+||||||.|||+    +.+|.+||+|||+++.++
T Consensus       104 ~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl----~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  104 AGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL----TANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             ccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE----cCCCceeeccchhHhHhc
Confidence            9998877654 2335569999999999999999999998  34  9999999999999    888999999999999997


Q ss_pred             cc--cccceeecccCCCCccccCC
Q psy11822        208 KA--VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~~~  229 (229)
                      +.  ...+.+|||.||+||.+.++
T Consensus       180 s~~tfA~S~VGTPyYMSPE~i~~~  203 (375)
T KOG0591|consen  180 SKTTFAHSLVGTPYYMSPERIHES  203 (375)
T ss_pred             chhHHHHhhcCCCcccCHHHHhcC
Confidence            75  45679999999999998763

>KOG0659|consensus

Probab=100.00  E-value=5.8e-37  Score=234.46  Aligned_cols=163  Identities=23%  Similarity=0.266  Sum_probs=134.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.||+|++..||+.||||.++.....+.    ..-...|||+.|+.++|+||+  .+++.+..  ...+.+|+||+
T Consensus        12 EG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG----i~~talREIK~Lqel~h~nIi--~LiD~F~~--~~~l~lVfEfm   83 (318)
T KOG0659|consen   12 EGTYGVVYKARDTETGKRVAIKKIKLGNAKDG----INRTALREIKLLQELKHPNII--ELIDVFPH--KSNLSLVFEFM   83 (318)
T ss_pred             CcceEEEEEEEecCCCcEEEEEEeeccccccC----ccHHHHHHHHHHHHccCcchh--hhhhhccC--CCceEEEEEec
Confidence            39999999999999999999999887532211    112458999999999999997  67777653  34578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +...-..+..+   ...++..++..++.+++.||+|||++.|+||||||.|+|+    +.+|.+||+|||+|+.+.++. 
T Consensus        84 ~tdLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi----s~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   84 PTDLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI----SSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             cccHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE----cCCCcEEeecccchhccCCCCc
Confidence            98764444333   3468888999999999999999999999999999999999    888999999999999987652 


Q ss_pred             -ccceeecccCCCCccccCC
Q psy11822        211 -CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~~  229 (229)
                       ....+-|.||+|||+|.|.
T Consensus       157 ~~~~~V~TRWYRAPELLfGs  176 (318)
T KOG0659|consen  157 IQTHQVVTRWYRAPELLFGS  176 (318)
T ss_pred             ccccceeeeeccChHHhccc
Confidence             2334889999999999874

>KOG0583|consensus

Probab=100.00  E-value=4.9e-37  Score=255.14  Aligned_cols=165  Identities=23%  Similarity=0.285  Sum_probs=137.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.|+.|.+..+|+.||+|++.+....... ....+.+.+|+.+++.++ ||||+  ++.++....  ..+|+||||+
T Consensus        28 GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~~~~~~i~rEi~~~~~~~~HpnI~--~l~ev~~t~--~~~~ivmEy~  102 (370)
T KOG0583|consen   28 GSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-QKLDELIKREISILRRLRSHPNII--RLLEVFATP--TKIYIVMEYC  102 (370)
T ss_pred             CCCeeEEEeeeccCCCeEEEEEechhcccccc-cccchhhHHHHHHHHHhccCCCEe--EEEEEEecC--CeEEEEEEec
Confidence            89999999999999999999987774222111 123446679999999998 99997  555555543  3489999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcceecC--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVS--K  208 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~~~~--~  208 (229)
                      .+|.|...+..   .+++.+.+++.++.|+++|++|||++||+||||||+|||+    +.+ +.+||+|||+|....  .
T Consensus       103 ~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill----d~~~~~~Kl~DFG~s~~~~~~~  175 (370)
T KOG0583|consen  103 SGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL----DGNEGNLKLSDFGLSAISPGED  175 (370)
T ss_pred             CCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe----cCCCCCEEEeccccccccCCCC
Confidence            99886555555   4679999999999999999999999999999999999999    777 899999999999883  3


Q ss_pred             ccccceeecccCCCCccccCC
Q psy11822        209 AVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....+.+||+.|+|||++.+.
T Consensus       176 ~~l~t~cGsp~Y~aPEvl~~~  196 (370)
T KOG0583|consen  176 GLLKTFCGSPAYAAPEVLSGK  196 (370)
T ss_pred             CcccCCCCCcccCCHHHhCCC
Confidence            467889999999999999873

>KOG0585|consensus

Probab=100.00  E-value=3.8e-36  Score=245.81  Aligned_cols=167  Identities=22%  Similarity=0.306  Sum_probs=142.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHH--------HhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLK--------RMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--------~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |.||.|-+|.+..+++.||||++++.......        .....+.+++||.+|+++.|||||  .+++..++.....+
T Consensus       108 G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV--~LiEvLDDP~s~~~  185 (576)
T KOG0585|consen  108 GQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV--KLIEVLDDPESDKL  185 (576)
T ss_pred             CccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee--EEEEeecCcccCce
Confidence            89999999999999999999999875443211        112245789999999999999998  78888888888889


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      |+|+|||..|...+....   ...+++.+++.+++.++.||+|||.+|||||||||+|+|+    +.+|++||+|||.+.
T Consensus       186 YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl----~~~g~VKIsDFGVs~  258 (576)
T KOG0585|consen  186 YLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL----SSDGTVKISDFGVSN  258 (576)
T ss_pred             EEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE----cCCCcEEeeccceee
Confidence            999999999998877554   2239999999999999999999999999999999999999    888999999999998


Q ss_pred             ecCc-------ccccceeecccCCCCccccC
Q psy11822        205 HVSK-------AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~-------~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+.       ......+|||.|+|||++.+
T Consensus       259 ~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~  289 (576)
T KOG0585|consen  259 EFPQGSDEGSDDQLSRTVGTPAFFAPELCSG  289 (576)
T ss_pred             ecccCCccccHHHHhhcCCCccccchHhhcC
Confidence            7622       23456899999999999876

>KOG0611|consensus

Probab=100.00  E-value=1e-36  Score=245.51  Aligned_cols=162  Identities=24%  Similarity=0.331  Sum_probs=144.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.|-+|.+...|+.||||.+++..+.+   .+.+-.+.+||++|+.|+||||+  .+++.++  +...+.|||||..
T Consensus        64 GTYGKVk~A~e~~sgR~VAiKsIrKdkIkd---eqDlvhIRREIeIMSsLNHPhII--~IyEVFE--NkdKIvivMEYaS  136 (668)
T KOG0611|consen   64 GTYGKVKLAYEHKSGREVAIKSIRKDKIKD---EQDLVHIRREIEIMSSLNHPHII--QIYEVFE--NKDKIVIVMEYAS  136 (668)
T ss_pred             CcccceeehhhccCCcEeehhhhhhhhccc---HHHHHHHHHHHHHHhhcCCCcee--ehhhhhc--CCceEEEEEEecC
Confidence            899999999999999999999999865543   23344679999999999999997  6777765  5567899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|.|.+++..   .+.|++.+++.|++||++|+.|+|+++++|||||.+|||+    ++++.+||+|||++..+... ..
T Consensus       137 ~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL----D~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  137 GGELYDYISE---RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL----DQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             CccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee----cCCCCeeeeccchhhhhccccHH
Confidence            9998777776   5679999999999999999999999999999999999999    99999999999999988665 66


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      .+.||+|-|.+||+++|
T Consensus       210 qTFCGSPLYASPEIvNG  226 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNG  226 (668)
T ss_pred             HHhcCCcccCCccccCC
Confidence            88999999999999987

>KOG0192|consensus

Probab=100.00  E-value=1.8e-36  Score=250.06  Aligned_cols=164  Identities=18%  Similarity=0.148  Sum_probs=136.5

Q ss_pred             cccCCceeeeeeecCCCCcE-EEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccc-cccee
Q psy11822         50 NCLDDIGQVNVPTDLEGGEL-LAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVK-ASVQM  127 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~-vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~-~~~lv  127 (229)
                      .+.|+||+||+|.+.  |.. ||+|.+.....+...    .+.|.+|+.+|++++||||+  .+++...  +.. ...+|
T Consensus        49 iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~----~~~f~~E~~il~~l~HpNIV--~f~G~~~--~~~~~~~iV  118 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES----RKAFRREASLLSRLRHPNIV--QFYGACT--SPPGSLCIV  118 (362)
T ss_pred             cccCCceeEEEEEeC--CceeEEEEEecchhcChHH----HHHHHHHHHHHHhCCCCCee--eEEEEEc--CCCCceEEE
Confidence            344999999999987  666 999998875443322    56889999999999999998  4554443  333 57899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC-CccccCCCCCeeeeCCCCCCc-cEEEeecCccee
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG-LIHADLKPENIMLVDPVRQPY-RVKVIDFGSASH  205 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~-iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~  205 (229)
                      |||+++|+|..++... ....+++..+..++.+|++|+.|||+++ ||||||||+|||+    +..+ ++||+|||+++.
T Consensus       119 tEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv----~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV----DLKGKTLKIADFGLSRE  193 (362)
T ss_pred             EEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE----cCCCCEEEECCCcccee
Confidence            9999999988887653 2356999999999999999999999999 9999999999999    8886 999999999988


Q ss_pred             cCc--ccccceeecccCCCCccccC
Q psy11822        206 VSK--AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~--~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...  ...+...||+.|||||++++
T Consensus       194 ~~~~~~~~~~~~GT~~wMAPEv~~~  218 (362)
T KOG0192|consen  194 KVISKTSMTSVAGTYRWMAPEVLRG  218 (362)
T ss_pred             eccccccccCCCCCccccChhhhcC
Confidence            765  34455899999999999985

>KOG0580|consensus

Probab=100.00  E-value=3.9e-35  Score=221.41  Aligned_cols=164  Identities=23%  Similarity=0.285  Sum_probs=141.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||.|+...++-.||+|++.++..   .......++.+|+++.+.|+||||+  .++.++.  +...+|+++||..
T Consensus        33 gkFG~vYlarekks~~IvalKVlfKsqi---~~~~v~~qlrREiEIqs~L~hpnil--rlY~~fh--d~~riyLilEya~  105 (281)
T KOG0580|consen   33 GKFGNVYLAREKKSLFIVALKVLFKSQI---LKTQVEHQLRREIEIQSHLRHPNIL--RLYGYFH--DSKRIYLILEYAP  105 (281)
T ss_pred             CccccEeEeeeccCCcEEEEeeeeHHHH---HHhcchhhhhheeEeecccCCccHH--hhhhhee--ccceeEEEEEecC
Confidence            8899999999999999999999888653   3344556889999999999999997  6777776  4466899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|.+...+... ....+++..+..++.|++.||.|+|.++||||||||+|+|+    +..+.+||+|||.+...+.....
T Consensus       106 ~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl----g~~~~lkiAdfGwsV~~p~~kR~  180 (281)
T KOG0580|consen  106 RGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSNKRK  180 (281)
T ss_pred             CchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc----CCCCCeeccCCCceeecCCCCce
Confidence            99944333311 13469999999999999999999999999999999999999    77789999999999988877888


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      +.|||..|.|||+..|
T Consensus       181 tlcgt~dyl~pEmv~~  196 (281)
T KOG0580|consen  181 TLCGTLDYLPPEMVEG  196 (281)
T ss_pred             eeecccccCCHhhcCC
Confidence            9999999999999876

>KOG0592|consensus

Probab=100.00  E-value=1.9e-35  Score=245.04  Aligned_cols=163  Identities=22%  Similarity=0.260  Sum_probs=139.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.|++|++|++..+++.||||++.+..+..   ....+.+.+|-.+|.+| .||.|+  .++..+.  +...+|+|+||+
T Consensus        84 GSYStV~~A~~~~t~keYAiKVl~K~~Iik---e~KvkYV~~Ek~~l~~L~~hPgiv--kLy~TFQ--D~~sLYFvLe~A  156 (604)
T KOG0592|consen   84 GSYSTVVLAREKATGKEYAIKVLDKRYIIK---EKKVKYVTREKEALTQLSGHPGIV--KLYFTFQ--DEESLYFVLEYA  156 (604)
T ss_pred             ccceeEEEeeecCCCceeeHhhhhHHHHHh---hcccchhhHHHHHHHHhhCCCCeE--EEEEEee--cccceEEEEEec
Confidence            999999999999999999999999876643   33455678899999999 899997  4544444  445689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|.|..++.+   .+.|++..++.++.||+.||+|||++|||||||||+|||+    +.+++++|+|||.|+.+++.  
T Consensus       157 ~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL----d~dmhikITDFGsAK~l~~~~~  229 (604)
T KOG0592|consen  157 PNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL----DKDGHIKITDFGSAKILSPSQK  229 (604)
T ss_pred             CCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE----cCCCcEEEeeccccccCChhhc
Confidence            99997777777   4679999999999999999999999999999999999999    99999999999999988532  


Q ss_pred             -------------cccceeecccCCCCccccCC
Q psy11822        210 -------------VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 -------------~~~~~~gt~~y~aPE~l~~~  229 (229)
                                   ...+.+||..|.+||+|.++
T Consensus       230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~  262 (604)
T KOG0592|consen  230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDS  262 (604)
T ss_pred             cccCccCcccccCcccceeeeecccCHHHhcCC
Confidence                         11458999999999999763

>KOG0605|consensus

Probab=100.00  E-value=9.8e-35  Score=240.59  Aligned_cols=141  Identities=18%  Similarity=0.253  Sum_probs=122.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||+||+|+-+.||+.||+|++++...   .+..+++.+..|-.+|....+|+||  .++..+.  +...+||||||+
T Consensus       151 kGAfGeVrLarKk~Tg~iyAmK~LkKS~M---~~~~Qv~hV~aERdiL~~~ds~~vV--KLyYsFQ--D~~~LYLiMEyl  223 (550)
T KOG0605|consen  151 KGAFGEVRLARKKDTGEIYAMKILKKSEM---LKKNQVEHVRAERDILAEVDSPWVV--KLYYSFQ--DKEYLYLIMEYL  223 (550)
T ss_pred             cccceeEEEEEEccCCcEEeeecccHHHH---HhhhhHHHHHHHHHHhhhcCCCcEE--EEEEEec--CCCeeEEEEEec
Confidence            39999999999999999999999999654   3455677889999999999999997  4443343  456789999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +||++.-++..   .+.|++.+++.++.+++-||..+|+.|+|||||||+|+||    +..|++||+|||||..+
T Consensus       224 PGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi----D~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  224 PGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI----DAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             CCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee----cCCCCEeeccccccchh
Confidence            99997666666   5689999999999999999999999999999999999999    99999999999998543

>KOG0198|consensus

Probab=100.00  E-value=7.4e-35  Score=234.35  Aligned_cols=164  Identities=26%  Similarity=0.275  Sum_probs=134.5

Q ss_pred             cccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         50 NCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .+.|.||.||++.+..+|+.+|||.+......      ..+.+.+|+.+|++++||||+.  ..+.....+...++++||
T Consensus        25 lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~------~~~~l~~Ei~iL~~l~~p~IV~--~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   25 LGRGSFGSVYLATNKKTGELMAVKSVELEDSP------TSESLEREIRILSRLNHPNIVQ--YYGSSSSRENDEYNIFME   96 (313)
T ss_pred             ccCccceEEEEEEecCCCcceeeeeeecccch------hHHHHHHHHHHHHhCCCCCEEe--eCCccccccCeeeEeeee
Confidence            33499999999999999999999988764111      1456799999999999999984  332211111135789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~  208 (229)
                      |+++|++..++.....  .|++..++.+++||++||+|||++|||||||||+|||+    +. ++.+||+|||+++....
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl----~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL----DPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE----eCCCCeEEeccCcccccccc
Confidence            9999999888776332  69999999999999999999999999999999999999    77 68999999999988763


Q ss_pred             -----ccccceeecccCCCCcccc
Q psy11822        209 -----AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 -----~~~~~~~gt~~y~aPE~l~  227 (229)
                           .......||+.|||||++.
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~  194 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIR  194 (313)
T ss_pred             ccccccccccccCCccccCchhhc
Confidence                 2345689999999999997

>KOG0594|consensus

Probab=100.00  E-value=3.7e-35  Score=233.20  Aligned_cols=167  Identities=28%  Similarity=0.352  Sum_probs=132.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcc-ccceehhhhhhccc----cccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAF-VTLAHLVDYAHCNN----VKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-i~~~~~~~~~~~~~----~~~~~lv  127 (229)
                      |+||.||+|+...+|+.||+|.+..+...    .-......||+.+++.++|+| |+.  +.++....+    ...+++|
T Consensus        22 Gtyg~Vykar~~~~g~~VALKkirl~~~~----EG~P~taiREisllk~L~~~~~iv~--L~dv~~~~~~~~~~~~l~lv   95 (323)
T KOG0594|consen   22 GTYGVVYKARSKRTGKFVALKKIRLEFEE----EGVPSTAIREISLLKRLSHANHIVR--LHDVIHTSNNHRGIGKLYLV   95 (323)
T ss_pred             CCceEEEEEEEecCCCEEEEEEEeccccc----cCCCchhhHHHHHHHHhCCCcceEE--EEeeeeecccccccceEEEE
Confidence            89999999999999999999998765322    112334589999999999999 874  444454333    2367899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++...-..+.........++...++.+++|++.||+|||+++|+||||||.|||+    +..|.+||+|||+|+...
T Consensus        96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi----~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen   96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI----SSSGVLKLADFGLARAFS  171 (323)
T ss_pred             EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE----CCCCcEeeeccchHHHhc
Confidence            9999887633332221111356667789999999999999999999999999999999    888999999999999776


Q ss_pred             cc--cccceeecccCCCCccccCC
Q psy11822        208 KA--VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~~~  229 (229)
                      -+  .....++|.+|+|||+|.|+
T Consensus       172 ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  172 IPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             CCcccccccEEEeeccCHHHhcCC
Confidence            33  46788999999999999884

>KOG0694|consensus

Probab=100.00  E-value=1.7e-34  Score=245.10  Aligned_cols=164  Identities=20%  Similarity=0.185  Sum_probs=138.7

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.|++|....+++.||||++++..+-.   ...++..+.|.+++... +||+++  +++..+.  +...+|+|||
T Consensus       377 GkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~---~d~Ve~~~~EkrI~~la~~HPFL~--~L~~~fQ--T~~~l~fvme  449 (694)
T KOG0694|consen  377 GRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ---RDEVESLMCEKRIFELANRHPFLV--NLFSCFQ--TKEHLFFVME  449 (694)
T ss_pred             ccCcCceEEEEEEcCCCcEEEEEEeeccceec---cccHHHHHHHHHHHHHhccCCeEe--ecccccc--cCCeEEEEEE
Confidence            33999999999999999999999999854321   33455668888888777 599997  6665655  4467899999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC--
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--  207 (229)
                      |+.||++..+...    +.+++..++.++.+|+.||.|||++|||+||||.+|||+    +.+|++||+|||+++..-  
T Consensus       450 y~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL----D~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  450 YVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL----DTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             ecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE----cccCcEEecccccccccCCC
Confidence            9999995555443    579999999999999999999999999999999999999    999999999999998763  


Q ss_pred             cccccceeecccCCCCccccCC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....++.||||.|||||+|.++
T Consensus       522 g~~TsTfCGTpey~aPEil~e~  543 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQ  543 (694)
T ss_pred             CCccccccCChhhcChhhhccC
Confidence            3467899999999999999864

>KOG0658|consensus

Probab=100.00  E-value=1e-34  Score=230.97  Aligned_cols=164  Identities=24%  Similarity=0.261  Sum_probs=129.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc-ccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN-VKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~-~~~~~lv~e~  130 (229)
                      .|.||.||+|...++++.||||.+-+..          ..-.+|+.+|+.+.||||+.+..+.+....+ .-...+||||
T Consensus        34 ~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley  103 (364)
T KOG0658|consen   34 SGSFGVVYQAKLRETEEEVAIKKVLQDK----------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY  103 (364)
T ss_pred             ecccceEEEEEEcCCCceeEEEEecCCC----------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence            3999999999999999999999865421          1226899999999999998543332222222 2245679999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++......+..-......++...++-+++|+.+||+|||+.||+||||||.|+|+   +...|.+||||||.|+.+..+ 
T Consensus       104 mP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLv---D~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  104 MPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLV---DPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             chHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEE---cCCCCeEEeccCCcceeeccCC
Confidence            9998855543222224568889999999999999999999999999999999999   334589999999999999765 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...++..|..|+|||.+.|
T Consensus       181 pniSYicSRyYRaPELifg  199 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFG  199 (364)
T ss_pred             CceeEEEeccccCHHHHcC
Confidence            3357888999999999987

>KOG0597|consensus

Probab=100.00  E-value=1.1e-34  Score=241.71  Aligned_cols=162  Identities=18%  Similarity=0.212  Sum_probs=139.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||+||+|+.+.|.+.||+|.+.+....    ...+..+.+|+++++.++||||+  ..++.++  +...+|+|+||+
T Consensus        12 ~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~----~k~l~~l~~ev~i~r~lkHpniv--~m~esfE--t~~~~~vVte~a   83 (808)
T KOG0597|consen   12 EGSFGRVYKGRRKYTIQVVAIKFIDKSGRN----EKELKNLRQEVRILRSLKHPNIV--EMLESFE--TSAHLWVVTEYA   83 (808)
T ss_pred             CCccceeeecccccceeEEEEEEehhcCCc----hHHHHHHHHHHHHHHhcCCcchh--hHHHhhc--ccceEEEEehhh
Confidence            399999999999999999999998875332    33455679999999999999997  5666665  456789999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      .| +|..++..   .+.++++.+..++.++++||.|||+++|+|||+||.|||+    ..++.+|+||||+|+.+...  
T Consensus        84 ~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl----~~~~~~KlcdFg~Ar~m~~~t~  155 (808)
T KOG0597|consen   84 VG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL----EKGGTLKLCDFGLARAMSTNTS  155 (808)
T ss_pred             hh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee----cCCCceeechhhhhhhcccCce
Confidence            99 65555565   4679999999999999999999999999999999999999    88899999999999988654  


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ..+...|||.|||||++.++
T Consensus       156 vltsikGtPlYmAPElv~e~  175 (808)
T KOG0597|consen  156 VLTSIKGTPLYMAPELVEEQ  175 (808)
T ss_pred             eeeeccCcccccCHHHHcCC
Confidence            45678999999999998764

>KOG0660|consensus

Probab=100.00  E-value=2.1e-34  Score=228.79  Aligned_cols=163  Identities=25%  Similarity=0.355  Sum_probs=135.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh---cccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH---CNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~---~~~~~~~~lv~  128 (229)
                      .|.||.|..|.+..||+.||||.+...+...    -...+..||+++|+.++|+||+.  +.+.+.   ..+...+|+|+
T Consensus        32 ~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~----~~akRtlRElklLr~~~HeNIi~--l~di~~p~~~~~f~DvYiV~  105 (359)
T KOG0660|consen   32 RGAYGVVCSAKDKRTGEKVAIKKILNPFENQ----IDAKRTLRELKLLRHLRHENIIG--LLDIFRPPSRDKFNDVYLVF  105 (359)
T ss_pred             CcceeeEEEEEEcCCCCEeehhhhhhhhhch----HHHHHHHHHHHHHHHhcCCCcce--EEeecccccccccceeEEeh
Confidence            4999999999999999999999988765443    23346699999999999999983  333332   23456789999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC-
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~-  207 (229)
                      |+|+ .+|.+++..   .+.|+..-+..+++|++.||+|+|+.+|+||||||+|+|+    +.+..+||+|||+|+..+ 
T Consensus       106 elMe-tDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~----n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen  106 ELME-TDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL----NADCDLKICDFGLARYLDK  177 (359)
T ss_pred             hHHh-hHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhcccccccccchhheee----ccCCCEEeccccceeeccc
Confidence            9994 345555555   3448888899999999999999999999999999999999    999999999999999986 


Q ss_pred             ---cccccceeecccCCCCccccC
Q psy11822        208 ---KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ---~~~~~~~~gt~~y~aPE~l~~  228 (229)
                         ...++.++-|.||+|||++.+
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhc
Confidence               446678999999999999864

>KOG4250|consensus

Probab=100.00  E-value=5.2e-34  Score=242.89  Aligned_cols=169  Identities=24%  Similarity=0.294  Sum_probs=145.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----cccccee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----VKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----~~~~~lv  127 (229)
                      .|+||.||+++++.||+.||||.+++..     .....+...+|+++|++++|+|||  ..++..+...    ...-.+|
T Consensus        23 ~Ga~g~V~rgrnketG~~vAvK~~~~~~-----~~r~~e~~~~EieilkKLnh~NIV--k~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   23 KGAFGNVYRGRNKETGRLVAVKTFNKES-----SLRPRERWCREIEILKKLNHPNIV--KLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             CCccceeeeecccccccchhHHhhhhhc-----ccchHHHHHHHHHHHHHcCchhhh--hhcccCCccccCcccccceEE
Confidence            4999999999999999999999988753     244556678999999999999998  4444444333    2334789


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||||.+|+|...+....+...|++.+.+.++..++.||.|||.+||+||||||+||++....++.-..||+|||.|+.++
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            99999999988888888888999999999999999999999999999999999999998766666789999999999998


Q ss_pred             cc-cccceeecccCCCCcccc
Q psy11822        208 KA-VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~-~~~~~~gt~~y~aPE~l~  227 (229)
                      .+ ...+.+||+.|.+||+..
T Consensus       176 d~s~~~S~vGT~~YLhPel~E  196 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYE  196 (732)
T ss_pred             CCCeeeeecCchhhcChHHHh
Confidence            76 557899999999999874

>KOG0588|consensus

Probab=99.98  E-value=1.5e-33  Score=238.44  Aligned_cols=163  Identities=25%  Similarity=0.275  Sum_probs=139.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+-|.|-+|++..||+..|||++.+...   ....+...+.+||-+|+.++|||++  ++++.++  +...+|+|.||+
T Consensus        22 ~Gstg~vrlakh~~TGqlaaiKii~k~~~---~s~s~~~~IerEIviMkLi~HpnVl--~LydVwe--~~~~lylvlEyv   94 (786)
T KOG0588|consen   22 KGSTGCVRLAKHAETGQLAAIKIIPKRSE---LSSSQPAGIEREIVIMKLIEHPNVL--RLYDVWE--NKQHLYLVLEYV   94 (786)
T ss_pred             CCCCceehhhhcccccceeEEEeeccccc---cccccccchhhhhHHHHHhcCCCee--eeeeeec--cCceEEEEEEec
Confidence            48899999999999999999999887421   1122345679999999999999997  6666665  456789999999


Q ss_pred             eCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++|. |+.+..+    +++++.++.++++||+.|+.|||..+|+||||||+|+|+    +..+.+||+|||.|..-.++ 
T Consensus        95 ~gGELFdylv~k----G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL----d~~~nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen   95 PGGELFDYLVRK----GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL----DVKNNIKIADFGMASLEVPGK  166 (786)
T ss_pred             CCchhHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh----hcccCEeeeccceeecccCCc
Confidence            9999 5555444    789999999999999999999999999999999999999    88888999999999876554 


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ...+.||.|.|+|||+++|.
T Consensus       167 lLeTSCGSPHYA~PEIV~G~  186 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGR  186 (786)
T ss_pred             cccccCCCcccCCchhhcCC
Confidence            56789999999999999884

>KOG0582|consensus

Probab=99.97  E-value=8.6e-33  Score=224.74  Aligned_cols=161  Identities=22%  Similarity=0.246  Sum_probs=133.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.-++||+|+...+++.||||++..+..+     ..++.+.+|+..|+.++||||+..+..    ......+|+||.||.
T Consensus        37 G~sa~V~~A~c~p~~e~VAIK~inLEkc~-----~~ld~l~kE~~~msl~~HPNIv~~~~s----Fvv~~~LWvVmpfMa  107 (516)
T KOG0582|consen   37 GASAVVYLARCIPTNEVVAIKIINLEKCN-----NDLDALRKEVQTMSLIDHPNIVTYHCS----FVVDSELWVVMPFMA  107 (516)
T ss_pred             cceeEeeeeeecccCCEEEEEEeehhhhh-----hhHHHHHHHHHHhhhcCCCCcceEEEE----EEecceeEEeehhhc
Confidence            66689999999999999999998875432     235678999999999999999854422    223346899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|++..++....+. .+.+..+..|+++++.||.|||++|.||||||++|||+    +.+|.|||+|||.+-.+...   
T Consensus       108 ~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi----~~dG~VkLadFgvsa~l~~~G~R  182 (516)
T KOG0582|consen  108 GGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI----DSDGTVKLADFGVSASLFDSGDR  182 (516)
T ss_pred             CCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE----cCCCcEEEcCceeeeeecccCce
Confidence            99977776665544 48888899999999999999999999999999999999    99999999999977655321   


Q ss_pred             ---cccceeecccCCCCcccc
Q psy11822        210 ---VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~  227 (229)
                         +..+.+||++|||||+++
T Consensus       183 ~~~rf~tfvgtp~wmAPEvl~  203 (516)
T KOG0582|consen  183 QVTRFNTFVGTPCWMAPEVLM  203 (516)
T ss_pred             eeEeeccccCcccccChHHhh
Confidence               115679999999999964

>KOG0032|consensus

Probab=99.97  E-value=4.6e-33  Score=231.55  Aligned_cols=175  Identities=24%  Similarity=0.307  Sum_probs=142.3

Q ss_pred             cccceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhc
Q psy11822         43 EARKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHC  118 (229)
Q Consensus        43 ~~~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~  118 (229)
                      ...+|.+...   |.||.||+|++..||+.+|+|++++.....   ....+.+.+|+.+|+.+. ||||+  .+.+.++.
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~---~~~~~~v~~Ev~il~~l~~hpniv--~l~~~~e~  107 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG---KEDREDVRREVAILQQLSGHPNIV--QLKDAFED  107 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc---cccHHHHHHHHHHHHhccCCCCEE--EEEEEEEc
Confidence            3344554422   899999999999999999999998753321   113457799999999998 99998  56666654


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                      .  ..+++|||++.||.|-..+...    .+++..+..++.|++.|++|||+.||+||||||+|+|+.......+.+|++
T Consensus       108 ~--~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~  181 (382)
T KOG0032|consen  108 P--DSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLI  181 (382)
T ss_pred             C--CeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEe
Confidence            3  4689999999999944443332    399999999999999999999999999999999999998765556799999


Q ss_pred             ecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||+|...... .....+||+.|+|||++.+
T Consensus       182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~  212 (382)
T KOG0032|consen  182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGG  212 (382)
T ss_pred             eCCCceEccCCceEeeecCCccccCchhhcC
Confidence            99999988764 5678999999999999874

>KOG4236|consensus

Probab=99.97  E-value=2e-33  Score=232.86  Aligned_cols=166  Identities=21%  Similarity=0.218  Sum_probs=139.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||-|+++.+|+.||||++.+....    ..+.+++.+|+.+|..+.||.|+  ++...++  +...+++|||-+.
T Consensus       575 GQFG~VYgg~hRktGrdVAvKvIdKlrFp----~kqesqlR~EVaILq~l~HPGiV--~le~M~E--T~ervFVVMEKl~  646 (888)
T KOG4236|consen  575 GQFGTVYGGKHRKTGRDVAVKVIDKLRFP----TKQESQLRNEVAILQNLHHPGIV--NLECMFE--TPERVFVVMEKLH  646 (888)
T ss_pred             CcceeeecceecccCceeeeeeeecccCC----CchHHHHHHHHHHHHhcCCCCee--EEEEeec--CCceEEEEehhhc
Confidence            88999999999999999999999875433    22335779999999999999998  4433333  5567899999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      |.-|.-++..  +.++|++.....++.||+.||+|||.++|+|+||||+|||+... +.-.++||||||.|+++... ..
T Consensus       647 GDMLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~-~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  647 GDMLEMILSS--EKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA-SPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             chHHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC-CCCCceeeccccceeecchhhhh
Confidence            8777666554  34679988889999999999999999999999999999999765 44569999999999998654 56


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.+|||.|+|||+|+++
T Consensus       724 rsVVGTPAYLaPEVLrnk  741 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRNK  741 (888)
T ss_pred             hhhcCCccccCHHHHhhc
Confidence            789999999999999763

>KOG1187|consensus

Probab=99.97  E-value=5.8e-33  Score=230.25  Aligned_cols=162  Identities=19%  Similarity=0.152  Sum_probs=130.5

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|... +|..||||.+......     . ..+|.+|+.++.+++|||++  .+++|+...+. ..++|+||
T Consensus        84 g~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~-----~-~~eF~~Ei~~ls~l~H~Nlv--~LlGyC~e~~~-~~~LVYEy  153 (361)
T KOG1187|consen   84 GEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQ-----G-EREFLNEVEILSRLRHPNLV--KLLGYCLEGGE-HRLLVYEY  153 (361)
T ss_pred             ecCCCeEEEEEEEC-CCCEEEEEEecCCCCc-----c-hhHHHHHHHHHhcCCCcCcc--cEEEEEecCCc-eEEEEEEc
Confidence            34889999999965 4599999977653211     0 33589999999999999998  56777553322 47999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC---CccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG---LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~---iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +++|+|...+...... .++|....+|+.++|+||+|||...   ||||||||+|||+    ++++..||+|||+|+..+
T Consensus       154 m~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL----D~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  154 MPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL----DEDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             cCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE----CCCCCEEccCccCcccCC
Confidence            9999987776664433 7899999999999999999999844   9999999999999    999999999999997665


Q ss_pred             c-ccc-cce-eecccCCCCcccc
Q psy11822        208 K-AVC-NTY-LQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~-~~~-~~~-~gt~~y~aPE~l~  227 (229)
                      . ... ... .||.+|+|||++.
T Consensus       229 ~~~~~~~~~~~gt~gY~~PEy~~  251 (361)
T KOG1187|consen  229 EGDTSVSTTVMGTFGYLAPEYAS  251 (361)
T ss_pred             ccccceeeecCCCCccCChhhhc
Confidence            4 321 222 8999999999885

>KOG0578|consensus

Probab=99.97  E-value=1.1e-32  Score=229.78  Aligned_cols=157  Identities=22%  Similarity=0.295  Sum_probs=134.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.=|.||.|....+++.||||.+...      .+...+.+.+|+.+|+..+|+||+  ..++.+-..  ..+|+||||++
T Consensus       284 gaSG~vy~A~~~~~~~~VaiK~m~l~------~Q~~keLilnEi~Vm~~~~H~NiV--nfl~Sylv~--deLWVVMEym~  353 (550)
T KOG0578|consen  284 GATGGVYVARKISTKQEVAIKRMDLR------KQPKKELLLNEILVMRDLHHPNIV--NFLDSYLVG--DELWVVMEYME  353 (550)
T ss_pred             ccccceeeeeeccCCceEEEEEEEec------cCCchhhhHHHHHHHHhccchHHH--HHHHHhccc--ceeEEEEeecC
Confidence            67799999999999999999998763      233455679999999999999998  333333222  45899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|.+....    ..+++.++..|++++++||+|||.+||+|||||.+|||+    +.++.+||+|||++..+...  .
T Consensus       354 ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL----~~~g~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  354 GGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL----TMDGSVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             CCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe----ccCCcEEEeeeeeeeccccccCc
Confidence            9998888776    459999999999999999999999999999999999999    77889999999999888653  5


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      ..+.+|||+|||||++.
T Consensus       426 R~TmVGTPYWMAPEVvt  442 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVT  442 (550)
T ss_pred             cccccCCCCccchhhhh
Confidence            67899999999999874

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=1.3e-32  Score=226.58  Aligned_cols=163  Identities=21%  Similarity=0.207  Sum_probs=131.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|++++.....   ......+.+|+.+++.++||||+.  +.+.+.  .....++||||+
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~--~~~~~~--~~~~~~lv~e~~   77 (323)
T cd05571           5 KGTFGKVILVREKATGKYYAMKILKKEVIIA---KDEVAHTLTESRVLQNTRHPFLTA--LKYSFQ--THDRLCFVMEYA   77 (323)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hHHHHHHHHHHHHHHhCCCCCCCC--EEEEEE--cCCEEEEEEeCC
Confidence            4999999999999999999999988753321   222345678999999999999974  333333  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      +++++...+..   ...+++..+..++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+++....  .
T Consensus        78 ~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DfG~a~~~~~~~~  150 (323)
T cd05571          78 NGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML----DKDGHIKITDFGLCKEGISDGA  150 (323)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEeeCCCCcccccCCC
Confidence            99997665544   3468888899999999999999999999999999999999    7888999999999876432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05571         151 TMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             cccceecCccccChhhhcC
Confidence            3345789999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=1.1e-32  Score=230.38  Aligned_cols=163  Identities=20%  Similarity=0.241  Sum_probs=131.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|++++.....   ......+.+|+.++..++|+||+.  +++.+.  +....|+||||+
T Consensus        11 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~E~~il~~~~~~~iv~--~~~~~~--~~~~~~lv~E~~   83 (363)
T cd05628          11 RGAFGEVRLVQKKDTGHVYAMKILRKADMLE---KEQVGHIRAERDILVEADSLWVVK--MFYSFQ--DKLNLYLIMEFL   83 (363)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---hhHHHHHHHHHHHHHhCCCCCcce--EEEEEe--cCCeEEEEEcCC
Confidence            3999999999999999999999987643221   223446688999999999999974  443333  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|++..++..   ...+++.+++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++.....  
T Consensus        84 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi----~~~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          84 PGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL----DSKGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCCEEEeeccCccccccccc
Confidence            99997766654   3468899999999999999999999999999999999999    77889999999998754321  


Q ss_pred             -----------------------------------cccceeecccCCCCccccC
Q psy11822        210 -----------------------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----------------------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                                                         .....+||+.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  210 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ  210 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC
Confidence                                               0124589999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=1.8e-32  Score=226.24  Aligned_cols=161  Identities=24%  Similarity=0.267  Sum_probs=133.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++.....   .....+.+.+|+.+++.++||||+.  +++.+.  .....++||||++
T Consensus        29 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~--~~~~~~--~~~~~~lv~e~~~  101 (329)
T PTZ00263         29 GSFGRVRIAKHKGTGEYYAIKCLKKREIL---KMKQVQHVAQEKSILMELSHPFIVN--MMCSFQ--DENRVYFLLEFVV  101 (329)
T ss_pred             cCCeEEEEEEECCCCCEEEEEEEEHHHHh---hhhhHHHHHHHHHHHHhCCCCCCCc--EEEEEE--cCCEEEEEEcCCC
Confidence            99999999999999999999998764322   2233456789999999999999974  444443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++...+..   ...+++..+..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++...... .
T Consensus       102 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~-~  173 (329)
T PTZ00263        102 GGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL----DNKGHVKVTDFGFAKKVPDRT-F  173 (329)
T ss_pred             CChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----CCCCCEEEeeccCceEcCCCc-c
Confidence            9997666554   3457888888999999999999999999999999999999    888899999999998775533 3


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ..+||+.|+|||++.+
T Consensus       174 ~~~gt~~y~aPE~~~~  189 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQS  189 (329)
T ss_pred             eecCChhhcCHHHHcC
Confidence            5689999999999865

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2e-32  Score=222.29  Aligned_cols=162  Identities=21%  Similarity=0.216  Sum_probs=132.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|++.......   ....+.+.+|+.+++.++||||+  .+++++.  +....++||||+
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~   83 (291)
T cd05612          11 TGTFGRVHLVRDRISEHYYALKVMAIPEVIR---LKQEQHVHNEKRVLKEVSHPFII--RLFWTEH--DQRFLYMLMEYV   83 (291)
T ss_pred             cCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---hHHHHHHHHHHHHHHhCCCCcHh--hhHhhhc--cCCeEEEEEeCC
Confidence            3899999999999999999999987643221   22344668899999999999997  4444443  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++++|..++..   ...+++..+..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++...... 
T Consensus        84 ~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli----~~~~~~kl~Dfg~~~~~~~~~-  155 (291)
T cd05612          84 PGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL----DKEGHIKLTDFGFAKKLRDRT-  155 (291)
T ss_pred             CCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEEecCcchhccCCc-
Confidence            99997666554   3458888889999999999999999999999999999999    778899999999998765432 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       156 ~~~~gt~~y~aPE~~~~  172 (291)
T cd05612         156 WTLCGTPEYLAPEVIQS  172 (291)
T ss_pred             ccccCChhhcCHHHHcC
Confidence            35679999999999865

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-32  Score=223.61  Aligned_cols=163  Identities=22%  Similarity=0.220  Sum_probs=132.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|++++.....   ......+.+|+.+++.++||||+.  +.+.+.  .....++||||+
T Consensus         3 ~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~e~~   75 (312)
T cd05585           3 KGSFGKVMQVRKRDTQRIYALKTIRKAHIVS---RSEVTHTLAERTVLAQVNCPFIVP--LKFSFQ--SPEKLYLVLAFI   75 (312)
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhCCCCcEec--eeeEEe--cCCeEEEEEcCC
Confidence            4899999999999999999999987643221   223345678999999999999974  443333  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....  .
T Consensus        76 ~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  148 (312)
T cd05585          76 NGGELFHHLQR---EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL----DYQGHIALCDFGLCKLNMKDDD  148 (312)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE----CCCCcEEEEECcccccCccCCC
Confidence            99997666554   3458888899999999999999999999999999999999    8888999999999986432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       149 ~~~~~~gt~~y~aPE~~~~  167 (312)
T cd05585         149 KTNTFCGTPEYLAPELLLG  167 (312)
T ss_pred             ccccccCCcccCCHHHHcC
Confidence            3345689999999999865

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.6e-32  Score=224.82  Aligned_cols=161  Identities=22%  Similarity=0.292  Sum_probs=133.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++......   ......+.+|+.+++.++||||+.  +++++.  .....|+||||++
T Consensus        12 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~--~~~~~~--~~~~~~lv~e~~~   84 (333)
T cd05600          12 GGYGQVFLAKKKDTGEIVALKRMKKSLLFK---LNEVRHVLTERDILTTTKSEWLVK--LLYAFQ--DDEYLYLAMEYVP   84 (333)
T ss_pred             cCCeEEEEEEECCCCCEEEEEEEEHHHHhh---hhHHHHHHHHHHHHHhCCCCCCcc--EEEEEE--cCCEEEEEEeCCC
Confidence            899999999999999999999988753321   223446688999999999999974  444433  3446799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +++|..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +..+.+||+|||++..... ...
T Consensus        85 g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kL~Dfg~a~~~~~-~~~  156 (333)
T cd05600          85 GGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI----DASGHIKLTDFGLSKGIVT-YAN  156 (333)
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEEEeCcCCccccc-ccC
Confidence            9998777654   3458888889999999999999999999999999999999    7888999999999986654 335


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...||+.|+|||++.+
T Consensus       157 ~~~gt~~y~aPE~~~~  172 (333)
T cd05600         157 SVVGSPDYMAPEVLRG  172 (333)
T ss_pred             CcccCccccChhHhcC
Confidence            6789999999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.3e-32  Score=228.63  Aligned_cols=140  Identities=17%  Similarity=0.221  Sum_probs=116.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|++.+....   .....+.+.+|+++++.++||||+  .+++.+.  +...+|+||||+
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~E~~il~~l~hp~iv--~~~~~~~--~~~~~~lv~E~~   83 (377)
T cd05629          11 KGAFGEVRLVQKKDTGKIYAMKTLLKSEMF---KKDQLAHVKAERDVLAESDSPWVV--SLYYSFQ--DAQYLYLIMEFL   83 (377)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHHH---HhHHHHHHHHHHHHHHhCCCCCcc--eEEEEEE--cCCeeEEEEeCC
Confidence            389999999999999999999998764322   122345678899999999999997  4444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ++|+|..++..   ...+++..++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++.
T Consensus        84 ~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll----~~~~~~kl~DfGla~~  150 (377)
T cd05629          84 PGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI----DRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEEeecccccc
Confidence            99997766554   3458888889999999999999999999999999999999    7788999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0577|consensus

Probab=99.97  E-value=4.7e-33  Score=233.18  Aligned_cols=159  Identities=25%  Similarity=0.262  Sum_probs=128.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||-||-|++..+.+.||||.+.-.-   .+.......+..|++.|++++|||++-+.-+.    -.....|+|||||-
T Consensus        37 GSFGAVYfArd~~n~evVAIKKMsySG---KQs~EKWqDIlKEVrFL~~l~HPntieYkgCy----Lre~TaWLVMEYCl  109 (948)
T KOG0577|consen   37 GSFGAVYFARDVRNSEVVAIKKMSYSG---KQSNEKWQDILKEVRFLRQLRHPNTIEYKGCY----LREHTAWLVMEYCL  109 (948)
T ss_pred             CccceeEEeeccCccceeeeeeccccc---cccHHHHHHHHHHHHHHHhccCCCccccccee----eccchHHHHHHHHh
Confidence            999999999999999999999876432   12233344678999999999999986433221    12345799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      |+--+.+--.   .+++-+.++..|+.+.++||+|||+.+.||||||.+|||+    +..|.|||+|||.|....+.  +
T Consensus       110 GSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL----se~g~VKLaDFGSAsi~~PA--n  180 (948)
T KOG0577|consen  110 GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL----SEPGLVKLADFGSASIMAPA--N  180 (948)
T ss_pred             ccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe----cCCCeeeeccccchhhcCch--h
Confidence            8763322111   1368888999999999999999999999999999999999    77789999999999877664  6


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      +++|||.|||||+++
T Consensus       181 sFvGTPywMAPEVIL  195 (948)
T KOG0577|consen  181 SFVGTPYWMAPEVIL  195 (948)
T ss_pred             cccCCccccchhHhe
Confidence            799999999999985

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=4.9e-32  Score=223.66  Aligned_cols=163  Identities=20%  Similarity=0.190  Sum_probs=131.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|++.+.....   ......+.+|+.+++.++||||+.+  ...+.  .....++||||+
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~--~~~~~--~~~~~~lv~Ey~   77 (328)
T cd05593           5 KGTFGKVILVREKASGKYYAMKILKKEVIIA---KDEVAHTLTESRVLKNTRHPFLTSL--KYSFQ--TKDRLCFVMEYV   77 (328)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhCCCCCCcce--EEEEE--cCCEEEEEEeCC
Confidence            4899999999999999999999988653321   2223456889999999999999743  33332  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      +++++...+..   ...+++.++..++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+++....  .
T Consensus        78 ~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll----~~~~~~kL~DfG~~~~~~~~~~  150 (328)
T cd05593          78 NGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML----DKDGHIKITDFGLCKEGITDAA  150 (328)
T ss_pred             CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE----CCCCcEEEecCcCCccCCCccc
Confidence            99997655544   3458888899999999999999999999999999999999    7888999999999876432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       151 ~~~~~~gt~~y~aPE~~~~  169 (328)
T cd05593         151 TMKTFCGTPEYLAPEVLED  169 (328)
T ss_pred             ccccccCCcCccChhhhcC
Confidence            3345689999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=3.4e-32  Score=228.00  Aligned_cols=161  Identities=20%  Similarity=0.216  Sum_probs=131.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++.+.....   ......+.+|+.+++.++||||+  .+++.+.  +...+|+||||++
T Consensus        54 G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~i~~~~~hp~iv--~~~~~~~--~~~~~~lv~Ey~~  126 (370)
T cd05621          54 GAFGEVQLVRHKSSQKVYAMKLLSKFEMIK---RSDSAFFWEERDIMAFANSPWVV--QLFCAFQ--DDKYLYMVMEYMP  126 (370)
T ss_pred             cCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhhHHHHHHHHHHHHhCCCCCEe--eEEEEEE--cCCEEEEEEcCCC
Confidence            999999999999999999999987632211   11233467899999999999997  4444443  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..    ..+++.++..++.|++.||+|||+++|+||||||+|||+    +..+.+||+|||+|......   
T Consensus       127 gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl----~~~~~~kL~DFG~a~~~~~~~~~  198 (370)
T cd05621         127 GGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL----DKHGHLKLADFGTCMKMDETGMV  198 (370)
T ss_pred             CCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEEecccceecccCCce
Confidence            9998777654    357888889999999999999999999999999999999    78889999999999877543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       199 ~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         199 RCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             ecccCCCCcccCCHHHHhc
Confidence            2245689999999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4e-32  Score=227.07  Aligned_cols=141  Identities=18%  Similarity=0.216  Sum_probs=116.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+|+.||||++.......   ......+.+|+.+++.++||||+.  +++.+.  +....++||||+
T Consensus        11 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~il~~l~h~~iv~--~~~~~~--~~~~~~lv~E~~   83 (364)
T cd05599          11 RGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE---KEQVAHVRAERDILAEADNPWVVK--LYYSFQ--DENYLYLIMEYL   83 (364)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhCCCCCCcc--eEEEEE--cCCeEEEEECCC
Confidence            3999999999999999999999987643221   223345688999999999999974  444433  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ++|+|..++..   ...+++..++.++.|++.||+|||++||+||||||+|||+    +.++.++|+|||++..+
T Consensus        84 ~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          84 PGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL----DAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEeecccceec
Confidence            99997766554   3458889999999999999999999999999999999999    88889999999998765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=7.2e-32  Score=226.97  Aligned_cols=139  Identities=17%  Similarity=0.217  Sum_probs=115.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++......   .......+.+|+.+++.+.|+||+.  +++.+.  +....|+||||++
T Consensus        12 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~---~~~~~~~~~~E~~il~~~~h~~iv~--~~~~~~--~~~~~~lv~E~~~   84 (382)
T cd05625          12 GAFGEVCLARKVDTKALYAMKTLRKKDVL---LRNQVAHVKAERDILAEADNEWVVR--LYYSFQ--DKDNLYFVMDYIP   84 (382)
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEeHHHhh---hHHHHHHHHHHHHHHHhCCCCcCCe--EEEEEE--eCCEEEEEEeCCC
Confidence            99999999999999999999998764321   1233456788999999999999974  444433  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +|+|..++..   ...+++..++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||++..
T Consensus        85 gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl----~~~g~~kL~DFGla~~  150 (382)
T cd05625          85 GGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEeECCCCcc
Confidence            9997666554   2457888889999999999999999999999999999999    8888999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0033|consensus

Probab=99.97  E-value=2.3e-33  Score=212.90  Aligned_cols=165  Identities=21%  Similarity=0.259  Sum_probs=135.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.|+.|+++.+..||+.+|+|++.......    ...+.+.+|+++-+.|+||||+.  +.+...  +....|+|+|++
T Consensus        21 kG~FSvVrRc~~~~tg~~fa~kiin~~k~~~----~~~e~l~rEarIC~~LqHP~Ivr--L~~ti~--~~~~~ylvFe~m   92 (355)
T KOG0033|consen   21 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSA----RDFQKLEREARICRKLQHPNIVR--LHDSIQ--EESFHYLVFDLV   92 (355)
T ss_pred             cCchHHHHHHHhccchHHHHHHHhhhhhhcc----ccHHHHHHHHHHHHhcCCCcEee--hhhhhc--ccceeEEEEecc
Confidence            3899999999999999999999987654332    23456799999999999999984  444433  445679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      .|+.+-.-+-.   ...+++..+...++||++||+|+|.++|||||+||+|+++.+. +..-.+||+|||+|..+.+. .
T Consensus        93 ~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK-~~~A~vKL~~FGvAi~l~~g~~  168 (355)
T KOG0033|consen   93 TGGELFEDIVA---REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK-AKGAAVKLADFGLAIEVNDGEA  168 (355)
T ss_pred             cchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec-cCCCceeecccceEEEeCCccc
Confidence            99994333332   1468888899999999999999999999999999999999887 44569999999999999865 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+|||.|||||+++.
T Consensus       169 ~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             cccccCCCcccCHHHhhc
Confidence            457899999999999864

>KOG0201|consensus

Probab=99.97  E-value=7.1e-32  Score=218.94  Aligned_cols=162  Identities=20%  Similarity=0.205  Sum_probs=135.3

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|.||.||+|.+..+++.||+|++..+..     ....+.+++|+.+|..++++||...+    ...-....+|++|||
T Consensus        22 grGsfG~Vyk~~d~~t~k~vAiKii~Le~~-----~deIediqqei~~Ls~~~~~~it~yy----gsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   22 GRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-----EDEIEDIQQEISVLSQCDSPNITEYY----GSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccceeeeeeeccccceEEEEEechhhc-----chhhHHHHHHHHHHHhcCcchHHhhh----hheeecccHHHHHHH
Confidence            349999999999999999999999987533     33455678999999999999986322    222233458999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      |.||+...++..   ...+.+.++.-++++++.||.|||..+.+|||||+.|||+    ...|.+||+|||.+..+... 
T Consensus        93 ~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~----s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   93 CGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL----SESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             hcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE----eccCcEEEEecceeeeeechh
Confidence            999996666665   3445888899999999999999999999999999999999    77789999999999888654 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ...+.+|||.|||||++.+
T Consensus       166 ~rr~tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             hccccccccccccchhhhcc
Confidence             4478999999999999975

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=9e-32  Score=225.91  Aligned_cols=138  Identities=17%  Similarity=0.214  Sum_probs=114.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++......   .......+.+|+.+++.+.|+||+.  +++.+.  +...+++||||++
T Consensus        12 G~~g~V~~a~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~E~~il~~l~h~~iv~--~~~~~~--~~~~~~lv~E~~~   84 (376)
T cd05598          12 GAFGEVCLVRKVDTNALYAMKTLRKADVL---MRNQAAHVKAERDILAEADNEWVVK--LYYSFQ--DKDNLYFVMDYIP   84 (376)
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEcHHHHH---hhhhHHHHHHHHHHHHhCCCCCcce--EEEEEE--cCCEEEEEEeCCC
Confidence            99999999999999999999998764321   1223446688999999999999974  333333  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      +|+|..++..   ...+++..+..++.||+.||+|||++||+||||||+|||+    +..+.+||+|||+|.
T Consensus        85 ~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~ikL~DFG~a~  149 (376)
T cd05598          85 GGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCT  149 (376)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE----CCCCCEEEEeCCCCc
Confidence            9998777655   3457888888999999999999999999999999999999    778899999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=7e-32  Score=223.73  Aligned_cols=161  Identities=22%  Similarity=0.224  Sum_probs=130.6

Q ss_pred             CCceeeeeeecCCCC-cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGG-ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..++ ..||+|.+......   .....+.+.+|+.+++.++||||+  .+++++.  +....++||||+
T Consensus        41 G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~Iv--~~~~~~~--~~~~~~lv~Ey~  113 (340)
T PTZ00426         41 GSFGRVILATYKNEDFPPVAIKRFEKSKII---KQKQVDHVFSERKILNYINHPFCV--NLYGSFK--DESYLYLVLEFV  113 (340)
T ss_pred             cCCeEEEEEEEECCCCeEEEEEEEEHHHhh---hhhhHHHHHHHHHHHHhCCCCCCc--ceEEEEE--eCCEEEEEEeCC
Confidence            999999999876554 78999998764322   122344678899999999999998  4444443  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++|+|..++..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... .
T Consensus       114 ~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~ikL~DFG~a~~~~~~-~  185 (340)
T PTZ00426        114 IGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL----DKDGFIKMTDFGFAKVVDTR-T  185 (340)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEecCCCCeecCCC-c
Confidence            99997766654   3458888889999999999999999999999999999999    78889999999999876543 2


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       186 ~~~~gt~~y~aPE~~~~  202 (340)
T PTZ00426        186 YTLCGTPEYIAPEILLN  202 (340)
T ss_pred             ceecCChhhcCHHHHhC
Confidence            45789999999999864

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=6.3e-32  Score=222.55  Aligned_cols=164  Identities=20%  Similarity=0.202  Sum_probs=131.3

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+|..||+|+++......   ......+.+|+.+++.++||||+.  +.+.+.  .....++||||
T Consensus         4 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~i~~--~~~~~~--~~~~~~lv~E~   76 (323)
T cd05595           4 GKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFLTA--LKYAFQ--THDRLCFVMEY   76 (323)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hHHHHHHHHHHHHHHhCCCCCCcc--eeeEEe--cCCEEEEEEeC
Confidence            34999999999999999999999988753321   222345578999999999999974  333333  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++......   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... 
T Consensus        77 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~~  149 (323)
T cd05595          77 ANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----cCCCCEEecccHHhccccCCC
Confidence            999997655544   3458888899999999999999999999999999999999    77889999999998764322 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       150 ~~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05595         150 ATMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             CccccccCCcCcCCcccccC
Confidence             2345689999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0610|consensus

Probab=99.97  E-value=3.1e-31  Score=213.92  Aligned_cols=141  Identities=24%  Similarity=0.266  Sum_probs=120.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+.|+||+|....++..+|+|++.++....   .....+++.|-++|+.+.||++..  ++..++  ++...+++||||+
T Consensus        88 GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~---rkKl~Ra~tE~eIL~~lDHPFlPT--LYa~fe--t~~~~cl~meyCp  160 (459)
T KOG0610|consen   88 GDIGTVYLVELRGTNCLFAMKVMDKESLAS---RKKLKRAQTEREILSLLDHPFLPT--LYASFE--TDKYSCLVMEYCP  160 (459)
T ss_pred             CCceeEEEEEecCCCceEEEEEecHHHHhh---hhHHHHHHHHHHHHHhcCCCccch--hhheee--ccceeEEEEecCC
Confidence            899999999999999999999999976654   333446688888999999999964  443343  5567899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ||+|..+.+++. .+.+++..++.++.+|+-||+|||-.|||.|||||+|||+    .++|++-|+||.|+..
T Consensus       161 GGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv----redGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  161 GGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV----REDGHIMLSDFDLSLR  228 (459)
T ss_pred             CccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE----ecCCcEEeeecccccc
Confidence            999877755544 4579999999999999999999999999999999999999    8889999999999743

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=1.3e-31  Score=220.72  Aligned_cols=164  Identities=21%  Similarity=0.195  Sum_probs=130.5

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+|+.||+|+++......   ......+.+|+++++.++||||+.+  ...+.  .....++||||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~---~~~~~~~~~e~~~l~~~~hp~i~~~--~~~~~--~~~~~~lv~E~   76 (325)
T cd05594           4 GKGTFGKVILVKEKATGRYYAMKILKKEVIVA---KDEVAHTLTENRVLQNSRHPFLTAL--KYSFQ--THDRLCFVMEY   76 (325)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhCCCCCCCce--EEEEE--cCCEEEEEEeC
Confidence            34999999999999999999999998754322   1223355788999999999999743  33332  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~-  208 (229)
                      ++++++...+..   ...+++.++..++.|++.||.|||+ +||+||||||+|||+    +.++.+||+|||+++.... 
T Consensus        77 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll----~~~~~~kL~Dfg~~~~~~~~  149 (325)
T cd05594          77 ANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGIKD  149 (325)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE----CCCCCEEEecCCCCeecCCC
Confidence            999997655544   3458888899999999999999997 799999999999999    8888999999999876432 


Q ss_pred             -ccccceeecccCCCCccccC
Q psy11822        209 -AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 -~~~~~~~gt~~y~aPE~l~~  228 (229)
                       .......||+.|+|||++.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05594         150 GATMKTFCGTPEYLAPEVLED  170 (325)
T ss_pred             CcccccccCCcccCCHHHHcc
Confidence             23345679999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=7.6e-32  Score=226.78  Aligned_cols=140  Identities=17%  Similarity=0.220  Sum_probs=115.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|+++......   ......+.+|+.+++.++||||+.  +++.+.  +...+++||||+
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~E~~il~~l~h~~iv~--l~~~~~--~~~~~~lv~E~~   83 (381)
T cd05626          11 IGAFGEVCLACKVDTHALYAMKTLRKKDVLN---RNQVAHVKAERDILAEADNEWVVK--LYYSFQ--DKDNLYFVMDYI   83 (381)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hHHHHHHHHHHHHHHhcCCCCeee--eEEEEe--cCCEEEEEEecC
Confidence            3999999999999999999999987643221   223446789999999999999974  444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ++|+|..++..   ...+++..++.++.|++.||+|||+.||+||||||+|||+    +..+.+||+|||++..
T Consensus        84 ~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili----~~~~~~kL~DFGl~~~  150 (381)
T cd05626          84 PGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI----DLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE----CCCCCEEEeeCcCCcc
Confidence            99997766554   3457888889999999999999999999999999999999    7788999999999754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0586|consensus

Probab=99.97  E-value=1.1e-31  Score=225.78  Aligned_cols=162  Identities=20%  Similarity=0.281  Sum_probs=139.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.|+.|.+|++..|+..||||.+++...+...    +..+.+|+++|+.++||||+  +++.+.+  ....+|+||||+.
T Consensus        67 g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~----~~k~~rev~imk~l~HPnIv--kl~~v~~--t~~~lylV~eya~  138 (596)
T KOG0586|consen   67 GNFAKVKLARHILTGTEVAIKIIDKTQLNPSK----RQKLGREVDIMKSLNHPNIV--KLFSVIE--TEATLYLVMEYAS  138 (596)
T ss_pred             ceeEEEEeeEecCCCceEEEEEehhcccChHH----HHHHHHHHHHHHhcCCccee--eeeeeee--ecceeEEEEEecc
Confidence            88999999999999999999999987665322    22468999999999999997  5555544  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|.+..++.+   .+.+.+.++..++.|+++|++|||+++|+|||||++|||+    +++..+||+|||++..+... ..
T Consensus       139 ~ge~~~yl~~---~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL----~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  139 GGELFDYLVK---HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL----DENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             CchhHHHHHh---cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc----ccccceeeeccccceeecccccc
Confidence            9996666666   4567788999999999999999999999999999999999    88889999999999998765 55


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.||++.|.|||++.|.
T Consensus       212 qt~cgsppyAaPEl~~g~  229 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGK  229 (596)
T ss_pred             cccCCCCCccChHhhcCc
Confidence            789999999999999873

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=1.4e-31  Score=223.59  Aligned_cols=164  Identities=20%  Similarity=0.259  Sum_probs=131.3

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+++.||+|+++.....   .......+.+|+.++..++||||+.  .++.+.  +...+|+||||
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~--~~~~~~--~~~~~~lv~E~   82 (360)
T cd05627          10 GRGAFGEVRLVQKKDTGHIYAMKILRKADML---EKEQVAHIRAERDILVEADGAWVVK--MFYSFQ--DKRNLYLIMEF   82 (360)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHHh---hhhhHHHHHHHHHHHHhCCCCCEee--EEEEEE--cCCEEEEEEeC
Confidence            3499999999999999999999998764322   1233456788999999999999973  443333  34568999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++|+|..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.++|+|||++..+... 
T Consensus        83 ~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli----~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          83 LPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL----DAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             CCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----CCCCCEEEeeccCCccccccc
Confidence            999997776554   3468888899999999999999999999999999999999    77889999999998754211 


Q ss_pred             ------------------------------------cccceeecccCCCCccccC
Q psy11822        210 ------------------------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ------------------------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                                                          .....+||+.|+|||++.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  210 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ  210 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC
Confidence                                                0123579999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-31  Score=222.28  Aligned_cols=162  Identities=22%  Similarity=0.302  Sum_probs=133.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.....   .......+.+|+.++..++||||+  .+++.+.  +....++||||++
T Consensus        12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~lv~e~~~   84 (350)
T cd05573          12 GAFGEVWLVRDKDTGQVYAMKVLRKSDMI---KRNQIAHVRAERDILADADSPWIV--KLYYSFQ--DEEHLYLVMEYMP   84 (350)
T ss_pred             CCcEEEEEEEECCCCCEEEEEEEEHHHHh---hccHHHHHHHHHHHHHhcCCCCcc--chhhhee--cCCeEEEEEcCCC
Confidence            99999999999999999999998875322   123344678899999999999997  4444443  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +++|..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++.......  
T Consensus        85 ~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          85 GGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI----DADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEeecCCCCccCcccCcc
Confidence            9997776655   2468888999999999999999999999999999999999    888899999999998764322  


Q ss_pred             -----------------------------ccceeecccCCCCccccC
Q psy11822        211 -----------------------------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -----------------------------~~~~~gt~~y~aPE~l~~  228 (229)
                                                   .....||+.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG  204 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence                                         234679999999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=2.1e-31  Score=219.43  Aligned_cols=162  Identities=20%  Similarity=0.193  Sum_probs=127.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc---ccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT---PGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~---~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+++.||+|++++.......   ..+.+.+|++   .++.++||||+.  +++++.  .....|+||
T Consensus         9 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~l~~e~~~~~~~~~l~hp~i~~--~~~~~~--~~~~~~lv~   81 (324)
T cd05589           9 RGHFGKVLLAEYKKTGELYAIKALKKGDIIARD---EVESLMCEKRIFETANSERHPFLVN--LFACFQ--TEDHVCFVM   81 (324)
T ss_pred             ecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhh---HHHHHHHHHHHHHhccccCCCChhc--eeeEEE--cCCEEEEEE
Confidence            399999999999999999999999875432211   2233445544   456778999974  444443  345679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..    ..+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++....
T Consensus        82 E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill----~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          82 EYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL----DTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             cCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE----CCCCcEEeCcccCCccCCC
Confidence            99999997666543    358888999999999999999999999999999999999    8888999999999875432


Q ss_pred             --ccccceeecccCCCCccccC
Q psy11822        209 --AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 --~~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......+|++.|+|||++.+
T Consensus       154 ~~~~~~~~~g~~~y~aPE~~~~  175 (324)
T cd05589         154 FGDRTSTFCGTPEFLAPEVLTE  175 (324)
T ss_pred             CCCcccccccCccccCHhHhcC
Confidence              23345789999999999865

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0599|consensus

Probab=99.97  E-value=1.3e-32  Score=211.90  Aligned_cols=164  Identities=20%  Similarity=0.210  Sum_probs=134.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHH--HHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDL--LKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |.-+.|-+|.+..||..+|+|++....-..  ......++.-.+|+.+|+++ .||+|+  .+.+.++  ++..+++|+|
T Consensus        28 gvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II--~l~D~ye--s~sF~FlVFd  103 (411)
T KOG0599|consen   28 GVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYII--DLQDVYE--SDAFVFLVFD  103 (411)
T ss_pred             cchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEE--Eeeeecc--Ccchhhhhhh
Confidence            556778999999999999999876421110  11223345668899999988 899997  5555555  4456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      .|+.|.|-+++..   ...+++.++++|++|+.+|+.|||.++|+||||||+|||+    +.+.++||+|||.|..+.++
T Consensus       104 l~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl----ddn~~i~isDFGFa~~l~~G  176 (411)
T KOG0599|consen  104 LMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL----DDNMNIKISDFGFACQLEPG  176 (411)
T ss_pred             hcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee----ccccceEEeccceeeccCCc
Confidence            9999995555454   3579999999999999999999999999999999999999    88999999999999999876


Q ss_pred             -cccceeecccCCCCcccc
Q psy11822        210 -VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~  227 (229)
                       .....||||+|+|||.+.
T Consensus       177 ekLrelCGTPgYLAPEtik  195 (411)
T KOG0599|consen  177 EKLRELCGTPGYLAPETIK  195 (411)
T ss_pred             hhHHHhcCCCcccChhhee
Confidence             567899999999999874

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=1.6e-31  Score=223.90  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=130.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++++.....   ......+.+|+.+++.++||||+.  +.+.+.  +....++||||++
T Consensus        54 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~il~~~~h~~iv~--~~~~~~--~~~~~~lv~Ey~~  126 (370)
T cd05596          54 GAFGEVQLVRHKSSKQVYAMKLLSKFEMIK---RSDSAFFWEERDIMAHANSEWIVQ--LHYAFQ--DDKYLYMVMEYMP  126 (370)
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEHHHhhh---hhhHHHHHHHHHHHHhCCCCCcce--EEEEEe--cCCEEEEEEcCCC
Confidence            999999999999999999999987643211   122334678999999999999974  333333  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..    ..+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......   
T Consensus       127 gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----~~~~~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         127 GGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             CCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----cCCCCEEEEeccceeeccCCCcc
Confidence            9998777654    347788888999999999999999999999999999999    88889999999999876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       199 ~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             cCCCCCCCcCeECHHHhcc
Confidence            2245689999999998854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=2e-31  Score=223.39  Aligned_cols=161  Identities=19%  Similarity=0.210  Sum_probs=130.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++.+.....   ......+.+|+.+++.++||||+.  +++.+.  +....++||||++
T Consensus        54 G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~e~~i~~~~~hp~iv~--~~~~~~--~~~~~~lv~Ey~~  126 (371)
T cd05622          54 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIK---RSDSAFFWEERDIMAFANSPWVVQ--LFYAFQ--DDRYLYMVMEYMP  126 (371)
T ss_pred             cCCeEEEEEEECCCCcEEEEEEEEHHHhhh---hHHHHHHHHHHHHHHhCCCCCCCe--EEEEEE--cCCEEEEEEcCCC
Confidence            999999999999999999999987633211   112334678899999999999974  443333  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..+...    ..+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....   
T Consensus       127 gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll----~~~~~ikL~DfG~a~~~~~~~~~  198 (371)
T cd05622         127 GGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGMV  198 (371)
T ss_pred             CCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE----CCCCCEEEEeCCceeEcCcCCcc
Confidence            9998777654    347788888999999999999999999999999999999    77889999999999877542   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       199 ~~~~~~gt~~y~aPE~l~~  217 (371)
T cd05622         199 RCDTAVGTPDYISPEVLKS  217 (371)
T ss_pred             cccCcccCccccCHHHHhc
Confidence            2245689999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=1.6e-31  Score=220.70  Aligned_cols=164  Identities=20%  Similarity=0.201  Sum_probs=131.7

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.||+|++..+++.||+|++++.....   ....+.+.+|+.++..+ +||||+.  +++.+.  +....|+|||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~e~~il~~~~~hp~Iv~--~~~~~~--~~~~~~lv~e   76 (329)
T cd05588           4 GRGSYAKVLLVELKKTRRIYAMKVIKKELVND---DEDIDWVQTEKHVFETASNHPFLVG--LHSCFQ--TESRLFFVIE   76 (329)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhccCCCCCCc--eEEEEE--cCCEEEEEEe
Confidence            34899999999999999999999998754322   22334567888888888 7999974  444433  3456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC--
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--  207 (229)
                      |+++|+|..+...   ...+++..+..++.|++.||.|||++||+||||||+||++    +..+.+||+|||+++...  
T Consensus        77 ~~~~g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~~~~  149 (329)
T cd05588          77 FVSGGDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMCKEGIRP  149 (329)
T ss_pred             CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEECcCccccccccC
Confidence            9999997655443   3468999999999999999999999999999999999999    778899999999987532  


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .......+||+.|+|||++.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05588         150 GDTTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             CCccccccCCccccCHHHHcC
Confidence            223345789999999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=3.7e-31  Score=214.19  Aligned_cols=166  Identities=18%  Similarity=0.140  Sum_probs=130.9

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+|+.||+|.+.......   ......+.+|+.+++.++|+|++.  +.+.+.  .....++||||
T Consensus         9 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~iv~--~~~~~~--~~~~~~lv~e~   81 (285)
T cd05631           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKK---RKGEAMALNEKRILEKVNSRFVVS--LAYAYE--TKDALCLVLTI   81 (285)
T ss_pred             ecCCCEEEEEEEEecCCceEEEEEeeHhhhhh---hhhHHHHHHHHHHHHhcCCCcEEE--EEEEEc--cCCeEEEEEEe
Confidence            34999999999999999999999987643221   112234578999999999999973  333333  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++|++...+.... ...+++..+..++.|++.||.|||+++|+||||||+|||+    +.++.++|+|||++...... 
T Consensus        82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill----~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          82 MNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL----DDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             cCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeCCCcEEcCCCC
Confidence            99999765543211 2357888889999999999999999999999999999999    77789999999999876543 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       157 ~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631         157 TVRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             eecCCCCCCCccCHhhhcC
Confidence            2345679999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=5e-31  Score=212.94  Aligned_cols=166  Identities=19%  Similarity=0.191  Sum_probs=130.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||+||+|.+..+++.||+|.+.......   ....+.+..|+++++.++|+||+.  +...+.  .....++||||+
T Consensus         3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~   75 (280)
T cd05608           3 KGGFGEVSACQMRATGKLYACKKLNKKRLKK---RKGYEGAMVEKRILAKVHSRFIVS--LAYAFQ--TKTDLCLVMTIM   75 (280)
T ss_pred             CCCceeEEEEEEccCCcEEEEEeeeHHHHhh---hHHHHHHHHHHHHHHhCCCCcEee--eeEEEc--CCCeEEEEEeCC
Confidence            4899999999999999999999987643321   222345678999999999999974  333332  334579999999


Q ss_pred             eCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++|+|...+.. ......+++..++.++.|++.||.|||+++|+||||||+||++    +.++.++|+|||++...... 
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~~~  151 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL----DNDGNVRISDLGLAVELKDGQ  151 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCccceecCCCC
Confidence            99997654322 1123468888899999999999999999999999999999999    77789999999999876543 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       152 ~~~~~~~g~~~y~aPE~~~~  171 (280)
T cd05608         152 SKTKGYAGTPGFMAPELLQG  171 (280)
T ss_pred             ccccccCCCcCccCHHHhcC
Confidence             2234678999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=2.6e-31  Score=216.89  Aligned_cols=160  Identities=24%  Similarity=0.275  Sum_probs=126.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++....     ......+.+|+.+++.++||||+.  +.+++.  +....++||||+.
T Consensus        16 G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~--~~~~~~--~~~~~~lv~e~~~   86 (303)
T cd07869          16 GSYATVYKGKSKVNGKLVALKVIRLQEE-----EGTPFTAIREASLLKGLKHANIVL--LHDIIH--TKETLTLVFEYVH   86 (303)
T ss_pred             cCCEEEEEEEECCCCCEEEEEEeccccc-----cccchhHHHHHHHHhhCCCCCcCe--EEEEEe--cCCeEEEEEECCC
Confidence            8999999999999999999999865321     112224578999999999999974  444443  3346799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++.+..+...   ...+++..+..++.|++.||+|||++||+||||||+|||+    +..+.+||+|||++......  .
T Consensus        87 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~  159 (303)
T cd07869          87 TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI----SDTGELKLADFGLARAKSVPSHT  159 (303)
T ss_pred             cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECCCCcceeccCCCcc
Confidence            7655444332   2357888889999999999999999999999999999999    77889999999999765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~  177 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLG  177 (303)
T ss_pred             CCCCcccCCCCChHHHcC
Confidence            345678999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=3.9e-31  Score=217.16  Aligned_cols=163  Identities=20%  Similarity=0.209  Sum_probs=127.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc-ccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA-LNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|++..+++.||+|+++......   ....+.+..|..++.. ..||||+.  +++.+.  .....++||||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~hp~i~~--~~~~~~--~~~~~~lv~e~   77 (316)
T cd05592           5 KGSFGKVMLAELKGTNEFFAIKALKKDVVLE---DDDVECTMVERRVLALAWEHPFLTH--LFCTFQ--TKEHLFFVMEY   77 (316)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhhHHHHHHHHHHHHhccCCCCccc--eeeEEE--cCCEEEEEEcC
Confidence            4999999999999999999999988653221   1122233455556654 48999974  444433  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      +++|+|...+..   ...+++..+..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||+++....  
T Consensus        78 ~~gg~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592          78 LNGGDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL----DKDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE----CCCCCEEEccCcCCeECCCCC
Confidence            999997666544   3458888889999999999999999999999999999999    7788999999999986532  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05592         151 GKASTFCGTPDYIAPEILKG  170 (316)
T ss_pred             CccccccCCccccCHHHHcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=4.9e-31  Score=217.19  Aligned_cols=163  Identities=20%  Similarity=0.212  Sum_probs=126.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc-ccccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT-PGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+|+.||+|++.+.......   ....+.+|.. +++.++||||+.  +.+.+.  +....++||||
T Consensus         5 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~~~~~l~hp~iv~--~~~~~~--~~~~~~lv~e~   77 (323)
T cd05575           5 KGSFGKVLLAKHKADGKFYAVKVLQKKAILKKK---EQKHIMAERNVLLKNVKHPFLVG--LHYSFQ--TADKLYFVLDY   77 (323)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh---HHHHHHHHHHHHHhhCCCCCCCC--eeEEEE--eCCEEEEEEcC
Confidence            499999999999999999999998764332111   1223344444 457789999974  333333  34467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      ++++++...+..   ...+++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....  
T Consensus        78 ~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll----~~~~~~kl~Dfg~~~~~~~~~  150 (323)
T cd05575          78 VNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEGIEHS  150 (323)
T ss_pred             CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeccCCCcccccCC
Confidence            999997665544   3458888889999999999999999999999999999999    7888999999999876432  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (323)
T cd05575         151 KTTSTFCGTPEYLAPEVLRK  170 (323)
T ss_pred             CccccccCChhhcChhhhcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=4e-31  Score=217.47  Aligned_cols=163  Identities=22%  Similarity=0.222  Sum_probs=129.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|++..+++.||+|++++.....   ....+.+.+|+.++..+ +||||+  .+++.+.  .....|+||||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~h~~iv--~~~~~~~--~~~~~~iv~Ey   77 (320)
T cd05590           5 KGSFGKVMLARLKESGRLYAVKVLKKDVILQ---DDDVECTMTEKRILSLARNHPFLT--QLYCCFQ--TPDRLFFVMEF   77 (320)
T ss_pred             eCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---ccHHHHHHHHHHHHHhccCCCchh--ceeeEEE--cCCEEEEEEcC
Confidence            4999999999999999999999987643221   22233456777777765 799997  3444443  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      +++|+|...+..   ...+++..+..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++....  
T Consensus        78 ~~~g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli----~~~~~~kL~DfG~~~~~~~~~  150 (320)
T cd05590          78 VNGGDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGIFNG  150 (320)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE----CCCCcEEEeeCCCCeecCcCC
Confidence            999997665544   3458888899999999999999999999999999999999    8888999999999876432  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .......||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (320)
T cd05590         151 KTTSTFCGTPDYIAPEILQE  170 (320)
T ss_pred             CcccccccCccccCHHHHcC
Confidence            23345689999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0589|consensus

Probab=99.97  E-value=6.4e-32  Score=223.11  Aligned_cols=165  Identities=19%  Similarity=0.176  Sum_probs=136.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.++++++...+..||+|.+.........    .+.+.+|+.+++++.||||+-  ..+.+.. +...++|||+||
T Consensus        14 ~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~----r~~A~~E~~lis~~~hP~iv~--y~ds~~~-~~~~l~Ivm~Y~   86 (426)
T KOG0589|consen   14 RGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE----RRSAIQEMDLLSKLLHPNIVE--YKDSFEE-DGQLLCIVMEYC   86 (426)
T ss_pred             ccccchhhhhhhccCCceEEEEEEeccccCchh----hHHHHHHHHHHHhccCCCeee--eccchhc-CCceEEEEEeec
Confidence            499999999999999999999998765433222    225589999999999999973  3333332 223379999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +||++.+.+.... ...++++.++.++.|++.|+.|||+++|+|||||+.|||+    +.+..|||.|||+|+.+.+.  
T Consensus        87 eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl----tk~~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   87 EGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL----TKDKKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             CCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc----cccCceeecchhhhhhcCCchh
Confidence            9999777766533 3468889999999999999999999999999999999999    77779999999999999776  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...+.+|||.||+||++.|
T Consensus       162 ~a~tvvGTp~YmcPEil~d  180 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSD  180 (426)
T ss_pred             hhheecCCCcccCHHHhCC
Confidence            5678999999999999976

>KOG0197|consensus

Probab=99.96  E-value=2.5e-31  Score=220.58  Aligned_cols=158  Identities=18%  Similarity=0.185  Sum_probs=127.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||.|.+. ...+||+|.++..       ....+.|.+|+.+|++|+|+||+.+.  ..  +.....+||||||++
T Consensus       217 G~FG~V~~g~~~-~~~~vavk~ik~~-------~m~~~~f~~Ea~iMk~L~H~~lV~l~--gV--~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  217 GQFGEVWLGKWN-GSTKVAVKTIKEG-------SMSPEAFLREAQIMKKLRHEKLVKLY--GV--CTKQEPIYIVTEYMP  284 (468)
T ss_pred             CccceEEEEEEc-CCCcccceEEecc-------ccChhHHHHHHHHHHhCcccCeEEEE--EE--EecCCceEEEEEecc
Confidence            899999999986 2348999998763       33445678999999999999998544  33  334346899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      .|+|..++.. .....+...+.+.++.|||+|++||.++++|||||.+.||||    +.+..+||+|||+|+...++...
T Consensus       285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV----~~~~~vKIsDFGLAr~~~d~~Y~  359 (468)
T KOG0197|consen  285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV----DEDLVVKISDFGLARLIGDDEYT  359 (468)
T ss_pred             cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee----ccCceEEEcccccccccCCCcee
Confidence            9997777665 234568888889999999999999999999999999999999    88889999999999966665443


Q ss_pred             ceee---cccCCCCcccc
Q psy11822        213 TYLQ---SRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~g---t~~y~aPE~l~  227 (229)
                      ...|   ...|.|||.++
T Consensus       360 ~~~~~kfPIkWtAPEa~~  377 (468)
T KOG0197|consen  360 ASEGGKFPIKWTAPEALN  377 (468)
T ss_pred             ecCCCCCCceecCHHHHh
Confidence            3333   34599999985

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=4e-31  Score=218.26  Aligned_cols=164  Identities=20%  Similarity=0.216  Sum_probs=130.5

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.||+|++..+++.||+|++++.....   ....+.+.+|+.++..+ +||||+  .+++++.  .....++|||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~E~~~l~~~~~hp~iv--~~~~~~~--~~~~~~lv~E   76 (329)
T cd05618           4 GRGSYAKVLLVRLKKTERIYAMKVVKKELVND---DEDIDWVQTEKHVFEQASNHPFLV--GLHSCFQ--TESRLFFVIE   76 (329)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc---hhHHHHHHHHHHHHHhcCCCCcCC--ceeeEEE--eCCEEEEEEe
Confidence            34999999999999999999999998754322   12233557788887766 899997  4444443  3346799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc-
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~-  208 (229)
                      |+++++|......   ...+++..+..++.|++.||.|||+++|+||||||+||++    +.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili----~~~~~~kL~DfG~~~~~~~~  149 (329)
T cd05618          77 YVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRP  149 (329)
T ss_pred             CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCCEEEeeCCccccccCC
Confidence            9999997665444   3468888999999999999999999999999999999999    8888999999999975422 


Q ss_pred             -ccccceeecccCCCCccccC
Q psy11822        209 -AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 -~~~~~~~gt~~y~aPE~l~~  228 (229)
                       .......||+.|+|||++.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~  170 (329)
T cd05618         150 GDTTSTFCGTPNYIAPEILRG  170 (329)
T ss_pred             CCccccccCCccccCHHHHcC
Confidence             23345689999999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=5.4e-31  Score=216.77  Aligned_cols=164  Identities=21%  Similarity=0.173  Sum_probs=128.8

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.||+|++..+++.||+|++++.....   ....+.+..|++++..+ +||||+.  +++.+.  .....|+|||
T Consensus         4 G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~il~~~~~hp~i~~--~~~~~~--~~~~~~lv~E   76 (321)
T cd05591           4 GKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ---DDDVDCTMTEKRILALAAKHPFLTA--LHCCFQ--TKDRLFFVME   76 (321)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh---hhHHHHHHHHHHHHHhccCCCCccc--eeeEEE--cCCeEEEEEe
Confidence            34999999999999999999999987643221   12233456777777755 8999973  444443  3345799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++...+..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......
T Consensus        77 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill----~~~~~~kL~Dfg~~~~~~~~  149 (321)
T cd05591          77 YVNGGDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL----DAEGHCKLADFGMCKEGILN  149 (321)
T ss_pred             CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeecccceecccC
Confidence            9999997655544   3458888889999999999999999999999999999999    88889999999998764322


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|+|||++.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05591         150 GVTTTTFCGTPDYIAPEILQE  170 (321)
T ss_pred             CccccccccCccccCHHHHcC
Confidence              3345679999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=8.3e-31  Score=215.86  Aligned_cols=164  Identities=23%  Similarity=0.265  Sum_probs=128.5

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|++.   .+++.||+|+++......  .......+.+|+.+++.++||||+.  +++.+.  .....|+||
T Consensus         6 ~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~--~~~~~~--~~~~~~lv~   79 (323)
T cd05584           6 KGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR--NQKDTAHTKAERNILEAVKHPFIVD--LIYAFQ--TGGKLYLIL   79 (323)
T ss_pred             ecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh--hhhhHHHHHHHHHHHHhCCCCchhc--eeeEEe--cCCeEEEEE
Confidence            4999999999863   468999999988643321  1122335678999999999999974  444433  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus        80 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~  152 (323)
T cd05584          80 EYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL----DAQGHVKLTDFGLCKESIH  152 (323)
T ss_pred             eCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEeeCcCCeeccc
Confidence            99999997666544   3457777888899999999999999999999999999999    8888999999999875432


Q ss_pred             c--cccceeecccCCCCccccC
Q psy11822        209 A--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      .  ......||+.|+|||++.+
T Consensus       153 ~~~~~~~~~gt~~y~aPE~~~~  174 (323)
T cd05584         153 EGTVTHTFCGTIEYMAPEILMR  174 (323)
T ss_pred             CCCcccccCCCccccChhhccC
Confidence            2  2345689999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=6.9e-31  Score=216.49  Aligned_cols=163  Identities=18%  Similarity=0.201  Sum_probs=125.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccc-cccccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRI-TPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei-~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|++..+++.||+|++.........   ....+.+|. .+++.+.||||+.  +.+.+.  .....|+||||
T Consensus         5 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~~e~~~~l~~~~h~~Iv~--~~~~~~--~~~~~~lv~e~   77 (325)
T cd05602           5 KGSFGKVLLARHKAEEKFYAVKVLQKKAILKKK---EEKHIMSERNVLLKNVKHPFLVG--LHFSFQ--TADKLYFVLDY   77 (325)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhh---HHHHHHHHHHHHHHhCCCCCCCc--eeEEEE--cCCeEEEEEeC
Confidence            499999999999999999999998764332111   111223333 3467789999984  333333  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      ++++++...+..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....  
T Consensus        78 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili----~~~~~~kl~DfG~a~~~~~~~  150 (325)
T cd05602          78 INGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENIEHN  150 (325)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEEccCCCCcccccCC
Confidence            999997666554   3457778888899999999999999999999999999999    7788999999999976432  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05602         151 GTTSTFCGTPEYLAPEVLHK  170 (325)
T ss_pred             CCcccccCCccccCHHHHcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG4717|consensus

Probab=99.96  E-value=3.1e-31  Score=219.44  Aligned_cols=164  Identities=22%  Similarity=0.265  Sum_probs=139.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.|+.|.+|++.-||++||||++.+...+.....    ++.+|++.|+.++||||+  ++++..+  +...+|+|+|.-+
T Consensus        29 GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~----hlfqEVRCMKLVQHpNiV--RLYEViD--TQTKlyLiLELGD  100 (864)
T KOG4717|consen   29 GHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTG----HLFQEVRCMKLVQHPNIV--RLYEVID--TQTKLYLILELGD  100 (864)
T ss_pred             CceehhhhhhhhcccceeEEEEecccccchhhhh----HHHHHHHHHHHhcCcCee--eeeehhc--ccceEEEEEEecC
Confidence            8999999999999999999999998766644433    568899999999999998  5665555  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|++..++.+.  ...+.++.+.+++.||+.||.|+|+.++|||||||+||.+.   ...|.|||.|||++-.+.++ ..
T Consensus       101 ~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF---EKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen  101 GGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF---EKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             CchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe---eecCceEeeeccccccCCCcchh
Confidence            99954444432  34699999999999999999999999999999999999885   34579999999999888775 67


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.||...|-|||+|+|+
T Consensus       176 ~TsCGSLAYSAPEILLGD  193 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGD  193 (864)
T ss_pred             hcccchhhccCchhhhcC
Confidence            889999999999999984

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=7.7e-31  Score=216.11  Aligned_cols=163  Identities=20%  Similarity=0.161  Sum_probs=127.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcc-ccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAF-VTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-i~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|++.+.....   ....+.+..|++++..+.|++ |+  .+.+++.  ....+|+||||
T Consensus        10 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~i~--~~~~~~~--~~~~~~lv~E~   82 (324)
T cd05587          10 KGSFGKVMLAERKGTDELYAIKILKKDVIIQ---DDDVECTMVEKRVLALPGKPPFLT--QLHSCFQ--TMDRLYFVMEY   82 (324)
T ss_pred             eccCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhcCCCCcee--eeEEEEE--cCCEEEEEEcC
Confidence            3999999999999999999999988653221   223345677888888887765 43  2333332  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC--c
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--K  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--~  208 (229)
                      +++|+|...+..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++....  .
T Consensus        83 ~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          83 VNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----cCCCCEEEeecCcceecCCCC
Confidence            999997666544   3457888889999999999999999999999999999999    778899999999987542  2


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       156 ~~~~~~~gt~~y~aPE~~~~  175 (324)
T cd05587         156 KTTRTFCGTPDYIAPEIIAY  175 (324)
T ss_pred             CceeeecCCccccChhhhcC
Confidence            23345689999999999875

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=5.5e-31  Score=213.52  Aligned_cols=160  Identities=21%  Similarity=0.242  Sum_probs=124.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|+++....     ......+.+|+.+++.++||||+.  +++++.  .....++||||++
T Consensus        16 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~--~~~~~~--~~~~~~lv~e~~~   86 (288)
T cd07871          16 GTYATVFKGRSKLTENLVALKEIRLEHE-----EGAPCTAIREVSLLKNLKHANIVT--LHDIIH--TERCLTLVFEYLD   86 (288)
T ss_pred             CCCEEEEEEEECCCCCEEEEEEeccccc-----CCcchhHHHHHHHHHhCCCCCEee--EEEEEc--CCCeEEEEEeCCC
Confidence            8999999999999999999998865311     112234578999999999999974  444433  3345789999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      + ++.......  ...+++..+..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++.....  .
T Consensus        87 ~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~DfG~~~~~~~~~~~  159 (288)
T cd07871          87 S-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI----NEKGELKLADFGLARAKSVPTKT  159 (288)
T ss_pred             c-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEECcCcceeeccCCCcc
Confidence            7 443333221  2246777888999999999999999999999999999999    77789999999999865432  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             ccCceecccccChHHhcC
Confidence            345688999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.6e-31  Score=217.00  Aligned_cols=163  Identities=18%  Similarity=0.147  Sum_probs=125.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|++..+++.||+|++........   .....+..|..++...   .||||+.  +...+.  .....|+||
T Consensus         3 ~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~p~i~~--~~~~~~--~~~~~~lv~   75 (330)
T cd05586           3 KGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAK---KEVAHTIGERNILVRTLLDESPFIVG--LKFSFQ--TDSDLYLVT   75 (330)
T ss_pred             CCCceEEEEEEECCCCCEEEEEEEeHHHHhhh---hHHHHHHHHHHHHHHhccCCCCcCcc--eEEEEe--cCCeEEEEE
Confidence            48999999999999999999999876432211   1122334555555444   6999974  333333  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..   ...+++..+..++.||++||+|||++||+||||||+|||+    +.++.+||+|||++.....
T Consensus        76 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~a~~~~~  148 (330)
T cd05586          76 DYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL----DATGHIALCDFGLSKANLT  148 (330)
T ss_pred             cCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEecCCcCcCCCC
Confidence            99999997655544   3468888999999999999999999999999999999999    7788999999999876432


Q ss_pred             --ccccceeecccCCCCccccC
Q psy11822        209 --AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 --~~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......+||+.|+|||++.+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~  170 (330)
T cd05586         149 DNKTTNTFCGTTEYLAPEVLLD  170 (330)
T ss_pred             CCCCccCccCCccccCHHHHcC
Confidence              23345789999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=8.2e-31  Score=215.66  Aligned_cols=163  Identities=20%  Similarity=0.228  Sum_probs=126.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc-ccccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT-PGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|++..+++.||+|++.+.......   ....+.+|.. +++.++||||+.  +.+.+.  +....|+||||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~~e~~~~l~~~~h~~iv~--~~~~~~--~~~~~~lv~e~   77 (321)
T cd05603           5 KGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKK---EQNHIMAERNVLLKNLKHPFLVG--LHYSFQ--TAEKLYFVLDY   77 (321)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhh---HHHHHHHHHHHHHHhCCCCCccc--eeeEEE--cCCEEEEEEcC
Confidence            489999999999999999999998765432211   1223344443 567889999984  443333  34467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      ++++++......   ...+++..+..++.||+.||.|||++||+||||||+||++    +.++.+||+|||+++....  
T Consensus        78 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~  150 (321)
T cd05603          78 VNGGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL----DSQGHVVLTDFGLCKEGVEPE  150 (321)
T ss_pred             CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE----CCCCCEEEccCCCCccCCCCC
Confidence            999997555443   3457888888999999999999999999999999999999    8888999999999875422  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05603         151 ETTSTFCGTPEYLAPEVLRK  170 (321)
T ss_pred             CccccccCCcccCCHHHhcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=7.6e-31  Score=216.21  Aligned_cols=163  Identities=18%  Similarity=0.187  Sum_probs=126.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc-ccccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT-PGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+|+.||+|++.+......   .....+.+|.. +++.++||||+.  +++.+.  .....|+||||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~~e~~~~l~~~~hp~iv~--~~~~~~--~~~~~~lv~e~   77 (325)
T cd05604           5 KGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR---KEQKHIMAERNVLLKNVKHPFLVG--LHYSFQ--TTEKLYFVLDF   77 (325)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh---hHHHHHHHHHHHHHHhCCCCCCcc--EEEEEe--cCCEEEEEEcC
Confidence            49999999999999999999999876432211   11223344444 467789999974  433333  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      ++++++......   ...+++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....  
T Consensus        78 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll----~~~~~~kL~DfG~~~~~~~~~  150 (325)
T cd05604          78 VNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL----DSQGHVVLTDFGLCKEGIAQS  150 (325)
T ss_pred             CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEEeecCCcccCCCCC
Confidence            999997655444   3468888899999999999999999999999999999999    8888999999999875432  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05604         151 DTTTTFCGTPEYLAPEVIRK  170 (325)
T ss_pred             CCcccccCChhhCCHHHHcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=9e-31  Score=216.15  Aligned_cols=162  Identities=19%  Similarity=0.259  Sum_probs=131.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|+++......   ......+.+|+.+++.++|+||+.  +.+.+.  +....++||||++
T Consensus        12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~i~~~~~~~~i~~--~~~~~~--~~~~~~lv~e~~~   84 (330)
T cd05601          12 GHFGEVQVVREKATGDIYAMKVMKKSVLLA---QETVSFFEEERDILSISNSPWIPQ--LQYAFQ--DKDNLYLVMEYQP   84 (330)
T ss_pred             ccCEEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhCCCCCCcc--eeeEEe--cCCeEEEEECCCC
Confidence            899999999999999999999988753321   223446688999999999999974  333333  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +++|..++...  ...+++..+..++.|++.||.|||+.+|+||||||+|||+    +..+.+||+|||++..+....  
T Consensus        85 ~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          85 GGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI----DRTGHIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE----CCCCCEEeccCCCCeECCCCCce
Confidence            99977766542  1358888889999999999999999999999999999999    888899999999998775432  


Q ss_pred             -ccceeecccCCCCcccc
Q psy11822        211 -CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~  227 (229)
                       .....||+.|+|||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         159 NSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             eeecccCCccccCHHHhc
Confidence             23457999999999985

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0584|consensus

Probab=99.96  E-value=2.5e-31  Score=223.98  Aligned_cols=177  Identities=18%  Similarity=0.164  Sum_probs=145.6

Q ss_pred             cccccceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh
Q psy11822         41 SKEARKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH  117 (229)
Q Consensus        41 ~~~~~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~  117 (229)
                      ...+++..|...   |.|-+||+|.|..+|-.||.-.++-....  +....+++|..|+.+|+.|+||||+  ++++++.
T Consensus        36 ~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~--q~~~~leR~~~Ev~lLKsL~H~NIi--rfy~SW~  111 (632)
T KOG0584|consen   36 DPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT--QSPEELERLYSEVHLLKSLKHPNII--RFYDSWV  111 (632)
T ss_pred             CCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhh--cChHHHHHHHHHHHHHccCCCCcee--eeeehee
Confidence            334454444443   88999999999999999998877654332  3344567899999999999999998  5666666


Q ss_pred             cccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccE
Q psy11822        118 CNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       118 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                      +.....+.+|+|.+..|+|..+..+   .+.+....++.|++||+.||.|||++.  |||||||.+||||   ....|.|
T Consensus       112 d~~n~~in~iTEL~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFi---nG~~G~V  185 (632)
T KOG0584|consen  112 DTDNKTINFITELFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFV---NGNLGEV  185 (632)
T ss_pred             cCCCceeeeeeecccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEE---cCCcCce
Confidence            6555678899999999999888777   566777788999999999999999986  9999999999999   2345799


Q ss_pred             EEeecCcceecCcccccceeecccCCCCcccc
Q psy11822        196 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       196 kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~  227 (229)
                      ||+|+|||............|||.|||||+..
T Consensus       186 KIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE  217 (632)
T KOG0584|consen  186 KIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE  217 (632)
T ss_pred             eecchhHHHHhhccccceeccCccccChHHHh
Confidence            99999999998877667799999999999853

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=6.5e-31  Score=217.34  Aligned_cols=162  Identities=24%  Similarity=0.306  Sum_probs=125.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc---cccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN---NVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~---~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+|..||+|.++.....    ......+.+|+.+++.++||||+.  +.++....   .....|+|||
T Consensus        11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~--~~~~~~~~~~~~~~~~~lv~e   84 (338)
T cd07859          11 GSYGVVCSAIDTHTGEKVAIKKINDVFEH----VSDATRILREIKLLRLLRHPDIVE--IKHIMLPPSRREFKDIYVVFE   84 (338)
T ss_pred             cCCeEEEEEEECCCCCEEEEEEechhhcc----chhHHHHHHHHHHHHhCCCCCEee--ecceEeccCCCCCceEEEEEe
Confidence            99999999999999999999988753211    112235688999999999999974  33333221   2234799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+.+ ++...+..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus        85 ~~~~-~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          85 LMES-DLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA----NADCKLKICDFGLARVAFND  156 (338)
T ss_pred             cCCC-CHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEccCccccccccc
Confidence            9975 44333333   2458888899999999999999999999999999999999    88889999999999865322


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......||+.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhc
Confidence                 1234679999999998753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=8e-31  Score=216.31  Aligned_cols=164  Identities=19%  Similarity=0.194  Sum_probs=131.0

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.||+|++..+++.||+|++++.....   ....+.+.+|+.++.++ .||||+.  +.+.+.  ....+++|||
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~i~~--~~~~~~--~~~~~~lv~e   76 (327)
T cd05617           4 GRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD---DEDIDWVQTEKHVFEQASSNPFLVG--LHSCFQ--TTSRLFLVIE   76 (327)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhhcCCCCEee--EEEEEE--eCCEEEEEEe
Confidence            34899999999999999999999998754322   22344567888888877 6999873  443333  3346799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc-
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~-  208 (229)
                      |+++++|......   ...+++.+++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++.... 
T Consensus        77 ~~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili----~~~~~~kl~Dfg~~~~~~~~  149 (327)
T cd05617          77 YVNGGDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL----DADGHIKLTDYGMCKEGLGP  149 (327)
T ss_pred             CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----eCCCCEEEeccccceeccCC
Confidence            9999997665443   2458889999999999999999999999999999999999    7788999999999975422 


Q ss_pred             -ccccceeecccCCCCccccC
Q psy11822        209 -AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 -~~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......+||+.|+|||++.+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~  170 (327)
T cd05617         150 GDTTSTFCGTPNYIAPEILRG  170 (327)
T ss_pred             CCceecccCCcccCCHHHHCC
Confidence             23345789999999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.2e-30  Score=215.63  Aligned_cols=163  Identities=18%  Similarity=0.163  Sum_probs=129.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|++.+.....   ....+.+.+|+.+++.++|+||+.  +.+.+.  +...+|+||||+
T Consensus        11 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~--~~~~~~--~~~~~~lv~e~~   83 (331)
T cd05597          11 RGAFGEVAVVKMKNTGQVYAMKILNKWEMLK---RAETACFREERDVLVNGDRRWITN--LHYAFQ--DENNLYLVMDYY   83 (331)
T ss_pred             ecCCeEEEEEEECCCCCEEEEEEEEHHHHhh---hhhHHHHHHHHHHHHhCCCCCCCc--eEEEEe--cCCeEEEEEecC
Confidence            3999999999999999999999987632211   222345678899999999999974  333333  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      ++++|..++...  ...+++..+..++.|++.||+|||+++|+||||||+|||+    +.++.+||+|||++..+.... 
T Consensus        84 ~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          84 VGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL----DKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             CCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE----CCCCCEEEEECCceeecCCCCC
Confidence            999977665431  2358888899999999999999999999999999999999    778899999999997764431 


Q ss_pred             --ccceeecccCCCCcccc
Q psy11822        211 --CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 --~~~~~gt~~y~aPE~l~  227 (229)
                        .....||+.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             ccccceeccccccCHHHHh
Confidence              22357999999999985

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=1.3e-30  Score=217.54  Aligned_cols=160  Identities=27%  Similarity=0.374  Sum_probs=125.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|++......    ......+.+|+.+++.++||||+.  +++++...    .....|+||
T Consensus        32 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~--~~~~~~~~~~~~~~~~~~lv~  105 (359)
T cd07876          32 GAQGIVCAAFDTVLGINVAVKKLSRPFQN----QTHAKRAYRELVLLKCVNHKNIIS--LLNVFTPQKSLEEFQDVYLVM  105 (359)
T ss_pred             CCCEEEEEEEEcCCCceeEEEEecccccc----hhHHHHHHHHHHHHHhCCCCCEee--eeeeeccCCCccccceeEEEE
Confidence            99999999999999999999998754221    112335578999999999999984  44443221    123468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++....+..      .+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       106 e~~~~~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~----~~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876         106 ELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTACT  175 (359)
T ss_pred             eCCCcCHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEecCCCcccccc
Confidence            9998876544322      36777788899999999999999999999999999999    7788999999999986543


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......||+.|+|||++.+
T Consensus       176 ~~~~~~~~~t~~y~aPE~~~~  196 (359)
T cd07876         176 NFMMTPYVVTRYYRAPEVILG  196 (359)
T ss_pred             CccCCCCcccCCCCCchhccC
Confidence            3 3345688999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0690|consensus

Probab=99.96  E-value=1.2e-30  Score=205.49  Aligned_cols=165  Identities=21%  Similarity=0.221  Sum_probs=136.4

Q ss_pred             cccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         50 NCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .+.|.||.|-+|+.+.+|+.||+|+++++..-.   ...+..-..|-++|+..+||++..+.   |. ..+...+++|||
T Consensus       176 LGkGTFGKVIL~rEKat~k~YAiKIlkKeviia---kdEVAHTlTE~RVL~~~~HPFLt~LK---Ys-FQt~drlCFVMe  248 (516)
T KOG0690|consen  176 LGKGTFGKVILCREKATGKLYAIKILKKEVIIA---KDEVAHTLTENRVLQNCRHPFLTSLK---YS-FQTQDRLCFVME  248 (516)
T ss_pred             hcCCccceEEEEeecccCceeehhhhhhhheee---hHHhhhhhhHHHHHHhccCcHHHHhh---hh-hccCceEEEEEE
Confidence            334999999999999999999999999865432   12233457788899999999986322   22 224456899999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc-
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~-  208 (229)
                      |+.||.|-..+..   ...+++..++.+...|++||.|||+++||.||||.+|.|+    +.+|++||+|||+++.--. 
T Consensus       249 yanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL----DkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  249 YANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL----DKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             EccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee----ccCCceEeeecccchhcccc
Confidence            9999997666555   5679999999999999999999999999999999999999    9999999999999986532 


Q ss_pred             -ccccceeecccCCCCccccC
Q psy11822        209 -AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 -~~~~~~~gt~~y~aPE~l~~  228 (229)
                       ....+.||||.|+|||+|.+
T Consensus       322 g~t~kTFCGTPEYLAPEVleD  342 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLED  342 (516)
T ss_pred             cceeccccCChhhcCchhhcc
Confidence             35678999999999999864

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.9e-30  Score=218.82  Aligned_cols=152  Identities=22%  Similarity=0.196  Sum_probs=121.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|....            ..+.+|+++++.++||||+.  +++++.  .....++|||++.
T Consensus       103 G~~g~V~~~~d~~~~~~vaiK~~~~------------~~~~~E~~il~~l~HpnIv~--~~~~~~--~~~~~~lv~e~~~  166 (391)
T PHA03212        103 GAEGFAFACIDNKTCEHVVIKAGQR------------GGTATEAHILRAINHPSIIQ--LKGTFT--YNKFTCLILPRYK  166 (391)
T ss_pred             CCCeEEEEEEECCCCCEEEEechhh------------hhhHHHHHHHHhCCCCCCCC--EeEEEE--ECCeeEEEEecCC
Confidence            9999999999999999999996532            13478999999999999984  444443  2345789999987


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc---c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---A  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~---~  209 (229)
                      +..+..+..    ...+++.+++.++.|++.||.|||++||+||||||+|||+    +..+.+||+|||+|+....   .
T Consensus       167 ~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll----~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        167 TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI----NHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE----cCCCCEEEEeCCccccccccccc
Confidence            544433322    2357888889999999999999999999999999999999    7778999999999975432   2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       239 ~~~~~~gt~~y~aPE~~~~  257 (391)
T PHA03212        239 KYYGWAGTIATNAPELLAR  257 (391)
T ss_pred             ccccccCccCCCChhhhcC
Confidence            3345689999999999865

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=1e-30  Score=211.54  Aligned_cols=161  Identities=20%  Similarity=0.281  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++.....    ....+.+.+|+.+++.++||||+  .+.+.+.  .....++||||++
T Consensus        12 g~~~~v~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   83 (287)
T cd07848          12 GAYGVVLKCRHKETKEIVAIKKFKDSEEN----EEVKETTLRELKMLRTLKQENIV--ELKEAFR--RRGKLYLVFEYVE   83 (287)
T ss_pred             cCCEEEEEEEECCCCcEEEEEEEeccccc----ccchhhHHHHHHHHHhCCCcccc--chhhhEe--cCCEEEEEEecCC
Confidence            89999999999999999999998653211    22334567899999999999997  4554443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..+...   ...+++..++.++.|++.||.|||+.+|+||||||+||++    +.++.+||+|||++......   
T Consensus        84 ~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~  156 (287)
T cd07848          84 KNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI----SHNDVLKLCDFGFARNLSEGSNA  156 (287)
T ss_pred             CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccCcccccccccc
Confidence            9886655433   2358888889999999999999999999999999999999    77789999999999876432   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (287)
T cd07848         157 NYTEYVATRWYRSPELLLG  175 (287)
T ss_pred             cccccccccccCCcHHHcC
Confidence            2234679999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=1e-30  Score=214.73  Aligned_cols=163  Identities=21%  Similarity=0.214  Sum_probs=127.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc-ccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA-LNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|++..+|+.||+|++++.....   ......+..|+.++.. +.||||+  ++++.+.  +...+|+||||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~i~--~~~~~~~--~~~~~~lv~E~   77 (316)
T cd05620           5 KGSFGKVLLAELKGKGEYFAVKALKKDVVLI---DDDVECTMVEKRVLALAWENPFLT--HLYCTFQ--TKEHLFFVMEF   77 (316)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---cchHHHHHHHHHHHHhccCCCCcc--CeeEEEE--eCCEEEEEECC
Confidence            4899999999999999999999988753321   1122344667777764 4899997  4444443  34568999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC--c
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--K  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--~  208 (229)
                      +.+++|...+..   ...+++.++..++.|++.||+|||++||+||||||+|||+    +.++.++|+|||+++...  .
T Consensus        78 ~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05620          78 LNGGDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML----DRDGHIKIADFGMCKENVFGD  150 (316)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE----CCCCCEEeCccCCCeecccCC
Confidence            999997666544   3457888889999999999999999999999999999999    778899999999987542  2


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05620         151 NRASTFCGTPDYIAPEILQG  170 (316)
T ss_pred             CceeccCCCcCccCHHHHcC
Confidence            23356789999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=1.5e-30  Score=214.42  Aligned_cols=164  Identities=20%  Similarity=0.190  Sum_probs=127.6

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-ccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      +.|+||.||+|.+..+|+.||+|++++.....   ....+.+..|+.+++.+.| ++|+  .+..++.  ....+|+|||
T Consensus         9 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~i~--~~~~~~~--~~~~~~lv~E   81 (323)
T cd05615           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---DDDVECTMVEKRVLALQDKPPFLT--QLHSCFQ--TVDRLYFVME   81 (323)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhccCCCchh--heeeEEe--cCCEEEEEEc
Confidence            34999999999999999999999988643221   2223345678888887765 5554  2333332  3345799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus        82 y~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill----~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          82 YVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML----DSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEeccccccccCCC
Confidence            9999997666544   3458889999999999999999999999999999999999    78889999999998765322


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|+|||++.+
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05615         155 GVTTRTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CccccCccCCccccCHHHHcC
Confidence              2345679999999999865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=2.8e-30  Score=211.93  Aligned_cols=167  Identities=20%  Similarity=0.195  Sum_probs=125.7

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|++.  .+++.||+|.+....        ....+.+|+.+++.++||||+.  +.+.+.......++++||
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--------~~~~~~~E~~~l~~l~h~niv~--~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868          11 RGTYGHVYKAKRKDGKDDRDYALKQIEGTG--------ISMSACREIALLRELKHPNVIS--LQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             cCCCeEEEEEEEccCCCCceEEEEEECCCC--------CcHHHHHHHHHHHhcCCCCCcc--eeeeEecCCCcEEEEEEe
Confidence            3999999999865  467899999876421        1123478999999999999984  444443334456789999


Q ss_pred             eeeCCCCCccCC-----CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        130 VTRRSQYTGATA-----PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       130 ~~~~~~l~~~~~-----~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      |+.++.+..+..     .......+++..++.++.|++.||.|||++||+||||||+|||+....+..+.+||+|||+|+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          81 YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             ccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            998764322211     111123477788899999999999999999999999999999996654566799999999998


Q ss_pred             ecCcc-----cccceeecccCCCCccccC
Q psy11822        205 HVSKA-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....     ......||+.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         161 LFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             ccCCCCccccccCCccccccccCCHHHcC
Confidence            76542     2245688999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=1.5e-30  Score=213.68  Aligned_cols=163  Identities=21%  Similarity=0.223  Sum_probs=127.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc-ccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA-LNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|+++......   ......+..|..+++. +.||||+  ++++.+.  +...+++||||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~hp~iv--~~~~~~~--~~~~~~lv~ey   77 (316)
T cd05619           5 KGSFGKVFLAELKGTNQFFAIKALKKDVVLM---DDDVECTMVEKRVLSLAWEHPFLT--HLYCTFQ--TKENLFFVMEY   77 (316)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---cchHHHHHHHHHHHHhccCCCcCc--ceEEEEE--eCCEEEEEEeC
Confidence            4899999999999999999999988753221   1112234566667765 4999997  3444443  34467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      +++|+|...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++.....  
T Consensus        78 ~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05619          78 LNGGDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL----DTDGHIKIADFGMCKENMLGD  150 (316)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE----CCCCCEEEccCCcceECCCCC
Confidence            999997766554   2457888889999999999999999999999999999999    7788999999999876422  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .......||+.|+|||++.+
T Consensus       151 ~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05619         151 AKTCTFCGTPDYIAPEILLG  170 (316)
T ss_pred             CceeeecCCccccCHHHHcC
Confidence            23345689999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG3653|consensus

Probab=99.96  E-value=2.3e-30  Score=211.86  Aligned_cols=157  Identities=17%  Similarity=0.198  Sum_probs=127.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc--ccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN--VKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~--~~~~~lv~e~  130 (229)
                      |.||.||+|...  ++.||||+++........   +    +++|.-+=.+.|+||+  .++......+  ...+++|++|
T Consensus       221 Grfg~V~KaqL~--~~~VAVKifp~~~kqs~~---~----Ek~Iy~lp~m~h~nIl--~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  221 GRFGCVWKAQLD--NRLVAVKIFPEQEKQSFQ---N----EKNIYSLPGMKHENIL--QFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             Cccceeehhhcc--CceeEEEecCHHHHHHHH---h----HHHHHhccCccchhHH--HhhchhccCCccccceeEEeee
Confidence            999999999876  699999999875332111   1    3344444567999997  5555544333  4567999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH---------CCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ---------LGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~---------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      .+.|+|..++..    ..++|.+.++++..+++||+|||.         ..|+|||||+.|||+    ..++++.|+|||
T Consensus       290 h~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv----K~DlTccIaDFG  361 (534)
T KOG3653|consen  290 HPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV----KNDLTCCIADFG  361 (534)
T ss_pred             ccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE----ccCCcEEeeccc
Confidence            999999888776    579999999999999999999995         359999999999999    888899999999


Q ss_pred             cceecCcc----cccceeecccCCCCccccC
Q psy11822        202 SASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      +|.++.+.    .....+||..|||||+|.|
T Consensus       362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEg  392 (534)
T KOG3653|consen  362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEG  392 (534)
T ss_pred             eeEEecCCCCCcchhhhhhhhhhcCHHHHhh
Confidence            99998754    3345799999999999976

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.4e-30  Score=213.92  Aligned_cols=162  Identities=20%  Similarity=0.254  Sum_probs=129.2

Q ss_pred             cCCceeeeeeec---CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTD---LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||++++   ..+|+.||+|+++......    .....+.+|++++++++||||+.  +++.+.  .....|+||
T Consensus         6 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~--~~~~~~--~~~~~~lv~   77 (318)
T cd05582           6 QGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV----RDRVRTKMERDILAEVNHPFIVK--LHYAFQ--TEGKLYLIL   77 (318)
T ss_pred             eCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHhCCCCCccc--EEEEEE--cCCEEEEEE
Confidence            489999999876   3578999999988754321    12234578999999999999984  444433  334679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++.....
T Consensus        78 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~  150 (318)
T cd05582          78 DFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESID  150 (318)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE----CCCCcEEEeeccCCcccCC
Confidence            99999997655544   3458888999999999999999999999999999999999    7788999999999986644


Q ss_pred             c--cccceeecccCCCCccccC
Q psy11822        209 A--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      .  ......||+.|+|||++.+
T Consensus       151 ~~~~~~~~~g~~~y~aPE~~~~  172 (318)
T cd05582         151 HEKKAYSFCGTVEYMAPEVVNR  172 (318)
T ss_pred             CCCceecccCChhhcCHHHHcC
Confidence            3  2345689999999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=2e-30  Score=214.28  Aligned_cols=164  Identities=19%  Similarity=0.217  Sum_probs=128.0

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|++.   .+++.||+|++.+.....  .....+.+.+|+.+++.+ .|+||+.+  .+.+.  ....+++|
T Consensus        10 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~i~~~--~~~~~--~~~~~~lv   83 (332)
T cd05614          10 TGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ--KAKTVEHTRTERNVLEHVRQSPFLVTL--HYAFQ--TEAKLHLI   83 (332)
T ss_pred             ecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh--hhhHHHHHHHHHHHHHhccCCCCcccE--EEEEe--cCCEEEEE
Confidence            3999999998763   578999999987643321  122334567899999999 58998743  33332  33457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++|++...+..   ...+++.++..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++...
T Consensus        84 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili----~~~~~~kl~DfG~~~~~~  156 (332)
T cd05614          84 LDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL----DSEGHVVLTDFGLSKEFL  156 (332)
T ss_pred             EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE----CCCCCEEEeeCcCCcccc
Confidence            999999997665543   2458888899999999999999999999999999999999    778899999999998653


Q ss_pred             cc---cccceeecccCCCCccccC
Q psy11822        208 KA---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   .....+||+.|+|||++.+
T Consensus       157 ~~~~~~~~~~~gt~~y~aPE~~~~  180 (332)
T cd05614         157 SEEKERTYSFCGTIEYMAPEIIRG  180 (332)
T ss_pred             ccCCCccccccCCccccCHHHhcC
Confidence            32   2235689999999999865

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=2.1e-30  Score=214.10  Aligned_cols=164  Identities=16%  Similarity=0.134  Sum_probs=129.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|++.+.....   ......+.+|+.++..+.|+||+.  +.+++.  +....|+||||+
T Consensus        11 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~--l~~~~~--~~~~~~lv~Ey~   83 (331)
T cd05624          11 RGAFGEVAVVKMKHTERIYAMKILNKWEMLK---RAETACFREERNVLVNGDCQWITT--LHYAFQ--DENYLYLVMDYY   83 (331)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEeHHHHHh---hHHHHHHHHHHHHHHhCCCCCEee--EEEEEE--cCCEEEEEEeCC
Confidence            3999999999999999999999987632211   122334678888999999999974  333333  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      ++|+|..++...  ...+++..+..++.|++.||.|||++||+||||||+|||+    +..+.+||+|||++....... 
T Consensus        84 ~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          84 VGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL----DMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             CCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE----cCCCCEEEEeccceeeccCCCc
Confidence            999977765431  1357888889999999999999999999999999999999    778899999999998765432 


Q ss_pred             --ccceeecccCCCCccccC
Q psy11822        211 --CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 --~~~~~gt~~y~aPE~l~~  228 (229)
                        .....||+.|+|||++.+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             eeeccccCCcccCCHHHHhc
Confidence              234579999999998753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=1.5e-30  Score=222.51  Aligned_cols=162  Identities=24%  Similarity=0.292  Sum_probs=121.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||||.+....          ....+|+.+++.++||||+.+.-+.+..+    .....+++||
T Consensus        77 G~fg~Vy~~~~~~~~~~vAiK~i~~~~----------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm  146 (440)
T PTZ00036         77 GSFGVVYEAICIDTSEKVAIKKVLQDP----------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM  146 (440)
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEecCc----------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence            999999999999999999999875421          12256899999999999985332211111    1122467899


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~~~~  207 (229)
                      ||++++....+.........+++..++.++.|++.||+|||+++|+||||||+|||+    +.. +.+||+|||+|+.+.
T Consensus       147 E~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl----~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        147 EFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI----DPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             ecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE----cCCCCceeeeccccchhcc
Confidence            999976533332111123458888889999999999999999999999999999999    543 479999999998765


Q ss_pred             cc-cccceeecccCCCCccccC
Q psy11822        208 KA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .. ......||+.|+|||++.+
T Consensus       223 ~~~~~~~~~~t~~y~aPE~~~~  244 (440)
T PTZ00036        223 AGQRSVSYICSRFYRAPELMLG  244 (440)
T ss_pred             CCCCcccCCCCcCccCHHHhcC
Confidence            43 3345688999999999865

>KOG0607|consensus

Probab=99.96  E-value=9e-31  Score=205.54  Aligned_cols=160  Identities=22%  Similarity=0.241  Sum_probs=135.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.|+.|-.|....||..||||++.+.      ....+.++.||++++... .|+||+  .++++++.  +..+|+|||-+
T Consensus        89 GAyasVqtcv~i~t~~EYAVKiidKq------~gHsR~RvfREVe~f~~Cqgh~nil--qLiefFEd--d~~FYLVfEKm  158 (463)
T KOG0607|consen   89 GAYASVQTCVSIQTGKEYAVKIIDKQ------PGHSRSRVFREVETFYQCQGHKNIL--QLIEFFED--DTRFYLVFEKM  158 (463)
T ss_pred             ccceeeeeeeeeccchhhhhhhhhcC------CchHHHHHHHHHHHHHHhcCCccHH--HHHHHhcc--cceEEEEEecc
Confidence            88999999999999999999999874      344566889999999888 799997  78888874  45689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec-----
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-----  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~-----  206 (229)
                      .||++...+.+   ...+++.++..+...|+.||.+||.+||.||||||+|||...+ ++-..+|||||.++.-.     
T Consensus       159 ~GGplLshI~~---~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p-n~vsPvKiCDfDLgSg~k~~~~  234 (463)
T KOG0607|consen  159 RGGPLLSHIQK---RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP-NKVSPVKICDFDLGSGIKLNND  234 (463)
T ss_pred             cCchHHHHHHH---hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC-CCcCceeeeccccccccccCCC
Confidence            99995444444   3579999999999999999999999999999999999999777 66679999999987544     


Q ss_pred             ----CcccccceeecccCCCCccc
Q psy11822        207 ----SKAVCNTYLQSRYYRAPEII  226 (229)
Q Consensus       207 ----~~~~~~~~~gt~~y~aPE~l  226 (229)
                          ..+...+++|+..|||||+.
T Consensus       235 ~spastP~L~tPvGSAEfMAPEVV  258 (463)
T KOG0607|consen  235 CSPASTPELLTPVGSAEFMAPEVV  258 (463)
T ss_pred             CCCCCCccccCcccchhhcchhHH
Confidence                12345678999999999985

>KOG0667|consensus

Probab=99.96  E-value=2.1e-30  Score=219.56  Aligned_cols=162  Identities=40%  Similarity=0.538  Sum_probs=132.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Ccccc---ceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVT---LAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~---~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |.||+|-+|.+..|++.||||+++..       .....+...|+++|..++ |.+-.   .+++++++...  ...+||+
T Consensus       197 GtFGQVvk~~d~~T~e~VAIKIiKN~-------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr--~HlciVf  267 (586)
T KOG0667|consen  197 GSFGQVVKAYDHKTGEIVAIKIIKNK-------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR--NHLCIVF  267 (586)
T ss_pred             cccceeEEEEecCCCcEEEEEeeccC-------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc--cceeeee
Confidence            89999999999999999999999864       222335578899998886 43211   23677777644  4689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |.+..++++.+..+.  ...++...++.++.||+.||.+||+.+|||+||||+|||+......  .|||+|||.|.....
T Consensus       268 ELL~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~--~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  268 ELLSTNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS--RIKVIDFGSSCFESQ  343 (586)
T ss_pred             hhhhhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC--ceeEEecccccccCC
Confidence            999998865554442  2358889999999999999999999999999999999999776433  999999999998777


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... +++.+..|+|||+++|
T Consensus       344 ~vy-tYiQSRfYRAPEVILG  362 (586)
T KOG0667|consen  344 RVY-TYIQSRFYRAPEVILG  362 (586)
T ss_pred             cce-eeeeccccccchhhcc
Confidence            665 8899999999999987

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=4.1e-30  Score=214.15  Aligned_cols=155  Identities=23%  Similarity=0.280  Sum_probs=124.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++.....     ......+.+|+++++.++|+||+  .+++++.  ....+++||||++
T Consensus        85 G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  155 (353)
T PLN00034         85 GAGGTVYKVIHRPTGRLYALKVIYGNHE-----DTVRRQICREIEILRDVNHPNVV--KCHDMFD--HNGEIQVLLEFMD  155 (353)
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEecCCc-----HHHHHHHHHHHHHHHhCCCCCcc--eeeeEec--cCCeEEEEEecCC
Confidence            8999999999999999999999854321     12234668999999999999997  4454443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++....       ..++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++.+...  .
T Consensus       156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI----NSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEcccccceeccccccc
Confidence            99875432       23455567899999999999999999999999999999    77889999999999876543  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....||..|+|||++.
T Consensus       225 ~~~~~gt~~y~aPE~~~  241 (353)
T PLN00034        225 CNSSVGTIAYMSPERIN  241 (353)
T ss_pred             ccccccCccccCccccc
Confidence            34568999999999874

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=3.4e-30  Score=212.20  Aligned_cols=163  Identities=20%  Similarity=0.173  Sum_probs=126.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|++++.....   ......+..|..++..+ .|++|+.  +.+++.  .....++||||
T Consensus        10 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~i~~--~~~~~~--~~~~~~lv~E~   82 (323)
T cd05616          10 KGSFGKVMLAERKGTDELYAIKILKKDVVIQ---DDDVECTMVEKRVLALSGKPPFLTQ--LHSCFQ--TMDRLYFVMEY   82 (323)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---hhHHHHHHHHHHHHHhccCCCeEee--EEEEEe--cCCEEEEEEcC
Confidence            3999999999999999999999988643221   11223446677777666 5777753  333333  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      +++|++...+..   ...+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....  
T Consensus        83 ~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kL~DfG~~~~~~~~~  155 (323)
T cd05616          83 VNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENMWDG  155 (323)
T ss_pred             CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE----CCCCcEEEccCCCceecCCCC
Confidence            999997665544   3458888899999999999999999999999999999999    8888999999999986532  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       156 ~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05616         156 VTTKTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CccccCCCChhhcCHHHhcC
Confidence            23345689999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=3.1e-30  Score=212.02  Aligned_cols=163  Identities=20%  Similarity=0.177  Sum_probs=129.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|++++.....   ....+.+.+|+.++..+ +||||+.  +++.+.  ....+++||||
T Consensus         5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~il~~~~~h~~i~~--~~~~~~--~~~~~~lv~e~   77 (318)
T cd05570           5 KGSFGKVLLAELKGTDELYAVKVLKKDVILQ---DDDVECTMTEKRVLALAGKHPFLTQ--LHSCFQ--TKDRLFFVMEY   77 (318)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEEHHHHhh---hhHHHHHHHHHHHHHhccCCCCccc--eeeEEE--cCCEEEEEEcC
Confidence            4899999999999999999999988753321   12233456788888777 7999974  444433  33468999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--  208 (229)
                      +++++|......   ...+++..+..++.|++.||+|||+++|+||||||+||++    +.++.+||+|||+++....  
T Consensus        78 ~~~~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~  150 (318)
T cd05570          78 VNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL----DSEGHIKIADFGMCKEGILGG  150 (318)
T ss_pred             CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE----CCCCcEEecccCCCeecCcCC
Confidence            999997666554   3468888999999999999999999999999999999999    7788999999999875322  


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       151 ~~~~~~~g~~~y~aPE~~~~  170 (318)
T cd05570         151 VTTSTFCGTPDYIAPEILSY  170 (318)
T ss_pred             CcccceecCccccCHHHhcC
Confidence            23345679999999999865

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0986|consensus

Probab=99.96  E-value=3.7e-30  Score=209.90  Aligned_cols=177  Identities=18%  Similarity=0.154  Sum_probs=145.7

Q ss_pred             cccccceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc
Q psy11822         41 SKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN  120 (229)
Q Consensus        41 ~~~~~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~  120 (229)
                      .+..+-|++.+.|+||+||-|.-..||+-||+|.+.+.....   ........+|-.+|.+++.++||  .+...++  +
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk---r~ge~maLnEk~iL~kV~s~FiV--slaYAfe--T  256 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK---RKGETMALNEKQILEKVSSPFIV--SLAYAFE--T  256 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH---hhhhHHhhHHHHHHHHhccCcEE--EEeeeec--C
Confidence            344566777777999999999999999999999988754432   11122347889999999999887  3332223  4


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ...+++||..|+||+|...+.+..+ ..+++..++.++.+|+-||.+||..+||.||+||+|||+    +..|+++|+|+
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL----Dd~GhvRISDL  331 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL----DDHGHVRISDL  331 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee----ccCCCeEeecc
Confidence            4568999999999999888877654 479999999999999999999999999999999999999    99999999999


Q ss_pred             CcceecCccc-ccceeecccCCCCccccCC
Q psy11822        201 GSASHVSKAV-CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       201 g~a~~~~~~~-~~~~~gt~~y~aPE~l~~~  229 (229)
                      |+|..++... ....+||.+|||||++.++
T Consensus       332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne  361 (591)
T KOG0986|consen  332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNE  361 (591)
T ss_pred             ceEEecCCCCccccccCcccccCHHHHcCC
Confidence            9999997763 3445999999999999764

>KOG0662|consensus

Probab=99.96  E-value=3.5e-31  Score=192.95  Aligned_cols=161  Identities=24%  Similarity=0.267  Sum_probs=133.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|+...+++.||+|.++....++    .......+||-+++.+.|.||++  +++..+  .++.+.+|+|||+
T Consensus        13 gtygtvfkarn~~t~eivalkrvrldddde----gvpssalreicllkelkhknivr--l~dvlh--sdkkltlvfe~cd   84 (292)
T KOG0662|consen   13 GTYGTVFKARNRETHEIVALKRVRLDDDDE----GVPSSALREICLLKELKHKNIVR--LHDVLH--SDKKLTLVFEFCD   84 (292)
T ss_pred             CcceeeEecccCCccceEEEEEEeccCCCC----CCcHHHHHHHHHHHHhhhcceee--hhhhhc--cCceeEEeHHHhh
Confidence            899999999999999999999987643221    12234589999999999999984  555544  4456889999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ...-+.+...   .+.++.+.+++++.|+++||.++|+++++|||+||.|.++    +.+|++||+|||+|+.+.-+  .
T Consensus        85 qdlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli----n~ngelkladfglarafgipvrc  157 (292)
T KOG0662|consen   85 QDLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVRC  157 (292)
T ss_pred             HHHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe----ccCCcEEecccchhhhcCCceEe
Confidence            8764444333   3458888889999999999999999999999999999999    99999999999999988665  4


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .+..+-|.+|++|.++.|
T Consensus       158 ysaevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFG  175 (292)
T ss_pred             eeceeeeeeccCcceeee
Confidence            567789999999999976

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=3.7e-30  Score=212.68  Aligned_cols=160  Identities=21%  Similarity=0.294  Sum_probs=131.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|..+|+|.+.....     ......+.+|+++++.++||||+.  +++++.  .....++||||++
T Consensus        16 G~~g~V~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~e~~~   86 (331)
T cd06649          16 GNGGVVTKVQHKPSGLIMARKLIHLEIK-----PAIRNQIIRELQVLHECNSPYIVG--FYGAFY--SDGEISICMEHMD   86 (331)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeecccC-----HHHHHHHHHHHHHHHHCCCCCCCe--EEEEEE--ECCEEEEEeecCC
Confidence            8999999999999999999999875321     112346789999999999999974  444433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++|..++..   ...+++..+..++.|++.||.|||+. +|+||||||+|||+    +.++.+||+|||++........
T Consensus        87 ~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  159 (331)
T cd06649          87 GGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  159 (331)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE----cCCCcEEEccCccccccccccc
Confidence            9998777654   33578888899999999999999986 69999999999999    7778999999999987765555


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       160 ~~~~g~~~y~aPE~~~~  176 (331)
T cd06649         160 NSFVGTRSYMSPERLQG  176 (331)
T ss_pred             ccCCCCcCcCCHhHhcC
Confidence            56789999999999865

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4645|consensus

Probab=99.96  E-value=6.9e-31  Score=235.60  Aligned_cols=168  Identities=26%  Similarity=0.301  Sum_probs=139.5

Q ss_pred             ceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         46 KYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        46 ~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      +..+.+.|.||.||.|.+..||+..|+|.++-....    ......+.+|+.++..++|||++.+..++.    ....++
T Consensus      1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~----~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv----HRekv~ 1310 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD----HKTFKLIAEEMKVLEGLNHPNLVRYYGVEV----HREKVY 1310 (1509)
T ss_pred             cccccCCcceeeeEEeecCCccchhhhhhhhcCccc----cccCcchHHHHHHHHhccCccccccCceee----cHHHHH
Confidence            344555589999999999999999999988764332    445667789999999999999987665544    334578


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      |.||||.+|+|..+...   .+..++....-+..|++.|+.|||+.|||||||||.|||+    +.+|.+|++|||.|..
T Consensus      1311 IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L----d~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL----DFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred             HHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee----ecCCcEEeecccceeE
Confidence            99999999998888776   3345555667889999999999999999999999999999    8888999999999998


Q ss_pred             cCcc------cccceeecccCCCCccccC
Q psy11822        206 VSKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      +...      ......||+.|||||++.|
T Consensus      1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~ 1412 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITG 1412 (1509)
T ss_pred             ecCchhcCCHHHHhhcCCchhcCchhhcc
Confidence            8553      3456899999999999976

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8e-30  Score=206.40  Aligned_cols=166  Identities=17%  Similarity=0.134  Sum_probs=131.1

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+++.||+|++.......   ......+.+|+.+++.++||||+.  +.+.+.  .....++||||
T Consensus         9 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~e~   81 (285)
T cd05605           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKK---RKGEAMALNEKQILEKVNSRFVVS--LAYAYE--TKDALCLVLTL   81 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhhhh---hhhHHHHHHHHHHHHhcCCCCEee--eeeeec--CCCeEEEEEec
Confidence            34999999999999899999999987643221   112334578999999999999974  443333  33468999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.++++...+.... ...+++..+..++.|++.||.|||+.+++||||||+||++    +..+.++|+|||++...... 
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          82 MNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL----DDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             cCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE----CCCCCEEEeeCCCceecCCCC
Confidence            99999765543321 2358888899999999999999999999999999999999    77789999999999876543 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|++.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             ccccccCCCCccCcHHhcC
Confidence            2234578999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=2.7e-30  Score=213.94  Aligned_cols=165  Identities=19%  Similarity=0.141  Sum_probs=121.2

Q ss_pred             cCCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccc
Q psy11822         52 LDDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .|+||.||+|.+     ..+++.||+|+++....     ......+.+|+.+++.+ +||||+  .+++++.. ....++
T Consensus        17 ~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~niv--~~~~~~~~-~~~~~~   88 (338)
T cd05102          17 HGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-----ASEHKALMSELKILIHIGNHLNVV--NLLGACTK-PNGPLM   88 (338)
T ss_pred             cCCcceEEEEEEeccCCcccchhhheeccccccc-----hHHHHHHHHHHHHHHHhccCccee--eEEeEecC-CCCceE
Confidence            399999999974     24567899999865321     11223568899999999 899997  44443322 223478


Q ss_pred             eeeeeeeCCCCCccCCCCCC-----------------------------------------------------------C
Q psy11822        126 QMMEVTRRSQYTGATAPPPP-----------------------------------------------------------A  146 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~-----------------------------------------------------------~  146 (229)
                      +||||+++|+|..++.....                                                           .
T Consensus        89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (338)
T cd05102          89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK  168 (338)
T ss_pred             EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence            99999999997555432110                                                           1


Q ss_pred             CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc----cccceeecccCCC
Q psy11822        147 QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRA  222 (229)
Q Consensus       147 ~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~a  222 (229)
                      ..+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....    ......+++.|+|
T Consensus       169 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         169 SPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE----cCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence            235556667889999999999999999999999999999    77789999999999876432    1123455678999


Q ss_pred             CccccC
Q psy11822        223 PEIILG  228 (229)
Q Consensus       223 PE~l~~  228 (229)
                      ||++.+
T Consensus       245 PE~~~~  250 (338)
T cd05102         245 PESIFD  250 (338)
T ss_pred             cHHhhc
Confidence            998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=5.8e-30  Score=221.12  Aligned_cols=162  Identities=19%  Similarity=0.151  Sum_probs=128.0

Q ss_pred             CCceeeeeeecCCC-CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEG-GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+ ++.||+|.+....      ......+.+|+.+++.++||||+  .+++++.  .....|+||||+
T Consensus        78 G~~g~vy~a~~~~~~~~~vv~K~~~~~~------~~~~~~~~~E~~~l~~l~Hpniv--~~~~~~~--~~~~~~lv~E~~  147 (478)
T PTZ00267         78 NPTTAAFVATRGSDPKEKVVAKFVMLND------ERQAAYARSELHCLAACDHFGIV--KHFDDFK--SDDKLLLIMEYG  147 (478)
T ss_pred             CCCcEEEEEEEcCCCCeEEEEEEcccCC------HHHHHHHHHHHHHHHhCCCCCEe--EEEEEEE--ECCEEEEEEECC
Confidence            99999999998877 7899999764321      11223557899999999999997  4555444  335689999999


Q ss_pred             eCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++|+|...+.. ......+++.++..++.|++.||.|||+++|+||||||+|||+    +..+.+||+|||+++.+... 
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL----MPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE----CCCCcEEEEeCcCceecCCcc
Confidence            99997654332 1123357888888999999999999999999999999999999    77889999999999877543 


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         .....+||+.|+|||++.+
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~  245 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWER  245 (478)
T ss_pred             ccccccccCCCccccCHhHhCC
Confidence               2345679999999999865

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.96  E-value=3e-30  Score=215.08  Aligned_cols=160  Identities=26%  Similarity=0.373  Sum_probs=125.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||+|.+......    ......+.+|+.+++.++||||+.  +++.+..    ......++||
T Consensus        28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~--~~~~~~~~~~~~~~~~~~lv~  101 (355)
T cd07874          28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQN----QTHAKRAYRELVLMKCVNHKNIIS--LLNVFTPQKSLEEFQDVYLVM  101 (355)
T ss_pred             cCCEEEEEEEecCCCceEEEEEeCCcccC----hHHHHHHHHHHHHHHHhCCCchhc--eeeeeeccccccccceeEEEh
Confidence            99999999999999999999998753221    112235578999999999999984  3333321    1223468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++....+..      .+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       102 e~~~~~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill----~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874         102 ELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             hhhcccHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----CCCCCEEEeeCcccccCCC
Confidence            9998865444322      37777788999999999999999999999999999999    7788999999999987654


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......||+.|+|||++.+
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~  192 (355)
T cd07874         172 SFMMTPYVVTRYYRAPEVILG  192 (355)
T ss_pred             ccccCCccccCCccCHHHHcC
Confidence            3 3345689999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=9.6e-30  Score=211.06  Aligned_cols=160  Identities=24%  Similarity=0.363  Sum_probs=126.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||+|.+......    ......+.+|+.+++.++||||+  .+++++...    .....|++|
T Consensus        26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~~~~~   99 (343)
T cd07878          26 GAYGSVCSAYDTRLRQKVAVKKLSRPFQS----LIHARRTYRELRLLKHMKHENVI--GLLDVFTPATSIENFNEVYLVT   99 (343)
T ss_pred             CCCeEEEEEEECCCCCEEEEEEeCchhhh----hHHHHHHHHHHHHHHhcCCCchh--hhhhhhcccccccccCcEEEEe
Confidence            89999999999999999999998764322    12233457899999999999997  444444321    123468899


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +++ ++++..+...    ..+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++....
T Consensus       100 ~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~----~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878         100 NLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV----NEDCELRILDFGLARQADD  170 (343)
T ss_pred             ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE----CCCCCEEEcCCccceecCC
Confidence            987 4555544432    358888999999999999999999999999999999999    7788999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....||+.|+|||++.+
T Consensus       171 ~-~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         171 E-MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             C-cCCccccccccCchHhcC
Confidence            3 345689999999999865

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0664|consensus

Probab=99.96  E-value=2.8e-30  Score=199.27  Aligned_cols=163  Identities=25%  Similarity=0.348  Sum_probs=132.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc---cccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV---KASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~---~~~~lv~e  129 (229)
                      |.||.||..+|..+|+.||+|.+..-+-+    ....+++.+|+..|+.++|.|++  ...+.....+.   ..+|+++|
T Consensus        64 GAFGVVWsVTDPRdgrrvalkK~pnvfq~----L~s~krvFre~kmLcfFkHdNVL--SaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   64 GAFGVVWSVTDPRSGKRVALKKMPNVFQN----LASCKRVFREIKMLSSFRHDNVL--SLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             cceeEEEeccCCCCccchhHhhcchHHHH----HHHHHHHHHHHHHHHhhccccHH--HHHHhcCCCCchHHHHHHHHHH
Confidence            99999999999999999999998764432    33445779999999999999986  34443332221   24688999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      .+....-+.+..    .+.++...+.-+++||++||+|||+.+|+||||||+|.|+    +++..+||||||+++..+.+
T Consensus       138 LmQSDLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV----NSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  138 LMQSDLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV----NSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHhhhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe----ccCceEEecccccccccchh
Confidence            987765444433    4679999999999999999999999999999999999999    99999999999999987654


Q ss_pred             ---cccceeecccCCCCccccCC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~~  229 (229)
                         .++..+-|..|+|||+|+|.
T Consensus       210 ~~~hMTqEVVTQYYRAPEiLMGa  232 (449)
T KOG0664|consen  210 DRLNMTHEVVTQYYRAPELLMGA  232 (449)
T ss_pred             hhhhhHHHHHHHHhccHHHhhcc
Confidence               34556788999999999873

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=7.5e-30  Score=220.98  Aligned_cols=168  Identities=21%  Similarity=0.210  Sum_probs=129.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|++..+|+.||||++......    ......+.+|+..+..++|+|++..+-......    .....+++||
T Consensus        43 G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~----~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~  118 (496)
T PTZ00283         43 GATGTVLCAKRVSDGEPFAVKVVDMEGMS----EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVL  118 (496)
T ss_pred             CCCEEEEEEEEcCCCCEEEEEEEecccCC----HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEE
Confidence            99999999999999999999998654222    112335678999999999999985332111111    1112357999


Q ss_pred             eeeeCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||+++|+|...+.. ......+++.++..++.|++.||.|||+.+|+||||||+|||+    +.++.+||+|||+++.+.
T Consensus       119 Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl----~~~~~vkL~DFGls~~~~  194 (496)
T PTZ00283        119 DYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL----CSNGLVKLGDFGFSKMYA  194 (496)
T ss_pred             eCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----eCCCCEEEEecccCeecc
Confidence            99999997665443 1223458888889999999999999999999999999999999    777899999999998764


Q ss_pred             cc----cccceeecccCCCCccccC
Q psy11822        208 KA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..    .....+||+.|+|||++.+
T Consensus       195 ~~~~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        195 ATVSDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             ccccccccccccCCcceeCHHHhCC
Confidence            32    2345789999999999865

>KOG0666|consensus

Probab=99.96  E-value=5.1e-31  Score=206.23  Aligned_cols=170  Identities=22%  Similarity=0.227  Sum_probs=131.1

Q ss_pred             CCceeeeeeecCCCC----cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGG----ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|....+.    ..+|||.++.+.....-    -....|||-+++.++|||++  .++..+-.. +..+++++
T Consensus        35 GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi----S~SAcREiaL~REl~h~nvi--~Lv~Vfl~~-d~~v~l~f  107 (438)
T KOG0666|consen   35 GTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI----SMSACREIALLRELKHPNVI--SLVKVFLSH-DKKVWLLF  107 (438)
T ss_pred             cccceeeEeeeccCCcccchhhHHHHHhccCCCCCc----CHHHHHHHHHHHHhcCCcch--hHHHHHhcc-CceEEEEe
Confidence            999999999654432    37999998864221111    12348899999999999997  344444332 56789999


Q ss_pred             eeeeCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||.+...+..+... .....-++..-+.+|++||+.|+.|||++=|+||||||.|||+.-+..+.|.|||+|||+++.+.
T Consensus       108 dYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~  187 (438)
T KOG0666|consen  108 DYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFN  187 (438)
T ss_pred             hhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhh
Confidence            99999886554332 12224577777899999999999999999999999999999997665667999999999999986


Q ss_pred             cc-----cccceeecccCCCCccccCC
Q psy11822        208 KA-----VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~-----~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .+     .....+-|.+|+|||+|+|.
T Consensus       188 ~plkpl~s~d~VVVTiWYRAPELLLGa  214 (438)
T KOG0666|consen  188 NPLKPLASLDPVVVTIWYRAPELLLGA  214 (438)
T ss_pred             ccccccccCCceEEEEEecChHHhccc
Confidence            64     33567899999999999873

>KOG0574|consensus

Probab=99.96  E-value=3e-31  Score=207.02  Aligned_cols=157  Identities=22%  Similarity=0.262  Sum_probs=133.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.++++|+.+|||.++.+.        .++.+..||.+|.++..++++.+.    ........+|+|||||.
T Consensus        44 GSYGSV~KAIH~EsG~v~AIK~VPV~s--------DLQEIIKEISIMQQC~S~yVVKYY----GSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   44 GSYGSVHKAIHRESGHVLAIKKVPVDT--------DLQEIIKEISIMQQCKSKYVVKYY----GSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             CcchHHHHHHHhccCcEEEEEecCccc--------hHHHHHHHHHHHHHcCCchhhhhh----hhhccCCceEeehhhcC
Confidence            899999999999999999999987642        234568999999999999887422    22223345899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      -|+...+++..  .++|++.++..+++..+.||.|||...-||||||.+|||+    +.+|..||+|||.|..+.+.  .
T Consensus       112 AGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL----NT~G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  112 AGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL----NTDGIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             CCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE----cccchhhhhhccccchhhhhHHh
Confidence            99966665542  3579999999999999999999999999999999999999    99999999999999988765  5


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .++..|||-|||||++.
T Consensus       186 RNTVIGTPFWMAPEVI~  202 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIE  202 (502)
T ss_pred             hCccccCcccccHHHHH
Confidence            57899999999999874

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=9.7e-30  Score=205.11  Aligned_cols=165  Identities=17%  Similarity=0.158  Sum_probs=128.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||++.+..+|+.||+|.+.......   ......+..|+.+++.++||||+.  +.+.+.  +....++||||+
T Consensus         3 ~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~~~~~~~~~E~~il~~l~hp~i~~--~~~~~~--~~~~~~lv~e~~   75 (277)
T cd05607           3 KGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---KSGEKMALLEKEILEKVNSPFIVN--LAYAFE--SKTHLCLVMSLM   75 (277)
T ss_pred             CCCceEEEEEEEccCCcEEEEEEEcHHHhhc---chhhHHHHHHHHHHHhcCCCcEEE--EEEEEe--cCCeEEEEEecC
Confidence            4899999999999999999999987643221   111223456899999999999974  333333  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      +++++........ ...+++..+..++.|++.||+|||+.||+||||||+||++    +.++.++|+|||++...... .
T Consensus        76 ~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~~l~Dfg~~~~~~~~~~  150 (277)
T cd05607          76 NGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL----DDQGNCRLSDLGLAVELKDGKT  150 (277)
T ss_pred             CCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE----cCCCCEEEeeceeeeecCCCce
Confidence            9999765543321 2246777778899999999999999999999999999999    77789999999999876543 2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       151 ~~~~~~~~~y~aPE~~~~  168 (277)
T cd05607         151 ITQRAGTNGYMAPEILKE  168 (277)
T ss_pred             eeccCCCCCccCHHHHcc
Confidence            234678999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0193|consensus

Probab=99.96  E-value=2.8e-30  Score=216.86  Aligned_cols=158  Identities=18%  Similarity=0.122  Sum_probs=128.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||+||+|+|.   -.||||+++.....    ..+.+.|++|+.++++-+|.||+  -+++++-  ++. ..||+.+|.
T Consensus       403 GsFGtV~Rg~wh---GdVAVK~Lnv~~pt----~~qlqaFKnEVa~lkkTRH~NIl--LFMG~~~--~p~-~AIiTqwCe  470 (678)
T KOG0193|consen  403 GSFGTVYRGRWH---GDVAVKLLNVDDPT----PEQLQAFKNEVAVLKKTRHENIL--LFMGACM--NPP-LAIITQWCE  470 (678)
T ss_pred             ccccceeecccc---cceEEEEEecCCCC----HHHHHHHHHHHHHHhhcchhhhe--eeehhhc--CCc-eeeeehhcc
Confidence            899999999997   45999998875433    22567899999999999999997  3555543  443 489999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC----c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS----K  208 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~----~  208 (229)
                      |.+|...+....  ..|..-..+.|+.||++|+.|||.++|||||||..|||+    .+++.|||+|||++..-.    .
T Consensus       471 GsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl----~~~~kVkIgDFGLatvk~~w~g~  544 (678)
T KOG0193|consen  471 GSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL----HEDLKVKIGDFGLATVKTRWSGE  544 (678)
T ss_pred             Cchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE----ccCCcEEEecccceeeeeeeccc
Confidence            999777766533  357777889999999999999999999999999999999    777899999999986542    2


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .......|...|||||+++-
T Consensus       545 ~q~~qp~gsilwmAPEvIRm  564 (678)
T KOG0193|consen  545 QQLEQPHGSLLWMAPEVIRM  564 (678)
T ss_pred             cccCCCccchhhhcHHHHhh
Confidence            23456678888999999863

>KOG1989|consensus

Probab=99.96  E-value=3.8e-30  Score=224.01  Aligned_cols=161  Identities=25%  Similarity=0.305  Sum_probs=125.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhh--h-h-ccc-ccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDY--A-H-CNN-VKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~--~-~-~~~-~~~~~l  126 (229)
                      |+|+.||+|.+...|..||+|.+-..      ....+..+.+||++|++|. |+|||  ..++.  . . ..+ ...++|
T Consensus        48 GGFa~VYla~~~~~~~~~AlKrm~~~------de~~L~~v~~EI~~MK~L~gh~nIV--~yidss~~~~~~~~~~~Evll  119 (738)
T KOG1989|consen   48 GGFAQVYLAQDVKGGKKYALKRMYVN------DEEALNAVKREIDIMKLLSGHKNIV--SYIDSSAINRSSNNGVWEVLL  119 (738)
T ss_pred             CCcEEEEEEEecCCCceeeeeeeecC------CHHHHHHHHHHHHHHHHhcCCCcee--eEeccccccccCCCceeEEEe
Confidence            99999999999888899999986543      1334556799999999995 99997  44441  1 1 222 356899


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      +||||.+|.|-++....... .|++.++++|+.++++|+.+||...  |||||||.+|||+    ..++.+||||||.|.
T Consensus       120 LmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl----s~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  120 LMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL----SADGNYKLCDFGSAT  194 (738)
T ss_pred             ehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE----cCCCCEEeCcccccc
Confidence            99999987754444433333 4999999999999999999999988  9999999999999    888899999999986


Q ss_pred             ecCcccc-----------cceeecccCCCCccc
Q psy11822        205 HVSKAVC-----------NTYLQSRYYRAPEII  226 (229)
Q Consensus       205 ~~~~~~~-----------~~~~gt~~y~aPE~l  226 (229)
                      .......           -...-|+.|+|||++
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI  227 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI  227 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHH
Confidence            5432210           123668899999987

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=1e-29  Score=210.10  Aligned_cols=163  Identities=16%  Similarity=0.142  Sum_probs=128.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||++++..+++.||+|++.+.....   ......+.+|+.++..++|+||+.  +...+.  +....++||||+
T Consensus        11 ~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~--~~~~~~--~~~~~~lv~ey~   83 (332)
T cd05623          11 RGAFGEVAVVKLKNADKVFAMKILNKWEMLK---RAETACFREERDVLVNGDNQWITT--LHYAFQ--DENNLYLVMDYY   83 (332)
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEeHHHHHH---hhHHHHHHHHHHHHhhCCCCCEee--EEEEEe--cCCEEEEEEecc
Confidence            3999999999999999999999987532221   222334678888999999999974  333333  335679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|+|..++...  ...+++..++.++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||++......  
T Consensus        84 ~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili----~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          84 VGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             CCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE----CCCCCEEEeecchheecccCCc
Confidence            999977665431  1357888889999999999999999999999999999999    77889999999999765332  


Q ss_pred             -cccceeecccCCCCcccc
Q psy11822        210 -VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~  227 (229)
                       .....+||+.|+|||++.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             ceecccccCccccCHHHHh
Confidence             223468999999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=7.1e-30  Score=211.20  Aligned_cols=160  Identities=21%  Similarity=0.281  Sum_probs=130.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|.+.....     ......+.+|+++++.++|+||+.  +++++.  .....++||||++
T Consensus        16 g~~g~V~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~e~~~   86 (333)
T cd06650          16 GNGGVVFKVSHKPSGLIMARKLIHLEIK-----PAIRNQIIRELQVLHECNSPYIVG--FYGAFY--SDGEISICMEHMD   86 (333)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeecccC-----HHHHHHHHHHHHHHHHCCCCcccc--eeEEEE--ECCEEEEEEecCC
Confidence            8999999999999999999998765321     112335689999999999999984  444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++|..++..   ...+++..+..++.|++.||.|||+. +|+||||||+|||+    +.++.+||+|||++..+.....
T Consensus        87 ~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~~~~~~~~~~  159 (333)
T cd06650          87 GGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  159 (333)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE----cCCCCEEEeeCCcchhhhhhcc
Confidence            9998777654   33577778889999999999999975 79999999999999    7778999999999987655444


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||..|+|||++.+
T Consensus       160 ~~~~~~~~y~aPE~~~~  176 (333)
T cd06650         160 NSFVGTRSYMSPERLQG  176 (333)
T ss_pred             ccCCCCccccCHHHhcC
Confidence            55689999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=2.5e-29  Score=206.15  Aligned_cols=167  Identities=20%  Similarity=0.207  Sum_probs=125.6

Q ss_pred             cCCceeeeeeecCC--CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLE--GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|++..  ++..||+|.+....        ....+.+|+.+++.++||||+.  +.+++.......+++|||
T Consensus        11 ~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--------~~~~~~~E~~~l~~l~h~niv~--~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867          11 RGTYGHVYKAKRKDGKDEKEYALKQIEGTG--------ISMSACREIALLRELKHPNVIA--LQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             cCCCeeEEEEEecCCCccceEEEEEecCCC--------CcHHHHHHHHHHHhCCCCCeee--EEEEEeccCCCeEEEEEe
Confidence            39999999998653  67899999876521        1224578999999999999974  444443334456799999


Q ss_pred             eeeCCCCCccCC-----CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        130 VTRRSQYTGATA-----PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       130 ~~~~~~l~~~~~-----~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      |+.++.+..+..     .......+++..+..++.|++.||.|||+.+|+||||||+|||+....+..+.+||+|||+++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence            998765333211     111123477777889999999999999999999999999999996554566799999999998


Q ss_pred             ecCcc-----cccceeecccCCCCccccC
Q psy11822        205 HVSKA-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....     ......||+.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcC
Confidence            76442     2235688999999999865

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=1.2e-29  Score=212.68  Aligned_cols=163  Identities=24%  Similarity=0.310  Sum_probs=127.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc---ccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN---VKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~---~~~~~lv~  128 (229)
                      .|+||.||+|.+..+|+.||+|.+......    ......+.+|+.+++.++|+||+  .+++++...+   ....|+||
T Consensus        10 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~~~~~~~~~~~~lv~   83 (372)
T cd07853          10 YGAFGVVWSVTDPRDGKRVALKKMPNVFQN----LVSCKRVFRELKMLCFFKHDNVL--SALDILQPPHIDPFEEIYVVT   83 (372)
T ss_pred             eCCCEEEEEEEECCCCCEEEEEeccccccc----hHHHHHHHHHHHHHHhCCCCCcC--CHhheecCCCccccceEEEEe
Confidence            499999999999899999999987653211    11233568899999999999997  4555544322   12578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.++.+..+..    ...+++..+..++.|++.||.|||+.||+||||||+|||+    +.++.+||+|||+++....
T Consensus        84 e~~~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili----~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          84 ELMQSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             eccccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE----CCCCCEEeccccceeeccc
Confidence            9998654443322    2458888899999999999999999999999999999999    7888999999999987643


Q ss_pred             c---cccceeecccCCCCccccC
Q psy11822        209 A---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      .   ......+|+.|+|||++.|
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         156 DESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             CccccCCCCCcCCCcCCHHHHcC
Confidence            2   2234578899999999865

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=1e-29  Score=212.57  Aligned_cols=160  Identities=26%  Similarity=0.364  Sum_probs=125.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||||++......    ......+.+|+.+++.++||||+.  +++.+..    .....+|+||
T Consensus        35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~ii~--~~~~~~~~~~~~~~~~~~lv~  108 (364)
T cd07875          35 GAQGIVCAAYDAILERNVAIKKLSRPFQN----QTHAKRAYRELVLMKCVNHKNIIG--LLNVFTPQKSLEEFQDVYIVM  108 (364)
T ss_pred             CCCeEEEEEEECCCCcEEEEEEeCccccC----chhHHHHHHHHHHHHhcCCCCccc--cceeecccccccccCeEEEEE
Confidence            99999999999999999999998753221    112235578999999999999973  3333321    1223579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++....+..      .+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       109 e~~~~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         109 ELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             eCCCCCHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE----CCCCcEEEEeCCCccccCC
Confidence            9998765444322      36777788899999999999999999999999999999    7788999999999987654


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......||+.|+|||++.+
T Consensus       179 ~~~~~~~~~t~~y~aPE~~~~  199 (364)
T cd07875         179 SFMMTPYVVTRYYRAPEVILG  199 (364)
T ss_pred             CCcccCCcccCCcCCHHHHhC
Confidence            3 2345688999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0612|consensus

Probab=99.96  E-value=5.1e-30  Score=227.53  Aligned_cols=162  Identities=17%  Similarity=0.178  Sum_probs=133.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.|.+++++.|++.||+|++.+-..-   +...-..|..|-.+|..-+.+.|+.  +...+.  +..++|+||||++
T Consensus        86 GaFGEV~lVr~k~t~~VYAMK~lnK~eMl---Kr~~tA~F~EERDimv~~ns~Wiv~--LhyAFQ--D~~~LYlVMdY~p  158 (1317)
T KOG0612|consen   86 GAFGEVALVRHKSTEKVYAMKILNKWEML---KRAETACFREERDIMVFGNSEWIVQ--LHYAFQ--DERYLYLVMDYMP  158 (1317)
T ss_pred             cccceeEEEEeeccccchhHHHhhHHHHh---hchhHHHHHHHhHHHHcCCcHHHHH--HHHHhc--CccceEEEEeccc
Confidence            99999999999999999999998873221   1112336778888888777887763  333333  4567899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ||+|-.+..+   ..++++..++.++..|+-||.-+|+.|+|||||||+|||+    +..|++||+|||.+..+..+   
T Consensus       159 GGDlltLlSk---~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl----d~~GHikLADFGsClkm~~dG~V  231 (1317)
T KOG0612|consen  159 GGDLLTLLSK---FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL----DKSGHIKLADFGSCLKMDADGTV  231 (1317)
T ss_pred             CchHHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe----cccCcEeeccchhHHhcCCCCcE
Confidence            9997766666   3469999999999999999999999999999999999999    99999999999999888643   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+|||.|.|||+|..
T Consensus       232 ~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  232 RSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             EeccccCCCCccCHHHHHh
Confidence            4467899999999999864

>KOG0579|consensus

Probab=99.95  E-value=4e-30  Score=217.26  Aligned_cols=159  Identities=21%  Similarity=0.265  Sum_probs=132.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|..+.++..-|-|++....      ...++.+.-||.+|..+.||+|+  .+++.+...  +.+|++.|||.
T Consensus        43 GAFGKVyKA~nket~~lAAaKvIetks------eEELEDylVEIeILa~CdHP~iv--kLl~ayy~e--nkLwiliEFC~  112 (1187)
T KOG0579|consen   43 GAFGKVYKAVNKETKLLAAAKVIETKS------EEELEDYLVEIEILAECDHPVIV--KLLSAYYFE--NKLWILIEFCG  112 (1187)
T ss_pred             ccchhhhhhhcccchhhhhhhhhcccc------hhHHhhhhhhhhhhhcCCChHHH--HHHHHHhcc--CceEEEEeecC
Confidence            789999999999999999999887532      33455678999999999999998  444444332  34799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ||-.+.+.-..  ...|++.++.-+++|++.||.|||+++|||||||.+|||+    +.+|.++|+|||.+......  .
T Consensus       113 GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~----TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  113 GGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL----TLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             CchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE----EecCcEeeecccccccchhHHhh
Confidence            99966654432  3469999999999999999999999999999999999999    88889999999988766443  4


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      ..++.|||+|||||+++
T Consensus       187 RDsFIGTPYWMAPEVvm  203 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVM  203 (1187)
T ss_pred             hccccCCcccccchhee
Confidence            46789999999999975

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=1.6e-29  Score=206.31  Aligned_cols=163  Identities=16%  Similarity=0.160  Sum_probs=121.8

Q ss_pred             CCceeeeeeecCC----------------CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLE----------------GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |+||.||+|.+..                ++..||+|++.....     ......+.+|+.++.+++||||+  .+++++
T Consensus        16 G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~   88 (304)
T cd05096          16 GQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-----KNARNDFLKEVKILSRLKDPNII--RLLGVC   88 (304)
T ss_pred             cCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-----HHHHHHHHHHHHHHhhcCCCCee--EEEEEE
Confidence            9999999997532                345799998865311     11234568899999999999997  444444


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCC----------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCC
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPP----------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKP  180 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~----------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp  180 (229)
                      .  +....++||||++++++..++....                ....+++.++..++.|++.||.|||+.||+||||||
T Consensus        89 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp  166 (304)
T cd05096          89 V--DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLAT  166 (304)
T ss_pred             e--cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcch
Confidence            3  2345799999999998765543211                112355566788999999999999999999999999


Q ss_pred             CCeeeeCCCCCCccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        181 ENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       181 ~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +|||+    +.++.+||+|||+++.+....    .....++..|+|||++.+
T Consensus       167 ~Nill----~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (304)
T cd05096         167 RNCLV----GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM  214 (304)
T ss_pred             hheEE----cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc
Confidence            99999    777899999999998764432    123455778999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=4.1e-29  Score=202.25  Aligned_cols=168  Identities=18%  Similarity=0.130  Sum_probs=131.1

Q ss_pred             ecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         49 FNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      ..+.|+||.||+|.+..+++.||+|.+.......   ......+.+|+.+++.++|+|++.  +.+.+.  .....+++|
T Consensus         7 ~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~i~~--~~~~~~--~~~~~~lv~   79 (285)
T cd05632           7 VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK---RKGESMALNEKQILEKVNSQFVVN--LAYAYE--TKDALCLVL   79 (285)
T ss_pred             EEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh---hhHHHHHHHHHHHHHHcCCcCcee--EEEEEe--cCCEEEEEE
Confidence            3345999999999999999999999987643221   122234578999999999999974  333332  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++........ ...+++..+..++.|++.||.|||+.||+||||||+||++    +.++.++|+|||++.....
T Consensus        80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili----~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05632          80 TIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL----DDYGHIRISDLGLAVKIPE  154 (285)
T ss_pred             EeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----CCCCCEEEecCCcceecCC
Confidence            9999998765543321 2358888999999999999999999999999999999999    7778999999999976643


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......|+..|+|||++.+
T Consensus       155 ~~~~~~~~g~~~~~aPE~~~~  175 (285)
T cd05632         155 GESIRGRVGTVGYMAPEVLNN  175 (285)
T ss_pred             CCcccCCCCCcCccChHHhcC
Confidence            3 2245678999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=2.7e-29  Score=203.23  Aligned_cols=163  Identities=10%  Similarity=0.092  Sum_probs=130.8

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--ccccccceee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--NNVKASVQMM  128 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~~~~~~lv~  128 (229)
                      ..|++|.||+|.+  +|+.||+|.++.....   .....+.+.+|+.+|++++||||+  .+++++..  ......++||
T Consensus        29 ~~g~~~~v~~~~~--~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv--~~~g~~~~~~~~~~~~~lv~  101 (283)
T PHA02988         29 KENDQNSIYKGIF--NNKEVIIRTFKKFHKG---HKVLIDITENEIKNLRRIDSNNIL--KIYGFIIDIVDDLPRLSLIL  101 (283)
T ss_pred             eeCCceEEEEEEE--CCEEEEEEeccccccc---cHHHHHHHHHHHHHHHhcCCCCEE--EEeeeEEecccCCCceEEEE
Confidence            3489999999997  5899999998764221   122245678999999999999998  45544433  2334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||+++|+|..++..   ...+++..+..++.|++.||.|||+ .+++||||||+||++    +.++.+||+|||+++...
T Consensus       102 Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill----~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988        102 EYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV----TENYKLKIICHGLEKILS  174 (283)
T ss_pred             EeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE----CCCCcEEEcccchHhhhc
Confidence            99999998887765   3468888889999999999999998 489999999999999    778899999999998765


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... ....|++.|+|||++.+
T Consensus       175 ~~~-~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        175 SPP-FKNVNFMVYFSYKMLND  194 (283)
T ss_pred             ccc-ccccCcccccCHHHhhh
Confidence            433 34678899999999864

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=2.2e-29  Score=206.00  Aligned_cols=160  Identities=22%  Similarity=0.244  Sum_probs=124.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|.++....     ......+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        17 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   87 (309)
T cd07872          17 GTYATVFKGRSKLTENLVALKEIRLEHE-----EGAPCTAIREVSLLKDLKHANIV--TLHDIVH--TDKSLTLVFEYLD   87 (309)
T ss_pred             cCCEEEEEEEecCCCCeEEEEEeecccc-----CCcchhHHHHHHHHHhCCCCCcc--eEEEEEe--eCCeEEEEEeCCC
Confidence            8999999999999999999998865321     11222457899999999999997  4444443  3345799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++.+..+...   ...+++..+..++.|++.||.|||++||+||||||+||++    +..+.+||+|||++......  .
T Consensus        88 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~~~~  160 (309)
T cd07872          88 KDLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKSVPTKT  160 (309)
T ss_pred             CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECccccceecCCCccc
Confidence            7544333222   2347777888899999999999999999999999999999    77889999999999765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+|+.|+|||++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~  178 (309)
T cd07872         161 YSNEVVTLWYRPPDVLLG  178 (309)
T ss_pred             cccccccccccCCHHHhC
Confidence            344678999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0604|consensus

Probab=99.95  E-value=1.2e-29  Score=197.53  Aligned_cols=160  Identities=21%  Similarity=0.240  Sum_probs=128.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhh--cccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAH--CNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~--~~~~~~~~lv~  128 (229)
                      .|--|.|-.|.++.|++++|+|++...       .    ...+|++..-.. .||||+  .+++.++  .....-+.+||
T Consensus        72 ~GinGkV~~C~~k~T~ekfALKvL~Ds-------~----KARrEVeLHw~~s~h~~iV--~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   72 AGINGKVVQCVHKRTQEKFALKVLLDS-------P----KARREVELHWMASGHPHIV--SIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             cccCCceEEEEeccchhhhHHHHHhcC-------H----HHHhHhhhhhhhcCCCceE--EeehhhhhhccCceeeEeee
Confidence            377899999999999999999997643       1    226777776444 799998  5555553  22334457799


Q ss_pred             eeeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |.++||. +.++... . .+.+++.++..|+.||+.|++|||+.+|.||||||+|+|.+.. ..+..+||+|||+|+...
T Consensus       139 E~meGGeLfsriq~~-g-~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t-~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDR-G-DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT-SPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             ecccchHHHHHHHHc-c-cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC-CCCcceEecccccccccC
Confidence            9999999 4444333 2 3469999999999999999999999999999999999999776 556799999999999886


Q ss_pred             c-ccccceeecccCCCCcccc
Q psy11822        208 K-AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~-~~~~~~~gt~~y~aPE~l~  227 (229)
                      . ....+.|-||.|.|||++.
T Consensus       216 ~~~~L~TPc~TPyYvaPevlg  236 (400)
T KOG0604|consen  216 EPGDLMTPCFTPYYVAPEVLG  236 (400)
T ss_pred             CCccccCCcccccccCHHHhC
Confidence            4 4667899999999999985

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=3e-29  Score=214.71  Aligned_cols=153  Identities=23%  Similarity=0.209  Sum_probs=122.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|....            ..+.+|++++++++|+||+.  +++++.  .....++|||++.
T Consensus       180 G~~G~Vy~a~~~~~~~~vavK~~~~------------~~~~~E~~iL~~L~HpnIv~--l~~~~~--~~~~~~lv~e~~~  243 (461)
T PHA03211        180 GSEGCVFESSHPDYPQRVVVKAGWY------------ASSVHEARLLRRLSHPAVLA--LLDVRV--VGGLTCLVLPKYR  243 (461)
T ss_pred             CCCeEEEEEEECCCCCEEEEecccc------------cCHHHHHHHHHHCCCCCCCc--EEEEEE--ECCEEEEEEEccC
Confidence            8999999999999999999996322            13367999999999999984  444433  3345689999997


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +..+..+...   ...+++.+++.++.|++.||.|||++||+||||||+|||+    +..+.+||+|||+++.....   
T Consensus       244 ~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl----~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        244 SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV----NGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE----CCCCCEEEcccCCceeccccccc
Confidence            5544444332   2358888999999999999999999999999999999999    77789999999999876432   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             ccccccCCCcCCcCHHHHcC
Confidence             1234679999999999865

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=3.4e-29  Score=208.96  Aligned_cols=153  Identities=21%  Similarity=0.170  Sum_probs=123.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+....            ....|+.+++.++||||+  .+++++.  .....++|||++.
T Consensus        77 G~~g~Vy~~~~~~~~~~valK~~~~~------------~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  140 (357)
T PHA03209         77 GSEGRVFVATKPGQPDPVVLKIGQKG------------TTLIEAMLLQNVNHPSVI--RMKDTLV--SGAITCMVLPHYS  140 (357)
T ss_pred             CCCeEEEEEEECCCCceEEEEeCCcc------------ccHHHHHHHHhCCCCCCc--ChhheEE--eCCeeEEEEEccC
Confidence            89999999999989999999975432            225688899999999997  4555544  3345789999997


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +..+..+...   ...+++.++..++.||+.||.|||++||+||||||+|||+    +..+.+||+|||+++..... ..
T Consensus       141 ~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~~  213 (357)
T PHA03209        141 SDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI----NDVDQVCIGDLGAAQFPVVAPAF  213 (357)
T ss_pred             CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEecCccccccccCccc
Confidence            6555444332   3458888999999999999999999999999999999999    77889999999999754332 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       214 ~~~~gt~~y~aPE~~~~  230 (357)
T PHA03209        214 LGLAGTVETNAPEVLAR  230 (357)
T ss_pred             ccccccccccCCeecCC
Confidence            45679999999999865

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=3e-29  Score=225.42  Aligned_cols=165  Identities=19%  Similarity=0.202  Sum_probs=126.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|+++.....   .....+++.+|+++++.++||||+  .+++++.  +....+++|||++
T Consensus        13 GgfG~VYlA~d~~tg~~VAIK~I~~~l~~---~e~~~~rflrEi~ILs~L~HPNIV--kl~~v~~--d~~~lyLVMEY~e   85 (932)
T PRK13184         13 GGMGEVYLAYDPVCSRRVALKKIREDLSE---NPLLKKRFLREAKIAADLIHPGIV--PVYSICS--DGDPVYYTMPYIE   85 (932)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEECccccc---CHHHHHHHHHHHHHHHhCCCcCcC--eEEEEEe--eCCEEEEEEEcCC
Confidence            99999999999999999999998753211   112234678899999999999998  4444433  3345799999999


Q ss_pred             CCCCCccCCCCCC--------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        133 RSQYTGATAPPPP--------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       133 ~~~l~~~~~~~~~--------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      ++++..++.....        ...++...+..++.|+++||+|||++||+||||||+||++    +..+.++|+|||+++
T Consensus        86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL----d~dg~vKLiDFGLAk  161 (932)
T PRK13184         86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL----GLFGEVVILDWGAAI  161 (932)
T ss_pred             CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE----cCCCCEEEEecCcce
Confidence            9997665432110        1123444567889999999999999999999999999999    778899999999998


Q ss_pred             ecCcc--------------------cccceeecccCCCCccccC
Q psy11822        205 HVSKA--------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~--------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....                    .....+||+.|||||++.+
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence            66210                    0123579999999999875

>KOG1152|consensus

Probab=99.95  E-value=6.1e-29  Score=207.87  Aligned_cols=172  Identities=23%  Similarity=0.262  Sum_probs=142.5

Q ss_pred             eeeccc--CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhh--hhhhhcccccccccc---Cccccceehhhhhhcc
Q psy11822         47 YIFNCL--DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLT--MDQVERRITPGEALN---HAFVTLAHLVDYAHCN  119 (229)
Q Consensus        47 ~~~~~~--g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~--~~~~~~Ei~~l~~l~---h~ni~~~~~~~~~~~~  119 (229)
                      -+.+.+  |.||.|++|.++.+...|+||.+.++..-...++..  +-.+-.||.+|..++   |+||+  .++++++  
T Consensus       564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIl--KlLdfFE--  639 (772)
T KOG1152|consen  564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENIL--KLLDFFE--  639 (772)
T ss_pred             eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchh--hhhheee--
Confidence            334444  889999999999999999999998865543333322  234677999999997   99997  6888887  


Q ss_pred             cccccceeeeeeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        120 NVKASVQMMEVTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       120 ~~~~~~lv~e~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                      +...+|++||....|- |-.++..   ...+++.++..|+.||+.|+++||+.||||||||-+|+.+    +.+|-+||+
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv----d~~g~~kli  712 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV----DSNGFVKLI  712 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhccccccccCceecccccccEEE----ecCCeEEEe
Confidence            4456799999977664 3333343   3569999999999999999999999999999999999999    999999999


Q ss_pred             ecCcceecCcccccceeecccCCCCccccCC
Q psy11822        199 DFGSASHVSKAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       199 DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      |||.|....++.....+||..|.|||+|.|+
T Consensus       713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~  743 (772)
T KOG1152|consen  713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGE  743 (772)
T ss_pred             eccchhhhcCCCcceeeeeccccchhhhCCC
Confidence            9999998888777889999999999999985

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=8.5e-29  Score=200.76  Aligned_cols=161  Identities=24%  Similarity=0.277  Sum_probs=132.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|+++.....   .....+.+.+|+++++.+.||||+  .+++++.  .....++||||++
T Consensus        12 g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~~   84 (290)
T cd05580          12 GSFGRVMLVRHKGSGKYYALKILSKAKIV---KLKQVEHVLNEKRILQSIRHPFLV--NLYGSFQ--DDSNLYLVMEYVP   84 (290)
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEEEHHHhh---hhhHHHHHHHHHHHHHhCCCCCcc--ceeeEEE--cCCeEEEEEecCC
Confidence            89999999999999999999998764322   123345678999999999999997  4444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++..++..   ...+++..+..++.|++.||.|||++|++|+||+|+||++    +.++.+||+|||++...... ..
T Consensus        85 ~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~~-~~  156 (290)
T cd05580          85 GGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL----DSDGYIKITDFGFAKRVKGR-TY  156 (290)
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEeeCCCccccCCC-CC
Confidence            9997766555   2468888889999999999999999999999999999999    77789999999999877554 34


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...|++.|+|||++.+
T Consensus       157 ~~~~~~~y~aPE~~~~  172 (290)
T cd05580         157 TLCGTPEYLAPEIILS  172 (290)
T ss_pred             CCCCCccccChhhhcC
Confidence            5678999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=2.9e-29  Score=203.31  Aligned_cols=164  Identities=24%  Similarity=0.294  Sum_probs=118.5

Q ss_pred             CCceeeeeeecCC-CCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc---ccCccccceehhhhhh---cccccccc
Q psy11822         53 DDIGQVNVPTDLE-GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA---LNHAFVTLAHLVDYAH---CNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~---l~h~ni~~~~~~~~~~---~~~~~~~~  125 (229)
                      |+||.||+|++.. ++..||+|.++......    .....+.+|+.+++.   +.||||+.  +++++.   .......+
T Consensus        12 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~~~~hpniv~--~~~~~~~~~~~~~~~~~   85 (290)
T cd07862          12 GAYGKVFKARDLKNGGRFVALKRVRVQTGEE----GMPLSTIREVAVLRHLETFEHPNVVR--LFDVCTVSRTDRETKLT   85 (290)
T ss_pred             CCCeEEEEEEEcCCCCeEEEEEEEecccCCC----CchHHHHHHHHHHHhhcccCCCCcce--EEEEEecccCCCCCcEE
Confidence            9999999999854 57899999876532111    111123445555544   57999984  333332   12234578


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +||||++++. ..+..... ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.
T Consensus        86 lv~e~~~~~l-~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~----~~~~~~kl~Dfg~~~~  159 (290)
T cd07862          86 LVFEHVDQDL-TTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARI  159 (290)
T ss_pred             EEEccCCCCH-HHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----cCCCCEEEccccceEe
Confidence            9999998643 33322211 2347888889999999999999999999999999999999    7788999999999987


Q ss_pred             cCcc-cccceeecccCCCCccccC
Q psy11822        206 VSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .... ......||+.|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~  183 (290)
T cd07862         160 YSFQMALTSVVVTLWYRAPEVLLQ  183 (290)
T ss_pred             ccCCcccccccccccccChHHHhC
Confidence            6543 3345689999999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG2052|consensus

Probab=99.95  E-value=3.5e-29  Score=203.67  Aligned_cols=159  Identities=18%  Similarity=0.136  Sum_probs=122.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||+||+|.++  |+.||||++....  +..+.    + +.||..-..|+|+||+-.-..+....+.-..+|+|++|.+
T Consensus       222 GRyGEVwrG~wr--Ge~VAVKiF~srd--E~SWf----r-EtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe  292 (513)
T KOG2052|consen  222 GRFGEVWRGRWR--GEDVAVKIFSSRD--ERSWF----R-ETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHE  292 (513)
T ss_pred             ccccceeecccc--CCceEEEEecccc--hhhhh----h-HHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeeccc
Confidence            899999999998  9999999986531  11111    0 3445445567999997222222222233356899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH--------CCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ--------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~--------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      .|+|.+++..    ..++.....+++..+++||++||.        -.|.|||||+.|||+    ..++.+.|+|+|||.
T Consensus       293 ~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV----Kkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  293 HGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAV  364 (513)
T ss_pred             CCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE----ccCCcEEEeeceeeE
Confidence            9997666665    468888899999999999999994        249999999999999    888999999999998


Q ss_pred             ecCcc------cccceeecccCCCCccccC
Q psy11822        205 HVSKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+..      ..+..+||..|||||+|-.
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLde  394 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDE  394 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChHHhhh
Confidence            77543      3366799999999999853

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=6.4e-29  Score=201.14  Aligned_cols=167  Identities=19%  Similarity=0.150  Sum_probs=130.4

Q ss_pred             cccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         50 NCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .+.|+||.||+|.+..+++.||+|.+.......   ......+.+|+.+++.++|+|++.  ..+.+.  .....++|||
T Consensus         8 ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~i~~--~~~~~~--~~~~~~lv~e   80 (285)
T cd05630           8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---RKGESMALNEKQILEKVNSRFVVS--LAYAYE--TKDALCLVLT   80 (285)
T ss_pred             eecCCCeEEEEEEEcCCCceEEEEEEehhhccc---hHHHHHHHHHHHHHHhCCCCCeee--eeEEEe--cCCEEEEEEE
Confidence            344999999999999999999999887642221   112234577999999999999973  333333  3345799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++...+.... ...+++.++..++.|++.||.|||+.+|+||||||+||++    +..+.++|+|||++......
T Consensus        81 ~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          81 LMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             ecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE----CCCCCEEEeeccceeecCCC
Confidence            999999866653322 2347888889999999999999999999999999999999    77789999999999876543


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|+..|+|||++.+
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             ccccCCCCCccccChHHHcC
Confidence             2234578999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG4721|consensus

Probab=99.95  E-value=1.6e-29  Score=211.29  Aligned_cols=151  Identities=23%  Similarity=0.250  Sum_probs=126.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.-|.||+|+..  ++.||||.++...             ..+|+-|++|+||||+.+.-+    |....-++||||||.
T Consensus       135 GaQGAVF~Grl~--netVAVKKV~elk-------------ETdIKHLRkLkH~NII~FkGV----CtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  135 GAQGAVFLGRLH--NETVAVKKVRELK-------------ETDIKHLRKLKHPNIITFKGV----CTQSPCYCIIMEFCA  195 (904)
T ss_pred             Ccccceeeeecc--CceehhHHHhhhh-------------hhhHHHHHhccCcceeeEeee----ecCCceeEEeeeccc
Confidence            778999999976  8999999876521             456778899999999744322    445555789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      .|.|...+..   .+.++......|..+|+.|+.|||.+.|||||||.-||||+.    +-.|||+|||.++....- ..
T Consensus       196 ~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~----~d~VKIsDFGTS~e~~~~STk  268 (904)
T KOG4721|consen  196 QGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY----DDVVKISDFGTSKELSDKSTK  268 (904)
T ss_pred             cccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec----cceEEeccccchHhhhhhhhh
Confidence            9998888776   567888888999999999999999999999999999999944    449999999999987653 34


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ..++||..|||||+++++
T Consensus       269 MSFaGTVaWMAPEvIrne  286 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNE  286 (904)
T ss_pred             hhhhhhHhhhCHHHhhcC
Confidence            578999999999999874

>KOG1151|consensus

Probab=99.95  E-value=4.3e-29  Score=203.72  Aligned_cols=166  Identities=21%  Similarity=0.306  Sum_probs=138.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhh--HHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADR--REFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+|++||+|.|....+.||+|+-.  +...+ ..+........+|-++.+.|.||.|+  .+++|+...+ ..++-|+||
T Consensus       474 GGFSEVyKAFDl~EqRYvAvKIHqlNK~Wrd-EKKeNYhKHAcREyrIHKeLDHpRIV--KlYDyfslDt-dsFCTVLEY  549 (775)
T KOG1151|consen  474 GGFSEVYKAFDLTEQRYVAVKIHQLNKNWRD-EKKENYHKHACREYRIHKELDHPRIV--KLYDYFSLDT-DSFCTVLEY  549 (775)
T ss_pred             ccHHHHHHhcccchhheeeEeeehhccchhh-HhhhhHHHHHHHHHhhhhccCcceee--eeeeeeeecc-ccceeeeee
Confidence            999999999999999999999743  33222 22233455678999999999999997  6777775444 347889999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC--CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL--GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~--~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |+|++|+.++..   ...+++.+++.|+.||+.||.||...  -|||-||||.|||+... +..|.+||.|||+++++++
T Consensus       550 ceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G-tacGeIKITDFGLSKIMdd  625 (775)
T KOG1151|consen  550 CEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG-TACGEIKITDFGLSKIMDD  625 (775)
T ss_pred             cCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC-cccceeEeeecchhhhccC
Confidence            999999999887   56799999999999999999999975  49999999999999876 7778999999999999976


Q ss_pred             ccc---------cceeecccCCCCccc
Q psy11822        209 AVC---------NTYLQSRYYRAPEII  226 (229)
Q Consensus       209 ~~~---------~~~~gt~~y~aPE~l  226 (229)
                      +..         +...||.||++||++
T Consensus       626 dSy~~vdGmeLTSQgAGTYWYLPPEcF  652 (775)
T KOG1151|consen  626 DSYNSVDGMELTSQGAGTYWYLPPECF  652 (775)
T ss_pred             CccCcccceeeecccCceeeecCccee
Confidence            432         456899999999987

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=5.6e-29  Score=224.69  Aligned_cols=170  Identities=20%  Similarity=0.237  Sum_probs=131.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..++..||+|++......    ......+.+|+.+++.+.||||+  .+++++.......+|+||||++
T Consensus        24 GgFGtVYLAkdk~tg~~vAlKvIk~~~l~----e~~~~~~~~EI~IL~~L~HPNIV--rl~d~f~de~~~~lyIVMEY~~   97 (1021)
T PTZ00266         24 GRFGEVFLVKHKRTQEFFCWKAISYRGLK----EREKSQLVIEVNVMRELKHKNIV--RYIDRFLNKANQKLYILMEFCD   97 (1021)
T ss_pred             CCCeEEEEEEECCCCeEEEEEEEeccccC----HHHHHHHHHHHHHHHHcCCCCcC--eEEEEEEecCCCEEEEEEeCCC
Confidence            89999999999999999999998653221    11234568899999999999997  4555544444456899999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHC-------CCccccCCCCCeeeeCCC-------------CC
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQL-------GLIHADLKPENIMLVDPV-------------RQ  191 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~-------~iiHrDlkp~Nil~~~~~-------------~~  191 (229)
                      +++|..++... .....+++..++.|+.||+.||.|||+.       +||||||||+|||+....             +.
T Consensus        98 gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng  177 (1021)
T PTZ00266         98 AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNG  177 (1021)
T ss_pred             CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCC
Confidence            99976665431 1124588889999999999999999984       499999999999995321             22


Q ss_pred             CccEEEeecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+.+||+|||++..+... ......||+.|+|||++.+
T Consensus       178 ~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        178 RPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             CCceEEccCCccccccccccccccCCCccccCHHHHhc
Confidence            346999999999876543 2345689999999999854

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=7.6e-29  Score=200.18  Aligned_cols=162  Identities=22%  Similarity=0.266  Sum_probs=127.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+|+.||+|.++.....    ......+.+|+.+++.++|||++  .+++++.  +....++++||+
T Consensus        10 ~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~----~~~~~~~~~ei~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   81 (284)
T cd07839          10 EGTYGTVFKAKNRETHEIVALKRVRLDDDD----EGVPSSALREICLLKELKHKNIV--RLYDVLH--SDKKLTLVFEYC   81 (284)
T ss_pred             ccCCeEEEEEEECCCCcEEEEEEeeccccc----ccCccchhHHHHHHHhcCCCCee--eHHHHhc--cCCceEEEEecC
Confidence            389999999999999999999988653211    11233567899999999999997  5566654  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++.+..+...   ...+++..++.++.||++||.|||+++++||||||+||++    +.++.++|+|||+++.....  
T Consensus        82 ~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          82 DQDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI----NKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----cCCCcEEECccchhhccCCCCC
Confidence            87554444332   2358888999999999999999999999999999999999    77789999999999876443  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       155 ~~~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             CcCCCccccCCcChHHHhC
Confidence            2234567889999998865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0669|consensus

Probab=99.95  E-value=5.1e-30  Score=195.58  Aligned_cols=165  Identities=18%  Similarity=0.222  Sum_probs=131.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc------ccccc
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN------VKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~------~~~~~  125 (229)
                      .|.||+||+|+...+|++||+|++-.+.    .+...-....+|+++|..+.|+|++  .+++.+....      ...+|
T Consensus        27 qGtfgeVFkAr~~n~~kkvalkkvlmen----eKeGfpitalreikiL~~lkHenv~--nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   27 QGTFGEVFKARSKNTGKKVALKKVLMEN----EKEGFPITALREIKILQLLKHENVV--NLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             CchHHHHHHHhhcCccchhHHHHHHHhc----cccCCcHHHHHHHHHHHHhcchhHH--HHHHHHhhccCCcccccceee
Confidence            4999999999999999999999754421    1112223448999999999999997  5666554321      23479


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +||.+|+......+...   ..+++..++.+++.++++||.|+|...|+|||+||.|+|+    +.++.+||+|||+++.
T Consensus       101 lVf~~cehDLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI----t~dgilklADFGlar~  173 (376)
T KOG0669|consen  101 LVFDFCEHDLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI----TKDGILKLADFGLARA  173 (376)
T ss_pred             eeHHHhhhhHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE----cCCceEEeeccccccc
Confidence            99999998765444332   3468889999999999999999999999999999999999    8889999999999987


Q ss_pred             cCcc------cccceeecccCCCCccccCC
Q psy11822        206 VSKA------VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       206 ~~~~------~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ++..      ..++.+-|.+|++||.++|.
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~  203 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGD  203 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcc
Confidence            7532      44567789999999999884

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.95  E-value=9.1e-29  Score=200.11  Aligned_cols=164  Identities=24%  Similarity=0.272  Sum_probs=121.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc---ccCccccceehhhhhhc---ccccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA---LNHAFVTLAHLVDYAHC---NNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~---l~h~ni~~~~~~~~~~~---~~~~~~~l  126 (229)
                      |+||.||+|.+..+++.||+|.++.....    ......+.+|+.+++.   ++||||+  .+++++..   ......++
T Consensus        11 g~~g~v~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~h~ni~--~~~~~~~~~~~~~~~~~~l   84 (288)
T cd07863          11 GAYGTVYKARDPHSGHFVALKSVRVQTNE----DGLPLSTVREVALLKRLEAFDHPNIV--RLMDVCATSRTDRETKVTL   84 (288)
T ss_pred             cCCeEEEEEEECCCCcEEEEEEeccCcCC----CCCchHHHHHHHHHHHhhhcCCCCee--eeeeeeccccCCCCceEEE
Confidence            89999999999999999999987653111    0111123455555554   4799997  44444322   12345789


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +|||++++....+ .... ...+++.++..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++...
T Consensus        85 v~e~~~~~l~~~~-~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili----~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          85 VFEHVDQDLRTYL-DKVP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGQVKLADFGLARIY  158 (288)
T ss_pred             EEcccccCHHHHH-HhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccCccccc
Confidence            9999987443333 2211 2348888999999999999999999999999999999999    77889999999999876


Q ss_pred             Ccc-cccceeecccCCCCccccC
Q psy11822        207 SKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... ......||+.|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             cCcccCCCccccccccCchHhhC
Confidence            543 2345678999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=1.6e-28  Score=198.17  Aligned_cols=157  Identities=20%  Similarity=0.252  Sum_probs=127.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+.....     ......+.+|++++++++||||+  ..++++..  ....++||||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~--~~~~~lv~e~~   81 (279)
T cd06619          11 HGNGGTVYKAYHLLTRRILAVKVIPLDIT-----VELQKQIMSELEILYKCDSPYII--GFYGAFFV--ENRISICTEFM   81 (279)
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEEecCCC-----hHHHHHHHHHHHHHHhCCCCCee--eEEEEEEE--CCEEEEEEecC
Confidence            38999999999999999999998764311     11223568899999999999997  44444433  34568999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++....       .+++..+..++.|++.||.|||+.||+|+||||+||++    +.++.++|+|||++........
T Consensus        82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill----~~~~~~~l~dfg~~~~~~~~~~  150 (279)
T cd06619          82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV----NTRGQVKLCDFGVSTQLVNSIA  150 (279)
T ss_pred             CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE----CCCCCEEEeeCCcceecccccc
Confidence            999875441       35667778999999999999999999999999999999    7788999999999987766555


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||..|+|||++.+
T Consensus       151 ~~~~~~~~y~aPE~~~~  167 (279)
T cd06619         151 KTYVGTNAYMAPERISG  167 (279)
T ss_pred             cCCCCChhhcCceeecC
Confidence            66789999999999865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=1.5e-28  Score=206.43  Aligned_cols=163  Identities=18%  Similarity=0.153  Sum_probs=121.5

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++     ..++..||+|+++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....++
T Consensus        46 G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~~Ei~il~~l~~HpnIv--~l~~~~~--~~~~~~l  116 (375)
T cd05104          46 GAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-----LTEREALMSELKVLSYLGNHINIV--NLLGACT--VGGPTLV  116 (375)
T ss_pred             CccceEEEEEEeccccCccceeEEEEeccCCcC-----cHHHHHHHHHHHHHHHhcCCccee--eeeeeec--cCCccee
Confidence            99999999974     34677999999875321     11234568899999999 899998  4555543  3345799


Q ss_pred             eeeeeeCCCCCccCCCCC--------------------------------------------------------------
Q psy11822        127 MMEVTRRSQYTGATAPPP--------------------------------------------------------------  144 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~--------------------------------------------------------------  144 (229)
                      ||||+++|+|..++....                                                              
T Consensus       117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (375)
T cd05104         117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID  196 (375)
T ss_pred             eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence            999999998654433210                                                              


Q ss_pred             ----------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc---
Q psy11822        145 ----------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC---  211 (229)
Q Consensus       145 ----------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~---  211 (229)
                                ....+++..+..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++.......   
T Consensus       197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE----ECCCcEEEecCccceeccCcccccc
Confidence                      01135566677899999999999999999999999999999    6677999999999987654321   


Q ss_pred             -cceeecccCCCCccccC
Q psy11822        212 -NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 -~~~~gt~~y~aPE~l~~  228 (229)
                       ....++..|+|||++.+
T Consensus       273 ~~~~~~~~~y~aPE~~~~  290 (375)
T cd05104         273 KGNARLPVKWMAPESIFN  290 (375)
T ss_pred             cCCCCCCcceeChhHhcC
Confidence             22344567999999865

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0194|consensus

Probab=99.95  E-value=5.9e-29  Score=208.95  Aligned_cols=163  Identities=17%  Similarity=0.093  Sum_probs=127.2

Q ss_pred             CCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |.||.||+|+....+.    .||+|..+.+..   ....++..+.+|+++|++++||||+  .++++..  ....+|+||
T Consensus       168 GaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~---~~~~~~~e~m~EArvMr~l~H~NVV--r~yGVa~--~~~Pl~ivm  240 (474)
T KOG0194|consen  168 GAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE---LTKEQIKEFMKEARVMRQLNHPNVV--RFYGVAV--LEEPLMLVM  240 (474)
T ss_pred             ccccEEEEEEEEecCCceeeeeEEEeeccccc---ccHHHHHHHHHHHHHHHhCCCCCEE--EEEEEEc--CCCccEEEE
Confidence            8999999998765422    389998775211   1234556789999999999999998  4555433  445689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |+|+||+|+.++.+...  .++..+...++.+++.||+|||++++|||||...|+|+    +..+.+||+|||+|+.-..
T Consensus       241 El~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~----~~~~~vKISDFGLs~~~~~  314 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY----SKKGVVKISDFGLSRAGSQ  314 (474)
T ss_pred             EecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee----cCCCeEEeCccccccCCcc
Confidence            99999998888887443  48888889999999999999999999999999999999    7666899999999886542


Q ss_pred             cccc--ceeecccCCCCccccC
Q psy11822        209 AVCN--TYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~--~~~gt~~y~aPE~l~~  228 (229)
                      -...  ...-...|+|||.+..
T Consensus       315 ~~~~~~~~klPirWLAPEtl~~  336 (474)
T KOG0194|consen  315 YVMKKFLKKLPIRWLAPETLNT  336 (474)
T ss_pred             eeeccccccCcceecChhhhcc
Confidence            1111  1123457999999853

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=1.3e-28  Score=198.67  Aligned_cols=166  Identities=17%  Similarity=0.176  Sum_probs=124.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+.+..................+..++...||+|+  ...+.+.  .....++||||+
T Consensus         4 ~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~--~~~~~~~v~e~~   79 (278)
T cd05606           4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV--CMSYAFH--TPDKLSFILDLM   79 (278)
T ss_pred             cCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEe--eeeeeee--cCCEEEEEEecC
Confidence            489999999999889999999987653222111000000111223344456789986  3443333  334578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      .+++|......   ...+++..++.++.|++.||.|||+.+|+||||||+||++    +.++.++|+|||++........
T Consensus        80 ~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili----~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          80 NGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE----CCCCCEEEccCcCccccCccCC
Confidence            99998766554   3468899999999999999999999999999999999999    7778999999999987655444


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....|+..|+|||++.+
T Consensus       153 ~~~~~~~~y~aPE~~~~  169 (278)
T cd05606         153 HASVGTHGYMAPEVLQK  169 (278)
T ss_pred             cCcCCCcCCcCcHHhcC
Confidence            55689999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG4279|consensus

Probab=99.95  E-value=1.1e-28  Score=210.26  Aligned_cols=168  Identities=18%  Similarity=0.195  Sum_probs=135.2

Q ss_pred             cceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         45 RKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        45 ~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      ....+.+.|+||+||.|+|..|...+|||.++....      ...+-+..||.+.+.++|.||+.  -.  ..++....+
T Consensus       578 ~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds------r~~QPLhEEIaLH~~LrHkNIVr--YL--Gs~senGf~  647 (1226)
T KOG4279|consen  578 NERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS------REVQPLHEEIALHSTLRHKNIVR--YL--GSVSENGFF  647 (1226)
T ss_pred             CceEEeecCceeEEEeeccccceeEEEeeecccccc------hhhccHHHHHHHHHHHhhHhHHH--Hh--hccCCCCeE
Confidence            344455569999999999999999999999876422      12334578999999999999973  22  234555667


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCcc--ccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVL--VPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l--~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      -|.||-++||+|..++..  ..+++  .+.....+.+||++||.|||.+.|||||||-+|||+   .+-.|.+||+|||.
T Consensus       648 kIFMEqVPGGSLSsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLv---NTySGvlKISDFGT  722 (1226)
T KOG4279|consen  648 KIFMEQVPGGSLSSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLV---NTYSGVLKISDFGT  722 (1226)
T ss_pred             EEEeecCCCCcHHHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEE---eeccceEEeccccc
Confidence            889999999998777665  23455  556677899999999999999999999999999999   34568999999999


Q ss_pred             ceecCc--ccccceeecccCCCCcccc
Q psy11822        203 ASHVSK--AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       203 a~~~~~--~~~~~~~gt~~y~aPE~l~  227 (229)
                      ++++..  +...+..||..|||||++-
T Consensus       723 sKRLAginP~TETFTGTLQYMAPEvID  749 (1226)
T KOG4279|consen  723 SKRLAGINPCTETFTGTLQYMAPEVID  749 (1226)
T ss_pred             chhhccCCccccccccchhhhChHhhc
Confidence            999865  3556789999999999973

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=1.5e-28  Score=198.42  Aligned_cols=162  Identities=17%  Similarity=0.183  Sum_probs=122.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc---ccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT---PGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~---~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+++.+|+|.+.+........   ...+.+|..   .+....|||++.  ....+.  .....++||
T Consensus         4 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~--~~~~~~lv~   76 (279)
T cd05633           4 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG---ETLALNERIMLSLVSTGDCPFIVC--MTYAFH--TPDKLCFIL   76 (279)
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEEccccccchH---HHHHHHHHHHHHHHhhCCCCcEeE--EEEEEe--cCCeEEEEE
Confidence            4899999999999999999999886532211110   011123332   333447898863  333332  234578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..   ...+++..+..++.|++.||.|||+.+|+||||||+||++    +.++.++|+|||++.....
T Consensus        77 e~~~~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~----~~~~~~~l~dfg~~~~~~~  149 (279)
T cd05633          77 DLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSK  149 (279)
T ss_pred             ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE----CCCCCEEEccCCcceeccc
Confidence            99999998766554   3458888999999999999999999999999999999999    7788999999999987655


Q ss_pred             ccccceeecccCCCCcccc
Q psy11822        209 AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~  227 (229)
                      .......|++.|+|||++.
T Consensus       150 ~~~~~~~~~~~y~aPE~~~  168 (279)
T cd05633         150 KKPHASVGTHGYMAPEVLQ  168 (279)
T ss_pred             cCccCcCCCcCccCHHHhc
Confidence            4444567999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.4e-28  Score=195.02  Aligned_cols=165  Identities=20%  Similarity=0.221  Sum_probs=130.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++++||+|.++...... ........+.+|+.+++.++||||+  .+++++..  ....++||||+
T Consensus        12 ~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~--~~~~~~v~e~~   86 (263)
T cd06625          12 QGAFGRVYLCYDVDTGRELAVKQVPFDPDSP-ETKKEVNALECEIQLLKNLQHERIV--QYYGCLRD--DETLSIFMEYM   86 (263)
T ss_pred             CCCceEEEEEEEcCCCcEEEEEEEeecccch-hhHHHHHHHHHHHHHHHhCCCCCee--eeEEEEcc--CCeEEEEEEEC
Confidence            3889999999998899999999876532221 1122344678999999999999997  45554443  34689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++...+..   ...+++..+..++.|++.||.|||+.|++||||+|+||++    +.++.++|+|||+++.......
T Consensus        87 ~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv----~~~~~~~l~dfg~~~~~~~~~~  159 (263)
T cd06625          87 PGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRLQTICS  159 (263)
T ss_pred             CCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceecccccc
Confidence            99997766554   2357888889999999999999999999999999999999    7778999999999987643211


Q ss_pred             -----cceeecccCCCCccccC
Q psy11822        212 -----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 -----~~~~gt~~y~aPE~l~~  228 (229)
                           ....|+..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~  181 (263)
T cd06625         160 SGTGMKSVTGTPYWMSPEVISG  181 (263)
T ss_pred             ccccccCCCcCccccCcceecc
Confidence                 34567889999999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.7e-28  Score=198.16  Aligned_cols=164  Identities=23%  Similarity=0.278  Sum_probs=126.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..++..||+|.++.....    ......+.+|+.+++.++|||++  .+++++.  +....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~   81 (285)
T cd07861          10 EGTYGVVYKGRNKKTGQIVAMKKIRLESEE----EGVPSTAIREISLLKELQHPNIV--CLQDVLM--QESRLYLIFEFL   81 (285)
T ss_pred             ccCceEEEEEEECCCCcEEEEEEecccccc----CCchHHHHHHHHHHHhcCCCCEe--eeEEEEe--eCCeEEEEEecC
Confidence            389999999999999999999987653211    11234567899999999999997  4454443  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++ ++..+.........+++..+..++.|++.||.|||+.+++||||||+||++    +.++.++|+|||++......  
T Consensus        82 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          82 SM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI----DNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             CC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE----cCCCcEEECcccceeecCCCcc
Confidence            85 433333332223468888899999999999999999999999999999999    77889999999999866433  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLG  175 (285)
T ss_pred             cccCCcccccccChHHhcC
Confidence            2234567889999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0614|consensus

Probab=99.95  E-value=6.1e-29  Score=205.32  Aligned_cols=176  Identities=22%  Similarity=0.215  Sum_probs=146.0

Q ss_pred             cCcccccceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc
Q psy11822         39 IKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC  118 (229)
Q Consensus        39 ~~~~~~~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~  118 (229)
                      .......+....+.|+||+|-+.........+|+|++++...-   ...+.+.+..|-++|..++.|+|+  +++..+. 
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV---dtkQqeHv~sEr~Im~~~~s~fIv--rLYrTfr-  490 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV---DTKQQEHVFSERNIMMECRSDFIV--RLYRTFR-  490 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc---chhHHHHHHhHHHHHHhcCchHHH--HHHHHhc-
Confidence            3333444444455599999999987655556999999986543   355667889999999999999997  4554443 


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                       +.+.+|++||-|-||.+--+++.   .+.+....++.++.++++|++|||++|||.|||||+|.++    +.+|.+||.
T Consensus       491 -d~kyvYmLmEaClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL----d~~Gy~KLV  562 (732)
T KOG0614|consen  491 -DSKYVYMLMEACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL----DNRGYLKLV  562 (732)
T ss_pred             -cchhhhhhHHhhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee----ccCCceEEe
Confidence             66789999999999996666665   4679999999999999999999999999999999999999    999999999


Q ss_pred             ecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||+|+.+..+ ..++.||||.|.|||++++
T Consensus       563 DFGFAKki~~g~KTwTFcGTpEYVAPEIILn  593 (732)
T KOG0614|consen  563 DFGFAKKIGSGRKTWTFCGTPEYVAPEIILN  593 (732)
T ss_pred             ehhhHHHhccCCceeeecCCcccccchhhhc
Confidence            99999999765 6789999999999999875

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=3.1e-28  Score=193.39  Aligned_cols=162  Identities=15%  Similarity=0.112  Sum_probs=124.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|.+.....     ......+.+|+++++.++||||+.  .++++.  .....++||||+
T Consensus         5 ~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~   75 (252)
T cd05084           5 RGNFGEVFSGRLRADNTPVAVKSCRETLP-----PDLKAKFLQEARILKQYSHPNIVR--LIGVCT--QKQPIYIVMELV   75 (252)
T ss_pred             cccCccEEEEEEecCCceEEEEecCccCC-----HHHHHHHHHHHHHHHhCCCCCcce--EEEEEc--CCCCeEEEEeec
Confidence            48899999999998999999998654211     112235688999999999999984  444433  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++...  ...+++.++..++.|+++||.|||+++++||||||+||++    +.++.+||+|||++........
T Consensus        76 ~~~~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~  149 (252)
T cd05084          76 QGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV----TEKNVLKISDFGMSREEEDGVY  149 (252)
T ss_pred             cCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE----cCCCcEEECccccCcccccccc
Confidence            999977665432  2247788889999999999999999999999999999999    7777999999999886543321


Q ss_pred             cc----eeecccCCCCccccC
Q psy11822        212 NT----YLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~----~~gt~~y~aPE~l~~  228 (229)
                      ..    ..++..|+|||.+.+
T Consensus       150 ~~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084         150 ASTGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             cccCCCCCCceeecCchhhcC
Confidence            11    122456999998764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0696|consensus

Probab=99.94  E-value=2.2e-28  Score=197.96  Aligned_cols=169  Identities=19%  Similarity=0.165  Sum_probs=135.3

Q ss_pred             cceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccc
Q psy11822         45 RKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKA  123 (229)
Q Consensus        45 ~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~  123 (229)
                      ....+.+.|+||.|.+|..+.|.+.||||++++...-.   ....+.-..|-++|..-. .|+++  .+...+.  +...
T Consensus       352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ---dDDvectm~EKrvLAL~~kppFL~--qlHScFQ--TmDR  424 (683)
T KOG0696|consen  352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ---DDDVECTMVEKRVLALPGKPPFLV--QLHSCFQ--TMDR  424 (683)
T ss_pred             ceEEEeccCccceeeeecccCcchhhhhhhhccceeee---cCcccceehhhhheecCCCCchHH--HHHHHhh--hhhh
Confidence            33344455999999999999999999999998853321   122334467778887764 55554  4444444  3456


Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +|+||||+.||+|-..+++   .+++-++.+..++.+|+.||=+||++|||.||||.+||++    +.+|++||+|||++
T Consensus       425 LyFVMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL----d~eGHiKi~DFGmc  497 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML----DSEGHIKIADFGMC  497 (683)
T ss_pred             eeeEEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe----ccCCceEeeecccc
Confidence            8999999999998877777   5679999999999999999999999999999999999999    99999999999999


Q ss_pred             eecC--cccccceeecccCCCCcccc
Q psy11822        204 SHVS--KAVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       204 ~~~~--~~~~~~~~gt~~y~aPE~l~  227 (229)
                      +.--  .....+.||||.|+|||++.
T Consensus       498 KEni~~~~TTkTFCGTPdYiAPEIi~  523 (683)
T KOG0696|consen  498 KENIFDGVTTKTFCGTPDYIAPEIIA  523 (683)
T ss_pred             cccccCCcceeeecCCCcccccceEE
Confidence            8653  33556899999999999975

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=2.9e-28  Score=205.87  Aligned_cols=163  Identities=18%  Similarity=0.125  Sum_probs=121.7

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++..     ++..||+|+++....     ....+.+.+|+.+++.+. ||||+  ++++++.  .....|+
T Consensus        48 G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~~Ei~~l~~l~~HpnIv--~l~~~~~--~~~~~~l  118 (400)
T cd05105          48 GAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-----SSEKQALMSELKIMTHLGPHLNIV--NLLGACT--KSGPIYI  118 (400)
T ss_pred             CCCceEEEEEEcccCCCCCceEEEEEecCCCCC-----hHHHHHHHHHHHHHHhcCCCCCee--eEEEEEc--cCCceEE
Confidence            9999999998643     245799999865321     122346789999999995 99998  4555543  3346799


Q ss_pred             eeeeeeCCCCCccCCCCC--------------------------------------------------------------
Q psy11822        127 MMEVTRRSQYTGATAPPP--------------------------------------------------------------  144 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~--------------------------------------------------------------  144 (229)
                      ||||+++|+|..++....                                                              
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (400)
T cd05105         119 ITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEAS  198 (400)
T ss_pred             EEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhh
Confidence            999999998654432210                                                              


Q ss_pred             -------------------------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        145 -------------------------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       145 -------------------------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                                                     ....+++.++..++.|++.||.|||+.+|+||||||+|||+    +.++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill----~~~~  274 (400)
T cd05105         199 KYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL----AQGK  274 (400)
T ss_pred             hhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE----eCCC
Confidence                                           01235556667899999999999999999999999999999    7777


Q ss_pred             cEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+++.....    ......+++.|+|||++.+
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  313 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD  313 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC
Confidence            9999999999876432    1223456788999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.94  E-value=9.9e-29  Score=196.65  Aligned_cols=160  Identities=26%  Similarity=0.335  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++...........    ...+|+.+++.++||||+  .+.++...  ....++||||++
T Consensus        10 G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~----~~~~e~~~~~~l~~~~i~--~~~~~~~~--~~~~~~v~~~~~   81 (260)
T PF00069_consen   10 GGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE----ENIREIKILRRLRHPNIV--QILDVFQD--DNYLYIVMEYCP   81 (260)
T ss_dssp             ESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH----HHHHHHHHHHHHTBTTBC--HEEEEEEE--SSEEEEEEEEET
T ss_pred             CCCEEEEEEEECCCCeEEEEEEeccccccccccc----hhhhhhhccccccccccc--cccccccc--cccccccccccc
Confidence            9999999999999999999999887543322211    224589999999999997  34444432  455789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec--Cccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAV  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~--~~~~  210 (229)
                      ++++..++..   ...+++.+++.++.|+++||.+||+++++|+||||+||++    +.++.++|+|||.+...  ....
T Consensus        82 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~----~~~~~~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   82 GGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL----DENGEVKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             TEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE----STTSEEEESSGTTTEESTSTTSE
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence            9987666552   3468888999999999999999999999999999999999    88889999999999864  2334


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....+++.|+|||++.
T Consensus       155 ~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             BSSSSSSGGGSCHHHHT
T ss_pred             ccccccccccccccccc
Confidence            45678899999999976

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=3.3e-28  Score=199.08  Aligned_cols=161  Identities=20%  Similarity=0.280  Sum_probs=130.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..+|+|.++....     .....++.+|+++++.++||||+.  +++.+.  .....++||||+
T Consensus        11 ~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~ey~   81 (308)
T cd06615          11 AGNGGVVTKVLHRPSGLIMARKLIHLEIK-----PAIRNQIIRELKVLHECNSPYIVG--FYGAFY--SDGEISICMEHM   81 (308)
T ss_pred             CCCCeEEEEEEEcCCCeEEEEEEeccccC-----HHHHHHHHHHHHHHHhCCCCCCCe--EEEEEe--eCCEEEEEeecc
Confidence            39999999999999999999998765321     112335678999999999999984  444433  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++|..++..   ...+++..+..++.|+++||.|||+ .+++||||||+||++    +.++.++|+|||++.......
T Consensus        82 ~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~  154 (308)
T cd06615          82 DGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSM  154 (308)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE----ecCCcEEEccCCCcccccccc
Confidence            99998777655   2457888889999999999999997 689999999999999    777899999999988765544


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       155 ~~~~~~~~~~~aPE~~~~  172 (308)
T cd06615         155 ANSFVGTRSYMSPERLQG  172 (308)
T ss_pred             cccCCCCcCccChhHhcC
Confidence            456788999999998765

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=4.4e-28  Score=195.97  Aligned_cols=163  Identities=21%  Similarity=0.219  Sum_probs=131.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|.++....     ......+.+|+.+++.++|+||+  .+++.+.  .....++||||++
T Consensus        12 g~~g~v~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~lv~e~~~   82 (286)
T cd06622          12 GNYGSVYKVLHRPTGVTMAMKEIRLELD-----ESKFNQIIMELDILHKAVSPYIV--DFYGAFF--IEGAVYMCMEYMD   82 (286)
T ss_pred             cCCeEEEEEEEcCCCcEEEEEEeecccC-----HHHHHHHHHHHHHHHhcCCCcHH--hhhhhee--cCCeEEEEEeecC
Confidence            8999999999998999999998764311     11224568899999999999997  4555443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++++..++........+++..+..++.|++.||.|||+ .+++||||||+||++    +.++.++|+|||++..+.....
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~  158 (286)
T cd06622          83 AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV----NGNGQVKLCDFGVSGNLVASLA  158 (286)
T ss_pred             CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE----CCCCCEEEeecCCcccccCCcc
Confidence            99987765543223468888899999999999999996 699999999999999    7778999999999987755544


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....|++.|+|||++.+
T Consensus       159 ~~~~~~~~y~aPE~~~~  175 (286)
T cd06622         159 KTNIGCQSYMAPERIKS  175 (286)
T ss_pred             ccCCCccCccCcchhcC
Confidence            55678889999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.94  E-value=3.2e-28  Score=198.36  Aligned_cols=160  Identities=23%  Similarity=0.234  Sum_probs=123.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.++....     ......+.+|+.+++.++||||+.  +++++.  .....++||||++
T Consensus        17 g~~g~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~nI~~--~~~~~~--~~~~~~lv~e~~~   87 (301)
T cd07873          17 GTYATVYKGRSKLTDNLVALKEIRLEHE-----EGAPCTAIREVSLLKDLKHANIVT--LHDIIH--TEKSLTLVFEYLD   87 (301)
T ss_pred             CcCEEEEEEEEcCCCcEEEEEEEecccc-----cCchhHHHHHHHHHHhcCCCCcce--EEEEEe--cCCeEEEEEeccc
Confidence            8999999999999999999998864321     112224578999999999999984  444443  3345799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +.....+...   ...+++..+..++.|++.||.|||+.+|+|+||||+||++    +.++.++|+|||++......  .
T Consensus        88 ~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          88 KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI----NERGELKLADFGLARAKSIPTKT  160 (301)
T ss_pred             cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE----CCCCcEEECcCcchhccCCCCCc
Confidence            6433333222   2347778889999999999999999999999999999999    77789999999999765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||++.+
T Consensus       161 ~~~~~~~~~y~~PE~~~~  178 (301)
T cd07873         161 YSNEVVTLWYRPPDILLG  178 (301)
T ss_pred             ccccceeecccCcHHHhC
Confidence            234577899999998754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=7.9e-28  Score=203.13  Aligned_cols=153  Identities=23%  Similarity=0.245  Sum_probs=121.4

Q ss_pred             CCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|...  .++..||+|.+...           ....+|+++++.++||||+.  +++.+.  .....+++||+
T Consensus       103 G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----------~~~~~E~~il~~l~h~~iv~--~~~~~~--~~~~~~lv~e~  167 (392)
T PHA03207        103 GSEGEVFVCTKHGDEQRKKVIVKAVTGG-----------KTPGREIDILKTISHRAIIN--LIHAYR--WKSTVCMVMPK  167 (392)
T ss_pred             CCCeEEEEEEEcCCccceeEEEEecccc-----------ccHHHHHHHHHhcCCCCccc--eeeeEe--eCCEEEEEehh
Confidence            999999999753  45789999987542           12367999999999999984  444433  33457899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.+..+..+ ..   ...+++.+++.++.|++.||.|||++||+||||||+|||+    +..+.++|+|||+++..... 
T Consensus       168 ~~~~l~~~l-~~---~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill----~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        168 YKCDLFTYV-DR---SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL----DEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             cCCCHHHHH-Hh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEccCccccccCccc
Confidence            986554444 22   3468889999999999999999999999999999999999    77889999999999876443 


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......||+.|+|||++.+
T Consensus       240 ~~~~~~~~~gt~~y~aPE~~~~  261 (392)
T PHA03207        240 DTPQCYGWSGTLETNSPELLAL  261 (392)
T ss_pred             ccccccccccccCccCHhHhcC
Confidence               2234679999999999865

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.94  E-value=2.7e-28  Score=204.74  Aligned_cols=163  Identities=17%  Similarity=0.105  Sum_probs=120.4

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|.+..     ++..||+|.++.....     ...+.+.+|+.+++.+ +|+||+  .+++.+.  ....+++
T Consensus        49 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~il~~l~~h~nIv--~~~~~~~--~~~~~~l  119 (374)
T cd05106          49 GAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-----DEREALMSELKILSHLGQHKNIV--NLLGACT--HGGPVLV  119 (374)
T ss_pred             CCcccEEEEEEecCCcccccceeEEEeccCCCCH-----HHHHHHHHHHHHHHhhccCCcee--eEeeEec--CCCCeEE
Confidence            8999999998643     3458999998753211     1234568899999999 899997  4444433  3446799


Q ss_pred             eeeeeeCCCCCccCCCCC--------------------------------------------------------------
Q psy11822        127 MMEVTRRSQYTGATAPPP--------------------------------------------------------------  144 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~--------------------------------------------------------------  144 (229)
                      ||||+++|+|..++....                                                              
T Consensus       120 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (374)
T cd05106         120 ITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKD  199 (374)
T ss_pred             eHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccc
Confidence            999999998654432110                                                              


Q ss_pred             -----CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc----ccee
Q psy11822        145 -----PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC----NTYL  215 (229)
Q Consensus       145 -----~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~----~~~~  215 (229)
                           ....+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.......    ....
T Consensus       200 ~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~----~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         200 EEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL----TDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             hhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE----eCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                 11235556678899999999999999999999999999999    7777999999999987644321    1233


Q ss_pred             ecccCCCCccccC
Q psy11822        216 QSRYYRAPEIILG  228 (229)
Q Consensus       216 gt~~y~aPE~l~~  228 (229)
                      +++.|||||++.+
T Consensus       276 ~~~~y~aPE~~~~  288 (374)
T cd05106         276 LPVKWMAPESIFD  288 (374)
T ss_pred             CccceeCHHHhcC
Confidence            4567999998754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=2.8e-28  Score=195.43  Aligned_cols=162  Identities=12%  Similarity=0.064  Sum_probs=124.7

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|++.   ..+..||+|.++.....     .....+.+|+.+++.++||||+.  +.+++.  .....++||
T Consensus        15 ~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~   85 (266)
T cd05064          15 TGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-----KQRRGFLAEALTLGQFDHSNIVR--LEGVIT--RGNTMMIVT   85 (266)
T ss_pred             ccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-----HHHHHHHHHHHHHhcCCCCCcCe--EEEEEe--cCCCcEEEE
Confidence            3899999999764   34679999998753211     12235688999999999999984  444443  345679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++|++..++...  ...+++.+++.++.|++.||+|||+++++||||||+||++    +.++.++++|||.+.....
T Consensus        86 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili----~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          86 EYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV----NSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE----cCCCcEEECCCcccccccc
Confidence            999999987765542  2358888899999999999999999999999999999999    7778999999998765432


Q ss_pred             cc---ccceeecccCCCCccccC
Q psy11822        209 AV---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~---~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   .....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~  182 (266)
T cd05064         160 EAIYTTMSGKSPVLWAAPEAIQY  182 (266)
T ss_pred             cchhcccCCCCceeecCHHHHhh
Confidence            21   112344578999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=2.3e-28  Score=195.53  Aligned_cols=167  Identities=20%  Similarity=0.191  Sum_probs=129.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|.+....... ........+.+|+.+++.+.||||+.  .++++.......++++|||+
T Consensus        12 ~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~~v~e~~   88 (265)
T cd06652          12 QGAFGRVYLCYDADTGRELAVKQVQFDPESP-ETSKEVNALECEIQLLKNLLHERIVQ--YYGCLRDPMERTLSIFMEHM   88 (265)
T ss_pred             cCCceEEEEEEEcCCCcEEEEEEeecCcCCc-ccHHHHHHHHHHHHHHHhcCCCCeee--EEeEeccCCCceEEEEEEec
Confidence            4899999999999999999999875321110 11223446788999999999999974  44444333334578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..   ...+++..+..++.|++.||+|||+.+++|+||||+||++    +.++.++|+|||++......  
T Consensus        89 ~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          89 PGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR----DSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe----cCCCCEEECcCccccccccccc
Confidence            99997766544   2347777888999999999999999999999999999999    77789999999999865431  


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......|+..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~  183 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISG  183 (265)
T ss_pred             cccccccCCCCccccChhhhcC
Confidence               2234568889999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=8e-28  Score=194.30  Aligned_cols=163  Identities=18%  Similarity=0.164  Sum_probs=124.8

Q ss_pred             cCCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.    +..+++.||+|.++....      .....+.+|+++++.++|||++.  +.+++...+....++|
T Consensus        14 ~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~~~~~~~~lv   85 (284)
T cd05081          14 KGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA------EHLRDFEREIEILKSLQHDNIVK--YKGVCYSAGRRNLRLV   85 (284)
T ss_pred             CCCCceEEEEEecCCcCCCCcEEEEEEeccCCH------HHHHHHHHHHHHHHhCCCCCeeE--EEEEEccCCCCceEEE
Confidence            38999999987    445789999999765321      12345688999999999999984  3333323333457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++++|..++...  ...+++..+..++.|++.||+|||++|++||||||+||++    +.++.+||+|||++....
T Consensus        86 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          86 MEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV----ESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             EEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE----CCCCeEEECCCccccccc
Confidence            9999999987765432  1347888889999999999999999999999999999999    777899999999998765


Q ss_pred             cccc-----cceeecccCCCCccccC
Q psy11822        208 KAVC-----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~-----~~~~gt~~y~aPE~l~~  228 (229)
                      ....     ....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~  185 (284)
T cd05081         160 QDKEYYKVREPGESPIFWYAPESLTE  185 (284)
T ss_pred             CCCcceeecCCCCCceEeeCHHHhcc
Confidence            4321     11223445999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=5.5e-28  Score=198.42  Aligned_cols=162  Identities=17%  Similarity=0.119  Sum_probs=122.4

Q ss_pred             ccCCceeeeeeecCCCCcE----EEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         51 CLDDIGQVNVPTDLEGGEL----LAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      +.|+||.||+|++..+++.    ||+|.++....     ......+.+|+.+++.++||||+.  .++++..   ...++
T Consensus        16 g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~--~~g~~~~---~~~~~   85 (316)
T cd05108          16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-----PKANKEILDEAYVMASVDNPHVCR--LLGICLT---STVQL   85 (316)
T ss_pred             ecCCCceEEEEEEecCCCccceeEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCCCCe--EEEEEcC---CCcee
Confidence            3499999999998766654    89999864211     112335678999999999999984  4444332   23579


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ++||+++|++...+....  ..+++..+..++.|++.||+|||+.+|+||||||+|||+    +.++.+||+|||+++..
T Consensus        86 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill----~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV----KTPQHVKITDFGLAKLL  159 (316)
T ss_pred             eeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe----cCCCcEEEccccccccc
Confidence            999999999766554421  246777788999999999999999999999999999999    77789999999999877


Q ss_pred             Ccccc----cceeecccCCCCccccC
Q psy11822        207 SKAVC----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~~----~~~~gt~~y~aPE~l~~  228 (229)
                      .....    ....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~  185 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILH  185 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhcc
Confidence            54321    22334567999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-28  Score=199.19  Aligned_cols=172  Identities=21%  Similarity=0.225  Sum_probs=128.7

Q ss_pred             cCCceeeeeeecCC--CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLE--GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+..  +++.||+|.+.....   ........+.+|+.+++.++||||+  .+++++........++|||
T Consensus        10 ~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~~~~~~~~~lv~e   84 (316)
T cd07842          10 RGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE---QYTGISQSACREIALLRELKHENVV--SLVEVFLEHADKSVYLLFD   84 (316)
T ss_pred             cCCcEEEEEEEecCCCCCCeEEEEEeccccc---cccCccHHHHHHHHHHHhcCCCCcc--ceEEEEeCCCCceEEEEEe
Confidence            38899999999988  899999999876321   0111223457789999999999997  4555555443456899999


Q ss_pred             eeeCCCCCccCCCCCC-CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPP-AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |++++++..+...... ...+++..+..++.|++.||.|||+.+|+||||||+||++....+..+.+||+|||++.....
T Consensus        85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~  164 (316)
T cd07842          85 YAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA  164 (316)
T ss_pred             CCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence            9987654333222111 235788888999999999999999999999999999999944223388999999999987643


Q ss_pred             c-----cccceeecccCCCCccccC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .     ......+++.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         165 PLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             CcccccccCCccccccccCHHHHhC
Confidence            2     1234578899999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=4.5e-28  Score=208.95  Aligned_cols=163  Identities=23%  Similarity=0.262  Sum_probs=115.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcccc----ceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT----LAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~----~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||||+++....       ....+..|+.++..++|.++.    .+.+.+++.. .....++||
T Consensus       140 G~fg~V~~a~~~~~~~~vAvK~i~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-~~~~~~iv~  211 (467)
T PTZ00284        140 GTFGKVVEAWDRKRKEYCAVKIVRNVPK-------YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-ETGHMCIVM  211 (467)
T ss_pred             ccCEEEEEEEEcCCCeEEEEEEEecchh-------hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc-CCceEEEEE
Confidence            9999999999999999999999864211       011224455566555554421    1234444432 234578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCC------------CCccE
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR------------QPYRV  195 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~------------~~~~~  195 (229)
                      |++.+..++.+..    ...+++.++..++.||+.||.|||+ .|||||||||+|||+.....            ..+.+
T Consensus       212 ~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~v  287 (467)
T PTZ00284        212 PKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRV  287 (467)
T ss_pred             eccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceE
Confidence            9985554444432    2458888899999999999999998 59999999999999943211            12359


Q ss_pred             EEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||.+..... .....+||+.|+|||++.+
T Consensus       288 kl~DfG~~~~~~~-~~~~~~gt~~Y~APE~~~~  319 (467)
T PTZ00284        288 RICDLGGCCDERH-SRTAIVSTRHYRSPEVVLG  319 (467)
T ss_pred             EECCCCccccCcc-ccccccCCccccCcHHhhc
Confidence            9999998865433 2356789999999999875

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=4.7e-28  Score=193.87  Aligned_cols=158  Identities=22%  Similarity=0.242  Sum_probs=127.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++.....      .....+.+|+.+++.++||||+.  +++.+.  .....++||||++
T Consensus        20 g~~g~vy~~~~~~~~~~~aik~~~~~~~------~~~~~~~~e~~~l~~~~h~~ii~--~~~~~~--~~~~~~iv~e~~~   89 (267)
T cd06646          20 GTYGDVYKARNLHTGELAAVKIIKLEPG------DDFSLIQQEIFMVKECKHCNIVA--YFGSYL--SREKLWICMEYCG   89 (267)
T ss_pred             CCCeEEEEEEECCCCeEEEEEEEecCcc------chHHHHHHHHHHHHhcCCCCeee--eeEEEE--eCCEEEEEEeCCC
Confidence            8999999999989999999999864321      11234578999999999999974  443333  3345789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   ...+++.++..++.|++.||.|||+.+|+||||+|+||++    +..+.++|+|||++......  .
T Consensus        90 ~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          90 GGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL----TDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCCEEECcCccceeecccccc
Confidence            9997766543   2357888889999999999999999999999999999999    77789999999999876433  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....|++.|+|||.+.
T Consensus       163 ~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         163 RKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cCccccCccccCHhHcc
Confidence            34567889999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=5.7e-28  Score=195.08  Aligned_cols=162  Identities=23%  Similarity=0.287  Sum_probs=129.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|++......    ....+.+.+|+.+++.++|+|++  .+++++.  .....++||||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~--~~~~~~~v~e~~   82 (286)
T cd07847          11 EGSYGVVFKCRNRETGQIVAIKKFVESEDD----PVIKKIALREIRMLKQLKHPNLV--NLIEVFR--RKRKLHLVFEYC   82 (286)
T ss_pred             ccCCeEEEEEEECCCCcEEEEEEEeecccC----ccccHHHHHHHHHHHhCCCCCEe--eeeeEEe--eCCEEEEEEecc
Confidence            388999999999989999999987643111    11223457899999999999997  4454443  334578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +++++..+...   ...+++.++..++.|++.||.|||+.+++||||||+||++    +.++.++|+|||++....... 
T Consensus        83 ~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          83 DHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI----TKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             CccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE----cCCCcEEECccccceecCCCcc
Confidence            99987776544   2358888899999999999999999999999999999999    777899999999998775432 


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         156 DYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             cccCcccccccCCHHHHhC
Confidence             234567889999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=6.3e-28  Score=195.03  Aligned_cols=164  Identities=16%  Similarity=0.156  Sum_probs=127.0

Q ss_pred             cCCceeeeeeec----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTD----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|++    ..++..||+|.++....     ......+.+|+.+++.+.|||++.  +.+++........++|
T Consensus        14 ~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~~~~~~~~lv   86 (284)
T cd05079          14 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-----GNHIADLKKEIEILRNLYHENIVK--YKGICTEDGGNGIKLI   86 (284)
T ss_pred             CCCceeEEEEEEccCCCCccceEEEEEcCcccc-----HHHHHHHHHHHHHHHhCCCCCeee--eeeEEecCCCCceEEE
Confidence            389999999974    45788999999875321     112345789999999999999974  4444433333457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++++|..++....  ..+++.++..++.|++.||+|||++|++||||||+||++    +.++.++|+|||+++.+.
T Consensus        87 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~----~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079          87 MEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             EEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE----cCCCCEEECCCccccccc
Confidence            99999999877754422  247888889999999999999999999999999999999    777899999999998764


Q ss_pred             ccc-----ccceeecccCCCCccccC
Q psy11822        208 KAV-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      ...     .....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~y~apE~~~~  186 (284)
T cd05079         161 TDKEYYTVKDDLDSPVFWYAPECLIQ  186 (284)
T ss_pred             cCccceeecCCCCCCccccCHHHhcc
Confidence            421     123456677999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=3.8e-28  Score=194.31  Aligned_cols=165  Identities=18%  Similarity=0.165  Sum_probs=128.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|++..+++.||+|.++.....   .......+.+|+.+++.++|||++  ..++++..  ....+++|||++
T Consensus        13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~~--~~~~~~v~e~~~   85 (267)
T cd08228          13 GQFSEVYRATCLLDRKPVALKKVQIFEMM---DAKARQDCVKEIDLLKQLNHPNVI--KYLDSFIE--DNELNIVLELAD   85 (267)
T ss_pred             CCCeeEEEEEEeCCCCEEEEEEeeccccC---CHHHHHHHHHHHHHHHhCCCccee--eeeeeEEE--CCeEEEEEEecC
Confidence            89999999999999999999986542111   122234568899999999999997  44544432  345789999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      ++++..+.... .....+++..+..++.|++.||+|||+++++|+||||+||++    +..+.++|+|||++....... 
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~----~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE----cCCCCEEECccccceeccchhH
Confidence            99876554321 112347777889999999999999999999999999999999    777899999999998765432 


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....|++.|+|||++.+
T Consensus       162 ~~~~~~~~~~~~aPE~~~~  180 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             HHhcCCCCccccChhhhcc
Confidence             234578889999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.8e-28  Score=193.70  Aligned_cols=166  Identities=20%  Similarity=0.209  Sum_probs=129.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+....... ........+.+|+.+++.++|+||+  ..+++.........+++|||++
T Consensus        13 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~--~~~~~~~~~~~~~~~~v~e~~~   89 (264)
T cd06653          13 GAFGEVYLCYDADTGRELAVKQVPFDPDSQ-ETSKEVNALECEIQLLKNLRHDRIV--QYYGCLRDPEEKKLSIFVEYMP   89 (264)
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEEecCcccc-hhhHHHHHHHHHHHHHHHcCCCCcc--eEEEEEEcCCCCEEEEEEEeCC
Confidence            999999999999999999999864321110 1122344678999999999999997  4444443333445789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++......   ...+++..+..++.|++.||.|||+.+++|+||||+||++    +.++.++|+|||+++.....   
T Consensus        90 ~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  162 (264)
T cd06653          90 GGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRIQTICMS  162 (264)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECcccccccccccccc
Confidence            9987666544   2347777888999999999999999999999999999999    77789999999999866431   


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......|+..|+|||++.+
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~  183 (264)
T cd06653         163 GTGIKSVTGTPYWMSPEVISG  183 (264)
T ss_pred             CccccccCCcccccCHhhhcC
Confidence              1234568899999999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=6e-28  Score=193.26  Aligned_cols=158  Identities=22%  Similarity=0.267  Sum_probs=127.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++.....      ....+.+|+.+++.++||||+.  +++.+.  .....++||||++
T Consensus        20 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~e~~~~~~l~h~~ii~--~~~~~~--~~~~~~lv~e~~~   89 (267)
T cd06645          20 GTYGDVYKARNVNTGELAAIKVIKLEPGE------DFAVVQQEIIMMKDCKHSNIVA--YFGSYL--RRDKLWICMEFCG   89 (267)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEecCchh------HHHHHHHHHHHHHhCCCCCeee--EEEEEE--eCCEEEEEEeccC
Confidence            99999999999999999999997653211      1224578899999999999974  444333  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   .+.+++.+++.++.|++.||.|||+.|++|+||||+||++    +..+.++|+|||++......  .
T Consensus        90 ~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          90 GGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL----TDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEECcceeeeEccCcccc
Confidence            9998776554   3468888999999999999999999999999999999999    77789999999998766432  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....|++.|+|||++.
T Consensus       163 ~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         163 RKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cccccCcccccChhhhc
Confidence            24567899999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0587|consensus

Probab=99.94  E-value=8.3e-28  Score=209.01  Aligned_cols=166  Identities=21%  Similarity=0.220  Sum_probs=136.6

Q ss_pred             cccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhh-hccccccccee
Q psy11822         50 NCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYA-HCNNVKASVQM  127 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~-~~~~~~~~~lv  127 (229)
                      ...|.+|.||+++...+++..|+|+......       ..+.++.|.++++.. .|||++...-+.+. ..+....+|+|
T Consensus        27 ig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-------~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV   99 (953)
T KOG0587|consen   27 IGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-------EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV   99 (953)
T ss_pred             EeeccceeEEEEeeeecCceeeeEeecCCcc-------ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence            3349999999999999999999999776321       122446677777776 79999854433332 23455679999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||||.+|+..++..... ...+.|+.+..|++.++.|+.+||.+.+||||||=.|||+    +.++.|||+|||.+..+.
T Consensus       100 MEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL----T~e~~VKLvDFGvSaQld  174 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD  174 (953)
T ss_pred             eeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE----eccCcEEEeeeeeeeeee
Confidence            99999999777777655 5679999999999999999999999999999999999999    888899999999999887


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      +.  ..++..|||.|||||++.
T Consensus       175 sT~grRnT~iGtP~WMAPEVia  196 (953)
T KOG0587|consen  175 STVGRRNTFIGTPYWMAPEVIA  196 (953)
T ss_pred             cccccccCcCCCcccccceeee
Confidence            65  567899999999999985

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=1.1e-27  Score=190.80  Aligned_cols=163  Identities=19%  Similarity=0.217  Sum_probs=133.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|++.+.....   ....+.+.+|+.++++++||||+  .+++.+.  +....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   82 (258)
T cd05578          10 KGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE---KGSVRNVLNERRILQELNHPFLV--NLWYSFQ--DEENMYLVVDLL   82 (258)
T ss_pred             cCCCceEEEEEEccCCcEEEEEEEehhhhcc---hhHHHHHHHHHHHHHhCCCCChH--HHHHhhc--CCCeEEEEEeCC
Confidence            3899999999999899999999987643221   12345678899999999999997  4554543  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      .++++...+...   ..+++.++..++.|+++||.|||+++++|+||+|+||++    +.++.++|+|||++...... .
T Consensus        83 ~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~~  155 (258)
T cd05578          83 LGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL----DEQGHVHITDFNIATKVTPDTL  155 (258)
T ss_pred             CCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----cCCCCEEEeecccccccCCCcc
Confidence            999987776652   368888899999999999999999999999999999999    77889999999998876543 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|+..|+|||++.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~  173 (258)
T cd05578         156 TTSTSGTPGYMAPEVLCR  173 (258)
T ss_pred             ccccCCChhhcCHHHHcc
Confidence            345678889999998764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.94  E-value=1.1e-27  Score=190.22  Aligned_cols=164  Identities=18%  Similarity=0.175  Sum_probs=130.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|.+......    ....+.+.+|+++++.++|||++  ..++++.  .....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   81 (256)
T cd08529          10 KGSFGVVFKVVRKADKRVYAMKQIDLSKMN----RREREEAIDEARVLAKLDSSYII--RYYESFL--DKGKLNIVMEYA   81 (256)
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEeehhhCC----HHHHHHHHHHHHHHHhcCCCCee--hheeeec--cCCEEEEEEEeC
Confidence            389999999999999999999987653222    12234568899999999999997  4444443  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++.... ...+++..+..++.|++.||.|||+.|++|+||||+||++    +.++.++|+|||+++.....  
T Consensus        82 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili----~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          82 ENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL----DAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----eCCCCEEEcccccceeccCccc
Confidence            9999777655421 2357778888999999999999999999999999999999    77789999999999876543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|++.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (256)
T cd08529         157 FANTIVGTPYYLSPELCED  175 (256)
T ss_pred             hhhccccCccccCHHHhcC
Confidence            2234578899999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=6.8e-28  Score=192.88  Aligned_cols=166  Identities=20%  Similarity=0.260  Sum_probs=130.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHH---HHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFID---LLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+++.+|+|.+......   ........+.+.+|+.+++.++||||+.  +++++.  .....+++|
T Consensus        10 ~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~   85 (267)
T cd06628          10 SGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQ--YLGSSL--DADHLNIFL   85 (267)
T ss_pred             cCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeee--EEEEEE--eCCccEEEE
Confidence            389999999999888999999987643221   1122334457789999999999999974  444443  334678999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..++..   ...+++..+..++.|++.||+|||++|++||||+|+||++    +.++.++|+|||.++....
T Consensus        86 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~----~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          86 EYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV----DNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE----cCCCCEEecccCCCccccc
Confidence            99999998777654   3457888888999999999999999999999999999999    7778999999999987753


Q ss_pred             c--------cccceeecccCCCCccccC
Q psy11822        209 A--------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .        ......|+..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~  186 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQ  186 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhcc
Confidence            2        1123467889999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-27  Score=192.64  Aligned_cols=161  Identities=25%  Similarity=0.305  Sum_probs=131.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.++.....    ....+.+.+|+++++.++|+||+  .+++++..  ....+++|||++
T Consensus        12 g~~~~v~~~~~~~~~~~v~vK~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~--~~~~~iv~e~~~   83 (288)
T cd07833          12 GAYGVVLKCRNKATGEIVAIKKFKESEDD----EDVKKTALREVKVLRQLRHENIV--NLKEAFRR--KGRLYLVFEYVE   83 (288)
T ss_pred             cCCeeEEEEEeCCCCcEEEEehhhhhccc----ccchhHHHHHHHHHHhcCCCCee--ehhheEEE--CCEEEEEEecCC
Confidence            89999999999999999999998753221    22345678899999999999997  56655543  445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..+...   ...+++.++..++.|++.||.|||+.+++|+||+|+||++    +.++.+||+|||++......   
T Consensus        84 ~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~----~~~~~~kl~d~g~~~~~~~~~~~  156 (288)
T cd07833          84 RTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV----SESGVLKLCDFGFARALRARPAS  156 (288)
T ss_pred             CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEEeeecccccCCCccc
Confidence            9877665444   2348888899999999999999999999999999999999    77889999999998876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......++..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~PE~~~~  175 (288)
T cd07833         157 PLTDYVATRWYRAPELLVG  175 (288)
T ss_pred             cccCcccccCCcCCchhcC
Confidence            2345678899999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.94  E-value=1e-27  Score=214.25  Aligned_cols=160  Identities=18%  Similarity=0.162  Sum_probs=128.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||||+++.....   .......+.+|+.+++.++|+||+.  ++..+.  ....+|+||||+.
T Consensus        15 G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~---~~~~~~~~~~E~~~l~~l~hp~Iv~--~~~~~~--~~~~~~lVmEy~~   87 (669)
T cd05610          15 GAFGKVYLGRKKNNSKLYAVKVVKKADMI---NKNMVHQVQAERDALALSKSPFIVH--LYYSLQ--SANNVYLVMEYLI   87 (669)
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEehhhcc---CHHHHHHHHHHHHHHHhcCCCCcCe--EEEEEE--ECCEEEEEEeCCC
Confidence            89999999999999999999998763221   1122346688999999999999974  333332  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +++|..++..   ...+++..++.++.||+.||.|||.++|+||||||+|||+    +..+.+||+|||+++.....  .
T Consensus        88 g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl----~~~g~vkL~DFGls~~~~~~~~~  160 (669)
T cd05610          88 GGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI----SNEGHIKLTDFGLSKVTLNRELN  160 (669)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE----cCCCCEEEEeCCCCccccCCccc
Confidence            9997776654   2357788889999999999999999999999999999999    77789999999999876543  3


Q ss_pred             ccceeecccCCCCccc
Q psy11822        211 CNTYLQSRYYRAPEII  226 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l  226 (229)
                      .....+|+.|++||..
T Consensus       161 ~~~~~~t~~~~~pe~~  176 (669)
T cd05610         161 MMDILTTPSMAKPKND  176 (669)
T ss_pred             ccccccCccccCcccc
Confidence            3457889999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=1.6e-27  Score=192.49  Aligned_cols=161  Identities=25%  Similarity=0.332  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+......    ....+.+.+|+++++.++||||+  .+++++.  .....++||||++
T Consensus        12 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   83 (286)
T cd07846          12 GSYGMVMKCKHKETGQIVAIKKFLESEDD----KMVKKIAMREIRMLKQLRHENLV--NLIEVFR--RKKRLYLVFEFVD   83 (286)
T ss_pred             CCCeEEEEEEECCCCCEEEEEeHhhccCc----chhhHHHHHHHHHHHhcCCcchh--hHHHhcc--cCCeEEEEEecCC
Confidence            88999999999889999999987653211    11233567899999999999997  5565554  4456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   ...+++.++..++.|++.||+|||+.+++|+||+|+||++    +.++.++|+|||++......  .
T Consensus        84 ~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~----~~~~~~~l~dfg~~~~~~~~~~~  156 (286)
T cd07846          84 HTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPGEV  156 (286)
T ss_pred             ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----CCCCcEEEEeeeeeeeccCCccc
Confidence            9887766544   2347888899999999999999999999999999999999    77889999999999876443  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       157 ~~~~~~~~~y~aPE~~~~  174 (286)
T cd07846         157 YTDYVATRWYRAPELLVG  174 (286)
T ss_pred             cCcccceeeccCcHHhcc
Confidence            234578899999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=8.6e-28  Score=195.25  Aligned_cols=159  Identities=24%  Similarity=0.272  Sum_probs=128.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||++.+..++..||||.+....      ....+.+.+|+.+++.++|+|++  .+++.+.  .....++||||+
T Consensus        32 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~e~~~l~~l~h~~ii--~~~~~~~--~~~~~~lv~e~~  101 (292)
T cd06658          32 EGSTGIVCIATEKHTGKQVAVKKMDLRK------QQRRELLFNEVVIMRDYHHENVV--DMYNSYL--VGDELWVVMEFL  101 (292)
T ss_pred             CCCCeEEEEEEECCCCCEEEEEEEecch------HHHHHHHHHHHHHHHhCCCCcHH--HHHHhee--cCCeEEEEEeCC
Confidence            4999999999998899999999876432      12234568899999999999997  4554443  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..    ..+++.++..++.|++.||.|||+++|+||||||+||++    +.++.++|+|||++......  
T Consensus       102 ~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill----~~~~~~kL~dfg~~~~~~~~~~  173 (292)
T cd06658         102 EGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL----TSDGRIKLSDFGFCAQVSKEVP  173 (292)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCEEEccCcchhhcccccc
Confidence            99998776543    357888899999999999999999999999999999999    77789999999998765332  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|++.|+|||++.+
T Consensus       174 ~~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         174 KRKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             cCceeecCccccCHHHHcc
Confidence            2244678999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG1035|consensus

Probab=99.94  E-value=3.1e-28  Score=217.67  Aligned_cols=168  Identities=20%  Similarity=0.166  Sum_probs=125.6

Q ss_pred             cccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----------
Q psy11822         50 NCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----------  119 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----------  119 (229)
                      .+.|+||.||+++.+-+|+.||||.++... .    ......+.+|+.++++|+|||+++++......+.          
T Consensus       487 LGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s----~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~  561 (1351)
T KOG1035|consen  487 LGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S----DKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS  561 (1351)
T ss_pred             hcCCCCceEEEEeecccchhhhhhhccCch-H----HHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence            334999999999999999999999988753 1    2233456899999999999999855411000000          


Q ss_pred             --------------------------------------------------------------------------------
Q psy11822        120 --------------------------------------------------------------------------------  119 (229)
Q Consensus       120 --------------------------------------------------------------------------------  119 (229)
                                                                                                      
T Consensus       562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~  641 (1351)
T KOG1035|consen  562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI  641 (1351)
T ss_pred             chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence                                                                                            


Q ss_pred             ------------------cc-------cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCc
Q psy11822        120 ------------------NV-------KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI  174 (229)
Q Consensus       120 ------------------~~-------~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~ii  174 (229)
                                        +.       ..+||=||||+..++..++..+.-..  ....++++++||++||+|+|+.|||
T Consensus       642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~~giI  719 (1351)
T KOG1035|consen  642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHDQGII  719 (1351)
T ss_pred             cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHhCcee
Confidence                              00       12466677777777776666522110  2456788999999999999999999


Q ss_pred             cccCCCCCeeeeCCCCCCccEEEeecCcceecC--------------------cccccceeecccCCCCccccC
Q psy11822        175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--------------------KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       175 HrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--------------------~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||||||.|||+    +....|||+|||+|....                    .+..+..+||.-|+|||++.+
T Consensus       720 HRDLKP~NIFL----d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  720 HRDLKPRNIFL----DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             eccCCcceeEE----cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            99999999999    788899999999998721                    012355799999999999865

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=1.4e-27  Score=193.60  Aligned_cols=160  Identities=23%  Similarity=0.242  Sum_probs=123.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|.+..+|+.||+|.+.....     ......+.+|+.+++.++|+||+.  +.+++.  .....++||||+.
T Consensus        16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~--~~~~~~--~~~~~~lv~e~~~   86 (291)
T cd07870          16 GSYATVYKGISRINGQLVALKVISMKTE-----EGVPFTAIREASLLKGLKHANIVL--LHDIIH--TKETLTFVFEYMH   86 (291)
T ss_pred             cCCEEEEEEEEcCCCcEEEEEEecccCc-----CCCcHHHHHHHHHHHhcCCCCEeE--EEEEEe--cCCeEEEEEeccc
Confidence            8999999999998999999999764311     111224468999999999999974  444443  3345789999997


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++.+..+...   ...+++.++..++.|++.||.|||+.+|+|+||||+||++    +..+.++|+|||+++.....  .
T Consensus        87 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          87 TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI----SYLGELKLADFGLARAKSIPSQT  159 (291)
T ss_pred             CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE----cCCCcEEEeccccccccCCCCCC
Confidence            6555544332   2346777788899999999999999999999999999999    77789999999998765332  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCccccccccCCceeec
Confidence            234567899999998854

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=6.7e-28  Score=193.07  Aligned_cols=167  Identities=20%  Similarity=0.223  Sum_probs=129.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..||+|.+....... ........+.+|+.+++.++||||+.  ..+++........+++|||+
T Consensus        12 ~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~~~~~~~~l~~e~~   88 (266)
T cd06651          12 QGAFGRVYLCYDVDTGRELAAKQVQFDPESP-ETSKEVSALECEIQLLKNLQHERIVQ--YYGCLRDRAEKTLTIFMEYM   88 (266)
T ss_pred             CCCCEEEEEEEEcCCCcEEEEEEeecCcCCc-hhHHHHHHHHHHHHHHHHcCCCCeee--EEEEEEcCCCCEEEEEEeCC
Confidence            3899999999999999999999876432111 11223446788999999999999974  44443333335678999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++...+..   ...+++...+.++.|++.||+|||+.+|+||||+|+||++    +.++.++|+|||++..+...  
T Consensus        89 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~----~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          89 PGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR----DSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCCCccccccccc
Confidence            99987766554   2347778888999999999999999999999999999999    77789999999999865431  


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......++..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~  183 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISG  183 (266)
T ss_pred             cCCccccCCccccccCHHHhCC
Confidence               1123568889999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=5.3e-27  Score=193.86  Aligned_cols=153  Identities=21%  Similarity=0.150  Sum_probs=114.7

Q ss_pred             CCceeeeeeecCC-CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLE-GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+.. +++.+|||.+..... ........+.+.+|+++|+.++|+|++. .+++.      ...|+||||+
T Consensus        29 G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~~~~E~~iL~~L~h~~iv~-~l~~~------~~~~LVmE~~  100 (365)
T PRK09188         29 DVFSTVERGYFAGDPGTARAVRRRVSEVP-WWSKPLARHLAAREIRALKTVRGIGVVP-QLLAT------GKDGLVRGWT  100 (365)
T ss_pred             cCcEEEEEEEEcCCCCeEEEEEEeccccc-ccccHHHHHHHHHHHHHHHhccCCCCCc-EEEEc------CCcEEEEEcc
Confidence            9999999998876 688889998643210 0001122346799999999999999863 22221      2358999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccC-CCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADL-KPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDl-kp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++|... ..   ..      ...++.|+++||.|||++||+|||| ||+|||+    +.++.+||+|||+|+.+....
T Consensus       101 ~G~~L~~~-~~---~~------~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv----~~~~~ikLiDFGlA~~~~~~~  166 (365)
T PRK09188        101 EGVPLHLA-RP---HG------DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM----GPDGEAAVIDFQLASVFRRRG  166 (365)
T ss_pred             CCCCHHHh-Cc---cc------hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE----cCCCCEEEEECccceecccCc
Confidence            99987532 11   01      1468999999999999999999999 9999999    667799999999999775431


Q ss_pred             ----------ccceeecccCCCCcccc
Q psy11822        211 ----------CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ----------~~~~~gt~~y~aPE~l~  227 (229)
                                ..+..+++.|+|||.+.
T Consensus       167 ~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        167 ALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             chhhhhhhhhhhhhhccCccCCcccCC
Confidence                      13567888899999874

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=1.8e-27  Score=189.98  Aligned_cols=163  Identities=24%  Similarity=0.245  Sum_probs=131.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|++.+.....   ....+.+.+|+.+++.++||||+  .+++.+.  +....+++|||+
T Consensus         3 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   75 (262)
T cd05572           3 VGGFGRVELVKVKSKNRTFALKCVKKRHIVE---TGQQEHIFSEKEILEECNHPFIV--KLYRTFK--DKKYIYMLMEYC   75 (262)
T ss_pred             CCCceEEEEEEECCCCcEEEEEEEehhcchh---hhHHHHHHHHHHHHHhCCCCCEe--eeeeeEE--cCCccEEEEecC
Confidence            4889999999999899999999987643221   12234678899999999999997  4454443  335679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      +++++..++..   ...+++..+..++.|+++||+|||+.+++|+||+|+||++    +.++.++|+|||++...... .
T Consensus        76 ~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv----~~~~~~~l~df~~~~~~~~~~~  148 (262)
T cd05572          76 LGGELWTILRD---RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL----DSNGYVKLVDFGFAKKLKSGQK  148 (262)
T ss_pred             CCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----cCCCCEEEeeCCcccccCcccc
Confidence            99998777655   2347888889999999999999999999999999999999    77889999999999877543 2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       149 ~~~~~~~~~~~~PE~~~~  166 (262)
T cd05572         149 TWTFCGTPEYVAPEIILN  166 (262)
T ss_pred             cccccCCcCccChhHhcC
Confidence            334678899999998754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=1.3e-27  Score=192.60  Aligned_cols=165  Identities=18%  Similarity=0.161  Sum_probs=129.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|.+......   .......+.+|+.+++.++|||++.  +.+.+.  .....++||||+
T Consensus         3 ~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~   75 (277)
T cd05577           3 KGGFGEVCACQVKATGKMYACKKLDKKRLK---KRKGEQMALNEKKILEKVSSRFIVS--LAYAFE--TKDDLCLVMTLM   75 (277)
T ss_pred             CCCceeEEEEEEcCCCcEEEEEEEehhhhh---hhhhhHHHHHHHHHHHhCCCCCEee--eeeEEe--cCCeEEEEEecC
Confidence            488999999999999999999998764322   1222334567999999999999974  333333  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      +++++...+..... ..+++.++..++.|++.||.|||++|++||||+|+||++    +.++.++|+|||.+...... .
T Consensus        76 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~  150 (277)
T cd05577          76 NGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL----DDHGNVRISDLGLAVELKGGKK  150 (277)
T ss_pred             CCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEccCcchhhhccCCc
Confidence            99998766544222 358888889999999999999999999999999999999    77789999999998766432 2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       151 ~~~~~~~~~y~~PE~~~~  168 (277)
T cd05577         151 IKGRAGTPGYMAPEVLQG  168 (277)
T ss_pred             cccccCCCCcCCHHHhcC
Confidence            234567889999999765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0695|consensus

Probab=99.94  E-value=2.1e-27  Score=188.07  Aligned_cols=171  Identities=19%  Similarity=0.191  Sum_probs=138.6

Q ss_pred             cceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccc
Q psy11822         45 RKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKA  123 (229)
Q Consensus        45 ~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~  123 (229)
                      +-.++.+.|+|+.|.++++..|.+.||+|+++++..++...   ++-++.|-.+.... +||+++  .+...+.  +...
T Consensus       253 ~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndded---idwvqtek~vfe~asn~pflv--glhscfq--tesr  325 (593)
T KOG0695|consen  253 DLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDED---IDWVQTEKHVFEQASNNPFLV--GLHSCFQ--TESR  325 (593)
T ss_pred             eeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCccc---chhHHhhHHHHHhccCCCeEE--ehhhhhc--ccce
Confidence            33444445999999999999999999999999976654332   23345566666554 799886  4554444  4456


Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +++|.||++||+|......   .++++++.++.+...|+-||.|||+.|||.||||.+|+|+    +.+|++||.|+|.+
T Consensus       326 lffvieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll----daeghikltdygmc  398 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL----DAEGHIKLTDYGMC  398 (593)
T ss_pred             EEEEEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE----ccCCceeecccchh
Confidence            8999999999997666555   5679999999999999999999999999999999999999    99999999999999


Q ss_pred             eecC--cccccceeecccCCCCccccCC
Q psy11822        204 SHVS--KAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       204 ~~~~--~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      +.--  .+..++.||||.|.|||+|+|+
T Consensus       399 ke~l~~gd~tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             hcCCCCCcccccccCCCcccchhhhccc
Confidence            8653  3356789999999999999985

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=8.3e-28  Score=192.36  Aligned_cols=167  Identities=19%  Similarity=0.215  Sum_probs=130.8

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+++.||+|+++.............+.+.+|+.+++.++|+||+  ..++++.  .....++||||
T Consensus         9 g~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~~v~e~   84 (268)
T cd06630           9 GTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII--RMLGATC--EDSHFNLFVEW   84 (268)
T ss_pred             cCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCcee--hhhceec--cCCeEEEEEec
Confidence            3499999999999999999999998753221111122345778999999999999997  4555543  33467899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~~~~  209 (229)
                      ++++++..++..   ...+++..+..++.|++.||.|||++|++|+||+|+||++    +..+ .++|+|||.+......
T Consensus        85 ~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~----~~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          85 MAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI----DSTGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             cCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEEcccccccccccc
Confidence            999998777654   2357888889999999999999999999999999999999    5443 6999999999876542


Q ss_pred             c------ccceeecccCCCCccccC
Q psy11822        210 V------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~------~~~~~gt~~y~aPE~l~~  228 (229)
                      .      .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~  182 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRG  182 (268)
T ss_pred             cccCCccccccccccceeCHhHhcc
Confidence            1      123568889999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=1.6e-27  Score=189.92  Aligned_cols=163  Identities=23%  Similarity=0.220  Sum_probs=130.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+|+.+|+|++.......   ....+.+.+|+++++.++||||+.  +.+.+.  .....|++|||+
T Consensus         3 ~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~--~~~~~~--~~~~~~lv~e~~   75 (265)
T cd05579           3 KGAYGRVFLAKKKSTGDIYAIKVIKKADMIR---KNQVDQVLTERDILSQAQSPYVVK--LYYSFQ--GKKNLYLVMEYL   75 (265)
T ss_pred             CCCceEEEEEEECCCCCEEEEEEecchhhhh---hhHHHHHHHHHHHHHhCCCcchhH--HHHhee--cCcEEEEEEecC
Confidence            4899999999999899999999987643321   233456788999999999999973  444433  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..   ...+++..+..++.|+++||+|||+.+++|+||+|+||++    +.++.++|+|||++......  
T Consensus        76 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~----~~~~~~~l~dfg~~~~~~~~~~  148 (265)
T cd05579          76 PGGDLASLLEN---VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI----DSNGHLKLTDFGLSKVGLVRRQ  148 (265)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE----cCCCCEEEEecccchhcccCcc
Confidence            99998776654   2358888899999999999999999999999999999999    77889999999998765432  


Q ss_pred             --------cccceeecccCCCCccccC
Q psy11822        210 --------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --------~~~~~~gt~~y~aPE~l~~  228 (229)
                              ......++..|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~  175 (265)
T cd05579         149 INLNDDEKEDKRIVGTPDYIAPEVILG  175 (265)
T ss_pred             cccccccccccCcccCccccCHHHhcC
Confidence                    2234578889999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.94  E-value=1.8e-27  Score=189.33  Aligned_cols=162  Identities=18%  Similarity=0.209  Sum_probs=127.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||++.+..+++.+|+|.++....     ....+.+.+|+.+++.++|+|++  .+.+.+.  .....+++|||++
T Consensus        11 g~~g~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   81 (255)
T cd08219          11 GSFGRALLVQHVNSDQKYAMKEIRLPKS-----SSAVEDSRKEAVLLAKMKHPNIV--AFKESFE--ADGHLYIVMEYCD   81 (255)
T ss_pred             cCCeEEEEEEEcCCCceEEEEEEEcCcc-----hHHHHHHHHHHHHHHhCCCCCcc--eEEEEEE--ECCEEEEEEeeCC
Confidence            8899999999999999999998754211     11233557888999999999997  4444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++........ ...+++..+..++.|++.||.|||++||+|+||||+||++    +.++.++|+|||++......  .
T Consensus        82 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          82 GGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL----TQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             CCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----CCCCcEEEcccCcceeecccccc
Confidence            998655543211 2347788889999999999999999999999999999999    77789999999999876543  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219         157 ACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             cccccCCccccCHHHHcc
Confidence            234678899999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=1.2e-27  Score=193.30  Aligned_cols=161  Identities=20%  Similarity=0.167  Sum_probs=124.4

Q ss_pred             CCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||++.    ...++..||+|.++.....     .....+.+|+.+++.++||||+.  +.+++.......++++|
T Consensus        15 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~lv~   87 (283)
T cd05080          15 GHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-----QNTSGWKKEINILKTLYHENIVK--YKGCCSEQGGKGLQLIM   87 (283)
T ss_pred             CCCcEEEEeeEccccCCCCceEEEEEeccccCh-----HHHHHHHHHHHHHHhCCCCCEee--EEEEEecCCCceEEEEe
Confidence            8999998764    3456889999998753211     12335678999999999999974  44443333334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..+...    ..+++.+++.++.|++.||.|||+++|+||||||+||++    +.++.++|+|||+++....
T Consensus        88 e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          88 EYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             cCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE----cCCCcEEEeecccccccCC
Confidence            99999998777654    358889999999999999999999999999999999999    7778999999999987654


Q ss_pred             ccc-----cceeecccCCCCccccC
Q psy11822        209 AVC-----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~-----~~~~gt~~y~aPE~l~~  228 (229)
                      ...     ....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~  184 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKE  184 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcc
Confidence            321     22345567999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=1e-27  Score=195.28  Aligned_cols=160  Identities=23%  Similarity=0.250  Sum_probs=129.4

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+..+++.||+|.+....      ....+.+.+|+.+++.+.|||++  .+++.+.  .....+++|||
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~------~~~~~~~~~e~~~l~~l~hp~i~--~~~~~~~--~~~~~~iv~e~   99 (297)
T cd06659          30 GEGSTGIVCIAREKHSGRQVAVKMMDLRK------QQRRELLFNEVVIMRDYQHQNVV--EMYKSYL--VGEELWVLMEF   99 (297)
T ss_pred             CCCCceeEEEEEEcCCCCEEEEEEEEecc------cchHHHHHHHHHHHHhCCCCchh--hhhhhee--eCCeEEEEEec
Confidence            34899999999998899999999986421      11233567899999999999997  4555443  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++..+...    ..+++..+..++.|++.||.|||+.+++||||||+||++    +.++.++|+|||++...... 
T Consensus       100 ~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill----~~~~~~kL~dfg~~~~~~~~~  171 (297)
T cd06659         100 LQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDV  171 (297)
T ss_pred             CCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE----ccCCcEEEeechhHhhccccc
Confidence            999997766543    357888889999999999999999999999999999999    77889999999998765443 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|+..|+|||++.+
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~  191 (297)
T cd06659         172 PKRKSLVGTPYWMAPEVISR  191 (297)
T ss_pred             ccccceecCccccCHHHHcc
Confidence             2345678999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=1.2e-27  Score=191.91  Aligned_cols=161  Identities=22%  Similarity=0.282  Sum_probs=126.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccc----cccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNN----VKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~----~~~~~lv  127 (229)
                      |+||.||+|.+..+++.||+|.+....       .....+.+|+.+++.+ +|+|++.  +.+++....    ....+++
T Consensus        17 g~~g~vy~~~~~~~~~~~aik~~~~~~-------~~~~~~~~e~~~l~~~~~h~~i~~--~~~~~~~~~~~~~~~~~~iv   87 (272)
T cd06637          17 GTYGQVYKGRHVKTGQLAAIKVMDVTG-------DEEEEIKQEINMLKKYSHHRNIAT--YYGAFIKKNPPGMDDQLWLV   87 (272)
T ss_pred             cCCeEEEEEEEcCCCcEEEEEEEEcCC-------ccHHHHHHHHHHHHHhcCCCCeee--EeeEEeecCCCCCCcEEEEE
Confidence            899999999999999999999976431       1223457788888888 7999974  444432211    2357899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+.++++..+..... ...+++..+..++.|++.||+|||+++|+||||||+||++    +.++.++|+|||++....
T Consensus        88 ~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili----~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637          88 MEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             EEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE----CCCCCEEEccCCCceecc
Confidence            99999999766655422 2357888888999999999999999999999999999999    777899999999998764


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ..  ......|++.|+|||++.
T Consensus       163 ~~~~~~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         163 RTVGRRNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             cccccCCcccccccccCHhHhc
Confidence            32  334568899999999985

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.94  E-value=1.9e-27  Score=192.24  Aligned_cols=162  Identities=21%  Similarity=0.212  Sum_probs=125.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhh---cccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAH---CNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~---~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.+|+|++.....       ....+.+|+.+++.+ +|||++.  +++++.   ..+....++||
T Consensus        29 g~~~~vy~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~e~~~l~~l~~h~~i~~--~~~~~~~~~~~~~~~~~lv~   99 (286)
T cd06638          29 GTYGKVFKVLNKKNGSKAAVKILDPIHD-------IDEEIEAEYNILKALSDHPNVVK--FYGMYYKKDVKNGDQLWLVL   99 (286)
T ss_pred             CCCcEEEEEEECCCCceeEEEeeccccc-------hHHHHHHHHHHHHHHhcCCCeee--eeeeeeecccCCCCeEEEEE
Confidence            8899999999999999999998764211       123457788888888 6999984  443331   12334579999


Q ss_pred             eeeeCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||+++++|..++.. ......+++..+..++.|++.||.|||+.+++||||||+||++    +..+.++|+|||++....
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638         100 ELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL----TTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             eecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE----CCCCCEEEccCCceeecc
Confidence            99999997665432 1112357777888999999999999999999999999999999    777789999999998764


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ..  ......|++.|+|||++.
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         176 STRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             cCCCccccccCCCcccChhhhc
Confidence            42  224467899999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=2.1e-27  Score=188.86  Aligned_cols=164  Identities=16%  Similarity=0.124  Sum_probs=132.3

Q ss_pred             cCCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+...   +..||+|.++......     ..+.+.+|++.++.++|+|++.  .++++.  +....++||
T Consensus         5 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~--~~~~~~--~~~~~~lv~   75 (262)
T cd00192           5 EGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-----ERKDFLKEARVMKKLGHPNVVR--LLGVCT--EEEPLYLVL   75 (262)
T ss_pred             cCCceEEEEEEEecCCCCCceEEeEeeccccchh-----HHHHHHHHHHHHhhcCCCChhe--eeeeec--CCCceEEEE
Confidence            489999999998865   8999999987643221     3456789999999999999974  343333  245679999


Q ss_pred             eeeeCCCCCccCCCCCC------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        129 EVTRRSQYTGATAPPPP------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ||++++++..++.....      ...+++.+++.++.|++.||.|||+++++||||+|+||++    +.++.++|+|||.
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili----~~~~~~~l~dfg~  151 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV----GEDLVVKISDFGL  151 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE----CCCCcEEEccccc
Confidence            99999997777665311      2568899999999999999999999999999999999999    7778999999999


Q ss_pred             ceecCcc----cccceeecccCCCCccccC
Q psy11822        203 ASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      +......    ......+++.|+|||++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (262)
T cd00192         152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKD  181 (262)
T ss_pred             ccccccccccccccCCCcCccccCHHHhcc
Confidence            9877553    2345667889999998764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=1.6e-27  Score=198.65  Aligned_cols=160  Identities=27%  Similarity=0.386  Sum_probs=123.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|.+......    ......+.+|+.+++.++|+||+.  +++++...    +....|+||
T Consensus        27 g~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~lv~  100 (353)
T cd07850          27 GAQGIVCAAYDTVTGQNVAIKKLSRPFQN----VTHAKRAYRELVLMKLVNHKNIIG--LLNVFTPQKSLEEFQDVYLVM  100 (353)
T ss_pred             CCCEEEEEEEECCCCCEEEEEecCccccC----hhHHHHHHHHHHHHHhcCCCCCcc--eeeeeccCCCccccCcEEEEE
Confidence            89999999999999999999988653211    112234567999999999999973  44333211    223468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.++....+ ..     .+++..+..++.|++.||+|||+.||+||||||+||++    +.++.+||+|||+++....
T Consensus       101 e~~~~~l~~~~-~~-----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850         101 ELMDANLCQVI-QM-----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             eccCCCHHHHH-hh-----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEccCccceeCCC
Confidence            99976443333 22     27777888999999999999999999999999999999    7888999999999987754


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......+++.|+|||++.+
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~  191 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEVILG  191 (353)
T ss_pred             CCCCCCCcccccccCHHHHhC
Confidence            3 2234578899999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=1.9e-27  Score=190.12  Aligned_cols=166  Identities=17%  Similarity=0.165  Sum_probs=130.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|.++.....   .....+.+.+|+++++.++|+|++  ..++.+..  ....++||||+
T Consensus        12 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~ei~~l~~~~~~~i~--~~~~~~~~--~~~~~lv~e~~   84 (267)
T cd08224          12 KGQFSVVYKAICLLDGRVVALKKVQIFEMM---DAKARQDCLKEIDLLKQLDHPNVI--KYLASFIE--NNELNIVLELA   84 (267)
T ss_pred             cCCceEEEEEEEcCCCCEEEEEEeeccccc---chhhHHHHHHHHHHHHhCCCCCee--eeeeeeec--CCeEEEEEecC
Confidence            389999999999989999999987642211   122344678999999999999997  44444432  34579999999


Q ss_pred             eCCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++..++... .....+++..+..++.|++.||.|||+.|++||||+|+||++    +.++.++|+|||++...... 
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~----~~~~~~~l~d~~~~~~~~~~~  160 (267)
T cd08224          85 DAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             CCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE----CCCCcEEEeccceeeeccCCC
Confidence            999976654321 123457888889999999999999999999999999999999    77889999999998866442 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|++.|+|||.+.+
T Consensus       161 ~~~~~~~~~~~y~apE~~~~  180 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             cccceecCCccccCHHHhcc
Confidence             2234678899999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=1.4e-27  Score=192.74  Aligned_cols=162  Identities=27%  Similarity=0.325  Sum_probs=129.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|..||+|++......    ......+.+|+.+++.++|||++  .+++++.  .....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~~v~e~~   81 (286)
T cd07832          10 EGAHGIVFKAKDRETGETVALKKVALRRLE----GGIPNQALREIKALQACQHPYVV--KLLDVFP--HGSGFVLVMEYM   81 (286)
T ss_pred             cCCCcEEEEEEECCCCceEEEEEEEccccc----chhhHHHHHHHHHHHhCCCCCCc--ceeeEEe--cCCeeEEEeccc
Confidence            389999999999889999999998754221    11233568899999999999997  4454443  244679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                       ++++........  ..+++.+++.++.|++.||.|||+.+++|+||||+||++    +..+.++|+|||++....... 
T Consensus        82 -~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~----~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          82 -PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI----SADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             -CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE----cCCCcEEEeeeeecccccCCCC
Confidence             888665543311  358888899999999999999999999999999999999    777899999999998775432 


Q ss_pred             --ccceeecccCCCCccccC
Q psy11822        211 --CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 --~~~~~gt~~y~aPE~l~~  228 (229)
                        .....|+..|+|||++.+
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~  174 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYG  174 (286)
T ss_pred             CccccccCcccccCceeeec
Confidence              345678999999998754

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-27  Score=192.89  Aligned_cols=159  Identities=23%  Similarity=0.232  Sum_probs=128.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|.+..++..+|+|.+.....      ...+.+.+|+.+++.++|||++  .+++.+.  .....++||||++
T Consensus        16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   85 (280)
T cd06611          16 GAFGKVYKAQHKETGLFAAAKIIQIESE------EELEDFMVEIDILSECKHPNIV--GLYEAYF--YENKLWILIEFCD   85 (280)
T ss_pred             CCCceEEEEEEcCCCcEEEEEEEeeCCH------HHHHHHHHHHHHHHhCCCCcee--EEEEEEe--cCCeEEEEeeccC
Confidence            8899999999988999999999764321      1233567899999999999997  4444443  3446799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+....  ...+++.+++.++.|++.||.|||+.+|+|+||||+||++    +.++.++|+|||++......  .
T Consensus        86 ~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          86 GGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL----TLDGDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             CCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----CCCCCEEEccCccchhhcccccc
Confidence            99987775542  2358888999999999999999999999999999999999    77889999999998765432  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....|++.|+|||++.
T Consensus       160 ~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         160 RDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             cceeecchhhcCHHHHh
Confidence            34567899999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=2.1e-27  Score=193.29  Aligned_cols=158  Identities=22%  Similarity=0.246  Sum_probs=129.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+....      ....+.+.+|+.+++.++|||++  .+++++.  .....++||||++
T Consensus        30 g~~g~vy~~~~~~~~~~v~iK~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   99 (296)
T cd06655          30 GASGTVFTAIDVATGQEVAIKQINLQK------QPKKELIINEILVMKELKNPNIV--NFLDSFL--VGDELFVVMEYLA   99 (296)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEeccc------CchHHHHHHHHHHHHhcCCCcee--eeeeeEe--cCceEEEEEEecC
Confidence            899999999999999999999876421      22234568899999999999997  4454443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++.++..++.|++.||.|||+.|++|+||||+||++    +.++.++|+|||++......  .
T Consensus       100 ~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655         100 GGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL----GMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             CCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccchhccccccc
Confidence            9998777654    358888999999999999999999999999999999999    77789999999998866443  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||.+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTR  189 (296)
T ss_pred             CCCcCCCccccCcchhcC
Confidence            234578899999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=1.2e-27  Score=198.12  Aligned_cols=164  Identities=18%  Similarity=0.140  Sum_probs=120.6

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|.+.     .+++.||+|+++.....     ...+.+.+|+.++..+ .|+||+.  +++.+.. ....+++
T Consensus        18 G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-----~~~~~~~~E~~~~~~l~~h~niv~--~~~~~~~-~~~~~~~   89 (337)
T cd05054          18 GAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA-----SEYKALMTELKILIHIGHHLNVVN--LLGACTK-PGGPLMV   89 (337)
T ss_pred             CcCceEEeccccccccccccceeeeeeccCCCCH-----HHHHHHHHHHHHHHhhccCcchhh--eeeeEec-CCCCEEE
Confidence            999999999743     34689999988643211     1123457789999999 8999974  4433322 2345789


Q ss_pred             eeeeeeCCCCCccCCCCCC----------------------------------------------------------CCc
Q psy11822        127 MMEVTRRSQYTGATAPPPP----------------------------------------------------------AQV  148 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~----------------------------------------------------------~~~  148 (229)
                      +|||++++++..++.....                                                          ...
T Consensus        90 v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (337)
T cd05054          90 IVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEP  169 (337)
T ss_pred             EEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcC
Confidence            9999999987555432110                                                          124


Q ss_pred             cccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc----cccceeecccCCCCc
Q psy11822        149 LVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPE  224 (229)
Q Consensus       149 l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE  224 (229)
                      +++..+..++.|++.||+|||+++|+||||||+||++    +.++.++|+|||++..+...    ......++..|+|||
T Consensus       170 l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill----~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----eCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            6667778899999999999999999999999999999    77789999999999876432    122345567899999


Q ss_pred             cccC
Q psy11822        225 IILG  228 (229)
Q Consensus       225 ~l~~  228 (229)
                      ++.+
T Consensus       246 ~~~~  249 (337)
T cd05054         246 SIFD  249 (337)
T ss_pred             HhcC
Confidence            8754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=1.4e-27  Score=193.80  Aligned_cols=163  Identities=23%  Similarity=0.275  Sum_probs=127.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|.+..+++.+|+|.++.....    ......+.+|+.++++++||||+  .+.+++...+....|+||||++
T Consensus        16 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~h~ni~--~~~~~~~~~~~~~~~lv~e~~~   89 (293)
T cd07843          16 GTYGVVYRARDKKTGEIVALKKLKMEKEK----EGFPITSLREINILLKLQHPNIV--TVKEVVVGSNLDKIYMVMEYVE   89 (293)
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEeecccc----ccchhhHHHHHHHHHhcCCCCEE--EEEEEEEecCCCcEEEEehhcC
Confidence            88999999999989999999998753221    11222456799999999999997  4444444333356899999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      + ++..+....  ...+++.+++.++.|++.||+|||+++++|+||||+||++    +.++.++|+|||++......  .
T Consensus        90 ~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  162 (293)
T cd07843          90 H-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL----NNRGILKICDFGLAREYGSPLKP  162 (293)
T ss_pred             c-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCcEEEeecCceeeccCCccc
Confidence            6 444333321  1258888999999999999999999999999999999999    77889999999999877553  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||.+.+
T Consensus       163 ~~~~~~~~~~~aPE~~~~  180 (293)
T cd07843         163 YTQLVVTLWYRAPELLLG  180 (293)
T ss_pred             cccccccccccCchhhcC
Confidence            344677889999998754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=3.4e-27  Score=189.36  Aligned_cols=166  Identities=19%  Similarity=0.211  Sum_probs=130.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHH----HHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLL----KRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.+..+|+.+|+|.++.......    ......+.+.+|+.+++.++|||++.  +++++.  .....++|
T Consensus        11 ~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv   86 (272)
T cd06629          11 KGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ--YLGFET--TEEYLSIF   86 (272)
T ss_pred             ccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce--EEEEec--cCCceEEE
Confidence            38999999999988999999998764322111    11223456788999999999999974  444443  33467899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++++++...+...   ..+++..+..++.|++.||.|||+++++||||+|+||++    +.++.++|+|||++....
T Consensus        87 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          87 LEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV----DADGICKISDFGISKKSD  159 (272)
T ss_pred             EecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE----cCCCeEEEeecccccccc
Confidence            9999999987766552   457888888999999999999999999999999999999    778899999999998654


Q ss_pred             cc----cccceeecccCCCCccccC
Q psy11822        208 KA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..    ......|+..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~  184 (272)
T cd06629         160 DIYDNDQNMSMQGSVFWMAPEVIHS  184 (272)
T ss_pred             ccccccccccccCCccccCHHHhcc
Confidence            32    1234578889999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.94  E-value=1.8e-27  Score=189.84  Aligned_cols=161  Identities=17%  Similarity=0.138  Sum_probs=123.4

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+.  .++..||+|++.....     ....+.+.+|+.+++.++||||+.  +++.+.   ....++|||
T Consensus         5 ~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~ii~--~~~~~~---~~~~~lv~e   74 (257)
T cd05115           5 SGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-----KSVRDEMMREAEIMHQLDNPYIVR--MIGVCE---AEALMLVME   74 (257)
T ss_pred             CCCcccEEEEEEecCCCceeEEEEEcccccC-----hHHHHHHHHHHHHHHhcCCCCeEE--EEEEEc---CCCeEEEEE
Confidence            4899999999765  4466799998865321     122346789999999999999974  444332   235689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++..++...  ...+++..++.++.|++.||.|||++|++||||||+||++    +.++.+||+|||++......
T Consensus        75 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          75 MASGGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL----VNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             eCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE----cCCCcEEeccCCccccccCC
Confidence            99999977665431  2358888899999999999999999999999999999999    77789999999999866432


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+++.|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05115         149 DSYYKARSAGKWPLKWYAPECINF  172 (257)
T ss_pred             ccceeccCCCCCCcccCCHHHHcc
Confidence            1     112233567999998754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.94  E-value=1.4e-27  Score=194.39  Aligned_cols=158  Identities=20%  Similarity=0.222  Sum_probs=127.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+.....      ...+.+.+|+.+++.+.|+|++  .+++.+.  .....++||||++
T Consensus        31 g~~~~v~~~~~~~~~~~v~ik~~~~~~~------~~~~~~~~e~~~l~~~~h~~v~--~~~~~~~--~~~~~~lv~e~~~  100 (296)
T cd06654          31 GASGTVYTAMDVATGQEVAIRQMNLQQQ------PKKELIINEILVMRENKNPNIV--NYLDSYL--VGDELWVVMEYLA  100 (296)
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhCCCCCEe--eEEEEEE--eCCEEEEeecccC
Confidence            8899999999988999999998765321      1223567889999999999997  4444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++.++..++.|++.||.|||+.||+||||||+||++    +.++.++|+|||++......  .
T Consensus       101 ~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill----~~~~~~kl~dfg~~~~~~~~~~~  172 (296)
T cd06654         101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  172 (296)
T ss_pred             CCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEECccccchhccccccc
Confidence            9998777643    347778889999999999999999999999999999999    77789999999998765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||.+.+
T Consensus       173 ~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         173 RSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             cCcccCCccccCHHHHcC
Confidence            234578899999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=1.9e-27  Score=189.23  Aligned_cols=162  Identities=14%  Similarity=0.017  Sum_probs=123.2

Q ss_pred             ccCCceeeeeeecCCCC----------cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc
Q psy11822         51 CLDDIGQVNVPTDLEGG----------ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN  120 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~----------~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~  120 (229)
                      +.|+||.||+|.+..++          ..+++|.+......       ...+.+|+.+++.++||||+.  +++++..  
T Consensus         4 g~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~--~~~~~~~--   72 (259)
T cd05037           4 GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-------SLAFFETASLMSQLSHKHLVK--LYGVCVR--   72 (259)
T ss_pred             cccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-------HHHHHHHHHHHHcCCCcchhh--eeeEEec--
Confidence            34899999999998766          45888887653211       345688899999999999974  3433322  


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC---CCCccEEE
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV---RQPYRVKV  197 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~---~~~~~~kl  197 (229)
                       ...++||||++++++..++.....  .+++..+..++.|++.||+|||+++|+||||||+||++....   .....+||
T Consensus        73 -~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl  149 (259)
T cd05037          73 -DENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKL  149 (259)
T ss_pred             -CCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEe
Confidence             346899999999998777654221  577788899999999999999999999999999999994321   01127999


Q ss_pred             eecCcceecCcccccceeecccCCCCccccC
Q psy11822        198 IDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       198 ~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +|||++......  ....++..|+|||++.+
T Consensus       150 ~Dfg~a~~~~~~--~~~~~~~~y~aPE~~~~  178 (259)
T cd05037         150 SDPGIPITVLSR--EERVERIPWIAPECIRN  178 (259)
T ss_pred             CCCCcccccccc--cccccCCCccChhhhcC
Confidence            999999876542  34566778999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.94  E-value=2.9e-27  Score=190.95  Aligned_cols=159  Identities=21%  Similarity=0.264  Sum_probs=127.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|.+.....      .....+.+|+.+++.+.|||++  .+++++.  .....++||||++
T Consensus        16 g~~g~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~ii--~~~~~~~--~~~~~~~v~e~~~   85 (282)
T cd06643          16 GAFGKVYKAQNKETGVLAAAKVIDTKSE------EELEDYMVEIDILASCDHPNIV--KLLDAFY--YENNLWILIEFCA   85 (282)
T ss_pred             CCCeEEEEEEECCCCeEEEEEEeCCCCH------HHHHHHHHHHHHHHHCCCCCee--eEEEEEe--eCCEEEEEEEecC
Confidence            8899999999999999999998764321      1233567899999999999997  4444443  2345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++.......  ...+++..+..++.|++.||.|||+.|++||||||+||++    +.++.++|+|||++......  .
T Consensus        86 ~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili----~~~~~~kl~dfg~~~~~~~~~~~  159 (282)
T cd06643          86 GGAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNTRTIQR  159 (282)
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----ccCCCEEEccccccccccccccc
Confidence            99976654321  2358888899999999999999999999999999999999    77789999999998765432  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....|++.|+|||++.
T Consensus       160 ~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         160 RDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             cccccccccccCHhhcc
Confidence            24467899999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.94  E-value=2.2e-27  Score=191.49  Aligned_cols=163  Identities=17%  Similarity=0.181  Sum_probs=123.7

Q ss_pred             CCceeeeeeecCCCC-----cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGG-----ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+...+     ..||+|.++....     ......+.+|+.+++.++||||+.  +++++.  .....+++
T Consensus        16 G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-----~~~~~~~~~ei~~l~~l~h~~i~~--~~~~~~--~~~~~~~~   86 (283)
T cd05048          16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAE-----PKVQQEFRQEAELMSDLQHPNIVC--LLGVCT--KEQPTCML   86 (283)
T ss_pred             ccCCcEEEEEEecCCCCcceeeEEEEecccCCC-----HHHHHHHHHHHHHHHhcCCcccce--EEEEEc--CCCceEEE
Confidence            899999999875544     6899998865321     122345788999999999999974  444433  33457899


Q ss_pred             eeeeeCCCCCccCCCCCC-------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        128 MEVTRRSQYTGATAPPPP-------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      |||++++++..++.....             ...+++.++..++.|++.||.|||+++++||||||+||++    +.++.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~----~~~~~  162 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV----GEGLT  162 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE----cCCCc
Confidence            999999987655443211             1346666778899999999999999999999999999999    77789


Q ss_pred             EEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++|+|||++......    ......+++.|+|||++.+
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY  200 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhcc
Confidence            999999999866432    1234566788999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.94  E-value=2e-27  Score=189.34  Aligned_cols=161  Identities=16%  Similarity=0.170  Sum_probs=124.6

Q ss_pred             cCCceeeeeeec--CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTD--LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+  ..++..+|+|+++.....    ....+.+.+|+.+++.+.||||+.  ++++..   ....++|||
T Consensus         5 ~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~---~~~~~lv~e   75 (257)
T cd05116           5 SGNFGTVKKGMYKMKKSEKTVAVKILKNDNND----PALKDELLREANVMQQLDNPYIVR--MIGICE---AESWMLVME   75 (257)
T ss_pred             CcCCcceEEeEEecCCCceEEEEEEccCCCCc----HHHHHHHHHHHHHHHhCCCCCcce--EEEEEc---CCCcEEEEe
Confidence            489999999964  456889999998653221    123446788999999999999974  444432   234689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++..++..   ...+++..+..++.|++.||+|||++||+||||||+||++    +.++.+||+|||++......
T Consensus        76 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill----~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          76 LAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL----VTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE----cCCCeEEECCCccccccCCC
Confidence            9999997766554   2358888899999999999999999999999999999999    77789999999999876443


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+++.|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05116         149 ENYYKAKTHGKWPVKWYAPECMNY  172 (257)
T ss_pred             CCeeeecCCCCCCccccCHhHhcc
Confidence            1     122334578999998753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=3.5e-27  Score=187.66  Aligned_cols=164  Identities=18%  Similarity=0.192  Sum_probs=128.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |++|.||+|.+..+++.||+|.+......    ....+.+.+|+.+++.++|+|++.  +.+.+. ......+++|||++
T Consensus        11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~-~~~~~~~lv~e~~~   83 (257)
T cd08223          11 GSYGEVSLVRHRTDGKQYVIKKLNLRNAS----RRERKAAEQEAQLLSQLKHPNIVA--YRESWE-GEDGLLYIVMGFCE   83 (257)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEehhhcC----HHHHHHHHHHHHHHHhCCCCCeee--eeeeec-CCCCEEEEEecccC
Confidence            89999999999989999999998653221    112335678899999999999974  333322 12334689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++...+.... ...+++.++..++.|++.||.+||++|++|+||||+||++    +..+.++|+|||++......  .
T Consensus        84 ~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~----~~~~~~~l~df~~~~~~~~~~~~  158 (257)
T cd08223          84 GGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL----TRTNIIKVGDLGIARVLENQCDM  158 (257)
T ss_pred             CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE----ecCCcEEEecccceEEecccCCc
Confidence            998766544321 2357888899999999999999999999999999999999    77789999999999876432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (257)
T cd08223         159 ASTLIGTPYYMSPELFSN  176 (257)
T ss_pred             cccccCCcCccChhHhcC
Confidence            344678899999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=2.2e-27  Score=189.89  Aligned_cols=165  Identities=18%  Similarity=0.176  Sum_probs=129.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.+|+|.+......   .....+.+.+|+.+++.++|+||+  .+++++.  .....+++|||++
T Consensus        13 g~~g~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~--~~~~~~~v~e~~~   85 (267)
T cd08229          13 GQFSEVYRATCLLDGVPVALKKVQIFDLM---DAKARADCIKEIDLLKQLNHPNVI--KYYASFI--EDNELNIVLELAD   85 (267)
T ss_pred             cCCeEEEEEeecCCCceEEEEeeeehhhh---hHHHHHHHHHHHHHHHHccCCchh--hhhheeE--eCCeEEEEEEecC
Confidence            88999999999889999999987653211   122334668899999999999997  4444443  3345789999999


Q ss_pred             CCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        133 RSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       133 ~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++++..++.. ......+++..++.++.|++.||.|||++|++|+||||+||++    +.++.++|+|||++......  
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          86 AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEECcchhhhccccCCc
Confidence            9997665442 1123457888889999999999999999999999999999999    77789999999998766432  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|+..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~ape~~~~  180 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHE  180 (267)
T ss_pred             ccccccCCcCccCHHHhcC
Confidence            2234578899999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=3e-27  Score=190.32  Aligned_cols=159  Identities=22%  Similarity=0.262  Sum_probs=128.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.++.....     ...+.+.+|+.+++.++||||+  ..++.+.  .....++||||++
T Consensus        15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   85 (277)
T cd06642          15 GSFGEVYKGIDNRTKEVVAIKIIDLEEAE-----DEIEDIQQEITVLSQCDSPYIT--RYYGSYL--KGTKLWIIMEYLG   85 (277)
T ss_pred             CCCeeEEEEEEcCCCeEEEEEEeccccch-----HHHHHHHHHHHHHHcCCCCccH--hhhcccc--cCCceEEEEEccC
Confidence            89999999999889999999987643211     1234668899999999999997  4454443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++..+..++.|++.||.|||+++++|+||+|+||++    +.++.++|+|||++..+...  .
T Consensus        86 ~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06642          86 GGSALDLLKP----GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE----eCCCCEEEccccccccccCcchh
Confidence            9997666543    357888889999999999999999999999999999999    67789999999999876543  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hhcccCcccccCHHHhCc
Confidence            234568889999999865

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=5.8e-27  Score=191.40  Aligned_cols=163  Identities=20%  Similarity=0.174  Sum_probs=128.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+......   .....+.+.+|+.+++.++||||+  .+++.+.  .....++||||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~lv~e~~   83 (305)
T cd05609          11 NGAYGAVYLVRHKETRQRFAMKKINKQNLI---LRNQIQQVFVERDILTFAENPFVV--SMFCSFE--TKRHLCMVMEYV   83 (305)
T ss_pred             cCCCeeEEEEEECCCCcEEEEEEeehhhhh---hHHHHHHHHHHHHHHHhCCCCCee--eeEEEEe--cCCEEEEEEecC
Confidence            399999999999999999999998764321   122334667899999999999997  4444433  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..   ...+++..+..++.|++.||+|||+.+++||||||+||++    +..+.++|+|||+++.....  
T Consensus        84 ~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll----~~~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          84 EGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE----CCCCCEEEeeCCCccccCcCcc
Confidence            99998777655   3457888889999999999999999999999999999999    77789999999998742110  


Q ss_pred             ---------------cccceeecccCCCCccccC
Q psy11822        210 ---------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---------------~~~~~~gt~~y~aPE~l~~  228 (229)
                                     ......|+..|+|||.+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR  190 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccC
Confidence                           0112467888999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=2.4e-27  Score=189.57  Aligned_cols=161  Identities=16%  Similarity=0.105  Sum_probs=126.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+.....       ....+.+|+++++.++|+||+.  +++++.  .....+++|||+
T Consensus        16 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~   84 (263)
T cd05052          16 GGQYGEVYEGVWKKYSLTVAVKTLKEDTM-------EVEEFLKEAAVMKEIKHPNLVQ--LLGVCT--REPPFYIITEFM   84 (263)
T ss_pred             CcccceEEEEEEecCCceEEEEEecCCch-------HHHHHHHHHHHHHhCCCCChhh--eEEEEc--CCCCcEEEEEeC
Confidence            38899999999998999999998765321       2335688999999999999974  333332  344578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++.... ...+++..++.++.|+++||+|||++|++||||||+||++    +.++.+||+|||++........
T Consensus        85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCcEEeCCCcccccccccee
Confidence            9999776654322 2347777788999999999999999999999999999999    7778999999999987754322


Q ss_pred             c---ceeecccCCCCccccC
Q psy11822        212 N---TYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~---~~~gt~~y~aPE~l~~  228 (229)
                      .   ...+++.|+|||.+.+
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~  179 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAY  179 (263)
T ss_pred             eccCCCCCccccCCHHHhcc
Confidence            1   2234567999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-27  Score=195.91  Aligned_cols=160  Identities=24%  Similarity=0.294  Sum_probs=123.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc---cccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN---NVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~---~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+|+.||+|++.....     ......+.+|+.+++.++|+||+  .++++....   .....+++||
T Consensus        16 G~~g~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~~~~~~~~~~~~lv~e   88 (336)
T cd07849          16 GAYGMVCSATHKPTGVKVAIKKISPFEH-----QTFCQRTLREIKILRRFKHENII--GILDIIRPPSFESFNDVYIVQE   88 (336)
T ss_pred             cCCeEEEEEEEcCCCCeEEEEEeccccc-----chhHHHHHHHHHHHHhCCCCCcC--chhheeecccccccceEEEEeh
Confidence            8999999999999999999998764211     11223457799999999999997  444433221   2234689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+.+.... ....    ..+++..+..++.|++.||.|||+.||+||||||+||++    +..+.+||+|||++......
T Consensus        89 ~~~~~l~~-~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          89 LMETDLYK-LIKT----QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             hcccCHHH-HHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----CCCCCEEECcccceeecccc
Confidence            99864433 3222    358888899999999999999999999999999999999    77889999999999876432


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......||+.|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~  183 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLN  183 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhC
Confidence                 1123578899999998653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=2.4e-27  Score=192.39  Aligned_cols=159  Identities=22%  Similarity=0.279  Sum_probs=127.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..++..+|+|.+....      ....+.+.+|+.+++.++|+|++  .+.+.+.  .....++||||++
T Consensus        23 g~~g~vy~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   92 (292)
T cd06644          23 GAFGKVYKAKNKETGALAAAKVIETKS------EEELEDYMVEIEILATCNHPYIV--KLLGAFY--WDGKLWIMIEFCP   92 (292)
T ss_pred             CCCeEEEEEEECCCCceEEEEEeccCC------HHHHHHHHHHHHHHHhCCCCcEe--eeEEEEE--eCCeEEEEEecCC
Confidence            899999999999999999999986532      11234567899999999999997  4444433  2345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+....  ...+++..+..++.|++.||.|||+.+++||||||+||++    +.++.++|+|||++......  .
T Consensus        93 ~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          93 GGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL----TLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE----cCCCCEEEccCccceeccccccc
Confidence            99976554321  2358888899999999999999999999999999999999    77789999999998765432  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....+++.|+|||++.
T Consensus       167 ~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         167 RDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             cceecCCccccCceeec
Confidence            24567888999999985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=2.2e-27  Score=189.83  Aligned_cols=166  Identities=20%  Similarity=0.244  Sum_probs=130.3

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|.+ .+++.+|+|.++...............+.+|+.+++.++|+||+  .+++++.  .....+++|||
T Consensus         9 g~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~--~~~~~~lv~e~   83 (265)
T cd06631           9 GKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV--QYLGTCL--DDNTISIFMEF   83 (265)
T ss_pred             eccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEe--eEeeEee--cCCeEEEEEec
Confidence            3499999999986 57899999987643222222233445678999999999999997  4554443  33567999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++..++..   ...+++..+..++.|++.||+|||+.+++|+||+|+||++    +.++.++|+|||++...... 
T Consensus        84 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          84 VPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML----MPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE----CCCCeEEeccchhhHhhhhcc
Confidence            999998877654   2357888888999999999999999999999999999999    77889999999998765321 


Q ss_pred             -------cccceeecccCCCCccccC
Q psy11822        210 -------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -------~~~~~~gt~~y~aPE~l~~  228 (229)
                             ......|+..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         157 LHGTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             ccccccccccccCCCccccChhhhcC
Confidence                   1234578899999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=2.1e-27  Score=193.39  Aligned_cols=158  Identities=21%  Similarity=0.223  Sum_probs=127.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|.+..+++.||+|.+.....      ...+.+.+|+.+++.++|+|++  ..++++.  .....++||||++
T Consensus        30 g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~--~~~~~~lv~e~~~   99 (297)
T cd06656          30 GASGTVYTAIDIATGQEVAIKQMNLQQQ------PKKELIINEILVMRENKNPNIV--NYLDSYL--VGDELWVVMEYLA   99 (297)
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEecCcc------chHHHHHHHHHHHHhCCCCCEe--eEEEEEe--cCCEEEEeecccC
Confidence            8899999999988999999998864321      1223467889999999999997  4454443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++.++..++.|++.||.|||+.+++||||||+||++    +.++.++|+|||++......  .
T Consensus       100 ~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili----~~~~~~~l~Dfg~~~~~~~~~~~  171 (297)
T cd06656         100 GGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  171 (297)
T ss_pred             CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEECcCccceEccCCccC
Confidence            9998777543    347777888999999999999999999999999999999    77789999999999876443  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||.+.+
T Consensus       172 ~~~~~~~~~y~aPE~~~~  189 (297)
T cd06656         172 RSTMVGTPYWMAPEVVTR  189 (297)
T ss_pred             cCcccCCccccCHHHHcC
Confidence            234678899999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=2.2e-27  Score=192.40  Aligned_cols=160  Identities=24%  Similarity=0.244  Sum_probs=123.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+.....     ......+.+|+.+++.++|+||+.  +.+++.  +....++||||++
T Consensus        16 g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   86 (291)
T cd07844          16 GSYATVYKGRSKLTGQLVALKEIRLEHE-----EGAPFTAIREASLLKDLKHANIVT--LHDIIH--TKKTLTLVFEYLD   86 (291)
T ss_pred             cCCeEEEEEEEcCCCcEEEEEEEecccc-----cCCchhHHHHHHHHhhCCCcceee--EEEEEe--cCCeEEEEEecCC
Confidence            8999999999988999999998765321     111224567999999999999984  444443  3346799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      + ++..++...  ...+++..++.++.|+++||.|||+.+|+||||||+||++    +.++.+||+|||+++.....  .
T Consensus        87 ~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          87 T-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI----SERGELKLADFGLARAKSVPSKT  159 (291)
T ss_pred             C-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE----cCCCCEEECccccccccCCCCcc
Confidence            6 544433321  1257788889999999999999999999999999999999    77889999999998765322  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             ccccccccccCCcHHhhc
Confidence            233457888999998754

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=1.8e-27  Score=194.62  Aligned_cols=164  Identities=24%  Similarity=0.235  Sum_probs=124.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.||+|.+..+|+.||+|.++.....    ......+.+|+.++++++|+|++.  +.+++........++||||+
T Consensus        17 ~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~lv~e~~   90 (309)
T cd07845          17 EGTYGIVYRARDTTSGEIVALKKVRMDNER----DGIPISSLREITLLLNLRHPNIVE--LKEVVVGKHLDSIFLVMEYC   90 (309)
T ss_pred             ecCCEEEEEEEECCCCcEEEEEEEEeccCC----CCCcchhhHHHHHHHhCCCCCCcc--eEEEEecCCCCeEEEEEecC
Confidence            389999999999999999999987643211    111223467999999999999973  44444333334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      .++....+...   ...+++.++..++.|++.||.|||+.|++||||||+||++    +..+.+||+|||++......  
T Consensus        91 ~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~kL~dfg~~~~~~~~~~  163 (309)
T cd07845          91 EQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL----TDKGCLKIADFGLARTYGLPAK  163 (309)
T ss_pred             CCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECccceeeecCCccC
Confidence            86432222221   1358888889999999999999999999999999999999    77789999999999877543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       164 ~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         164 PMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             CCCcccccccccChhhhcC
Confidence            2234456788999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=3.2e-27  Score=191.99  Aligned_cols=165  Identities=24%  Similarity=0.257  Sum_probs=128.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.++........ ......+..|+.+++.++|+||+  .+++++..  ....++||||+
T Consensus        10 ~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~~--~~~~~lv~e~~   84 (298)
T cd07841          10 EGTYAVVYKARDKETGRIVAIKKIKLGERKEAK-DGINFTALREIKLLQELKHPNII--GLLDVFGH--KSNINLVFEFM   84 (298)
T ss_pred             eccccEEEEEEECCCCcEEEEEEEecccccccc-chhhHHHHHHHHHHhhcCCCCCh--hhhheeec--CCEEEEEEccc
Confidence            489999999999989999999998764321000 11223456789999999999997  45555543  45679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                       ++++..++....  ..+++.++..++.|+++||.|||++|++|+||+|+||++    +.++.++|+|||++......  
T Consensus        85 -~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill----~~~~~~~l~dfg~~~~~~~~~~  157 (298)
T cd07841          85 -ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI----ASDGVLKLADFGLARSFGSPNR  157 (298)
T ss_pred             -CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE----cCCCCEEEccceeeeeccCCCc
Confidence             777766655422  258888899999999999999999999999999999999    77889999999999877543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~  176 (298)
T cd07841         158 KMTHQVVTRWYRAPELLFG  176 (298)
T ss_pred             cccccccceeeeCHHHHhC
Confidence            2234567788999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.94  E-value=2.8e-27  Score=196.43  Aligned_cols=164  Identities=20%  Similarity=0.137  Sum_probs=119.0

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|.+     ..+++.||||.++....     ......+.+|+.++..+ +||||+  .+++++.. .....++
T Consensus        18 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~niv--~~~~~~~~-~~~~~~l   89 (343)
T cd05103          18 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-----HSEHRALMSELKILIHIGHHLNVV--NLLGACTK-PGGPLMV   89 (343)
T ss_pred             CccceEEEEeeccCCccccceeEEEEEeccCCC-----hHHHHHHHHHHHHHHhccCCccHh--hhcceeec-CCCceEE
Confidence            99999999974     35678999999865311     11123567899999999 689997  44443322 2235689


Q ss_pred             eeeeeeCCCCCccCCCCC--------------------------------------------------------------
Q psy11822        127 MMEVTRRSQYTGATAPPP--------------------------------------------------------------  144 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~--------------------------------------------------------------  144 (229)
                      +|||+++|+|..++....                                                              
T Consensus        90 v~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (343)
T cd05103          90 IVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQE  169 (343)
T ss_pred             EEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhh
Confidence            999999998655433210                                                              


Q ss_pred             --CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc----ccceeecc
Q psy11822        145 --PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV----CNTYLQSR  218 (229)
Q Consensus       145 --~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~  218 (229)
                        ....+++..+..++.|++.||+|||+++|+||||||+||++    +.++.+||+|||++.......    .....+++
T Consensus       170 ~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd05103         170 DLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SENNVVKICDFGLARDIYKDPDYVRKGDARLPL  245 (343)
T ss_pred             hhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE----cCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence              00124555567789999999999999999999999999999    777899999999998753321    12234566


Q ss_pred             cCCCCccccC
Q psy11822        219 YYRAPEIILG  228 (229)
Q Consensus       219 ~y~aPE~l~~  228 (229)
                      .|+|||++.+
T Consensus       246 ~y~aPE~~~~  255 (343)
T cd05103         246 KWMAPETIFD  255 (343)
T ss_pred             ceECcHHhcC
Confidence            7999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=2.3e-27  Score=196.18  Aligned_cols=162  Identities=23%  Similarity=0.326  Sum_probs=126.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh--cccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH--CNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~--~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+|+.||+|++......    ......+.+|+.+++.++||||+.  +.+++.  .......++||||
T Consensus        16 g~~g~v~~~~~~~~~~~valK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~lv~e~   89 (334)
T cd07855          16 GAYGVVCSAIDTRSGKKVAIKKIPHAFDV----PTLAKRTLRELKILRHFKHDNIIA--IRDILRPPGADFKDVYVVMDL   89 (334)
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEecccccc----ccchHHHHHHHHHHHhcCCCCccC--HHHhccccCCCCceEEEEEeh
Confidence            88999999999999999999988753211    123345678999999999999974  444432  2233467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +.+ ++..+...   ...+++..+..++.|++.||.|||+++|+||||||+||++    +.++.+||+|||++.......
T Consensus        90 ~~~-~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          90 MES-DLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV----NEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             hhh-hHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEecccccceeecccC
Confidence            975 54444433   2358888999999999999999999999999999999999    788899999999997764321


Q ss_pred             ------ccceeecccCCCCccccC
Q psy11822        211 ------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ------~~~~~gt~~y~aPE~l~~  228 (229)
                            .....|+..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             cCCCcccccccccccccChHHhcC
Confidence                  124578899999998743

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.94  E-value=1.9e-27  Score=190.68  Aligned_cols=163  Identities=19%  Similarity=0.119  Sum_probs=119.8

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|...  .....+|+|.+.....     ......+.+|+.+++.++|+||+  .+++.+.  .....++|||
T Consensus         5 ~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~e~~~~~~l~h~nii--~~~~~~~--~~~~~~lv~e   75 (269)
T cd05042           5 NGWFGKVLLGEAHRGMSKARVVVKELRASAT-----PDEQLLFLQEVQPYRELNHPNVL--QCLGQCI--ESIPYLLVLE   75 (269)
T ss_pred             ccCCceEEEEEEecCCCCeEEEEeecCccCC-----hHHHHHHHHHHHHHHhCCCCCcc--eEEEEEC--CCCceEEEEE
Confidence            4899999999643  2456899997654321     11223567899999999999997  4444433  3345799999


Q ss_pred             eeeCCCCCccCCCCCC--CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        130 VTRRSQYTGATAPPPP--AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~--~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |+++|+|..++.....  ....++..+..++.|++.||+|||+++|+||||||+|||+    +.++.+||+|||++....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill----~~~~~~kl~dfg~~~~~~  151 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL----TADLSVKIGDYGLALEQY  151 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe----cCCCcEEEeccccccccc
Confidence            9999998776544221  1224455668899999999999999999999999999999    778899999999987643


Q ss_pred             ccc----ccceeecccCCCCcccc
Q psy11822        208 KAV----CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~~----~~~~~gt~~y~aPE~l~  227 (229)
                      ...    .....+++.|+|||++.
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05042         152 PEDYYITKDCHAVPLRWLAPELVE  175 (269)
T ss_pred             cchheeccCCCCCcccccCHHHHh
Confidence            321    12345567799999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.94  E-value=3.3e-27  Score=190.69  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=122.5

Q ss_pred             cCCceeeeeeec----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTD----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.+    ..++..+|+|.+.....     ......+.+|+.+++.++||||+  .+++++.  .....++|
T Consensus        15 ~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~--~~~~~~lv   85 (283)
T cd05090          15 ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-----PQQWGEFQQEASLMAELHHPNIV--CLLGVVT--QEQPVCML   85 (283)
T ss_pred             ccCCcceEEEEEecCCCCCcceEEEEeccCCCC-----HHHHHHHHHHHHHHhhCCCCCee--eEEEEEe--cCCceEEE
Confidence            399999999985    34568999999864211     11233568899999999999997  4444433  33457999


Q ss_pred             eeeeeCCCCCccCCCCCC--------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        128 MEVTRRSQYTGATAPPPP--------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~--------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      |||++++++..++.....              ...+++..+..++.|++.||.|||+++++||||||+||++    +..+
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili----~~~~  161 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI----GEQL  161 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE----cCCC
Confidence            999999987665432110              1236666778899999999999999999999999999999    7778


Q ss_pred             cEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+++.....    ......++..|+|||++.+
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY  200 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhcc
Confidence            9999999999876432    1233455677999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.93  E-value=3.8e-27  Score=189.93  Aligned_cols=161  Identities=17%  Similarity=0.158  Sum_probs=122.3

Q ss_pred             cCCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|++..+++    +||+|+++.....     .....+.+|+.+++.+.||||..  +++++.   ....+++
T Consensus        17 ~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~--~~~~~~---~~~~~l~   86 (279)
T cd05109          17 SGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP-----KANKEILDEAYVMAGVGSPYVCR--LLGICL---TSTVQLV   86 (279)
T ss_pred             CCCCceEEEEEEecCCCccceEEEEEEecCCCCH-----HHHHHHHHHHHHHHhcCCCCCce--EEEEEc---CCCcEEE
Confidence            49999999999877766    4899987642111     12235678888999999999973  333332   2346799


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++|++..+....  ...+++.++..++.|++.||+|||+++++||||||+||++    +.++.+||+|||+++...
T Consensus        87 ~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~----~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          87 TQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV----KSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cCCCcEEECCCCceeecc
Confidence            9999999976665432  2357888899999999999999999999999999999999    667789999999998775


Q ss_pred             cccc----cceeecccCCCCccccC
Q psy11822        208 KAVC----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~----~~~~gt~~y~aPE~l~~  228 (229)
                      ....    ....+++.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILH  185 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhcc
Confidence            4321    12344667999998754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.93  E-value=1.8e-27  Score=189.67  Aligned_cols=166  Identities=21%  Similarity=0.216  Sum_probs=131.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|.++.....    ....+++.+|+.+++.++|+|++.  +++++........+++|||++
T Consensus        11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~~~~~~~~~~~~e~~~   84 (265)
T cd08217          11 GSFGTVRKVRRKSDGKILVWKEIDYGNMT----EKEKQQLVSEVNILRELKHPNIVR--YYDRIIDRSNQTLYIVMEYCE   84 (265)
T ss_pred             CCCeEEEEeeecCCCCEEEEEEEecccCC----HHHHHHHHHHHHHHHhcCCCccce--eeeeeecCCCCEEEEEehhcc
Confidence            89999999999999999999987653221    122345678999999999999974  444333333445789999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHH-----HCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLK-----QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH-----~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ++++..++... .....+++.+++.++.|++.||.|||     +.+++|+||+|+||++    +.++.+||+|||++...
T Consensus        85 ~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili----~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          85 GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL----DANNNVKLGDFGLAKIL  160 (265)
T ss_pred             CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE----ecCCCEEEecccccccc
Confidence            99976665431 12346888889999999999999999     8999999999999999    77789999999999887


Q ss_pred             Cccc--ccceeecccCCCCccccC
Q psy11822        207 SKAV--CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~--~~~~~gt~~y~aPE~l~~  228 (229)
                      ....  .....|++.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~  184 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNH  184 (265)
T ss_pred             cCCcccccccccCCCccChhhhcC
Confidence            6542  345678999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.93  E-value=3.7e-27  Score=187.52  Aligned_cols=164  Identities=18%  Similarity=0.205  Sum_probs=131.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.||.+++..+++.+|+|.+.......    .....+.+|+.++++++|+||+  .+++++.  +....+++|||+
T Consensus        10 ~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~--~~~~~~~~~e~~   81 (256)
T cd08221          10 KGAFGEATLYRRTEDDSLVVWKEVNLTRLSE----KERRDALNEIVILSLLQHPNII--AYYNHFM--DDNTLLIEMEYA   81 (256)
T ss_pred             ccCCceEEEEEEcCCCcEEEEEEEeecccch----hHHHHHHHHHHHHHhCCCCCee--EEEeEEe--cCCeEEEEEEec
Confidence            3899999999999999999999876532221    1233567899999999999997  4555544  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++.... ...+++.++..++.|++.||.|||+.+++|+||+|+||++    +.++.+||+|||++......  
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~----~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          82 NGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL----TKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             CCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE----eCCCCEEECcCcceEEcccccc
Confidence            9999777665532 2357888889999999999999999999999999999999    77779999999999876443  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|++.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~ape~~~~  175 (256)
T cd08221         157 MAETVVGTPYYMSPELCQG  175 (256)
T ss_pred             cccccCCCccccCHhhcCC
Confidence            2345678999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.9e-27  Score=188.38  Aligned_cols=159  Identities=19%  Similarity=0.116  Sum_probs=122.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.||+|.+. ++..+|+|++.....       ..+.+.+|+.+++.++||||+.  +++++.  .....++||||+
T Consensus        14 ~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~   81 (256)
T cd05059          14 SGQFGVVHLGKWR-GKIDVAIKMIREGAM-------SEDDFIEEAKVMMKLSHPNLVQ--LYGVCT--KQRPIFIVTEYM   81 (256)
T ss_pred             cCCCceEEEeEec-CCccEEEEEeccCCC-------CHHHHHHHHHHHHhCCCCCEEE--EEEEEc--CCCceEEEEecC
Confidence            3899999999875 567899998764311       2235577999999999999974  444433  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++....  ..+++..++.++.|++.||+|||+.|++||||||+||++    +.++.+||+|||+++.......
T Consensus        82 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~dfg~~~~~~~~~~  155 (256)
T cd05059          82 ANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV----GEDNVVKVSDFGLARYVLDDQY  155 (256)
T ss_pred             CCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE----CCCCcEEECCcccceecccccc
Confidence            9998766654322  257888889999999999999999999999999999999    7778999999999987654322


Q ss_pred             cce---eecccCCCCccccC
Q psy11822        212 NTY---LQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~---~gt~~y~aPE~l~~  228 (229)
                      ...   .++..|+|||.+.+
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~  175 (256)
T cd05059         156 TSSQGTKFPVKWAPPEVFDY  175 (256)
T ss_pred             cccCCCCCCccccCHHHhcc
Confidence            222   23457999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=5.8e-27  Score=188.66  Aligned_cols=163  Identities=13%  Similarity=0.039  Sum_probs=121.7

Q ss_pred             cCCceeeeeeecCCC------------------------CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccc
Q psy11822         52 LDDIGQVNVPTDLEG------------------------GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFV  107 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~------------------------~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni  107 (229)
                      .|+||.||+|....+                        ...||+|++......      ....+.+|+.+++.++||||
T Consensus         5 ~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~------~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           5 QGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRD------IALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             cccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHH------HHHHHHHHHHHHhcCCCCCe
Confidence            499999999975321                        246899988764321      22345778889999999999


Q ss_pred             cceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeC
Q psy11822        108 TLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVD  187 (229)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~  187 (229)
                      +.  +++++.  .....++||||++++++..++...  ...+++.++..++.|++.||+|||+++|+||||||+||++..
T Consensus        79 v~--~~~~~~--~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~  152 (274)
T cd05076          79 AF--VHGVCV--RGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLAR  152 (274)
T ss_pred             ee--EEEEEE--eCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence            84  444433  344578999999999987776432  235788888999999999999999999999999999999954


Q ss_pred             CC---CCCccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        188 PV---RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       188 ~~---~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   .....+||+|||++......  ....++..|+|||++.+
T Consensus       153 ~~~~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~aPe~~~~  194 (274)
T cd05076         153 LGLAEGTSPFIKLSDPGVSFTALSR--EERVERIPWIAPECVPG  194 (274)
T ss_pred             cCcccCccceeeecCCccccccccc--cccccCCcccCchhhcC
Confidence            21   12335899999998654332  23467788999998854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.93  E-value=3.1e-27  Score=194.85  Aligned_cols=163  Identities=12%  Similarity=0.092  Sum_probs=125.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      ++||.||++.+..+|+.||+|.++.....    ....+.+++|+.+++.++||||+.  +++++.  .....++||||++
T Consensus        11 ~~~~~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~--~~~~~~--~~~~~~lv~e~~~   82 (327)
T cd08227          11 EDLMTVNLARYKPTGEYVTVRRINLEACT----NEMVTFLQGELHVSKLFNHPNIVP--YRATFI--ADNELWVVTSFMA   82 (327)
T ss_pred             cceEEEEEEeecccCcEEEEEEechhhcc----HHHHHHHHHHHHHHHhcCCCCeee--EEEEEE--ECCEEEEEEeccC
Confidence            37899999999999999999998764322    112335678999999999999974  444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..++.... ...+++..++.++.|++.||+|||+++|+||||||+|||+    +.++.++++||+.+......   
T Consensus        83 ~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~----~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          83 YGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             CCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE----ecCCcEEEcccchhhcccccccc
Confidence            999776654321 1247888889999999999999999999999999999999    77779999999875443211   


Q ss_pred             ------cccceeecccCCCCccccC
Q psy11822        210 ------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ------~~~~~~gt~~y~aPE~l~~  228 (229)
                            ......++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~  182 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQ  182 (327)
T ss_pred             ccccccccccccceecccChHHhhc
Confidence                  1122456778999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.93  E-value=3.3e-27  Score=187.85  Aligned_cols=162  Identities=18%  Similarity=0.171  Sum_probs=127.2

Q ss_pred             cCCceeeeeeecCC-CCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLE-GGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+.. ++.  .||+|.+......     ...+.+.+|+.++++++||||+.  .++.+..   ...++||
T Consensus         5 ~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~---~~~~~v~   74 (257)
T cd05040           5 DGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-----DIMDDFLKEAAIMHSLDHENLIR--LYGVVLT---HPLMMVT   74 (257)
T ss_pred             ccCcccEEeeeEecCCCCceEEEEeecCCcccH-----HHHHHHHHHHHHHhhcCCCCccc--eeEEEcC---CeEEEEE
Confidence            48999999998765 333  6999998875432     33456789999999999999984  3433332   4578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+..... ..+++..+..++.|++.||.|||+++++|+||||+||++    +.++.+||+|||++..+..
T Consensus        75 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~----~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          75 ELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL----ASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             EecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE----ecCCEEEeccccccccccc
Confidence            99999997766554332 357888889999999999999999999999999999999    7778999999999987754


Q ss_pred             cc-----ccceeecccCCCCccccC
Q psy11822        209 AV-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      ..     .....++..|+|||++.+
T Consensus       150 ~~~~~~~~~~~~~~~~y~~pE~~~~  174 (257)
T cd05040         150 NEDHYVMEEHLKVPFAWCAPESLRT  174 (257)
T ss_pred             cccceecccCCCCCceecCHHHhcc
Confidence            21     123456778999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=5.3e-27  Score=187.29  Aligned_cols=159  Identities=17%  Similarity=0.123  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. +++.||+|.++....       ..+.+.+|+.++++++|||++.  +++++.  .....+++|||++
T Consensus        17 g~~~~v~~~~~~-~~~~v~iK~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   84 (261)
T cd05068          17 GQFGEVWEGLWN-NTTPVAVKTLKPGTM-------DPKDFLAEAQIMKKLRHPKLIQ--LYAVCT--LEEPIYIVTELMK   84 (261)
T ss_pred             cCCccEEEEEec-CCeEEEEEeeCCCcc-------cHHHHHHHHHHHHHCCCCCccc--eeEEEe--cCCCeeeeeeccc
Confidence            899999999964 467899999875321       1235678999999999999974  444433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++..++.... ...+++.++..++.|++.||.|||++|++||||||+||++    +.++.++|+|||++.........
T Consensus        85 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          85 YGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV----GENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             CCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE----cCCCCEEECCcceEEEccCCccc
Confidence            999777765422 2357888889999999999999999999999999999999    77789999999999887643222


Q ss_pred             ceee---cccCCCCccccC
Q psy11822        213 TYLQ---SRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~g---t~~y~aPE~l~~  228 (229)
                      ...|   +..|+|||++.+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05068         160 AREGAKFPIKWTAPEAALY  178 (261)
T ss_pred             ccCCCcCceeccCcccccc
Confidence            2223   357999998764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=3e-27  Score=190.37  Aligned_cols=163  Identities=17%  Similarity=0.152  Sum_probs=120.6

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+.     .++..||+|.+.....     ......+.+|+.+++.++||||+.  +++++.  .....++|
T Consensus        17 G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~iv~--~~~~~~--~~~~~~lv   87 (277)
T cd05062          17 GSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-----MRERIEFLNEASVMKEFNCHHVVR--LLGVVS--QGQPTLVI   87 (277)
T ss_pred             ccCCeEEEEEeccCCCCCceeEEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCCeee--EEEEEc--CCCCeEEE
Confidence            899999998754     2467899998754211     112235678999999999999974  444443  33457899


Q ss_pred             eeeeeCCCCCccCCCCCC-------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        128 MEVTRRSQYTGATAPPPP-------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      |||+++++|..++.....       ...+++..+..++.|++.||.|||+.+++||||||+||++    +.++.++|+||
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~----~~~~~~~l~df  163 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDF  163 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE----cCCCCEEECCC
Confidence            999999997766543111       1124455667889999999999999999999999999999    77889999999


Q ss_pred             CcceecCccc----ccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      |+++......    .....+++.|+|||++.+
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            9987654321    122355678999999764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG2345|consensus

Probab=99.93  E-value=2.4e-27  Score=180.19  Aligned_cols=171  Identities=21%  Similarity=0.222  Sum_probs=132.8

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--c
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--N  119 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~  119 (229)
                      .+|++..+   |+|+-||+++...+++.||+|.+.-.+      .+..+...+||+..++++|||++  .++++.-.  .
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~------~~~~e~~~rEid~~rkf~s~~vl--~l~dh~l~~~~   92 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS------QEDIEEALREIDNHRKFNSPNVL--RLVDHQLREEK   92 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc------hHHHHHHHHHHHHHHhhCCcchH--HHHHHHHHhhc
Confidence            44554444   999999999999999999999987653      23344668999999999999997  45544422  1


Q ss_pred             -cccccceeeeeeeCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccE
Q psy11822        120 -NVKASVQMMEVTRRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       120 -~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                       .....|++++|...|++.+.+.. ......+++.+++.|+.+|++||.+||+..  +.||||||+|||+    ...+.+
T Consensus        93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl----s~~~~~  168 (302)
T KOG2345|consen   93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL----SDSGLP  168 (302)
T ss_pred             cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe----cCCCce
Confidence             23457999999999985444333 233447999999999999999999999998  9999999999999    667799


Q ss_pred             EEeecCcceecCcc-----------cccceeecccCCCCcccc
Q psy11822        196 KVIDFGSASHVSKA-----------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       196 kl~DFg~a~~~~~~-----------~~~~~~gt~~y~aPE~l~  227 (229)
                      +|.|||.+....-.           .......|..|+|||++.
T Consensus       169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~  211 (302)
T KOG2345|consen  169 VLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN  211 (302)
T ss_pred             EEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchhee
Confidence            99999998765321           123356788999999874

>KOG0196|consensus

Probab=99.93  E-value=3.2e-27  Score=203.32  Aligned_cols=165  Identities=15%  Similarity=0.128  Sum_probs=134.6

Q ss_pred             eecccCCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         48 IFNCLDDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        48 ~~~~~g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      .+.+.|.||+|++|+.+..|+   .||||.++...-     ..++..|..|+.+|.++.||||++  +-+..  .....+
T Consensus       635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-----ekqrrdFL~EAsIMGQFdHPNIIr--LEGVV--Tks~Pv  705 (996)
T KOG0196|consen  635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-----EKQRRDFLSEASIMGQFDHPNIIR--LEGVV--TKSKPV  705 (996)
T ss_pred             EEEecccccceecccccCCCCcceeEEEeeeccCcc-----HHHHhhhhhhhhhcccCCCCcEEE--EEEEE--ecCcee
Confidence            344449999999999887664   799999986432     334557899999999999999984  43333  345678


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      +||+|||++|+|+.+++.+.  +.++..+..-+++.|+.|++||-+.++|||||...|||+    +.+-.+|++|||+++
T Consensus       706 MIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV----NsnLvCKVsDFGLSR  779 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV----NSNLVCKVSDFGLSR  779 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee----ccceEEEecccccee
Confidence            99999999999999988754  459999999999999999999999999999999999999    999999999999999


Q ss_pred             ecCccc---ccceeec--ccCCCCcccc
Q psy11822        205 HVSKAV---CNTYLQS--RYYRAPEIIL  227 (229)
Q Consensus       205 ~~~~~~---~~~~~gt--~~y~aPE~l~  227 (229)
                      .+.++.   .++.-|.  ..|.|||.+.
T Consensus       780 vledd~~~~ytt~GGKIPiRWTAPEAIa  807 (996)
T KOG0196|consen  780 VLEDDPEAAYTTLGGKIPIRWTAPEAIA  807 (996)
T ss_pred             ecccCCCccccccCCccceeecChhHhh
Confidence            886653   2223333  4699999874

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=7e-27  Score=187.27  Aligned_cols=165  Identities=19%  Similarity=0.177  Sum_probs=126.8

Q ss_pred             eecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         48 IFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        48 ~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      ...+.|+||.||+|++..++..||+|.+......      ....+.+|+.+++.++|+||+  .+++++.  .....++|
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv   83 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR------YVQPLHEEIALHSYLKHRNIV--QYLGSDS--ENGFFKIF   83 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHH------HHHHHHHHHHHHHhcCCCCee--eeeeeec--cCCEEEEE
Confidence            3444599999999999889999999987653221      223568899999999999997  4554443  33457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCcc--ccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcce
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVL--VPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSAS  204 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l--~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~  204 (229)
                      |||+++++|..++....  ..+  ++..+..++.|++.||+|||+++|+||||||+||++    +. .+.++|+|||++.
T Consensus        84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~----~~~~~~~~l~dfg~~~  157 (268)
T cd06624          84 MEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLV----NTYSGVVKISDFGTSK  157 (268)
T ss_pred             EecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE----cCCCCeEEEecchhhe
Confidence            99999999877655321  123  556677889999999999999999999999999999    44 4689999999987


Q ss_pred             ecCcc--cccceeecccCCCCccccC
Q psy11822        205 HVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....  ......|++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~aPE~~~~  183 (268)
T cd06624         158 RLAGINPCTETFTGTLQYMAPEVIDK  183 (268)
T ss_pred             ecccCCCccccCCCCccccChhhhcc
Confidence            66432  2234568899999998743

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=3.7e-27  Score=190.24  Aligned_cols=162  Identities=22%  Similarity=0.287  Sum_probs=125.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |++|.||+|++..+|+.||+|+++....     ....+.+.+|+.+++.++|+|++  .+++++..  ....++||||++
T Consensus        11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~~--~~~~~lv~e~~~   81 (284)
T cd07836          11 GTYATVYKGRNRTTGEIVALKEIHLDAE-----EGTPSTAIREISLMKELKHENIV--RLHDVIHT--ENKLMLVFEYMD   81 (284)
T ss_pred             CCceEEEEEEECCCCeEEEEEEeccccc-----ccchHHHHHHHHHHHhhcCCCEe--eeeeeEee--CCcEEEEEecCC
Confidence            8899999999999999999998875321     11223457799999999999997  45555443  345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++. ..++........+++..+..++.|++.||.|||+.|++||||||+||++    +.++.++|+|||++......  .
T Consensus        82 ~~l-~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~----~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          82 KDL-KKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI----NKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             ccH-HHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE----CCCCcEEEeecchhhhhcCCccc
Confidence            743 3333322223458888899999999999999999999999999999999    77789999999999765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||++.+
T Consensus       157 ~~~~~~~~~y~~PE~~~~  174 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLG  174 (284)
T ss_pred             cccccccccccChHHhcC
Confidence            234567889999998754

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=3.5e-27  Score=191.52  Aligned_cols=163  Identities=17%  Similarity=0.152  Sum_probs=124.7

Q ss_pred             CCceeeeeeecCCCC----------------cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLEGG----------------ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~----------------~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |+||.||+|.+..++                ..||+|.+......     ...+.+.+|+++++.++|||++.  +++++
T Consensus        16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~--~~~~~   88 (296)
T cd05051          16 GQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-----NAREDFLKEVKILSRLSDPNIAR--LLGVC   88 (296)
T ss_pred             CCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-----HHHHHHHHHHHHHHhcCCCCEeE--EEEEE
Confidence            899999998876543                56899987753211     23446688999999999999974  44443


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCC--------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPP--------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP  188 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~--------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~  188 (229)
                      .  .....+++|||++++++..++....        ....+++..++.++.|++.||+|||+++++||||||+||++   
T Consensus        89 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili---  163 (296)
T cd05051          89 T--VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV---  163 (296)
T ss_pred             e--cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee---
Confidence            3  3356799999999998766654321        11257778889999999999999999999999999999999   


Q ss_pred             CCCCccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        189 VRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       189 ~~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                       +..+.++|+|||++.......    .....+++.|+|||++.+
T Consensus       164 -~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         164 -GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             -cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc
Confidence             777899999999998664321    234456778999998764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=6.6e-27  Score=186.20  Aligned_cols=159  Identities=17%  Similarity=0.083  Sum_probs=122.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+. ++..+|+|.+.....       ..+.+.+|+.+++.++||||+.  +++++.  .....++||||+
T Consensus        14 ~G~~~~vy~~~~~-~~~~~a~K~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~iv~e~~   81 (256)
T cd05114          14 SGQFGVVHLGKWR-AQIKVAIKAINEGAM-------SEEDFIEEAKVMMKLSHPKLVQ--LYGVCT--QQKPLYIVTEFM   81 (256)
T ss_pred             CCcCceEEEEEec-cCceEEEEecccCCc-------cHHHHHHHHHHHHHCCCCCcee--EEEEEc--cCCCEEEEEEcC
Confidence            3899999999875 456899998764311       1235678999999999999974  444433  344579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++|++..++....  ..+++..+..++.|++.||+|||++|++||||||+||++    +.++.+||+|||+++.......
T Consensus        82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          82 ENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV----SSTGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE----cCCCeEEECCCCCccccCCCce
Confidence            9999766654321  247778889999999999999999999999999999999    7778999999999986643321


Q ss_pred             ---cceeecccCCCCccccC
Q psy11822        212 ---NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ---~~~~gt~~y~aPE~l~~  228 (229)
                         ....++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd05114         156 TSSSGAKFPVKWSPPEVFNF  175 (256)
T ss_pred             eccCCCCCchhhCChhhccc
Confidence               22344567999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=6.5e-27  Score=187.08  Aligned_cols=158  Identities=16%  Similarity=0.127  Sum_probs=122.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+ ..||+|.++...       ...+.+.+|+.+++.++||||+.+  ++...   ....++||||++
T Consensus        17 g~~~~v~~~~~~~~-~~valK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~--~~~~~---~~~~~lv~e~~~   83 (262)
T cd05071          17 GCFGEVWMGTWNGT-TRVAIKTLKPGT-------MSPEAFLQEAQVMKKLRHEKLVQL--YAVVS---EEPIYIVTEYMS   83 (262)
T ss_pred             CCCCcEEEEEecCC-ceEEEEecccCc-------cCHHHHHHHHHHHHhCCCCCcceE--EEEEC---CCCcEEEEEcCC
Confidence            89999999988654 569999887531       122356889999999999999743  33322   234689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      ++++..++.... ...+++..+..++.|++.||+|||+.+++||||||+||++    +.++.++|+|||.++....... 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill----~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          84 KGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE----cCCCcEEeccCCceeeccccccc
Confidence            999776655421 2346778889999999999999999999999999999999    7778999999999987654321 


Q ss_pred             --cceeecccCCCCccccC
Q psy11822        212 --NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 --~~~~gt~~y~aPE~l~~  228 (229)
                        ....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~  177 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALY  177 (262)
T ss_pred             cccCCcccceecCHhHhcc
Confidence              23455678999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=5.8e-27  Score=186.98  Aligned_cols=162  Identities=26%  Similarity=0.328  Sum_probs=130.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.++.....    ......+.+|+.+++.++|+||+  .+++...  +....++|+||+
T Consensus        10 ~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~~~~l~~~~i~--~~~~~~~--~~~~~~lv~e~~   81 (264)
T cd06626          10 GGTFGKVYTAVNLDTGELMAVKEIRIQDND----PKTIKEIADEMKVLELLKHPNLV--KYYGVEV--HREKVYIFMEYC   81 (264)
T ss_pred             cCCCcEEEEEEECCCCcEEEEEEEECcccc----hHHHHHHHHHHHHHHhCCCCChh--heeeeEe--cCCEEEEEEecC
Confidence            399999999999889999999998764322    22345678999999999999997  4444332  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +++++..+...   ...+++..+..++.|++.||.|||+.|++|+||+|+||++    +..+.+||+|||++....... 
T Consensus        82 ~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          82 SGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL----DHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEcccccccccCCCCC
Confidence            99998777665   2347788889999999999999999999999999999999    777899999999998775431 


Q ss_pred             -----ccceeecccCCCCccccC
Q psy11822        211 -----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -----~~~~~gt~~y~aPE~l~~  228 (229)
                           .....+++.|+|||++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~  177 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITG  177 (264)
T ss_pred             cccccccCCcCCcCccChhhccC
Confidence                 123567889999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0608|consensus

Probab=99.93  E-value=3.6e-27  Score=199.34  Aligned_cols=141  Identities=16%  Similarity=0.224  Sum_probs=117.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||+|.++.-..|...||+|.+.+...   -..++...++.|-.+|.....+.|+  +++..+  -+...+|+||+|+
T Consensus       639 vGAFGeV~Lv~KvDT~~lYAmKTLrKaDV---l~rnQvaHVKAERDILAEADn~WVV--rLyySF--QDkdnLYFVMdYI  711 (1034)
T KOG0608|consen  639 VGAFGEVCLVRKVDTRALYAMKTLRKADV---LMRNQVAHVKAERDILAEADNEWVV--RLYYSF--QDKDNLYFVMDYI  711 (1034)
T ss_pred             ccccceeEEEeecchhhHHHHhhhHHHHH---HhhhhhhhhhhhhhhHhhcCCcceE--EEEEEe--ccCCceEEEEecc
Confidence            39999999999888999999999987533   2244566788999999998888776  444333  3455689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +||++--++-+   .+.|.+..++.++.++..|+++.|+.|+|||||||+||||    +.+|++||.||||+.-+
T Consensus       712 PGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI----DrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  712 PGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             CCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE----ccCCceeeeeccccccc
Confidence            99995444443   3578899999999999999999999999999999999999    99999999999998644

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=5e-27  Score=188.32  Aligned_cols=169  Identities=15%  Similarity=0.087  Sum_probs=123.2

Q ss_pred             cCCceeeeeeecCCCCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--cccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--NNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~~~~~~lv  127 (229)
                      .|+||.||+|.+..++.  .+|+|.++.....    ....+.+.+|+.+++.++|+||+.+..+.+...  ......+++
T Consensus         9 ~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v   84 (272)
T cd05075           9 EGEFGSVMEGQLNQDDSILKVAVKTMKIAICT----RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVI   84 (272)
T ss_pred             cccCceEEEeEEccCCCeeeEEEEecccCcCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEE
Confidence            38999999999877665  6999987653111    122345678999999999999984332211111  112346899


Q ss_pred             eeeeeCCCCCccCCC---CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        128 MEVTRRSQYTGATAP---PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      |||+.++++..+...   ......+++..+..++.|++.||+|||+++|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~  160 (272)
T cd05075          85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML----NENMNVCVADFGLSK  160 (272)
T ss_pred             EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE----cCCCCEEECCCCccc
Confidence            999999986654321   0112347788889999999999999999999999999999999    777899999999998


Q ss_pred             ecCccc----ccceeecccCCCCccccC
Q psy11822        205 HVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ......    .....+++.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccC
Confidence            765432    122345667999999764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.93  E-value=4.2e-27  Score=188.76  Aligned_cols=163  Identities=18%  Similarity=0.146  Sum_probs=121.1

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+.  .++..+|+|.++.....     .....+.+|+.+++.++||||+  .+++.+.  +....++|||
T Consensus         5 ~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e   75 (269)
T cd05087           5 NGWFGKVILGEVNSGYTPAQVVVKELRVSASV-----QEQMKFLEEAQPYRSLQHSNLL--QCLGQCT--EVTPYLLVME   75 (269)
T ss_pred             ccCCceEEEEEEcCCCCceEEEEEecCCCCCh-----HHHHHHHHHHHHHHhCCCCCEe--eEEEEEc--CCCCcEEEEE
Confidence            4899999999754  35678999987653211     1123567899999999999997  4444433  3345789999


Q ss_pred             eeeCCCCCccCCCCC--CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        130 VTRRSQYTGATAPPP--PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~--~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |+++|++..++....  .....++..+..++.|++.||.|||+.+++||||||+||++    +..+.+||+|||++....
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~----~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL----TADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEECCcccccccc
Confidence            999999766654311  11234445567889999999999999999999999999999    777899999999987553


Q ss_pred             ccc----ccceeecccCCCCcccc
Q psy11822        208 KAV----CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~~----~~~~~gt~~y~aPE~l~  227 (229)
                      ...    .....+++.|+|||++.
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087         152 KEDYYVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             CcceeecCCCcCCcccccCHhHhc
Confidence            321    12346778899999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.93  E-value=8e-27  Score=190.40  Aligned_cols=163  Identities=17%  Similarity=0.191  Sum_probs=121.8

Q ss_pred             CCceeeeeeecC-------CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDL-------EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++.       .++..||+|.+.....     ......+.+|+.+++.+ +||||+  .+++.+.  .....
T Consensus        26 G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~i~--~~~~~~~--~~~~~   96 (304)
T cd05101          26 GCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-----EKDLSDLVSEMEMMKMIGKHKNII--NLLGACT--QDGPL   96 (304)
T ss_pred             cCCceEEEEEEeccCCCCCCcceeEEeeecccccc-----hHHHHHHHHHHHHHHhhccCCCch--heeEEEe--cCCce
Confidence            889999999742       2355899998865321     11233568899999999 899997  4444433  33457


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      +++|||+++++|..++....             +...+++.++..++.|++.||.|||++|++||||||+||++    +.
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili----~~  172 (304)
T cd05101          97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV----TE  172 (304)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE----cC
Confidence            99999999998766654321             11245666677889999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++.....    ......+++.|+|||++.+
T Consensus       173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             CCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence            789999999999877542    1123345678999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.93  E-value=6.9e-27  Score=189.73  Aligned_cols=167  Identities=23%  Similarity=0.309  Sum_probs=123.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhccc---cccccee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNN---VKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~---~~~~~lv  127 (229)
                      .|+||.||+|.+..+++.||+|.++....    .......+.+|+.+++.+. ||||+.  +++++....   ....|+|
T Consensus        11 ~g~~g~vy~~~~~~~~~~v~lK~~~~~~~----~~~~~~~~~~E~~~l~~l~~~~~i~~--~~~~~~~~~~~~~~~~~lv   84 (295)
T cd07837          11 EGTYGKVYKARDKNTGKLVALKKTRLEMD----EEGIPPTALREISLLQMLSESIYIVR--LLDVEHVEEKNGKPSLYLV   84 (295)
T ss_pred             ccCCeEEEEEEECCCCcEEEEEeehhhcc----ccCCchHHHHHHHHHHHccCCCCccc--eeeeEeecCCCCCceEEEE
Confidence            38899999999999999999998765321    1122345678999999994 699974  333332211   2236899


Q ss_pred             eeeeeCCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCccee
Q psy11822        128 MEVTRRSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASH  205 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~  205 (229)
                      |||++++....+..... ....+++..++.++.||+.||.|||+++|+||||+|+||++    +. ++.+||+|||++..
T Consensus        85 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~----~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          85 FEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLV----DKQKGLLKIADLGLGRA  160 (295)
T ss_pred             eeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----ecCCCeEEEeeccccee
Confidence            99999754333322211 12457888899999999999999999999999999999999    55 67999999999987


Q ss_pred             cCcc--cccceeecccCCCCccccC
Q psy11822        206 VSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      ....  ......+++.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~aPE~~~~  185 (295)
T cd07837         161 FSIPVKSYTHEIVTLWYRAPEVLLG  185 (295)
T ss_pred             cCCCccccCCcccccCCCChHHhhC
Confidence            6432  2234567889999998754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=9.5e-27  Score=186.23  Aligned_cols=162  Identities=16%  Similarity=0.043  Sum_probs=120.7

Q ss_pred             cCCceeeeeeecCCC------------CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc
Q psy11822         52 LDDIGQVNVPTDLEG------------GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN  119 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~------------~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~  119 (229)
                      .|+||.||+|+....            ...+|+|++......      ....+.+|+..++.++||||+.  +++++.  
T Consensus         5 ~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~------~~~~~~~~~~~l~~l~hp~iv~--~~~~~~--   74 (262)
T cd05077           5 RGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRD------ISLAFFETASMMRQVSHKHIVL--LYGVCV--   74 (262)
T ss_pred             cCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhh------HHHHHHHHHHHHHhCCCCCEee--EEEEEe--
Confidence            489999999985422            336999987664221      2235577888999999999984  444433  


Q ss_pred             cccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC---CCccEE
Q psy11822        120 NVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR---QPYRVK  196 (229)
Q Consensus       120 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~---~~~~~k  196 (229)
                      .....++||||+++++++.+....  ...+++.++..++.|+++||+|||+++|+||||||+|||+.....   ....++
T Consensus        75 ~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~  152 (262)
T cd05077          75 RDVENIMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIK  152 (262)
T ss_pred             cCCCCEEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeE
Confidence            334568999999999977665432  234788888999999999999999999999999999999954211   122489


Q ss_pred             EeecCcceecCcccccceeecccCCCCcccc
Q psy11822        197 VIDFGSASHVSKAVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       197 l~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~  227 (229)
                      ++|||++......  ....++..|+|||++.
T Consensus       153 l~d~g~~~~~~~~--~~~~~~~~y~aPE~~~  181 (262)
T cd05077         153 LSDPGIPITVLSR--QECVERIPWIAPECVE  181 (262)
T ss_pred             eCCCCCCccccCc--ccccccccccChhhhc
Confidence            9999998765432  3456788999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=4.8e-27  Score=191.80  Aligned_cols=165  Identities=17%  Similarity=0.073  Sum_probs=121.1

Q ss_pred             ccCCceeeeeeecCCCCcE--EEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         51 CLDDIGQVNVPTDLEGGEL--LAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      +.|+||.||+|.+..++..  +|+|.++...     .......+.+|+.++.++ +|+||+  .+++++.  .....|+|
T Consensus        16 g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~Ei~~l~~l~~h~~iv--~~~~~~~--~~~~~~lv   86 (303)
T cd05088          16 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-----SKDDHRDFAGELEVLCKLGHHPNII--NLLGACE--HRGYLYLA   86 (303)
T ss_pred             cCCCCceEEEEEEccCCceeeEEEEEecccC-----CHHHHHHHHHHHHHHHHhcCCCCcc--eEEEEEC--CCCCceEE
Confidence            3489999999998777764  5777655321     112234567899999999 899997  4444443  33457999


Q ss_pred             eeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        128 MEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      |||++++++..++....             ....+++.+++.++.|++.||+|||++|++||||||+|||+    +.++.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili----~~~~~  162 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYV  162 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe----cCCCc
Confidence            99999998655543211             12247777889999999999999999999999999999999    77789


Q ss_pred             EEEeecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||++...... ......++..|+|||++.+
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (303)
T cd05088         163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  197 (303)
T ss_pred             EEeCccccCcccchhhhcccCCCcccccCHHHHhc
Confidence            999999998744321 1122234567999998754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=2.9e-27  Score=191.16  Aligned_cols=160  Identities=19%  Similarity=0.274  Sum_probs=129.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++.....     ......+.+|+++++.++||||+.  .++++.  .....++||||++
T Consensus        16 g~~g~v~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   86 (284)
T cd06620          16 GNGGSVSKVKHIPTGTVMAKKVVHIGAK-----SSVRKQILRELQIMHECRSPYIVS--FYGAFL--NENNICMCMEFMD   86 (284)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEEecCc-----chHHHHHHHHHHHHHHcCCCCcce--EeeeEe--cCCEEEEEEecCC
Confidence            8999999999999999999998764311     122346788999999999999974  444443  3356799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++++..+...   .+.+++..+..++.|++.||.|||+ .+++||||+|+||++    +.++.++|+|||++........
T Consensus        87 ~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~----~~~~~~~l~d~gl~~~~~~~~~  159 (284)
T cd06620          87 CGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV----NSRGQIKLCDFGVSGELINSIA  159 (284)
T ss_pred             CCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE----CCCCcEEEccCCcccchhhhcc
Confidence            9998776554   2357888889999999999999997 689999999999999    7778999999999876644444


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....|+..|+|||++.+
T Consensus       160 ~~~~~~~~~~aPE~~~~  176 (284)
T cd06620         160 DTFVGTSTYMSPERIQG  176 (284)
T ss_pred             CccccCcccCCHHHHcc
Confidence            45689999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=4.2e-27  Score=190.00  Aligned_cols=164  Identities=17%  Similarity=0.154  Sum_probs=122.0

Q ss_pred             cCCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         52 LDDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .|+||.||+|.+..     .+..||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.  .....++
T Consensus        15 ~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~~~~l~h~~iv--~~~~~~~--~~~~~~~   85 (283)
T cd05091          15 EDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-----GPLREEFKHEAMMRSRLQHPNIV--CLLGVVT--KEQPLSM   85 (283)
T ss_pred             CCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-----HHHHHHHHHHHHHHhcCCCCCcC--eEEEEEc--CCCceEE
Confidence            38999999998754     357899999874321     11234568899999999999997  4444443  3345789


Q ss_pred             eeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        127 MMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      ++||+.++++..++....             ....+++..+..++.|++.||.|||++||+||||||+||++    +..+
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~----~~~~  161 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV----FDKL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe----cCCC
Confidence            999999888655542110             11235666678899999999999999999999999999999    7777


Q ss_pred             cEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+++......    .....+++.|+|||++.+
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY  200 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhc
Confidence            99999999988764321    234456778999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=5.1e-27  Score=190.09  Aligned_cols=166  Identities=20%  Similarity=0.237  Sum_probs=130.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.+|.||+|.+..+++.+|+|.+......     .....+.+|+++++.++||||+  .+++++.......+++||||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621          11 EGAGGSVTKCRLKNTGMIFALKTITTDPNP-----DLQKQILRELEINKSCKSPYIV--KYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             cCCceEEEEEEECCCCeEEEEEEEecCCch-----HHHHHHHHHHHHHHhCCCCCee--eeeeEEEccCCCeEEEEEEec
Confidence            389999999999889999999988753211     2234568899999999999997  455544433444679999999


Q ss_pred             eCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++|..+... ......+++..+..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||++.......
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL----TRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----ecCCeEEEeeccccccccccc
Confidence            99987654321 1113457777888999999999999999999999999999999    677799999999987665443


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||.+.+
T Consensus       160 ~~~~~~~~~y~~pE~~~~  177 (287)
T cd06621         160 AGTFTGTSFYMAPERIQG  177 (287)
T ss_pred             cccccCCccccCHHHhcC
Confidence            345667889999998764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=5e-27  Score=189.08  Aligned_cols=163  Identities=17%  Similarity=0.191  Sum_probs=125.1

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+..     +++.||+|.++.....     ...+.+.+|+++++.+.|+||+  .+++++.  .....++|
T Consensus        16 g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~--~~~~~~lv   86 (280)
T cd05049          16 GAFGKVFLGECYHLEPENDKELVAVKTLKETASN-----DARKDFEREAELLTNFQHENIV--KFYGVCT--EGDPPIMV   86 (280)
T ss_pred             cCCceEeeeeeccccCcCCcceEEEEeecccCCH-----HHHHHHHHHHHHHHhcCCCCch--heeeEEe--cCCCeEEE
Confidence            8999999998743     4688999998653211     1234678999999999999997  4444443  33567999


Q ss_pred             eeeeeCCCCCccCCCCC-----------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        128 MEVTRRSQYTGATAPPP-----------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-----------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                      |||+++++|..++....           ....+++..+..++.|++.||.|||++|++||||||+||++    +.++.++
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~k  162 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV----GYDLVVK  162 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE----cCCCeEE
Confidence            99999999766654321           12346777788999999999999999999999999999999    7778999


Q ss_pred             EeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        197 VIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       197 l~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|||++.......    .....+++.|+|||++.+
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence            99999998653321    233456778999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=7.9e-27  Score=185.99  Aligned_cols=160  Identities=23%  Similarity=0.274  Sum_probs=129.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.+|+|++......      ..+.+.+|+.+++.++||||+.  +++++.  .....+++|||++
T Consensus        14 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~--~~~~~~--~~~~~~l~~e~~~   83 (262)
T cd06613          14 GTYGDVYKARDIATGELVAIKVIKLEPGD------DFEIIQQEISMLKECRHPNIVA--YFGSYL--RRDKLWIVMEYCG   83 (262)
T ss_pred             CCceEEEEeEecCCCCEEEEEEEEcCchh------hHHHHHHHHHHHHhCCCCChhc--eEEEEE--eCCEEEEEEeCCC
Confidence            89999999999889999999998754221      2346688999999999999974  444433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+....  ...+++.++..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||++......  .
T Consensus        84 ~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          84 GGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL----TEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE----CCCCCEEECccccchhhhhhhhc
Confidence            99987765542  1358888899999999999999999999999999999999    77889999999998876543  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       158 ~~~~~~~~~y~~Pe~~~~  175 (262)
T cd06613         158 RKSFIGTPYWMAPEVAAV  175 (262)
T ss_pred             cccccCCccccCchhhcc
Confidence            244678889999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.93  E-value=9.9e-27  Score=196.56  Aligned_cols=164  Identities=17%  Similarity=0.136  Sum_probs=120.5

Q ss_pred             cCCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccc
Q psy11822         52 LDDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .|+||.||+|++.     .+++.||+|+++.....     ...+.+.+|+.++..+. ||||+.  +++.+.  .....+
T Consensus        47 ~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~~E~~~l~~l~~H~niv~--~~~~~~--~~~~~~  117 (401)
T cd05107          47 SGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-----SEKQALMSELKIMSHLGPHLNIVN--LLGACT--KGGPIY  117 (401)
T ss_pred             CCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-----hHHHHHHHHHHHHHhcCCCCCeEE--EEEEEc--cCCCcE
Confidence            3899999999853     35678999998753211     12235688999999997 999984  444433  334679


Q ss_pred             eeeeeeeCCCCCccCCCCCC------------------------------------------------------------
Q psy11822        126 QMMEVTRRSQYTGATAPPPP------------------------------------------------------------  145 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~------------------------------------------------------------  145 (229)
                      +||||+++|+|..++.....                                                            
T Consensus       118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (401)
T cd05107         118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG  197 (401)
T ss_pred             EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence            99999999986554432110                                                            


Q ss_pred             -----------------------------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC
Q psy11822        146 -----------------------------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       146 -----------------------------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~  190 (229)
                                                         ...+++..+..++.|++.||.|||+.+++||||||+|||+    +
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl----~  273 (401)
T cd05107         198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI----C  273 (401)
T ss_pred             hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE----e
Confidence                                               0123344456688999999999999999999999999999    6


Q ss_pred             CCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        191 QPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+.+||+|||+++.....    ......+++.|+|||++.+
T Consensus       274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  315 (401)
T cd05107         274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN  315 (401)
T ss_pred             CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC
Confidence            6779999999999865322    1223467788999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=9.2e-27  Score=190.97  Aligned_cols=165  Identities=24%  Similarity=0.280  Sum_probs=129.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+.......   ......+.+|+.+++.+.|+||+.  +++.+.  .....++||||+
T Consensus        11 ~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~   83 (316)
T cd05574          11 KGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---RNKVKRVLTEQEILATLDHPFLPT--LYASFQ--TETYLCLVMDYC   83 (316)
T ss_pred             CCccEEEEEEEEcCCCcEEEEEEEeccccch---HHHHHHHHHHHHHHHhCCCCCchh--heeeee--cCCEEEEEEEec
Confidence            4899999999999899999999987643221   123446788999999999999974  444433  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      .++++..+..... ...+++..+..++.|++.||+|||+.|++|+||||+||++    +.++.++|+|||++......  
T Consensus        84 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~~l~dfg~~~~~~~~~~  158 (316)
T cd05574          84 PGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL----HESGHIMLSDFDLSKQSDVEPP  158 (316)
T ss_pred             CCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE----cCCCCEEEeecchhhccccccc
Confidence            9999777655322 2458888889999999999999999999999999999999    77789999999998755321  


Q ss_pred             -----------------------------cccceeecccCCCCccccC
Q psy11822        210 -----------------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----------------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                                                   ......||..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  206 (316)
T cd05574         159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG  206 (316)
T ss_pred             ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC
Confidence                                         0113468889999998864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=8e-27  Score=189.03  Aligned_cols=162  Identities=15%  Similarity=0.156  Sum_probs=123.8

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||++.+     ..++..+|+|.+....      ......+.+|+.++++++||||+.  +++++.  .....++|
T Consensus        16 G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv   85 (288)
T cd05093          16 GAFGKVFLAECYNLCPEQDKILVAVKTLKDAS------DNARKDFHREAELLTNLQHEHIVK--FYGVCV--EGDPLIMV   85 (288)
T ss_pred             cCCeeEEeeEeccCCCCCcceEEEEEecCCcC------HHHHHHHHHHHHHHHhCCCCCcce--EEEEEe--cCCccEEE
Confidence            88999999975     2346679999876532      112335688999999999999974  444433  33457999


Q ss_pred             eeeeeCCCCCccCCCCC----------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEE
Q psy11822        128 MEVTRRSQYTGATAPPP----------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV  197 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~----------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl  197 (229)
                      |||++++++..++....          ....+++..+..++.|++.||+|||++|++||||||+||++    +..+.++|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili----~~~~~~kl  161 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKI  161 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCcEEe
Confidence            99999999765543211          12347888889999999999999999999999999999999    77789999


Q ss_pred             eecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        198 IDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       198 ~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +|||+++......    .....+++.|+|||++.+
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  196 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  196 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhcc
Confidence            9999998664321    123445778999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=6.7e-27  Score=202.96  Aligned_cols=165  Identities=19%  Similarity=0.170  Sum_probs=115.1

Q ss_pred             CCceeeeeeecCCC-CcEEEEeh--------------hhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh
Q psy11822         53 DDIGQVNVPTDLEG-GELLAEKA--------------DRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH  117 (229)
Q Consensus        53 g~fg~Vy~a~~~~~-~~~vaiK~--------------~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~  117 (229)
                      |+||.||+|.+... +...+.|.              +.+..   .........+.+|+.+++.++||||+  .+++++.
T Consensus       159 G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~---~~~~~~~~~~~~Ei~il~~l~HpnIv--~l~~~~~  233 (501)
T PHA03210        159 GAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRV---KAGSRAAIQLENEILALGRLNHENIL--KIEEILR  233 (501)
T ss_pred             CCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHh---hcchHHHHHHHHHHHHHHhCCCCCcC--cEeEEEE
Confidence            99999999876432 22222221              11100   01112334678999999999999998  4555544


Q ss_pred             cccccccceeeeeeeCCCCCccCCCCCC-CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        118 CNNVKASVQMMEVTRRSQYTGATAPPPP-AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       118 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                      .  ....|+|++++.+..+..+...... .......+++.++.|++.||.|||++|||||||||+|||+    +.++.+|
T Consensus       234 ~--~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl----~~~~~vk  307 (501)
T PHA03210        234 S--EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL----NCDGKIV  307 (501)
T ss_pred             E--CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEE
Confidence            3  3456899999877654433222111 1112334567899999999999999999999999999999    7788999


Q ss_pred             EeecCcceecCccc---ccceeecccCCCCccccC
Q psy11822        197 VIDFGSASHVSKAV---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       197 l~DFg~a~~~~~~~---~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|||+++.+....   .....||+.|+|||++.+
T Consensus       308 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  342 (501)
T PHA03210        308 LGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG  342 (501)
T ss_pred             EEeCCCceecCcccccccccccCCcCCCCchhhcC
Confidence            99999998775432   234689999999999865

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=7.1e-27  Score=193.53  Aligned_cols=161  Identities=25%  Similarity=0.334  Sum_probs=125.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc---ccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN---VKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~---~~~~~lv~e  129 (229)
                      |+||.||+|++..+++.||+|.++.....    ......+.+|+.+++.++|+||+  .+++++....   ....++|||
T Consensus        16 G~~~~vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~ni~--~~~~~~~~~~~~~~~~~~lv~e   89 (337)
T cd07858          16 GAYGIVCSAKNSETNEKVAIKKIANAFDN----RIDAKRTLREIKLLRHLDHENVI--AIKDIMPPPHREAFNDVYIVYE   89 (337)
T ss_pred             CCCeEEEEEEecCCCCeEEEEEecccccc----cchhHHHHHHHHHHHhcCCCCcc--chHHheecccccccCcEEEEEe
Confidence            89999999999999999999987653211    11223456799999999999997  4444443221   234799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+.++ +......   ...+++..+..++.|++.||.|||+++++||||||+||++    +.++.+||+|||+++.....
T Consensus        90 ~~~~~-L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~----~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          90 LMDTD-LHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             CCCCC-HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEECcCccccccCCC
Confidence            99754 4333333   2458888999999999999999999999999999999999    77789999999999876443


Q ss_pred             --cccceeecccCCCCcccc
Q psy11822        210 --VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~  227 (229)
                        ......++..|+|||++.
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             cccccccccccCccChHHHh
Confidence              234567889999999875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.93  E-value=9.7e-27  Score=188.77  Aligned_cols=164  Identities=16%  Similarity=0.185  Sum_probs=123.2

Q ss_pred             cCCceeeeeeecCCC-----CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccc
Q psy11822         52 LDDIGQVNVPTDLEG-----GELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .|+||.||+|.+...     ...+|+|.+......     .....+.+|+.+++.+ +|+||+.  +++++.  .....+
T Consensus        22 ~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~~E~~~l~~l~~h~~i~~--~~~~~~--~~~~~~   92 (293)
T cd05053          22 EGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE-----KDLSDLVSEMEMMKMIGKHKNIIN--LLGVCT--QEGPLY   92 (293)
T ss_pred             ccccccEEEEEEecCCCCCCceeEEEEEccCCCCH-----HHHHHHHHHHHHHHhhcCCCCeee--EEEEEc--CCCCeE
Confidence            389999999987643     378999987653211     1223567899999999 8999974  444433  334579


Q ss_pred             eeeeeeeCCCCCccCCCC-------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC
Q psy11822        126 QMMEVTRRSQYTGATAPP-------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP  192 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~-------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~  192 (229)
                      ++|||++++++..++...             .....+++..++.++.|++.||+|||+++|+||||||+||++    +.+
T Consensus        93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~----~~~  168 (293)
T cd05053          93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV----TED  168 (293)
T ss_pred             EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE----cCC
Confidence            999999999976554321             123457777788899999999999999999999999999999    777


Q ss_pred             ccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        193 YRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +.+||+|||+++.+....    .....++..|+|||++.+
T Consensus       169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  208 (293)
T cd05053         169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD  208 (293)
T ss_pred             CeEEeCccccccccccccceeccCCCCCCccccCHHHhcc
Confidence            899999999998765432    122334567999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.93  E-value=1.1e-26  Score=187.55  Aligned_cols=161  Identities=18%  Similarity=0.184  Sum_probs=122.7

Q ss_pred             cCCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.+..+++    ++|+|.+.....     ......+..|+..++.+.||||+.  .+++..   ....+++
T Consensus        17 ~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~l~~l~h~~iv~--~~~~~~---~~~~~~i   86 (279)
T cd05111          17 SGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-----RQTFQEITDHMLAMGSLDHAYIVR--LLGICP---GASLQLV   86 (279)
T ss_pred             ccCCcceEEEEEcCCCCceeeEEEEeecccccc-----hHHHHHHHHHHHHHhcCCCCCcce--EEEEEC---CCccEEE
Confidence            49999999999877776    477787653211     112235577888889999999974  444432   2346789


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +||+++|++..++...  ...+++..+..++.|++.||+|||+++++||||||+||++    +.++.+||+|||+++...
T Consensus        87 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili----~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          87 TQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL----KSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----cCCCcEEEcCCccceecc
Confidence            9999999977665432  2357888889999999999999999999999999999999    778899999999998764


Q ss_pred             ccc----ccceeecccCCCCccccC
Q psy11822        208 KAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ...    .....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~  185 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILF  185 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhcc
Confidence            321    123456778999998754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=9.5e-27  Score=187.51  Aligned_cols=160  Identities=21%  Similarity=0.215  Sum_probs=128.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..||+|.++....     ......+.+|+.+++.+.|+||+  .+++.+.  +....++||||+
T Consensus        14 ~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   84 (277)
T cd06640          14 KGSFGEVFKGIDNRTQQVVAIKIIDLEEA-----EDEIEDIQQEITVLSQCDSPYVT--KYYGSYL--KGTKLWIIMEYL   84 (277)
T ss_pred             cCCCeEEEEEEEccCCEEEEEEEEecccc-----HHHHHHHHHHHHHHHhCCCCCEe--eEEEEEE--ECCEEEEEEecC
Confidence            38999999999988999999998764321     11234668899999999999997  4444443  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..    ..+++.++..++.|++.||+|||+.+++|+||+|+||++    +.++.++|+|||++......  
T Consensus        85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL----SEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE----cCCCCEEEcccccceeccCCcc
Confidence            99997766554    357778888999999999999999999999999999999    77789999999999776542  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......++..|+|||++.+
T Consensus       157 ~~~~~~~~~~y~apE~~~~  175 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQ  175 (277)
T ss_pred             ccccccCcccccCHhHhcc
Confidence            2234567889999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=9.1e-27  Score=188.03  Aligned_cols=163  Identities=24%  Similarity=0.293  Sum_probs=126.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+|+.||+|.++.....    ......+.+|++++++++||||+  .+++++.  +....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~   81 (284)
T cd07860          10 EGTYGVVYKARNKLTGEVVALKKIRLDTET----EGVPSTAIREISLLKELNHPNIV--KLLDVIH--TENKLYLVFEFL   81 (284)
T ss_pred             CCCceEEEEEEECCCCCEEEEEEccccccc----cccchHHHHHHHHHHhcCCCCCc--chhhhcc--cCCcEEEEeecc
Confidence            389999999999989999999987643211    12234568899999999999997  5666554  344679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      .+ ++..+.... +...+++..+..++.|++.||+|||+.+++|+||+|+||++    +.++.+||+|||++......  
T Consensus        82 ~~-~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill----~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          82 HQ-DLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             cc-CHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEeeccchhhcccCcc
Confidence            75 433332221 12357888889999999999999999999999999999999    77889999999998766433  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       156 ~~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             ccccccccccccCCeEEec
Confidence            2234567889999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=5.9e-27  Score=191.21  Aligned_cols=163  Identities=20%  Similarity=0.201  Sum_probs=122.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc------cccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN------NVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~------~~~~~~l  126 (229)
                      |+||.||+|.+..+++.||+|.+......    ......+.+|+.++++++||||+.  +++++...      .....++
T Consensus        23 g~~~~v~~~~~~~~~~~~aik~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~~~l   96 (310)
T cd07865          23 GTFGEVFKARHKKTKQIVALKKVLMENEK----EGFPITALREIKILQLLKHENVVN--LIEICRTKATPYNRYKGSFYL   96 (310)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEeccCCc----CCchhHHHHHHHHHHhCCCCCccc--eEEEEecccccccCCCceEEE
Confidence            89999999999999999999987542111    111223467899999999999974  33332211      1234689


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||+.++....+...   ...+++.+++.++.|++.||.|||++|++|+||||+||++    +.++.+||+|||++...
T Consensus        97 v~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~  169 (310)
T cd07865          97 VFEFCEHDLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI----TKDGILKLADFGLARAF  169 (310)
T ss_pred             EEcCCCcCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCCCcEEECcCCCcccc
Confidence            9999987543333222   2358888999999999999999999999999999999999    77889999999999876


Q ss_pred             Cccc------ccceeecccCCCCccccC
Q psy11822        207 SKAV------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~------~~~~~gt~~y~aPE~l~~  228 (229)
                      ....      .....++..|+|||++.+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (310)
T cd07865         170 SLSKNSKPNRYTNRVVTLWYRPPELLLG  197 (310)
T ss_pred             cCCcccCCCCccCcccCccccCcHHhcC
Confidence            4321      124567888999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.7e-26  Score=184.23  Aligned_cols=161  Identities=21%  Similarity=0.253  Sum_probs=123.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccc-cccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITP-GEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+|+.||+|.++........   ....+..|... .....|+|++  .+++.+.  .....|+||||
T Consensus         6 ~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~e~~~~~~~~~~~~i~--~~~~~~~--~~~~~~lv~e~   78 (260)
T cd05611           6 KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN---QVTNVKAERAIMMIQGESPYVA--KLYYSFQ--SKDYLYLVMEY   78 (260)
T ss_pred             cCCCeeEEEEEecCCCCeEEEEEecchhhhHHH---HHHHHHHHHHHHhhcCCCCCee--eeeeeEE--cCCeEEEEEec
Confidence            489999999999889999999998754322111   11122333333 3455899997  4554443  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++++|..++..   ...+++..+..++.|++.||.|||+.+++|+||+|+||++    +..+.++|+|||++...... 
T Consensus        79 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~~-  150 (260)
T cd05611          79 LNGGDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI----DQTGHLKLTDFGLSRNGLEN-  150 (260)
T ss_pred             cCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCcEEEeecccceecccc-
Confidence            999998777654   3458888899999999999999999999999999999999    77789999999998765432 


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                       ....|++.|+|||++.+
T Consensus       151 -~~~~~~~~y~~pe~~~~  167 (260)
T cd05611         151 -KKFVGTPDYLAPETILG  167 (260)
T ss_pred             -ccCCCCcCccChhhhcC
Confidence             34568889999999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=1.1e-26  Score=185.89  Aligned_cols=162  Identities=14%  Similarity=0.069  Sum_probs=124.8

Q ss_pred             cCCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+   ...||+|.++....     ......+.+|+.+++.++||||+.  +++.+.  .....+++|
T Consensus        14 ~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~iv~   84 (266)
T cd05033          14 GGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-----DKQRLDFLTEASIMGQFDHPNIIR--LEGVVT--KSRPVMIIT   84 (266)
T ss_pred             CCccceEEEEEEccCCCCcceEEEEEcCCCCC-----hHHHHHHHHHHHHHHhCCCCCcce--EeEEEe--cCCceEEEE
Confidence            399999999987644   45899998765321     112335678999999999999974  444433  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..++....  ..+++..+..++.|++.||.|||+++|+|+||||+||++    +.++.++|+|||+++....
T Consensus        85 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili----~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          85 EYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCCEEECccchhhcccc
Confidence            9999999877755422  357888889999999999999999999999999999999    7788999999999988752


Q ss_pred             c--cc--cceeecccCCCCccccC
Q psy11822        209 A--VC--NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--~~--~~~~gt~~y~aPE~l~~  228 (229)
                      .  ..  ....+++.|+|||.+.+
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~  182 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAY  182 (266)
T ss_pred             cccceeccCCCCCccccChhhhcc
Confidence            1  11  12344567999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=1.1e-26  Score=185.30  Aligned_cols=160  Identities=21%  Similarity=0.203  Sum_probs=126.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.. +..+|+|++.....      .....+.+|+.+++.++|+||+.  +++++.  .....++||||++
T Consensus        17 g~~~~vy~~~~~~-~~~~~~k~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~~   85 (261)
T cd05148          17 GYFGEVWEGLWKN-RVRVAIKILKSDDL------LKQQDFQKEVQALKRLRHKHLIS--LFAVCS--VGEPVYIITELME   85 (261)
T ss_pred             CCCccEEEeEecC-CCcEEEEeccccch------hhHHHHHHHHHHHhcCCCcchhh--eeeeEe--cCCCeEEEEeecc
Confidence            8999999999876 89999999876422      12335678999999999999974  444433  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..++.... ...+++..+..++.|++.||.|||+.|++|+||||+||++    +.++.+||+|||.+.......  
T Consensus        86 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv----~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          86 KGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV----GEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             cCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE----cCCceEEEccccchhhcCCcccc
Confidence            999877765432 2357888889999999999999999999999999999999    777899999999998765432  


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~~~PE~~~~  178 (261)
T cd05148         161 SSDKKIPYKWTAPEAASH  178 (261)
T ss_pred             ccCCCCceEecCHHHHcc
Confidence            223445678999998754

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=7.5e-27  Score=189.80  Aligned_cols=163  Identities=17%  Similarity=0.161  Sum_probs=121.1

Q ss_pred             CCceeeeeeecCCC--------------CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc
Q psy11822         53 DDIGQVNVPTDLEG--------------GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC  118 (229)
Q Consensus        53 g~fg~Vy~a~~~~~--------------~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~  118 (229)
                      |+||.||+|.+..+              ...||+|.++....     ....+.+.+|+++++.++|+|++  .+++++. 
T Consensus        16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~ei~~l~~l~h~~i~--~~~~~~~-   87 (295)
T cd05097          16 GQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-----KTARNDFLKEIKIMSRLKNPNII--RLLGVCV-   87 (295)
T ss_pred             CCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-----HHHHHHHHHHHHHHHhCCCCCcC--eEEEEEc-
Confidence            99999999987543              23599998865311     11234578899999999999997  4444443 


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCC---------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPP---------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV  189 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~---------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~  189 (229)
                       .....++||||++++++..++....         ....+++..++.++.|++.||+|||+++++||||||+||++    
T Consensus        88 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill----  162 (295)
T cd05097          88 -SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV----  162 (295)
T ss_pred             -CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE----
Confidence             3345799999999999766543211         01135566678899999999999999999999999999999    


Q ss_pred             CCCccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        190 RQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +.++.+||+|||++.......    .....++..|+|||++.+
T Consensus       163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence            777799999999998664322    123345678999998754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1e-26  Score=186.85  Aligned_cols=160  Identities=22%  Similarity=0.246  Sum_probs=130.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+.....     ......+.+|+.+++.++|+|++.  ..+++.  +....++|+||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~~v~e~~   81 (274)
T cd06609          11 KGSFGEVYKAIDKRTNQVVAIKVIDLEEA-----EDEIEDIQQEIQFLSQCRSPYITK--YYGSFL--KGSKLWIIMEYC   81 (274)
T ss_pred             CCCCeEEEEEEECCCCeEEEEEEeecccc-----chHHHHHHHHHHHHHHcCCCCeee--eeEEEE--ECCeEEEEEEee
Confidence            38999999999999999999999865321     112335678999999999999974  444433  335679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++......    ..+++..+..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||+++.....  
T Consensus        82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~  153 (274)
T cd06609          82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL----SEEGDVKLADFGVSGQLTSTMS  153 (274)
T ss_pred             CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----CCCCCEEEcccccceeeccccc
Confidence            99997777654    268888899999999999999999999999999999999    77889999999999887643  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......|++.|+|||++.+
T Consensus       154 ~~~~~~~~~~y~~PE~~~~  172 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQ  172 (274)
T ss_pred             ccccccCCccccChhhhcc
Confidence            2345678889999999865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=5.6e-27  Score=186.35  Aligned_cols=165  Identities=21%  Similarity=0.225  Sum_probs=130.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|.+........ .....+.+.+|+.+++.++|+|++.  ++++..  .....+++|||+
T Consensus        10 ~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~--~~~~~~--~~~~~~lv~e~~   84 (258)
T cd06632          10 SGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT-GQEAVKQLEQEIALLSKLQHPNIVQ--YLGTER--EEDNLYIFLELV   84 (258)
T ss_pred             ecCCceEEEEEEcCCCcEEEEEEEEEcccccc-chHHHHHHHHHHHHHHhcCCCCchh--eeeeEe--cCCeEEEEEEec
Confidence            48999999999988999999998764321100 1123346788999999999999974  444433  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +++++..++..   ...+++..+..++.|++.||+|||+.|++|+||+|+||++    +..+.+||+|||++....... 
T Consensus        85 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~----~~~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          85 PGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV----DTNGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEccCccceecccccc
Confidence            99997777654   2347788888999999999999999999999999999999    777899999999988765432 


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||.+.+
T Consensus       158 ~~~~~~~~~y~~pe~~~~  175 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQ  175 (258)
T ss_pred             ccccCCCcceeCHHHhcC
Confidence            345678899999998753

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=1e-26  Score=185.58  Aligned_cols=159  Identities=14%  Similarity=0.145  Sum_probs=123.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+ .++..||+|.+.....       ..+.+.+|+.+++.++|+||+.  +++...  .....+++|||++
T Consensus        17 g~~g~v~~~~~-~~~~~v~iK~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   84 (261)
T cd05072          17 GQFGEVWMGYY-NNSTKVAVKTLKPGTM-------SVQAFLEEANLMKTLQHDKLVR--LYAVVT--KEEPIYIITEYMA   84 (261)
T ss_pred             cCCceEEEEEe-cCCceEEEEEccCCch-------hHHHHHHHHHHHHhCCCCCeee--EEEEEc--CCCCcEEEEecCC
Confidence            88999999986 4567899998765321       2345688999999999999974  333333  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..++.... ...+++..+..++.|++.||+|||+.+++||||||+||++    +..+.++|+|||++.......  
T Consensus        85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV----SESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe----cCCCcEEECCCccceecCCCcee
Confidence            999776654321 2346777788899999999999999999999999999999    777899999999998765432  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05072         160 AREGAKFPIKWTAPEAINF  178 (261)
T ss_pred             ccCCCccceecCCHHHhcc
Confidence             123345678999998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.93  E-value=1.1e-26  Score=183.15  Aligned_cols=154  Identities=17%  Similarity=0.125  Sum_probs=120.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      +|.||.||+|.+..+++.||+|.++....           ..+|...+....||||+  .+++++.  +....+++|||+
T Consensus         3 ~g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----------~~~~~~~~~~~~~~~i~--~~~~~~~--~~~~~~lv~e~~   67 (237)
T cd05576           3 LGVIDKVLLVMDTRTQQTFILKGLRKSSE-----------YSRERLTIIPHCVPNMV--CLHKYIV--SEDSVFLVLQHA   67 (237)
T ss_pred             ccccceEEEEEEccCCcEEEEEeecchhh-----------hhhHHHHHHhcCCCcee--ehhhhee--cCCeEEEEEecC
Confidence            59999999999999999999999876421           12233334445789997  4555544  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++..   ...+++..+..++.|+++||.|||+.|++||||||+||++    +.++.++|+|||.+....... 
T Consensus        68 ~~~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~df~~~~~~~~~~-  139 (237)
T cd05576          68 EGGKLWSHISK---FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL----DDRGHIQLTYFSRWSEVEDSC-  139 (237)
T ss_pred             CCCCHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEecccchhcccccc-
Confidence            99997665544   2358888889999999999999999999999999999999    777899999999887665432 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....++..|+|||++.+
T Consensus       140 ~~~~~~~~y~aPE~~~~  156 (237)
T cd05576         140 DGEAVENMYCAPEVGGI  156 (237)
T ss_pred             ccCCcCccccCCcccCC
Confidence            34456778999998754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.6e-27  Score=186.81  Aligned_cols=162  Identities=22%  Similarity=0.248  Sum_probs=128.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcc----ccccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCN----NVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~----~~~~~~lv  127 (229)
                      |.||.||+|.+..+++.+|+|++.....       ..+.+.+|+.+++++ .|+||+  .+++++...    .....++|
T Consensus        17 g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~e~~~l~~~~~h~~i~--~~~~~~~~~~~~~~~~~~~lv   87 (275)
T cd06608          17 GTYGKVYKARHKKTGQLVAIKIMDIIED-------EEEEIKEEYNILRKYSNHPNIA--TFYGAFIKKNPPGNDDQLWLV   87 (275)
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhcCCCChh--eEEEEEEecCCCCcceEEEEE
Confidence            8899999999988899999999875321       224568899999998 799997  444444322    23457999


Q ss_pred             eeeeeCCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        128 MEVTRRSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      |||++++++..+..... ....+++..+..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||++...
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL----TKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----ccCCeEEECCCccceec
Confidence            99999998766544311 12458888889999999999999999999999999999999    77789999999998766


Q ss_pred             Ccc--cccceeecccCCCCcccc
Q psy11822        207 SKA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       207 ~~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ...  ......|++.|+|||++.
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~  186 (275)
T cd06608         164 DSTLGRRNTFIGTPYWMAPEVIA  186 (275)
T ss_pred             ccchhhhcCccccccccCHhHhc
Confidence            442  334567899999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=8.4e-27  Score=187.50  Aligned_cols=163  Identities=16%  Similarity=0.141  Sum_probs=124.0

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+..     ++..||+|.+.....     ......+.+|+.+++.++||||+  .+++++.  .....++|
T Consensus        17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~~v   87 (277)
T cd05032          17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-----MRERIEFLNEASVMKEFNCHHVV--RLLGVVS--TGQPTLVV   87 (277)
T ss_pred             CCCceEEEEEEeccCCCCcceeEEEEecCCccC-----HHHHHHHHHHHHHHHhCCCCcee--EEEEEEc--CCCCcEEE
Confidence            8999999998764     348899999764321     11223567899999999999997  4555544  33567999


Q ss_pred             eeeeeCCCCCccCCCCCC-------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        128 MEVTRRSQYTGATAPPPP-------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      |||+++++|..++....+       ...+++..+..++.|++.||.|||+.+++||||||+||++    +.++.+||+||
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill----~~~~~~kl~df  163 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV----AEDLTVKIGDF  163 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE----cCCCCEEECCc
Confidence            999999997666543211       1235667788899999999999999999999999999999    77889999999


Q ss_pred             CcceecCcc----cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+++.....    ......++..|+|||++.+
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhc
Confidence            998766432    1233456788999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=7.3e-27  Score=186.30  Aligned_cols=163  Identities=17%  Similarity=0.105  Sum_probs=122.2

Q ss_pred             cCCceeeeeeecCCCCc-------EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         52 LDDIGQVNVPTDLEGGE-------LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~-------~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      .|+||.||+|.+..++.       ++|+|.+....      ....+.+.+|+.+++.+.|||++.  +++++.  .....
T Consensus         5 ~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~e~~~l~~~~h~~iv~--~~~~~~--~~~~~   74 (258)
T cd05078           5 QGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH------RNYSESFFEAASMMSQLSHKHLVL--NYGVCV--CGDES   74 (258)
T ss_pred             cccchhheeeeecccccccccccchhhHHhhcchh------HHHHHHHHHHHHHHHhCCCCChhh--eeeEEE--eCCCc
Confidence            48999999998765443       48888875432      122335677888999999999984  443433  23456


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC----CCCccEEEeec
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV----RQPYRVKVIDF  200 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~----~~~~~~kl~DF  200 (229)
                      ++||||+++|+|..++....  ..+++..++.++.|++.||+|||+++|+||||||+||++....    ...+.++++||
T Consensus        75 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~  152 (258)
T cd05078          75 IMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP  152 (258)
T ss_pred             EEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence            89999999999877765422  2477778889999999999999999999999999999995432    11234799999


Q ss_pred             CcceecCcccccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      |++......  ....+++.|+|||++.+
T Consensus       153 g~~~~~~~~--~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         153 GISITVLPK--EILLERIPWVPPECIEN  178 (258)
T ss_pred             ccccccCCc--hhccccCCccCchhccC
Confidence            998765443  34578889999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=1.7e-26  Score=187.22  Aligned_cols=164  Identities=19%  Similarity=0.238  Sum_probs=126.8

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|++.   .+|+.||+|+++.....  ......+.+.+|+.+++.+ +|+||+.+  .+.+.  .....++|
T Consensus        10 ~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~i~~~--~~~~~--~~~~~~lv   83 (290)
T cd05613          10 TGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV--QKAKTTEHTRTERQVLEHIRQSPFLVTL--HYAFQ--TDTKLHLI   83 (290)
T ss_pred             cCCcceEEEEEeccCCCCCceEEEEEeehhhhh--hcchHHHHHHHHHHHHHhcccCCChhce--eeEee--cCCeEEEE
Confidence            4899999999874   47899999998764221  1122334567899999999 68999743  33332  23457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++++++...+..   ...+++..+..++.|++.||.|||+.|++||||+|+||++    +.++.+||+|||++....
T Consensus        84 ~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613          84 LDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE----CCCCCEEEeeCccceecc
Confidence            999999987666544   2357788888899999999999999999999999999999    778899999999998764


Q ss_pred             cc---cccceeecccCCCCccccC
Q psy11822        208 KA---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   ......|+..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         157 EDEVERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             cccccccccccCCcccCChhhccC
Confidence            42   2234678899999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=6.9e-27  Score=188.54  Aligned_cols=164  Identities=19%  Similarity=0.191  Sum_probs=120.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccc-cccccCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITP-GEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+|+.||+|.++.......     ...+..|+.. ++.+.|||++  ++++++.  .....+++|||
T Consensus        11 ~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~~~e~~~~~~~~~~~~iv--~~~~~~~--~~~~~~lv~e~   81 (283)
T cd06617          11 RGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-----QKRLLMDLDISMRSVDCPYTV--TFYGALF--REGDVWICMEV   81 (283)
T ss_pred             ccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-----HHHHHHHHHHHHHHcCCCCee--eeeEEEe--cCCcEEEEhhh
Confidence            39999999999999999999998765321111     1122344444 4667899997  4444443  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      ++++....+.........+++..+..++.|++.||.|||++ +++||||||+||++    +.++.+||+|||++......
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          82 MDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI----NRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeecccccccccc
Confidence            98643222211111234688889999999999999999997 99999999999999    77889999999999876443


Q ss_pred             c-ccceeecccCCCCccccC
Q psy11822        210 V-CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         158 VAKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             cccccccCCccccChhhcCC
Confidence            2 233578889999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.93  E-value=9.4e-27  Score=186.51  Aligned_cols=162  Identities=15%  Similarity=0.127  Sum_probs=123.9

Q ss_pred             cCCceeeeeeecCCCC---cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGG---ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|.||.||+|.+..++   ..+|+|.++.....     .....+.+|+.+++.++||||+.  +.+++.  .....++||
T Consensus        14 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~   84 (267)
T cd05066          14 AGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-----KQRRDFLSEASIMGQFDHPNIIH--LEGVVT--KSKPVMIVT   84 (267)
T ss_pred             ccCCCceEEEEEecCCCCceEEEEEECCCCCCH-----HHHHHHHHHHHHHHhCCCCCcce--EEEEEe--cCCccEEEE
Confidence            3899999999876444   37999988653211     12345688999999999999984  444443  334679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..+.....  ..+++.++..++.|++.||+|||+.+++||||||+||++    +.++.++|+|||++.....
T Consensus        85 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili----~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          85 EYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV----NSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE----CCCCeEEeCCCCccccccc
Confidence            9999999777755422  347888889999999999999999999999999999999    7778999999999987654


Q ss_pred             ccc-----cceeecccCCCCccccC
Q psy11822        209 AVC-----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~-----~~~~gt~~y~aPE~l~~  228 (229)
                      ...     ....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~  183 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAY  183 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhcc
Confidence            321     11223457999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1095|consensus

Probab=99.93  E-value=5.8e-27  Score=210.09  Aligned_cols=173  Identities=16%  Similarity=0.156  Sum_probs=132.5

Q ss_pred             cccceeecccCCceeeeeeecCCC-Cc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh
Q psy11822         43 EARKYIFNCLDDIGQVNVPTDLEG-GE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH  117 (229)
Q Consensus        43 ~~~~~~~~~~g~fg~Vy~a~~~~~-~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~  117 (229)
                      .....++.+.|.||.||.|....- |.    .||+|.+++.     ...+....|.+|+.+|+.++||||+  ++++...
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-----~~~~~~~~Fl~Ea~~m~~f~HpNiv--~liGv~l  765 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-----SSEQEVSDFLKEALLMSKFDHPNIV--SLIGVCL  765 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-----CCHHHHHHHHHHHHHHhcCCCccee--eEEEeec
Confidence            334455556699999999986542 32    4999988774     2244556789999999999999998  5555543


Q ss_pred             cccccccceeeeeeeCCCCCccCCCCCC----CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        118 CNNVKASVQMMEVTRRSQYTGATAPPPP----AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       118 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~----~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                        +....+|++|||.+|+|..+++...+    ...++..+...++.+||+|+.||++++.|||||...|+|+    +...
T Consensus       766 --~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL----~~~r  839 (1025)
T KOG1095|consen  766 --DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL----DERR  839 (1025)
T ss_pred             --CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee----cccC
Confidence              34557999999999998877776411    2347777788999999999999999999999999999999    7778


Q ss_pred             cEEEeecCcceecCcccccce----eecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKAVCNTY----LQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~~~~~~----~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+|+.+-...+...    .-...|||||.+..
T Consensus       840 ~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d  878 (1025)
T KOG1095|consen  840 VVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD  878 (1025)
T ss_pred             cEEEcccchhHhhhhchheeccCccccceecCCHHHHhh
Confidence            999999999996544322222    22246999999864

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.93  E-value=1.4e-26  Score=191.39  Aligned_cols=165  Identities=24%  Similarity=0.311  Sum_probs=122.9

Q ss_pred             cCCceeeeeeecCCC--CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEG--GELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+  +..||+|.+......    ......+.+|+.+++.+ .||||+...............+++++
T Consensus        10 ~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~   85 (332)
T cd07857          10 QGAYGIVCSARNAETSEEETVAIKKITNVFSK----KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE   85 (332)
T ss_pred             ccCCeEEEEEEeCCCCcCceEEEEEecccccc----chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence            389999999999887  899999987643211    11223457789999888 59999843322211112234568899


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +|+.+. +......   ...+++.+++.++.|++.||.|||+.|++||||||+|||+    +.++.+||+|||+++.+..
T Consensus        86 e~~~~~-L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili----~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          86 ELMEAD-LHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV----NADCELKICDFGLARGFSE  157 (332)
T ss_pred             ecccCC-HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE----cCCCCEEeCcCCCceeccc
Confidence            998754 4333332   3468888899999999999999999999999999999999    7788999999999987643


Q ss_pred             c------cccceeecccCCCCccccC
Q psy11822        209 A------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .      ......||+.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~  183 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLS  183 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhC
Confidence            2      1234578999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=8.9e-27  Score=192.85  Aligned_cols=161  Identities=30%  Similarity=0.403  Sum_probs=125.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+|+.+|+|.+......    ......+.+|+.+++.+ +||||+  .+++++...+....++||||+
T Consensus        18 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~ni~--~~~~~~~~~~~~~~~lv~e~~   91 (337)
T cd07852          18 GAYGIVWKAIDRRTKEVVALKKIFDAFRN----ATDAQRTFREIMFLQELGDHPNIV--KLLNVIKAENDKDIYLVFEYM   91 (337)
T ss_pred             CCCeeEEEEEEcCCCeEEEEEeeccccCc----chhhhhhhHHHHHHHHhcCCCCcc--ceeeeeccCCCceEEEEeccc
Confidence            89999999999889999999987543211    11223457799999999 999997  455555444445679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++ ++..+...    ..+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  
T Consensus        92 ~~-~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill----~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          92 ET-DLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL----NSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             cc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCcEEEeeccchhccccccc
Confidence            85 54444333    256777788899999999999999999999999999999    88889999999999866432  


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......|++.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             cccCcchhcccccccccCceeeec
Confidence                 2234578999999998743

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.4e-26  Score=190.95  Aligned_cols=162  Identities=27%  Similarity=0.362  Sum_probs=127.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc---ccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN---VKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~---~~~~~lv~e  129 (229)
                      |+||.||+|++..+++.||+|.+......    ....+.+.+|+.+++.++|+||+  .+.+++....   ...+|++||
T Consensus        11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~~~~~~~~~~~lv~e   84 (330)
T cd07834          11 GAYGVVCSAVDKRTGRKVAIKKISNVFDD----LIDAKRILREIKLLRHLRHENII--GLLDILRPPSPEDFNDVYIVTE   84 (330)
T ss_pred             CCCeEEEEEEeCCCCcEEEEEeecccccc----chhhhhHHHHHHHHHhcCCcchh--hhhhhhcccCcccccceEEEec
Confidence            89999999999888999999988764211    12234568899999999999997  4554443322   235799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++ ++...+..   ...+++..++.++.|++.||+|||+.||+||||||+|||+    +.++.++|+|||++......
T Consensus        85 ~~~~-~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili----~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          85 LMET-DLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV----NSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             chhh-hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccCceEeeccc
Confidence            9986 44444333   2368888889999999999999999999999999999999    77789999999999887554


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~  180 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLS  180 (330)
T ss_pred             ccccccccccccccCcCCceeeec
Confidence            2     345678899999999865

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=1e-26  Score=190.10  Aligned_cols=159  Identities=26%  Similarity=0.281  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|++..+++.||+|.+......   .......+.+|+.+++.++|||++  .+.+++.  .....++||||+.
T Consensus        26 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv--~~~~~~~--~~~~~~lv~e~~~   98 (307)
T cd06607          26 GSFGAVYFARDVRTNEVVAIKKMSYSGKQ---SNEKWQDIIKEVRFLQQLRHPNTI--EYKGCYL--REHTAWLVMEYCL   98 (307)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEeccccC---cHHHHHHHHHHHHHHHhCCCCCEE--EEEEEEE--eCCeEEEEHHhhC
Confidence            88999999999889999999987542111   112233568899999999999997  4444443  3345789999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++.+..+...   ...+++.++..++.|++.||.|||+.+++||||+|+||++    +.++.++|+|||++......  .
T Consensus        99 g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~----~~~~~~kL~dfg~~~~~~~~--~  169 (307)
T cd06607          99 GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL----TEPGTVKLADFGSASLVSPA--N  169 (307)
T ss_pred             CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE----CCCCCEEEeecCcceecCCC--C
Confidence            6554433222   2357888889999999999999999999999999999999    77789999999999766443  3


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      ...|++.|+|||++.
T Consensus       170 ~~~~~~~y~aPE~~~  184 (307)
T cd06607         170 SFVGTPYWMAPEVIL  184 (307)
T ss_pred             CccCCccccCceeee
Confidence            457888999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=2e-26  Score=186.82  Aligned_cols=162  Identities=23%  Similarity=0.225  Sum_probs=125.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccc---ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNN---VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~---~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.+|+|++.....       ....+.+|+.+++++ +|||++.  +++++...+   ....++||
T Consensus        33 g~~~~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~e~~~l~~l~~h~ni~~--~~~~~~~~~~~~~~~~~lv~  103 (291)
T cd06639          33 GTYGKVYKVTNKKDGSLAAVKILDPISD-------VDEEIEAEYNILQSLPNHPNVVK--FYGMFYKADKLVGGQLWLVL  103 (291)
T ss_pred             CCCeEEEEEEECCCCCEEEEEEeccccc-------HHHHHHHHHHHHHHhcCCCCeEE--EEEEEEeccccCCCeeEEEE
Confidence            8999999999999999999999865211       122446788888888 8999974  444433211   23579999


Q ss_pred             eeeeCCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ||++++++..++... .....+++..++.++.|++.||.|||+.+++||||||+||++    +..+.+||+|||++....
T Consensus       104 ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili----~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         104 ELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL----TTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             EECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE----cCCCCEEEeecccchhcc
Confidence            999999976654321 113457888889999999999999999999999999999999    777899999999988764


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ..  ......|+..|+|||++.
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~  201 (291)
T cd06639         180 STRLRRNTSVGTPFWMAPEVIA  201 (291)
T ss_pred             cccccccCccCCccccChhhhc
Confidence            42  223467889999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.5e-26  Score=191.98  Aligned_cols=160  Identities=26%  Similarity=0.345  Sum_probs=124.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----~~~~~lv~  128 (229)
                      |.||.||+|.+..+|+.||+|.+......    ......+.+|+.+++.++||||+.  +.+.+....    ...+++||
T Consensus        26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~lv~   99 (343)
T cd07880          26 GAYGTVCSALDRRTGAKVAIKKLYRPFQS----ELFAKRAYRELRLLKHMKHENVIG--LLDVFTPDLSLDRFHDFYLVM   99 (343)
T ss_pred             cCCeEEEEEEECCCCcEEEEEEecccccc----hHHHHHHHHHHHHHHhcCCCCccc--eeeeecCCccccccceEEEEE
Confidence            89999999999999999999987643211    112235678999999999999973  444332211    12358999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+ ++++..+...    ..+++..+..++.|++.||+|||+.||+||||||+||++    +.++.++|+|||++.....
T Consensus       100 e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill----~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880         100 PFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQTDS  170 (343)
T ss_pred             ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeeccccccccc
Confidence            998 5565555443    358888899999999999999999999999999999999    7778999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .. ....+++.|+|||++.+
T Consensus       171 ~~-~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         171 EM-TGYVVTRWYRAPEVILN  189 (343)
T ss_pred             Cc-cccccCCcccCHHHHhC
Confidence            32 34577889999998754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG1094|consensus

Probab=99.93  E-value=8.2e-27  Score=195.47  Aligned_cols=160  Identities=19%  Similarity=0.232  Sum_probs=130.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||+|.+|.- ..+.+||+|.++....     ......|.+||++|.+++||||+  ++++.  |..+..+++++||++
T Consensus       549 GqFGEVhLCev-eg~lkVAVK~Lr~~a~-----~~~r~~F~kEIkiLsqLkhPNIv--eLvGV--C~~DePicmI~EYmE  618 (807)
T KOG1094|consen  549 GQFGEVHLCEV-EGPLKVAVKILRPDAT-----KNARNDFLKEIKILSRLKHPNIV--ELLGV--CVQDDPLCMITEYME  618 (807)
T ss_pred             cccceeEEEEe-cCceEEEEeecCcccc-----hhHHHHHHHHHHHHhccCCCCee--EEEee--eecCCchHHHHHHHh
Confidence            88999999985 4579999999988533     22345789999999999999997  56654  446667899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|.|.+++...... .+..+...+|+.||++|++||.+.++|||||.+.|+|+    +.++++||+|||.|+-+-+....
T Consensus       619 nGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv----~~e~~iKiadfgmsR~lysg~yy  693 (807)
T KOG1094|consen  619 NGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV----DGEFTIKIADFGMSRNLYSGDYY  693 (807)
T ss_pred             cCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhhchhhccccccceee----cCcccEEecCcccccccccCCce
Confidence            99988887764322 24555667899999999999999999999999999999    99999999999999977554332


Q ss_pred             ----ceeecccCCCCcccc
Q psy11822        213 ----TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ----~~~gt~~y~aPE~l~  227 (229)
                          ..+-...|||||.+.
T Consensus       694 ~vqgr~vlpiRwmawEsil  712 (807)
T KOG1094|consen  694 RVQGRAVLPIRWMAWESIL  712 (807)
T ss_pred             eeecceeeeeeehhHHHHH
Confidence                344557899999874

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=1.7e-26  Score=186.08  Aligned_cols=159  Identities=22%  Similarity=0.249  Sum_probs=128.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+.....     ......+.+|+.+++.++||||+  ..++++.  .....++||||++
T Consensus        15 G~~~~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   85 (277)
T cd06641          15 GSFGEVFKGIDNRTQKVVAIKIIDLEEA-----EDEIEDIQQEITVLSQCDSPYVT--KYYGSYL--KDTKLWIIMEYLG   85 (277)
T ss_pred             cCCeEEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHHHhcCCCCEe--EEEEEEE--eCCeEEEEEEeCC
Confidence            8999999999988899999998754311     11234668899999999999997  4444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..++..    ..+++..+..++.|++.|+.|||+.|++|+||+|+||++    +.++.++|+|||++......  .
T Consensus        86 ~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i----~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          86 GGSALDLLEP----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE----CCCCCEEEeecccceecccchhh
Confidence            9997776554    357888889999999999999999999999999999999    77789999999998776543  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~y~~PE~~~~  175 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hccccCCccccChhhhcc
Confidence            234578889999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.2e-26  Score=186.04  Aligned_cols=169  Identities=14%  Similarity=0.105  Sum_probs=123.6

Q ss_pred             cCCceeeeeeecCC---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--ccccccce
Q psy11822         52 LDDIGQVNVPTDLE---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--NNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~~~~~~l  126 (229)
                      .|+||.||+|.+..   ++..||+|.++.....    ....+.+.+|+..++.++|||++.+..+.....  ......++
T Consensus         9 ~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   84 (273)
T cd05035           9 EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT----YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMV   84 (273)
T ss_pred             cCCCceEEEEEEecCCCCcceEEEEEeccCcCC----HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEE
Confidence            49999999998754   3478999987643211    122346788999999999999984332221111  11234689


Q ss_pred             eeeeeeCCCCCccCCCC---CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        127 MMEVTRRSQYTGATAPP---PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~---~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +|||++++++..++...   .....+++..+..++.|++.||.|||+.+++||||||+||++    +..+.+||+|||++
T Consensus        85 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~  160 (273)
T cd05035          85 ILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML----REDMTVCVADFGLS  160 (273)
T ss_pred             EEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE----CCCCeEEECCccce
Confidence            99999999976554221   112357778889999999999999999999999999999999    77789999999999


Q ss_pred             eecCccc----ccceeecccCCCCccccC
Q psy11822        204 SHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +......    .....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD  189 (273)
T ss_pred             eeccccccccccccccCCccccCHhhccc
Confidence            8764431    112334567999998754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=1.6e-26  Score=184.14  Aligned_cols=158  Identities=18%  Similarity=0.128  Sum_probs=122.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. .+..+|+|.+.....       ..+.+.+|+.+++.++||||+.  +++++.  .....+++|||+.
T Consensus        15 G~~~~vy~~~~~-~~~~~aik~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   82 (256)
T cd05113          15 GQFGVVKYGKWR-GQYDVAIKMIKEGSM-------SEDEFIEEAKVMMKLSHEKLVQ--LYGVCT--KQRPIYIVTEYMS   82 (256)
T ss_pred             cccceEEEEEec-CCCcEEEEEcCCCcc-------cHHHHHHHHHHHhcCCCCCeee--EEEEEc--cCCCcEEEEEcCC
Confidence            889999999875 345699998765321       1235688999999999999974  444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++..++....  ..+++..++.++.|++.||+|||+.|++|+||||+||++    +.++.+||+|||+++........
T Consensus        83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili----~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05113          83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV----DDQGCVKVSDFGLSRYVLDDEYT  156 (256)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCCEEECCCccceecCCCcee
Confidence            998776654422  257888889999999999999999999999999999999    77789999999999876443222


Q ss_pred             ---ceeecccCCCCccccC
Q psy11822        213 ---TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ---~~~gt~~y~aPE~l~~  228 (229)
                         ...++..|+|||++.+
T Consensus       157 ~~~~~~~~~~y~~pe~~~~  175 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLY  175 (256)
T ss_pred             ecCCCccChhhCCHHHHhc
Confidence               2334567999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.93  E-value=2.5e-26  Score=186.43  Aligned_cols=162  Identities=16%  Similarity=0.173  Sum_probs=124.4

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+.     .++..+|+|.+.....      ...+.+.+|+.+++.++|+||+.  +.+++.  .....++|
T Consensus        16 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv   85 (291)
T cd05094          16 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL------AARKDFQREAELLTNLQHEHIVK--FYGVCG--DGDPLIMV   85 (291)
T ss_pred             cCCCeEEEeEeeccCCCCcceeeEEEecCCccH------HHHHHHHHHHHHHhcCCCCCcce--EEEEEc--cCCceEEE
Confidence            889999999753     3456799998765322      12235688999999999999984  444433  33457999


Q ss_pred             eeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        128 MEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      |||++++++..++....             ....+++..++.++.|++.||+|||++||+||||||+||++    +.++.
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~----~~~~~  161 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV----GANLL  161 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE----ccCCc
Confidence            99999999776654321             12347777889999999999999999999999999999999    77789


Q ss_pred             EEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ++|+|||++.......    .....++..|+|||++.+
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  199 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  199 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhcc
Confidence            9999999997664431    233556788999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.93  E-value=2.2e-26  Score=182.84  Aligned_cols=158  Identities=20%  Similarity=0.255  Sum_probs=129.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||+|.+..++..+|+|.+.....        .+.+.+|+++++.++|+|++  .+++.+.  .....|+++||++
T Consensus        14 g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~e~~~~~~l~~~~i~--~~~~~~~--~~~~~~l~~e~~~   81 (256)
T cd06612          14 GSYGSVYKAIHKETGQVVAIKVVPVEED--------LQEIIKEISILKQCDSPYIV--KYYGSYF--KNTDLWIVMEYCG   81 (256)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEeecHHH--------HHHHHHHHHHHHhCCCCcEe--eeeeeee--cCCcEEEEEecCC
Confidence            8899999999988899999999875321        34678899999999999997  4554443  3356799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..++...  ...+++..+..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||++......  .
T Consensus        82 ~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~----~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          82 AGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL----NEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----CCCCcEEEcccccchhcccCccc
Confidence            99987765432  2357888899999999999999999999999999999999    77789999999999876543  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|+..|+|||++.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~  173 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQE  173 (256)
T ss_pred             cccccCCccccCHHHHhc
Confidence            234568889999998765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=1.6e-26  Score=183.57  Aligned_cols=165  Identities=21%  Similarity=0.174  Sum_probs=128.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.+|+|.+......    ......+.+|+++++.++|||++.  +++.+.  .....++||||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~--~~~~~~--~~~~~~lv~e~~   81 (256)
T cd08220          10 RGAFGIVHLCRRKADQKLVIIKQIPVEQMT----KDERLAAQNECQVLKLLSHPNIIE--YYENFL--EDKALMIVMEYA   81 (256)
T ss_pred             ccCceEEEEEEEcCCCcEEEEEEEeccccc----cHHHHHHHHHHHHHhhCCCCchhh--eeeeEe--cCCEEEEEEecC
Confidence            389999999999999999999998654221    122346788999999999999974  343333  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      +++++..++.... ...+++..++.++.|++.||.|||++|++|+||+|+||++.   ..++.++|+|||.+...... .
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          82 PGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD---KHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             CCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEEccCCCceecCCCcc
Confidence            9999776654421 22477888899999999999999999999999999999992   13347899999999877543 2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (256)
T cd08220         158 AYTVVGTPCYISPELCEG  175 (256)
T ss_pred             ccccccCCcccCchhccC
Confidence            234678899999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=2.4e-26  Score=186.58  Aligned_cols=163  Identities=25%  Similarity=0.283  Sum_probs=122.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.+|.||+|.+..+|+.||+|.+......    ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   84 (294)
T PLN00009         13 GTYGVVYKARDRVTNETIALKKIRLEQED----EGVPSTAIREISLLKEMQHGNIV--RLQDVVH--SEKRLYLVFEYLD   84 (294)
T ss_pred             CCCEEEEEEEecCCCcEEEEEehhhcccc----ccchHHHHHHHHHHHhccCCCEe--eEEEEEe--cCCeEEEEEeccc
Confidence            88999999999989999999987653211    12234567899999999999997  4444443  3346799999997


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++.+..+... . ...+++..+..++.|++.||.|||+++++||||+|+||++..   .++.+||+|||++......  .
T Consensus        85 ~~l~~~~~~~-~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~---~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         85 LDLKKHMDSS-P-DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR---RTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             ccHHHHHHhC-C-CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC---CCCEEEEcccccccccCCCccc
Confidence            6544333222 1 122456667789999999999999999999999999999932   3457999999999765432  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||++.+
T Consensus       160 ~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             cccCceeecccCHHHHhC
Confidence            234577899999998754

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.93  E-value=2.6e-26  Score=187.44  Aligned_cols=162  Identities=19%  Similarity=0.129  Sum_probs=123.5

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++     ..++..+|+|.++....     ....+.+.+|+.+++++ +||||+.  +++++.  .....++
T Consensus        46 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv~--~~~~~~--~~~~~~l  116 (302)
T cd05055          46 GAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-----SSEREALMSELKIMSHLGNHENIVN--LLGACT--IGGPILV  116 (302)
T ss_pred             cCCeeEEEEEEecCCCCCceeEEEEEecCccCC-----hHHHHHHHHHHHHHHhccCCCCcce--EEEEEe--cCCceEE
Confidence            89999999975     23466899998765311     11234568899999999 7999984  444433  3345799


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +|||+++++|..++.... ...+++.++..++.|++.||.|||+++|+|+||||+||++    +.++.++|+|||+++..
T Consensus       117 v~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~~l~dfg~~~~~  191 (302)
T cd05055         117 ITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL----THGKIVKICDFGLARDI  191 (302)
T ss_pred             EEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE----cCCCeEEECCCcccccc
Confidence            999999999776654322 1237888889999999999999999999999999999999    77779999999999866


Q ss_pred             Cccc----ccceeecccCCCCccccC
Q psy11822        207 SKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ....    .....++..|+|||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         192 MNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             cCCCceeecCCCCcccccCCHhhhcc
Confidence            4321    123345678999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=2.1e-26  Score=185.77  Aligned_cols=162  Identities=21%  Similarity=0.256  Sum_probs=125.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhc----ccccccce
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHC----NNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~----~~~~~~~l  126 (229)
                      .|+||.||+|.+..+++.+|+|++.....       ....+.+|+.+++.+ +|+|++..  ++++..    ......++
T Consensus        26 ~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-------~~~~~~~e~~~l~~~~~h~~i~~~--~~~~~~~~~~~~~~~~~i   96 (282)
T cd06636          26 NGTYGQVYKGRHVKTGQLAAIKVMDVTED-------EEEEIKLEINMLKKYSHHRNIATY--YGAFIKKSPPGHDDQLWL   96 (282)
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEEecChH-------HHHHHHHHHHHHHHhcCCCcEEEE--eeehhcccccCCCCEEEE
Confidence            39999999999999999999998765311       123457788888888 79999743  333321    12345799


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +|||++++++..++.... ...+++..+..++.|++.||+|||+.+|+|+||+|+||++    +..+.++|+|||++...
T Consensus        97 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili----~~~~~~~l~dfg~~~~~  171 (282)
T cd06636          97 VMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQL  171 (282)
T ss_pred             EEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCcchhhh
Confidence            999999998766654322 2346777788899999999999999999999999999999    77789999999998765


Q ss_pred             Ccc--cccceeecccCCCCcccc
Q psy11822        207 SKA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       207 ~~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ...  ......|++.|+|||++.
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         172 DRTVGRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             hccccCCCcccccccccCHhhcC
Confidence            432  234567899999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.93  E-value=1.9e-26  Score=185.75  Aligned_cols=161  Identities=24%  Similarity=0.357  Sum_probs=123.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|.++......    ... ...+|+..+.++ .|+|++  .+++++........++||||
T Consensus         9 ~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~----~~~-~~~~e~~~l~~l~~h~~i~--~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           9 EGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL----EQV-NNLREIQALRRLSPHPNIL--RLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ccccceEEEEEEcCCCcEEEEEEehhccCCc----hhh-hHHHHHHHHhhcCCCCCcc--ceEEEEecCCCCcEEEEEec
Confidence            3889999999999899999999887532111    111 224678888888 499997  45545444333567999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++.+..+...   ...+++.++..++.|++.||+|||+.+++||||+|+||++    +. +.+||+|||++...... 
T Consensus        82 ~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l----~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          82 MDMNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI----KD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             CCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----cC-CCeEEEecccccccccCC
Confidence            987555544332   2358888899999999999999999999999999999999    66 89999999999876443 


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      ......+++.|+|||++.
T Consensus       154 ~~~~~~~~~~y~aPE~~~  171 (282)
T cd07831         154 PYTEYISTRWYRAPECLL  171 (282)
T ss_pred             CcCCCCCCcccCChhHhh
Confidence            223456888999999764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=2.3e-26  Score=186.93  Aligned_cols=158  Identities=22%  Similarity=0.240  Sum_probs=127.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|.+....      ....+.+.+|+.+++.++|||++  .+.+.+..  ....|+|+||++
T Consensus        30 g~~g~v~~~~~~~~~~~v~iK~~~~~~------~~~~~~~~~e~~~l~~l~hp~i~--~~~~~~~~--~~~~~lv~e~~~   99 (293)
T cd06647          30 GASGTVYTAIDVATGQEVAIKQMNLQQ------QPKKELIINEILVMRENKHPNIV--NYLDSYLV--GDELWVVMEYLA   99 (293)
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEecccc------chHHHHHHHHHHHHhhcCCCCee--ehhheeee--CCcEEEEEecCC
Confidence            889999999988889999999875421      12234568899999999999997  45554432  345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++.++..++.|++.||.|||++|++|+||+|+||++    +.++.++|+|||++......  .
T Consensus       100 ~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili----~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647         100 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             CCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE----cCCCCEEEccCcceecccccccc
Confidence            9998777654    247777888999999999999999999999999999999    77789999999998766443  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       172 ~~~~~~~~~y~~PE~~~~  189 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTR  189 (293)
T ss_pred             cccccCChhhcCchhhcc
Confidence            234578889999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.93  E-value=2.1e-26  Score=187.40  Aligned_cols=164  Identities=17%  Similarity=0.068  Sum_probs=119.9

Q ss_pred             cCCceeeeeeecCCCCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..++.  .+|+|.++....     ....+.+.+|+.+++++ +||||+  .+++++.  .....+++|
T Consensus        12 ~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv--~~~~~~~--~~~~~~lv~   82 (297)
T cd05089          12 EGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS-----ENDHRDFAGELEVLCKLGHHPNII--NLLGACE--NRGYLYIAI   82 (297)
T ss_pred             CCCcceEEEEEecCCCCcceeEEEEccccCC-----HHHHHHHHHHHHHHHhhcCCCchh--heEEEEc--cCCcceEEE
Confidence            39999999999876664  478887763211     11223568899999888 799997  4444443  334579999


Q ss_pred             eeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccE
Q psy11822        129 EVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                      ||++++++..++....             ....+++..+..++.|++.||+|||++||+||||||+||++    +.++.+
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill----~~~~~~  158 (297)
T cd05089          83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV----GENLAS  158 (297)
T ss_pred             EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE----CCCCeE
Confidence            9999998765543311             11246777888999999999999999999999999999999    777899


Q ss_pred             EEeecCcceecCcccc-cceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKAVC-NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~~~-~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||++........ .....+..|+|||++.+
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY  192 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhcc
Confidence            9999999875432211 12233456999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.93  E-value=1.9e-26  Score=183.56  Aligned_cols=158  Identities=19%  Similarity=0.174  Sum_probs=121.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|...  |..+|+|.++...        ..+.+.+|+.+++.++|+|++.  .+++.. ......+++|||+
T Consensus        16 ~g~~~~v~~~~~~--~~~~~~k~~~~~~--------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~-~~~~~~~lv~e~~   82 (256)
T cd05082          16 KGEFGDVMLGDYR--GNKVAVKCIKNDA--------TAQAFLAEASVMTQLRHSNLVQ--LLGVIV-EEKGGLYIVTEYM   82 (256)
T ss_pred             ccCCCeEEEEEEc--CCcEEEEEeCCCc--------hHHHHHHHHHHHHhCCCCCeee--EEEEEE-cCCCceEEEEECC
Confidence            3889999999865  8899999876421        2235678999999999999974  333221 1223478999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++.... ...+++..+..++.|++.||+|||++|++||||||+||++    +.++.+||+|||++....... 
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~----~~~~~~kl~dfg~~~~~~~~~-  156 (256)
T cd05082          83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-  156 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE----cCCCcEEecCCccceeccccC-
Confidence            9999766654422 1247777888999999999999999999999999999999    777899999999998664432 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....++..|+|||++.+
T Consensus       157 ~~~~~~~~y~aPE~~~~  173 (256)
T cd05082         157 DTGKLPVKWTAPEALRE  173 (256)
T ss_pred             CCCccceeecCHHHHcc
Confidence            33445568999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=2e-26  Score=183.54  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=124.5

Q ss_pred             cCCceeeeeeecCCCC---cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGG---ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..++   ..+|+|.+......     ...+.+.+|+.+++.+.|+|++.  ++++..   ....++||
T Consensus         5 ~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~---~~~~~~v~   74 (257)
T cd05060           5 HGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-----AGKKEFLREASVMAQLDHPCIVR--LIGVCK---GEPLMLVM   74 (257)
T ss_pred             ccCceeEEEeEeeccCCCcceEEEEecccccch-----HHHHHHHHHHHHHHhcCCCCeee--EEEEEc---CCceEEEE
Confidence            4899999999876554   78999998764322     12335688999999999999974  444433   23468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..++..   ...+++..++.++.|++.||+|||..+++|+||||+||++    +.++.+||+|||+++....
T Consensus        75 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili----~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060          75 ELAPLGPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL----VNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             EeCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE----cCCCcEEeccccccceeec
Confidence            99999997777665   2357888899999999999999999999999999999999    7778999999999987643


Q ss_pred             ccc-----cceeecccCCCCccccC
Q psy11822        209 AVC-----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~-----~~~~gt~~y~aPE~l~~  228 (229)
                      ...     ....++..|+|||++.+
T Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05060         148 GSDYYRATTAGRWPLKWYAPECINY  172 (257)
T ss_pred             CCcccccccCccccccccCHHHhcC
Confidence            311     11223457999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.3e-26  Score=186.42  Aligned_cols=160  Identities=21%  Similarity=0.242  Sum_probs=127.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc---Cccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN---HAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+++.||+|.++....     ......+.+|+.+++.+.   |||++.  +++++.  .....++||
T Consensus        11 ~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~vi~--~~~~~~--~~~~~~lv~   81 (277)
T cd06917          11 RGAYGAVYRGKHVPTGRVVALKIINLDTP-----DDDVSDIQREVALLSQLRQSQPPNITK--YYGSYL--KGPRLWIIM   81 (277)
T ss_pred             ccCCceEEEEEEcCCCcEEEEEEecCCCC-----chhHHHHHHHHHHHHHhccCCCCCeee--Eeeeee--eCCEEEEEE
Confidence            49999999999999999999998764311     112335578888888886   999974  444433  334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..+...    ..+++..+..++.|++.||.|||+.|++|+||+|+||++    +..+.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV----TNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE----cCCCCEEEccCCceeecCC
Confidence            99999998777554    357888889999999999999999999999999999999    7778999999999987754


Q ss_pred             c--cccceeecccCCCCccccC
Q psy11822        209 A--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      .  ......|+..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917         154 NSSKRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             CccccccccCCcceeCHHHhcc
Confidence            3  2344578899999998753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.93  E-value=1.9e-26  Score=188.25  Aligned_cols=163  Identities=22%  Similarity=0.244  Sum_probs=124.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc------cccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN------NVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~------~~~~~~l  126 (229)
                      |+||.||+|++..+++.+|+|.+......    ......+.+|+++++.++||||+.  +++++...      ....+++
T Consensus        19 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~~~~~~~~~~~~~~l   92 (311)
T cd07866          19 GTFGEVYKARQIKTGRVVALKKILMHNEK----DGFPITALREIKILKKLKHPNVVP--LIDMAVERPDKSKRKRGSVYM   92 (311)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEEeccCC----CCcchhHHHHHHHHHhcCCCCccc--hhhheecccccccccCceEEE
Confidence            89999999999999999999987653211    111224578999999999999974  44443221      1234689


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||+....+..+...   ...+++..+..++.|+++||+|||+.|++|+||||+||++    +.++.++|+|||+++..
T Consensus        93 v~~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          93 VTPYMDHDLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI----DNQGILKIADFGLARPY  165 (311)
T ss_pred             EEecCCcCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEECcCccchhc
Confidence            9999987654444332   2358888999999999999999999999999999999999    88889999999999866


Q ss_pred             Cccc-------------ccceeecccCCCCccccC
Q psy11822        207 SKAV-------------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~-------------~~~~~gt~~y~aPE~l~~  228 (229)
                      ....             .....|++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhC
Confidence            4321             123467888999998754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=2.7e-26  Score=190.66  Aligned_cols=160  Identities=25%  Similarity=0.367  Sum_probs=122.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||+|++......    ....+.+.+|+.++++++||||+.  +.+++...    .....++++
T Consensus        28 G~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~lv~  101 (345)
T cd07877          28 GAYGSVCAAFDTKTGLRVAVKKLSRPFQS----IIHAKRTYRELRLLKHMKHENVIG--LLDVFTPARSLEEFNDVYLVT  101 (345)
T ss_pred             cCCeEEEEEEEcCCCeEEEEEEecCcchh----hHHHHHHHHHHHHHHHcCCCcccc--eeeeeeecccccccccEEEEe
Confidence            89999999999899999999998753221    112335678999999999999974  33333211    123357788


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +++ ++++..+...    ..+++..+..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++.....
T Consensus       102 ~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877         102 HLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTDD  172 (345)
T ss_pred             hhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE----cCCCCEEEecccccccccc
Confidence            876 5555544433    357888889999999999999999999999999999999    7778999999999986544


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....|++.|+|||++.+
T Consensus       173 ~-~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         173 E-MTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             c-ccccccCCCccCHHHHhC
Confidence            3 245678899999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=2e-26  Score=186.71  Aligned_cols=163  Identities=15%  Similarity=0.151  Sum_probs=118.8

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+..     .+..||+|.+.....     ......+.+|+.+++.++||||+.  +++.+.  .....++|
T Consensus        17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv   87 (288)
T cd05061          17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLNEASVMKGFTCHHVVR--LLGVVS--KGQPTLVV   87 (288)
T ss_pred             CCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-----HHHHHHHHHHHHHHHhCCCCCeee--EEEEEc--CCCCcEEE
Confidence            8999999997542     355899998764321     111224578999999999999974  444333  33457999


Q ss_pred             eeeeeCCCCCccCCCCCC-------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        128 MEVTRRSQYTGATAPPPP-------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      |||+++|+|..++.....       ...++...+..++.|++.||.|||+++|+||||||+||++    +.++.++|+||
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili----~~~~~~~L~Df  163 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV----AHDFTVKIGDF  163 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE----cCCCcEEECcC
Confidence            999999997766543111       1123334567799999999999999999999999999999    77789999999


Q ss_pred             CcceecCccc----ccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      |+++......    .....++..|+|||++.+
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             CccccccccccccccCCCcccccccCHHHhcc
Confidence            9998654321    122345677999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=2.4e-26  Score=183.36  Aligned_cols=158  Identities=18%  Similarity=0.168  Sum_probs=122.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..+|+|.+....       ...+.+.+|+.++++++|+|++.  .+++..   ....+++|||++
T Consensus        17 g~~~~v~~~~~~-~~~~~~~k~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~--~~~~~~---~~~~~lv~e~~~   83 (260)
T cd05070          17 GQFGEVWMGTWN-GNTKVAVKTLKPGT-------MSPESFLEEAQIMKKLRHDKLVQ--LYAVVS---EEPIYIVTEYMS   83 (260)
T ss_pred             ccCceEEEEEec-CCceeEEEEecCCC-------CCHHHHHHHHHHHHhcCCCceEE--EEeEEC---CCCcEEEEEecC
Confidence            999999999865 56789999887532       12235688999999999999974  333332   234689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      ++++..++.... ...+++..++.++.|++.||+|||+.+++||||||+||++    +.++.++|+|||++........ 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          84 KGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV----GDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----eCCceEEeCCceeeeeccCcccc
Confidence            999776654322 2347888889999999999999999999999999999999    7778999999999987654321 


Q ss_pred             --cceeecccCCCCccccC
Q psy11822        212 --NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 --~~~~gt~~y~aPE~l~~  228 (229)
                        ....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             cccCCCCCccccChHHHhc
Confidence              22345567999998754

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.4e-26  Score=185.32  Aligned_cols=160  Identities=19%  Similarity=0.150  Sum_probs=123.2

Q ss_pred             CCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+    .+|+|.+.....     ......+.+|+.+++.++|||++.  +++++..   ...++||
T Consensus        18 g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~~---~~~~~v~   87 (279)
T cd05057          18 GAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-----PKANKEILDEAYVMASVDHPHVVR--LLGICLS---SQVQLIT   87 (279)
T ss_pred             CCCccEEEEEEecCCCCcceEEEEEeccCCCC-----HHHHHHHHHHHHHHHhCCCCCcce--EEEEEec---CceEEEE
Confidence            9999999999876665    689998765321     122345688999999999999974  4443332   4578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++|++...+....  ..+++..+..++.|++.||+|||+.+++||||||+||++    +..+.+||+|||+++....
T Consensus        88 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          88 QLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             ecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE----cCCCeEEECCCcccccccC
Confidence            9999999776655422  247888899999999999999999999999999999999    7777999999999987654


Q ss_pred             ccc----cceeecccCCCCccccC
Q psy11822        209 AVC----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~----~~~~gt~~y~aPE~l~~  228 (229)
                      ...    ....++..|+|||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILH  185 (279)
T ss_pred             cccceecCCCcccccccCHHHhhc
Confidence            311    11223567999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=2.5e-26  Score=185.37  Aligned_cols=163  Identities=25%  Similarity=0.303  Sum_probs=127.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.+|+|.+.....    .......+.+|+.+++.++|+|++  .+.++.........++||||++
T Consensus        10 g~~~~vy~~~~~~~~~~~~~K~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07840          10 GTYGQVYKARNKKTGELVALKKIRMENE----KEGFPITAIREIKLLQKLRHPNIV--RLKEIVTSKGKGSIYMVFEYMD   83 (287)
T ss_pred             CCCeEEEEEEECCCCeEEEEEEEecccc----cccchHHHHHHHHHHHhccCCCee--eheeeEecCCCCcEEEEecccc
Confidence            8899999999998999999999886421    112223567899999999999997  4444443322256899999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      + ++..+....  ...+++..++.++.|++.||+|||+.|++|+||+|+||++    +.++.++|+|||++.......  
T Consensus        84 ~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~----~~~~~~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          84 H-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI----NNDGVLKLADFGLARPYTKRNSA  156 (287)
T ss_pred             c-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----cCCCCEEEccccceeeccCCCcc
Confidence            6 444443331  1358888899999999999999999999999999999999    778899999999998775542  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||.+.+
T Consensus       157 ~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         157 DYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             cccccccccccCCceeeEc
Confidence             334567888999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.93  E-value=2.6e-26  Score=185.28  Aligned_cols=162  Identities=19%  Similarity=0.201  Sum_probs=122.7

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|..     ..++..+|+|.+.....      .....+.+|+++++.++|+||+.  +++++.  .....+++
T Consensus        16 g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv   85 (280)
T cd05092          16 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASE------SARQDFQREAELLTVLQHQHIVR--FYGVCT--EGRPLLMV   85 (280)
T ss_pred             ccCCeEEEeEEecCCCCCCceEEEEEecCcCCH------HHHHHHHHHHHHHhcCCCCCCce--EEEEEe--cCCceEEE
Confidence            89999999963     23577899998765321      12336688999999999999974  343433  33457999


Q ss_pred             eeeeeCCCCCccCCCCCC------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccE
Q psy11822        128 MEVTRRSQYTGATAPPPP------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                      |||++++++..++....+            ...+++..+..++.|++.||+|||+.|++||||||+|||+    +.++.+
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~----~~~~~~  161 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV----GQGLVV  161 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE----cCCCCE
Confidence            999999987665443211            1246777788999999999999999999999999999999    777899


Q ss_pred             EEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||++.......    .....+++.|+|||++.+
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  198 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhcc
Confidence            999999998664321    123345678999998765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=2.4e-26  Score=182.19  Aligned_cols=161  Identities=15%  Similarity=0.140  Sum_probs=123.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.. .++..+|+|.++.....     .....+.+|+++++.+.||||+.  +++++.  .....++||||+
T Consensus         5 ~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~   74 (250)
T cd05085           5 KGNFGEVFKGTL-KDKTPVAVKTCKEDLPQ-----ELKIKFLSEARILKQYDHPNIVK--LIGVCT--QRQPIYIVMELV   74 (250)
T ss_pred             CCCCceEEEEEe-cCCcEEEEEecCCcCCH-----HHHHHHHHHHHHHHhCCCCCcCe--EEEEEe--cCCccEEEEECC
Confidence            489999999985 46889999987653211     11224678999999999999974  444433  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..+....  ...+++..+..++.|++.||.|||++|++||||||+||++    +.++.+||+|||++........
T Consensus        75 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~~~~  148 (250)
T cd05085          75 PGGDFLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSRQEDDGIY  148 (250)
T ss_pred             CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE----cCCCeEEECCCccceecccccc
Confidence            999976665432  1247778889999999999999999999999999999999    7778999999999976543311


Q ss_pred             ---cceeecccCCCCccccC
Q psy11822        212 ---NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ---~~~~gt~~y~aPE~l~~  228 (229)
                         ....+++.|+|||++.+
T Consensus       149 ~~~~~~~~~~~y~aPE~~~~  168 (250)
T cd05085         149 SSSGLKQIPIKWTAPEALNY  168 (250)
T ss_pred             ccCCCCCCcccccCHHHhcc
Confidence               12344567999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=1.9e-26  Score=187.76  Aligned_cols=163  Identities=23%  Similarity=0.221  Sum_probs=125.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc--------cccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN--------VKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~--------~~~~  124 (229)
                      |.||.||+|.+..+|+.||+|.++.....    ......+.+|+.+++.++|||++.  +++++....        ....
T Consensus        18 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~----~~~~~~~~~e~~~~~~l~h~~i~~--~~~~~~~~~~~~~~~~~~~~~   91 (302)
T cd07864          18 GTYGQVYKARDKDTGELVALKKVRLDNEK----EGFPITAIREIKILRQLNHRNIVN--LKEIVTDKQDALDFKKDKGAF   91 (302)
T ss_pred             cCCEEEEEEEECCCCcEEEEEEEeecccc----cCchHHHHHHHHHHHhCCCCCeee--eeheecCcchhhhccccCCcE
Confidence            88999999999989999999998653211    112234578999999999999984  444433221        2357


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      ++||||++++.+..+...   ...+++..++.++.|++.||+|||+.||+|+||||+||++    +.++.+||+|||++.
T Consensus        92 ~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili----~~~~~~kl~dfg~~~  164 (302)
T cd07864          92 YLVFEYMDHDLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL----NNKGQIKLADFGLAR  164 (302)
T ss_pred             EEEEcccCccHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCcEEeCcccccc
Confidence            899999998554444332   2358888899999999999999999999999999999999    788899999999998


Q ss_pred             ecCccc---ccceeecccCCCCccccC
Q psy11822        205 HVSKAV---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~~---~~~~~gt~~y~aPE~l~~  228 (229)
                      ......   .....++..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             cccCCcccccccceeccCccChHHhcC
Confidence            765432   123456788999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.92  E-value=1.8e-26  Score=186.03  Aligned_cols=164  Identities=12%  Similarity=0.090  Sum_probs=124.2

Q ss_pred             CCceeeeeeecCC----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLE----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..    ++..||+|.+....     .......+.+|+.+++.++|+|++.  ++++.... ....++++
T Consensus        17 g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~--~~~~~~~~-~~~~~~~~   88 (280)
T cd05043          17 GTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-----SEIQVTLLLQESCLLYGLSHQNILP--ILHVCIED-GEPPFVLY   88 (280)
T ss_pred             cCCceEEEEEEecCCCCceeEEEEEEccCCC-----CHHHHHHHHHHHHHHHhCCCCCCCe--EEEEEecC-CCCCEEEE
Confidence            9999999999865    36889999876421     1222345688999999999999984  33332221 24568999


Q ss_pred             eeeeCCCCCccCCCCCCC-----CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        129 EVTRRSQYTGATAPPPPA-----QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~-----~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +|++++++..++......     ..+++.+++.++.|++.||+|||+++++||||||+||++    +..+.+||+|||++
T Consensus        89 ~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~----~~~~~~kl~d~g~~  164 (280)
T cd05043          89 PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI----DEELQVKITDNALS  164 (280)
T ss_pred             EcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE----cCCCcEEECCCCCc
Confidence            999998876665432111     457888889999999999999999999999999999999    77789999999999


Q ss_pred             eecCccc----ccceeecccCCCCccccC
Q psy11822        204 SHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +.+....    .....++..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~  193 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVN  193 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhc
Confidence            8764321    122345677999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=5.4e-26  Score=179.96  Aligned_cols=163  Identities=25%  Similarity=0.318  Sum_probs=131.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.+|+|.+......   .....+.+.+|+.+++.++|+|++  .+++.+.  .....+++|||+
T Consensus         3 ~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~   75 (250)
T cd05123           3 KGSFGKVLLVRKKDTGKLYAMKVLKKKKII---KRKEVEHTLTERNILSRINHPFIV--KLHYAFQ--TEEKLYLVLEYA   75 (250)
T ss_pred             CCCceEEEEEEECCCCcEEEEEEeehhhhc---chHHHHHHHHHHHHHHHcCCCcHH--HHHHHee--cCCeeEEEEecC
Confidence            489999999999888999999998764322   122344678899999999999997  4444443  445679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++......   ...+++..+..++.|+++||.|||+.+++|+||+|+||++    +.++.++|+|||++......  
T Consensus        76 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~----~~~~~~~l~d~~~~~~~~~~~~  148 (250)
T cd05123          76 PGGELFSHLSK---EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL----DADGHIKLTDFGLAKELSSEGS  148 (250)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE----cCCCcEEEeecCcceecccCCC
Confidence            98887766554   2357888889999999999999999999999999999999    77789999999999876543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......++..|+|||++.+
T Consensus       149 ~~~~~~~~~~~~~Pe~~~~  167 (250)
T cd05123         149 RTNTFCGTPEYLAPEVLLG  167 (250)
T ss_pred             cccCCcCCccccChHHhCC
Confidence            3345678889999998754

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.92  E-value=9e-27  Score=186.08  Aligned_cols=162  Identities=22%  Similarity=0.296  Sum_probs=130.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.+|+|.+......     .....+.+|+++++.+.||||+  ..++.+.  .....++++||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~--~~~~~~lv~e~~   81 (265)
T cd06605          11 AGNSGVVSKVLHRPTGKIMAVKTIRLEINE-----AIQKQILRELDILHKCNSPYIV--GFYGAFY--NNGDISICMEYM   81 (265)
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEEecccCh-----HHHHHHHHHHHHHHHCCCCchh--hhheeee--cCCEEEEEEEec
Confidence            389999999999999999999988764221     2233567899999999999997  3443333  335679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++|..+.....  ..+++..+..++.|++.||.|||+ .+++|+||||+||++    +..+.++|+|||.+.......
T Consensus        82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~----~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV----NSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE----CCCCCEEEeecccchhhHHHH
Confidence            9999777765422  457788888999999999999999 999999999999999    777899999999987765443


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       156 ~~~~~~~~~y~~PE~~~~  173 (265)
T cd06605         156 AKTFVGTSSYMAPERIQG  173 (265)
T ss_pred             hhcccCChhccCHHHHcC
Confidence            334788899999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.92  E-value=2.6e-26  Score=186.12  Aligned_cols=164  Identities=16%  Similarity=0.193  Sum_probs=121.4

Q ss_pred             cCCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         52 LDDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .|+||.||+|++..     +...+|+|.+.....     ......+.+|+.+++.++||||+  ++++.+.  .....++
T Consensus        10 ~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~l   80 (290)
T cd05045          10 EGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-----SSELRDLLSEFNLLKQVNHPHVI--KLYGACS--QDGPLLL   80 (290)
T ss_pred             CcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-----HHHHHHHHHHHHHHhhCCCCCEe--eEEEEEe--cCCCcEE
Confidence            38999999998642     335799998764321     11234568899999999999997  4444433  3345789


Q ss_pred             eeeeeeCCCCCccCCCC---------------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeee
Q psy11822        127 MMEVTRRSQYTGATAPP---------------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIML  185 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~---------------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~  185 (229)
                      +|||+.++++..++...                     .....+++..+..++.|++.||.|||+++++||||||+||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            99999999876553321                     112346667778999999999999999999999999999999


Q ss_pred             eCCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        186 VDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       186 ~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                          +.++.+||+|||+++.....    ......++..|+|||++.+
T Consensus       161 ----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  203 (290)
T cd05045         161 ----AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD  203 (290)
T ss_pred             ----cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc
Confidence                77789999999999865332    1123355678999998754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.92  E-value=4.2e-26  Score=183.32  Aligned_cols=164  Identities=17%  Similarity=0.165  Sum_probs=125.5

Q ss_pred             cCCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         52 LDDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .|+||.||+|+...     +.+.+|+|.+.....     ....+.+.+|++++++++|+||+  .+++++.  .....++
T Consensus        15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~l   85 (275)
T cd05046          15 RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-----ENLQSEFRRELDMFRKLSHKNVV--RLLGLCR--EAEPHYM   85 (275)
T ss_pred             ccceeEEEEEEeccCCcCCCcceEEEEccCCccc-----hHHHHHHHHHHHHHHhcCCccee--eeEEEEC--CCCcceE
Confidence            39999999999653     356899998765311     11334678899999999999997  4444433  3345799


Q ss_pred             eeeeeeCCCCCccCCCCCCC------CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        127 MMEVTRRSQYTGATAPPPPA------QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~------~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ||||+++++|..++......      ..+++..+..++.|++.||+|||+++|+||||||+||++    +..+.++|+||
T Consensus        86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~~~  161 (275)
T cd05046          86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV----SSQREVKVSLL  161 (275)
T ss_pred             EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE----eCCCcEEEccc
Confidence            99999999987765542211      157888899999999999999999999999999999999    77779999999


Q ss_pred             CcceecCcc---cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      |++......   ......++..|+|||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  192 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQE  192 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhcc
Confidence            998755332   2234567788999998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.92  E-value=2.5e-26  Score=185.93  Aligned_cols=165  Identities=24%  Similarity=0.249  Sum_probs=130.4

Q ss_pred             ceeecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         46 KYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        46 ~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .+...+.|++|.||+|.+..+++.+|+|.++....      ...+.+.+|+.+++.++|||++.  .++++.  .....+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~e~~~l~~~~h~~vv~--~~~~~~--~~~~~~   92 (285)
T cd06648          23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ------QRRELLFNEVVIMRDYQHPNIVE--MYSSYL--VGDELW   92 (285)
T ss_pred             cceEeccCCCeEEEEEEECCCCCEEEEEEEeccch------hHHHHHHHHHHHHHHcCCCChhe--EEEEEE--cCCeEE
Confidence            34455559999999999988999999998754211      12234678999999999999974  444433  234579


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +++||++++++..+...    ..+++.++..++.|++.||+|||++|++||||+|+||++    +.++.++|+|||.+..
T Consensus        93 ~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~d~g~~~~  164 (285)
T cd06648          93 VVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL----TSDGRVKLSDFGFCAQ  164 (285)
T ss_pred             EEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE----cCCCcEEEcccccchh
Confidence            99999999998776554    357888889999999999999999999999999999999    7778999999998876


Q ss_pred             cCcc--cccceeecccCCCCccccC
Q psy11822        206 VSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      ....  ......|++.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~y~aPE~~~~  189 (285)
T cd06648         165 VSKEVPRRKSLVGTPYWMAPEVISR  189 (285)
T ss_pred             hccCCcccccccCCccccCHHHhcC
Confidence            5432  2234578899999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.92  E-value=3.1e-26  Score=189.40  Aligned_cols=163  Identities=17%  Similarity=0.166  Sum_probs=120.2

Q ss_pred             CCceeeeeeecCCC-------CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLEG-------GELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|.+...       +..||+|.++....     ....+.+.+|+.+++++ +||||+  .+++.+.  .....
T Consensus        23 G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv--~~~~~~~--~~~~~   93 (334)
T cd05100          23 GCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-----DKDLSDLVSEMEMMKMIGKHKNII--NLLGACT--QDGPL   93 (334)
T ss_pred             ccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-----HHHHHHHHHHHHHHHhhcCCCCee--eeeEEEc--cCCce
Confidence            88999999976432       23799998764211     12234668899999999 899997  4444433  33457


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      +++|||+++++|..++....             +...+++.++..++.|++.||.|||++|++||||||+||++    +.
T Consensus        94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill----~~  169 (334)
T cd05100          94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV----TE  169 (334)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE----cC
Confidence            99999999998766654321             12235556667799999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++......    .....++..|+|||++.+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            7899999999998764421    122334567999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.92  E-value=2.5e-26  Score=184.40  Aligned_cols=165  Identities=18%  Similarity=0.077  Sum_probs=121.0

Q ss_pred             ccCCceeeeeeecCCCCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         51 CLDDIGQVNVPTDLEGGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      +.|+||.||+|.+..++.  .+|+|.++....     ....+.+.+|+.+++++ .||||+  .+++++.  .....+++
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv--~~~~~~~--~~~~~~lv   74 (270)
T cd05047           4 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-----KDDHRDFAGELEVLCKLGHHPNII--NLLGACE--HRGYLYLA   74 (270)
T ss_pred             CCCCCceEEEEEEcCCCCeeEEEEEEccccCC-----HHHHHHHHHHHHHHHhhccCCCee--eEEEEEe--cCCCceEE
Confidence            348999999999887775  468888764210     11223567899999999 899997  4444443  33457999


Q ss_pred             eeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        128 MEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      |||++++++..++....             ....+++.+++.++.|++.||+|||++|++||||||+||++    +.++.
T Consensus        75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili----~~~~~  150 (270)
T cd05047          75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYV  150 (270)
T ss_pred             EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE----cCCCe
Confidence            99999998655543211             12246777888999999999999999999999999999999    77889


Q ss_pred             EEEeecCcceecCccc-ccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKAV-CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~~-~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||++....... ......+..|+|||++.+
T Consensus       151 ~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~  185 (270)
T cd05047         151 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  185 (270)
T ss_pred             EEECCCCCccccchhhhccCCCCccccCChHHHcc
Confidence            9999999986433211 112233567999998754

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.2e-26  Score=181.49  Aligned_cols=158  Identities=18%  Similarity=0.186  Sum_probs=125.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|...  |+.||+|.++....       ..+++.+|+.+++.++|+|++.  ++++...  ....++||||+
T Consensus        16 ~g~~g~v~~~~~~--~~~v~iK~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~~--~~~~~~v~e~~   82 (256)
T cd05039          16 KGEFGDVMLGDYR--GQKVAVKCLKDDST-------AAQAFLAEASVMTTLRHPNLVQ--LLGVVLQ--GNPLYIVTEYM   82 (256)
T ss_pred             cCCCceEEEEEec--CcEEEEEEeccchh-------HHHHHHHHHHHHHhcCCcceee--eEEEEcC--CCCeEEEEEec
Confidence            3999999999865  89999999876422       2346688999999999999974  4444332  34579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..+..... ...+++..+..++.|++.||.|||+++++|+||||+||++    +.++.++|+|||.++...... 
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili----~~~~~~~l~d~g~~~~~~~~~-  156 (256)
T cd05039          83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV----SEDLVAKVSDFGLAKEASQGQ-  156 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE----eCCCCEEEccccccccccccc-
Confidence            9999777655422 1257888899999999999999999999999999999999    778899999999998774332 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....++..|+|||++.+
T Consensus       157 ~~~~~~~~~~ape~~~~  173 (256)
T cd05039         157 DSGKLPVKWTAPEALRE  173 (256)
T ss_pred             ccCCCcccccCchhhcC
Confidence            23344567999998754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.92  E-value=3.2e-26  Score=182.07  Aligned_cols=163  Identities=17%  Similarity=0.213  Sum_probs=128.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||++++..+|+.||+|.+......    ......+.+|+.+++.++||||+  .+.+.+.  .....++||||+.
T Consensus        11 g~~g~~~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~--~~~~~~lv~e~~~   82 (256)
T cd08218          11 GSFGKAILVKSKEDGKQYVIKEINISKMS----PKEREESRKEVAVLSNMKHPNIV--QYQESFE--ENGNLYIVMDYCE   82 (256)
T ss_pred             CCceEEEEEEEcCCCCEEEEEEEEhHhCC----hHHHHHHHHHHHHHHhCCCCCee--eeEeeec--CCCeEEEEEecCC
Confidence            89999999999999999999987653221    11223568899999999999987  4454443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++........ ...+++.++..++.|++.||.|||+++++|+||+|+||++    +.++.++|+|||++.......  
T Consensus        83 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~----~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          83 GGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             CCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE----cCCCCEEEeeccceeecCcchhh
Confidence            998665544311 1246777889999999999999999999999999999999    777799999999998765432  


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~pe~~~~  175 (256)
T cd08218         158 ARTCIGTPYYLSPEICEN  175 (256)
T ss_pred             hhhccCCccccCHHHhCC
Confidence            234568889999999765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=2.7e-26  Score=189.76  Aligned_cols=165  Identities=22%  Similarity=0.235  Sum_probs=124.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHH--------HhhhhhhhhccccccccccCccccceehhhhhhcccccc
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLK--------RMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKA  123 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--------~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~  123 (229)
                      .|+||.||+|.+..+++.||+|++.........        .......+.+|+.+++.++|+||+  .+.+++.  ....
T Consensus        19 ~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~   94 (335)
T PTZ00024         19 EGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIM--GLVDVYV--EGDF   94 (335)
T ss_pred             CCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCccee--eeeEEEe--cCCc
Confidence            399999999999989999999987653221100        000112357899999999999997  4444443  3345


Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      .++||||+++ ++......   ...+++..+..++.|++.||.|||+.|++|+||+|+||++    +.++.++|+|||++
T Consensus        95 ~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill----~~~~~~kl~dfg~~  166 (335)
T PTZ00024         95 INLVMDIMAS-DLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI----NSKGICKIADFGLA  166 (335)
T ss_pred             EEEEEecccc-CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE----CCCCCEEECCccce
Confidence            7899999986 44333333   2357888889999999999999999999999999999999    77789999999999


Q ss_pred             eecCc----------------ccccceeecccCCCCccccC
Q psy11822        204 SHVSK----------------AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~----------------~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....                .......+++.|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  207 (335)
T PTZ00024        167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG  207 (335)
T ss_pred             eecccccccccccccccccccccccccccccCCCCChhccc
Confidence            87651                11123456888999998865

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=3.9e-26  Score=182.24  Aligned_cols=158  Identities=16%  Similarity=0.134  Sum_probs=121.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+ ..+|+|.+....       ...+.+.+|+++++.++|+|++.  ++++..   ....+++|||++
T Consensus        17 g~~~~v~~~~~~~~-~~~~lK~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~---~~~~~~v~e~~~   83 (260)
T cd05069          17 GCFGEVWMGTWNGT-TKVAIKTLKPGT-------MMPEAFLQEAQIMKKLRHDKLVP--LYAVVS---EEPIYIVTEFMG   83 (260)
T ss_pred             cCCCeEEEEEEcCC-ceEEEEEcccCC-------ccHHHHHHHHHHHHhCCCCCeee--EEEEEc---CCCcEEEEEcCC
Confidence            89999999987644 569999876531       12235678999999999999974  333332   234689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      ++++..++.... ...+++..+..++.|++.||.|||+.|++|+||||+||++    +.++.++|+|||++........ 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          84 KGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV----GDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE----cCCCeEEECCCccceEccCCccc
Confidence            998766654322 2346777788999999999999999999999999999999    7788999999999987644321 


Q ss_pred             --cceeecccCCCCccccC
Q psy11822        212 --NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 --~~~~gt~~y~aPE~l~~  228 (229)
                        ....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~  177 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             ccCCCccchhhCCHHHhcc
Confidence              23345678999998754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG1026|consensus

Probab=99.92  E-value=6.6e-27  Score=203.42  Aligned_cols=162  Identities=19%  Similarity=0.238  Sum_probs=128.9

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |.||+||+|+...     ....||||.++...     ..+++.+|+||++++..|+|||||  .+++.  |......++|
T Consensus       497 gaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-----~~~~~~dF~REaeLla~l~H~nIV--rLlGV--C~~~~P~~Mv  567 (774)
T KOG1026|consen  497 GAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-----ENQARQDFRREAELLAELQHPNIV--RLLGV--CREGDPLCMV  567 (774)
T ss_pred             chhhhhhhhhccCCCCCccceehhHhhhcccc-----cHHHHHHHHHHHHHHHhccCCCeE--EEEEE--EccCCeeEEE
Confidence            8999999998542     34579999988742     233566899999999999999998  45544  4466678999


Q ss_pred             eeeeeCCCCCccCCCCCC-----------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        128 MEVTRRSQYTGATAPPPP-----------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-----------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                      +|||..|+|.+++....+           ...|+..+.+.|+.|||.|+.||-++.+|||||...|+||    .++..||
T Consensus       568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV----ge~l~VK  643 (774)
T KOG1026|consen  568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV----GENLVVK  643 (774)
T ss_pred             EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee----ccceEEE
Confidence            999999998877554322           1226666778999999999999999999999999999999    8889999


Q ss_pred             EeecCcceecCccccc----ceeecccCCCCcccc
Q psy11822        197 VIDFGSASHVSKAVCN----TYLQSRYYRAPEIIL  227 (229)
Q Consensus       197 l~DFg~a~~~~~~~~~----~~~gt~~y~aPE~l~  227 (229)
                      |+|||+++..=+..+.    ...-..+|||||.++
T Consensus       644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl  678 (774)
T KOG1026|consen  644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL  678 (774)
T ss_pred             ecccccchhhhhhhhhcccCCceeeeecCCHHHhh
Confidence            9999999977544332    234456799999875

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.92  E-value=4.4e-26  Score=182.55  Aligned_cols=164  Identities=15%  Similarity=0.117  Sum_probs=124.5

Q ss_pred             cccCCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         50 NCLDDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .+.|+||.||+|++..++.   .+|+|.++.....     ...+.+.+|+++++.++|+|++  .+.+++.  .....++
T Consensus        13 lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~l   83 (268)
T cd05063          13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-----KQRQDFLSEASIMGQFSHHNII--RLEGVVT--KFKPAMI   83 (268)
T ss_pred             ecCCCCccEEEEEEecCCCCceEEEEEeccccCCH-----HHHHHHHHHHHHHhcCCCCCee--EEEEEEc--cCCCcEE
Confidence            3348999999999876554   7999988653211     1233567899999999999997  4444443  3345799


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||++++++..+....  ...+++.++..++.|++.||+|||+.|++||||||+||++    +.++.+||+|||++...
T Consensus        84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          84 ITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV----NSNLECKVSDFGLSRVL  157 (268)
T ss_pred             EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE----cCCCcEEECCCccceec
Confidence            99999999987665431  2357888889999999999999999999999999999999    77789999999999876


Q ss_pred             Cccccc-----ceeecccCCCCccccC
Q psy11822        207 SKAVCN-----TYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~~~-----~~~gt~~y~aPE~l~~  228 (229)
                      ......     ....++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (268)
T cd05063         158 EDDPEGTYTTSGGKIPIRWTAPEAIAY  184 (268)
T ss_pred             ccccccceeccCCCcCceecCHHHhhc
Confidence            442211     1122456999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=3.3e-26  Score=184.51  Aligned_cols=163  Identities=18%  Similarity=0.138  Sum_probs=126.6

Q ss_pred             CCceeeeeeecC----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDL----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++.    .+++.+|+|+++.....     .....+.+|+++++.+.|+||+.  .++++........+++|
T Consensus        15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~ei~~l~~l~~~~i~~--~~~~~~~~~~~~~~lv~   87 (284)
T cd05038          15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-----QHRSDFEREIEILRTLDHENIVK--YKGVCEKPGGRSLRLIM   87 (284)
T ss_pred             CCCeeEEEeeecCCCCCCceEEEEEEeccccch-----HHHHHHHHHHHHHHhCCCCChhe--EEeeeecCCCCceEEEE
Confidence            899999999864    34889999998764221     23446789999999999999974  44444333345678999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..++....  ..+++..+..++.|++.||.|||++|++|+||||+||++    +.++.++|+|||++.....
T Consensus        88 e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          88 EYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV----ESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEccccccccccc
Confidence            9999999777765422  248888889999999999999999999999999999999    7778999999999987753


Q ss_pred             ccc-----cceeecccCCCCccccC
Q psy11822        209 AVC-----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~-----~~~~gt~~y~aPE~l~~  228 (229)
                      ...     ....++..|+|||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~  186 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRT  186 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHcc
Confidence            211     12344556999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=3.8e-26  Score=183.22  Aligned_cols=163  Identities=13%  Similarity=0.103  Sum_probs=118.6

Q ss_pred             cCCceeeeeeecCC--CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLE--GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|....  ....+++|.+.....     ....+.+.+|+.+++.++||||+  ..++.+.  .....++|||
T Consensus         5 ~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~e~~~~~~l~h~~iv--~~~~~~~--~~~~~~lv~e   75 (268)
T cd05086           5 NGWFGKVLLSEIYTDTGVARVVVKELKANAS-----SKEQNEFLQQGDPYRILQHPNIL--QCLGQCV--EAIPYLLVFE   75 (268)
T ss_pred             CCcCceEEEEEEEcCCCcceEEEEEecCCCC-----hHHHHHHHHHHHHHhccCCcchh--heEEEec--CCCccEEEEe
Confidence            48999999997533  234567776554211     11234668888999999999997  3444433  3345799999


Q ss_pred             eeeCCCCCccCCCCCC-CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPP-AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |+++++|..++..... ...++...+..++.|++.||+|||+.+++||||||+|||+    +.++.++|+|||++.....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~----~~~~~~~l~Dfg~~~~~~~  151 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL----TSDLTVKVGDYGIGPSRYK  151 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE----cCCccEEecccccccccCc
Confidence            9999997766544211 1234444567889999999999999999999999999999    7788999999999865322


Q ss_pred             c----cccceeecccCCCCcccc
Q psy11822        209 A----VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~----~~~~~~gt~~y~aPE~l~  227 (229)
                      .    ......++..|+|||++.
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         152 EDYIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             chhhhcccCCcCcccccCchhcc
Confidence            1    123457888999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.92  E-value=2.4e-26  Score=186.79  Aligned_cols=162  Identities=25%  Similarity=0.251  Sum_probs=129.1

Q ss_pred             ecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         49 FNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      ..+.|+||.||+|.+..+++.||+|.+....      ......+.+|+.+++.++|+|++  ..++.+.  .....++||
T Consensus        27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~   96 (292)
T cd06657          27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRK------QQRRELLFNEVVIMRDYQHENVV--EMYNSYL--VGDELWVVM   96 (292)
T ss_pred             HcCCCCCeEEEEEEEcCCCeEEEEEEecccc------hhHHHHHHHHHHHHHhcCCcchh--heeeEEE--eCCEEEEEE
Confidence            3444999999999999999999999875321      12234568899999999999997  4444443  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..+...    ..+++..++.++.|++.||+|||+.|++|+||+|+||++    +.++.++|+|||++.....
T Consensus        97 e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv----~~~~~~~l~dfg~~~~~~~  168 (292)
T cd06657          97 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSK  168 (292)
T ss_pred             ecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCCEEEcccccceeccc
Confidence            99999998776543    357888889999999999999999999999999999999    7778999999999876644


Q ss_pred             c--cccceeecccCCCCccccC
Q psy11822        209 A--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      .  ......|++.|+|||++.+
T Consensus       169 ~~~~~~~~~~~~~y~~pE~~~~  190 (292)
T cd06657         169 EVPRRKSLVGTPYWMAPELISR  190 (292)
T ss_pred             ccccccccccCccccCHHHhcC
Confidence            2  2234678899999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.92  E-value=2.2e-26  Score=188.12  Aligned_cols=163  Identities=16%  Similarity=0.168  Sum_probs=121.3

Q ss_pred             CCceeeeeeecCC-------CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLE-------GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|.+..       ++..+|+|.++....     ......+.+|+.+++.+ +||||+  .+++++.  .....
T Consensus        29 G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~i~--~~~~~~~--~~~~~   99 (307)
T cd05098          29 GCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-----EKDLSDLISEMEMMKMIGKHKNII--NLLGACT--QDGPL   99 (307)
T ss_pred             CCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-----hHHHHHHHHHHHHHHHhcCCCCEe--eEEEEEe--cCCce
Confidence            8899999998642       235799999875311     11223567899999999 799997  4444443  33457


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      |+||||+++++|..++....             +...+++.+++.++.|++.||+|||++|++||||||+||++    +.
T Consensus       100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~  175 (307)
T cd05098         100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TE  175 (307)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE----cC
Confidence            99999999998766654321             12346777788999999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++......    .....+++.|+|||++.+
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  216 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhcc
Confidence            7899999999997664321    112234568999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.92  E-value=5.8e-26  Score=181.25  Aligned_cols=158  Identities=16%  Similarity=0.136  Sum_probs=121.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. .+..+|+|.+.....       ..+.+.+|+.+++.++|+||+.++  +....   ...+++|||++
T Consensus        17 g~~~~vy~~~~~-~~~~~~iK~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~--~~~~~---~~~~~v~e~~~   83 (260)
T cd05073          17 GQFGEVWMATYN-KHTKVAVKTMKPGSM-------SVEAFLAEANVMKTLQHDKLVKLH--AVVTK---EPIYIITEFMA   83 (260)
T ss_pred             ccceEEEEEEec-CCccEEEEecCCChh-------HHHHHHHHHHHHHhcCCCCcceEE--EEEcC---CCeEEEEEeCC
Confidence            899999999854 567799998765321       233568899999999999998543  33322   35689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..++.... ...+++..++.++.|++.||.|||+.|++|+||||+||++    +..+.+||+|||++.......  
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          84 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCCcceeeccCCCcc
Confidence            999766654422 2346667788899999999999999999999999999999    778899999999998765432  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~  177 (260)
T cd05073         159 AREGAKFPIKWTAPEAINF  177 (260)
T ss_pred             cccCCcccccccCHhHhcc
Confidence             122345567999998854

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=5.2e-26  Score=181.38  Aligned_cols=159  Identities=17%  Similarity=0.137  Sum_probs=124.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..+|+|.+.....       ..+.+.+|+.+++.++|+|++.  +++++.  .....++||||++
T Consensus        17 g~~~~v~~~~~~-~~~~~~vK~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~~v~e~~~   84 (261)
T cd05034          17 GQFGEVWMGTWN-GTTKVAVKTLKPGTM-------SPEAFLQEAQIMKKLRHDKLVQ--LYAVCS--EEEPIYIVTEYMS   84 (261)
T ss_pred             CcceEEEEEEEc-CCceEEEEEecCCcc-------CHHHHHHHHHHHhhCCCCCEee--eeeeee--cCCceEEEEeccC
Confidence            889999999975 568899998875321       2335688999999999999974  443433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      ++++..++.... ...+++..+..++.|++.||.|||+++++|+||||+||++    +.++.++|+|||++........ 
T Consensus        85 ~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          85 KGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV----GENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE----cCCCCEEECccccceeccchhhh
Confidence            999777665422 2357888889999999999999999999999999999999    7778999999999987754321 


Q ss_pred             --cceeecccCCCCccccC
Q psy11822        212 --NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 --~~~~gt~~y~aPE~l~~  228 (229)
                        ....++..|+|||.+.+
T Consensus       160 ~~~~~~~~~~y~~PE~~~~  178 (261)
T cd05034         160 AREGAKFPIKWTAPEAANY  178 (261)
T ss_pred             hhhccCCCccccCHHHhcc
Confidence              12334567999998865

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.92  E-value=2.2e-26  Score=183.78  Aligned_cols=164  Identities=22%  Similarity=0.209  Sum_probs=129.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..+|+|++......     ...+.+.+|+..++.++|+|++.  ++....  .....++|||++
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~iv~e~~   81 (267)
T cd06610          11 VGATAVVYAAICLPNNEKVAIKRIDLEKCQ-----TSVDELRKEVQAMSQCNHPNVVK--YYTSFV--VGDELWLVMPYL   81 (267)
T ss_pred             CCCCeEEEEEEEcCCCcEEEEEEeccCCcc-----hHHHHHHHHHHHHHhcCCCCEEE--EEEEEe--eCCEEEEEEecc
Confidence            388999999998889999999987643211     13346688999999999999974  333332  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +++++..++....+...+++..+..++.|++.||+|||+.|++||||+|+||++    +.++.++|+|||++..+.... 
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~----~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL----GEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE----cCCCCEEEcccchHHHhccCcc
Confidence            999977776543333457888889999999999999999999999999999999    777899999999987765431 


Q ss_pred             -----ccceeecccCCCCccccC
Q psy11822        211 -----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -----~~~~~gt~~y~aPE~l~~  228 (229)
                           .....|+..|+|||++..
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~  180 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQ  180 (267)
T ss_pred             ccccccccccCChhhcChHHHcc
Confidence                 134578899999998753

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=5.2e-26  Score=182.85  Aligned_cols=163  Identities=21%  Similarity=0.221  Sum_probs=130.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||+|.+..+++.||+|++.......   ....+.+.+|+.+++.+. |+||+  .+++.+.  .....++||||
T Consensus        11 ~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~~i~--~~~~~~~--~~~~~~lv~e~   83 (280)
T cd05581          11 EGSFSTVVLAKEKETNKEYAIKILDKRQLIK---EKKVKYVKIEKEVLTRLNGHPGII--KLYYTFQ--DEENLYFVLEY   83 (280)
T ss_pred             CCCceEEEEEEEcCCCCEEEEEEechHhccc---hHHHHHHHHHHHHHHhcccCCCch--hHHHHhc--CCceEEEEEcC
Confidence            3899999999999999999999987643221   122345678889999998 99997  4555544  33467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++++..++..   ...+++..+..++.|++.||.|||+.|++|+||+|+||++    +.++.++|+|||++.......
T Consensus        84 ~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i----~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          84 APNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL----DKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE----CCCCCEEecCCccccccCCcc
Confidence            999998777665   3368888999999999999999999999999999999999    777899999999988764321


Q ss_pred             ----------------------ccceeecccCCCCccccC
Q psy11822        211 ----------------------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ----------------------~~~~~gt~~y~aPE~l~~  228 (229)
                                            .....|+..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~  196 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE  196 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCC
Confidence                                  123467889999998754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.92  E-value=3.3e-26  Score=187.66  Aligned_cols=163  Identities=17%  Similarity=0.160  Sum_probs=120.2

Q ss_pred             CCceeeeeeecC-------CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDL-------EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++.       .....+|+|.++....     ......+.+|+.+++.+ .||||+  .+++++.  .....
T Consensus        23 G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv--~~~~~~~--~~~~~   93 (314)
T cd05099          23 GCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-----DKDLADLISEMELMKLIGKHKNII--NLLGVCT--QEGPL   93 (314)
T ss_pred             CCcccEEEeeecccCCccCCcceEEEEEecCCCCC-----hHHHHHHHHHHHHHHhccCCCCee--eEEEEEc--cCCce
Confidence            899999999753       2345799998764211     11233567899999988 699997  4444433  33457


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      +++|||+++++|..++....             ....+++.++..++.|++.||.|||++|++||||||+||++    +.
T Consensus        94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill----~~  169 (314)
T cd05099          94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV----TE  169 (314)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE----cC
Confidence            99999999999766654321             12346667778899999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++......    .....+++.|+|||++.+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD  210 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHHHcc
Confidence            7899999999998764321    122234467999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.92  E-value=3.8e-26  Score=185.73  Aligned_cols=163  Identities=15%  Similarity=0.143  Sum_probs=120.5

Q ss_pred             CCceeeeeeecCC----------------CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLE----------------GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |+||.||+|.+..                ++..+|+|.+.....     ......+.+|+.+++.++|+||+.  +++++
T Consensus        16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~--~~~~~   88 (296)
T cd05095          16 GQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-----KNARNDFLKEIKIMSRLKDPNIIR--LLAVC   88 (296)
T ss_pred             CCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCCcce--EEEEE
Confidence            9999999986432                345799998875311     122346688999999999999974  44444


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCC--------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPP--------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP  188 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~--------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~  188 (229)
                      .  .....+++|||++++++..++....        ....+++.++..++.|++.||+|||++|++||||||+||++   
T Consensus        89 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili---  163 (296)
T cd05095          89 I--TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV---  163 (296)
T ss_pred             e--cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE---
Confidence            3  3345799999999998766544321        11235556788999999999999999999999999999999   


Q ss_pred             CCCCccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        189 VRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       189 ~~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                       +.++.++|+|||+++.+....    .....+++.|+|||+..+
T Consensus       164 -~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  206 (296)
T cd05095         164 -GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL  206 (296)
T ss_pred             -cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc
Confidence             777899999999998764432    122344578999997643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0576|consensus

Probab=99.92  E-value=1.2e-26  Score=196.95  Aligned_cols=157  Identities=23%  Similarity=0.266  Sum_probs=132.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++..|+|+++.+..+      ...-++.||-+++..+||||+-  .+  ........+|+.||||.
T Consensus        26 gTygdvyKaRd~~s~elaavkvVkLep~d------d~~~iqqei~~~~dc~h~niva--y~--gsylr~dklwicMEycg   95 (829)
T KOG0576|consen   26 GTYGDVYKARDKRSGELAAVKVVKLEPGD------DFSGIQQEIGMLRDCRHPNIVA--YF--GSYLRRDKLWICMEYCG   95 (829)
T ss_pred             CcccchhhhcccccCchhhheeeeccCCc------cccccccceeeeecCCCcChHH--HH--hhhhhhcCcEEEEEecC
Confidence            89999999999999999999999875322      3335588999999999999962  11  22223456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+++.+-..   .+.+++.++....+..+.||+|||+.|-+|||||=.||++    +..+.+|++|||.+-.+...  .
T Consensus        96 ggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill----td~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   96 GGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL----TDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             CCcccceeee---cccchhHHHHHHHhhhhccchhhhcCCcccccccccceee----cccCceeecccCchhhhhhhhhh
Confidence            9999888776   4568999999999999999999999999999999999999    88889999999998777543  4


Q ss_pred             ccceeecccCCCCccc
Q psy11822        211 CNTYLQSRYYRAPEII  226 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l  226 (229)
                      .....||+.|||||+-
T Consensus       169 rksfiGtpywmapEva  184 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVA  184 (829)
T ss_pred             hhcccCCccccchhHH
Confidence            4678999999999984

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.92  E-value=3.8e-26  Score=187.12  Aligned_cols=163  Identities=15%  Similarity=0.136  Sum_probs=126.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |++|.||.+++..+++.||+|++......    ....+.+.+|+.+++.++|+||+.  +++.+.  .....+++|||++
T Consensus        11 ~~~~~v~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~--~~~~~~--~~~~~~~~~e~~~   82 (314)
T cd08216          11 EDLMIVHLAKHKPTNTLVAVKKINLDSCS----KEDLKLLQQEIITSRQLQHPNILP--YVTSFI--VDSELYVVSPLMA   82 (314)
T ss_pred             cCCceEEEEEecCCCCEEEEEEEeccccc----hhHHHHHHHHHHHHHhcCCcchhh--hhheee--cCCeEEEEEeccC
Confidence            67777888887789999999998653111    223456789999999999999974  444433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..++..... ..+++..++.++.|++.||.|||+++|+||||||+||++    +.++.+||+|||.+..+...   
T Consensus        83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili----~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          83 YGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL----SGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             CCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE----ecCCceEEecCccceeecccccc
Confidence            9997776554222 247788888999999999999999999999999999999    77789999999998765321   


Q ss_pred             ------cccceeecccCCCCccccC
Q psy11822        210 ------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ------~~~~~~gt~~y~aPE~l~~  228 (229)
                            ......++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~  182 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVLQQ  182 (314)
T ss_pred             ccccccccccccccccccCHHHhcC
Confidence                  1233467778999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=1.9e-26  Score=190.25  Aligned_cols=163  Identities=13%  Similarity=0.095  Sum_probs=123.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||+|++......    ....+.+.+|+.+++.++||||+.  .++++..  ....++||||+.
T Consensus        11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~~~~l~h~niv~--~~~~~~~--~~~~~~v~e~~~   82 (328)
T cd08226          11 CNLTSVYLARHTPTGTLVTVRITDLENCT----EEHLKALQNEVVLSHFFRHPNIMT--SWTVFTT--GSWLWVISPFMA   82 (328)
T ss_pred             cCceeEEEEEEcCCCcEEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCcce--EeeeEec--CCceEEEEeccc
Confidence            68999999999999999999997653211    112346788999999999999974  4444433  345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..++..... ..+++..+..++.|++.||+|||++|++||||||+||++    +..+.++++||+.+......  .
T Consensus        83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill----~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI----SGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----eCCCcEEEechHHHhhhhccCcc
Confidence            9997666554222 247777888999999999999999999999999999999    77779999999865433211  0


Q ss_pred             -------ccceeecccCCCCccccC
Q psy11822        211 -------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -------~~~~~gt~~y~aPE~l~~  228 (229)
                             .....++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~  182 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQ  182 (328)
T ss_pred             ccccccccccccCccCccChhhhcC
Confidence                   011234567999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=3.9e-26  Score=183.03  Aligned_cols=162  Identities=15%  Similarity=0.160  Sum_probs=123.9

Q ss_pred             cCCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+++   .||+|.++....     ......+.+|+.+++.+.||||+.  +.+++.  +....++||
T Consensus        14 ~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~--~~~~~~--~~~~~~lv~   84 (269)
T cd05065          14 AGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT-----EKQRRDFLSEASIMGQFDHPNIIH--LEGVVT--KSRPVMIIT   84 (269)
T ss_pred             CCCCCeEEEEEEecCCCCceeEEEEEcCCCCC-----HHHHHHHHHHHHHHHhCCCcCcce--EEEEEC--CCCceEEEE
Confidence            39999999999876665   699999865311     112346788999999999999974  444433  334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..+....  ...+++.+++.++.|++.||+|||++|++|+||||+||++    +.++.+||+|||++.....
T Consensus        85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili----~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE----cCCCcEEECCCcccccccc
Confidence            999999987665542  2347888889999999999999999999999999999999    7788999999999876543


Q ss_pred             cc----cccee---ecccCCCCccccC
Q psy11822        209 AV----CNTYL---QSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~----~~~~~---gt~~y~aPE~l~~  228 (229)
                      ..    .....   .+..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAY  185 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhcc
Confidence            21    11111   2347999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.92  E-value=3.7e-26  Score=186.54  Aligned_cols=161  Identities=16%  Similarity=0.114  Sum_probs=121.8

Q ss_pred             cCCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.+..+|.    .+|+|.+.....     ......+.+|+.+++.+.||||+.  .++++..   ...+++
T Consensus        17 ~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~~~~l~h~niv~--~~~~~~~---~~~~~v   86 (303)
T cd05110          17 SGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-----PKANVEFMDEALIMASMDHPHLVR--LLGVCLS---PTIQLV   86 (303)
T ss_pred             cCCCccEEEEEEecCCCcceeeEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCCccc--EEEEEcC---CCceee
Confidence            39999999999877776    579998765321     111224678899999999999974  3443322   235789


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +||+++|++.......  ...+++..+..++.|++.||.|||+++|+||||||+||++    +.++.+||+|||+++...
T Consensus        87 ~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill----~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          87 TQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV----KSPNHVKITDFGLARLLE  160 (303)
T ss_pred             ehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee----cCCCceEEcccccccccc
Confidence            9999999866654432  2247777889999999999999999999999999999999    667799999999998765


Q ss_pred             ccc----ccceeecccCCCCccccC
Q psy11822        208 KAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ...    .....++..|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~  185 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHY  185 (303)
T ss_pred             CcccccccCCCccccccCCHHHhcc
Confidence            321    123445678999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.8e-26  Score=180.47  Aligned_cols=162  Identities=22%  Similarity=0.267  Sum_probs=131.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.+|.||+|++..+++.||+|.+......    ....+.+.+|+++++.++|+|++.  ++++..  +....+++|||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~~v~e~~   81 (254)
T cd06627          10 RGAFGVVYKGLNLETGDFVAIKQISLEKIK----EEALKSIMQEIDLLKNLKHPNIVK--YIGSIE--TSDSLYIILEYA   81 (254)
T ss_pred             ccCCeEEEEEEEcCCCcEEEEEEecccccC----HHHHHHHHHHHHHHHhCCCCCccE--EEEEEE--eCCEEEEEEecC
Confidence            389999999999889999999998764321    123456789999999999999873  443333  335678999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..+...   ...+++..+..++.|++.||.|||++|++||||+|+||++    +..+.++|+|||.+........
T Consensus        82 ~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          82 ENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT----TKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE----CCCCCEEEeccccceecCCCcc
Confidence            99998776655   2468888889999999999999999999999999999999    6678999999999987755422


Q ss_pred             --cceeecccCCCCccccC
Q psy11822        212 --NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 --~~~~gt~~y~aPE~l~~  228 (229)
                        ....++..|+|||.+.+
T Consensus       155 ~~~~~~~~~~y~~pe~~~~  173 (254)
T cd06627         155 DDASVVGTPYWMAPEVIEM  173 (254)
T ss_pred             cccccccchhhcCHhhhcC
Confidence              34678889999998754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=4.6e-26  Score=183.53  Aligned_cols=167  Identities=16%  Similarity=0.095  Sum_probs=122.7

Q ss_pred             cCCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccce
Q psy11822         52 LDDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .|+||.||+|.+..     ++..||+|.++....     ......+.+|+.+++.++|+||+.  +++++.  +....++
T Consensus        16 ~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~l   86 (277)
T cd05036          16 HGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-----EQDESDFLMEALIMSKFNHQNIVR--LIGVSF--ERLPRFI   86 (277)
T ss_pred             CCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-----HHHHHHHHHHHHHHHhCCCCCEee--EEEEEc--cCCCcEE
Confidence            38999999999876     778999998764211     112235688999999999999974  444333  2345689


Q ss_pred             eeeeeeCCCCCccCCCCCC----CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        127 MMEVTRRSQYTGATAPPPP----AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~----~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ||||++++++..++.....    ...+++..+..++.||+.||.|||+++++||||||+||++... .....+||+|||+
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~-~~~~~~kl~dfg~  165 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCK-GPGRVAKIADFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEecc-CCCcceEeccCcc
Confidence            9999999997766543211    1247777788899999999999999999999999999999433 2234799999999


Q ss_pred             ceecCcccc----cceeecccCCCCccccC
Q psy11822        203 ASHVSKAVC----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~~~----~~~~gt~~y~aPE~l~~  228 (229)
                      ++.......    .....+..|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLD  195 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhc
Confidence            987643221    12233567999998754

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=6.7e-26  Score=188.08  Aligned_cols=159  Identities=27%  Similarity=0.395  Sum_probs=122.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|.++.....    ......+.+|+.+++.++||||+  .+.+++...    .....++|+
T Consensus        26 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv--~~~~~~~~~~~~~~~~~~~lv~   99 (342)
T cd07879          26 GAYGSVCSAIDKRTGEKVAIKKLSRPFQS----EIFAKRAYRELTLLKHMQHENVI--GLLDVFTSAVSGDEFQDFYLVM   99 (342)
T ss_pred             cCCeEEEEEEeCCCCcEEEEEEecCcccc----ccchhHHHHHHHHHHhcCCCCcc--chhheecccccCCCCceEEEEe
Confidence            89999999999889999999988653211    11223467899999999999997  444444322    123458999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.. ++..+..     ..+++..+..++.|++.||+|||+.+++||||||+||++    +.++.+||+|||+++....
T Consensus       100 e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll----~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879         100 PYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV----NEDCELKILDFGLARHADA  169 (342)
T ss_pred             ccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEeeCCCCcCCCC
Confidence            99875 3333322     247788888999999999999999999999999999999    7788999999999986543


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....+++.|+|||++.+
T Consensus       170 ~-~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         170 E-MTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             C-CCCceeeecccChhhhcC
Confidence            2 245678899999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=6.4e-26  Score=180.06  Aligned_cols=164  Identities=20%  Similarity=0.209  Sum_probs=130.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||++.+..+++.+|+|.+.......    .....+.+|+++++.++|+||+  .+.+.+..  ....++||||++
T Consensus        11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~--~~~~~~v~e~~~   82 (256)
T cd08530          11 GSYGSVYKVKRLSDNQFYALKEVDLGSMSQ----KEREDAVNEIRILASVNHPNII--SYKEAFLD--GNKLCIVMEYAP   82 (256)
T ss_pred             CCceeEEEEEECCCCCEEEEEEEehhhccH----HHHHHHHHHHHHHHhCCCCCch--hhhhhhcc--CCEEEEEehhcC
Confidence            889999999999899999999987643322    1233557789999999999997  44545443  356799999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++++....... .....+++..+..++.|++.||+|||+.|++|+||+|+||++    +..+.+||+|||++........
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~----~~~~~~kl~d~g~~~~~~~~~~  158 (256)
T cd08530          83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILL----VANDLVKIGDLGISKVLKKNMA  158 (256)
T ss_pred             CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE----ecCCcEEEeeccchhhhccCCc
Confidence            99876654331 112357777888999999999999999999999999999999    6677999999999988766544


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....+++.|+|||.+.+
T Consensus       159 ~~~~~~~~~~~Pe~~~~  175 (256)
T cd08530         159 KTQIGTPHYMAPEVWKG  175 (256)
T ss_pred             ccccCCccccCHHHHCC
Confidence            45678899999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.92  E-value=5.2e-27  Score=187.49  Aligned_cols=163  Identities=20%  Similarity=0.199  Sum_probs=123.5

Q ss_pred             cCCceeeeeeecC----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDL----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|.||.||+|++.    ..+..|+||.++....     ....+.+.+|++.+++++||||+.  +++++.  .....++|
T Consensus         9 ~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~--~~g~~~--~~~~~~lv   79 (259)
T PF07714_consen    9 EGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS-----EEEEEEFLNEIQILRKLRHPNIVK--LYGFCI--ENEPLFLV   79 (259)
T ss_dssp             EESSEEEEEEEEESTTTSSEEEEEEEEESTTSS-----HHHHHHHHHHHHHHHTHSBTTBE---EEEEEE--SSSSEEEE
T ss_pred             cCCCcEEEEEEEEcccCCCCEEEEEEEeccccc-----cccceeeeeccccccccccccccc--cccccc--cccccccc
Confidence            3999999999887    4577899999854211     112456788999999999999984  444444  33447899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++|+|...+... ....+++.+...++.|++.||.|||+++++|+||+++||++    +.++.+||+|||++....
T Consensus        80 ~e~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill----~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL----DSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             EE--TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----ETTTEEEEESTTTGEETT
T ss_pred             cccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccc
Confidence            9999999977665553 12358888899999999999999999999999999999999    778899999999998873


Q ss_pred             cc----cccceeecccCCCCccccC
Q psy11822        208 KA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..    ......+...|+|||++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~aPE~~~~  179 (259)
T PF07714_consen  155 EKSKYKNDSSQQLPLRYLAPEVLKD  179 (259)
T ss_dssp             TSSSEEESTTSESGGGGS-HHHHHH
T ss_pred             ccccccccccccccccccccccccc
Confidence            22    1234566778999998753

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=4.5e-26  Score=187.17  Aligned_cols=159  Identities=25%  Similarity=0.293  Sum_probs=123.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|.+......   .......+.+|+.+++.++|||++  ...+++.  .....++||||+.
T Consensus        36 G~~~~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  108 (317)
T cd06635          36 GSFGAVYFARDVRTNEVVAIKKMSYSGKQ---SNEKWQDIIKEVKFLQRIKHPNSI--EYKGCYL--REHTAWLVMEYCL  108 (317)
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEecCCCC---chHHHHHHHHHHHHHHhCCCCCEE--EEEEEEe--eCCeEEEEEeCCC
Confidence            89999999999889999999987642111   112233567899999999999997  4444433  3345789999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +..++.+...   ...+++.++..++.|++.||.|||+.+++||||+|+||++    +.++.++|+|||++......  .
T Consensus       109 g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~----~~~~~~kl~dfg~~~~~~~~--~  179 (317)
T cd06635         109 GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASIASPA--N  179 (317)
T ss_pred             CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE----CCCCCEEEecCCCccccCCc--c
Confidence            6544333222   2357888889999999999999999999999999999999    77789999999998765433  3


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      ...|++.|+|||++.
T Consensus       180 ~~~~~~~y~aPE~~~  194 (317)
T cd06635         180 SFVGTPYWMAPEVIL  194 (317)
T ss_pred             cccCCccccChhhhh
Confidence            457888999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.92  E-value=7.3e-26  Score=182.68  Aligned_cols=163  Identities=26%  Similarity=0.318  Sum_probs=125.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.+|.||+|.+..+|..||+|++......    ......+.+|+..++.++|||++  .+++++.  +....+++|||+
T Consensus         9 ~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~E~~~l~~l~~~~iv--~~~~~~~--~~~~~~iv~e~~   80 (283)
T cd07835           9 EGTYGVVYKARDKLTGEIVALKKIRLETED----EGVPSTAIREISLLKELNHPNIV--RLLDVVH--SENKLYLVFEFL   80 (283)
T ss_pred             CCCCeEEEEEEEcCCCCEEEEEEeeccccc----ccchhHHHHHHHHHHhcCCCCcc--CHhheec--cCCeEEEEEecc
Confidence            388999999999989999999988653211    11223457899999999999997  4555543  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++ ++..+...... ..+++..+..++.|++.||.|||+++++||||+|+||++    +.++.++|+|||++......  
T Consensus        81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~----~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          81 DL-DLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI----DREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             Cc-CHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCcEEEeecccccccCCCcc
Confidence            64 54444333221 357888899999999999999999999999999999999    77789999999999766432  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+++.|+|||++.+
T Consensus       155 ~~~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLG  173 (283)
T ss_pred             ccCccccccCCCCCceeec
Confidence            2234467889999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=6.5e-26  Score=180.89  Aligned_cols=158  Identities=16%  Similarity=0.157  Sum_probs=123.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.. .+++.||+|.+....       ...+.+.+|+.+++.++|+|++..  .++.   .....+++|||+.
T Consensus        17 G~~g~v~~~~~-~~~~~~a~K~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~~~--~~~~---~~~~~~~v~e~~~   83 (260)
T cd05067          17 GQFGEVWMGYY-NGHTKVAIKSLKQGS-------MSPEAFLAEANLMKQLQHPRLVRL--YAVV---TQEPIYIITEYME   83 (260)
T ss_pred             CccceEEeeec-CCCceEEEEEecCCC-------CcHHHHHHHHHHHHhcCCcCeeeE--EEEE---ccCCcEEEEEcCC
Confidence            99999999986 467889999876532       123456889999999999999743  3333   2235799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..+..... ...+++.++..++.|++.||+|||+.|++||||||+||++    +.++.++|+|||++.......  
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i----~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV----SETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE----cCCCCEEEccCcceeecCCCCcc
Confidence            999766544322 2357778889999999999999999999999999999999    777899999999998775322  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~y~~pe~~~~  177 (260)
T cd05067         159 AREGAKFPIKWTAPEAINY  177 (260)
T ss_pred             cccCCcccccccCHHHhcc
Confidence             123455678999998753

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.92  E-value=5.4e-26  Score=182.40  Aligned_cols=153  Identities=20%  Similarity=0.257  Sum_probs=119.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|.||.||++.+..++..+|+|.+.......           .|+.....+ +|||++  .+++.+..  ....++||||
T Consensus        26 ~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----------~e~~~~~~~~~h~~iv--~~~~~~~~--~~~~~iv~e~   90 (267)
T PHA03390         26 DGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----------IEPMVHQLMKDNPNFI--KLYYSVTT--LKGHVLIMDY   90 (267)
T ss_pred             CCCceEEEEEEEcCCCcEEEEEEEehhhcch-----------hhHHHHHHhhcCCCEE--EEEEEEec--CCeeEEEEEc
Confidence            4899999999999999999999987632110           111111112 699997  44444432  3467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~~~~  209 (229)
                      +++++|..++..   ...+++.+++.++.|+++||.|||+.|++||||||+||++    +..+ .++|+|||++......
T Consensus        91 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~----~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         91 IKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY----DRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----eCCCCeEEEecCccceecCCC
Confidence            999998777655   2368899999999999999999999999999999999999    6556 8999999999876543


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                        ....|+..|+|||++.+
T Consensus       164 --~~~~~~~~y~aPE~~~~  180 (267)
T PHA03390        164 --SCYDGTLDYFSPEKIKG  180 (267)
T ss_pred             --ccCCCCCcccChhhhcC
Confidence              34578899999999865

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.92  E-value=7.2e-26  Score=180.65  Aligned_cols=164  Identities=18%  Similarity=0.114  Sum_probs=120.2

Q ss_pred             ccCCceeeeeeecCC---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         51 CLDDIGQVNVPTDLE---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      +.|+||.||+|.+..   .+..+|+|.+....     .....+.+.+|+.+++.++|||++.  .+++... .....+++
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~-~~~~~~lv   75 (262)
T cd05058           4 GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-----DLEEVEQFLKEGIIMKDFSHPNVLS--LLGICLP-SEGSPLVV   75 (262)
T ss_pred             cccCCceEEEEEEecCCCceEEEEEEecCccC-----CHHHHHHHHHHHHHHccCCCCCcce--EEEEeec-CCCCcEEE
Confidence            348999999998643   35689999875321     1122345678899999999999974  3333221 22346899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+.++++..++....  ..+++..+..++.|++.||.|||+.+++||||||+|||+    +..+.+||+|||+++...
T Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili----~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          76 LPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML----DESFTVKVADFGLARDIY  149 (262)
T ss_pred             EecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE----cCCCcEEECCcccccccc
Confidence            99999999877755422  224555667889999999999999999999999999999    777899999999997653


Q ss_pred             cc------cccceeecccCCCCccccC
Q psy11822        208 KA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..      ......+++.|+|||.+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (262)
T cd05058         150 DKEYYSVHNHTGAKLPVKWMALESLQT  176 (262)
T ss_pred             CCcceeecccccCcCCccccChhHhcc
Confidence            32      1123455678999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.92  E-value=7.5e-26  Score=180.45  Aligned_cols=161  Identities=20%  Similarity=0.238  Sum_probs=131.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|++|.||+|++..+++.||+|.+......     .....+.+|+..++.++|+|++.  +.+++.  .....++||||+
T Consensus        11 ~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~   81 (264)
T cd06623          11 QGSSGVVYKVRHKPTGKIYALKKIHVDGDE-----EFRKQLLRELKTLRSCESPYVVK--CYGAFY--KEGEISIVLEYM   81 (264)
T ss_pred             ecCCeEEEEEEEcCCCcEEEEEEeccCcch-----HHHHHHHHHHHHHHhcCCCCeee--EEEEEc--cCCeEEEEEEec
Confidence            388999999999999999999987764221     22346688999999999999974  444433  335679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++++..++..   ...+++..+..++.|++.||.|||+ .+++|+||+|+||++    +.++.++|+|||.+.......
T Consensus        82 ~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~----~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          82 DGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI----NSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE----CCCCCEEEccCccceecccCC
Confidence            99998777654   2468888899999999999999999 999999999999999    778899999999998775432


Q ss_pred             --ccceeecccCCCCccccC
Q psy11822        211 --CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 --~~~~~gt~~y~aPE~l~~  228 (229)
                        .....++..|+|||.+.+
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~  174 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQG  174 (264)
T ss_pred             CcccceeecccccCHhhhCC
Confidence              235678899999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.92  E-value=6.8e-26  Score=180.17  Aligned_cols=156  Identities=20%  Similarity=0.177  Sum_probs=120.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||++..  +++.||+|.++...        ..+.+.+|+.+++.++|||++.  +.+++..   ...+++|||+
T Consensus        16 ~g~~g~v~~~~~--~~~~~~iK~~~~~~--------~~~~~~~e~~~l~~~~~~~i~~--~~~~~~~---~~~~~v~e~~   80 (254)
T cd05083          16 EGEFGAVLQGEY--TGQKVAVKNIKCDV--------TAQAFLEETAVMTKLHHKNLVR--LLGVILH---NGLYIVMELM   80 (254)
T ss_pred             cCCCCceEeccc--CCCceEEEeecCcc--------hHHHHHHHHHHHHhCCCCCcCe--EEEEEcC---CCcEEEEECC
Confidence            389999999974  58899999876531        1235678999999999999974  3333322   2368999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++.... ...+++..+..++.|++.||.|||+.|++||||||+||++    +.++.++|+|||++....... 
T Consensus        81 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili----~~~~~~kl~Dfg~~~~~~~~~-  154 (254)
T cd05083          81 SKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV----SEDGVAKVSDFGLARVGSMGV-  154 (254)
T ss_pred             CCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE----cCCCcEEECCCccceeccccC-
Confidence            9999776655422 2347777788999999999999999999999999999999    777899999999997654322 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      .....+..|+|||++.+
T Consensus       155 ~~~~~~~~y~~pe~~~~  171 (254)
T cd05083         155 DNSKLPVKWTAPEALKH  171 (254)
T ss_pred             CCCCCCceecCHHHhcc
Confidence            22344567999998754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=6.9e-26  Score=179.68  Aligned_cols=161  Identities=15%  Similarity=0.107  Sum_probs=124.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+.. ++.||+|.+......     .....+.+|+++++.+.|+||+.  +++++.  +....++||||+
T Consensus         5 ~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~~v~e~~   74 (251)
T cd05041           5 KGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-----DLKRKFLQEAEILKQYDHPNIVK--LIGVCV--QKQPIYIVMELV   74 (251)
T ss_pred             cCCCceEEEEEEeC-CCcEEEEeccccCCH-----HHHHHHHHHHHHHHhCCCCCeEE--EEEEEe--cCCCeEEEEEcC
Confidence            48999999999877 999999987653221     12345688999999999999973  444433  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..++...  ...+++..+..++.|++.||.|||+++++||||+|+||++    +.++.++|+|||++........
T Consensus        75 ~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili----~~~~~~~l~d~g~~~~~~~~~~  148 (251)
T cd05041          75 PGGSLLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV----GENNVLKISDFGMSREEEGGIY  148 (251)
T ss_pred             CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE----cCCCcEEEeeccccccccCCcc
Confidence            999976665432  2246777788999999999999999999999999999999    7778999999999986653211


Q ss_pred             ----cceeecccCCCCccccC
Q psy11822        212 ----NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ----~~~~gt~~y~aPE~l~~  228 (229)
                          ....++..|+|||++.+
T Consensus       149 ~~~~~~~~~~~~y~~PE~~~~  169 (251)
T cd05041         149 TVSDGLKQIPIKWTAPEALNY  169 (251)
T ss_pred             eeccccCcceeccCChHhhcc
Confidence                12233567999998764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.92  E-value=9.5e-26  Score=178.84  Aligned_cols=165  Identities=23%  Similarity=0.264  Sum_probs=133.3

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      ..|++|.||+|.+..++..|++|++......    ....+.+.+|+..+++++|+||+.  .++..........+++|||
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~--~~~~~~~~~~~~~~lv~e~   82 (260)
T cd06606           9 GRGSFGSVYLALDKDTGELMAVKSVELSGDS----EEELEALEREIRILSSLQHPNIVR--YYGSERDEEKNTLNIFLEY   82 (260)
T ss_pred             eecCceEEEEEEECCCCcEEEEEEeeccccc----hHHHHHHHHHHHHHHHcCCCCEee--EEEEEecCCCCeEEEEEEe
Confidence            3489999999999989999999998764321    223456789999999999999974  3333332222457899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      ++++++..+....   ..+++..+..++.|++.||.|||+.+++|+||+|+||++    +.++.++|+|||.+.......
T Consensus        83 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          83 VSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV----DSDGVVKLADFGCAKRLGDIE  155 (260)
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE----cCCCCEEEcccccEEeccccc
Confidence            9999987776652   268888899999999999999999999999999999999    777899999999998876542


Q ss_pred             ----ccceeecccCCCCccccC
Q psy11822        211 ----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ----~~~~~gt~~y~aPE~l~~  228 (229)
                          .....++..|+|||.+.+
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~  177 (260)
T cd06606         156 TGEGTGSVRGTPYWMAPEVIRG  177 (260)
T ss_pred             ccccccCCCCCccccCHhhhcC
Confidence                345678889999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.92  E-value=5.4e-26  Score=180.55  Aligned_cols=163  Identities=18%  Similarity=0.158  Sum_probs=127.2

Q ss_pred             cCCceeeeeeecCCCC----cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGG----ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|.+..++    ..||+|.++.....     ...+.+.+|+..++.++|+|++  .+++.+.  +....+++
T Consensus         9 ~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~--~~~~~~~i   79 (258)
T smart00219        9 EGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE-----QQIEEFLREARIMRKLDHPNIV--KLLGVCT--EEEPLMIV   79 (258)
T ss_pred             cCCCcceEEEEecCCCCCCCceEEEEEccCCCCh-----HHHHHHHHHHHHHHhcCCCchh--eEEEEEc--CCCeeEEE
Confidence            4999999999988766    89999998654211     1344678899999999999997  4444443  33467999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++++++..+...... ..+++..+..++.|++.||.|||+.+++|+||||+||++    +.++.++|+|||++....
T Consensus        80 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV----GENLVVKISDFGLSRDLY  154 (258)
T ss_pred             EeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE----ccCCeEEEcccCCceecc
Confidence            999999997766554221 128888899999999999999999999999999999999    777899999999998775


Q ss_pred             ccccc---ceeecccCCCCccccC
Q psy11822        208 KAVCN---TYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~---~~~gt~~y~aPE~l~~  228 (229)
                      .....   ...+++.|+|||.+.+
T Consensus       155 ~~~~~~~~~~~~~~~y~~Pe~~~~  178 (258)
T smart00219      155 DDDYYKKKGGKLPIRWMAPESLKD  178 (258)
T ss_pred             cccccccccCCCcccccChHHhcc
Confidence            43111   2336788999998743

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0984|consensus

Probab=99.92  E-value=6.6e-26  Score=168.45  Aligned_cols=160  Identities=23%  Similarity=0.277  Sum_probs=125.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.|-+.++..+|...|+|.+.....+     +...+..+|+.+..+. ..|+++  ++++...  ....+|+.||.|
T Consensus        57 GayG~vekmrh~~sg~imAvKri~~tvn~-----q~q~r~L~dldi~~r~~~CPf~V--~FyGa~~--regdvwIcME~M  127 (282)
T KOG0984|consen   57 GAYGVVEKMRHIQSGTIMAVKRIRATVNS-----QEQKRLLMDLDIIMRTVDCPFTV--HFYGALF--REGDVWICMELM  127 (282)
T ss_pred             CccchhhheeeccCCeEEEEeeehhhcCh-----HHHHHHHHhhhhhccCCCCCeEE--Eeehhhh--ccccEEEeHHHh
Confidence            77999999999999999999998765332     2233457777776544 788876  5554332  334579999999


Q ss_pred             eCCC---CCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        132 RRSQ---YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       132 ~~~~---l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +-+.   +.+.+..   .+.+++....+|+..++.||.|||+ ..+||||+||+|||+    +..|++||||||.|..+.
T Consensus       128 ~tSldkfy~~v~~~---g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI----n~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  128 DTSLDKFYRKVLKK---GGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI----NYDGQVKICDFGISGYLV  200 (282)
T ss_pred             hhhHHHHHHHHHhc---CCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE----ccCCcEEEcccccceeeh
Confidence            8776   2222333   5678888899999999999999997 579999999999999    999999999999999887


Q ss_pred             cccccc-eeecccCCCCccccC
Q psy11822        208 KAVCNT-YLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~-~~gt~~y~aPE~l~~  228 (229)
                      ++...+ ..|...|||||.+..
T Consensus       201 dSiAkt~daGCkpYmaPEri~~  222 (282)
T KOG0984|consen  201 DSIAKTMDAGCKPYMAPERINP  222 (282)
T ss_pred             hhhHHHHhcCCCccCChhhcCc
Confidence            764443 678889999998864

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.92  E-value=6.5e-26  Score=183.57  Aligned_cols=163  Identities=17%  Similarity=0.141  Sum_probs=122.3

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+.     .++..||+|.++.....     .....+.+|+.+++.++|||++.  +++++.  .....+++
T Consensus        16 g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~ei~~l~~l~h~~iv~--~~~~~~--~~~~~~lv   86 (288)
T cd05050          16 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-----DMQADFQREAALMAEFDHPNIVK--LLGVCA--VGKPMCLL   86 (288)
T ss_pred             cccccEEEEEEcccCCCCcceeEEEEecCCCcCH-----HHHHHHHHHHHHHHhcCCCchhe--EEEEEc--CCCccEEE
Confidence            889999999864     36789999988753211     12335688999999999999974  444433  33457999


Q ss_pred             eeeeeCCCCCccCCCCC-------------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC
Q psy11822        128 MEVTRRSQYTGATAPPP-------------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP  188 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-------------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~  188 (229)
                      |||+++++|..++....                   ....+++..++.++.|++.||.|||+++++||||||+||++   
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~---  163 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV---  163 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe---
Confidence            99999998765554211                   11235666678899999999999999999999999999999   


Q ss_pred             CCCCccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        189 VRQPYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       189 ~~~~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                       +.++.++|+|||++.......    .....++..|+|||++.+
T Consensus       164 -~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         164 -GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY  206 (288)
T ss_pred             -cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence             778899999999988654321    122344667999998754

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.92  E-value=8.5e-26  Score=185.27  Aligned_cols=160  Identities=25%  Similarity=0.278  Sum_probs=123.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+++.||+|.+.......   ......+.+|+.+++.++|||++.  +.+++.  +....|+||||+
T Consensus        31 ~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~--~~~~~~lv~e~~  103 (313)
T cd06633          31 HGSFGAVYFATNSHTNEVVAVKKMSYSGKQT---NEKWQDIIKEVKFLQQLKHPNTIE--YKGCYL--KEHTAWLVMEYC  103 (313)
T ss_pred             cCCCeEEEEEEECCCCcEEEEEEEeccccCc---hHHHHHHHHHHHHHHhCCCCCCcc--EEEEEE--eCCEEEEEEecC
Confidence            3899999999998899999999876432111   112335678999999999999974  444433  334578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      .++.+..+...   ...+++.++..++.|++.||.|||++|++|+||+|+||++    +.++.++|+|||++.....  .
T Consensus       104 ~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili----~~~~~~kL~dfg~~~~~~~--~  174 (313)
T cd06633         104 LGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL----TEPGQVKLADFGSASKSSP--A  174 (313)
T ss_pred             CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE----CCCCCEEEeecCCCcccCC--C
Confidence            76544443322   2357888888999999999999999999999999999999    7778999999999865432  2


Q ss_pred             cceeecccCCCCcccc
Q psy11822        212 NTYLQSRYYRAPEIIL  227 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~  227 (229)
                      ....|+..|+|||++.
T Consensus       175 ~~~~~~~~y~aPE~~~  190 (313)
T cd06633         175 NSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCccccccccChhhcc
Confidence            4567889999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=1.1e-25  Score=185.83  Aligned_cols=159  Identities=25%  Similarity=0.328  Sum_probs=122.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+......    ......+.+|+.+++.++|||++.  +.+++.. .....+++|||+.
T Consensus        21 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~--~~~~~~~-~~~~~~lv~e~~~   93 (328)
T cd07856          21 GAFGLVCSARDQLTGQNVAIKKIMKPFST----PVLAKRTYRELKLLKHLRHENIIS--LSDIFIS-PLEDIYFVTELLG   93 (328)
T ss_pred             cCCeEEEEEEECCCCCEEEEEEecccccc----cchhHHHHHHHHHHHhcCCCCeee--EeeeEec-CCCcEEEEeehhc
Confidence            89999999999999999999987643211    112335578999999999999974  4444432 2235789999985


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      + ++..+...    ..+++..+..++.|+++||+|||+.+|+||||+|+||++    +..+.++|+|||++...... ..
T Consensus        94 ~-~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili----~~~~~~~l~dfg~~~~~~~~-~~  163 (328)
T cd07856          94 T-DLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI----NENCDLKICDFGLARIQDPQ-MT  163 (328)
T ss_pred             c-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE----CCCCCEEeCccccccccCCC-cC
Confidence            4 55444432    346777778899999999999999999999999999999    77889999999999865432 24


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...+++.|+|||++.+
T Consensus       164 ~~~~~~~y~aPE~~~~  179 (328)
T cd07856         164 GYVSTRYYRAPEIMLT  179 (328)
T ss_pred             CCcccccccCceeeec
Confidence            4577889999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.92  E-value=1e-25  Score=186.98  Aligned_cols=159  Identities=19%  Similarity=0.238  Sum_probs=121.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc------------
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN------------  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~------------  120 (229)
                      |+||.||+|.+..+|+.||+|.+....      ....+.+.+|+.+++.++||||+  .+++......            
T Consensus        16 g~~g~vy~~~~~~~~~~v~iK~i~~~~------~~~~~~~~~Ei~~l~~l~h~~i~--~~~~~~~~~~~~~~~~~~~~~~   87 (342)
T cd07854          16 GSNGLVFSAVDSDCDKRVAVKKIVLTD------PQSVKHALREIKIIRRLDHDNIV--KVYEVLGPSGSDLTEDVGSLTE   87 (342)
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEecCC------CchHHHHHHHHHHHHhcCCCcch--hhHhhhcccccccccccccccc
Confidence            899999999999999999999876532      12334567899999999999997  3443332211            


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ....++||||+++ ++......    ..+++..++.++.|++.||.|||+.|++||||||+||++..   .++.++|+||
T Consensus        88 ~~~~~lv~e~~~~-~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~---~~~~~kl~df  159 (342)
T cd07854          88 LNSVYIVQEYMET-DLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT---EDLVLKIGDF  159 (342)
T ss_pred             cceEEEEeecccc-cHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC---CCceEEECCc
Confidence            1246899999985 44433332    35888889999999999999999999999999999999922   3457999999


Q ss_pred             CcceecCcc-----cccceeecccCCCCcccc
Q psy11822        201 GSASHVSKA-----VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       201 g~a~~~~~~-----~~~~~~gt~~y~aPE~l~  227 (229)
                      |++..+...     ......|+..|+|||++.
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  191 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLL  191 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHh
Confidence            999876432     112346788999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.2e-25  Score=186.70  Aligned_cols=160  Identities=27%  Similarity=0.387  Sum_probs=124.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||+|++......    ......+.+|+.+++.+.|||++.  +.+++...+    ....++|+
T Consensus        26 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~lv~   99 (343)
T cd07851          26 GAYGQVCSAFDTKTGRKVAIKKLSRPFQS----AIHAKRTYRELRLLKHMDHENVIG--LLDVFTPASSLEDFQDVYLVT   99 (343)
T ss_pred             CCceEEEEEEECCCCcEEEEEecccccch----hhHHHHHHHHHHHHHhccCCCHHH--HHHHhhccccccccccEEEEE
Confidence            89999999999999999999987653211    112234578999999999999973  444333221    23478999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+. +++..+...    ..+++..+..++.|++.||.|||+.||+||||||+||++    +.++.++|+|||++.....
T Consensus       100 e~~~-~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill----~~~~~~kL~dfg~~~~~~~  170 (343)
T cd07851         100 HLMG-ADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV----NEDCELKILDFGLARHTDD  170 (343)
T ss_pred             ecCC-CCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----CCCCCEEEccccccccccc
Confidence            9984 455444443    358888999999999999999999999999999999999    7778999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....++..|+|||.+.+
T Consensus       171 ~-~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         171 E-MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             c-ccCCcccccccCHHHHhC
Confidence            3 345678889999998753

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.92  E-value=1.2e-25  Score=178.65  Aligned_cols=164  Identities=15%  Similarity=0.196  Sum_probs=127.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|..+|+|.+......    ....+.+.+|+.+++.++|+|++  .+++.+.  .....++|+||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~E~~~l~~~~h~~i~--~~~~~~~--~~~~~~lv~e~~   81 (257)
T cd08225          10 EGSFGKIYLAKAKSDSEHCVIKEIDLTKMP----VKEKEASKKEVILLAKMKHPNIV--TFFASFQ--ENGRLFIVMEYC   81 (257)
T ss_pred             CCCcceEEEEEEcCCCceEEEEEeeHhhcc----chhhHHHHHHHHHHHhCCCCChh--hhhheec--cCCeEEEEEecC
Confidence            389999999999999999999998764221    12234567899999999999997  4554443  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++........ ...+++..+..++.|+++||.|||+.+++|+||||+||++    +.+ ..++|+|||.+...... 
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~----~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          82 DGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFL----SKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----cCCCCeEEecccccchhccCCc
Confidence            9999766554322 1246778889999999999999999999999999999999    544 36799999999876543 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~ape~~~~  176 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQN  176 (257)
T ss_pred             ccccccCCCccccCHHHHcC
Confidence             2234568899999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=1.2e-25  Score=180.41  Aligned_cols=161  Identities=17%  Similarity=0.110  Sum_probs=122.8

Q ss_pred             cCCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+   ...||+|.......     ....+.+.+|+.+++.+.||||+.  .++++..   ...++||
T Consensus        16 ~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~--~~~~~~~---~~~~lv~   85 (270)
T cd05056          16 EGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-----PSVREKFLQEAYIMRQFDHPHIVK--LIGVITE---NPVWIVM   85 (270)
T ss_pred             CccceeEEEEEEecCCCCCcceEEEecCCcCC-----HHHHHHHHHHHHHHHhCCCCchhc--eeEEEcC---CCcEEEE
Confidence            399999999987543   45799998765321     122346688999999999999974  4444332   3468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..++....  ..+++..++.++.|++.||+|||+.+++|+||||+||++    +..+.++|+|||+++....
T Consensus        86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili----~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          86 ELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV----SSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE----ecCCCeEEccCceeeeccc
Confidence            9999999877765422  247888889999999999999999999999999999999    7777999999999987654


Q ss_pred             cc---ccceeecccCCCCccccC
Q psy11822        209 AV---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~---~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   .....+++.|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~  182 (270)
T cd05056         160 ESYYKASKGKLPIKWMAPESINF  182 (270)
T ss_pred             ccceecCCCCccccccChhhhcc
Confidence            32   122334467999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=8.7e-26  Score=179.14  Aligned_cols=165  Identities=19%  Similarity=0.209  Sum_probs=130.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..||+|++......    ......+.+|+++++.++|+|++.  ..+.+..  ....++|+||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~--~~~~~~~--~~~~~lv~e~~   81 (258)
T cd08215          10 KGSFGKVYLVRRKSDGKLYVLKEIDLSNMS----EKEREDALNEVKILKKLNHPNIIK--YYESFEE--KGKLCIVMEYA   81 (258)
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEEeecccCC----hHHHHHHHHHHHHHHhcCCCChhh--eEEEEec--CCEEEEEEEec
Confidence            389999999999989999999998754221    122335688999999999999974  3333322  25678999999


Q ss_pred             eCCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++...+.... ....+++.++..++.|++.||.|||+.|++|+||+|+||++    +.++.++|+|||.+...... 
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL----TSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE----cCCCcEEECCccceeecccCc
Confidence            9998766554321 12468888899999999999999999999999999999999    77789999999999877554 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|++.|+|||.+.+
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~  177 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQN  177 (258)
T ss_pred             ceecceeeeecccChhHhcc
Confidence             3345678999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=1.6e-25  Score=178.04  Aligned_cols=159  Identities=17%  Similarity=0.127  Sum_probs=123.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+. ++..+|+|.+.....       ..+.+.+|+++++.++|||++.  +++++.  .....++||||+
T Consensus        14 ~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~~v~e~~   81 (256)
T cd05112          14 SGQFGLVWLGYWL-EKRKVAIKTIREGAM-------SEEDFIEEAQVMMKLSHPKLVQ--LYGVCT--ERSPICLVFEFM   81 (256)
T ss_pred             CcccceEEEEEEe-CCCeEEEEECCCCCC-------CHHHHHHHHHHHHhCCCCCeee--EEEEEc--cCCceEEEEEcC
Confidence            3889999999875 467899998765321       2235678999999999999974  444433  334578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++++..+....  ...+++..+..++.|++.||+|||+.+++|+||||+||++    +.++.++|+|||++........
T Consensus        82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i----~~~~~~~l~d~g~~~~~~~~~~  155 (256)
T cd05112          82 EHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV----GENQVVKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE----cCCCeEEECCCcceeecccCcc
Confidence            999977665432  1247778889999999999999999999999999999999    7777999999999986644322


Q ss_pred             c---ceeecccCCCCccccC
Q psy11822        212 N---TYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~---~~~gt~~y~aPE~l~~  228 (229)
                      .   ...++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~~aPe~~~~  175 (256)
T cd05112         156 TSSTGTKFPVKWSSPEVFSF  175 (256)
T ss_pred             cccCCCccchhhcCHhHhcc
Confidence            2   2334568999998864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=3.3e-25  Score=178.75  Aligned_cols=160  Identities=26%  Similarity=0.406  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||+|.+.......     ......+|+..++.+. |+|++  .+++++..  ....++||||+
T Consensus        10 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~e~~~l~~~~~h~~i~--~~~~~~~~--~~~~~lv~e~~   80 (283)
T cd07830          10 GTFGSVYLARNKETGELVAIKKMKKKFYSW-----EECMNLREVKSLRKLNEHPNIV--KLKEVFRE--NDELYFVFEYM   80 (283)
T ss_pred             CCceEEEEEEECCCCcEEEEEEehhhccch-----hHHHHHHHHHHHHhccCCCCch--hHHHHhhc--CCcEEEEEecC
Confidence            899999999998889999999877542211     1112256888888898 99997  45555543  45679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                       ++++........ ...+++.++..++.|++.||.|||+++++|+||+|+||++    +..+.++|+|||++...... .
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i----~~~~~~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV----SGPEVVKIADFGLAREIRSRPP  154 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCCEEEeecccceeccCCCC
Confidence             555444333311 1357888899999999999999999999999999999999    77889999999999877543 3


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....++..|+|||++.
T Consensus       155 ~~~~~~~~~~~aPE~~~  171 (283)
T cd07830         155 YTDYVSTRWYRAPEILL  171 (283)
T ss_pred             cCCCCCcccccCceeee
Confidence            34567888999999874

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=2.2e-25  Score=180.52  Aligned_cols=164  Identities=21%  Similarity=0.250  Sum_probs=126.3

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||.||+|++.   .+++.||+|+++.....  ......+.+.+|+.++..+ +||||+.  +.+.+.  .....++|
T Consensus        10 ~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~~~~E~~~l~~~~~~~~i~~--~~~~~~--~~~~~~lv   83 (288)
T cd05583          10 TGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV--QKAKTAEHTRTERQVLEAVRRCPFLVT--LHYAFQ--TDTKLHLI   83 (288)
T ss_pred             cCCCceEEEEEEeccccCCcEEEEEEEehHHHH--hhhhHHHHHHHHHHHHHhccCCcchhh--hheeee--cCCEEEEE
Confidence            4899999999853   46789999998764322  2223344668899999999 6999974  333332  33457899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++++++......   ...+++..+..++.|+++||.|||+.+++||||+|+||++    +.++.++|+|||+++...
T Consensus        84 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~----~~~~~~~l~dfg~~~~~~  156 (288)
T cd05583          84 LDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL----DSEGHVVLTDFGLSKEFL  156 (288)
T ss_pred             EecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE----CCCCCEEEEECccccccc
Confidence            999999987666543   2357888888999999999999999999999999999999    777899999999988764


Q ss_pred             ccc---ccceeecccCCCCccccC
Q psy11822        208 KAV---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~---~~~~~gt~~y~aPE~l~~  228 (229)
                      ...   .....|+..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~  180 (288)
T cd05583         157 AEEEERAYSFCGTIEYMAPEVIRG  180 (288)
T ss_pred             cccccccccccCCccccCHHHhcC
Confidence            331   233568899999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.91  E-value=2.9e-25  Score=180.58  Aligned_cols=168  Identities=17%  Similarity=0.081  Sum_probs=107.2

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHH---HHHHhhh--hhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFID---LLKRMLT--MDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~---~~~~~~~--~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|.+..+   +..+|+|+.......   .......  ......+...+..+.|+|++................
T Consensus        23 G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  102 (294)
T PHA02882         23 GGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYR  102 (294)
T ss_pred             CCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCceEE
Confidence            99999999998877   678888864321100   0000000  011123334455678888864322211111111234


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      +++++++...... ....   ....++..+..++.|++.||.|||+++|+||||||+|||+    +..+.++|+|||+|+
T Consensus       103 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill----~~~~~~~l~DFGla~  174 (294)
T PHA02882        103 FILLEKLVENTKE-IFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV----DGNNRGYIIDYGIAS  174 (294)
T ss_pred             EEEEehhccCHHH-HHHh---hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCcEEEEEcCCce
Confidence            6677776544322 2121   1124556678899999999999999999999999999999    777899999999998


Q ss_pred             ecCcc---------cccceeecccCCCCccccC
Q psy11822        205 HVSKA---------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~---------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+...         ......||+.|+|||++.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~  207 (294)
T PHA02882        175 HFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG  207 (294)
T ss_pred             eeccCCcccccccccccccCCCccccCHHHhCC
Confidence            76321         1123579999999998765

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.91  E-value=1.7e-25  Score=170.45  Aligned_cols=142  Identities=19%  Similarity=0.205  Sum_probs=103.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHH---------Hh-----------hhhhhhhccccccccccCcccccee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLK---------RM-----------LTMDQVERRITPGEALNHAFVTLAH  111 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~---------~~-----------~~~~~~~~Ei~~l~~l~h~ni~~~~  111 (229)
                      .|+||.||+|.+. +|+.||+|+++........         ..           .......+|++.+..+.++++..+.
T Consensus         7 ~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~   85 (190)
T cd05147           7 TGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPE   85 (190)
T ss_pred             cccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCc
Confidence            4999999999986 8999999998764211000         00           0011234589999999888774333


Q ss_pred             hhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHH-HHCCCccccCCCCCeeeeCCCC
Q psy11822        112 LVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       112 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~L-H~~~iiHrDlkp~Nil~~~~~~  190 (229)
                      .+.   .   ...++||||++++++......   ...++..++..++.|++.+|.++ |+.||+||||||+|||+    +
T Consensus        86 ~~~---~---~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli----~  152 (190)
T cd05147          86 PIL---L---KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY----H  152 (190)
T ss_pred             EEE---e---cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----E
Confidence            221   1   123799999999876543222   23578888899999999999999 79999999999999999    4


Q ss_pred             CCccEEEeecCcceecCc
Q psy11822        191 QPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~  208 (229)
                       ++.++|+|||+|.....
T Consensus       153 -~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         153 -DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             -CCcEEEEEccccccCCC
Confidence             25899999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.91  E-value=9.4e-26  Score=180.66  Aligned_cols=169  Identities=20%  Similarity=0.153  Sum_probs=122.7

Q ss_pred             ccCCceeeeeeecCCCC------cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         51 CLDDIGQVNVPTDLEGG------ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      +.|+||.||+|++....      ..+|+|.+.....     ......+.+|+.+++.++||||+.  +++++.  .....
T Consensus         4 g~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~   74 (269)
T cd05044           4 GSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-----DQEKKEFLKEAHLMSNFNHPNIVK--LLGVCL--LNEPQ   74 (269)
T ss_pred             ccccceeEEeeeecccccCcccceeehhhhhhcccc-----hhhHHHHHHHHHHHHhcCCCCeee--Eeeeec--CCCCe
Confidence            34899999999876433      7899998764311     112335678999999999999984  444443  33457


Q ss_pred             ceeeeeeeCCCCCccCCCCC----CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEee
Q psy11822        125 VQMMEVTRRSQYTGATAPPP----PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVID  199 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~----~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~D  199 (229)
                      ++||||++++++..++....    ....+++.++..++.|++.||+|||+.+++|+||||+||++.... +....++|+|
T Consensus        75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~d  154 (269)
T cd05044          75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGD  154 (269)
T ss_pred             EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECC
Confidence            99999999999766543211    123467777889999999999999999999999999999994321 1223899999


Q ss_pred             cCcceecCccc----ccceeecccCCCCccccC
Q psy11822        200 FGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       200 Fg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ||++.......    .....++..|+|||++.+
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (269)
T cd05044         155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD  187 (269)
T ss_pred             cccccccccccccccCcccCCCccccCHHHHcc
Confidence            99997664321    123355678999998764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.91  E-value=2e-25  Score=179.82  Aligned_cols=162  Identities=27%  Similarity=0.343  Sum_probs=127.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|++|.||+|.+..+++.+|+|.++.....    ......+.+|+.+++.++|+||+  .++++...  ....++||||+
T Consensus         9 ~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~~--~~~~~~v~e~~   80 (283)
T cd05118           9 EGTYGVVYKARDKLTGEIVAIKKIKLRFES----EGIPKTALREIKLLKELNHPNII--KLLDVFRH--KGDLYLVFEFM   80 (283)
T ss_pred             cCCCceEEEEEcCCCCcEEEEEEecccccc----chhHHHHHHHHHHHHHhcCCCcc--hHHHhhcc--CCCEEEEEecc
Confidence            388999999999889999999988764322    12234567899999999999997  45555443  35679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      ++.....+...   ...+++..+..++.|++.||.|||+.+|+|+||||+||++    +.++.++|+|||.+....... 
T Consensus        81 ~~~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili----~~~~~~~l~df~~~~~~~~~~~  153 (283)
T cd05118          81 DTDLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI----NTEGVLKLADFGLARSFGSPVR  153 (283)
T ss_pred             CCCHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE----CCCCcEEEeeeeeeEecCCCcc
Confidence            87444433332   2358888899999999999999999999999999999999    777899999999998775532 


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~PE~~~~  172 (283)
T cd05118         154 PYTHYVVTRWYRAPELLLG  172 (283)
T ss_pred             cccCccCcccccCcHHHhc
Confidence             234568888999998754

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.91  E-value=1e-25  Score=182.34  Aligned_cols=163  Identities=21%  Similarity=0.232  Sum_probs=122.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|+||.||++.+..+++.||+|.+......     .....+.+|+.++.++. |+||+  .++++..  .....+++|||
T Consensus        14 ~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~e~~~l~~~~~~~~iv--~~~~~~~--~~~~~~~~~e~   84 (288)
T cd06616          14 RGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-----KEQKRLLMDLDVVMRSSDCPYIV--KFYGALF--REGDCWICMEL   84 (288)
T ss_pred             CCCceEEEEEEECCCCCEEEEEEehhccCh-----HHHHHHHHHHHHHHHhcCCCCEe--eeeeEEe--cCCcEEEEEec
Confidence            389999999999999999999988754222     12335678898998885 99997  4444433  33456899999


Q ss_pred             eeCCC--CCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        131 TRRSQ--YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       131 ~~~~~--l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +....  +....... ....+++..+..++.|++.||+|||+ .+++||||||+||++    +..+.++|+|||++..+.
T Consensus        85 ~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          85 MDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL----DRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             ccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE----ccCCcEEEeecchhHHhc
Confidence            87643  21111110 12358888889999999999999997 499999999999999    777899999999997664


Q ss_pred             cc-cccceeecccCCCCccccC
Q psy11822        208 KA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .. ......|++.|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd06616         160 DSIAKTRDAGCRPYMAPERIDP  181 (288)
T ss_pred             cCCccccccCccCccCHHHhcc
Confidence            43 2234578899999999854

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.91  E-value=2.1e-25  Score=176.12  Aligned_cols=161  Identities=24%  Similarity=0.283  Sum_probs=131.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|++|.||+|.+..+++.+++|++.....      .....+.+|+..++.++|+|++  .+.+.+.  .....++++||+
T Consensus        10 ~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~--~~~~~~~--~~~~~~l~~e~~   79 (253)
T cd05122          10 KGGFGEVYKARHKRTGKEVAIKVIKLESK------EKKEKIINEIQILKKCKHPNIV--KYYGSYL--KKDELWIVMEFC   79 (253)
T ss_pred             cCCceEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHHHHhCCCCCEe--EEEEEEe--cCCeEEEEEecC
Confidence            38899999999988999999999876422      2334668899999999999997  3444433  234578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +++++..+.....  ..+++..+..++.|++.||.+||++|++|+||+|+||++    +.++.++|+|||.+....... 
T Consensus        80 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~  153 (253)
T cd05122          80 SGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL----TSDGEVKLIDFGLSAQLSDTKA  153 (253)
T ss_pred             CCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE----ccCCeEEEeecccccccccccc
Confidence            9999877755522  358888889999999999999999999999999999999    777899999999998776543 


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~PE~~~~  171 (253)
T cd05122         154 RNTMVGTPYWMAPEVING  171 (253)
T ss_pred             ccceecCCcccCHHHHcC
Confidence            355688899999998864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.91  E-value=2.1e-25  Score=179.06  Aligned_cols=167  Identities=14%  Similarity=0.124  Sum_probs=121.8

Q ss_pred             cCCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc----ccc
Q psy11822         52 LDDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV----KAS  124 (229)
Q Consensus        52 ~g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~----~~~  124 (229)
                      .|+||.||+|.+.   .++..||+|++......    ....+++.+|+++++.++|||++.  ++++......    ...
T Consensus         9 ~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~~~~   82 (273)
T cd05074           9 KGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS----SSDIEEFLREAACMKEFDHPNVIK--LIGVSLRSRAKGRLPIP   82 (273)
T ss_pred             CCCCCCEEeeEeeccCCCceEEEEEEeccccCC----hHHHHHHHHHHHHHhcCCCCCcce--EEEEEccCCCCCcccce
Confidence            4899999999854   35789999988653211    112345688999999999999974  4443322111    224


Q ss_pred             ceeeeeeeCCCCCccCCC---CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        125 VQMMEVTRRSQYTGATAP---PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      ++++||+.++++..+...   ......+++..++.++.|++.||+|||+++|+||||||+||++    +.++.+||+|||
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili----~~~~~~kl~dfg  158 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML----NENMTVCVADFG  158 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE----cCCCCEEECccc
Confidence            688999999986544321   1112246777789999999999999999999999999999999    777899999999


Q ss_pred             cceecCccc----ccceeecccCCCCccccC
Q psy11822        202 SASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      +++......    .....+++.|++||.+.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05074         159 LSKKIYSGDYYRQGCASKLPVKWLALESLAD  189 (273)
T ss_pred             ccccccCCcceecCCCccCchhhcCHhHHhc
Confidence            998764321    123345678999998754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.91  E-value=1.5e-25  Score=181.24  Aligned_cols=159  Identities=25%  Similarity=0.236  Sum_probs=128.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|++.....       ..+.+.+|++.++.++|+|++.  +++.+.  .....++++||++
T Consensus        30 g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~--~~~~~~--~~~~~~lv~e~~~   98 (286)
T cd06614          30 GASGEVYKATDRATGKEVAIKKMRLRKQ-------NKELIINEILIMKDCKHPNIVD--YYDSYL--VGDELWVVMEYMD   98 (286)
T ss_pred             CCCeEEEEEEEccCCcEEEEEEEecCch-------hHHHHHHHHHHHHHCCCCCeeE--EEEEEE--ECCEEEEEEeccC
Confidence            8899999999988899999999875321       2335678999999999999974  444433  2356799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +++|..++....  ..+++.++..++.|++.||.|||+.|++|+||+|+||++    +.++.++|+|||++......  .
T Consensus        99 ~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i----~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          99 GGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL----SKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE----cCCCCEEECccchhhhhccchhh
Confidence            999877766522  268888889999999999999999999999999999999    77789999999998766443  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....++..|+|||++.+
T Consensus       173 ~~~~~~~~~y~~PE~~~~  190 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKR  190 (286)
T ss_pred             hccccCCcccCCHhHhcC
Confidence            234567889999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.91  E-value=1.7e-25  Score=183.01  Aligned_cols=159  Identities=26%  Similarity=0.268  Sum_probs=122.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.+|+|.+......   .......+.+|+.+++.++|+|++.  ..+++.  .....++||||+.
T Consensus        26 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   98 (308)
T cd06634          26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQ---SNEKWQDIIKEVRFLQKLRHPNTIQ--YRGCYL--REHTAWLVMEYCL   98 (308)
T ss_pred             CCCEEEEEEEEcCCCcEEEEEEEeccccc---ChHHHHHHHHHHHHHHhCCCCCccc--EEEEEE--cCCeeEEEEEccC
Confidence            89999999999989999999987642111   1112235578999999999999974  333333  2345789999997


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++.+..+...   ...+++.++..++.|++.||.|||+.+++||||+|+||++    +.++.++|+|||++......  .
T Consensus        99 ~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~----~~~~~~kl~dfg~~~~~~~~--~  169 (308)
T cd06634          99 GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--N  169 (308)
T ss_pred             CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE----CCCCcEEECCcccceeecCc--c
Confidence            6443333222   2347788889999999999999999999999999999999    77789999999998866443  3


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      ...|++.|+|||++.
T Consensus       170 ~~~~~~~y~aPE~~~  184 (308)
T cd06634         170 XFVGTPYWMAPEVIL  184 (308)
T ss_pred             cccCCccccCHHHHh
Confidence            457888999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0668|consensus

Probab=99.91  E-value=3.4e-25  Score=167.13  Aligned_cols=155  Identities=20%  Similarity=0.312  Sum_probs=130.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.|++||.|....+.++++||++++-.         ...+.||+.+|..|. ||||+  .+++...+.....-.+++||+
T Consensus        49 GKYSEVFeg~~~~~~eK~ViKiLKPVk---------kkKIkREikIL~nL~gg~NIi--~L~DiV~Dp~SktpaLiFE~v  117 (338)
T KOG0668|consen   49 GKYSEVFEGINITNNEKCVIKILKPVK---------KKKIKREIKILQNLRGGPNII--KLLDIVKDPESKTPSLIFEYV  117 (338)
T ss_pred             ccHhhHhcccccCCCceEEEeeechHH---------HHHHHHHHHHHHhccCCCCee--ehhhhhcCccccCchhHhhhh
Confidence            889999999999999999999998742         124589999999995 99997  677777766666678999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      ++.++..+-.      .|+..+++.++.|++.||.|||+.||.|||+||.|+++   +.+.-.++|+|+|+|-..-+. .
T Consensus       118 ~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmI---dh~~rkLrlIDWGLAEFYHp~~e  188 (338)
T KOG0668|consen  118 NNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE  188 (338)
T ss_pred             ccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeee---chhhceeeeeecchHhhcCCCce
Confidence            9999877744      48888999999999999999999999999999999999   223458999999999988665 4


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .+..+.+..|--||+|-
T Consensus       189 YnVRVASRyfKGPELLV  205 (338)
T KOG0668|consen  189 YNVRVASRYFKGPELLV  205 (338)
T ss_pred             eeeeeehhhcCCchhee
Confidence            45567777788999874

>KOG0983|consensus

Probab=99.91  E-value=2e-25  Score=172.26  Aligned_cols=156  Identities=22%  Similarity=0.252  Sum_probs=120.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+-|.|++++.+.+|...|||.+.+...     .....++...+.++... ..|+|+  .-++|+-.  ...+++.||.|
T Consensus       103 GtcG~V~k~~~rs~~~iiAVK~M~rt~N-----kee~kRILmDldvv~~s~dcpyIV--~c~GyFi~--n~dV~IcMelM  173 (391)
T KOG0983|consen  103 GTCGQVWKMRFRSTGHIIAVKQMRRTGN-----KEENKRILMDLDVVLKSHDCPYIV--QCFGYFIT--NTDVFICMELM  173 (391)
T ss_pred             CCccceEEEEEcccceEEEEEeecccCC-----HHHHHHHHHhhhHHhhccCCCeee--eeeeEEee--CchHHHHHHHH
Confidence            6679999999999999999999887432     22233556666666554 478887  45556543  34578889988


Q ss_pred             eCCC--CCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        132 RRSQ--YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       132 ~~~~--l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ...-  |...+.     +++++.-+.++...++.||.||.. ++|||||+||+|||+    +..|.+||||||.|.++-+
T Consensus       174 s~C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl----De~GniKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  174 STCAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGNIKLCDFGISGRLVD  244 (391)
T ss_pred             HHHHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE----ccCCCEEeecccccceeec
Confidence            6544  222222     258888889999999999999985 689999999999999    9999999999999988755


Q ss_pred             c-cccceeecccCCCCccc
Q psy11822        209 A-VCNTYLQSRYYRAPEII  226 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l  226 (229)
                      . ..+...|.+.|||||-+
T Consensus       245 SkAhtrsAGC~~YMaPERi  263 (391)
T KOG0983|consen  245 SKAHTRSAGCAAYMAPERI  263 (391)
T ss_pred             ccccccccCCccccCcccc
Confidence            4 44567899999999976

>KOG4278|consensus

Probab=99.91  E-value=2.4e-25  Score=188.22  Aligned_cols=159  Identities=16%  Similarity=0.160  Sum_probs=130.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |.||.||.|.|+.-...||||.++..       .+.++.|..|+.+|+.+.|||++  ++++.  |.....+|||+|||.
T Consensus       278 GQYGeVYeGvWKkyslTvAVKtLKED-------tMeveEFLkEAAvMKeikHpNLV--qLLGV--CT~EpPFYIiTEfM~  346 (1157)
T KOG4278|consen  278 GQYGEVYEGVWKKYSLTVAVKTLKED-------TMEVEEFLKEAAVMKEIKHPNLV--QLLGV--CTHEPPFYIITEFMC  346 (1157)
T ss_pred             Ccccceeeeeeeccceeeehhhhhhc-------chhHHHHHHHHHHHHhhcCccHH--HHhhh--hccCCCeEEEEeccc
Confidence            88999999999988899999998874       44577889999999999999998  56655  445567899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      .|.|.++++.- ....++....+.++.||.+|+.||.++++|||||...|+|+    .++..||++|||+++.+..+.++
T Consensus       347 yGNLLdYLRec-nr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV----gEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  347 YGNLLDYLREC-NRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             CccHHHHHHHh-chhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc----cccceEEeeccchhhhhcCCcee
Confidence            99965554431 12235555567789999999999999999999999999999    77889999999999999877555


Q ss_pred             ceee---cccCCCCcccc
Q psy11822        213 TYLQ---SRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~g---t~~y~aPE~l~  227 (229)
                      .-.|   ...|.|||.|.
T Consensus       422 AHAGAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  422 AHAGAKFPIKWTAPESLA  439 (1157)
T ss_pred             cccCccCcccccCccccc
Confidence            4444   35699999874

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.91  E-value=5.7e-25  Score=192.65  Aligned_cols=160  Identities=17%  Similarity=0.154  Sum_probs=104.0

Q ss_pred             CCceeeeeeecCCC----CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhh---hcccccccc
Q psy11822         53 DDIGQVNVPTDLEG----GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYA---HCNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~---~~~~~~~~~  125 (229)
                      |+||.||+|++..+    +..||+|.+.......   ..     ..+  .++...+.++.. .+..+.   ........+
T Consensus       143 G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e---~~-----~~e--~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  211 (566)
T PLN03225        143 GAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE---IW-----MNE--RVRRACPNSCAD-FVYGFLEPVSSKKEDEYW  211 (566)
T ss_pred             CCCeEEEEEEEcCCccccCcEEEEEEecccchhH---HH-----HHH--HHHhhchhhHHH-HHHhhhcccccccCCceE
Confidence            99999999999888    9999999875421110   00     000  011111111110 001100   012345679


Q ss_pred             eeeeeeeCCCCCccCCCCCCC-----------C------ccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC
Q psy11822        126 QMMEVTRRSQYTGATAPPPPA-----------Q------VLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP  188 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~-----------~------~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~  188 (229)
                      +||||+++++|..+.......           .      ......+..++.|++.||.|||+.+|+||||||+|||+   
T Consensus       212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl---  288 (566)
T PLN03225        212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF---  288 (566)
T ss_pred             EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEE---
Confidence            999999999865554331100           0      01112245689999999999999999999999999999   


Q ss_pred             CCC-CccEEEeecCcceecCcc---cccceeecccCCCCcccc
Q psy11822        189 VRQ-PYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       189 ~~~-~~~~kl~DFg~a~~~~~~---~~~~~~gt~~y~aPE~l~  227 (229)
                       +. .+.+||+|||+|+.+...   ......|++.|||||++.
T Consensus       289 -~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        289 -SEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             -eCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence             53 468999999999866432   234578899999999753

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.91  E-value=7.1e-25  Score=176.54  Aligned_cols=162  Identities=26%  Similarity=0.323  Sum_probs=126.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.||.||+|++..+++.||+|.+.....    .....+.+.+|+.+++.++|+|++  .+.+++..  ....++||||+
T Consensus         9 ~g~~~~vy~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~--~~~~~~~~--~~~~~~v~e~~   80 (282)
T cd07829           9 EGTYGVVYKARDKKTGEIVALKKIRLDNE----EEGIPSTALREISLLKELKHPNIV--KLLDVIHT--ERKLYLVFEYC   80 (282)
T ss_pred             ccCcceEEEeeecCCCcEEEEEEeccccc----cccccHHHHHHHHHHHhcCCCCHH--HHHhhhhc--CCceEEEecCc
Confidence            38899999999999999999999876431    122233557889999999999997  45555443  35679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++ ++..++....  ..+++..+..++.|++.||.|||+.||+||||+|+||++    +.++.++|+|||++......  
T Consensus        81 ~~-~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~----~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          81 DM-DLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI----NRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             Cc-CHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE----cCCCCEEEecCCcccccCCCcc
Confidence            85 5555544411  358888899999999999999999999999999999999    77889999999999876443  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~aPE~~~~  172 (282)
T cd07829         154 TYTHEVVTLWYRAPEILLG  172 (282)
T ss_pred             ccCccccCcCcCChHHhcC
Confidence            2234556778999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.91  E-value=5.1e-25  Score=168.15  Aligned_cols=143  Identities=20%  Similarity=0.196  Sum_probs=105.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHH--H------------------hhhhhhhhccccccccccCcccccee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLK--R------------------MLTMDQVERRITPGEALNHAFVTLAH  111 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--~------------------~~~~~~~~~Ei~~l~~l~h~ni~~~~  111 (229)
                      .|+||+||+|.+. +|+.||||+++........  +                  ......+.+|++.+.++.|+++..+.
T Consensus         7 ~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~   85 (190)
T cd05145           7 TGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPE   85 (190)
T ss_pred             cCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence            4999999999987 8999999998764211000  0                  00112346788899999999886544


Q ss_pred             hhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCC
Q psy11822        112 LVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       112 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~  190 (229)
                      .+.+.      ..++||||++++++......   ...++..++..++.|++.++.+||+ .||+||||||+||++    +
T Consensus        86 ~~~~~------~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll----~  152 (190)
T cd05145          86 PILLK------KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY----H  152 (190)
T ss_pred             EEEec------CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEE----E
Confidence            43221      13799999999853322111   2346777888999999999999999 999999999999999    5


Q ss_pred             CCccEEEeecCcceecCcc
Q psy11822        191 QPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~  209 (229)
                       ++.++|+|||+|+..+.+
T Consensus       153 -~~~~~liDFG~a~~~~~~  170 (190)
T cd05145         153 -DGKPYIIDVSQAVELDHP  170 (190)
T ss_pred             -CCCEEEEEcccceecCCC
Confidence             568999999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0665|consensus

Probab=99.90  E-value=1.2e-25  Score=176.45  Aligned_cols=156  Identities=27%  Similarity=0.380  Sum_probs=126.7

Q ss_pred             eeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceeeeeee
Q psy11822         57 QVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMMEVTR  132 (229)
Q Consensus        57 ~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~e~~~  132 (229)
                      .|-.|.|..++++||+|.+..++.+    .....+..+|..++..++|+||+  .+..++..    .....+|+|||+++
T Consensus        31 ~v~~a~D~v~~~~v~ikk~~~pf~n----~~~akra~rel~l~~~v~~~nii--~l~n~ftP~~~l~~~~e~y~v~e~m~  104 (369)
T KOG0665|consen   31 IVVAAFDQVLGRPVAIKKLSRPFQN----QTHAKRAYRELKLMKCVNHKNII--SLLNVFTPQKTLEEFQEVYLVMELMD  104 (369)
T ss_pred             eEEecchhhccCceehhhhcCcccc----Cccchhhhhhhhhhhhhccccee--eeeeccCccccHHHHHhHHHHHHhhh
Confidence            5888899999999999998776433    33344669999999999999997  33333321    12235799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      .+.-..+..      .++.+....|+.|++.|++|||+.||+||||||+||++    +.++.+||+|||+|+.-... ..
T Consensus       105 ~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv----~~~~~lKi~dfg~ar~e~~~~~m  174 (369)
T KOG0665|consen  105 ANLCQVILM------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV----NSDCTLKILDFGLARTEDTDFMM  174 (369)
T ss_pred             hHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee----cchhheeeccchhhcccCccccc
Confidence            876333322      36777778999999999999999999999999999999    88999999999999988777 66


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      +.++.|..|.|||++.|
T Consensus       175 tpyVvtRyyrapevil~  191 (369)
T KOG0665|consen  175 TPYVVTRYYRAPEVILG  191 (369)
T ss_pred             CchhheeeccCchheec
Confidence            78999999999999876

>KOG1027|consensus

Probab=99.90  E-value=7.8e-25  Score=189.83  Aligned_cols=161  Identities=22%  Similarity=0.233  Sum_probs=118.9

Q ss_pred             CCce-eeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIG-QVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg-~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |.-| .||+|...  |+.||||.+-.++.+         .+++||..|+.- .||||++..    +...+....||..|.
T Consensus       520 Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~~---------~A~rEi~lL~eSD~H~NviRyy----c~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  520 GSNGTVVFRGVYE--GREVAVKRLLEEFFD---------FAQREIQLLQESDEHPNVIRYY----CSEQDRQFLYIALEL  584 (903)
T ss_pred             CCCCcEEEEEeeC--CceehHHHHhhHhHH---------HHHHHHHHHHhccCCCceEEEE----eeccCCceEEEEehH
Confidence            3333 39999875  899999987765432         447899998777 899998533    223345668999999


Q ss_pred             eeCCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC-CCccEEEeecCcceecCc
Q psy11822        131 TRRSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~~  208 (229)
                      |.... ++++... .+.........+.++.|+++||++||+.+||||||||.||||..++. ....++|+|||+++.+..
T Consensus       585 C~~sL-~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~  663 (903)
T KOG1027|consen  585 CACSL-QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG  663 (903)
T ss_pred             hhhhH-HHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence            98765 2332221 11111111455788999999999999999999999999999977532 236999999999999976


Q ss_pred             c-----cccceeecccCCCCccccCC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~~  229 (229)
                      +     ...+..||-+|+|||+|+++
T Consensus       664 ~~sS~~r~s~~sGt~GW~APE~L~~~  689 (903)
T KOG1027|consen  664 GKSSFSRLSGGSGTSGWQAPEQLRED  689 (903)
T ss_pred             CcchhhcccCCCCcccccCHHHHhcc
Confidence            4     34678999999999999763

>KOG0671|consensus

Probab=99.90  E-value=2e-24  Score=173.09  Aligned_cols=164  Identities=27%  Similarity=0.287  Sum_probs=126.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC--cc--ccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH--AF--VTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~n--i~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.|-.+.+..++..||+|+++.-       ....+...-|+++|.++.+  |+  ...+.+.++++..  ...+||+
T Consensus       100 GtFGkV~ec~D~~~~~~vAlKIik~V-------~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr--ghiCivf  170 (415)
T KOG0671|consen  100 GTFGKVVECWDRETKEHVALKIIKNV-------DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR--GHICIVF  170 (415)
T ss_pred             CcccceEEEeecCCCceehHHHHHHH-------HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc--CceEEEE
Confidence            89999999999999999999998763       2223345778999988832  21  1123444445433  3568999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC----------------CCC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV----------------RQP  192 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~----------------~~~  192 (229)
                      |.+..++++.+..+..  .+++-..++.+++|+++++++||+.+++|-||||+|||+++..                ..+
T Consensus       171 ellG~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks  248 (415)
T KOG0671|consen  171 ELLGLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKS  248 (415)
T ss_pred             eccChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCC
Confidence            9998888777755433  3577788999999999999999999999999999999996532                134


Q ss_pred             ccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        193 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..|+|+|||.|+.-... .+..+.|..|+|||+++|
T Consensus       249 ~~I~vIDFGsAtf~~e~-hs~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  249 TAIKVIDFGSATFDHEH-HSTIVSTRHYRAPEVILG  283 (415)
T ss_pred             cceEEEecCCcceeccC-cceeeeccccCCchheec
Confidence            58999999999855433 367899999999999986

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.90  E-value=4.9e-25  Score=176.58  Aligned_cols=169  Identities=21%  Similarity=0.222  Sum_probs=126.3

Q ss_pred             cCCceeeeeeecCC-CCcEEEEehhhHHHHHHH----HHhhhhhhhhcccccccc-ccCccccceehhhhhhcccccccc
Q psy11822         52 LDDIGQVNVPTDLE-GGELLAEKADRREFIDLL----KRMLTMDQVERRITPGEA-LNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~-~~~~vaiK~~~~~~~~~~----~~~~~~~~~~~Ei~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .|.||.||+|.+.. +++.+|+|.+........    ........+.+|+.++.+ ++||||+.  .++++.  .....+
T Consensus        10 ~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~--~~~~~~--~~~~~~   85 (269)
T cd08528          10 SGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVR--YYKTFL--ENDRLY   85 (269)
T ss_pred             CCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeee--EEeeEc--cCCeEE
Confidence            38899999999877 688999998764321110    112233455778887754 79999974  444433  334679


Q ss_pred             eeeeeeeCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        126 QMMEVTRRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      ++|||++++++..++.. ......+++..++.++.|++.||.|||+ .+++|+||+|+||++    +.++.++|+|||++
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~----~~~~~~~l~dfg~~  161 (269)
T cd08528          86 IVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML----GEDDKVTITDFGLA  161 (269)
T ss_pred             EEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE----CCCCcEEEecccce
Confidence            99999999987655322 1113357888889999999999999996 789999999999999    77789999999999


Q ss_pred             eecCcc-cccceeecccCCCCccccC
Q psy11822        204 SHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...... ......|+..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~  187 (269)
T cd08528         162 KQKQPESKLTSVVGTILYSCPEIVKN  187 (269)
T ss_pred             eecccccccccccCcccCcChhhhcC
Confidence            876554 3345678899999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.90  E-value=5.8e-25  Score=175.33  Aligned_cols=167  Identities=18%  Similarity=0.185  Sum_probs=124.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..++..+++|+++........ .....++.+|+.+++.++|||++  .+++++.  +....++||||+
T Consensus        10 ~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~   84 (260)
T cd08222          10 KGSFGTVYLVKDKKAVAEERLKVLKEIPVGELN-PNETVQANQEAQLLSKLDHPAIV--KFHASFL--ERDAFCIITEYC   84 (260)
T ss_pred             CCCCceEEEEEecCCCCcceEEEeccccccccC-cchHHHHHHHHHHHHhCCCCcHH--HHHHHHh--cCCceEEEEEeC
Confidence            389999999999877777777776542221111 11122446788899999999997  4555544  334578999999


Q ss_pred             eCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++..++.. ......+++.++..++.|++.||.|||+.|++|+||+|+||++    +. +.++|+|||++...... 
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili----~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFL----KN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEe----ec-CCEeecccCceeecCCCc
Confidence            99997655432 1123468888899999999999999999999999999999999    43 36999999999876432 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......|++.|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~  179 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKH  179 (260)
T ss_pred             ccccCCCCCcCccCHHHHcc
Confidence             2234568889999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-24  Score=175.40  Aligned_cols=165  Identities=25%  Similarity=0.309  Sum_probs=120.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhhcccc---cccc
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAHCNNV---KASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~~~~~---~~~~  125 (229)
                      .|+||.||+|++..+++.||+|.++......    .....+.+|+.+++.+   .|+|++  .+++++.....   ...+
T Consensus         9 ~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~l~~~~h~~i~--~~~~~~~~~~~~~~~~~~   82 (287)
T cd07838           9 EGAYGTVYKARDLNTGRFVALKKVRVPLSEE----GIPLSTLREIALLKQLESFEHPNIV--RLLDVCHGPRTDRELKLT   82 (287)
T ss_pred             ccCceEEEEEEECCCCCEEEEEEeccccccc----hhhhhHHHHHHHHHHhhccCCCCcc--eEEEEEeeccCCCCceeE
Confidence            3889999999998889999999987432111    1112334566655544   699997  44444432221   2378


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ++|||+++. +..++.... ...+++..++.++.|+++||+|||+.+++|+||+|+||++    +.++.++|+|||++..
T Consensus        83 l~~e~~~~~-l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili----~~~~~~~l~dfg~~~~  156 (287)
T cd07838          83 LVFEHVDQD-LATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV----TSDGQVKIADFGLARI  156 (287)
T ss_pred             EEehhcccC-HHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE----ccCCCEEEeccCccee
Confidence            999999864 333333211 1248888899999999999999999999999999999999    7778999999999987


Q ss_pred             cCcc-cccceeecccCCCCccccC
Q psy11822        206 VSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .... ......++..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~PE~~~~  180 (287)
T cd07838         157 YSFEMALTSVVVTLWYRAPEVLLQ  180 (287)
T ss_pred             ccCCcccccccccccccChHHhcc
Confidence            7543 2234567889999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.90  E-value=1.5e-24  Score=176.41  Aligned_cols=161  Identities=22%  Similarity=0.220  Sum_probs=118.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|.||.||+|.+..+++.||+|.++......     ....+.+|+.++... .|+||+  .+++++.  .....+++|||
T Consensus        25 ~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~e~~~~~~~~~~~~i~--~~~~~~~--~~~~~~~v~e~   95 (296)
T cd06618          25 SGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-----ENKRILMDLDVVLKSHDCPYIV--KCYGYFI--TDSDVFICMEL   95 (296)
T ss_pred             ccCCeEEEEEEECCCCeEEEEEEEeccCChH-----HHHHHHHHHHHHHhccCCCchH--hhheeee--cCCeEEEEeec
Confidence            3899999999999889999999987532111     112334566555555 599997  4555543  34467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +.+. +..+....  ...+++..+..++.|++.||.|||+ .+|+||||+|+||++    +.++.+||+|||++..+...
T Consensus        96 ~~~~-l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill----~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          96 MSTC-LDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL----DASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             cCcC-HHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE----cCCCCEEECccccchhccCC
Confidence            8653 33222221  1257778888999999999999997 699999999999999    77889999999999766432


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......+++.|+|||++.+
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~  188 (296)
T cd06618         169 KAKTRSAGCAAYMAPERIDP  188 (296)
T ss_pred             CcccCCCCCccccCHhhcCC
Confidence             2234467889999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.89  E-value=7.7e-24  Score=182.03  Aligned_cols=171  Identities=19%  Similarity=0.211  Sum_probs=113.1

Q ss_pred             CCceeeeeeecC----------------CCCcEEEEehhhHHHHHHHHH--------hhhhhhhhccccccccccCcccc
Q psy11822         53 DDIGQVNVPTDL----------------EGGELLAEKADRREFIDLLKR--------MLTMDQVERRITPGEALNHAFVT  108 (229)
Q Consensus        53 g~fg~Vy~a~~~----------------~~~~~vaiK~~~~~~~~~~~~--------~~~~~~~~~Ei~~l~~l~h~ni~  108 (229)
                      |+||.||+|.+.                ..++.||||.+..........        ....+....|+..+.+++|.++.
T Consensus       156 GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~  235 (507)
T PLN03224        156 GNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIA  235 (507)
T ss_pred             CCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccch
Confidence            999999999752                235689999976421110000        01122334567777777776653


Q ss_pred             ce---ehhhhhhc------ccccccceeeeeeeCCCCCccCCCCC---------------------CCCccccCCccchH
Q psy11822        109 LA---HLVDYAHC------NNVKASVQMMEVTRRSQYTGATAPPP---------------------PAQVLVPAPPGNVT  158 (229)
Q Consensus       109 ~~---~~~~~~~~------~~~~~~~lv~e~~~~~~l~~~~~~~~---------------------~~~~l~~~~~~~i~  158 (229)
                      ..   .++.++..      ......++||||+++++|..++....                     ....+++..+..++
T Consensus       236 ~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~  315 (507)
T PLN03224        236 AASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVM  315 (507)
T ss_pred             hhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHH
Confidence            22   22333221      11234689999999998765543211                     01123344567789


Q ss_pred             HHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-cc--ceeecccCCCCcccc
Q psy11822        159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-CN--TYLQSRYYRAPEIIL  227 (229)
Q Consensus       159 ~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-~~--~~~gt~~y~aPE~l~  227 (229)
                      .|++.||.|||+.+|+||||||+|||+    +.++.+||+|||++....... ..  ...+|+.|+|||++.
T Consensus       316 ~ql~~aL~~lH~~~ivHrDLKp~NILl----~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        316 RQVLTGLRKLHRIGIVHRDIKPENLLV----TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             HHHHHHHHHHHHCCeecCCCchHhEEE----CCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence            999999999999999999999999999    777899999999997654331 12  234478999999875

>KOG1006|consensus

Probab=99.89  E-value=1.9e-25  Score=171.62  Aligned_cols=161  Identities=24%  Similarity=0.230  Sum_probs=122.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccc-cccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGE-ALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~-~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.|++..++.+|+..|||.+......     ....++..|..+.. .-+.|||+  ++++.  ......+|+.||.|
T Consensus        75 G~fG~V~KM~hk~sg~~mAVKrIr~~n~~-----keq~rll~e~d~~mks~~cp~IV--kfyGa--~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   75 GAFGTVNKMLHKPSGKLMAVKRIRSNNIE-----KEQKRLLMEHDTVMKSSNCPNIV--KFYGA--LFSEGDCWICMELM  145 (361)
T ss_pred             CcchhhhhhhcCccCcEEEEEEeeeccch-----HHHHHHHHHHHHHHhhcCCcHHH--HHhhh--hhcCCceeeeHHHH
Confidence            88999999999999999999998765331     12235566666654 44788887  34433  33556689999999


Q ss_pred             eCCC--CCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        132 RRSQ--YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       132 ~~~~--l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +-+.  |....... ....+++.-...|....+.||.||.. ..|||||+||+|||+    +..|.+||||||.+..+..
T Consensus       146 d~SlDklYk~vy~v-q~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl----dr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  146 DISLDKLYKRVYSV-QKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL----DRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             hhhHHHHHHHHHHH-HhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE----ecCCCEeeecccchHhHHH
Confidence            8765  22221111 12358888888999999999999985 689999999999999    9999999999999988765


Q ss_pred             c-cccceeecccCCCCcccc
Q psy11822        209 A-VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~  227 (229)
                      + ..+...|...|||||-+.
T Consensus       221 SiAkT~daGCrpYmAPERi~  240 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERID  240 (361)
T ss_pred             HHHhhhccCCccccChhccC
Confidence            5 345678889999999874

>KOG1345|consensus

Probab=99.89  E-value=1.3e-23  Score=162.14  Aligned_cols=157  Identities=25%  Similarity=0.269  Sum_probs=118.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.+-+|.++.+...+|+|.++.+.       ..+..|.+|..---.| .|.||+  ..++.... +...+++++||+
T Consensus        35 G~FgkIlL~eHr~s~t~ivlKavp~p~-------tt~~dF~rEfhY~~~Ls~H~hIi--~tY~vaFq-t~d~YvF~qE~a  104 (378)
T KOG1345|consen   35 GRFGKILLAEHRQSKTRIVLKAVPRPQ-------TTQADFVREFHYSFFLSPHQHII--DTYEVAFQ-TSDAYVFVQEFA  104 (378)
T ss_pred             cceeeEEeeeccCCceEEEeeccCcch-------hhHHHHHHHhccceeeccchhhh--HHHHHHhh-cCceEEEeeccC
Confidence            889999999999999999999998753       3345678887665555 467765  22322221 223567899999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +.|+|..-...    ..+.+.-...++.|+++||.|||++++||||||.+|||+...+..  .+||||||+++..+....
T Consensus       105 P~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~--rvKlcDFG~t~k~g~tV~  178 (378)
T KOG1345|consen  105 PRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFY--RVKLCDFGLTRKVGTTVK  178 (378)
T ss_pred             ccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCcc--EEEeeecccccccCceeh
Confidence            99998765544    457777788999999999999999999999999999999876544  999999999987655321


Q ss_pred             cceeecccCCCCccc
Q psy11822        212 NTYLQSRYYRAPEII  226 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l  226 (229)
                       ..--+..|-|||++
T Consensus       179 -~~~~~~~y~~pe~~  192 (378)
T KOG1345|consen  179 -YLEYVNNYHAPELC  192 (378)
T ss_pred             -hhhhhcccCCcHHH
Confidence             11223357788865

>KOG4257|consensus

Probab=99.89  E-value=1.8e-24  Score=182.87  Aligned_cols=159  Identities=19%  Similarity=0.203  Sum_probs=123.0

Q ss_pred             CCceeeeeeecCCC--Cc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEG--GE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~--~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |.||.||.|.+..-  |+  .||||.-+...-     ....+.|..|+.+|+.+.||||+  .+++.+.   ....||||
T Consensus       400 GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t-----~d~tekflqEa~iMrnfdHphIi--kLIGv~~---e~P~Wivm  469 (974)
T KOG4257|consen  400 GQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT-----PDDTEKFLQEASIMRNFDHPHII--KLIGVCV---EQPMWIVM  469 (974)
T ss_pred             CcccceeeeEecccccCcceeeeeehhccCCC-----hhhHHHHHHHHHHHHhCCCcchh--heeeeee---ccceeEEE
Confidence            88999999986533  33  688887655211     12244678999999999999997  5565543   23579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |.++-|.|..++..+..  .|+......++.||+.||+|||+...|||||...|||+++    .--|||+|||+|+-+++
T Consensus       470 EL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS----p~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  470 ELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS----PQCVKLADFGLSRYLED  543 (974)
T ss_pred             ecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC----cceeeecccchhhhccc
Confidence            99999998877766443  4776777889999999999999999999999999999954    44999999999999877


Q ss_pred             ccc-cceee--cccCCCCcccc
Q psy11822        209 AVC-NTYLQ--SRYYRAPEIIL  227 (229)
Q Consensus       209 ~~~-~~~~g--t~~y~aPE~l~  227 (229)
                      ... ....|  ...|||||.++
T Consensus       544 ~~yYkaS~~kLPIKWmaPESIN  565 (974)
T KOG4257|consen  544 DAYYKASRGKLPIKWMAPESIN  565 (974)
T ss_pred             cchhhccccccceeecCccccc
Confidence            633 22233  34599999874

>KOG0199|consensus

Probab=99.89  E-value=8.8e-25  Score=186.64  Aligned_cols=167  Identities=20%  Similarity=0.234  Sum_probs=126.2

Q ss_pred             ceeecccCCceeeeeeecCC-CCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccc
Q psy11822         46 KYIFNCLDDIGQVNVPTDLE-GGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVK  122 (229)
Q Consensus        46 ~~~~~~~g~fg~Vy~a~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~  122 (229)
                      .|...+.|.||.|++|.|.. +|+  .||||.++.....     ...+.|.+|+..|.+|+|+++++++  +..-  + .
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-----~~mddflrEas~M~~L~H~hliRLy--GvVl--~-q  183 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-----AIMDDFLREASHMLKLQHPHLIRLY--GVVL--D-Q  183 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-----hhHHHHHHHHHHHHhccCcceeEEe--eeec--c-c
Confidence            33344448999999999875 344  6899998874332     1566889999999999999998544  3332  2 3


Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ...+|||.++.|+|...+.+ .....|.....+.++.||+.|+.||.++++|||||...|+|+..+    -.|||+||||
T Consensus       184 p~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasp----rtVKI~DFGL  258 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASP----RTVKICDFGL  258 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheeccc----ceeeeecccc
Confidence            46899999999995444444 223456667778999999999999999999999999999999554    4999999999


Q ss_pred             ceecCccccccee-----ecccCCCCcccc
Q psy11822        203 ASHVSKAVCNTYL-----QSRYYRAPEIIL  227 (229)
Q Consensus       203 a~~~~~~~~~~~~-----gt~~y~aPE~l~  227 (229)
                      .+.+.........     -...|.|||.|+
T Consensus       259 mRaLg~ned~Yvm~p~rkvPfAWCaPEsLr  288 (1039)
T KOG0199|consen  259 MRALGENEDMYVMAPQRKVPFAWCAPESLR  288 (1039)
T ss_pred             eeccCCCCcceEecCCCcCcccccCHhHhc
Confidence            9988664322121     224599999986

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.88  E-value=1.1e-23  Score=165.15  Aligned_cols=158  Identities=29%  Similarity=0.386  Sum_probs=128.2

Q ss_pred             CceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeeeC
Q psy11822         54 DIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRR  133 (229)
Q Consensus        54 ~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~  133 (229)
                      +||.||+|.+..+|+.+|+|++........     .+.+.+|++.++.++|+|++  .+++...  .....+++|||+++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~i~--~~~~~~~--~~~~~~l~~e~~~~   71 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-----RERILREISILKKLKHPNIV--RLYDVFE--DEDKLYLVMEYCDG   71 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-----HHHHHHHHHHHHhCCCCcHH--HHHhhee--eCCEEEEEEeCCCC
Confidence            589999999988899999999876422110     45678899999999999997  4554443  33557999999999


Q ss_pred             CCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-ccc
Q psy11822        134 SQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCN  212 (229)
Q Consensus       134 ~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~~  212 (229)
                      +++..++...   ..+++..+..++.+++.++.+||+.+++|+||+|+||++    +.++.++|+|||.+...... ...
T Consensus        72 ~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~----~~~~~~~l~d~~~~~~~~~~~~~~  144 (244)
T smart00220       72 GDLFDLLKKR---GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL----DEDGHVKLADFGLARQLDPGGLLT  144 (244)
T ss_pred             CCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE----CCCCcEEEccccceeeeccccccc
Confidence            8877765542   227778889999999999999999999999999999999    77789999999999887654 345


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      ...++..|+|||++.
T Consensus       145 ~~~~~~~~~~pE~~~  159 (244)
T smart00220      145 TFVGTPEYMAPEVLL  159 (244)
T ss_pred             cccCCcCCCCHHHHc
Confidence            667888999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.88  E-value=1.3e-23  Score=195.62  Aligned_cols=151  Identities=15%  Similarity=0.138  Sum_probs=117.8

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|++..++..||+|.++....          ....|++.+++++||||+  .+++++.  +....++||||
T Consensus       699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~l~~l~HpnIv--~~~~~~~--~~~~~~lv~Ey  764 (968)
T PLN00113        699 SRGKKGASYKGKSIKNGMQFVVKEINDVNS----------IPSSEIADMGKLQHPNIV--KLIGLCR--SEKGAYLIHEY  764 (968)
T ss_pred             ccCCCeeEEEEEECCCCcEEEEEEccCCcc----------ccHHHHHHHhhCCCCCcc--eEEEEEE--cCCCCEEEEeC
Confidence            348999999999988999999998764210          113457788999999998  4555543  33457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH---HCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK---QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH---~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +++|++..++..      +++..+..++.|++.||+|||   +.+|+||||||+||++    +..+..++. ||.+....
T Consensus       765 ~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~----~~~~~~~~~-~~~~~~~~  833 (968)
T PLN00113        765 IEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII----DGKDEPHLR-LSLPGLLC  833 (968)
T ss_pred             CCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE----CCCCceEEE-eccccccc
Confidence            999998877653      788888999999999999999   6699999999999999    666666665 66654432


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..  ....||+.|||||++.+
T Consensus       834 ~~--~~~~~t~~y~aPE~~~~  852 (968)
T PLN00113        834 TD--TKCFISSAYVAPETRET  852 (968)
T ss_pred             cC--CCccccccccCcccccC
Confidence            22  23478899999999865

>KOG0603|consensus

Probab=99.87  E-value=2.6e-23  Score=176.21  Aligned_cols=154  Identities=20%  Similarity=0.242  Sum_probs=122.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.|+.|..+.+..+++.+++|++.+.          ..+..+|+.++... .||||+..+  +.+.  .....|+|||.+
T Consensus       333 gs~s~~~~~~~~~t~~~~~vkii~~~----------~~~~~~e~~~~~~~~~h~niv~~~--~v~~--~~~~~~~v~e~l  398 (612)
T KOG0603|consen  333 GSFSAVKYCESSPTDQEPAVKIISKR----------ADDNQDEIPISLLVRDHPNIVKSH--DVYE--DGKEIYLVMELL  398 (612)
T ss_pred             CCccceeeeeccccccchhheecccc----------ccccccccchhhhhcCCCcceeec--ceec--CCceeeeeehhc
Confidence            88999999999999999999998764          11336788777665 899998544  3333  445689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      .++.+...+..   . +....++..|+.||+.|+.|||++|+|||||||+|||+.   +..++++|+|||.++.+.+. .
T Consensus       399 ~g~ell~ri~~---~-~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~---~~~g~lrltyFG~a~~~~~~-~  470 (612)
T KOG0603|consen  399 DGGELLRRIRS---K-PEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD---GSAGHLRLTYFGFWSELERS-C  470 (612)
T ss_pred             cccHHHHHHHh---c-chhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec---CCCCcEEEEEechhhhCchh-h
Confidence            99984444343   1 222267778999999999999999999999999999993   35679999999999988775 4


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      .+.+-|..|.|||++..
T Consensus       471 ~tp~~t~~y~APEvl~~  487 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAI  487 (612)
T ss_pred             cccchhhcccChhhhcc
Confidence            56788889999999863

>KOG0596|consensus

Probab=99.87  E-value=2.9e-23  Score=173.34  Aligned_cols=158  Identities=23%  Similarity=0.229  Sum_probs=119.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+-+.||++.. .+...||+|.+.....+    .+.++.+.+||..|.+| .|.+|+  .+++|.-  .+..+|+||||-
T Consensus       372 GGSSkV~kV~~-s~~~iyalkkv~~~~~D----~qtl~gy~nEI~lL~KLkg~~~II--qL~DYEv--~d~~lYmvmE~G  442 (677)
T KOG0596|consen  372 GGSSKVFKVLN-SDKQIYALKKVVLLEAD----NQTLDGYRNEIALLNKLKGHDKII--QLYDYEV--TDGYLYMVMECG  442 (677)
T ss_pred             CCcceeeeeec-CCCcchhhhHHHHhhcC----HHHHHHHHHHHHHHHHhcCCceEE--EEeeeec--cCceEEEEeecc
Confidence            67778999985 45567777766543222    34566789999999999 677776  6777765  356789999995


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~-  210 (229)
                      +.. |..++.+...  .++.-.++.+..|++.|+.+.|+.||||.||||.|+|+..     |.+||+|||.|..+..+. 
T Consensus       443 d~D-L~kiL~k~~~--~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-----G~LKLIDFGIA~aI~~DTT  514 (677)
T KOG0596|consen  443 DID-LNKILKKKKS--IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-----GRLKLIDFGIANAIQPDTT  514 (677)
T ss_pred             ccc-HHHHHHhccC--CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-----eeEEeeeechhcccCcccc
Confidence            544 4444444221  1222267888999999999999999999999999999843     499999999999886652 


Q ss_pred             ---ccceeecccCCCCcccc
Q psy11822        211 ---CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ---~~~~~gt~~y~aPE~l~  227 (229)
                         ...-+||+.|||||.+.
T Consensus       515 sI~kdsQvGT~NYMsPEAl~  534 (677)
T KOG0596|consen  515 SIVKDSQVGTVNYMSPEALT  534 (677)
T ss_pred             ceeeccccCcccccCHHHHh
Confidence               24579999999999874

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.86  E-value=1.7e-22  Score=157.03  Aligned_cols=159  Identities=28%  Similarity=0.342  Sum_probs=127.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|++|.||+|.+..+++.+|+|.+......     ...+.+.+|++.++.++|+|++  .++++..  .....++++||+
T Consensus         9 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~i~--~~~~~~~--~~~~~~~v~e~~   79 (225)
T smart00221        9 EGAFGKVYLARDKGTGELVAVKVLKKEKTE-----KQREEFLREIRILKKLKHPNIV--KLYGVFE--DPEPLYLVMEYC   79 (225)
T ss_pred             cCCCeEEEEEEEcCCCcEEEEEeeccccch-----HHHHHHHHHHHHHHhCCCCChh--hheeeee--cCCceEEEEecc
Confidence            388999999999888999999998764321     1344668899999999999987  4444433  234578999999


Q ss_pred             eCCCCCccCCCCCCCCc-cccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQV-LVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~-l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++..+....   .. +++..+..++.+++.++.+||+.+++|+|++|+||++    +.++.++|+|||.+...... 
T Consensus        80 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v----~~~~~~~l~d~g~~~~~~~~~  152 (225)
T smart00221       80 EGGDLFDYLRKK---GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL----GMDGLVKLADFGLARFIHRDL  152 (225)
T ss_pred             CCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeeCceeeEecCcc
Confidence            998877765542   22 6777788999999999999999999999999999999    76789999999999877553 


Q ss_pred             --cccceeecccCCCCccc
Q psy11822        210 --VCNTYLQSRYYRAPEII  226 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l  226 (229)
                        ......++..|++||.+
T Consensus       153 ~~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221      153 AALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             cccccceeccCCcCCHhHh
Confidence              33456788899999987

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=2.3e-22  Score=153.92  Aligned_cols=162  Identities=27%  Similarity=0.334  Sum_probs=129.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.+|.||++.+..+++.+++|++.......     ..+.+.+|+..++.+.|+++..  +..+..  .....+++||++
T Consensus         3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~--~~~~~~--~~~~~~~~~e~~   73 (215)
T cd00180           3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-----LLEELLREIEILKKLNHPNIVK--LYGVFE--DENHLYLVMEYC   73 (215)
T ss_pred             cCCceEEEEEEecCCCcEEEEEEeccccchh-----HHHHHHHHHHHHHhcCCCCeee--Eeeeee--cCCeEEEEEecC
Confidence            4889999999998889999999987643211     2346789999999999998863  443333  224578999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++++..++....  ..++...+..++.++++++.+||+.|++|+||+|+||++    +. .+.++|+|||.+.......
T Consensus        74 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~----~~~~~~~~l~d~~~~~~~~~~~  147 (215)
T cd00180          74 EGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL----DSDNGKVKLADFGLSKLLTSDK  147 (215)
T ss_pred             CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE----eCCCCcEEEecCCceEEccCCc
Confidence            9888777755421  247778889999999999999999999999999999999    65 6799999999998776543


Q ss_pred             --ccceeecccCCCCccccC
Q psy11822        211 --CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 --~~~~~gt~~y~aPE~l~~  228 (229)
                        .....+...|++||.+.+
T Consensus       148 ~~~~~~~~~~~~~~pe~~~~  167 (215)
T cd00180         148 SLLKTIVGTPAYMAPEVLLG  167 (215)
T ss_pred             chhhcccCCCCccChhHhcc
Confidence              455677888999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167|consensus

Probab=99.86  E-value=6.8e-23  Score=166.09  Aligned_cols=131  Identities=21%  Similarity=0.237  Sum_probs=108.2

Q ss_pred             CCceeeeeeecCC---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLE---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+|++||+|++..   .++.||+|.+...        ....++.+|++.|..+ .+.||+  .+.+.+.  +...+.+|+
T Consensus        47 GsFssv~~a~~~~~~~~~~~valk~i~~t--------s~p~ri~~El~~L~~~gG~~ni~--~~~~~~r--nnd~v~ivl  114 (418)
T KOG1167|consen   47 GSFSSVYKATDIEQDTKRRYVALKAIYRT--------SSPSRILNELEMLYRLGGSDNII--KLNGCFR--NNDQVAIVL  114 (418)
T ss_pred             cchhhhhhhhHhhhccccceEeeeecccc--------cCchHHHHHHHHHHHhccchhhh--cchhhhc--cCCeeEEEe
Confidence            9999999999887   7899999988763        3344678999999888 677775  4444433  445689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      ||++...+..+...      ++..++..+++.++.||+++|++|||||||||+|+|...   ..+.-.|+|||+|.
T Consensus       115 p~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~---~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  115 PYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR---RTQRGVLVDFGLAQ  181 (418)
T ss_pred             cccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc---ccCCceEEechhHH
Confidence            99999998888665      777888999999999999999999999999999999943   33477899999986

>smart00090 RIO RIO-like kinase

Probab=99.85  E-value=4.1e-22  Score=156.82  Aligned_cols=143  Identities=19%  Similarity=0.156  Sum_probs=103.9

Q ss_pred             CCceeeeeee-cCCCCcEEEEehhhHHHHHHH---------H---------HhhhhhhhhccccccccccCccccceehh
Q psy11822         53 DDIGQVNVPT-DLEGGELLAEKADRREFIDLL---------K---------RMLTMDQVERRITPGEALNHAFVTLAHLV  113 (229)
Q Consensus        53 g~fg~Vy~a~-~~~~~~~vaiK~~~~~~~~~~---------~---------~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~  113 (229)
                      |+||.||+|. +..+|+.||+|+++.......         .         .......+.+|+..+..+.+.++..+..+
T Consensus        39 G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~  118 (237)
T smart00090       39 GKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPI  118 (237)
T ss_pred             CcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence            8999999999 667899999999875321000         0         00011235789999999976555433433


Q ss_pred             hhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC-CccccCCCCCeeeeCCCCCC
Q psy11822        114 DYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG-LIHADLKPENIMLVDPVRQP  192 (229)
Q Consensus       114 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~-iiHrDlkp~Nil~~~~~~~~  192 (229)
                      .+   .   ..++||||++++++......   ...+...++..++.|++.+|.+||+.| ++||||||+||++    + .
T Consensus       119 ~~---~---~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli----~-~  184 (237)
T smart00090      119 AW---R---RNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV----H-D  184 (237)
T ss_pred             Ee---c---CceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE----E-C
Confidence            22   1   24799999999886554322   123445556789999999999999999 9999999999999    5 5


Q ss_pred             ccEEEeecCcceecCcc
Q psy11822        193 YRVKVIDFGSASHVSKA  209 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~  209 (229)
                      +.++|+|||.|.....+
T Consensus       185 ~~i~LiDFg~a~~~~~~  201 (237)
T smart00090      185 GKVVIIDVSQSVELDHP  201 (237)
T ss_pred             CCEEEEEChhhhccCCc
Confidence            68999999999866554

>KOG0670|consensus

Probab=99.85  E-value=4e-22  Score=165.64  Aligned_cols=162  Identities=28%  Similarity=0.291  Sum_probs=124.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccc----cceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFV----TLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni----~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |-|+.|.+|.+...|..||||++........       .=.+|+++|++|+..--    ..++++..|.  ....+++|+
T Consensus       443 GvFs~Vvra~D~~r~~~vAiKIIRnNE~M~K-------tGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--hknHLClVF  513 (752)
T KOG0670|consen  443 GVFSTVVRARDQARGQEVAIKIIRNNEVMHK-------TGLKELEILKKLNDADPEDKFHCLRLFRHFK--HKNHLCLVF  513 (752)
T ss_pred             ceeeeeeeccccCCCCeeEEEEeecchHHhh-------hhhHHHHHHHHhhccCchhhhHHHHHHHHhh--hcceeEEEe
Confidence            7799999999999999999999987433211       11678999998842210    0113333333  445789999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~  207 (229)
                      |-+..++ ...+.+.+....|....+..++.|+.-||..|-.+||+|.||||+|||+    ++ ...+||||||.|....
T Consensus       514 E~LslNL-RevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLV----NE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  514 EPLSLNL-REVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILV----NESKNILKLCDFGSASFAS  588 (752)
T ss_pred             hhhhchH-HHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEe----ccCcceeeeccCccccccc
Confidence            9988776 2222333333568888889999999999999999999999999999999    44 4589999999999888


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+.+.-+.-|.|||+++|
T Consensus       589 eneitPYLVSRFYRaPEIiLG  609 (752)
T KOG0670|consen  589 ENEITPYLVSRFYRAPEIILG  609 (752)
T ss_pred             cccccHHHHHHhccCcceeec
Confidence            877777888888999999987

>KOG0200|consensus

Probab=99.84  E-value=1.1e-21  Score=173.41  Aligned_cols=165  Identities=15%  Similarity=0.137  Sum_probs=123.5

Q ss_pred             ccCCceeeeeeecC---C----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccc
Q psy11822         51 CLDDIGQVNVPTDL---E----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVK  122 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~---~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~  122 (229)
                      +.|.||.|++|...   .    ....||||.++.....     ...+.+..|+.+|+.+ .|+||+  .+++...  ...
T Consensus       305 g~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-----~~~~~~~~El~~m~~~g~H~niv--~llG~~t--~~~  375 (609)
T KOG0200|consen  305 GEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-----SEKKDLMSELNVLKELGKHPNIV--NLLGACT--QDG  375 (609)
T ss_pred             ecccccceEeEEEeecccccccceEEEEEEecccccCc-----HHHHHHHHHHHHHHHhcCCcchh--hheeeec--cCC
Confidence            34899999999633   1    1458999998764322     3345679999999998 699997  4554433  356


Q ss_pred             ccceeeeeeeCCCCCccCCCCC-----------CC--CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPP-----------PA--QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV  189 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~-----------~~--~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~  189 (229)
                      ..++|+||+..|+|..++....           +.  ..++..+.+.++.||+.|++||++..+|||||...|||+    
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi----  451 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI----  451 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe----
Confidence            7899999999999655544422           11  127777788999999999999999999999999999999    


Q ss_pred             CCCccEEEeecCcceecCcccccc---eee--cccCCCCccccC
Q psy11822        190 RQPYRVKVIDFGSASHVSKAVCNT---YLQ--SRYYRAPEIILG  228 (229)
Q Consensus       190 ~~~~~~kl~DFg~a~~~~~~~~~~---~~g--t~~y~aPE~l~~  228 (229)
                      ..+..+||+|||+|+.........   ..|  ...|||||.+.+
T Consensus       452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~  495 (609)
T KOG0200|consen  452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD  495 (609)
T ss_pred             cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc
Confidence            777799999999999765542222   222  234999999864

>KOG1025|consensus

Probab=99.83  E-value=3.4e-22  Score=173.47  Aligned_cols=162  Identities=17%  Similarity=0.086  Sum_probs=122.3

Q ss_pred             cccCCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         50 NCLDDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .+.|.||+||+|.+...|+    +||+|++.....     ...-..+..|+.+|.++.|||++  +++.+...+.   ..
T Consensus       704 LGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-----~~~s~e~LdeAl~masldHpnl~--RLLgvc~~s~---~q  773 (1177)
T KOG1025|consen  704 LGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-----PKASIELLDEALRMASLDHPNLL--RLLGVCMLST---LQ  773 (1177)
T ss_pred             eccccceeEEeeeEecCCceecceeEEEEeeccCC-----chhhHHHHHHHHHHhcCCCchHH--HHhhhcccch---HH
Confidence            3348899999999887666    788998765321     22334668899999999999997  5655554333   67


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ||++|++.|.|.++.+..  ...+-....+.|..||++|+.|||.+.++||||...|||+..    ...+||.|||+++.
T Consensus       774 lvtq~mP~G~LlDyvr~h--r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks----P~hvkitdfgla~l  847 (1177)
T KOG1025|consen  774 LVTQLMPLGCLLDYVREH--RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS----PNHVKITDFGLAKL  847 (1177)
T ss_pred             HHHHhcccchHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC----CCeEEEEecchhhc
Confidence            999999999966654442  234666677899999999999999999999999999999944    45999999999999


Q ss_pred             cCcc--cccceee--cccCCCCcccc
Q psy11822        206 VSKA--VCNTYLQ--SRYYRAPEIIL  227 (229)
Q Consensus       206 ~~~~--~~~~~~g--t~~y~aPE~l~  227 (229)
                      +.++  ......|  .+.|||-|.++
T Consensus       848 l~~d~~ey~~~~gK~pikwmale~i~  873 (1177)
T KOG1025|consen  848 LAPDEKEYSAPGGKVPIKWMALESIR  873 (1177)
T ss_pred             cCcccccccccccccCcHHHHHHHhh
Confidence            8765  2223333  34577777654

>PRK10345 hypothetical protein; Provisional

Probab=99.83  E-value=4.3e-21  Score=147.87  Aligned_cols=138  Identities=12%  Similarity=-0.034  Sum_probs=98.1

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-----cCccccceehhhhhhcccc-cc-
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-----NHAFVTLAHLVDYAHCNNV-KA-  123 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~ni~~~~~~~~~~~~~~-~~-  123 (229)
                      +.|+||.||.  +..++.. +||++.....      ...+.+.+|+..++.+     .||||+  ..+++++.... .. 
T Consensus        11 G~G~~~~Vy~--hp~~~~k-~IKv~~~~~~------~~~~~~~rEi~~l~~L~~~~~~h~nIv--r~yg~~et~~g~g~v   79 (210)
T PRK10345         11 GTGRHRKCYA--HPEDAQR-CIKIVYHRGD------GGDKEIRRELKYYAHLSRRLIDWSGIP--RYYGTVETDCGTGYV   79 (210)
T ss_pred             cCCCceEEEE--CCCCcCe-EEEEEecccc------chHHHHHHHHHHHHHhhccCCCCcccc--eeeEEEEeCCCCeEE
Confidence            3499999996  6666666 6998765311      1234568999999999     579987  45555543321 22 


Q ss_pred             cceeeee--eeCCCCCccCCCCCCCCccccCCccchHHHHHHHH-HHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        124 SVQMMEV--TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTAL-LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       124 ~~lv~e~--~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl-~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      +.+||||  +.+++|..++..    ..+++.  ..++.|++.++ +|||+++|+||||||+|||+....+.++.++|+||
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            3378999  457888888755    234444  46788999888 99999999999999999999765445568999995


Q ss_pred             Cccee
Q psy11822        201 GSASH  205 (229)
Q Consensus       201 g~a~~  205 (229)
                      +.+..
T Consensus       154 ~G~~~  158 (210)
T PRK10345        154 IGEST  158 (210)
T ss_pred             CCCcc
Confidence            44433

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.83  E-value=1.4e-20  Score=145.91  Aligned_cols=137  Identities=11%  Similarity=0.086  Sum_probs=100.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhh---hhhhhhccccccccccCccccceehhhhhhcc----cccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRML---TMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~---~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~  125 (229)
                      |+||.||++.+  ++..+|+|++.+..........   ..+.+.+|++.+.++.|++|..+..+......    -....+
T Consensus        42 ~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~  119 (232)
T PRK10359         42 IDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYI  119 (232)
T ss_pred             CCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeE
Confidence            89999999765  4778999999865433222111   12336899999999999999854433111110    012468


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ++|||++|.++.++..       +++    ....+++.+|..||+.|++|||+||+||++    +.++ ++|+|||.++.
T Consensus       120 lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili----~~~g-i~liDfg~~~~  183 (232)
T PRK10359        120 MLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV----SKNG-LRIIDLSGKRC  183 (232)
T ss_pred             EEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE----eCCC-EEEEECCCccc
Confidence            9999999998766522       221    357799999999999999999999999999    6666 99999998876


Q ss_pred             cC
Q psy11822        206 VS  207 (229)
Q Consensus       206 ~~  207 (229)
                      ..
T Consensus       184 ~~  185 (232)
T PRK10359        184 TA  185 (232)
T ss_pred             cc
Confidence            64

>KOG1163|consensus

Probab=99.82  E-value=5e-21  Score=145.68  Aligned_cols=155  Identities=17%  Similarity=0.183  Sum_probs=114.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.+|.|....+|+.||||+-...        ....++..|.++.+.+++. .|  +++..|..  +...-.+||+.+
T Consensus        26 GSFGdIy~~~~i~~ge~VAiK~Es~~--------a~hpqL~yEskvY~iL~~g~Gi--P~i~~y~~--e~~ynvlVMdLL   93 (341)
T KOG1163|consen   26 GSFGDIYLGISITSGEEVAIKLESSK--------AKHPQLLYESKVYRILQGGVGI--PHIRHYGT--EKDYNVLVMDLL   93 (341)
T ss_pred             CchhheeeeeeccCCceEEEEeeccc--------CCCcchhHHHHHHHHhccCCCC--chhhhhcc--ccccceeeeecc
Confidence            89999999999999999999985431        1122557778787777543 22  34444433  334457999998


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ....-+.+..-   ...++..+++.++.|++.-++|+|.++.|||||||+|+|.+-. .....+.|+|||+|+.+-+.  
T Consensus        94 GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg-rh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   94 GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG-RHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc-cccceEEEEeccchhhhccccc
Confidence            87762222111   2358888999999999999999999999999999999999655 44568999999999987442  


Q ss_pred             -------cccceeecccCCCC
Q psy11822        210 -------VCNTYLQSRYYRAP  223 (229)
Q Consensus       210 -------~~~~~~gt~~y~aP  223 (229)
                             ......||..|.+-
T Consensus       170 ~~HIpyre~r~ltGTaRYASi  190 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASI  190 (341)
T ss_pred             cccCccccCCccceeeeehhh
Confidence                   22457888888764

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=4.7e-20  Score=142.86  Aligned_cols=138  Identities=16%  Similarity=0.102  Sum_probs=103.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHH--HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFI--DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|.+|.||+|.+  +|..+++|+......  ...........+.+|+..+..+.|+++..+..+..    .....+++||
T Consensus         6 ~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~~~lv~e   79 (211)
T PRK14879          6 RGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV----DPENFIIVME   79 (211)
T ss_pred             cCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE----eCCCCEEEEE
Confidence            499999999987  578899997543211  01111222345688999999999998875554422    2234689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |++|+++..+...      ... +...++.+++.+|.+||+.+++|+|++|+|||+    + .+.++|+|||++....
T Consensus        80 ~~~G~~L~~~~~~------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~----~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         80 YIEGEPLKDLINS------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMIL----S-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             EeCCcCHHHHHHh------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEE----E-CCCEEEEECCcccCCC
Confidence            9999998766543      111 667899999999999999999999999999999    5 5689999999998654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.80  E-value=1.4e-19  Score=139.08  Aligned_cols=138  Identities=20%  Similarity=0.266  Sum_probs=100.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHH--HHH--------------hhhhhhhhccccccccccCccccceehhhh
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDL--LKR--------------MLTMDQVERRITPGEALNHAFVTLAHLVDY  115 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~--------------~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~  115 (229)
                      .|+||.||+|.+. +|+.||||+++......  ...              ......+.+|+..+..+.|+++..+..+..
T Consensus        25 ~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~  103 (198)
T cd05144          25 VGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDW  103 (198)
T ss_pred             cCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeec
Confidence            3999999999874 79999999865421000  000              001123577888888887776533333221


Q ss_pred             hhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccE
Q psy11822        116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       116 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                            ...++||||++++++..+...         .....++.+++.++.++|+.|++||||||+||++    +.++.+
T Consensus       104 ------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill----~~~~~~  164 (198)
T cd05144         104 ------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV----DDDEKI  164 (198)
T ss_pred             ------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE----cCCCcE
Confidence                  224899999999987655321         3446789999999999999999999999999999    777899


Q ss_pred             EEeecCcceecCcc
Q psy11822        196 KVIDFGSASHVSKA  209 (229)
Q Consensus       196 kl~DFg~a~~~~~~  209 (229)
                      +|+|||.+......
T Consensus       165 ~liDfg~~~~~~~~  178 (198)
T cd05144         165 YIIDWPQMVSTDHP  178 (198)
T ss_pred             EEEECCccccCCCc
Confidence            99999999776553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1290|consensus

Probab=99.79  E-value=4e-20  Score=152.68  Aligned_cols=141  Identities=21%  Similarity=0.147  Sum_probs=108.4

Q ss_pred             cCcccccceeeccc--CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-----Ccccc-ce
Q psy11822         39 IKSKEARKYIFNCL--DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-----HAFVT-LA  110 (229)
Q Consensus        39 ~~~~~~~~~~~~~~--g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h~ni~-~~  110 (229)
                      ...+.++|-++.++  |+|++||+|.|..+.+.||+|+.+....       ..+....||++|++++     |++-- ++
T Consensus        73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-------YtEaAlDEIklL~~v~~~Dp~~~~~~~VV  145 (590)
T KOG1290|consen   73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-------YTEAALDEIKLLQQVREGDPNDPGKKCVV  145 (590)
T ss_pred             ccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-------HHHHHHHHHHHHHHHHhcCCCCCCCceee
Confidence            33344556566666  8999999999999999999999887422       2334478899988873     33221 24


Q ss_pred             ehhhhhh--cccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeC
Q psy11822        111 HLVDYAH--CNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVD  187 (229)
Q Consensus       111 ~~~~~~~--~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~  187 (229)
                      .+++.|.  +.+...+++|+|++...+|..+.....  +.++..-++.|++||+.||.|||. +||||-||||+|||+..
T Consensus       146 ~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  146 QLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             eeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence            6677664  455678899999999998888766644  458888899999999999999995 79999999999999965


Q ss_pred             C
Q psy11822        188 P  188 (229)
Q Consensus       188 ~  188 (229)
                      .
T Consensus       224 ~  224 (590)
T KOG1290|consen  224 T  224 (590)
T ss_pred             c
Confidence            4

>KOG1164|consensus

Probab=99.79  E-value=5.7e-20  Score=151.35  Aligned_cols=165  Identities=20%  Similarity=0.253  Sum_probs=115.1

Q ss_pred             CCceeeeeeecCCCC-cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC----ccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGG-ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH----AFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h----~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||.|.+..++ ..+|+|+......     . ....+..|..++..+..    +++  +.+++.+. ......|+|
T Consensus        29 G~fG~V~~v~~~~~~~~~~a~K~e~~~~~-----~-~~~~l~~E~~vl~~l~~~~~~~~~--~~~~~~G~-~~~~~~~iV   99 (322)
T KOG1164|consen   29 GGFGAVYLVSDKSEKNKEYAKKLEKKELG-----S-KPSVLKIEIQVLKKLEKKNGPSHF--PKLLDHGR-STEDFNFIV   99 (322)
T ss_pred             cCCceEEEEEecCCCCeeEEEEEEEeccc-----C-CCccchhHHHHHHHHhhhcCCCCC--CEEEEecc-CCCceeEEE
Confidence            899999999987764 6899998665311     1 11145677788877763    122  23443332 233456899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEeecCcce--
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSAS--  204 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~--  204 (229)
                      |+.+..+..+ +..... .+.++..++..++.|++.+|.+||+.|++||||||+|++++... .....+.|.|||+|+  
T Consensus       100 M~l~G~sL~d-l~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~  177 (322)
T KOG1164|consen  100 MSLLGPSLED-LRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF  177 (322)
T ss_pred             EeccCccHHH-HHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence            9997766533 322222 45799999999999999999999999999999999999996653 222589999999999  


Q ss_pred             ecCcc--------c--ccceeecccCCCCccccC
Q psy11822        205 HVSKA--------V--CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~--------~--~~~~~gt~~y~aPE~l~~  228 (229)
                      .+...        .  .....||..|+++.+-.+
T Consensus       178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~  211 (322)
T KOG1164|consen  178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG  211 (322)
T ss_pred             cccCCCCcccccCCCCccCCCCccccccHHHhCC
Confidence            42111        1  123569999999886554

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.79  E-value=7.5e-20  Score=140.53  Aligned_cols=136  Identities=15%  Similarity=0.125  Sum_probs=101.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHH--HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFI--DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+  +|..+++|+......  ..........++.+|+++++.+.|+++..+.++..    .....++|||
T Consensus         4 ~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~~~lv~e   77 (199)
T TIGR03724         4 KGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV----DPDNKTIVME   77 (199)
T ss_pred             CCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE----ECCCCEEEEE
Confidence            489999999985  478899998543211  01112223356788999999999888765554433    2234589999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |++|+++......   . ..      .++.|++.+|.+||+.|++|+|++|+||++    + .+.++++|||++.....
T Consensus        78 ~~~g~~l~~~~~~---~-~~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~----~-~~~~~liDfg~a~~~~~  141 (199)
T TIGR03724        78 YIEGKPLKDVIEE---G-ND------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV----R-DDKLYLIDFGLGKYSDE  141 (199)
T ss_pred             EECCccHHHHHhh---c-HH------HHHHHHHHHHHHHHHCCeecCCCCcceEEE----E-CCcEEEEECCCCcCCCc
Confidence            9999987665443   1 11      789999999999999999999999999999    5 56999999999887543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1165|consensus

Probab=99.79  E-value=5.5e-20  Score=145.76  Aligned_cols=157  Identities=16%  Similarity=0.210  Sum_probs=119.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.||.++.|+...++++||||.-+..+        ...++..|-+..+.| ..++|.  +++.+..++  ..-.+|||.+
T Consensus        39 GsFG~lf~G~Nl~nne~VAIKfEPrkS--------~APQLrdEYr~YKlL~g~~GIP--~vYYFGqeG--~~NiLVidLL  106 (449)
T KOG1165|consen   39 GSFGVLFLGKNLYNNEPVAIKFEPRKS--------EAPQLRDEYRTYKLLGGTEGIP--QVYYFGQEG--KYNILVIDLL  106 (449)
T ss_pred             CcceeeecccccccCceEEEEeccccC--------CcchHHHHHHHHHHHcCCCCCC--ceeeecccc--chhhhhhhhh
Confidence            999999999999999999999865521        122456677777776 455553  555444433  3447899998


Q ss_pred             eCCC--CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCc
Q psy11822        132 RRSQ--YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       132 ~~~~--l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~  208 (229)
                      ...+  |-++..     ++|+..+++.++.|++.-++|+|++.+|.|||||+|+||+.+.+. ...+-|+|||+|+.+.+
T Consensus       107 GPSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  107 GPSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             CcCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence            8776  222322     369999999999999999999999999999999999999886543 35889999999998865


Q ss_pred             cc---------ccceeecccCCCCccc
Q psy11822        209 AV---------CNTYLQSRYYRAPEII  226 (229)
Q Consensus       209 ~~---------~~~~~gt~~y~aPE~l  226 (229)
                      +.         ..+..||..||+--.-
T Consensus       182 p~TkqHIPYrE~KSLsGTARYMSINTH  208 (449)
T KOG1165|consen  182 PKTKQHIPYREHKSLSGTARYMSINTH  208 (449)
T ss_pred             ccccccCccccccccccceeeeEeecc
Confidence            42         2457899999975443

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=2.8e-19  Score=136.15  Aligned_cols=131  Identities=15%  Similarity=0.082  Sum_probs=96.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-ccccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|.||+||.+..  .+.+++.+.+......  ...-+...+.+|+++|+++.| +++.  .++++      ...+++|||
T Consensus        12 ~~~f~~v~~~~~--~~~k~~~~~l~~~~~~--~~~~~~~l~~rE~~iL~~L~~~~~vP--~ll~~------~~~~lvmey   79 (218)
T PRK12274         12 SDTFGRILLVRG--GERKFVRRDLSAAPWW--LRGVAWWLARREALALRQLDGLPRTP--RLLHW------DGRHLDRSY   79 (218)
T ss_pred             CCCcceEEEeec--CCceeeecccccchhh--hhhHHHHHHHHHHHHHHhcCCCCCCC--EEEEE------cCEEEEEee
Confidence            489999998875  5889998876653221  111122256899999999954 5554  44433      225899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccC-CCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADL-KPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDl-kp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +.|.+|......          ....++.|++.+|.++|++||+|||| ||+|||+    +.++.++|+|||+|.....
T Consensus        80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv----~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV----QEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE----cCCCCEEEEECCCceecCC
Confidence            999887543211          11357899999999999999999999 7999999    7778999999999986543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.77  E-value=3.7e-19  Score=155.80  Aligned_cols=135  Identities=17%  Similarity=0.175  Sum_probs=96.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehh-hHHHH-HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKAD-RREFI-DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~-~~~~~-~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|.||.||+|.+..  ..+++|+. .+... .........+.+.+|+++++.++|+++..+..+..    .....++|||
T Consensus       343 ~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~~~lv~E  416 (535)
T PRK09605        343 KGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV----DPEEKTIVME  416 (535)
T ss_pred             cCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE----eCCCCEEEEE
Confidence            49999999998753  33444431 11111 11111223346789999999999999875443322    2234589999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |++++++.....           ....++.|++.+|.+||+.+++||||||+||++    + ++.++|+|||+++....
T Consensus       417 ~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~-~~~~~liDFGla~~~~~  479 (535)
T PRK09605        417 YIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----R-DDRLYLIDFGLGKYSDL  479 (535)
T ss_pred             ecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----E-CCcEEEEeCcccccCCc
Confidence            999999766543           235789999999999999999999999999999    3 24899999999987643

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.76  E-value=7.8e-19  Score=133.50  Aligned_cols=140  Identities=24%  Similarity=0.225  Sum_probs=92.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhh------------------hhhhccccccccccCccccceehh
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTM------------------DQVERRITPGEALNHAFVTLAHLV  113 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~------------------~~~~~Ei~~l~~l~h~ni~~~~~~  113 (229)
                      .|+||.||+|.+. +|+.||||++..............                  .....|...+..+.+..+..+..+
T Consensus         7 ~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~   85 (187)
T cd05119           7 TGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPI   85 (187)
T ss_pred             cccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceE
Confidence            4999999999976 899999998765321111100000                  001234444444433332211211


Q ss_pred             hhhhcccccccceeeeeeeCCCCCcc-CCCCCCCCcccc-CCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCC
Q psy11822        114 DYAHCNNVKASVQMMEVTRRSQYTGA-TAPPPPAQVLVP-APPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       114 ~~~~~~~~~~~~lv~e~~~~~~l~~~-~~~~~~~~~l~~-~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~  190 (229)
                      .   .   ...++||||++++.+... +..      ... .++..++.+++.++.++|. .+|+||||||+||++    +
T Consensus        86 ~---~---~~~~lv~e~~~g~~~~~~~l~~------~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili----~  149 (187)
T cd05119          86 D---L---NRHVLVMEFIGGDGIPAPRLKD------VRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILV----D  149 (187)
T ss_pred             e---c---CCCEEEEEEeCCCCccChhhhh------hhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE----E
Confidence            1   1   124899999999663221 111      111 6678899999999999999 999999999999999    5


Q ss_pred             CCccEEEeecCcceecCcc
Q psy11822        191 QPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~  209 (229)
                       ++.++|+|||.+.....+
T Consensus       150 -~~~~~liDfg~a~~~~~~  167 (187)
T cd05119         150 -DGKVYIIDVPQAVEIDHP  167 (187)
T ss_pred             -CCcEEEEECcccccccCc
Confidence             679999999999866543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166|consensus

Probab=99.76  E-value=1.4e-18  Score=156.41  Aligned_cols=162  Identities=22%  Similarity=0.266  Sum_probs=115.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||.|++.. |+.||+|+-++....+   .....++...++  -.+.+. |.  ++.......+  ..++|+||.+
T Consensus       709 g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk--~~~~~~-~~--~~~~a~~~~~--~S~lv~ey~~  777 (974)
T KOG1166|consen  709 GSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLK--PQMLPS-IM--HISSAHVFQN--ASVLVSEYSP  777 (974)
T ss_pred             ccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhc--hhhhcc-hH--HHHHHHccCC--cceeeeeccc
Confidence            8999999999876 9999999977643221   111112222222  111122 21  3333333332  2489999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC---CCCCccEEEeecCcceecC--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP---VRQPYRVKVIDFGSASHVS--  207 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~---~~~~~~~kl~DFg~a~~~~--  207 (229)
                      .|+|..++..   .+.+++..++.|+.|++.-++.||..+|||+||||+|+|+..+   +....-++|+|||.|..+.  
T Consensus       778 ~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf  854 (974)
T KOG1166|consen  778 YGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF  854 (974)
T ss_pred             cccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEc
Confidence            9997666664   5679999999999999999999999999999999999999753   2335689999999997662  


Q ss_pred             -cc-cccceeecccCCCCccccC
Q psy11822        208 -KA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 -~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                       +. .....++|-.+-++|++.|
T Consensus       855 p~~~~F~~~~~td~f~C~EM~~g  877 (974)
T KOG1166|consen  855 PDGTKFKAVWHTDLFDCIEMREG  877 (974)
T ss_pred             CCCcEEeeeeccccchhHHHhcC
Confidence             22 4456788888999998876

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.75  E-value=7.9e-19  Score=142.54  Aligned_cols=163  Identities=28%  Similarity=0.345  Sum_probs=125.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|.||.||++.+.   ..+|+|.+........   .....+.+|+.+++.+.|+ +++  .+.+.+.  .....++++++
T Consensus        10 ~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~i~--~~~~~~~--~~~~~~~~~~~   79 (384)
T COG0515          10 EGSFGEVYLARDR---KLVALKVLAKKLESKS---KEVERFLREIQILASLNHPPNIV--KLYDFFQ--DEGSLYLVMEY   79 (384)
T ss_pred             CCCCeEEEEEEec---cEEEEEeechhhccch---hHHHHHHHHHHHHHHccCCccee--eEEEEEe--cCCEEEEEEec
Confidence            4889999999987   8899999887543211   2345678899999999888 576  3333332  22336899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~~~~  209 (229)
                      +.++.+..+.........++...+..++.|++.++.|+|+.+++|||+||+||++    +... .++++|||.++.....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~----~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL----DRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----cCCCCeEEEeccCcceecCCC
Confidence            9999977554431111257777889999999999999999999999999999999    6666 7999999999866443


Q ss_pred             --------cccceeecccCCCCccccC
Q psy11822        210 --------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --------~~~~~~gt~~y~aPE~l~~  228 (229)
                              ......||..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             CccccccccccccccccccCCHHHhcC
Confidence                    2367899999999998865

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.74  E-value=2.2e-18  Score=135.88  Aligned_cols=149  Identities=13%  Similarity=0.076  Sum_probs=103.3

Q ss_pred             cceeecccCCceeeeeeecCCCCcEEEEehhhHHHH-----H-HH-HHhhhhhhhhccccccccccCccccceehhhhhh
Q psy11822         45 RKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFI-----D-LL-KRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH  117 (229)
Q Consensus        45 ~~~~~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~-----~-~~-~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~  117 (229)
                      ..+++...|+.|+||.+...  +..+|+|.+.....     . .. ........+.+|+.++..+.|+++..+..+.+..
T Consensus        35 ~~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~  112 (239)
T PRK01723         35 QARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV  112 (239)
T ss_pred             cCceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence            34555556889999999864  78899987643111     0 00 0012234668899999999998875444444332


Q ss_pred             cccc--cccceeeeeeeC-CCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        118 CNNV--KASVQMMEVTRR-SQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       118 ~~~~--~~~~lv~e~~~~-~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      ....  ...++|||++++ .++..+...    ..+++    ..+.|++.+|.+||++||+||||||+|||+    +.++.
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~----~~~~~i~~~l~~lH~~GI~HrDlkp~NILv----~~~~~  180 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQE----APLSE----EQWQAIGQLIARFHDAGVYHADLNAHNILL----DPDGK  180 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhc----CCCCH----HHHHHHHHHHHHHHHCCCCCCCCCchhEEE----cCCCC
Confidence            2111  122599999997 466655443    12332    357899999999999999999999999999    66668


Q ss_pred             EEEeecCcceecC
Q psy11822        195 VKVIDFGSASHVS  207 (229)
Q Consensus       195 ~kl~DFg~a~~~~  207 (229)
                      ++|+|||.+....
T Consensus       181 v~LIDfg~~~~~~  193 (239)
T PRK01723        181 FWLIDFDRGELRT  193 (239)
T ss_pred             EEEEECCCcccCC
Confidence            9999999987754

>KOG0590|consensus

Probab=99.74  E-value=2e-18  Score=151.58  Aligned_cols=165  Identities=23%  Similarity=0.254  Sum_probs=119.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.+|.|+.+......+.++.|..................+..|..+-..+.|+|++  ..+........  .+..||||
T Consensus       328 ~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~--e~l~~~~~~~~--~~~~mE~~  403 (601)
T KOG0590|consen  328 SGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNII--ETLDIVQEIDG--ILQSMEYC  403 (601)
T ss_pred             ecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchh--hhHHHHhhccc--chhhhhcc
Confidence            478888888877766676777765421000011111122367888889999999985  34434332222  23449999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++ +|-.++..   ...++..++..++.|++.|++|||+.||.|||+|++|+++    ...+.+||+|||.+..+.-+  
T Consensus       404 ~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~----~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  404 PY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV----TENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             cH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE----ecCCceEEeecCcceeeccCcc
Confidence            99 64444343   2468889999999999999999999999999999999999    88889999999998776332  


Q ss_pred             ----cccceeecccCCCCccccC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~  228 (229)
                          .....+|+..|+|||++.+
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~  498 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTG  498 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccc
Confidence                3457899999999999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.74  E-value=6.2e-19  Score=161.03  Aligned_cols=103  Identities=14%  Similarity=0.141  Sum_probs=75.4

Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC--------------
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP--------------  188 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~--------------  188 (229)
                      .++.+||++++ +|..++...  ...+++.+++.++.||++||+|||++||+||||||+|||+...              
T Consensus        54 ~~~~~~e~~~~-~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         54 SIVRALECEDV-SLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             hhhhhhccCCc-cHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            46778898755 544444331  2458899999999999999999999999999999999999431              


Q ss_pred             -CCCCccEEEeecCcceecCcc------------------cccceeecccCCCCccccC
Q psy11822        189 -VRQPYRVKVIDFGSASHVSKA------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       189 -~~~~~~~kl~DFg~a~~~~~~------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                       .+..+.+||+|||+++.....                  .....+||++|||||++.+
T Consensus       131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence             123456788888887643210                  0112468999999999875

>KOG1024|consensus

Probab=99.67  E-value=1.6e-17  Score=134.39  Aligned_cols=164  Identities=13%  Similarity=0.091  Sum_probs=120.5

Q ss_pred             CCceeeeeeecCCCCc-----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGGE-----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |.||+||.|.+++...     .|-+|.++..     ....+...+..|.-.+..+.|||+.-+--+..+   +...-+++
T Consensus       295 GtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-----AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie---~~~~P~V~  366 (563)
T KOG1024|consen  295 GTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-----ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE---DYATPFVL  366 (563)
T ss_pred             CchhheeeeeecccCCcchHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee---ccCcceEE
Confidence            9999999997765433     4555555442     234456677888888888999999732222222   22234678


Q ss_pred             eeeeeCCCCCccCC-----CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        128 MEVTRRSQYTGATA-----PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       128 ~e~~~~~~l~~~~~-----~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      +.++.-|.|+.++.     .....+.++..+...++.|++.|++|||+.+|||.||...|+++    +..-++||+|=.+
T Consensus       367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI----dd~LqVkltDsaL  442 (563)
T KOG1024|consen  367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI----DDQLQVKLTDSAL  442 (563)
T ss_pred             EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee----hhheeEEeccchh
Confidence            99998888777655     43445567777888899999999999999999999999999999    8888999999999


Q ss_pred             ceecCcccccc----eeecccCCCCccccC
Q psy11822        203 ASHVSKAVCNT----YLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~~~~~----~~gt~~y~aPE~l~~  228 (229)
                      |+.+-+..+..    .--...|||||.+.+
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n  472 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQN  472 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhh
Confidence            99886543221    122346999998754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.64  E-value=3.9e-16  Score=133.07  Aligned_cols=142  Identities=20%  Similarity=0.185  Sum_probs=93.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHH----h------------------------h------hhhhhhccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKR----M------------------------L------TMDQVERRITP   98 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~----~------------------------~------~~~~~~~Ei~~   98 (229)
                      |++|+||+|+. .+|+.||||+.++........    .                        .      ..-.+.+|++.
T Consensus       128 aSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n  206 (437)
T TIGR01982       128 ASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN  206 (437)
T ss_pred             eehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHH
Confidence            88999999996 479999999965421110000    0                        0      00024555655


Q ss_pred             ccccc-----CccccceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHH-HHHHHHHCC
Q psy11822         99 GEALN-----HAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLT-ALLKLKQLG  172 (229)
Q Consensus        99 l~~l~-----h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~-gl~~LH~~~  172 (229)
                      +.++.     ++++..+.++... +   ...++||||++|+++........  ...   ....++.+++. .+..+|..|
T Consensus       207 ~~~~~~~~~~~~~v~vP~v~~~~-~---~~~vLvmE~i~G~~L~~~~~~~~--~~~---~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       207 ASELGENFKNDPGVYVPEVYWDR-T---SERVLTMEWIDGIPLSDIAALDE--AGL---DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHhcCCCCCEEeCCEehhh-c---CCceEEEEeECCcccccHHHHHh--cCC---CHHHHHHHHHHHHHHHHHhCC
Confidence            55552     4555444433221 1   12589999999999876643210  011   23456666666 468899999


Q ss_pred             CccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ++|+|+||+||++    ..++.++++|||++..++.
T Consensus       278 ~~H~D~hPgNilv----~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       278 FFHADLHPGNIFV----LKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ceeCCCCcccEEE----CCCCcEEEEeCCCeeECCH
Confidence            9999999999999    7778999999999988864

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.63  E-value=9.7e-17  Score=116.99  Aligned_cols=130  Identities=19%  Similarity=0.131  Sum_probs=96.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.++.||++...  +..+++|.......        ...+.+|+..++.+++.++..+.++.+...  ....+++|||+
T Consensus         8 ~g~~~~v~~~~~~--~~~~~iK~~~~~~~--------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~~v~e~~   75 (155)
T cd05120           8 GGLTNRVYLLGTK--DEDYVLKINPSREK--------GADREREVAILQLLARKGLPVPKVLASGES--DGWSYLLMEWI   75 (155)
T ss_pred             cccccceEEEEec--CCeEEEEecCCCCc--------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccEEEEEec
Confidence            4889999999975  47899998765321        235578888888887643322344444332  24579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC---CCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL---GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~---~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +++.+..+          +......++.++++++++||..   +++|+|++|+||++    +..+.++++|||.+...+
T Consensus        76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~----~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV----DDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEE----ECCcEEEEEecccccCCC
Confidence            99876544          2223356889999999999984   69999999999999    556799999999987544

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0603|consensus

Probab=99.56  E-value=9.7e-17  Score=136.59  Aligned_cols=160  Identities=21%  Similarity=0.239  Sum_probs=119.9

Q ss_pred             cCCceeeeeee---cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPT---DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~---~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|.||.|+++.   -...|..+|+|+.++.........    .-..|..++...+ ||+++.++-.  +  ......+++
T Consensus         4 ~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~----~t~~er~il~~~~~~~f~v~lhya--f--qt~~kl~l~   75 (612)
T KOG0603|consen    4 QGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT----HTKQERIILAFVHNTPFLVKLHYA--F--QTDGKLYLI   75 (612)
T ss_pred             cCCCcchHHHHHhccccccchhhhhccccccccccccc----ccccHHHHHhhccCCCceeeeeee--e--ccccchhHh
Confidence            47888888653   234578899999887533211111    3355666676675 9988755532  2  244567999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ++|..+|.+-.....   ...+++.....+...++-+++++|+.+|+|||+|++||++    +.+|++++.|||+++..-
T Consensus        76 ld~~rgg~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill----d~~Ghi~~tdfglske~v  148 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSK---EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL----LLEGHIKLTDFGLSKEAV  148 (612)
T ss_pred             hhhcccchhhhcccc---CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee----cccCccccCCchhhhHhH
Confidence            999999884333233   3457777788889999999999999999999999999999    999999999999998775


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....  |||..|||||+++|
T Consensus       149 ~~~~~--cgt~eymApEI~~g  167 (612)
T KOG0603|consen  149 KEKIA--CGTYEYRAPEIING  167 (612)
T ss_pred             hhhhc--ccchhhhhhHhhhc
Confidence            54323  99999999999874

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.51  E-value=1.2e-14  Score=125.82  Aligned_cols=145  Identities=19%  Similarity=0.227  Sum_probs=83.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHH----------------------------hhhhhh------hhccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKR----------------------------MLTMDQ------VERRITP   98 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~----------------------------~~~~~~------~~~Ei~~   98 (229)
                      |++|+||+|+...+|+.||||+.++.-......                            ....+.      +.+|+..
T Consensus       130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N  209 (537)
T PRK04750        130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAAN  209 (537)
T ss_pred             CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHH
Confidence            899999999998889999999987532110000                            001112      2334433


Q ss_pred             ccccc----Cc-cccceehhhhhhcccccccceeeeeeeCCCCCccCCCCC---CCCccccCCccchHHHHHHHHHHHHH
Q psy11822         99 GEALN----HA-FVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPP---PAQVLVPAPPGNVTLQVLTALLKLKQ  170 (229)
Q Consensus        99 l~~l~----h~-ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~l~~~~~~~i~~qi~~gl~~LH~  170 (229)
                      +.++.    +. .+..+.++.-. +   ...++||||++|+.+........   ....+.+..+..++.|       +..
T Consensus       210 ~~~~~~~f~~~~~v~VP~v~~d~-s---t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if~  278 (537)
T PRK04750        210 ASQLRRNFEDSDMLYVPEVYWDY-C---SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VFR  278 (537)
T ss_pred             HHHHHHHccCCCCeecceeeccc-C---CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HHh
Confidence            33332    22 22222222111 1   12479999999998765321100   0012322223333333       346


Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      .|++|+|+||+||++..+....+.++++|||++..++.
T Consensus       279 ~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        279 DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            89999999999999943322334999999999988755

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.49  E-value=4.1e-14  Score=105.68  Aligned_cols=126  Identities=16%  Similarity=0.076  Sum_probs=90.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|..+.||+++..  +..|++|+......       ....+.+|+..++.+.+.+++ +.++....    ...++||||+
T Consensus         8 ~G~~~~vy~~~~~--~~~~~lK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~-P~~~~~~~----~~~~lv~e~i   73 (170)
T cd05151           8 GGMTNKNYRVEVA--NKKYVVRIPGNGTE-------LLINRENEAENSKLAAEAGIG-PKLYYFDP----ETGVLITEFI   73 (170)
T ss_pred             CcccCceEEEEEC--CeEEEEEeCCCCcc-------cccCHHHHHHHHHHHHHhCCC-CceEEEeC----CCCeEEEEec
Confidence            3778999999864  78999998755311       111346788888887665543 33333221    1247999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCC-----ccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL-----IHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~i-----iHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ++.++...  .         .....++.+++.+|+.||+.++     +|+|++|+||++    + ++.++++|||.+..-
T Consensus        74 ~G~~l~~~--~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~----~-~~~~~liDf~~a~~~  137 (170)
T cd05151          74 EGSELLTE--D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLL----D-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             CCCccccc--c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEE----E-CCeEEEEecccccCC
Confidence            99886543  0         1123567899999999999885     999999999999    5 457999999998754


Q ss_pred             C
Q psy11822        207 S  207 (229)
Q Consensus       207 ~  207 (229)
                      .
T Consensus       138 ~  138 (170)
T cd05151         138 D  138 (170)
T ss_pred             C
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.48  E-value=2.4e-14  Score=108.73  Aligned_cols=142  Identities=18%  Similarity=0.126  Sum_probs=95.0

Q ss_pred             CCceeeeeeecCC------CCcEEEEehhhHHHHH-----H----HH-------Hhhhhhh----hhccccccccccCcc
Q psy11822         53 DDIGQVNVPTDLE------GGELLAEKADRREFID-----L----LK-------RMLTMDQ----VERRITPGEALNHAF  106 (229)
Q Consensus        53 g~fg~Vy~a~~~~------~~~~vaiK~~~~~~~~-----~----~~-------~~~~~~~----~~~Ei~~l~~l~h~n  106 (229)
                      |.=+.||.|....      .+..+|||+.+.....     .    ..       +......    .++|++.|+++...+
T Consensus         8 GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl~~~G   87 (197)
T cd05146           8 GKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRMQKAG   87 (197)
T ss_pred             CcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            6667799997543      3579999985431110     0    00       0111222    348999999987666


Q ss_pred             ccceehhhhhhcccccccceeeeeeeCCCCCc-cCCCCCCCCccccCCccchHHHHHHHHHHH-HHCCCccccCCCCCee
Q psy11822        107 VTLAHLVDYAHCNNVKASVQMMEVTRRSQYTG-ATAPPPPAQVLVPAPPGNVTLQVLTALLKL-KQLGLIHADLKPENIM  184 (229)
Q Consensus       107 i~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~-~~~~~~~~~~l~~~~~~~i~~qi~~gl~~L-H~~~iiHrDlkp~Nil  184 (229)
                      +..+..+.+      ..-++||||+.++.+.. .+..    ..++..++..+..+++.+|..| |+.|++|+||++.||+
T Consensus        88 v~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          88 IPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             CCCCeEEEe------cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            665555533      12479999998764321 1111    1234444567889999999998 8999999999999999


Q ss_pred             eeCCCCCCccEEEeecCcceecCcc
Q psy11822        185 LVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       185 ~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +    .. +.+.|+|||.|.....+
T Consensus       158 ~----~~-~~v~iIDF~qav~~~hp  177 (197)
T cd05146         158 W----HD-GKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             E----EC-CcEEEEECCCceeCCCC
Confidence            9    42 47999999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.47  E-value=4.4e-15  Score=118.62  Aligned_cols=169  Identities=20%  Similarity=0.164  Sum_probs=90.3

Q ss_pred             ecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc----------Cccccce-ehhh---
Q psy11822         49 FNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN----------HAFVTLA-HLVD---  114 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~----------h~ni~~~-~~~~---  114 (229)
                      +.+.|+++.||.+++..||+.+|+|++.....   ......+++++|.-....+.          |-.++.+ .+..   
T Consensus        19 ~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~---~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~   95 (288)
T PF14531_consen   19 IIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD---ASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG   95 (288)
T ss_dssp             EEEEETTEEEEEEEETTTTEEEEEEEEEESST---THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred             ccccCCceEEEEEEEccCCceEEEEEEecccc---cchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence            33448999999999999999999998554221   11112333333332222221          1111110 0000   


Q ss_pred             ---hhhcc---ccc---ccceeeeeeeCCCCCccC---CCCCC-CCccccCCccchHHHHHHHHHHHHHCCCccccCCCC
Q psy11822        115 ---YAHCN---NVK---ASVQMMEVTRRSQYTGAT---APPPP-AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPE  181 (229)
Q Consensus       115 ---~~~~~---~~~---~~~lv~e~~~~~~l~~~~---~~~~~-~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~  181 (229)
                         +....   +..   ..+++|+-+.... ..+.   ..... ...+...-...+..|+++.+++||+.|++|+||+|+
T Consensus        96 ~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL-~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~  174 (288)
T PF14531_consen   96 KPPFFERGPGQSIYWVLNRFLLMPRAQGDL-QDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPE  174 (288)
T ss_dssp             S-SEEEECETTEEEEEESEEEEEE--SEEH-HHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGG
T ss_pred             CCcceecCCCCccceeehhhhccchhhhcH-HHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccccee
Confidence               01111   111   2355666654433 2221   11000 111222222456799999999999999999999999


Q ss_pred             CeeeeCCCCCCccEEEeecCcceecCcccccceeecccCCCCccc
Q psy11822        182 NIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII  226 (229)
Q Consensus       182 Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l  226 (229)
                      |+|+    +.+|.+.|+||+........... ...+..|.+||..
T Consensus       175 nfll----~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~  214 (288)
T PF14531_consen  175 NFLL----DQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELE  214 (288)
T ss_dssp             GEEE-----TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHH
T ss_pred             eEEE----cCCCCEEEcChHHHeecCceeec-cCCCcccCChhhh
Confidence            9999    88999999999988776554222 3445679999864

>KOG1033|consensus

Probab=99.45  E-value=5e-15  Score=124.04  Aligned_cols=100  Identities=23%  Similarity=0.266  Sum_probs=85.7

Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ..||.|++|.-.+|..++.........+......++.|++.|+.|   ++.+|||+||.||++    ..+.++||.|||+
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~----~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF----SDDDQLKIGDFGL  402 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc----ccchhhhhhhhhh
Confidence            478999999999999998765555567777888999999999999   999999999999999    5555999999999


Q ss_pred             ceecCcc--------cccceeecccCCCCccccCC
Q psy11822        203 ASHVSKA--------VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       203 a~~~~~~--------~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .......        ..+..+||.+||+||++.|+
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~  437 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ  437 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhh
Confidence            8877543        34567999999999999875

>KOG3087|consensus

Probab=99.44  E-value=9.6e-14  Score=102.44  Aligned_cols=147  Identities=16%  Similarity=0.094  Sum_probs=99.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhh-HH-HHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADR-RE-FIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~-~~-~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|.=+.|+++.+.  |+.+.||.=. +. ............+..+|++.|.++.--.|..+.++..    +.+.-.++||
T Consensus        17 QGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~----D~~~~~i~ME   90 (229)
T KOG3087|consen   17 QGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI----DTYGGQIYME   90 (229)
T ss_pred             ccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE----ecCCCeEEEE
Confidence            4777889999876  8999998621 11 1112222334556789999999987666654444421    2223468999


Q ss_pred             eeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        130 VTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       130 ~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      |+++.+ ...++....+.. ...+....++.+|-+.|.-||.++|||+||..+||++..+ +....+.++|||++..-
T Consensus        91 ~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSSVS  166 (229)
T ss_pred             eccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecC-CCcCceEEEeecchhcc
Confidence            999854 333333222111 1112226789999999999999999999999999999554 44557799999998654

>KOG4158|consensus

Probab=99.41  E-value=1.8e-13  Score=111.56  Aligned_cols=101  Identities=23%  Similarity=0.158  Sum_probs=73.6

Q ss_pred             cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      ...|+||.-.+...-..+ ..    +..+.....-++.|+++|+.|||++||.|||+|++|||+.-+++....+.|+|||
T Consensus       316 ~tlylvMkrY~~tLr~yl-~~----~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG  390 (598)
T KOG4158|consen  316 KTLYLVMKRYRQTLREYL-WT----RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG  390 (598)
T ss_pred             ceEEEehhcchhhHHHHH-hc----CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence            345666666555442222 21    2355556678999999999999999999999999999998877888899999999


Q ss_pred             cceecCcc--------cccceeecccCCCCcccc
Q psy11822        202 SASHVSKA--------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       202 ~a~~~~~~--------~~~~~~gt~~y~aPE~l~  227 (229)
                      ++---+..        ..-..-|+..-||||+..
T Consensus       391 CcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  391 CCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             eeeeccccccccccccccccCCCcceecchhhhh
Confidence            87543221        112346777899999863

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.41  E-value=2e-13  Score=103.32  Aligned_cols=135  Identities=27%  Similarity=0.331  Sum_probs=86.7

Q ss_pred             eeeeecCCCCcEEEEehhhHHHH---H-----------------HHHHhhhhhhhhccccccccccCccccceehhhhhh
Q psy11822         58 VNVPTDLEGGELLAEKADRREFI---D-----------------LLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH  117 (229)
Q Consensus        58 Vy~a~~~~~~~~vaiK~~~~~~~---~-----------------~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~  117 (229)
                      ||.|.. ..|..+|+|+.+....   .                 ...........++|.+.|.++...++..+..+.+. 
T Consensus         2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            788886 4578999998432100   0                 00011122346889999999987777555554332 


Q ss_pred             cccccccceeeeeee--CCCCCccCCCCCCCCccccCCccchHHHHHHHHHH-HHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        118 CNNVKASVQMMEVTR--RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLK-LKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       118 ~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~-LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                           .-.+||||++  |..+..+...     .++..+...++.+++..+.. +|..||+|+||.+.||++    +.+ .
T Consensus        80 -----~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv----~~~-~  144 (188)
T PF01163_consen   80 -----RNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV----DDG-K  144 (188)
T ss_dssp             -----TTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE----ETT-C
T ss_pred             -----CCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe----ecc-e
Confidence                 2379999999  5556555443     34456678899999996666 579999999999999999    554 8


Q ss_pred             EEEeecCcceecCcc
Q psy11822        195 VKVIDFGSASHVSKA  209 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~  209 (229)
                      +.|+|||.+.....+
T Consensus       145 ~~iIDf~qav~~~~p  159 (188)
T PF01163_consen  145 VYIIDFGQAVDSSHP  159 (188)
T ss_dssp             EEE--GTTEEETTST
T ss_pred             EEEEecCcceecCCc
Confidence            999999999877654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.36  E-value=2.4e-13  Score=102.09  Aligned_cols=67  Identities=31%  Similarity=0.329  Sum_probs=58.5

Q ss_pred             CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccccceeecccCCCCccc
Q psy11822        147 QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII  226 (229)
Q Consensus       147 ~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l  226 (229)
                      ..+++.++..++.|++.||.|||+.+      ||+|||+    +.++.+|+  ||++.......   ..||+.|||||++
T Consensus        12 ~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~----~~~~~~~~--fG~~~~~~~~~---~~g~~~y~aPE~~   76 (176)
T smart00750       12 RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL----TWDGLLKL--DGSVAFKTPEQ---SRVDPYFMAPEVI   76 (176)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE----cCccceee--ccceEeecccc---CCCcccccChHHh
Confidence            35899999999999999999999998      9999999    77889998  99998765532   3689999999998


Q ss_pred             cC
Q psy11822        227 LG  228 (229)
Q Consensus       227 ~~  228 (229)
                      .+
T Consensus        77 ~~   78 (176)
T smart00750       77 QG   78 (176)
T ss_pred             cC
Confidence            75

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=1.3e-12  Score=96.78  Aligned_cols=135  Identities=20%  Similarity=0.205  Sum_probs=94.5

Q ss_pred             cCCceeeeeeecCCCCcEEEEeh-hhHHHH-HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKA-DRREFI-DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~-~~~~~~-~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|.=+.||.+.+.  |.++++|. +++... ......-..++..+|++++.++.-..+..+.++++..    ....|+||
T Consensus         6 ~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~----~~~~I~me   79 (204)
T COG3642           6 QGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP----DNGLIVME   79 (204)
T ss_pred             CCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC----CCCEEEEE
Confidence            4666677877654  55677775 222111 1122222344668999999988766776555554432    33469999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |.+|-.+.+.+...          ...++..+-.-+.-||..||+|+||.++||++    ... .+.++|||++....
T Consensus        80 ~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl----~~~-~i~~IDfGLg~~s~  142 (204)
T COG3642          80 YIEGELLKDALEEA----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIIL----SGG-RIYFIDFGLGEFSD  142 (204)
T ss_pred             EeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcCeecCCCccceEEE----eCC-cEEEEECCcccccc
Confidence            99999987665551          24678888888999999999999999999999    433 49999999998653

>KOG0606|consensus

Probab=99.34  E-value=7.3e-13  Score=118.96  Aligned_cols=62  Identities=31%  Similarity=0.492  Sum_probs=52.7

Q ss_pred             HHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-----------------cccceeecccCCCCc
Q psy11822        162 LTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----------------VCNTYLQSRYYRAPE  224 (229)
Q Consensus       162 ~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-----------------~~~~~~gt~~y~aPE  224 (229)
                      +-+++|||+.||+|||+||+|.+|    +.-|++|+.|||+++...-.                 .....+|||.|.|||
T Consensus       153 vla~Eylh~ygivhrdlkpdnllI----T~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLI----TSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCccee----eecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            788999999999999999999999    88889999999998754211                 113469999999999


Q ss_pred             ccc
Q psy11822        225 IIL  227 (229)
Q Consensus       225 ~l~  227 (229)
                      ++.
T Consensus       229 Vil  231 (1205)
T KOG0606|consen  229 VIL  231 (1205)
T ss_pred             hhh
Confidence            974

>KOG1240|consensus

Probab=99.28  E-value=1.9e-13  Score=123.08  Aligned_cols=157  Identities=22%  Similarity=0.214  Sum_probs=108.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHH-HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFI-DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      +.|=.|.+|++.+ |. |+||++-+... -..+.   ..+-..|++ ...+++||.+-...+    -......|+|-+|+
T Consensus        34 tRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~---~~qrL~~ik-~~l~~~pn~lPfqk~----~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   34 TRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRP---FKQRLEEIK-FALMKAPNCLPFQKV----LVTDKAAYLVRQYV  103 (1431)
T ss_pred             hhhhhhhhccCCC-ce-EEEEEEeccCCCCCchH---HHHHHHHHH-HHhhcCCcccchHHH----HHhhHHHHHHHHHH
Confidence            5688899999864 44 99998654210 00111   112244444 556689988633322    12334569999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec--C--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--S--  207 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~--~--  207 (229)
                      ....++++..+    .-+...+.+-|+.|++.||..+|..||+|+|||.+|||+    +.=..+.|+||..-+..  +  
T Consensus       104 khnLyDRlSTR----PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi----TSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen  104 KHNLYDRLSTR----PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI----TSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             hhhhhhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE----eeechhhhhcccccCCccCCCC
Confidence            99999988665    346666777899999999999999999999999999999    55558999999976654  1  


Q ss_pred             -cccccceeec----ccCCCCcccc
Q psy11822        208 -KAVCNTYLQS----RYYRAPEIIL  227 (229)
Q Consensus       208 -~~~~~~~~gt----~~y~aPE~l~  227 (229)
                       +........|    .+|.|||-+-
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv  200 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFV  200 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhh
Confidence             1122223333    3599999764

>KOG0590|consensus

Probab=99.22  E-value=3e-12  Score=112.89  Aligned_cols=163  Identities=17%  Similarity=0.219  Sum_probs=121.1

Q ss_pred             cCCceeeeeeecC-CCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL-EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|.|+.|-.+... .+...+|.|.+....    .......+...|..+-+.+. |.|++  +.++...  +....+++++
T Consensus        30 ~gs~~~~~~~~~~~~~~~~~a~~~~s~~~----~~~~~~~~i~~e~~~~~~~s~h~n~~--~~~~~~~--~~~~~~~~~~  101 (601)
T KOG0590|consen   30 KGSFSSSALASNSRDPESSSATKPISIPP----KSEDSSEHIDTETDIQKKLSKHSNTV--HMIEPSS--SPRSYLLSLS  101 (601)
T ss_pred             ccccchhhhhhhcCCCcceeeccCCCCCC----CccchhhhcCcccccccccccccccc--ccCCccC--CCcccccccC
Confidence            4888888887763 345677888766532    11223345567888878786 99986  5554443  4445689999


Q ss_pred             eeeCCCCCccC-CCCCCCCccccCCccchHHHHHHHHHHHH-HCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceec
Q psy11822        130 VTRRSQYTGAT-APPPPAQVLVPAPPGNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHV  206 (229)
Q Consensus       130 ~~~~~~l~~~~-~~~~~~~~l~~~~~~~i~~qi~~gl~~LH-~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~  206 (229)
                      |..++++-.-+ ..  .....+...+-.++.|+..++.|+| ..++.|||+||+|.++    +..+ .++++|||+|..+
T Consensus       102 ~s~g~~~f~~i~~~--~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l----~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  102 YSDGGSLFSKISHP--DSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL----DESGSALKIADFGLATAY  175 (601)
T ss_pred             cccccccccccccC--CccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh----ccCCCcccCCCchhhccc
Confidence            98888844443 22  1225777888999999999999999 9999999999999999    7777 9999999999877


Q ss_pred             Cc-c----cccceee-cccCCCCccccC
Q psy11822        207 SK-A----VCNTYLQ-SRYYRAPEIILG  228 (229)
Q Consensus       207 ~~-~----~~~~~~g-t~~y~aPE~l~~  228 (229)
                      .. .    .....+| ++.|+|||...+
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~  203 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSG  203 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccc
Confidence            55 2    2345688 999999999865

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.20  E-value=1.2e-11  Score=98.93  Aligned_cols=145  Identities=16%  Similarity=0.079  Sum_probs=93.3

Q ss_pred             eeeeecCCCCcEEEEehhhHHHHHH-HHH---h-hhhhhhhccccccccccCccccceehhhhhhccc---ccccceeee
Q psy11822         58 VNVPTDLEGGELLAEKADRREFIDL-LKR---M-LTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN---VKASVQMME  129 (229)
Q Consensus        58 Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~---~-~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~---~~~~~lv~e  129 (229)
                      |.+...  .|+.|.||......... ...   . .....+.+|.+.+..+..-+|..+..+.+.....   ....++|||
T Consensus        38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            455543  47789999543211110 000   0 0111357888888888766776666655543211   234689999


Q ss_pred             eeeCC-CCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC---CCCCccEEEeecCccee
Q psy11822        130 VTRRS-QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP---VRQPYRVKVIDFGSASH  205 (229)
Q Consensus       130 ~~~~~-~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~---~~~~~~~kl~DFg~a~~  205 (229)
                      ++++. ++..+..... ....+......++.+++..+.-||..||+|+|++++|||+...   .+....+.|+||+.+..
T Consensus       116 ~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        116 DLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             eCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            99986 4655543210 1123344556899999999999999999999999999999531   12356899999998854

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.19  E-value=2e-11  Score=94.88  Aligned_cols=143  Identities=17%  Similarity=0.187  Sum_probs=94.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc-ccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN-VKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~-~~~~~lv~e~  130 (229)
                      .|..+.||+++.. +|+.+++|.......     ......+.+|+.++..+.+.++..+.++.+..... ....++||||
T Consensus         8 ~G~~n~~~~v~~~-~g~~~ilK~~~~~~~-----~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           8 GGQSNLTYLLTAG-GGRRLVLRRPPPGAL-----LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             CCccceEEEEEec-CCcceEEEeCCCccc-----CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            4788999999864 368999998654311     11233567888888888664443333443332211 1245899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH----------------------------------------
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ----------------------------------------  170 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~----------------------------------------  170 (229)
                      ++|.++......    ..+++.....++.+++.+|..||+                                        
T Consensus        82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (223)
T cd05154          82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM  157 (223)
T ss_pred             eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence            999886655331    124444555667777777777773                                        


Q ss_pred             ----------------CCCccccCCCCCeeeeCCCCC--CccEEEeecCcceecCc
Q psy11822        171 ----------------LGLIHADLKPENIMLVDPVRQ--PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 ----------------~~iiHrDlkp~Nil~~~~~~~--~~~~kl~DFg~a~~~~~  208 (229)
                                      ..++|+|++|+||++    +.  .+.+.|+||+.+..-.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~----~~~~~~~~~iID~e~~~~g~~  209 (223)
T cd05154         158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLF----HPDEPRVVAVLDWELATLGDP  209 (223)
T ss_pred             HHHHHHHHhhCCCCCCcEEEECCCCcccEEE----cCCCCcEEEEEeccccccCCh
Confidence                            235899999999999    55  45789999999875443

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0195|consensus

Probab=99.14  E-value=1.9e-11  Score=95.36  Aligned_cols=155  Identities=11%  Similarity=0.091  Sum_probs=110.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      ..-|+.|+|++.  |..++.|++......    ...-..|..|.-.|+-+.||||.  .++..  |..+....++..|++
T Consensus       201 ~hsgelwrgrwq--gndivakil~vr~~t----~risrdfneefp~lrifshpnil--pvlga--cnsppnlv~isq~mp  270 (448)
T KOG0195|consen  201 SHSGELWRGRWQ--GNDIVAKILNVREVT----ARISRDFNEEFPALRIFSHPNIL--PVLGA--CNSPPNLVIISQYMP  270 (448)
T ss_pred             CCCccccccccc--Ccchhhhhhhhhhcc----hhhcchhhhhCcceeeecCCchh--hhhhh--ccCCCCceEeeeecc
Confidence            445899999998  667888887764332    12223578899999999999996  45544  556677899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEE--eecCcceecCc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKV--IDFGSASHVSK  208 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl--~DFg~a~~~~~  208 (229)
                      .|+|...+.... ...++..++.+++..+++|++|||+..  |.---|.+..+++    +++.+.+|  +|--++...  
T Consensus       271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi----dedltarismad~kfsfqe--  343 (448)
T KOG0195|consen  271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI----DEDLTARISMADTKFSFQE--  343 (448)
T ss_pred             chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe----cchhhhheecccceeeeec--
Confidence            999655555433 235788899999999999999999865  4455688889999    76665554  333332211  


Q ss_pred             ccccceeecccCCCCcccc
Q psy11822        209 AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~  227 (229)
                         ....-.|.||+||.|.
T Consensus       344 ---~gr~y~pawmspealq  359 (448)
T KOG0195|consen  344 ---VGRAYSPAWMSPEALQ  359 (448)
T ss_pred             ---cccccCcccCCHHHHh
Confidence               1223357899999875

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.05  E-value=1.6e-10  Score=89.19  Aligned_cols=138  Identities=19%  Similarity=0.186  Sum_probs=92.3

Q ss_pred             CCcEEEEehhhHHHHHH-HHHhhhhhhhhccccccccccCccccceehhhhhhcccc--cccceeeeeeeCC-CCCccCC
Q psy11822         66 GGELLAEKADRREFIDL-LKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV--KASVQMMEVTRRS-QYTGATA  141 (229)
Q Consensus        66 ~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~--~~~~lv~e~~~~~-~l~~~~~  141 (229)
                      .++.+-+|......... .........+.+|...+..+....|..+..+.+......  ...++|+|++++. ++..+..
T Consensus        31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~  110 (206)
T PF06293_consen   31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ  110 (206)
T ss_pred             cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence            35667676533221111 111122335578888887776667766565555543211  3458999999986 4666655


Q ss_pred             CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        142 PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       142 ~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ..   ...+......++.+++..++-||..||+|+|+++.|||+... +....+.++||+.++...
T Consensus       111 ~~---~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~-~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  111 QW---EQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPD-DGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             hh---cccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCC-CCceeEEEEcchhceeCC
Confidence            41   124555667899999999999999999999999999999544 234589999999887654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1023|consensus

Probab=99.04  E-value=8.1e-11  Score=100.16  Aligned_cols=120  Identities=17%  Similarity=0.204  Sum_probs=91.0

Q ss_pred             cccccCccccceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCC-cccc
Q psy11822         99 GEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL-IHAD  177 (229)
Q Consensus        99 l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~i-iHrD  177 (229)
                      |+.+.|.|++  .+++...  +....++|.+||..|++.+.+..  ....+++--...+++.++.||.|+|.-.| .|+.
T Consensus         1 l~~l~h~n~~--~f~g~~~--~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~   74 (484)
T KOG1023|consen    1 LRQLDHDNLN--KFIGASV--DGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGA   74 (484)
T ss_pred             Ccccchhhhh--hheeeEe--cCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCcceeeee
Confidence            4567899997  3444433  34667899999999998777665  23346666667889999999999998665 9999


Q ss_pred             CCCCCeeeeCCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        178 LKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       178 lkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      +++.|+++    +..+.+||.|||+.......    ......-..-|.|||.+++
T Consensus        75 l~s~nClv----d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~  125 (484)
T KOG1023|consen   75 LKSSNCLV----DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRG  125 (484)
T ss_pred             ecccccee----eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcc
Confidence            99999999    99999999999998877431    1112223345999999976

>KOG0601|consensus

Probab=98.94  E-value=2e-10  Score=98.12  Aligned_cols=161  Identities=22%  Similarity=0.180  Sum_probs=111.6

Q ss_pred             CCceeeeeeec--CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTD--LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |.+|.||.+..  ..++..+|+|.-+..........    .=.+|+.....+ .|+|.++  ......  .....++-+|
T Consensus       127 g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~----~k~~~~~s~~~i~~~~~~v~--~~~~~e--~~~~lfiqtE  198 (524)
T KOG0601|consen  127 GSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSK----RKLREFLSHHKIDSHENPVR--DSPAWE--GSGILFIQTE  198 (524)
T ss_pred             CCCceeecccCCcccCCcccccccccCCCCCccccc----cccchhhcccccCccccccc--cCcccc--cCCcceeeec
Confidence            77999999988  88899999998332211111111    115666666666 5777763  232332  3345677788


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHH----HHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcce
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLT----ALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSAS  204 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~----gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~  204 (229)
                      .+... +..+....  ..-++...+...+.+..+    ||.++|..+++|-|+||.||+.    ..+ ..+++.|||+..
T Consensus       199 ~~~~s-l~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~----~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  199 LCGES-LQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT----TSDWTSCKLTDFGLVS  271 (524)
T ss_pred             cccch-hHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec----ccccceeecCCcceeE
Confidence            87744 33333332  233777778888999999    9999999999999999999999    555 699999999999


Q ss_pred             ecCccccc-------ceeecccCCCCccccC
Q psy11822        205 HVSKAVCN-------TYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~~~~-------~~~gt~~y~aPE~l~~  228 (229)
                      .+.+....       ...|...|++||++.+
T Consensus       272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~  302 (524)
T KOG0601|consen  272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNG  302 (524)
T ss_pred             EccCCccccceeeeecCCCCceEeChhhhcc
Confidence            88664321       1256667999999865

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.93  E-value=3.6e-09  Score=91.53  Aligned_cols=143  Identities=21%  Similarity=0.231  Sum_probs=88.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHH---------------------------------HHHH-hhhhhhhhccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFID---------------------------------LLKR-MLTMDQVERRITP   98 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~---------------------------------~~~~-~~~~~~~~~Ei~~   98 (229)
                      ++.|+||+|+.. +|+.||||+.++.-..                                 +..+ ....-.+.+|+.-
T Consensus       136 ASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n  214 (517)
T COG0661         136 ASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAAN  214 (517)
T ss_pred             hhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHH
Confidence            789999999975 5999999995431110                                 0000 0000123455555


Q ss_pred             cccc-----cCccccceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHH-HHHHHHCC
Q psy11822         99 GEAL-----NHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTA-LLKLKQLG  172 (229)
Q Consensus        99 l~~l-----~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~g-l~~LH~~~  172 (229)
                      +.++     ..+++..+.++.-...    ...++|||++|..+........  ..++   ...++..++++ +..+=..|
T Consensus       215 ~~~~~~nf~~~~~v~VP~V~we~t~----~~VLtmE~i~Gi~i~d~~~l~~--~g~d---~k~ia~~~~~~f~~q~~~dg  285 (517)
T COG0661         215 AERFRENFKDDPDVYVPKVYWEYTT----RRVLTMEWIDGIKISDIAALKS--AGID---RKELAELLVRAFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHcCCCCCeEeceeehhccC----CcEEEEEeeCCEecccHHHHHh--cCCC---HHHHHHHHHHHHHHHHHhcC
Confidence            5444     3555655554432221    2479999999988776643311  1233   22333333332 22233479


Q ss_pred             CccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +.|.|.+|+||++    ..++.+.+.|||....+++.
T Consensus       286 ffHaDpHpGNi~v----~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         286 FFHADPHPGNILV----RSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             ccccCCCccceEE----ecCCcEEEEcCcceecCCHH
Confidence            9999999999999    88899999999999887653

>KOG1235|consensus

Probab=98.78  E-value=1.2e-08  Score=88.18  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=55.4

Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHH-HHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~L-H~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ..++|||++|..++++..-.  ...++..   .++..+.++...+ =..|.+|+|-+|+||++......++.+.+.|||+
T Consensus       277 RVLtME~~~G~~i~Dl~~i~--~~gi~~~---~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl  351 (538)
T KOG1235|consen  277 RVLTMEYVDGIKINDLDAID--KRGISPH---DILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGL  351 (538)
T ss_pred             eEEEEEecCCccCCCHHHHH--HcCCCHH---HHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccc
Confidence            58999999999866652221  1124433   4555555544332 2578999999999999964434577999999999


Q ss_pred             ceecCc
Q psy11822        203 ASHVSK  208 (229)
Q Consensus       203 a~~~~~  208 (229)
                      ...++.
T Consensus       352 ~~~is~  357 (538)
T KOG1235|consen  352 YAVISH  357 (538)
T ss_pred             cccccH
Confidence            877654

>KOG3741|consensus

Probab=98.76  E-value=9.7e-09  Score=86.97  Aligned_cols=152  Identities=14%  Similarity=0.045  Sum_probs=105.3

Q ss_pred             eeecccCC-c-eeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         47 YIFNCLDD-I-GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        47 ~~~~~~g~-f-g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |.++..++ | .+.|+|+...+|..|++|.++......   .   .....-++.++++.|+|++.++-+.......+..+
T Consensus       279 ~pl~~~~~~~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~---~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~Sl  352 (655)
T KOG3741|consen  279 YPLELLNDLFSITTYKATSNVDGNAYVLKRLHGDRDQS---T---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSL  352 (655)
T ss_pred             eecccccccccceeEeeeeccCCceeeeeeeccccccC---c---ccchHHHHHHHHhccCceeehhhhhhhhccCcceE
Confidence            33444454 5 458999999999999999984321110   0   00022355678899999986555444344455678


Q ss_pred             ceeeeeeeCCC-CCccCCCC------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQ-YTGATAPP------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~-l~~~~~~~------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      ++|++|.++.. |.++....            ......++...+.++.|+..||.++|+.|+.-+-|.|.+|++    ++
T Consensus       353 vlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv----~G  428 (655)
T KOG3741|consen  353 VLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV----TG  428 (655)
T ss_pred             EEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe----eC
Confidence            99999999866 32221111            112346667789999999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCc
Q psy11822        192 PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~  208 (229)
                      ..+++|...|..-.+..
T Consensus       429 ~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  429 KMRIRISGCGIMDVLQE  445 (655)
T ss_pred             cceEEEecccceeeecC
Confidence            66888888777665543

>KOG1243|consensus

Probab=98.76  E-value=2.5e-09  Score=92.73  Aligned_cols=128  Identities=16%  Similarity=0.101  Sum_probs=93.2

Q ss_pred             ee-eeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeeeCCCC
Q psy11822         58 VN-VPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQY  136 (229)
Q Consensus        58 Vy-~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l  136 (229)
                      +| .|..+.++.+|.|.+.+....      ...+.+.+.++.|+.++||||+  ..++..+  .....|+|+|-+..=. 
T Consensus        27 ~~~~~t~k~~~~~vsVF~~~~~~~------~~~~~~~~A~k~lKtlRHP~Il--~yL~t~e--~~~~~ylvTErV~Pl~-   95 (690)
T KOG1243|consen   27 LWPDGTRKADGGPVSVFVYKRSNG------EVTELAKRAVKRLKTLRHPNIL--SYLDTTE--EEGTLYLVTERVRPLE-   95 (690)
T ss_pred             cccccceeccCCceEEEEEeCCCc------hhhHHHHHHHHHhhhccCchhh--hhhhhhc--ccCceEEEeeccccHH-
Confidence            45 466677888888888766422      1223446778889999999996  3343333  3346799999875422 


Q ss_pred             CccCCCCCCCCccccCCccchHHHHHHHHHHHH-HCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        137 TGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       137 ~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH-~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                       .....      ++...++-.+.||+.||.||| +++++|++|..+.|++    +..|..||++|.++...+
T Consensus        96 -~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV----n~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen   96 -TVLKE------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV----NESGEWKLGGLELVSKAS  156 (690)
T ss_pred             -HHHHH------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE----cCCCcEEEeeeEEEeccc
Confidence             11121      334455667899999999998 6789999999999999    999999999999986553

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.75  E-value=3.8e-08  Score=77.48  Aligned_cols=138  Identities=22%  Similarity=0.223  Sum_probs=94.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhH---HHH------H---HHHHh----hhhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRR---EFI------D---LLKRM----LTMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~---~~~------~---~~~~~----~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |.=+.||.|.+. .|.++|||.-+.   ++.      +   .....    .++..+++|.+.|..|.......+.-+   
T Consensus       102 GKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~---  177 (304)
T COG0478         102 GKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPI---  177 (304)
T ss_pred             CccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCcc---
Confidence            555679999975 799999996211   000      0   00000    123346889999988855433222322   


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                         ..+.-.+||||++|-.|....        ++.+.+-.++..|+.-+.-+-..|+||+|+++=||++    +.+|.+.
T Consensus       178 ---~~nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV----~~dg~~~  242 (304)
T COG0478         178 ---AWNRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV----TEDGDIV  242 (304)
T ss_pred             ---ccccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE----ecCCCEE
Confidence               112347999999997765542        2345556778888888888889999999999999999    8888999


Q ss_pred             EeecCcceecCcc
Q psy11822        197 VIDFGSASHVSKA  209 (229)
Q Consensus       197 l~DFg~a~~~~~~  209 (229)
                      ++||=-+...+.+
T Consensus       243 vIDwPQ~v~~~hp  255 (304)
T COG0478         243 VIDWPQAVPISHP  255 (304)
T ss_pred             EEeCcccccCCCC
Confidence            9999988766543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.73  E-value=5.4e-08  Score=74.87  Aligned_cols=67  Identities=18%  Similarity=0.341  Sum_probs=53.1

Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      .+++|||++|-.+.....       +++    .+...+.+++.-||+.|+.|+|..|+|+++    +. +.++++||+..
T Consensus       118 ~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv----~~-~~i~iID~~~k  181 (229)
T PF06176_consen  118 YVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLV----SN-NGIRIIDTQGK  181 (229)
T ss_pred             EEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEE----EC-CcEEEEECccc
Confidence            468999999988765532       221    356778899999999999999999999999    43 35999999987


Q ss_pred             eec
Q psy11822        204 SHV  206 (229)
Q Consensus       204 ~~~  206 (229)
                      +..
T Consensus       182 ~~~  184 (229)
T PF06176_consen  182 RMS  184 (229)
T ss_pred             ccc
Confidence            644

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1266|consensus

Probab=98.70  E-value=6e-10  Score=89.26  Aligned_cols=164  Identities=15%  Similarity=0.049  Sum_probs=103.8

Q ss_pred             eeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc-cccccceeeeeeeCC
Q psy11822         56 GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN-NVKASVQMMEVTRRS  134 (229)
Q Consensus        56 g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~-~~~~~~lv~e~~~~~  134 (229)
                      -.||++.+.+.|-.|+.-.+.............  ....=+..+-.+.|.||+..|-+.-.... +.....++.||+..|
T Consensus        80 d~v~lamd~e~g~evvwneVq~~~rK~~~~qee--k~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssg  157 (458)
T KOG1266|consen   80 DDVYLAMDTEEGVEVVWNEVQFSERKNPKEQEE--KRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSG  157 (458)
T ss_pred             HHHHHHhhhccCchhhHHHHHHHHhcChhhCHH--HHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccch
Confidence            348999988888888777665543322221111  00111223445679998754443222212 345678899999999


Q ss_pred             CCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEEeecCcceecCc---
Q psy11822        135 QYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---  208 (229)
Q Consensus       135 ~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~---  208 (229)
                      ++..++++.. ....+......+|+.||++||.|||+..  |+|+++..+.|++    ..++.+||.--.-...-..   
T Consensus       158 s~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi----q~ngLIkig~~ap~s~h~s~~~  233 (458)
T KOG1266|consen  158 SLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI----QHNGLIKIGSVAPDSTHPSVNS  233 (458)
T ss_pred             hHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee----cCCceEEecccCccccchhhhh
Confidence            9776655422 2344666667899999999999999876  9999999999999    7777888754332221111   


Q ss_pred             ---ccccceeecccCCCCcc
Q psy11822        209 ---AVCNTYLQSRYYRAPEI  225 (229)
Q Consensus       209 ---~~~~~~~gt~~y~aPE~  225 (229)
                         .......+.++|.|||.
T Consensus       234 ~~~~Ek~~~~~~~g~~a~~s  253 (458)
T KOG1266|consen  234 TREAEKSVNTSLPGFSAPES  253 (458)
T ss_pred             hhHhhhhccccCCccccCCc
Confidence               01123455677888874

>PRK09902 hypothetical protein; Provisional

Probab=98.68  E-value=1.5e-08  Score=77.59  Aligned_cols=148  Identities=11%  Similarity=0.066  Sum_probs=95.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc---ccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC---NNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~lv~e  129 (229)
                      |+.+.|++-...  |+.+=+|.-............-...|.+|+..+..+..-++..+..+ ++..   ......+||+|
T Consensus        29 gG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe  105 (216)
T PRK09902         29 NGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTE  105 (216)
T ss_pred             CCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEE
Confidence            667778876543  44677775331111111101133467899999999977777655555 3321   11234588999


Q ss_pred             eeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        130 VTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       130 ~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      -+++-. |..+.... ...+.+......+..+++..++-||+.|+.|+|+-+.||++-..  ....++++||.-++..
T Consensus       106 ~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~--g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        106 DMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE--GKAEAGFLDLEKSRRR  180 (216)
T ss_pred             eCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC--CCeeEEEEEhhccchh
Confidence            877654 55554331 11134445557899999999999999999999999999999321  1235999999988765

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.68  E-value=1.1e-07  Score=74.00  Aligned_cols=142  Identities=19%  Similarity=0.230  Sum_probs=89.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHH------------------HhhhhhhhhccccccccccCccccceehhh
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLK------------------RMLTMDQVERRITPGEALNHAFVTLAHLVD  114 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~------------------~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~  114 (229)
                      |.=+.||+|.. .++..+|+|+.+.....-..                  ......=...|..-|+++.-..+..+.-+.
T Consensus        59 GKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~  137 (268)
T COG1718          59 GKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIA  137 (268)
T ss_pred             CcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCcee
Confidence            55677999985 56899999997653322111                  000000124455555555444332222121


Q ss_pred             hhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCc
Q psy11822        115 YAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       115 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      +      ....+||||+....   ..........+...++..+..++++.+.-|-. .++||+||+.=|||+    . .+
T Consensus       138 ~------~~nVLvMEfIg~~g---~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~----~-~~  203 (268)
T COG1718         138 F------RNNVLVMEFIGDDG---LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV----H-DG  203 (268)
T ss_pred             e------cCCeEEEEeccCCC---CCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE----E-CC
Confidence            1      12379999998763   11111112234444678889999999999877 999999999999999    4 56


Q ss_pred             cEEEeecCcceecCcc
Q psy11822        194 RVKVIDFGSASHVSKA  209 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~  209 (229)
                      .+.|+|||-|.....+
T Consensus       204 ~p~iID~~QaV~~~hp  219 (268)
T COG1718         204 EPYIIDVSQAVTIDHP  219 (268)
T ss_pred             eEEEEECccccccCCC
Confidence            8999999999877654

>KOG0601|consensus

Probab=98.63  E-value=1.2e-08  Score=87.41  Aligned_cols=139  Identities=19%  Similarity=0.241  Sum_probs=94.7

Q ss_pred             CCceeeeeeecC-CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcc-cccccceeee
Q psy11822         53 DDIGQVNVPTDL-EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCN-NVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~-~~~~~~lv~e  129 (229)
                      |.|+.|+..... .++..|++|.+.+............    .|+.+...+ .|.+++     .+.... .....|+--|
T Consensus       276 ~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl----~ev~l~~~l~~~~~~~-----g~~~~W~~~r~~~ip~e  346 (524)
T KOG0601|consen  276 GNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSL----GEVILEAILGSHLPSV-----GKNSSWSQLRQGYIPLE  346 (524)
T ss_pred             CccccceeeeecCCCCceEeChhhhccccchHhhhcch----hhhhHhhHhhcccccC-----CCCCCccccccccCchh
Confidence            556677766544 6788999998776544443434333    333333333 344333     111111 1123578899


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||++++.......   ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+.   +..++.|||++..+
T Consensus       347 ~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~---~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  347 FCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG---FFSKLGDFGCWTRL  417 (524)
T ss_pred             hhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch---hhhhcccccccccc
Confidence            9999884433322   34678888899999999999999999999999999999995432   78999999998754

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.23  E-value=1.2e-06  Score=68.72  Aligned_cols=70  Identities=10%  Similarity=0.025  Sum_probs=44.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|.-+.||+.    .|..+++|..+...        ....+.+|.++++.+..-.+..+..+.+....  ....+|||++
T Consensus        11 ~G~t~~~y~~----~~~~~VlR~~~~~~--------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--~~~glv~e~i   76 (226)
T TIGR02172        11 EGGNGESYTH----KTGKWMLKLYNPGF--------DKETIKREFDASRKVFSLGIPTPHPFDLVEDG--GRLGLIYELI   76 (226)
T ss_pred             CCCCcceeEe----cCCCEEEEeCCCCC--------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--Ceeeeeeeec
Confidence            3777889984    25568899865421        12234778888888765555444555554332  3357899999


Q ss_pred             eCCC
Q psy11822        132 RRSQ  135 (229)
Q Consensus       132 ~~~~  135 (229)
                      +|..
T Consensus        77 ~G~~   80 (226)
T TIGR02172        77 VGKR   80 (226)
T ss_pred             CCcc
Confidence            9963

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0606|consensus

Probab=98.18  E-value=8.9e-07  Score=80.76  Aligned_cols=162  Identities=16%  Similarity=0.130  Sum_probs=108.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      +.++.++.+.-..+|...+.|+......   ......+...++-.++-...+|.++.  ...-+  ......+++++|+.
T Consensus       815 ~sp~ss~p~~pa~sgh~~~~~v~~~ap~---i~~~~~~s~r~~s~~~i~p~~P~v~~--~~~s~--~~rsP~~L~~~~~~  887 (1205)
T KOG0606|consen  815 GSPSSSFPASPAGSGHTRPSKVHGLAPK---IRTNDYESIRSKSNILITPRSPAVVR--SFPSF--PCRSPLPLVGHYLN  887 (1205)
T ss_pred             CCCcccccCCccccccccchhhhccchh---hccccccccCCccCccccCCCCceec--ccCCC--CCCCCcchhhHHhc
Confidence            8899999998877887778877554211   11112222233333333334454431  11011  12235689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC-----
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-----  207 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~-----  207 (229)
                      ++.|.-.+..   .+..+.+-++.....+..++++||...+.|||++|.|++.    ...+..++.|||......     
T Consensus       888 ~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~----~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  888 GGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI----AYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             cCCchhhhhc---CCCcccccccchhHHHHhhhhccccchhhcccccccchhh----cccCCcccCccccccccccccCc
Confidence            9886655555   3357777788899999999999999999999999999999    788899999998432210     


Q ss_pred             ----------------cc------------cccceeecccCCCCccccC
Q psy11822        208 ----------------KA------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ----------------~~------------~~~~~~gt~~y~aPE~l~~  228 (229)
                                      ..            ......||+.|.+||.+.|
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg 1009 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG 1009 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc
Confidence                            00            0123589999999999876

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.11  E-value=5.1e-06  Score=65.71  Aligned_cols=71  Identities=11%  Similarity=0.011  Sum_probs=43.9

Q ss_pred             CCc-eeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDI-GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~f-g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |.. ..||+....  +..+.+|......         ...+.+|+++++.+... +..+.++.+....  ...++|||++
T Consensus         9 g~~~~~v~~~~~~--~~~~~vk~~~~~~---------~~~~~~E~~~l~~l~~~-~~vP~v~~~~~~~--~~~~lv~e~i   74 (244)
T cd05150           9 GQSGATVYRLDGK--NPGLYLKIAPSGP---------TYELEREAERLRWLAGK-LPVPEVIDYGSDD--GRAWLLTSAV   74 (244)
T ss_pred             CCCcCeEEEEcCC--CCcEEEEecCCCc---------ccchHHHHHHHHHHHhc-CCCCeEEEEEecC--CccEEEEEee
Confidence            444 678998753  4789999865421         11346677777777432 4344555443322  3358999999


Q ss_pred             eCCCCC
Q psy11822        132 RRSQYT  137 (229)
Q Consensus       132 ~~~~l~  137 (229)
                      +|.++.
T Consensus        75 ~G~~l~   80 (244)
T cd05150          75 PGVPAA   80 (244)
T ss_pred             CCccHh
Confidence            987644

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=98.03  E-value=8.7e-06  Score=75.34  Aligned_cols=79  Identities=14%  Similarity=0.124  Sum_probs=49.3

Q ss_pred             CCceeeeeeecCCCC--cEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhccc-ccccceee
Q psy11822         53 DDIGQVNVPTDLEGG--ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNN-VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~-~~~~~lv~  128 (229)
                      |..+.+|+......+  ..+++|..+....     ......+.+|+++++.+. |+++..+.++.++.... ....|+||
T Consensus        49 G~sn~ty~l~~~~~~~~~~~VLR~~p~~~~-----~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         49 GQSNPTFLLEVGNGGSVKRYVLRKKPPGKL-----LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             CCcCceEEEEECCCCcceeEEEEeCCCCcc-----CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            677889987654322  4688887543210     111224578999999885 77776566665543221 12458999


Q ss_pred             eeeeCCCC
Q psy11822        129 EVTRRSQY  136 (229)
Q Consensus       129 e~~~~~~l  136 (229)
                      ||++|..+
T Consensus       124 E~v~G~~~  131 (822)
T PLN02876        124 EYLEGRIF  131 (822)
T ss_pred             EecCCccc
Confidence            99998753

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.01  E-value=2.4e-06  Score=66.62  Aligned_cols=77  Identities=10%  Similarity=-0.014  Sum_probs=45.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc-ccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC-NNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~-~~~~~~~lv~e~  130 (229)
                      .|..+.||+.....  ..+++|.....        .....+.+|..+++.+....+..+.++.+... ......+++|++
T Consensus         7 ~G~~n~~~~v~~~~--~~~vlK~~~~~--------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    7 GGFSNRVYRVTTDD--GRYVLKFYRPP--------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             ESSSSEEEEEEETT--SEEEEEEESSH--------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred             CCCeeeEEEEEECC--cEEEEEEeCCC--------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence            37778899998653  59999987654        11123356677777665443433344432211 112235889999


Q ss_pred             eeCCCCCc
Q psy11822        131 TRRSQYTG  138 (229)
Q Consensus       131 ~~~~~l~~  138 (229)
                      +++..+..
T Consensus        77 i~g~~~~~   84 (239)
T PF01636_consen   77 IPGRPLDD   84 (239)
T ss_dssp             ESSEEHHH
T ss_pred             eccccccc
Confidence            99887544

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.99  E-value=1e-05  Score=60.10  Aligned_cols=122  Identities=25%  Similarity=0.229  Sum_probs=84.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+.|.||+|.+.  |..+|+|+-..+        .....++.|+++|..+...++. +.++.|...      ++.|||++
T Consensus        33 G~~s~Vyl~~~~--~~~~a~Kvrr~d--------s~r~~l~kEakiLeil~g~~~~-p~vy~yg~~------~i~me~i~   95 (201)
T COG2112          33 GTTSVVYLGEWR--GGEVALKVRRRD--------SPRRNLEKEAKILEILAGEGVT-PEVYFYGED------FIRMEYID   95 (201)
T ss_pred             ccccEEEEeecc--CceEEEEEecCC--------cchhhHHHHHHHHHHhhhcCCC-ceEEEechh------hhhhhhhc
Confidence            999999999986  779999985442        2334668889988888766653 455555432      46699999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCC--CCeeeeCCCCCCccEEEeecCcceec
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKP--ENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp--~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      |-.|...-..      .    -.+-...+++.---|-..||-|..|.-  .||++    + ...+-|+||..|+.-
T Consensus        96 G~~L~~~~~~------~----~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv----~-~~~~~iIDFd~At~k  156 (201)
T COG2112          96 GRPLGKLEIG------G----DRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV----N-DRDVYIIDFDSATFK  156 (201)
T ss_pred             Ccchhhhhhc------c----cHHHHHHHHHHHHHHHHhccchhhhcCCceeEEe----c-CCcEEEEEccchhhc
Confidence            9876655332      1    134455666664456678999999975  45555    2 238999999999844

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.98  E-value=2.7e-05  Score=61.30  Aligned_cols=33  Identities=30%  Similarity=0.436  Sum_probs=26.2

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      .+++|+|+.++||++    +.+...-|+||+.+..-+
T Consensus       164 ~~l~HGD~~~~Nvlv----~~~~i~giIDw~~a~~gD  196 (235)
T cd05155         164 PVWFHGDLAPGNLLV----QDGRLSAVIDFGCLGVGD  196 (235)
T ss_pred             ceEEeCCCCCCcEEE----ECCCEEEEEeCcccCcCC
Confidence            348999999999999    554456799999886543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0576|consensus

Probab=97.92  E-value=2.9e-06  Score=73.99  Aligned_cols=149  Identities=14%  Similarity=0.042  Sum_probs=102.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      +.++.+++.+...+...+ .+.+...           ....-++++|.+++|||-.   +.++.+.......+++|+++.
T Consensus       253 ~altknpKkRptaeklL~-h~fvs~~-----------l~~rl~~eLLdK~n~P~~~---v~~~~d~~~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  253 GALTKNPKKRPTAEKLLQ-HPFVSQT-----------LSRRLAIELLDKVNNPNPV---VRYLEDYDGEDYLWIPMRICS  317 (829)
T ss_pred             HHhcCCCccCCChhhhee-ceeeccc-----------hhhHHHHHHHHHccCCCCc---ccccccCCcccccchhhhhhc
Confidence            667888998876665544 6655442           1224567889999999943   333333333456789999999


Q ss_pred             CCC--CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        133 RSQ--YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       133 ~~~--l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++.  .......   .-.+...+...+.+.-+.++++||+-.=+|||    ||+.+     ++..+..||+....+... 
T Consensus       318 ~~rs~~~~~~~s---e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s-----~~~~~~~~~~v~~~L~~~~  385 (829)
T KOG0576|consen  318 TGRSSALEMTVS---EIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS-----EEEVKLLDFAVPPQLTRTM  385 (829)
T ss_pred             CCccccccCChh---hHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc-----ccccccccccCCcccCccc
Confidence            882  2222222   22344445566778888999999998778998    88862     358899999998877664 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+...+|+.++|||+...
T Consensus       386 ~~~t~~~~~~~~~pev~~~  404 (829)
T KOG0576|consen  386 KPRTAIGTPEPLAPEVIQE  404 (829)
T ss_pred             ccccCCCCCCCCCchhhcc
Confidence            4467899999999997653

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.75  E-value=6.8e-05  Score=59.79  Aligned_cols=31  Identities=26%  Similarity=0.378  Sum_probs=25.6

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      .++|+|+.|+||++    +.++ +.|+||+.|..-.
T Consensus       147 ~l~H~Dl~~~Nil~----~~~~-~~lIDwE~a~~gd  177 (256)
T TIGR02721       147 APLHMDVHAYNLVV----TPQG-LKLIDWEYASDGD  177 (256)
T ss_pred             eeecCCCCcCcEEE----eCCC-CEEEeccccCcCC
Confidence            48999999999999    5544 7899999987544

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.61  E-value=0.00052  Score=52.45  Aligned_cols=39  Identities=36%  Similarity=0.525  Sum_probs=33.9

Q ss_pred             chHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       156 ~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +=+.++.+-+..+|+.||+=+|+++.|..     +    =||+|||.+
T Consensus       168 ~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~----G~lvDfs~~  206 (207)
T PF13095_consen  168 RDIPQMLRDLKILHKLGIVPRDVKPRNYR-----G----GKLVDFSSS  206 (207)
T ss_pred             hHHHHHHHHHHHHHHCCeeeccCcccccc-----C----CEEEecccC
Confidence            45778999999999999999999999987     2    389999975

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.58  E-value=0.00017  Score=56.62  Aligned_cols=33  Identities=30%  Similarity=0.371  Sum_probs=27.2

Q ss_pred             CCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCc
Q psy11822        172 GLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~  208 (229)
                      +++|+|+.++|||+    +. +..+.|+||..|..-.+
T Consensus       171 ~l~H~Dl~~~Nil~----~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         171 VFCHNDLLSGNIIY----NEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEcCCCCcCcEEE----eCCCCCEEEEEcccCCcCch
Confidence            58999999999999    54 35799999998875443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2270|consensus

Probab=97.57  E-value=0.0001  Score=61.02  Aligned_cols=140  Identities=19%  Similarity=0.227  Sum_probs=88.0

Q ss_pred             ceeeeeeecCCCCcEEEEehhhHHHH--------------------HHHHHhhhhhhhhccccccccccCccccceehhh
Q psy11822         55 IGQVNVPTDLEGGELLAEKADRREFI--------------------DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVD  114 (229)
Q Consensus        55 fg~Vy~a~~~~~~~~vaiK~~~~~~~--------------------~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~  114 (229)
                      =+-||-|+. .+|..+|||+.+.+-.                    ....+....-=+..|++-|.+++...|..+.-+.
T Consensus       157 EANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~PePIl  235 (520)
T KOG2270|consen  157 EANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCPEPIL  235 (520)
T ss_pred             cceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCcee
Confidence            355999985 5688899998553100                    0000010001125677777777665553211111


Q ss_pred             hhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHH-HHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        115 YAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       115 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~L-H~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                         .   ..-.|||+|+....+..=   ....-.++...+..+-.|++.-+.-| |.+++||.||+-=|+|+    . +|
T Consensus       236 ---L---k~hVLVM~FlGrdgw~aP---kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly----h-dG  301 (520)
T KOG2270|consen  236 ---L---KNHVLVMEFLGRDGWAAP---KLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY----H-DG  301 (520)
T ss_pred             ---e---ecceEeeeeccCCCCcCc---ccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE----E-CC
Confidence               1   123789999986553322   11233577777778888888877777 46889999999999998    2 45


Q ss_pred             cEEEeecCcceecCcc
Q psy11822        194 RVKVIDFGSASHVSKA  209 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~  209 (229)
                      .+.|+|.+-|...+.+
T Consensus       302 ~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  302 KLYIIDVSQSVEHDHP  317 (520)
T ss_pred             EEEEEEccccccCCCh
Confidence            9999999998766543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.56  E-value=7.7e-05  Score=56.68  Aligned_cols=103  Identities=17%  Similarity=0.174  Sum_probs=71.9

Q ss_pred             hccccccccccCccccceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH--
Q psy11822         93 ERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ--  170 (229)
Q Consensus        93 ~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~--  170 (229)
                      ..|.-+++.+.+.. ..+.++++  |+.    +++.||.+.+++............-+|..+.+|+.++++.+.+|+.  
T Consensus         7 ~~E~lll~~l~~~~-~~pk~lG~--CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~   79 (188)
T PF12260_consen    7 NNEPLLLQLLQGSE-PFPKLLGS--CGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGP   79 (188)
T ss_pred             ccHHHHHHHcCCCC-CCCCeeeE--CCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            45666777776532 22344433  442    6899999987653221110111235777889999999999999987  


Q ss_pred             -CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 -LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 -~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                       ..+.-.|++|+|+-+    +.++.+|++|...+...
T Consensus        80 ~~~~~lcDv~~~nfgv----~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   80 LGFFYLCDVSPDNFGV----NDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             CCcEEEeecchHHeEE----eCCCcEEEEechhcchh
Confidence             347779999999999    77789999999987654

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.54  E-value=0.00022  Score=57.96  Aligned_cols=32  Identities=38%  Similarity=0.419  Sum_probs=26.7

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      .+++|+|+.|+||++    +.+..+.|+||+.+..-
T Consensus       175 ~~l~HgD~~~~Nil~----~~~~~~~iIDfe~a~~g  206 (296)
T cd05153         175 RGVIHADLFRDNVLF----DGDELSGVIDFYFACTD  206 (296)
T ss_pred             CcCCccCcCcccEEE----eCCceEEEeehhhhcCc
Confidence            469999999999999    65556789999987643

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2137|consensus

Probab=97.32  E-value=0.00013  Score=64.32  Aligned_cols=66  Identities=21%  Similarity=0.289  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-----------cceeecccCCCCccc
Q psy11822        159 LQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-----------NTYLQSRYYRAPEII  226 (229)
Q Consensus       159 ~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-----------~~~~gt~~y~aPE~l  226 (229)
                      .+++.|+.|+|. .++||++|.|++|.+    +..+.+||+.|+.+....++..           ....-...|.|||++
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~----na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~  181 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVV----NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL  181 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheee----ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence            344499999995 689999999999999    9999999999998766544210           112334569999998


Q ss_pred             cC
Q psy11822        227 LG  228 (229)
Q Consensus       227 ~~  228 (229)
                      .+
T Consensus       182 ~~  183 (700)
T KOG2137|consen  182 LG  183 (700)
T ss_pred             cc
Confidence            64

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.30  E-value=0.00041  Score=58.71  Aligned_cols=80  Identities=16%  Similarity=0.073  Sum_probs=45.4

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHH-HHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDL-LKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      ..|.+..||++.+..+++.++||.-.+..... .......++...|.+.|+.+. +.....+.++.+.    ....++||
T Consensus        35 ggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D----~~~~~lVM  110 (401)
T PRK09550         35 GDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD----EELAVTVM  110 (401)
T ss_pred             CCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC----CCCCEEEE
Confidence            34889999999986444689999854321100 001123445567777777652 2222223444332    23357999


Q ss_pred             eeeeCC
Q psy11822        129 EVTRRS  134 (229)
Q Consensus       129 e~~~~~  134 (229)
                      ||+++.
T Consensus       111 E~L~~~  116 (401)
T PRK09550        111 EDLSDH  116 (401)
T ss_pred             ecCCCc
Confidence            999863

>PRK10593 hypothetical protein; Provisional

Probab=97.23  E-value=0.0006  Score=55.69  Aligned_cols=75  Identities=11%  Similarity=-0.045  Sum_probs=45.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhcc-cccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCN-NVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~-~~~~~~lv~e  129 (229)
                      .|..+.||+....  +..+.+|..+..        .....+.+|+..|+.+.-. .+..+.++..+... .....++|||
T Consensus        24 ~G~~~~vy~~~~~--~~~~~~k~~~~~--------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         24 EQPYAALWALYDS--QGNPMPLMARSF--------STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             CccceeEEEEEcC--CCCEEEEEeccc--------ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            4889999998743  235777764321        0122457788888777432 34445555443322 1233589999


Q ss_pred             eeeCCCC
Q psy11822        130 VTRRSQY  136 (229)
Q Consensus       130 ~~~~~~l  136 (229)
                      ++++.++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998653

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.16  E-value=0.00082  Score=56.62  Aligned_cols=100  Identities=12%  Similarity=0.089  Sum_probs=71.7

Q ss_pred             cceeeeeeeCCC-CCccCCCC---CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEee
Q psy11822        124 SVQMMEVTRRSQ-YTGATAPP---PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID  199 (229)
Q Consensus       124 ~~lv~e~~~~~~-l~~~~~~~---~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~D  199 (229)
                      ..++|+.+++.. ...+....   -......|.-+++.++.++.+.+-||..|..-+|+.++|+|+    +..+.|.|.|
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV----sd~~~V~LVd  160 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV----SDDSKVVLVD  160 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee----ecCceEEEEc
Confidence            567888888765 22221111   112235556677889999999999999999999999999999    6666899888


Q ss_pred             cCcceecCc-ccccceeecccCCCCcccc
Q psy11822        200 FGSASHVSK-AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       200 Fg~a~~~~~-~~~~~~~gt~~y~aPE~l~  227 (229)
                      =..-..... ......+|.+.|.+||.-+
T Consensus       161 sDsfqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         161 SDSFQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             ccceeeccCCceEecccCccccCCHHHhc
Confidence            664333332 3456789999999999754

>KOG2268|consensus

Probab=97.04  E-value=0.00087  Score=54.83  Aligned_cols=136  Identities=21%  Similarity=0.248  Sum_probs=83.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhH--HHHHHHH-------------Hhh-hhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRR--EFIDLLK-------------RML-TMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~--~~~~~~~-------------~~~-~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |.=+-||.+-+ ..|.+.++|.-+.  .+.....             +.. .+-...+|...|+.|.......+..++  
T Consensus       103 GKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpVPkpiD--  179 (465)
T KOG2268|consen  103 GKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPVPKPID--  179 (465)
T ss_pred             ccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCCCCccc--
Confidence            33345999986 4689999996221  1110000             000 111346677777776332222223222  


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                          ....++|||++.+-.+.+...-         ..+..+...+..-|--|..+|+||+|..-=||++    ..+..++
T Consensus       180 ----~~RH~Vvmelv~g~Pl~~v~~v---------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv----~dd~~i~  242 (465)
T KOG2268|consen  180 ----HNRHCVVMELVDGYPLRQVRHV---------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMV----KDDDKIV  242 (465)
T ss_pred             ----ccceeeHHHhhcccceeeeeec---------CChHHHHHHHHHHHHHHHHcCceecccchheeEE----ecCCCEE
Confidence                2335789999999887665332         1223455566666677889999999999999999    6677999


Q ss_pred             EeecCcceecCc
Q psy11822        197 VIDFGSASHVSK  208 (229)
Q Consensus       197 l~DFg~a~~~~~  208 (229)
                      ++||=-....+.
T Consensus       243 vIDFPQmvS~sh  254 (465)
T KOG2268|consen  243 VIDFPQMVSTSH  254 (465)
T ss_pred             EeechHhhccCC
Confidence            999986655443

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.01  E-value=0.0016  Score=49.87  Aligned_cols=140  Identities=15%  Similarity=0.105  Sum_probs=75.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHH----------HHHHHhhhhhhhhcccccccccc-Cccccc---eehhhhhhc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFI----------DLLKRMLTMDQVERRITPGEALN-HAFVTL---AHLVDYAHC  118 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~----------~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~---~~~~~~~~~  118 (229)
                      |+.-.||.--   ......||+..+...          ..........+..+|+.-...+. ..++..   ...++..+ 
T Consensus        12 G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~ve-   87 (199)
T PF10707_consen   12 GGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVE-   87 (199)
T ss_pred             CCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEEe-
Confidence            4444556543   344567777665430          00000111234455665555554 443332   23333333 


Q ss_pred             ccccccceeeeeeeCCC------CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC
Q psy11822        119 NNVKASVQMMEVTRRSQ------YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP  192 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~------l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~  192 (229)
                       ++...-+|+|.+.+.+      |..+...    ..++.    .+...+-+=.+||-+.+|+.+|++|+||++...++..
T Consensus        88 -T~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~----~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~  158 (199)
T PF10707_consen   88 -TNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE----ELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE  158 (199)
T ss_pred             -cCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH----HHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence             4444578888876543      3333221    22332    3334444445677789999999999999998875555


Q ss_pred             ccEEEee-cCccee
Q psy11822        193 YRVKVID-FGSASH  205 (229)
Q Consensus       193 ~~~kl~D-Fg~a~~  205 (229)
                      ..+.|+| ||....
T Consensus       159 ~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  159 FRLVLIDGLGEKEL  172 (199)
T ss_pred             eEEEEEeCCCCccc
Confidence            5777777 555443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.95  E-value=0.0058  Score=49.37  Aligned_cols=32  Identities=31%  Similarity=0.552  Sum_probs=25.4

Q ss_pred             CccccCCCCCeeeeCCCCCCcc-EEEeecCcceecCc
Q psy11822        173 LIHADLKPENIMLVDPVRQPYR-VKVIDFGSASHVSK  208 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~~~~~-~kl~DFg~a~~~~~  208 (229)
                      ++|+|++|+||++    +.++. .-|+||+.+..-++
T Consensus       187 lvHGD~~~~Nilv----~~~~~~~gviDWe~a~iGDP  219 (276)
T cd05152         187 LVHGDLHPGHILI----DEDARVTGLIDWTEAKVGDP  219 (276)
T ss_pred             eEeCCCCCCcEEE----eCCCCEEEEECcHhcccCCH
Confidence            7999999999999    54334 56999999876543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=96.46  E-value=0.0037  Score=53.39  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=24.7

Q ss_pred             CccccCCCCCeeeeCCCC-CCccEEEeecCcceecC
Q psy11822        173 LIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVS  207 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~  207 (229)
                      ++|+||.++|||+....+ ..--..|+||-.+...+
T Consensus       270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~  305 (414)
T PF07914_consen  270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGS  305 (414)
T ss_pred             eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCc
Confidence            689999999999965322 11255688988776543

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.44  E-value=0.0014  Score=54.52  Aligned_cols=76  Identities=14%  Similarity=0.076  Sum_probs=43.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHH-HHHHhhhhhhhhcccccccccc--Cccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFID-LLKRMLTMDQVERRITPGEALN--HAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~~~~Ei~~l~~l~--h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |...-||++.+..+++.++||.-.+.... ........++...|...|+...  -|.. .+.++.+    +.....+|||
T Consensus         6 GnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~-vP~vy~~----D~e~~~~vME   80 (370)
T TIGR01767         6 GNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHL-VPRIFHF----DTEMAVTVME   80 (370)
T ss_pred             CceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccc-cCeEEEE----ccccceehHh
Confidence            66788999997544478999985543221 1122334555567777775542  1221 2333322    2334568999


Q ss_pred             eeeC
Q psy11822        130 VTRR  133 (229)
Q Consensus       130 ~~~~  133 (229)
                      +++.
T Consensus        81 dL~~   84 (370)
T TIGR01767        81 DLSH   84 (370)
T ss_pred             hCcc
Confidence            9965

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.34  E-value=0.026  Score=46.38  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=27.1

Q ss_pred             CccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ++|+|+.+.|+++    +....+-++||+++..-++
T Consensus       200 lvHGD~~~gNlii----~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         200 LVHGDYRPGNLII----DPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             eeeCCcccCCEEE----eCCCeeEEEeccccccCCc
Confidence            6999999999999    5555699999999976544

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.29  E-value=0.0014  Score=55.30  Aligned_cols=76  Identities=8%  Similarity=-0.090  Sum_probs=45.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc--Cccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN--HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |...-||++.+..+++.|+||.-.+............++...|.+.|+.+.  -|..+ +.++.+    +.....+|||+
T Consensus        40 GnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~V-P~vy~~----D~e~~~~vMEd  114 (409)
T PRK12396         40 GNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLV-PKVYLF----DSVMNCCVMED  114 (409)
T ss_pred             CceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcC-CeEEEE----CcHHhhHHHHh
Confidence            667889999974446789999855433322233445566677777777652  22222 333322    33345789999


Q ss_pred             eeC
Q psy11822        131 TRR  133 (229)
Q Consensus       131 ~~~  133 (229)
                      ++.
T Consensus       115 L~~  117 (409)
T PRK12396        115 LSD  117 (409)
T ss_pred             Ccc
Confidence            964

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.02  E-value=0.011  Score=48.37  Aligned_cols=31  Identities=42%  Similarity=0.558  Sum_probs=26.5

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      .+++|+|+.++||++    +.++.+.|+||+.+..
T Consensus       187 ~~l~HgD~~~~Nvl~----~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       187 RGVIHADLFPDNVLF----DGDSVKGVIDFYFACT  217 (307)
T ss_pred             CccCCCCCCcCcEEE----ECCceEEEeecccccC
Confidence            679999999999999    5555678999999854

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.94  E-value=0.0074  Score=49.02  Aligned_cols=71  Identities=13%  Similarity=0.150  Sum_probs=37.2

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      ..|....+|+..  .+++.+-+|+-...         ....+..|+.-|+.|. -..+..+..+......+  ..++|||
T Consensus        26 ~GG~i~~a~~~~--~~~~~~FvK~~~~~---------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~--~~fLlle   92 (288)
T PF03881_consen   26 SGGDINEAYRLD--TDGGSYFVKVNSES---------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD--DAFLLLE   92 (288)
T ss_dssp             --SSSSEEEEEE--TTS-EEEEEEEEGG---------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS--CCEEEEE
T ss_pred             CCCChhheEEEE--CCCccEEEEecChh---------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC--CceEEEE
Confidence            348888999887  55889999975431         2234566777777662 22233344444443322  2489999


Q ss_pred             eeeCC
Q psy11822        130 VTRRS  134 (229)
Q Consensus       130 ~~~~~  134 (229)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            99877

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK05231 homoserine kinase; Provisional

Probab=95.80  E-value=0.0073  Score=49.69  Aligned_cols=32  Identities=34%  Similarity=0.417  Sum_probs=26.0

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      .++||+|+.|+||++    +.+...-|+||+.+..-
T Consensus       187 ~~liHgD~~~~Nil~----~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        187 RGVIHADLFRDNVLF----EGDRLSGFIDFYFACND  218 (319)
T ss_pred             cccCCCCCCCCcEEE----ECCceEEEEecccccCC
Confidence            479999999999999    54445589999988643

>KOG1290|consensus

Probab=95.68  E-value=0.0053  Score=52.47  Aligned_cols=37  Identities=46%  Similarity=0.758  Sum_probs=29.1

Q ss_pred             CccEEEeecCcceecCcccccceeecccCCCCccccCC
Q psy11822        192 PYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .-.|||+|||.|.-..... +....|..|+|||++.|.
T Consensus       390 di~vKIaDlGNACW~~khF-T~DIQTRQYRapEVllGs  426 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHF-TEDIQTRQYRAPEVLLGS  426 (590)
T ss_pred             ceeEEEeeccchhhhhhhh-chhhhhhhccCcceeecC
Confidence            3499999999998665433 445778899999999873

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.65  E-value=0.018  Score=47.11  Aligned_cols=30  Identities=37%  Similarity=0.537  Sum_probs=25.1

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      .+++|+|+.++||++    +. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~----~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILL----KD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEE----eC-CcEEEEECccccc
Confidence            578999999999999    54 4688999997653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.13  E-value=0.017  Score=43.72  Aligned_cols=32  Identities=19%  Similarity=0.308  Sum_probs=26.1

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ..+|+|+.|+|+++    +.++ ++|+||+.|..-++
T Consensus        78 ~p~H~D~~~~N~~~----~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVH----SASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEE----ECCC-EEEEeCCcccCCCH
Confidence            36999999999998    5555 88999999875543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.08  E-value=0.016  Score=47.30  Aligned_cols=37  Identities=32%  Similarity=0.501  Sum_probs=27.5

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +++|+|+.|.||++..+....+.+.++||..|..-.+
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p  216 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR  216 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence            4799999999999932111136899999999876543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1234|consensus

Probab=95.06  E-value=0.017  Score=46.23  Aligned_cols=141  Identities=16%  Similarity=0.234  Sum_probs=83.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhH------------------------------HHHHHHHHhhhh-hhhhcccccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRR------------------------------EFIDLLKRMLTM-DQVERRITPGEA  101 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~------------------------------~~~~~~~~~~~~-~~~~~Ei~~l~~  101 (229)
                      -+.|+|++|+.. +|..||+|+--+                              ......++.... ...++|+....+
T Consensus        60 ASIGQVHrArl~-~g~eVavKiQYPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~k  138 (363)
T KOG1234|consen   60 ASIGQVHRARLA-DGPEVAVKIQYPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALK  138 (363)
T ss_pred             ccHHHHHHHHhc-CCCeeeeecCCCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhh
Confidence            567999999965 589999998111                              000111111111 124666666555


Q ss_pred             c-----cCccccceehhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHH-HHHHHHHCCCcc
Q psy11822        102 L-----NHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLT-ALLKLKQLGLIH  175 (229)
Q Consensus       102 l-----~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~-gl~~LH~~~iiH  175 (229)
                      +     .+||.-.+.+++.....    ..+.||++.|-.++...       .++.+..-.|..+++. .|+-+-.-...-
T Consensus       139 Fr~LLs~~p~f~VP~Vv~Elct~----rvlt~el~~G~pid~~~-------~~sQ~~rn~i~~~~l~lcLrEif~f~fMQ  207 (363)
T KOG1234|consen  139 FRPLLSDDPNFYVPRVVDELCTV----RVLTLELGQGLPIDKTA-------KLSQETRNYIGYKLLELCLREIFEFRFMQ  207 (363)
T ss_pred             hHHHhcCCCCcchhHHHHhhccc----hhhhhhhhcCccchhhh-------cccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            4     37776444555443322    36789998887766552       2444444445555543 445554445556


Q ss_pred             ccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       176 rDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      .|-.=+|+|.-   .....+.|.|||-++.++.
T Consensus       208 TDPNWsNFly~---~~tk~i~LlDFGAsr~y~~  237 (363)
T KOG1234|consen  208 TDPNWSNFLYN---GRTKKIELLDFGASREYGE  237 (363)
T ss_pred             CCCCHHHhccC---CCcceEEEEeccccccccH
Confidence            77777999982   2344899999999987753

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.01  E-value=0.023  Score=48.37  Aligned_cols=30  Identities=30%  Similarity=0.373  Sum_probs=23.7

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ..++|+|+.|+|||+    +.+ ..+++|...+.-
T Consensus       230 ~~L~HGDl~~g~i~~----~~~-~~~~id~ef~~~  259 (418)
T PLN02756        230 QALVHGDLHTGSVMV----TPD-STQVIDPEFAFY  259 (418)
T ss_pred             cceeecCCCCCcEEE----cCC-CceEecchhhcc
Confidence            358999999999999    443 488999886653

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=94.91  E-value=0.016  Score=52.78  Aligned_cols=52  Identities=17%  Similarity=0.233  Sum_probs=35.9

Q ss_pred             ccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       174 iHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+++..|.+.++.   +.....++.|||.++.....    .....+||+.|||||++.+
T Consensus       499 ~~~~~~p~~~~~~---~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~  554 (669)
T cd05610         499 PTQKPRPHGNLYQ---TPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLG  554 (669)
T ss_pred             CCCCCCCCCceeE---CCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCC
Confidence            4567777644443   33346788999998776432    2345789999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1826|consensus

Probab=94.76  E-value=0.003  Score=61.21  Aligned_cols=128  Identities=12%  Similarity=-0.088  Sum_probs=84.9

Q ss_pred             hccccccccccCccccceehhhhhhcccccccceeeeeeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC
Q psy11822         93 ERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL  171 (229)
Q Consensus        93 ~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~  171 (229)
                      ..|..-++...|+++.  +.+.-....+....|..++|+.+|. +..++....+...+.+.-+.....+.+.+..-+|+.
T Consensus      1277 l~e~de~~~~~h~~~~--~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTE--VDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred             hhhhhhhhhhhceeee--cccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence            3344445566888875  2233333444455689999999998 555555444444455444444444447777777752


Q ss_pred             -----CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--cccceeecccCCCCccc
Q psy11822        172 -----GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEII  226 (229)
Q Consensus       172 -----~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~~~~~~gt~~y~aPE~l  226 (229)
                           ..+|+++|+-|.++    ..+..++++++|+.++..+.  ......+++.|++|++.
T Consensus      1355 tnlg~T~v~~~Lkf~lpmI----Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~ 1412 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMI----VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIK 1412 (2724)
T ss_pred             ccCCccchhhhhhhhccce----ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHH
Confidence                 37999999999999    77779999999999955443  34556777778877754

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.46  E-value=0.075  Score=41.66  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=44.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcc-ccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAF-VTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-i~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|..-+.|...+-  ..++-+|+-..+.         ...|..|+.-|..|.-.| |..+.++...  ......|+||||
T Consensus        26 gG~inea~~v~dg--~~~~FvK~n~~~~---------~~~f~AEa~gL~~la~s~ti~VP~vi~~G--~~~~~sylVle~   92 (286)
T COG3001          26 GGDINEAWRLRDG--TDPFFVKCNQREQ---------LSMFTAEADGLELLARSNTITVPKVIAVG--ASRDHSYLVLEY   92 (286)
T ss_pred             CccccceeEeecC--CcceEEEecchhh---------HHHHHHHHHHHHHHHhcCCccccceEEec--CCCCeeEEEEee
Confidence            3666666666543  5678899755432         224466666666664444 5444554333  344567999999


Q ss_pred             eeCCCCC
Q psy11822        131 TRRSQYT  137 (229)
Q Consensus       131 ~~~~~l~  137 (229)
                      ++.+.++
T Consensus        93 L~~~~~d   99 (286)
T COG3001          93 LPTGPLD   99 (286)
T ss_pred             ccCCCCC
Confidence            9986544

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.36  E-value=0.032  Score=42.63  Aligned_cols=38  Identities=34%  Similarity=0.306  Sum_probs=28.1

Q ss_pred             CCCccccCCCCCeeeeCCCC-CCccEEEeecCcceecCc
Q psy11822        171 LGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~~  208 (229)
                      ..++|+|+.+.||++..+.+ ....+.|+||..+..-++
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p  158 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP  158 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence            46899999999999943211 112789999999876544

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.34  E-value=0.086  Score=43.71  Aligned_cols=45  Identities=33%  Similarity=0.551  Sum_probs=33.9

Q ss_pred             hHHHHHHHHHHHHH-------C-C--CccccCCCCCeeeeCCCCCCc-cEEEeecCccee
Q psy11822        157 VTLQVLTALLKLKQ-------L-G--LIHADLKPENIMLVDPVRQPY-RVKVIDFGSASH  205 (229)
Q Consensus       157 i~~qi~~gl~~LH~-------~-~--iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~  205 (229)
                      ...++...++.+.+       . +  +||+|+.|+||++    +.+. .+.++||+.+..
T Consensus       173 l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~----d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         173 LRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLF----DDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             hHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeE----cCCCCeeeEEEcccccc
Confidence            44566666666664       2 3  9999999999999    6655 488999998753

>KOG1236|consensus

Probab=93.95  E-value=0.088  Score=44.77  Aligned_cols=60  Identities=23%  Similarity=0.161  Sum_probs=34.9

Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH-HCCCccccCCCCCeeeeCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDP  188 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH-~~~iiHrDlkp~Nil~~~~  188 (229)
                      .++=+|..|-+...+...    ...+++...+++.-.++|+--|- -.+.+|.|+.|+||++.-.
T Consensus       321 vl~E~~~~Gl~v~~~v~~----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKW----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             eeeeeccccccHHhhhhc----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            344445555445444443    12333334455555555655543 4579999999999999543

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=93.84  E-value=0.038  Score=45.75  Aligned_cols=36  Identities=33%  Similarity=0.624  Sum_probs=26.9

Q ss_pred             CCCccccCCCCCeeeeCCCC--------------CCccEEEeecCcceec
Q psy11822        171 LGLIHADLKPENIMLVDPVR--------------QPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~--------------~~~~~kl~DFg~a~~~  206 (229)
                      ...+|-||||+|||+.....              +.-.++|-||.+|+.-
T Consensus       298 ~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  298 TNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVA  347 (434)
T ss_pred             ceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhc
Confidence            35899999999999976421              2346788889888654

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.80  E-value=0.068  Score=43.03  Aligned_cols=32  Identities=28%  Similarity=0.344  Sum_probs=27.9

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      -++|.|+.|+|++.    +..+.++|+||..|..-+
T Consensus       154 v~cH~Dl~~~N~l~----t~~~~l~LIDWEyAg~~D  185 (269)
T COG0510         154 VPCHNDLNPGNLLL----TDKGGLFLIDWEYAGLND  185 (269)
T ss_pred             eeecCCCCccceEE----cCCCcEEEEecccCCCcc
Confidence            48999999999999    666799999999987554

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=93.42  E-value=0.091  Score=43.09  Aligned_cols=31  Identities=23%  Similarity=0.306  Sum_probs=27.5

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +++|+|+.++|+++    +.++.+.++||..+..-
T Consensus       197 ~lcHgD~~~~Nvl~----~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       197 VLVHGKLSLSHFLY----DETRGGYFINFEKASFA  227 (309)
T ss_pred             eeeCCCCcHHhEEE----cCCCCEEEEEhhhcccC
Confidence            69999999999999    77778999999988654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.31  E-value=0.12  Score=43.24  Aligned_cols=52  Identities=19%  Similarity=0.206  Sum_probs=42.2

Q ss_pred             ccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        150 VPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       150 ~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ..+++..|+++.+.-+.-+-.+ ..=|||+.-+|||+    + +|+|.|+||-+|+.-
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d-~GnvtLIDfklsRl~  371 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----D-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----e-cCceEEEEeeeeecc
Confidence            3456677888877777766654 57899999999999    7 789999999999844

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=92.89  E-value=0.092  Score=41.02  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=32.0

Q ss_pred             HHHHHHHHH--CCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        162 LTALLKLKQ--LGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       162 ~~gl~~LH~--~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      +.+|.-.|+  .+.+|+|..|+||+-    +..|.+||.|=+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~----D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMC----DKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheee----cCCCCEEecChhh
Confidence            566777884  469999999999999    9999999999875

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	229
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-09
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-09
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		2e-09
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		7e-09
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		7e-09
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-08
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		3e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		5e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		5e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		5e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		5e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		5e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		5e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		6e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		6e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		6e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		6e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		6e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		6e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		6e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		6e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		7e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-05
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		4e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		4e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		4e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		4e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		4e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		4e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		4e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		4e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		4e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		4e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		4e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		4e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		4e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		5e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		5e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		6e-05
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		6e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		8e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-04
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-04
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		1e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-04
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		4e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		4e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-04
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		7e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		8e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		8e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		9e-04

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L +P R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 181 IHCDLKPENILLCNPKRSA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L +P R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 162 IHCDLKPENILLCNPKRSA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 213

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L +P R    +K++DFGS+  + + +    +QSR+YR+PE++LG
Sbjct: 181 IHCDLKPENILLCNPKRXA--IKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L    R    +KVIDFGS+ +  + V  T +QSR+YRAPE+ILG
Sbjct: 222 IHCDLKPENILLKQQGRSG--IKVIDFGSSCYEHQRV-YTXIQSRFYRAPEVILG 273

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L    R    +KVIDFGS+ +  + V  T +QSR+YRAPE+ILG
Sbjct: 222 IHCDLKPENILLKQQGRS--GIKVIDFGSSCYEHQRV-YTXIQSRFYRAPEVILG 273

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKPENI+L    R    +KVIDFGS+ +  + V    +QSR+YRAPE+ILG
Sbjct: 222 IHCDLKPENILLKQQGRS--GIKVIDFGSSCYEHQRVYXX-IQSRFYRAPEVILG 273

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 141 IHRDLKPSNIV----VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A   S     T Y+ +RYYRAPE+ILG
Sbjct: 146 IHRDLKPSNIV----VKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 181 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 179 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 173 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 224 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 186 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 150 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 183 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 153 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 149 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 147 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 141 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 142 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 158 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 186 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N +Y+ SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A +  +  +   Y+ +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 174 IHADLKPENIML--VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH D+KPEN+++  VD      ++K+ D G+A    +   N+ +Q+R YR+PE++LG
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLG 209

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 174 IHADLKPENIML--VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH D+KPEN+++  VD      ++K+ D G+A    +   N+ +Q+R YR+PE++LG
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSPEVLLG 209

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDXELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 158 IHRDLKPSNL----AVNEDXELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 206

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 152 IHRDLKPSNLA----VNEDXELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 201

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 152 IHRDLKPSNLA----VNEDXELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 201

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H +  +   Y+ +R+YRAPEI+L 
Sbjct: 154 IHRDLKPSNL----AVNEDCELKILDFGLARHTADEMTG-YVATRWYRAPEIMLN 203

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 153 IHRDLKPSNL----AVNEDSELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 202

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 149 IHRDLKPSNLA----VNEDSELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 198

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H +  +   Y+ +R+YRAPEI+L 
Sbjct: 154 IHRDLKPSNLA----VNEDCELKILDFGLARHTADEMTG-YVATRWYRAPEIMLN 203

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H +  +   Y+ +R+YRAPEI+L 
Sbjct: 154 IHRDLKPSNL----AVNEDCELKILDFGLARHTADEMTG-YVATRWYRAPEIMLN 203

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L  P      +K+IDFGSA  +     N + + SRYYRAPE+I G
Sbjct: 164 HRDIKPQNLLLDPPSGV---LKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFG 215

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 159 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 207

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 159 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 207

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 153 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 202

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 159 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 207

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 170 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 218

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 158 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 206

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 154 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 203

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP N+++ +       +K+ DFGSA  +S +  N  Y+ SRYYRAPE+I G
Sbjct: 154 HRDIKPHNVLVNE---ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 152 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 201

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 146 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 195

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 167 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 215

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 149 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 198

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 167 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 215

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 149 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 198

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 166 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 214

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 157 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 206

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 149 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 198

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 166 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 214

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 152 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 201

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 153 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 202

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 144 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 193

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 144 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 193

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 145 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIML 193

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 143 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 192

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 153 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 202

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 179 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +     ++ +RYYRAPE+ILG
Sbjct: 150 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 176 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 225

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L
Sbjct: 170 IHRDLKPSNL----AVNEDCELKILDFGLARHTDDEMXG-YVATRWYRAPEIML 218

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 143 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 192

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 143 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTG-YVATRWYRAPEIMLN 192

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 157 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 157 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 164 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 149 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 153 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 146 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN-TYLQSRYYRAPEIILG 228
           H D+KP+N++L DP      +K+ DFGSA  + +   N + + SRYYRAPE+I G
Sbjct: 145 HRDIKPQNLLL-DP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           +H DLKP N+     V +   +K++DFG A H + A    Y+ +R+YRAPE+IL
Sbjct: 166 VHRDLKPGNLA----VNEDCELKILDFGLARH-ADAEMTGYVVTRWYRAPEVIL 214

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           +H DLKP N+     V +   +K++DFG A H + A    Y+ +R+YRAPE+IL 
Sbjct: 148 VHRDLKPGNLA----VNEDCELKILDFGLARH-ADAEMTGYVVTRWYRAPEVILS 197

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T  + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   ++ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMAG-FVATRWYRAPEIMLN 196

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   ++ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMAG-FVATRWYRAPEIMLN 196

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +   ++ +R+YRAPEI+L 
Sbjct: 143 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMAG-FVATRWYRAPEIMLN 192

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEIILGE 229
           IH D+KPENI+    V Q   VK+ DFG A  ++    V +  + +R+YRAPE+++G+
Sbjct: 146 IHRDIKPENIL----VSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG   H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDSELKILDFGLCRHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 16/69 (23%)
Query: 175 HADLKPENIMLVDP---------VRQPYR------VKVIDFGSASHVSKAVCNTYLQSRY 219
           H DLKPENI+ V           +++  R      +KV+DFGSA++  +   +T + +R+
Sbjct: 141 HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-HSTLVSTRH 199
Query: 220 YRAPEIILG 228
           YRAPE+IL 
Sbjct: 200 YRAPEVILA 208

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++D+G A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDYGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 22/74 (29%)
Query: 175 HADLKPENIMLVDP--------VR--------QPYR-----VKVIDFGSASHVSKAVCNT 213
           H DLKPENI+L DP        VR        Q YR     +K+IDFG A+  S     +
Sbjct: 160 HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-YHGS 218
Query: 214 YLQSRYYRAPEIIL 227
            + +R YRAPE+IL
Sbjct: 219 IINTRQYRAPEVIL 232

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     + +    + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     + +    + +RYYRAPE+ILG
Sbjct: 148 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   ++++DFG A    + +   Y+ +R+YRAPEI+L
Sbjct: 153 IHRDLKPSNVA----VNEDSELRILDFGLARQADEEMTG-YVATRWYRAPEIML 201

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 16/69 (23%)
Query: 175 HADLKPENIMLVDP---------VRQPYR------VKVIDFGSASHVSKAVCNTYLQSRY 219
           H DLKPENI+ V           +++  R      +KV+DFGSA++  +   +T +  R+
Sbjct: 141 HTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-HSTLVXXRH 199
Query: 220 YRAPEIILG 228
           YRAPE+IL 
Sbjct: 200 YRAPEVILA 208

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   ++++DFG A    + +   Y+ +R+YRAPEI+L
Sbjct: 153 IHRDLKPSNVA----VNEDSELRILDFGLARQADEEMTG-YVATRWYRAPEIML 201

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++ FG A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILGFGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DFG A H    +    + +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMTGX-VATRWYRAPEIMLN 196

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH D+K  NI+L     +P  VK+ DFGSAS ++ A  N ++ + Y+ APE+IL 
Sbjct: 176 IHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--NXFVGTPYWMAPEVILA 224

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   +K++DFG A H    +    + +R+YRAPEI+L
Sbjct: 167 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDEMXGX-VATRWYRAPEIML 215

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIIL 227
           IH DLKP N+     V +   ++++DFG A    + +   Y+ +R+YRAPEI+L
Sbjct: 145 IHRDLKPSNVA----VNEDCELRILDFGLARQADEEMTG-YVATRWYRAPEIML 193

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH D+K  NI+L     +P  VK+ DFGSAS ++ A  N ++ + Y+ APE+IL 
Sbjct: 137 IHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--NXFVGTPYWMAPEVILA 185

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 16/68 (23%)
Query: 175 HADLKPENIMLVDPVRQ---------------PYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           H DLKPENI+ V+   +                  V+V+DFGSA+       +T + +R+
Sbjct: 160 HTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT-FDHEHHSTIVSTRH 218
Query: 220 YRAPEIIL 227
           YRAPE+IL
Sbjct: 219 YRAPEVIL 226

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++D G A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDAGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++DF  A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDFYLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++D G A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNLA----VNEDCELKILDGGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           IH DLKP N+     V +   +K++D G A H    +   Y+ +R+YRAPEI+L 
Sbjct: 147 IHRDLKPSNL----AVNEDCELKILDRGLARHTDDEMTG-YVATRWYRAPEIMLN 196

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEII 226
           +H DLKPEN++L    R    +K++DFG ++H          L + YY APE++
Sbjct: 126 VHRDLKPENLLLESKSRDAL-IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG 228
           IH D+K ENI+    + + + +K+IDFGSA+++ +  +  T+  +  Y APE+++G
Sbjct: 152 IHRDIKDENIV----IAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG 203

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTYLQSRYYRAPEII 226
           IH D+K +N++L +       VK++DFG ++ + + V   NT++ + Y+ APE+I
Sbjct: 151 IHRDIKGQNVLLTENAE----VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTYLQSRYYRAPEIILG 228
           +H DLKPEN++L    +    +++IDFG ++H   SK + +  + + YY APE++ G
Sbjct: 171 VHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDK-IGTAYYIAPEVLHG 225

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTYLQSRYYRAPEIILG 228
           +H DLKPEN++L    +    +++IDFG ++H   SK + +  + + YY APE++ G
Sbjct: 172 VHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDK-IGTAYYIAPEVLHG 226

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASH--VSKAVCNTYLQSRYYRAPEIILG 228
           +H DLKPEN++L    +    +++IDFG ++H   SK + +  + + YY APE++ G
Sbjct: 148 VHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDK-IGTAYYIAPEVLHG 202

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	229
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-30
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	8e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-29
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-12
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-29
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-09
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-29
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	9e-08
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-28
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	8e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-24
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-14
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-13
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-12
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-12
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-12
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-11
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-11
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-11
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-11
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-10
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-10
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-10
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-10
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-10
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-10
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-10
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	8e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-05
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	9e-08
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	9e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-07
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-07
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	8e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-06
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	9e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	9e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-05
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	9e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	7e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	8e-04

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  115 bits (290), Expect = 2e-30
 Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 3/72 (4%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
               +L  L  L +  +IH DLKPENI+L    R    +KVIDFGS+ +  + V  TY+Q
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG--IKVIDFGSSCYEHQRVY-TYIQ 261

Query: 217 SRYYRAPEIILG 228
           SR+YRAPE+ILG
Sbjct: 262 SRFYRAPEVILG 273

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 60.1 bits (146), Expect = 8e-11
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 13/96 (13%)

Query: 15  TSRFCHNWCYPRRAL--TKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAE 72
              F  +  YPR     T           +  R  +    +     N            +
Sbjct: 329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNA----------LK 378

Query: 73  KADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
             D   F+D LK+ L  D    R+TPG+AL H ++ 
Sbjct: 379 GCDDPLFLDFLKQCLEWDP-AVRMTPGQALRHPWLR 413

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  112 bits (281), Expect = 2e-29
 Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 5/74 (6%)

Query: 157 VTLQVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY 214
              Q+ TAL  L   +L +IH DLKPENI+L +P R    +K++DFGS+  + + +   Y
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA--IKIVDFGSSCQLGQRIY-QY 218

Query: 215 LQSRYYRAPEIILG 228
           +QSR+YR+PE++LG
Sbjct: 219 IQSRFYRSPEVLLG 232

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 34  LPETSIKSKEARKYIFNCLDDI--GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQ 91
           L +T    +E +      L +I   +   P     GE     AD  +F DL+ RML  D 
Sbjct: 302 LKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP 361

Query: 92  VERRITPGEALNHAFVT 108
            + RI P  AL H+F  
Sbjct: 362 -KTRIQPYYALQHSFFK 377

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  110 bits (277), Expect = 4e-29
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 16/88 (18%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDP---------------VRQPYRVKVIDF 200
            +  Q+  ++  L    L H DLKPENI+ V                       +KV+DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181

Query: 201 GSASHVSKAVCNTYLQSRYYRAPEIILG 228
           GSA++  +   +T + +R+YRAPE+IL 
Sbjct: 182 GSATYDDEHH-STLVSTRHYRAPEVILA 208

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 11/70 (15%)

Query: 40  KSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPG 99
           +   A +Y+      + +           +L++  +     DL+++ML  D   +RIT  
Sbjct: 276 EHSSAGRYVSRACKPLKEF----------MLSQDVEHERLFDLIQKMLEYDP-AKRITLR 324

Query: 100 EALNHAFVTL 109
           EAL H F  L
Sbjct: 325 EALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  110 bits (276), Expect = 8e-29
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 16/88 (18%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY---------------RVKVIDF 200
           ++  Q+  AL  L +  L H DLKPENI+ V+   +                  ++V DF
Sbjct: 127 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186

Query: 201 GSASHVSKAVCNTYLQSRYYRAPEIILG 228
           GSA+   +    T + +R+YR PE+IL 
Sbjct: 187 GSATFDHEHHT-TIVATRHYRPPEVILE 213

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 50.8 bits (122), Expect = 9e-08
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 69  LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           +L +  +  +  DL++RML  D   +RIT  EAL H F  
Sbjct: 300 MLQDSLEHVQLFDLMRRMLEFDP-AQRITLAEALLHPFFA 338

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  109 bits (275), Expect = 1e-28
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 22/94 (23%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY---------------------R 194
              +++L AL  L+++ L H DLKPENI+L DP  +                        
Sbjct: 141 LYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200

Query: 195 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
           +K+IDFG A+  S     + + +R YRAPE+IL 
Sbjct: 201 IKLIDFGCATFKSDYHG-SIINTRQYRAPEVILN 233

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 53.9 bits (130), Expect = 8e-09
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 18/92 (19%)

Query: 16  SRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKAD 75
           +   +   Y  +   K+  PE +  S  + K++  CL                 L +   
Sbjct: 286 ATKTNGSKYVNKDELKLAWPENA-SSINSIKHVKKCLP----------------LYKIIK 328

Query: 76  RREFIDLLKRMLTMDQVERRITPGEALNHAFV 107
              F D L  +L +D    R +P E L H F+
Sbjct: 329 HELFCDFLYSILQIDP-TLRPSPAELLKHKFL 359

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 97.9 bits (244), Expect = 4e-24
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 158 TLQVLTALLKL-KQLGLIHADLKPENIMLVDPVRQ--PYRVKVIDFGSASHVSKAVCNTY 214
           + Q+L  L  + ++ G+IH D+KPEN+++          ++K+ D G+A    +      
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-NS 195

Query: 215 LQSRYYRAPEIILG 228
           +Q+R YR+PE++LG
Sbjct: 196 IQTREYRSPEVLLG 209

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 72  EKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
            K + +E  D L  ML +D   +R   G  +NH ++ 
Sbjct: 303 SKDEAKEISDFLSPMLQLDP-RKRADAGGLVNHPWLK 338

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 72.8 bits (179), Expect = 3e-15
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+  +L  +   G+ H D+KP+N+ L+DP      +K+ DFGSA  + +   N  Y+ SR
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNL-LLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSR 220

Query: 219 YYRAPEIILG 228
           YYRAPE+I G
Sbjct: 221 YYRAPELIFG 230

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           E I L  R+L       R+TP EA  H+F
Sbjct: 312 EAIALCSRLLEYTP-TARLTPLEACAHSF 339

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 69.8 bits (171), Expect = 4e-14
 Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+  A+  +  LG+ H D+KP+N+ LV+   +   +K+ DFGSA  +  +  +  Y+ SR
Sbjct: 149 QLFRAVGFIHSLGICHRDIKPQNL-LVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSR 205

Query: 219 YYRAPEIILG 228
           +YRAPE++LG
Sbjct: 206 FYRAPELMLG 215

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 73  KADRREFIDLLKRMLTMDQVERRITPGEALNHAFV 107
           +      IDLL+++L  +  + RI P EA+ H F 
Sbjct: 292 EGTPSLAIDLLEQILRYEP-DLRINPYEAMAHPFF 325

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 69.3 bits (170), Expect = 5e-14
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 4/70 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L +L  +  +G+ H D+KP+N+ L+DP      +K+IDFGSA  +     N  Y+ SR
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNL-LLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSR 205

Query: 219 YYRAPEIILG 228
           YYRAPE+I G
Sbjct: 206 YYRAPELIFG 215

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 9/74 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
            +L A+  + Q G++H+DLKP N ++VD       +K+IDFG A+ +     +    S+ 
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVVKDSQV 189

Query: 219 ---YYRAPEIILGE 229
               Y  PE I   
Sbjct: 190 GTVNYMPPEAIKDM 203

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 9/73 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
            +L A+  + Q G++H+DLKP N ++VD       +K+IDFG A+ +     +    S+ 
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVVKDSQV 170

Query: 219 ---YYRAPEIILG 228
               Y  PE I  
Sbjct: 171 GTVNYMPPEAIKD 183

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 66.8 bits (163), Expect = 4e-13
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 9/74 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
            +L A+  + Q G++H+DLKP N ++VD       +K+IDFG A+ +     +    S+ 
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDG-----MLKLIDFGIANQMQPDTTSVVKDSQV 217

Query: 219 ---YYRAPEIILGE 229
               Y  PE I   
Sbjct: 218 GAVNYMPPEAIKDM 231

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 65.8 bits (160), Expect = 7e-13
 Identities = 13/83 (15%), Positives = 36/83 (43%), Gaps = 11/83 (13%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR-------VKVIDFGSASHVSKAV 210
            +++L  + ++    +IH D+KP+N +L +   +          + +ID G +  +    
Sbjct: 178 AMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP 237

Query: 211 CNTYLQSR----YYRAPEIILGE 229
             T   ++     ++  E++  +
Sbjct: 238 KGTIFTAKCETSGFQCVEMLSNK 260

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 6/72 (8%)

Query: 160 QVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQ 216
           Q++ ++  L L  + + H D+KP N+ LV+       +K+ DFGSA  +S +  N  Y+ 
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNV-LVNE--ADGTLKLCDFGSAKKLSPSEPNVAYIC 193

Query: 217 SRYYRAPEIILG 228
           SRYYRAPE+I G
Sbjct: 194 SRYYRAPELIFG 205

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFV 107
           E  DLL  +L     E R+ P EAL H + 
Sbjct: 290 EAYDLLSALLQYLP-EERMKPYEALCHPYF 318

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 65.5 bits (160), Expect = 7e-13
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTYLQSR 218
            V+  +  L++ G++H ++KP NIM V         K+ DFG+A  +       +   + 
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179

Query: 219 YYRAPEIILGE 229
            Y  P++    
Sbjct: 180 EYLHPDMYERA 190

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTYLQSR 218
            V+  +  L++ G++H ++KP NIM V         K+ DFG+A  +       +   + 
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179

Query: 219 YYRAPEIILG 228
            Y  P++   
Sbjct: 180 EYLHPDMYER 189

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTY 214
           N+  Q+L+ +  L +  ++H D+KPENI+L +       +K++DFG +S  SK       
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLNIKIVDFGLSSFFSKDYKLRDR 208

Query: 215 LQSRYYRAPEIILGE 229
           L + YY APE++  +
Sbjct: 209 LGTAYYIAPEVLKKK 223

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L  +  L    + H DLKPENIML+D       +K+IDFG A  +           + 
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182

Query: 219 YYRAPEIILGE 229
            + APEI+  E
Sbjct: 183 EFVAPEIVNYE 193

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L  +  L    + H DLKPENIML+D       +K+IDFG A  +           + 
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182

Query: 219 YYRAPEIILGE 229
            + APEI+  E
Sbjct: 183 EFVAPEIVNYE 193

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 63.5 bits (154), Expect = 7e-12
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
            + +AL  L +  +IH DLKPENI+L  P  Q    K+ID G +       +C  ++ + 
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL 187

Query: 219 YYRAPEIILGE 229
            Y APE++  +
Sbjct: 188 QYLAPELLEQK 198

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 63.3 bits (154), Expect = 7e-12
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
               QV   L  + +   +H DLKPENIM     ++   +K+IDFG  +H+         
Sbjct: 259 EYMRQVCKGLCHMHENNYVHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQSVKVT 316

Query: 215 LQSRYYRAPEIILGE 229
             +  + APE+  G+
Sbjct: 317 TGTAEFAAPEVAEGK 331

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 62.2 bits (152), Expect = 8e-12
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L  +  L    + H DLKPENIML+D      R+K+IDFG A  +           + 
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 175

Query: 219 YYRAPEIILGE 229
            + APEI+  E
Sbjct: 176 EFVAPEIVNYE 186

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 62.5 bits (152), Expect = 8e-12
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------ 209
           N+  Q+ +AL  L   G+ H D+KPEN +      + + +K++DFG +    K       
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTN--KSFEIKLVDFGLSKEFYKLNNGEYY 229

Query: 210 VCNTYLQSRYYRAPEIILGE 229
              T   + Y+ APE++   
Sbjct: 230 GMTTKAGTPYFVAPEVLNTT 249

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L  +  L  L + H DLKPENIML+D      R+K+IDFG A  +           + 
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181

Query: 219 YYRAPEIILGE 229
            + APEI+  E
Sbjct: 182 EFVAPEIVNYE 192

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTY 214
            +  QVL+ +  + +  ++H DLKPEN++L     +   +++IDFG ++H          
Sbjct: 130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEASKKMKDK 188

Query: 215 LQSRYYRAPEIILG 228
           + + YY APE++ G
Sbjct: 189 IGTAYYIAPEVLHG 202

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
            +  QVL+ +  L +  ++H DLKPEN++L     +   +K++DFG ++           
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQKKMKER 198

Query: 215 LQSRYYRAPEIILG 228
           L + YY APE++  
Sbjct: 199 LGTAYYIAPEVLRK 212

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTY 214
            +  QV + +  + +  ++H DLKPENI+L     +   +K+IDFG ++   +       
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTKMKDR 183

Query: 215 LQSRYYRAPEIILG 228
           + + YY APE++ G
Sbjct: 184 IGTAYYIAPEVLRG 197

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 154 PGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHV-----S 207
           P  +  Q  + L  L  L ++H DLKP NI++  P      +  + DFG    +     S
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179

Query: 208 KAVCNTYLQSRYYRAPEIILGE 229
            +  +    +  + APE++  +
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSED 201

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 13/88 (14%)

Query: 142 PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG 201
             P A+ +         L++L AL  L  +GL++ DLKPENIML        ++K+ID G
Sbjct: 178 KLPVAEAI------AYLLEILPALSYLHSIGLVYNDLKPENIML-----TEEQLKLIDLG 226

Query: 202 SASHVSKAVCNTYLQSRYYRAPEIILGE 229
           + S ++         +  ++APEI+   
Sbjct: 227 AVSRINSF--GYLYGTPGFQAPEIVRTG 252

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTY 214
               Q+L A+  L + G+IH DLKPEN++L     +   +K+ DFG +  + + ++  T 
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSLMRTL 301

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APE+++  
Sbjct: 302 CGTPTYLAPEVLVSV 316

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q    L  + +  ++H D+KPENIM     ++   VK+IDFG A+ ++   +      + 
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEIVKVTTATA 214

Query: 219 YYRAPEIILGE 229
            + APEI+  E
Sbjct: 215 EFAAPEIVDRE 225

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 60.4 bits (147), Expect = 5e-11
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTYLQS 217
           Q+L AL       +IH D+KP  ++L         VK+  FG A  + +   V    + +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGESGLVAGGRVGT 196

Query: 218 RYYRAPEIILGE 229
            ++ APE++  E
Sbjct: 197 PHFMAPEVVKRE 208

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+   +  + Q+ ++H DLKPENI+ V+  R   ++K+IDFG A              + 
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVN--RDAKQIKIIDFGLARRYKPREKLKVNFGTP 252

Query: 219 YYRAPEIILGE 229
            + APE++  +
Sbjct: 253 EFLAPEVVNYD 263

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 59.9 bits (146), Expect = 6e-11
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            V  QVL+A+  L + G++H DLKPEN++ + P     ++ + DFG +      + +T  
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-KIMITDFGLSKMEQNGIMSTAC 168

Query: 216 QSRYYRAPEIILGE 229
            +  Y APE++  +
Sbjct: 169 GTPGYVAPEVLAQK 182

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            +   + TA+  L    + H D+KPEN++      +   +K+ DFG A   ++    T  
Sbjct: 132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQNALQTPC 190

Query: 216 QSRYYRAPEIILGE 229
            + YY APE++  E
Sbjct: 191 YTPYYVAPEVLGPE 204

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
           +   QV  AL  L    + H D++PENI+     R+   +K+I+FG A  +         
Sbjct: 106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGDNFRLL 163

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APE+   +
Sbjct: 164 FTAPEYYAPEVHQHD 178

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 59.7 bits (145), Expect = 7e-11
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           QVL A+      G++H D+K ENI L+D  R    +K+IDFGS + +   V   +  +R 
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENI-LIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRV 213

Query: 220 YRAPEIILGE 229
           Y  PE I   
Sbjct: 214 YSPPEWIRYH 223

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 59.2 bits (144), Expect = 9e-11
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
            +  QV + +  + +  ++H DLKPENI+L     +   +K+IDFG ++   +       
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTKMKDR 183

Query: 215 LQSRYYRAPEIILG 228
           + + YY APE++ G
Sbjct: 184 IGTAYYIAPEVLRG 197

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 15/89 (16%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDP---------VRQPYRVKVIDFGSASHV 206
           ++  Q+ + +  L  L +IH DLKP+NI++              +  R+ + DFG    +
Sbjct: 119 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178

Query: 207 S------KAVCNTYLQSRYYRAPEIILGE 229
                  +   N    +  +RAPE++   
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEES 207

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            V   +   +  L   G++H DLKP NI+ VD    P  +++ DFG A  +     N  L
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLL 177

Query: 216 Q----SRYYRAPEIILGE 229
                +  + APE++  +
Sbjct: 178 MTPCYTANFVAPEVLERQ 195

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
            VL+A+    +L + H DLKPEN + +        +K+IDFG A+      +  T + + 
Sbjct: 114 DVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172

Query: 219 YYRAPEIILG 228
           YY +P+++ G
Sbjct: 173 YYVSPQVLEG 182

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L  +  L Q  ++H DLKP+NI+L         +K++DFG +  +  A      + + 
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG-DIKIVDFGMSRKIGHACELREIMGTP 197

Query: 219 YYRAPEIILGE 229
            Y APEI+  +
Sbjct: 198 EYLAPEILNYD 208

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q++ AL       ++H DLKPENI+  D       +K+IDFG A              + 
Sbjct: 132 QMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190

Query: 219 YYRAPEIILGE 229
            Y APE+   +
Sbjct: 191 LYMAPEVFKRD 201

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           QV+ A+      G++H D+K ENI L+D  R     K+IDFGS + +       +  +R 
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENI-LIDLRRG--CAKLIDFGSGALLHDEPYTDFDGTRV 203

Query: 220 YRAPEIILGE 229
           Y  PE I   
Sbjct: 204 YSPPEWISRH 213

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +TLQV+  L  L   GL+H  L+P +I ++D   Q   V +  F         V      
Sbjct: 211 LTLQVIRLLASLHHYGLVHTYLRPVDI-VLD---QRGGVFLTGFEHLVRDGARV--VSSV 264

Query: 217 SRYYRAPEIILGE 229
           SR +  PE+    
Sbjct: 265 SRGFEPPELEARR 277

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
           +   Q+L ++      G++H +LKPEN++L     +   VK+ DFG A  V+ +   + +
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHGF 167

Query: 215 LQSRYYRAPEIILGE 229
             +  Y +PE++  +
Sbjct: 168 AGTPGYLSPEVLKKD 182

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
           +   Q+L A+  L + G++H DLKPEN++   P      +K+ DFG +  V    +  T 
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEHQVLMKTV 210

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APEI+ G 
Sbjct: 211 CGTPGYCAPEILRGC 225

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 58.3 bits (141), Expect = 3e-10
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+ +R
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 228 YYRAPEVILG 237

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 41  SKEARKYIFNCLD----DIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRI 96
               R Y+ N          ++  P  L   +    K    +  DLL +ML +D   +RI
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKL-FPDSLFPADSEHNKLKASQARDLLSKMLVID-PAKRI 348

Query: 97  TPGEALNHAFVTLAH 111
           +  +AL H ++ + +
Sbjct: 349 SVDDALQHPYINVWY 363

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSR 218
           Q+L ++      G++H +LKPEN++L     +   VK+ DFG A  V+ +   + +  + 
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAWHGFAGTP 194

Query: 219 YYRAPEIILGE 229
            Y +PE++  +
Sbjct: 195 GYLSPEVLKKD 205

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
           Q+L  +  L   G+IH DLKP NI+    V+    +K++DFG A     +   T Y+ +R
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190

Query: 219 YYRAPEIILG 228
           YYRAPE+ILG
Sbjct: 191 YYRAPEVILG 200

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 14/79 (17%)

Query: 41  SKEARKYIFNC-------LDDI-GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQV 92
               R Y+ N         + +   V  P D E  +L A +A      DLL +ML +D  
Sbjct: 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA-----RDLLSKMLVID-A 307

Query: 93  ERRITPGEALNHAFVTLAH 111
            +RI+  EAL H ++ + +
Sbjct: 308 SKRISVDEALQHPYINVWY 326

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
               Q+L A+  L + G+IH DLKPEN++L     +   +K+ DFG +  + +  +  T 
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETSLMRTL 176

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APE+++  
Sbjct: 177 CGTPTYLAPEVLVSV 191

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 58.1 bits (140), Expect = 3e-10
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +T Q++     L+  GL+H    P+N+ +        R+ + D  +   V          
Sbjct: 199 LTAQLIRLAANLQSKGLVHGHFTPDNLFI----MPDGRLMLGDVSALWKVG-TRGPASSV 253

Query: 217 SRYYRAPEIILGE 229
              Y   E +   
Sbjct: 254 PVTYAPREFLNAS 266

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHVSKAVCNTYLQSR 218
           ++L AL     +G++H D+KP N+M+    R+   +++ID+G A  +      N  + SR
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRK---LRLIDWGLAEFYHPGQEYNVRVASR 194

Query: 219 YYRAPEIILG 228
           Y++ PE+++ 
Sbjct: 195 YFKGPELLVD 204

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           E +D L ++L  D  + R+T  EA+ H +
Sbjct: 295 EALDFLDKLLRYDH-QSRLTAREAMEHPY 322

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNT 213
           +   Q+L A+L   Q+G++H +LKPEN++L     +   VK+ DFG A  V   +     
Sbjct: 114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQAWFG 172

Query: 214 YLQSRYYRAPEIILGE 229
           +  +  Y +PE++  +
Sbjct: 173 FAGTPGYLSPEVLRKD 188

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 5/76 (6%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G V++ V+  L  L+ +  ++H D+KP NI LV+   +   +K+ DFG +  +  ++ N+
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNI-LVNSRGE---IKLCDFGVSGQLIDSMANS 189

Query: 214 YLQSRYYRAPEIILGE 229
           ++ +R Y +PE + G 
Sbjct: 190 FVGTRSYMSPERLQGT 205

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 10/82 (12%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-----KAV 210
            V   V +AL  L   G+ H DLKPENI+   P  Q   VK+ DF   S +        +
Sbjct: 115 VVVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIKLNGDCSPI 173

Query: 211 CNTYLQSR----YYRAPEIILG 228
               L +      Y APE++  
Sbjct: 174 STPELLTPCGSAEYMAPEVVEA 195

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-----Y 214
           Q+L  L  +    ++H DLKP N+  ++   +   +K+ DFG A  +     +       
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANL-FIN--TEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184

Query: 215 LQSRYYRAPEIILG 228
           L +++YR+P ++L 
Sbjct: 185 LVTKWYRSPRLLLS 198

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 80  IDLLKRMLTMDQVERRITPGEALNHAFVTLAH 111
           +D L+++LT      R+T  EAL+H ++++  
Sbjct: 283 VDFLEQILTFSP-MDRLTAEEALSHPYMSIYS 313

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT 213
           +TLQV+  L  L   GL+H  L+P +I+L     Q   V +  F        +       
Sbjct: 216 LTLQVIRLLASLHHYGLVHTYLRPVDIVL----DQRGGVFLTGFEHLVRDGASAVSPIGR 271

Query: 214 YLQSRYYRAPEIILGE 229
                   A  ++   
Sbjct: 272 GFAPPETTAERMLPFG 287

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 5/69 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G++H DLKP N+     V +   +K++DFG A H    +   Y+ +R+
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLA----VNEDCELKILDFGLARHADAEMTG-YVVTRW 188

Query: 220 YRAPEIILG 228
           YRAPE+IL 
Sbjct: 189 YRAPEVILS 197

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
            +  K A+ YI +            D    +L   +A   +  DLL++ML +D V++R+T
Sbjct: 250 KLNDKAAKSYIQSL-----PQTPRKDFT--QLFP-RASP-QAADLLEKMLELD-VDKRLT 299

Query: 98  PGEALNHAFVTLAH 111
             +AL H F     
Sbjct: 300 AAQALTHPFFEPFR 313

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
                 L AL  L   GL+H D+KP NI  + P     R K+ DFG    +  A      
Sbjct: 161 GYLRDTLLALAHLHSQGLVHLDVKPANI-FLGPRG---RCKLGDFGLLVELGTAGAGEVQ 216

Query: 215 LQSRYYRAPEIILG 228
                Y APE++ G
Sbjct: 217 EGDPRYMAPELLQG 230

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +   G+IH DLKP N+     V +   +K++DFG A      +   Y+ +R+
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLA----VNEDCELKILDFGLARQADSEMTG-YVVTRW 190

Query: 220 YRAPEIILG 228
           YRAPE+IL 
Sbjct: 191 YRAPEVILN 199

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
            ++S EA+ Y+              D     +L   A     ++LL++ML +D  E+R+T
Sbjct: 252 RLQSDEAKNYMKGL-----PELEKKDFA--SILT-NASP-LAVNLLEKMLVLD-AEQRVT 301

Query: 98  PGEALNHAFVTLAH 111
            GEAL H +    H
Sbjct: 302 AGEALAHPYFESLH 315

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
            +   +  A+  L  + + H D+KPEN++     R    +K+ DFG A   +      T 
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNSLTTP 223

Query: 215 LQSRYYRAPEIILGE 229
             + YY APE++  E
Sbjct: 224 CYTPYYVAPEVLGPE 238

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
            +   +L  +  L +L ++H DLKPENI+L D       +K+ DFG +  +         
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDD----DMNIKLTDFGFSCQLDPGEKLREV 183

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APEII   
Sbjct: 184 CGTPSYLAPEIIECS 198

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 5/69 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           Q+L  L  +    +IH DLKP N+     V +   +K++DFG A H +  +   Y+ +R+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLA----VNEDCELKILDFGLARHTADEMTG-YVATRW 194

Query: 220 YRAPEIILG 228
           YRAPEI+L 
Sbjct: 195 YRAPEIMLN 203

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
            I S+ AR YI +            +     +    A+    +DLL++ML +D  ++RIT
Sbjct: 256 KISSESARNYIQSL-----TQMPKMNFA--NVFI-GANP-LAVDLLEKMLVLD-SDKRIT 305

Query: 98  PGEALNHAFVTLAH 111
             +AL HA+    H
Sbjct: 306 AAQALAHAYFAQYH 319

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSR 218
            +L  L  L + G++H DL P NI+    +     + + DF  A   +     T Y+  R
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNIL----LADNNDITICDFNLAREDTADANKTHYVTHR 197

Query: 219 YYRAPEIILG 228
           +YRAPE+++ 
Sbjct: 198 WYRAPELVMQ 207

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 9/74 (12%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
              S  AR Y+ N L ++        +   + +A        +DL+ +ML  +  +RRI+
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA--------LDLIAKMLEFN-PQRRIS 310

Query: 98  PGEALNHAFVTLAH 111
             +AL H +     
Sbjct: 311 TEQALRHPYFESLF 324

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNT 213
            +  ++++A+  +  +G++H DLKPEN++  D       +K+IDFG A           T
Sbjct: 110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL-EIKIIDFGFARLKPPDNQPLKT 168

Query: 214 YLQSRYYRAPEIILGE 229
              + +Y APE++   
Sbjct: 169 PCFTLHYAAPELLNQN 184

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
               Q L  L  L    ++H D+K +N+ L+       R  + DFG A  +        L
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNV-LLSS--DGSRAALCDFGHALCLQPDGLGKSL 210

Query: 216 QSR-------YYRAPEIILGE 229
            +         + APE+++G+
Sbjct: 211 LTGDYIPGTETHMAPEVVMGK 231

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 9/74 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-----Y 214
           Q+L  L  +    ++H DLKP N++    +     +K+ DFG A        +T     Y
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLL----LNTTCDLKICDFGLARVADPDHDHTGFLTEY 191

Query: 215 LQSRYYRAPEIILG 228
           + +R+YRAPEI+L 
Sbjct: 192 VATRWYRAPEIMLN 205

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
            I + +AR Y+ +                  L    AD  + +DLL +MLT +   +RI 
Sbjct: 258 CIINLKARNYLLSL-----PHKNKVPWN--RLFP-NADS-KALDLLDKMLTFN-PHKRIE 307

Query: 98  PGEALNHAFV 107
             +AL H ++
Sbjct: 308 VEQALAHPYL 317

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 53.9 bits (130), Expect = 7e-09
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 15/78 (19%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
            +   L  +   G  H DLKP NI+L D      +  ++D GS +     V  +      
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGD----EGQPVLMDLGSMNQACIHVEGSRQALTL 197

Query: 219 ----------YYRAPEII 226
                      YRAPE+ 
Sbjct: 198 QDWAAQRCTISYRAPELF 215

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.0 bits (130), Expect = 7e-09
 Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTYLQSR 218
           Q+++A+  L+   +IH D+K ENI ++    + + +K+IDFGSA+++ +  +  T+  + 
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENI-VIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTI 193

Query: 219 YYRAPEIILGE 229
            Y APE+++G 
Sbjct: 194 EYCAPEVLMGN 204

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
           ++   +L A+  L    ++H DLKPENI+L D +    ++++ DFG + H+         
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM----QIRLSDFGFSCHLEPGEKLREL 259

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APEI+   
Sbjct: 260 CGTPGYLAPEILKCS 274

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 135 QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 194
           +Y  +  P      +      N T Q+L  +     + ++H D+KP+NI++         
Sbjct: 100 EYIESHGPLSVDTAI------NFTNQILDGIKHAHDMRIVHRDIKPQNILIDS----NKT 149

Query: 195 VKVIDFGSASHVSKAVC---NTYLQSRYYRAPEIILGE 229
           +K+ DFG A  +S+      N  L +  Y +PE   GE
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCN 212
           G + + ++ AL  L  +L +IH D+KP N+ L++ + Q   VK+ DFG S   V     +
Sbjct: 112 GKIAVSIVKALEHLHSKLSVIHRDVKPSNV-LINALGQ---VKMCDFGISGYLVDDVAKD 167

Query: 213 TYLQSRYYRAPEIILGE 229
                + Y APE I  E
Sbjct: 168 IDAGCKPYMAPERINPE 184

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 20/85 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
           Q+L AL  +   G+IH DLKP NI + +       VK+ DFG A +V +++    L S+ 
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDE----SRNVKIGDFGLAKNVHRSLDILKLDSQN 179

Query: 219 ---------------YYRAPEIILG 228
                           Y A E++ G
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDG 204

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 173 LIHADLKPENIMLVDPVRQ-PYRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPEIILG 228
           ++H DL+  NI L       P   KV DFG +    H    +   +     + APE I  
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNF----QWMAPETIGA 200

Query: 229 E 229
           E
Sbjct: 201 E 201

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q+++A+    Q  ++H DLK EN++L D       +K+ DFG S         + +  + 
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLL-D---ADMNIKIADFGFSNEFTVGGKLDAFCGAP 177

Query: 219 YYRAPEIILGE 229
            Y APE+  G+
Sbjct: 178 PYAAPELFQGK 188

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 17/89 (19%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIML---------------VDPVRQPYRVKVIDF 200
           ++ LQV   L  +  + L+H D+KP NI +                D        K+ D 
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 178

Query: 201 GSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           G  + +S            + A E++   
Sbjct: 179 GHVTRISSP--QVEEGDSRFLANEVLQEN 205

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 13/92 (14%)

Query: 141 APPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 200
            P  P + +       +  Q+ +AL      G  H D+KPENI++           ++DF
Sbjct: 129 GPLAPPRAV------AIVRQIGSALDAAHAAGATHRDVKPENILVSA----DDFAYLVDF 178

Query: 201 GSASHVSKAVC---NTYLQSRYYRAPEIILGE 229
           G AS  +          + + YY APE     
Sbjct: 179 GIASATTDEKLTQLGNTVGTLYYMAPERFSES 210

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNT 213
             T Q+L  L  L    ++H D+K +N+ L++       +K+ DFG++  ++       T
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNV-LINTYSG--VLKISDFGTSKRLAGINPCTET 182

Query: 214 YLQSRYYRAPEIILGE 229
           +  +  Y APEII   
Sbjct: 183 FTGTLQYMAPEIIDKG 198

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 16/81 (19%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT------ 213
           Q L A+  L    +IH DLKP N++    +     +KV DFG A  + ++  +       
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLL----INSNCDLKVCDFGLARIIDESAADNSEPTGQ 175

Query: 214 ------YLQSRYYRAPEIILG 228
                 ++ +R+YRAPE++L 
Sbjct: 176 QSGMVEFVATRWYRAPEVMLT 196

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 15/81 (18%)

Query: 32  IGLPET-----SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRM 86
           IG P +      I+S  AR+YI +       +     LE  ++   + +  + IDLL+RM
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSL-----PMYPAAPLE--KMFP-RVNP-KGIDLLQRM 289

Query: 87  LTMDQVERRITPGEALNHAFV 107
           L  D   +RIT  EAL H ++
Sbjct: 290 LVFD-PAKRITAKEALEHPYL 309

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 15/100 (15%)

Query: 135 QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR 194
                  P  P + +       V      AL    Q G+IH D+KP NIM    +     
Sbjct: 105 DIVHTEGPMTPKRAI------EVIADACQALNFSHQNGIIHRDVKPANIM----ISATNA 154

Query: 195 VKVIDFGSASHVSKAVC-----NTYLQSRYYRAPEIILGE 229
           VKV+DFG A  ++ +          + +  Y +PE   G+
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 15/75 (20%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 214
           Q++     L  L LI+ DLKPEN+++ D  +Q Y ++V DFG A  V      +C T   
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI-D--QQGY-IQVTDFGFAKRVKGRTWTLCGTPEA 204

Query: 215 LQSRYYRAPEIILGE 229
           L      APEIIL +
Sbjct: 205 L------APEIILSK 213

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 50.5 bits (121), Expect = 9e-08
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR 218
            VL +   +  +  + H D+KP NI L+D   +  RVK+ DFG + ++          + 
Sbjct: 159 SVLNSFSYIHNEKNICHRDVKPSNI-LMD---KNGRVKLSDFGESEYMVDKKIKGSRGTY 214

Query: 219 YYRAPEIILGE 229
            +  PE    E
Sbjct: 215 EFMPPEFFSNE 225

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 20/83 (24%)

Query: 160 QVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQS 217
           Q   A+  +  ++  +IH DLK EN++L +       +K+ DFGSA+ +S     ++   
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSN----QGTIKLCDFGSATTISHYPDYSWSAQ 199

Query: 218 R--------------YYRAPEII 226
           R               YR PEII
Sbjct: 200 RRALVEEEITRNTTPMYRTPEII 222

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNT 213
              +Q+ +AL  +    ++H D+KP N+ +         VK+ D G     S      ++
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDLGLGRFFSSKTTAAHS 195

Query: 214 YLQSRYYRAPEIILGE 229
            + + YY +PE I   
Sbjct: 196 LVGTPYYMSPERIHEN 211

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q+L+ +     + + H DLK EN  L+D    P R+K+ DFG S S V  +   + + + 
Sbjct: 124 QLLSGVSYCHSMQICHRDLKLENT-LLDGSPAP-RLKICDFGYSKSSVLHSQPKSTVGTP 181

Query: 219 YYRAPEIILG 228
            Y APE++L 
Sbjct: 182 AYIAPEVLLR 191

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCN 212
           G +T+ ++ AL  LK + G+IH D+KP NI L+D   Q   +K+ DFG S   V     +
Sbjct: 127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNI-LLDERGQ---IKLCDFGISGRLVDDKAKD 182

Query: 213 TYLQSRYYRAPEII 226
                  Y APE I
Sbjct: 183 RSAGCAAYMAPERI 196

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 19/79 (24%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-------SKAVCN 212
           +V+ AL  +  +G IH D+KP+N++L D  +  + +K+ DFG+   +             
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLL-D--KSGH-LKLADFGTCMKMNKEGMVRCDTAVG 231

Query: 213 T--YLQSRYYRAPEIILGE 229
           T  Y+      +PE++  +
Sbjct: 232 TPDYI------SPEVLKSQ 244

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
           Q+   +  +    LI+ DLKP NI LVD      +VK+ DFG    +  ++ N   ++R 
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVD----TKQVKIGDFG----LVTSLKNDGKRTRS 181

Query: 219 ----YYRAPEIILGE 229
                Y +PE I  +
Sbjct: 182 KGTLRYMSPEQISSQ 196

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 16/78 (20%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           ++++AL  L   G+IH DLKPENI+L +     + +++ DFG+A    K +     Q+R 
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL-N--EDMH-IQITDFGTA----KVLSPESKQARA 189

Query: 220 --------YRAPEIILGE 229
                   Y +PE++  +
Sbjct: 190 NSFVGTAQYVSPELLTEK 207

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIML 185
            +++  R S+        P   V       ++  Q+L  +  L    ++H DLKP NI++
Sbjct: 108 HIIKFHRASKANKKPVQLPRGMV------KSLLYQILDGIHYLHANWVLHRDLKPANILV 161

Query: 186 VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY------YRAPEIILGE 229
           +    +  RVK+ D G A   +  +               YRAPE++LG 
Sbjct: 162 MGEGPERGRVKIADMGFARLFNSPL-KPLADLDPVVVTFWYRAPELLLGA 210

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 11/81 (13%)

Query: 156 NVTLQVLTAL-----LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--K 208
            V  Q+  AL            ++H DLKP N+ L         VK+ DFG A  ++   
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARILNHDT 170

Query: 209 AVCNTYLQSRYYRAPEIILGE 229
           +   T++ + YY +PE +   
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRM 191

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           ++  AL    +  +IH D+KPEN+++         +K+ DFG + H       T   +  
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMG----YKGELKIADFGWSVHAPSLRRRTMCGTLD 177

Query: 220 YRAPEIILG 228
           Y  PE+I G
Sbjct: 178 YLPPEMIEG 186

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           ++  AL       +IH D+KPEN++L     +   +K+ DFG + H   +       +  
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLL-GSAGE---LKIADFGWSVHAPSSRRTDLCGTLD 172

Query: 220 YRAPEIILG 228
           Y  PE+I G
Sbjct: 173 YLPPEMIEG 181

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNT 213
           +  +Q+  AL  +    ++H D+K +NI L     +   V++ DFG A  ++    +   
Sbjct: 129 DWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTVQLGDFGIARVLNSTVELARA 184

Query: 214 YLQSRYYRAPEIILGE 229
            + + YY +PEI   +
Sbjct: 185 CIGTPYYLSPEICENK 200

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.9 bits (115), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 15/75 (20%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNT--Y 214
           +V  AL  L    +I+ DLKPENI+L D  +  + +K+ DFG A +V      +C T  Y
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILL-D--KNGH-IKITDFGFAKYVPDVTYTLCGTPDY 169

Query: 215 LQSRYYRAPEIILGE 229
           +      APE++  +
Sbjct: 170 I------APEVVSTK 178

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 28/93 (30%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT------ 213
            +L     + + G+IH DLKP N  L++   Q   VKV DFG A  ++            
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANC-LLN---QDCSVKVCDFGLARTINSEKDTNIVNDLE 192

Query: 214 ------------------YLQSRYYRAPEIILG 228
                             ++ +R+YRAPE+IL 
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
           +I   E  KYI            P +L+  +         + I+LL+ ML  +   +RIT
Sbjct: 306 NINKPEVIKYIKLF-----PHRKPINLK--QKYP-SISD-DGINLLESMLKFN-PNKRIT 355

Query: 98  PGEALNHAFVTLAH 111
             +AL+H ++    
Sbjct: 356 IDQALDHPYLKDVR 369

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           +++  L  +    +++ DLKP NI+L D     + V++ D G A   SK   +  + +  
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILL-D--EHGH-VRISDLGLACDFSKKKPHASVGTHG 355

Query: 220 YRAPEIILGE 229
           Y APE++   
Sbjct: 356 YMAPEVLQKG 365

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 48.0 bits (114), Expect = 9e-07
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 47/118 (39%)

Query: 157 VTLQVLTALLKL-KQLGLIHADLKPENIMLVDP--------------------------- 188
           +  QVL  L  L  +  +IH D+KPENI+L                              
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210

Query: 189 ------------------VRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG 228
                               +  +VK+ D G+A  V K      +Q+R YR+ E+++G
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-TEDIQTRQYRSLEVLIG 267

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 34  LPETSIKSKEARKYIFN---CLDDIGQVNVPTDLEGGELLAEK-----ADRREFIDLLKR 85
           +P   I + +  K  F     L  I ++  P  L   E+L EK      +   F D L  
Sbjct: 318 VPRKLIVAGKYSKEFFTKKGDLKHITKLK-PWGLF--EVLVEKYEWSQEEAAGFTDFLLP 374

Query: 86  MLTMDQVERRITPGEALNHAF 106
           ML +   E+R T  E L H +
Sbjct: 375 MLELIP-EKRATAAECLRHPW 394

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q++ A+    +  ++H DLKPEN+ L+D       VK+ DFG S          T   S 
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENL-LLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSP 171

Query: 219 YYRAPEIILGE 229
            Y APE+I G+
Sbjct: 172 NYAAPEVINGK 182

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 19/79 (24%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-------SKAVCN 212
           +++ A+  + +LG +H D+KP+NI+L D  R  + +++ DFGS   +       S     
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILL-D--RCGH-IRLADFGSCLKLRADGTVRSLVAVG 225

Query: 213 T--YLQSRYYRAPEIILGE 229
           T  YL      +PEI+   
Sbjct: 226 TPDYL------SPEILQAV 238

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 19/79 (24%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA-------SHVSKAVCN 212
           +++ A+  + QL  +H D+KP+NI++ D     + +++ DFGS        +  S     
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILM-D--MNGH-IRLADFGSCLKLMEDGTVQSSVAVG 238

Query: 213 T--YLQSRYYRAPEIILGE 229
           T  Y+      +PEI+   
Sbjct: 239 TPDYI------SPEILQAM 251

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           VT   L  L  L    +IH D+K  NI+L +P      VK+ DFGSAS ++ A  N+++ 
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG----LVKLGDFGSASIMAPA--NSFVG 212

Query: 217 SRYYRAPEIILGE 229
           + Y+ APE+IL  
Sbjct: 213 TPYWMAPEVILAM 225

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q+L+A+    +  ++H DLKPEN+ L+D        K+ DFG S          T   S 
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENV-LLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSP 174

Query: 219 YYRAPEIILGE 229
            Y APE+I G 
Sbjct: 175 NYAAPEVISGR 185

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 17/75 (22%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-----VCNT- 213
           +++ AL  L+   +IH D+KP+NI+L D     + V + DF  A+ + +      +  T 
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILL-D--EHGH-VHITDFNIAAMLPRETQITTMAGTK 178

Query: 214 -YLQSRYYRAPEIIL 227
            Y+      APE+  
Sbjct: 179 PYM------APEMFS 187

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 168 LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA---SHVSKAVCNTYLQSRYYRAPE 224
           ++   LIH DLKP N++LV        +K+ DFG+A            +      + APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVA---GGTVLKICDFGTACDIQTHMTNNKGSAA----WMAPE 173

Query: 225 IILGE 229
           +  G 
Sbjct: 174 VFEGS 178

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ--- 216
           Q++  L  L   G++H D+KP N+ L+        +K+   G A  +     +   +   
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNL-LLT---TGGTLKISALGVAEALHPFAADDTCRTSQ 172

Query: 217 -SRYYRAPEIILGE 229
            S  ++ PEI  G 
Sbjct: 173 GSPAFQPPEIANGL 186

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSR 218
           Q+L+ +    +  ++H DLKPEN+ L+D        K+ DFG S          T   S 
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENV-LLD---AHMNAKIADFGLSNMMSDGEFLRTSCGSP 179

Query: 219 YYRAPEIILGE 229
            Y APE+I G 
Sbjct: 180 NYAAPEVISGR 190

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 18/84 (21%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--------------SH 205
           Q+  A+  L   GL+H DLKP NI           VKV DFG                  
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTM----DDVVKVGDFGLVTAMDQDEEEQTVLTPM 227

Query: 206 VSKAVCNTYLQSRYYRAPEIILGE 229
            + A     + ++ Y +PE I G 
Sbjct: 228 PAYATHTGQVGTKLYMSPEQIHGN 251

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 6/75 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           +  ++L  L  L Q  +IH D+K +N++L +       VK++DFG ++ + + V   NT+
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----EVKLVDFGVSAQLDRTVGRRNTF 189

Query: 215 LQSRYYRAPEIILGE 229
           + + Y+ APE+I  +
Sbjct: 190 IGTPYWMAPEVIACD 204

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 14/62 (22%)

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSA------SHVSKAVCNTYLQSRYYRAPEIIL 227
           +H +LK  N+ LVD   + Y VKV DFG +         SK+   T      + APE++ 
Sbjct: 161 VHRNLKSPNL-LVD---KKYTVKVCDFGLSRLKASTFLSSKSAAGTPE----WMAPEVLR 212

Query: 228 GE 229
            E
Sbjct: 213 DE 214

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 9/58 (15%)

Query: 173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSA-SHVSKAVCNTYLQSRYYRAPEIILGE 229
           +    L   ++M+ +        ++       S  S            + APE +  +
Sbjct: 134 IPRHALNSRSVMIDE----DMTARISMADVKFSFQSPGRMYAPA----WVAPEALQKK 183

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 206
            +   +  A+  L  + + H D+KPEN++     R    +K+ DFG A   
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET 170

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 14/81 (17%)

Query: 155 GNVTLQVLTALLKLK-QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           G +TL  + AL  LK  L +IH D+KP NI L+D       +K+ DFG    +S  + ++
Sbjct: 128 GKITLATVKALNHLKENLKIIHRDIKPSNI-LLDRSGN---IKLCDFG----ISGQLVDS 179

Query: 214 YLQS-----RYYRAPEIILGE 229
             ++     R Y APE I   
Sbjct: 180 IAKTRDAGCRPYMAPERIDPS 200

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 18/84 (21%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR- 218
           Q+  A+  L   GL+H DLKP NI           VKV DFG  + + +      + +  
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTM----DDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 219 -------------YYRAPEIILGE 229
                         Y +PE I G 
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGN 205

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSK-AVCNTYLQS 217
            ++  +  L    +IH D+KP N+ LV    +   +K+ DFG S       A+ +  + +
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNL-LVG---EDGHIKIADFGVSNEFKGSDALLSNTVGT 200

Query: 218 RYYRAPEIILGE 229
             + APE +   
Sbjct: 201 PAFMAPESLSET 212

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 45.2 bits (108), Expect = 5e-06
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 18/77 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS------KAVCNT 213
           Q++T +L L   G++H DL   N++L         +K+ DFG A+ +         +C T
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTR----NMNIKIADFGLATQLKMPHEKHYTLCGT 175

Query: 214 --YLQSRYYRAPEIILG 228
             Y+      +PEI   
Sbjct: 176 PNYI------SPEIATR 186

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.6 bits (108), Expect = 6e-06
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSASHVSK-AVCNTYLQ 216
           ++   L  L +  +++ DLKPENI+L           +++ D G A HV +       + 
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL------DDHGHIRISDLGLAVHVPEGQTIKGRVG 347

Query: 217 SRYYRAPEIILGE 229
           +  Y APE++  E
Sbjct: 348 TVGYMAPEVVKNE 360

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++++AL  L    +++ D+K EN+ML D       +K+ DFG      S     K  C T
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLML-DKDGH---IKITDFGLCKEGISDGATMKTFCGT 168

Query: 214 --YLQSRYYRAPEIILGE 229
             YL      APE++   
Sbjct: 169 PEYL------APEVLEDN 180

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           Q+++ L  L Q  +I+ DLKPEN++L D       V++ D G      +    +K    T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL-D--DDGN-VRISDLGLAVELKAGQTKTKGYAGT 352

Query: 214 --YLQSRYYRAPEIILGE 229
             ++      APE++LGE
Sbjct: 353 PGFM------APELLLGE 364

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 6/75 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V  Q+L AL  L    +IH DLK  N+++         +++ DFG ++   K +   +++
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG----DIRLADFGVSAKNLKTLQKRDSF 177

Query: 215 LQSRYYRAPEIILGE 229
           + + Y+ APE+++ E
Sbjct: 178 IGTPYWMAPEVVMCE 192

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 38  SIKSKEARKYIFNC-------LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMD 90
           SI+S  A+  I +          +   +         ++  +     E +DLL ++L  +
Sbjct: 257 SIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316

Query: 91  QVERRITPGEALNHAFVTLAH 111
              +RI+  +AL H FV++ H
Sbjct: 317 -PNKRISANDALKHPFVSIFH 336

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 27/92 (29%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT------ 213
           Q++  +  L   GL+H D+KP NI L++       VKV DFG +         T      
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNI-LLN---AECHVKVADFGLSRSFVNIRRVTNNIPLS 172

Query: 214 -----------------YLQSRYYRAPEIILG 228
                            Y+ +R+YRAPEI+LG
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLG 204

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           +    L  L  L  +  IH D+K  NI+L          K+ DFG A  ++  +   NT 
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG----HAKLADFGVAGQLTDTMAKRNTV 185

Query: 215 LQSRYYRAPEII 226
           + + ++ APE+I
Sbjct: 186 IGTPFWMAPEVI 197

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--SHVSKAVCNT 213
           ++T Q L A+    +   IH D+KPENI L+        +K+ DFG A          + 
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENI-LITKHSV---IKLCDFGFARLLTGPSDYYDD 161

Query: 214 YLQSRYYRAPEIILG 228
            + +R+YR+PE+++G
Sbjct: 162 EVATRWYRSPELLVG 176

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++++AL+ L   G+I+ DLK +N++L D        K+ DFG           +   C T
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLL-DHEGH---CKLADFGMCKEGICNGVTTATFCGT 187

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEI+   
Sbjct: 188 PDYI------APEILQEM 199

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 156 NVTLQVLTALLKL--KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           +   Q+L  L  L  +   +IH DLK +NI  +        VK+ D G A+    +    
Sbjct: 133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNI-FITGPTG--SVKIGDLGLATLKRASFAKA 189

Query: 214 YLQSRYYRAPEII 226
            + +  + APE+ 
Sbjct: 190 VIGTPEFMAPEMY 202

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 151 PAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSASH 205
                 +     Q++  +        +H DLKP+N+ L+          +K+ DFG A  
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL-LLSVSDASETPVLKIGDFGLARA 186

Query: 206 VSKAVCNTYLQ---SRYYRAPEIILGE 229
               +   +     + +YR PEI+LG 
Sbjct: 187 FGIPI-RQFTHEIITLWYRPPEILLGS 212

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 16/70 (22%)

Query: 168 LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA--------SHVSKAVCNTYLQSRY 219
           L    +IH DLK  NI  +    +   VK+ DFG A        SH  + +  + L    
Sbjct: 136 LHAKSIIHRDLKSNNI-FLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL---- 187

Query: 220 YRAPEIILGE 229
           + APE+I  +
Sbjct: 188 WMAPEVIRMQ 197

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++  AL  L + G+I+ DLK +N++L D       +K+ D+G           +   C T
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLL-DSEGH---IKLTDYGMCKEGLRPGDTTSTFCGT 173

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEI+ GE
Sbjct: 174 PNYI------APEILRGE 185

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ--- 216
           Q++  ++ L  +G+ H D+KPEN+ L+D   +   +K+ DFG A+          L    
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERLLNKMC 168

Query: 217 -SRYYRAPEIILG 228
            +  Y APE++  
Sbjct: 169 GTLPYVAPELLKR 181

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTY- 214
               Q++  +       +IH D+KPENI LV        VK+ DFG A  ++      Y 
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENI-LVSQSGV---VKLCDFGFARTLAAPG-EVYD 182

Query: 215 --LQSRYYRAPEIILGE 229
             + +R+YRAPE+++G+
Sbjct: 183 DEVATRWYRAPELLVGD 199

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 33/98 (33%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT------ 213
            +L  +  +   G++H DLKP N  LV+   Q   VKV DFG A  V             
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANC-LVN---QDCSVKVCDFGLARTVDYPENGNSQLPIS 219

Query: 214 -----------------------YLQSRYYRAPEIILG 228
                                  ++ +R+YRAPE+IL 
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL 257

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 10/77 (12%)

Query: 38  SIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT 97
           +++ ++A++YI             TDL   E     +   + I LLKRML  +   +RIT
Sbjct: 341 ALEKEDAKRYIRIF-----PKREGTDLA--ERFP-ASSA-DAIHLLKRMLVFN-PNKRIT 390

Query: 98  PGEALNHAFVTLAHLVD 114
             E L H F     + +
Sbjct: 391 INECLAHPFFKEVRIAE 407

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 170 QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ----SRYYRAPEI 225
            +G+ H D+KPEN+ L+D   +   +K+ DFG A+          L     +  Y APE+
Sbjct: 123 GIGITHRDIKPENL-LLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178

Query: 226 ILGE 229
           +   
Sbjct: 179 LKRR 182

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++ +AL  L  L +++ DLKPENI+L D   Q + + + DFG        +  +   C T
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILL-D--SQGH-IVLTDFGLCKENIEHNSTTSTFCGT 202

Query: 214 --YLQSRYYRAPEIILGE 229
             YL      APE++  +
Sbjct: 203 PEYL------APEVLHKQ 214

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++  AL  L + G+I+ DLK +N++L D   + + +K+ D+G           +   C T
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLL-DS--EGH-IKLTDYGMCKEGLRPGDTTSTFCGT 216

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEI+ GE
Sbjct: 217 PNYI------APEILRGE 228

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 19/79 (24%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG-------SASHVSKAVCN 212
           +++ AL  L +LG+I+ D+K ENI+L D     + V + DFG         +  +   C 
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILL-D--SNGH-VVLTDFGLSKEFVADETERAYDFCG 222

Query: 213 T--YLQSRYYRAPEIILGE 229
           T  Y+      AP+I+ G 
Sbjct: 223 TIEYM------APDIVRGG 235

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++  AL  L Q G+I+ DLKPENIML +   Q + VK+ DFG          V+   C T
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIML-N--HQGH-VKLTDFGLCKESIHDGTVTHTFCGT 184

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEI++  
Sbjct: 185 IEYM------APEILMRS 196

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++  AL  L  LG+I+ DLKPENI+L D   + + +K+ DFG           + + C T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILL-D--EEGH-IKLTDFGLSKESIDHEKKAYSFCGT 189

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APE++   
Sbjct: 190 VEYM------APEVVNRR 201

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V  + L AL  L    +IH D+K +NI+L         VK+ DFG  + ++      +T 
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----SVKLTDFGFCAQITPEQSKRSTM 176

Query: 215 LQSRYYRAPEII 226
           + + Y+ APE++
Sbjct: 177 VGTPYWMAPEVV 188

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 18/77 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS------KAVCNT 213
           Q++     L +  +IH DLK  N+ L +       VK+ DFG A+ V       K +C T
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVEYDGERKKVLCGT 178

Query: 214 --YLQSRYYRAPEIILG 228
             Y+      APE++  
Sbjct: 179 PNYI------APEVLSK 189

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 18/77 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS------KAVCNT 213
           Q++     L +  +IH DLK  N+ L +       VK+ DFG A+ V       K +C T
Sbjct: 149 QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVEYDGERKKVLCGT 204

Query: 214 --YLQSRYYRAPEIILG 228
             Y+      APE++  
Sbjct: 205 PNYI------APEVLSK 215

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 12/65 (18%)

Query: 173 LIHADLKPENIMLVDPVRQPYR----VKVIDFGSA----SHVSKAVCNTYLQSRYYRAPE 224
           +IH DLK  NI+++  V         +K+ DFG A         +    Y     + APE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA----WMAPE 184

Query: 225 IILGE 229
           +I   
Sbjct: 185 VIRAS 189

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++   L  L+  G+I+ DLK +N+ML D       +K+ DFG           +K  C T
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 184

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEII  +
Sbjct: 185 PDYI------APEIIAYQ 196

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           +  ++L  L  L     IH D+K  N++L +       VK+ DFG A  ++      NT+
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG----EVKLADFGVAGQLTDTQIKRNTF 179

Query: 215 LQSRYYRAPEII 226
           + + ++ APE+I
Sbjct: 180 VGTPFWMAPEVI 191

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           ++   L  L+  G+I+ DLK +N+ML D       +K+ DFG           +K  C T
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVML-DSEGH---IKIADFGMCKENIWDGVTTKTFCGT 505

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEII  +
Sbjct: 506 PDYI------APEIIAYQ 517

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 18/78 (23%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
           +++  L  L   G+++ DLK +NI+L D  +  + +K+ DFG           +   C T
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILL-D--KDGH-IKIADFGMCKENMLGDAKTNTFCGT 181

Query: 214 --YLQSRYYRAPEIILGE 229
             Y+      APEI+LG+
Sbjct: 182 PDYI------APEILLGQ 193

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 205
           +++L  L  + +   +H D+K  N++L    + P +V + D+G +  
Sbjct: 158 IRMLDVLEYIHENEYVHGDIKAANLLL--GYKNPDQVYLADYGLSYR 202

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 6/72 (8%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC--NTY 214
           V   VL AL  L   G+IH D+K ++I+L        RVK+ DFG  + +SK V    + 
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDVPKRKSL 201

Query: 215 LQSRYYRAPEII 226
           + + Y+ APE+I
Sbjct: 202 VGTPYWMAPEVI 213

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 150 VPAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 206
                       LQ+L  +       ++H DLKP+N+ L++   +   +K+ DFG A   
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL-LINREGE---LKIADFGLARAF 150

Query: 207 SKAVCNTYLQ---SRYYRAPEIILGE 229
              V   Y     + +YRAP++++G 
Sbjct: 151 GIPV-RKYTHEIVTLWYRAPDVLMGS 175

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 150 VPAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 206
                  +     Q+L  +    Q  ++H DLKP+N+ L++       +K+ DFG A   
Sbjct: 114 TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL-LINSDGA---LKLADFGLARAF 169

Query: 207 SKAVCNTYLQ---SRYYRAPEIILGE 229
              V  +Y     + +YRAP++++G 
Sbjct: 170 GIPV-RSYTHEVVTLWYRAPDVLMGS 194

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 11/86 (12%)

Query: 150 VPAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 206
               P  V     Q+L  L       ++H DLKP+N+ L++   +   +K+ +FG A   
Sbjct: 96  GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL-LINRNGE---LKLANFGLARAF 151

Query: 207 SKAVCNTYLQ---SRYYRAPEIILGE 229
              V   Y     + +YR P+++ G 
Sbjct: 152 GIPV-RCYSAEVVTLWYRPPDVLFGA 176

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%)

Query: 150 VPAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV 206
                 NV     Q+L  L    +  ++H DLKP+N+ L++   +   +K+ DFG A   
Sbjct: 95  NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL-LINERGE---LKLADFGLARAK 150

Query: 207 SKAVCNTYLQ---SRYYRAPEIILGE 229
           S     TY     + +YR P+I+LG 
Sbjct: 151 SIPT-KTYDNEVVTLWYRPPDILLGS 175

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA---SHVSKAVCNTYL 215
             +L  L  + +  ++H D+K  N+ L+        +K+ DFG A   S    +  N Y 
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANV-LITRDGV---LKLADFGLARAFSLAKNSQPNRYT 186

Query: 216 Q---SRYYRAPEIILGE 229
               + +YR PE++LGE
Sbjct: 187 NRVVTLWYRPPELLLGE 203

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 33/234 (14%), Positives = 62/234 (26%), Gaps = 64/234 (27%)

Query: 10  EIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYI------FNCLDDIGQVNVPTD 63
           + VE   R  + +             E    S   R YI      +N      + NV   
Sbjct: 81  KFVEEVLRINYKFLMSPIK------TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS-- 132

Query: 64  LEGGELLAEKADRREFIDLLKRMLTMDQVERRIT----PG--------EALNHAFVTLA- 110
                       R +    L++ L   +  + +      G        +      V    
Sbjct: 133 ------------RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 111 ----HLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALL 166
                 ++  +CN+ +  ++M++     Q              +     ++    L  LL
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQ-KLLYQIDPNWTSRSDHSSNIKLRIHSIQ-AELRRLL 238

Query: 167 KLKQLGLIHADLKPENIMLV-DPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRY 219
           K K           EN +LV   V+        +           C   L +R+
Sbjct: 239 KSKPY---------ENCLLVLLNVQNAKAWNAFNLS---------CKILLTTRF 274

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 3e-04
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 56/232 (24%)

Query: 10  EIVEGTSRFCHNWCYPRR-ALTKIGLPETSI---KSKEARKY-----IFNCLDDIGQVNV 60
            I +G + +  NW +     LT I   E+S+   +  E RK      +F         ++
Sbjct: 336 SIRDGLATW-DNWKHVNCDKLTTI--IESSLNVLEPAEYRKMFDRLSVFP--PS---AHI 387

Query: 61  PTDLEGGELL---AEKADRREFIDLL--KRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           PT L    L+     K+D    ++ L    ++     E  I+    +  +     +L   
Sbjct: 388 PTILL--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS----I-PSI----YLELK 436

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
               N  A    +  +    Y            L+P                   +G  H
Sbjct: 437 VKLENEYA----LHRSIVDHYNIPKTFDSDD--LIPPYLDQYFYS---------HIGH-H 480

Query: 176 ADLKPENIMLVDPVRQPY------RVKVIDFGSASHVSKAVCNTYLQSRYYR 221
                E+   +   R  +        K+    +A + S ++ NT  Q ++Y+
Sbjct: 481 LK-NIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 6e-04
 Identities = 34/224 (15%), Positives = 64/224 (28%), Gaps = 85/224 (37%)

Query: 51  CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVE------------RRI-- 96
              DI  V             +  D ++  D+ K +L+ ++++             R+  
Sbjct: 17  QYKDILSVFEDA-------FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 97  ---TPGEALNHAFVTLAHLVDY--------AHCNNVKASVQMMEVTRRSQYTGATAPPPP 145
              +  E +   FV     ++Y                  +M    R   Y         
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND------- 122

Query: 146 AQVLVPAPPGNVT-----LQVLTALLKLKQLG--LIHADLKPENIM-------LVDPVRQ 191
            QV       NV+     L++  ALL+L+     LI         +       +   V  
Sbjct: 123 NQVF---AKYNVSRLQPYLKLRQALLELRPAKNVLIDG-------VLGSGKTWVALDVCL 172

Query: 192 PYRVKV--------IDFGSASHVSKAVCNT------YLQSRYYR 221
            Y+V+         ++  +        CN+       LQ   Y+
Sbjct: 173 SYKVQCKMDFKIFWLNLKN--------CNSPETVLEMLQKLLYQ 208

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 153 PPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA 209
           P   +     Q L  L  L    ++H DLKPENI LV        VK+ DFG A   S  
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI-LVTSGGT---VKLADFGLARIYSYQ 173

Query: 210 VCNTYLQ---SRYYRAPEIILGE 229
           +         + +YRAPE++L  
Sbjct: 174 M--ALTPVVVTLWYRAPEVLLQS 194

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 205
           L++L  L  + +   +H D+K  N++L    + P +V ++D+G A  
Sbjct: 159 LRILDILEYIHEHEYVHGDIKASNLLL--NYKNPDQVYLVDYGLAYR 203

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 11/85 (12%)

Query: 151 PAPPGNV---TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 207
                 V     Q+L  L    +  ++H DLKP+N+ L++   Q   +K+ DFG A    
Sbjct: 104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNL-LINKRGQ---LKLGDFGLARAFG 159

Query: 208 KAVCNTYLQ---SRYYRAPEIILGE 229
             V NT+     + +YRAP++++G 
Sbjct: 160 IPV-NTFSSEVVTLWYRAPDVLMGS 183

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 9/75 (12%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ- 216
             Q+L  L  L    ++H DLKP+NI LV    Q   +K+ DFG A   S  +       
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNI-LVTSSGQ---IKLADFGLARIYSFQM--ALTSV 179

Query: 217 --SRYYRAPEIILGE 229
             + +YRAPE++L  
Sbjct: 180 VVTLWYRAPEVLLQS 194

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 19/79 (24%)

Query: 160 QVLTALLKL-KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCN 212
           ++++AL  L  +  +++ DLK EN+ML D       +K+ DFG            K  C 
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLML-DKDGH---IKITDFGLCKEGIKDGATMKTFCG 311

Query: 213 T--YLQSRYYRAPEIILGE 229
           T  YL      APE++   
Sbjct: 312 TPEYL------APEVLEDN 324

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH 205
            ++L AL  L +   +H ++  ENI +        +V +  +G A  
Sbjct: 166 CRLLDALEFLHENEYVHGNVTAENIFV--DPEDQSQVTLAGYGFAFR 210

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 11/77 (14%)

Query: 157 VTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ 216
           +  +VL  L  L + G IH D+K  NI+L +       V++ DFG ++ ++     T  +
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG----SVQIADFGVSAFLATGGDITRNK 181

Query: 217 SR-------YYRAPEII 226
            R        + APE++
Sbjct: 182 VRKTFVGTPCWMAPEVM 198

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 10/62 (16%)

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQS------RYYRAPEIIL 227
            H DLK +NI+    V++     + D G A           +        + Y  PE++ 
Sbjct: 164 AHRDLKSKNIL----VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219

Query: 228 GE 229
             
Sbjct: 220 ES 221

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 20/66 (30%)

Query: 172 GLIHADLKPENIMLVDPVRQPYRVKVIDFG-----------SASHVSKAVCNTYLQSRYY 220
           G++H DLK +N+   D      +V + DFG                 +           +
Sbjct: 150 GILHKDLKSKNV-FYD----NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC----H 200

Query: 221 RAPEII 226
            APEII
Sbjct: 201 LAPEII 206

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIML-VDPVRQPYRVKVIDFGSA 203
           Q+++ +  +    LI+ D+KPEN ++     +    + +IDF  A
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ- 216
            L  L  L  L Q  ++H DLKP N+ L+D       +K+ DFG A          Y   
Sbjct: 118 MLMTLQGLEYLHQHWILHRDLKPNNL-LLDENGV---LKLADFGLAKSFGSPN-RAYTHQ 172

Query: 217 --SRYYRAPEIILG 228
             +R+YRAPE++ G
Sbjct: 173 VVTRWYRAPELLFG 186

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIML-VDPVRQPYRVKVIDFGSA 203
           Q+L  +  + +  L++ D+KP+N ++     +    + V+DFG  
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 8/71 (11%), Positives = 17/71 (23%), Gaps = 10/71 (14%)

Query: 139 ATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI 198
           A   P P   +           +  A     + G+  +   P  +     V     V + 
Sbjct: 122 ADTSPSPVGAI------RAMQSLAAAADAAHRAGVALSIDHPSRVR----VSIDGDVVLA 171

Query: 199 DFGSASHVSKA 209
              +    +  
Sbjct: 172 YPATMPDANPQ 182

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.98
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.98
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.98
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.98
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.98
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.98
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.98
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.98
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.98
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.98
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.98
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.92
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.89
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.77
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.28
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.27
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.26
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.83
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.81
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.56
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.52
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.4
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.15
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.15
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.0
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.97
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.39
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.36
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.34
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.24
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.98
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.97
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.95
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.86
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.63
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.31
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	92.67
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.06
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	91.7
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	91.14
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.34

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.3e-45  Score=296.01  Aligned_cols=162  Identities=22%  Similarity=0.280  Sum_probs=138.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||++++....   .....+.+.+|+++|+.++||||+  .+++.+.  +...+|+|||||+
T Consensus        43 G~fg~V~~a~~~~~~~~~AiK~i~k~~~~---~~~~~~~~~~E~~il~~l~HpnIv--~l~~~~~--~~~~~yivmEy~~  115 (311)
T 4aw0_A           43 GSFSTVVLARELATSREYAIKILEKRHII---KENKVPYVTRERDVMSRLDHPFFV--KLYFTFQ--DDEKLYFGLSYAK  115 (311)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEEHHHCC---CHHHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--eCCEEEEEEecCC
Confidence            99999999999999999999999875432   234456789999999999999998  4555554  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..   .+.+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.+...   
T Consensus       116 gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl----~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          116 NGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTTTTC
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE----cCCCCEEEEEcCCceecCCCCCc
Confidence            9997777654   3569999999999999999999999999999999999999    88889999999999987532   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ...+.+||+.|||||++.+
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~  208 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTE  208 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHH
T ss_pred             ccccCcccCcccCCHHHHcC
Confidence             3456799999999999865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.9e-44  Score=290.41  Aligned_cols=172  Identities=19%  Similarity=0.143  Sum_probs=140.6

Q ss_pred             ccceeecc---cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--
Q psy11822         44 ARKYIFNC---LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--  118 (229)
Q Consensus        44 ~~~~~~~~---~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--  118 (229)
                      ++++.+..   .|+||.||+|.+..++..||+|++......    ....+.+.+|+++|++++||||+  .+++++..  
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIV--~~~~~~~~~~   98 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT----KSERQRFKEEAEMLKGLQHPNIV--RFYDSWESTV   98 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC----HHHHHHHHHHHHHHHTCCCTTBC--CEEEEEEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC----HHHHHHHHHHHHHHHhCCCCCCC--cEEEEEeecc
Confidence            44555543   399999999999999999999998754322    12245689999999999999998  45555432  


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCC-CCccE
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVR-QPYRV  195 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~-~~~~~  195 (229)
                      .....+|+|||||++|+|..++..   ...+++.+++.++.||+.||+|||+++  ||||||||+|||+    + .++.+
T Consensus        99 ~~~~~~~lvmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl----~~~~g~v  171 (290)
T 3fpq_A           99 KGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----TGPTGSV  171 (290)
T ss_dssp             TTEEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEE----SSTTSCE
T ss_pred             CCCcEEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeE----ECCCCCE
Confidence            223457999999999998777655   356899999999999999999999998  9999999999999    5 36799


Q ss_pred             EEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||+|+........+.+||+.|||||++.+
T Consensus       172 Kl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~  204 (290)
T 3fpq_A          172 KIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE  204 (290)
T ss_dssp             EECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT
T ss_pred             EEEeCcCCEeCCCCccCCcccCccccCHHHcCC
Confidence            999999998776666677899999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.8e-44  Score=294.43  Aligned_cols=159  Identities=25%  Similarity=0.285  Sum_probs=137.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++..      .....+.+.+|+.+|+.++||||+  .+++++.  +...+|+|||||+
T Consensus        85 G~fG~V~~a~~~~tg~~vAiK~i~~~------~~~~~~~~~~Ei~il~~l~HpnIV--~l~~~~~--~~~~~~ivmEy~~  154 (346)
T 4fih_A           85 GSTGIVCIATVRSSGKLVAVKKMDLR------KQQRRELLFNEVVIMRDYQHENVV--EMYNSYL--VGDELWVVMEFLE  154 (346)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEGG------GCSSGGGGHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEECCCT
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEecC------chhHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEeCCC
Confidence            99999999999999999999998753      233456789999999999999998  4555554  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..++..    ..+++.+++.++.||+.||.|||++|||||||||+|||+    +.++.+||+|||+|+.+...  .
T Consensus       155 gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          155 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSSCC
T ss_pred             CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE----CCCCCEEEecCcCceecCCCCCc
Confidence            9998777654    469999999999999999999999999999999999999    88889999999999987543  4


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ..+.+||+.|||||++.++
T Consensus       227 ~~~~~GTp~YmAPEvl~~~  245 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRL  245 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTC
T ss_pred             ccccccCcCcCCHHHHCCC
Confidence            5678999999999998763

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.8e-44  Score=296.86  Aligned_cols=164  Identities=16%  Similarity=0.213  Sum_probs=132.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++.....    ....+.+.+|+++|++++||||+  .+++++.  +...+|+|||||+
T Consensus        35 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIV--~~~~~~~--~~~~~yiVmEy~~  106 (350)
T 4b9d_A           35 GSFGKAILVKSTEDGRQYVIKEINISRMS----SKEREESRREVAVLANMKHPNIV--QYRESFE--ENGSLYIVMDYCE  106 (350)
T ss_dssp             ----CEEEEEETTTCCEEEEEEEECTTSC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEehHHCC----HHHHHHHHHHHHHHHHCCCCCCC--cEEEEEE--ECCEEEEEEeCCC
Confidence            89999999999999999999998754322    12245679999999999999998  4555554  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..++.... ...+++.+++.|+.||+.||.|||++|||||||||+|||+    +.++.+||+|||+|+.+...  .
T Consensus       107 gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          107 GGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL----TKDGTVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             TCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE----CTTCCEEECSTTEESCCCHHHHH
T ss_pred             CCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE----CCCCCEEEcccccceeecCCccc
Confidence            999776654311 2347788899999999999999999999999999999999    88889999999999988654  3


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....+||+.|||||++.|+
T Consensus       182 ~~~~~GT~~YmAPE~l~~~  200 (350)
T 4b9d_A          182 ARACIGTPYYLSPEICENK  200 (350)
T ss_dssp             HHHHHSCCTTCCHHHHTTC
T ss_pred             ccccCCCccccCHHHHCCC
Confidence            3567899999999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.5e-43  Score=296.24  Aligned_cols=159  Identities=25%  Similarity=0.289  Sum_probs=137.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++..      .....+.+.+|+.+|+.++||||+  .+++++..  ...+|+|||||+
T Consensus       162 G~fG~V~~a~~~~tg~~vAiK~i~~~------~~~~~~~~~~Ei~il~~l~HpnIV--~l~~~~~~--~~~~~iVmEy~~  231 (423)
T 4fie_A          162 GSTGIVCIATVRSSGKLVAVKKMDLR------KQQRRELLFNEVVIMRDYQHENVV--EMYNSYLV--GDELWVVMEFLE  231 (423)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEST------TCSSGGGHHHHHHHHHHCCCTTBC--CEEEEEEE--TTEEEEEEECCT
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEecc------chhHHHHHHHHHHHHHhCCCCCCC--ceEEEEEE--CCEEEEEEeCCC
Confidence            99999999999999999999998753      133455788999999999999998  55555543  356899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..++..    ..+++.++..++.||+.||+|||++|||||||||+|||+    +.++.+||+|||+|+.+...  .
T Consensus       232 gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl----~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          232 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL----THDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE----CTTCCEEECCCTTCEECCSSCCC
T ss_pred             CCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEecCccceECCCCCcc
Confidence            9998777654    469999999999999999999999999999999999999    88889999999999987543  4


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ..+.+||+.|||||++.++
T Consensus       304 ~~~~~GTp~YmAPEvl~~~  322 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRL  322 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTC
T ss_pred             ccccccCcCcCCHHHHCCC
Confidence            5678999999999998763

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.3e-43  Score=283.43  Aligned_cols=162  Identities=22%  Similarity=0.335  Sum_probs=119.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++++.....   ......+.+|+.+++.++||||+  ++++++.  +...+|+||||++
T Consensus        24 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv--~~~~~~~--~~~~~~ivmEy~~   96 (275)
T 3hyh_A           24 GSFGKVKLAYHTTTGQKVALKIINKKVLAK---SDMQGRIEREISYLRLLRHPHII--KLYDVIK--SKDEIIMVIEYAG   96 (275)
T ss_dssp             ---CCEEEEECTTTCCEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEeHHHcCC---HHHHHHHHHHHHHHHHCCCCCCC--eEEEEEE--ECCEEEEEEeCCC
Confidence            999999999999999999999987643321   23345679999999999999998  5555554  3456899999996


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      |++++.+ ..   .+.+++.+++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+|+..... ..
T Consensus        97 g~L~~~l-~~---~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           97 NELFDYI-VQ---RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL----DEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             EEHHHHH-HH---SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTCCEEECCSSCC---------
T ss_pred             CCHHHHH-HH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE----CCCCCEEEeecCCCeecCCCCcc
Confidence            5444444 33   3469999999999999999999999999999999999999    88889999999999877554 44


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.+||+.|||||++.++
T Consensus       169 ~~~~GT~~Y~APE~~~~~  186 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGK  186 (275)
T ss_dssp             ------CTTSCHHHHSSS
T ss_pred             CCeeECcccCChhhhcCC
Confidence            568999999999999763

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=9.1e-43  Score=282.42  Aligned_cols=166  Identities=22%  Similarity=0.185  Sum_probs=122.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----------cc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----------VK  122 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----------~~  122 (229)
                      |+||+||+|++..+|+.||||+++....     ....+.+.+|+++|++++||||+.  +++.+...+          ..
T Consensus        16 G~fg~V~~a~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~E~~il~~l~HpnIV~--~~~~~~~~~~~~~~~~~~~~~   88 (299)
T 4g31_A           16 GGFGVVFEAKNKVDDCNYAIKRIRLPNR-----ELAREKVMREVKALAKLEHPGIVR--YFNAWLEKNTTEKLQPSSPKV   88 (299)
T ss_dssp             CC--EEEEEEETTTCCEEEEEEEEECSS-----HHHHHHHHHHHHHHTTCCCTTBCC--EEEEEEEEC----------CE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCCCe--EEEEEEecCccccccccCCCc
Confidence            9999999999999999999999865321     122346789999999999999984  444332211          22


Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      .+|+|||||++|+|..++.........++..++.++.||++||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl----~~~~~vKl~DFGl  164 (299)
T 4g31_A           89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGL  164 (299)
T ss_dssp             EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE----CCCCcEEEccCcc
Confidence            468999999999987776653322223333477899999999999999999999999999999    8888999999999


Q ss_pred             ceecCcc--------------cccceeecccCCCCccccCC
Q psy11822        203 ASHVSKA--------------VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       203 a~~~~~~--------------~~~~~~gt~~y~aPE~l~~~  229 (229)
                      |+.+...              ...+.+||+.|||||++.++
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTC
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence            9877542              12346899999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.8e-43  Score=284.32  Aligned_cols=162  Identities=20%  Similarity=0.255  Sum_probs=127.2

Q ss_pred             CCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||+||+|++.   .+++.||+|++++....    .....++.+|+++|++++||||+  .+++++.  +...+|+|||
T Consensus        35 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIv--~l~~~~~--~~~~~~ivmE  106 (304)
T 3ubd_A           35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLK----VRDRVRTKMERDILVEVNHPFIV--KLHYAFQ--TEGKLYLILD  106 (304)
T ss_dssp             GGGCEEEEEEECSSTTTTCEEEEEEEESEEEE----EEECC------CCCCCCCCTTEE--CEEEEEE--ETTEEEEEEC
T ss_pred             CCCeEEEEEEEccCCCCCEEEEEEEEehHHcC----hHHHHHHHHHHHHHHHCCCCCCC--eEEEEEE--ECCEEEEEEE
Confidence            999999999864   46889999998753211    12234678999999999999998  4555554  3456899999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      ||++|+|..++..   .+.+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.....
T Consensus       107 y~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          107 FLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             CCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTSCEEEESSEEEEC----
T ss_pred             cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE----cCCCCEEecccccceeccCC
Confidence            9999998777655   3569999999999999999999999999999999999999    88889999999999876432


Q ss_pred             --cccceeecccCCCCccccCC
Q psy11822        210 --VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~~  229 (229)
                        ...+.+||+.|||||++.++
T Consensus       180 ~~~~~~~~GT~~YmAPE~~~~~  201 (304)
T 3ubd_A          180 EKKAYSFCGTVEYMAPEVVNRR  201 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTS
T ss_pred             CccccccccCcccCCHHHhccC
Confidence              44578999999999998763

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=8.1e-43  Score=285.69  Aligned_cols=155  Identities=20%  Similarity=0.185  Sum_probs=129.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++.+       .    ...+|+.+++.++||||+  .+++++.  +...+|+|||||+
T Consensus        69 G~fG~Vy~a~~~~~g~~vAiK~i~~~-------~----~~~~E~~il~~l~HpnIV--~l~~~~~--~~~~~~ivmEy~~  133 (336)
T 4g3f_A           69 GSFGEVHRMKDKQTGFQCAVKKVRLE-------V----FRVEELVACAGLSSPRIV--PLYGAVR--EGPWVNIFMELLE  133 (336)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEETT-------T----CCTHHHHTTTTCCCTTBC--CEEEEEE--ETTEEEEEECCCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEECHH-------H----hHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEeccC
Confidence            99999999999999999999998752       1    226799999999999998  4555544  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceecCccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKAV-  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~~~~~-  210 (229)
                      +|+|..++..   .+.+++.+++.++.||+.||.|||++|||||||||+|||+    +.++ .+||+|||+|+.+.... 
T Consensus       134 gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          134 GGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE----CTTSCCEEECCCTTCEEC-----
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE----eCCCCEEEEeeCCCCeEccCCCc
Confidence            9998777665   3569999999999999999999999999999999999999    6666 69999999999875431 


Q ss_pred             ------ccceeecccCCCCccccCC
Q psy11822        211 ------CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ------~~~~~gt~~y~aPE~l~~~  229 (229)
                            ....+||+.|||||++.|+
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~  231 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGK  231 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTC
T ss_pred             ccceecCCccccCccccCHHHHCCC
Confidence                  2346899999999999874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.5e-41  Score=274.99  Aligned_cols=162  Identities=17%  Similarity=0.199  Sum_probs=129.4

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .++..||||+++...      ....+.|.+|+++|++++||||+  .+++++.  +...+++|
T Consensus        24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~------~~~~~~f~~E~~il~~l~HpnIV--~l~g~~~--~~~~~~lV   93 (299)
T 4asz_A           24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDAS------DNARKDFHREAELLTNLQHEHIV--KFYGVCV--EGDPLIMV   93 (299)
T ss_dssp             --CCCEEEEEECSCC----CEEEEEEEECSCC------HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--SSSSEEEE
T ss_pred             CCCcEEEEEEECCcccCCCCEEEEEEEeCCCC------hHHHHHHHHHHHHHHhCCCCCCc--cEEEEEe--eCCEEEEE
Confidence            999999999864     358899999987532      22345689999999999999998  4555544  44568999


Q ss_pred             eeeeeCCCCCccCCCC----------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEE
Q psy11822        128 MEVTRRSQYTGATAPP----------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKV  197 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~----------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl  197 (229)
                      ||||++|+|..++...          .+...+++.++..|+.||++||.|||+++||||||||+|||+    +.++.+||
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl----~~~~~~Ki  169 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----GENLLVKI  169 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE----CCCCcEEE
Confidence            9999999987765431          123468999999999999999999999999999999999999    88899999


Q ss_pred             eecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        198 IDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       198 ~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      +|||+|+.....    ......||+.|||||++.+
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  204 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  204 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcC
Confidence            999999876543    2234689999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.8e-41  Score=273.10  Aligned_cols=159  Identities=18%  Similarity=0.112  Sum_probs=125.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++.   ..||||+++.....    ....+.|.+|+.++++++||||+.  +++++.   ...+++|||||
T Consensus        46 ~G~fG~Vy~~~~~---~~vAvK~~~~~~~~----~~~~~~f~~E~~il~~l~HpNIV~--l~g~~~---~~~~~iVmEy~  113 (307)
T 3omv_A           46 SGSFGTVYKGKWH---GDVAVKILKVVDPT----PEQFQAFRNEVAVLRKTRHVNILL--FMGYMT---KDNLAIVTQWC  113 (307)
T ss_dssp             CCSSSEEEEEESS---SEEEEEECCCSSCC----HHHHHHHHHHHHHHTTCCCTTBCC--EEEEEC---SSSCEEEEECC
T ss_pred             eCCCcEEEEEEEC---CcEEEEEEEecCCC----HHHHHHHHHHHHHHHhCCCCCEee--EEEEEE---CCeEEEEEEcC
Confidence            3999999999875   35999998642211    123457899999999999999984  455432   23579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|+|..++...  ...+++.++..|+.||+.||.|||+++||||||||+|||+    +.++.+||+|||+|+.....  
T Consensus       114 ~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl----~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          114 EGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL----HEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             SSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE----ETTEEEEECCCSSCBC------
T ss_pred             CCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE----CCCCcEEEeeccCceecccCCc
Confidence            999987765432  2358999999999999999999999999999999999999    88889999999999876432  


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        .....+||+.|||||++.+
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~  208 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRM  208 (307)
T ss_dssp             ------CCCCTTSCCHHHHHC
T ss_pred             ceeecccccCCCccCHHHhhc
Confidence              3356799999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7e-41  Score=281.01  Aligned_cols=162  Identities=22%  Similarity=0.307  Sum_probs=130.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|++..+|+.||||+++.....    ....+.+.+|+++|+.++||||+.  +++++..    .+...+|+||
T Consensus        65 G~fG~V~~a~~~~t~~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~--l~~~~~~~~~~~~~~~~~ivm  138 (398)
T 4b99_A           65 GAYGVVSSARRRLTGQQVAIKKIPNAFDV----VTNAKRTLRELKILKHFKHDNIIA--IKDILRPTVPYGEFKSVYVVL  138 (398)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEETTTTSS----HHHHHHHHHHHHHHHHCCCTTBCC--EEEECCCSSCTTTCCCEEEEE
T ss_pred             ccCeEEEEEEECCCCCEEEEEEECccccc----hHHHHHHHHHHHHHHhcCCCCcce--EeeeeecccccccCCEEEEEE
Confidence            99999999999999999999998753221    112345689999999999999984  4443321    2335689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |||+++++..+ ..   .+.+++.+++.++.||+.||.|||++|||||||||+|||+    +.++.+||+|||+|+.+..
T Consensus       139 E~~~g~L~~~i-~~---~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~----~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          139 DLMESDLHQII-HS---SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV----NENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             ECCSEEHHHHH-TS---SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEECCCTTCBCC--
T ss_pred             eCCCCCHHHHH-Hh---cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc----CCCCCEEEeecceeeeccc
Confidence            99986544444 43   3579999999999999999999999999999999999999    8888999999999987643


Q ss_pred             c------cccceeecccCCCCccccC
Q psy11822        209 A------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .      ...+.+||+.|||||++.|
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~  236 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLS  236 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTT
T ss_pred             CccccccccccceeChHhcCHHHhcC
Confidence            2      3356799999999999876

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.7e-41  Score=274.28  Aligned_cols=163  Identities=20%  Similarity=0.199  Sum_probs=124.4

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .+++.||||+++...      ....+.|.+|+++|++++||||+  .+++++.  +...+++|
T Consensus        52 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~------~~~~~~f~~E~~il~~l~HpnIV--~l~g~~~--~~~~~~lV  121 (329)
T 4aoj_A           52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEAS------ESARQDFQREAELLTMLQHQHIV--RFFGVCT--EGRPLLMV  121 (329)
T ss_dssp             CSSEEEEEEEESSSCC---CEEEEEEEESCCS------HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--SSSSEEEE
T ss_pred             CCCcEEEEEEECCcccCCCCeEEEEEEECcCC------HHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEE
Confidence            999999999864     468899999987532      22345689999999999999998  4555543  44568999


Q ss_pred             eeeeeCCCCCccCCCCC------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccE
Q psy11822        128 MEVTRRSQYTGATAPPP------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                      ||||++|+|..++....            ....+++.++..|+.||++||.|||+++||||||||+|||+    +.++.+
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl----~~~~~~  197 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV----GQGLVV  197 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEE
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE----CCCCcE
Confidence            99999999876654321            12458888899999999999999999999999999999999    788899


Q ss_pred             EEeecCcceecCcc----cccceeecccCCCCccccCC
Q psy11822        196 KVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       196 kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ||+|||+|+.....    .....+||+.|||||++.++
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~  235 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR  235 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTC
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCC
Confidence            99999999876443    22456899999999998763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.1e-40  Score=271.12  Aligned_cols=163  Identities=18%  Similarity=0.198  Sum_probs=129.8

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .+++.||||+++...     .....+.|.+|+.++++++||||+  .+++++.  +...+++|
T Consensus        37 G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-----~~~~~~~f~~E~~il~~l~HpNIV--~l~g~~~--~~~~~~lV  107 (308)
T 4gt4_A           37 DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-----EGPLREEFRHEAMLRARLQHPNVV--CLLGVVT--KDQPLSMI  107 (308)
T ss_dssp             CSSCEEEEEEEC-------CEEEEEEECCC-C-----CC-CHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             CCCcEEEEEEEcCCccCCCCeEEEEEEECccc-----ChHHHHHHHHHHHHHHhCCCCCCC--CcceEEE--ECCEEEEE
Confidence            999999999863     467899999987531     123345789999999999999998  4555543  44568999


Q ss_pred             eeeeeCCCCCccCCCCCC-------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc
Q psy11822        128 MEVTRRSQYTGATAPPPP-------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      ||||++|+|..++....+             ...+++.++..|+.||++||.|||+++||||||||+|||+    +.++.
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~~  183 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV----YDKLN  183 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGC
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE----CCCCC
Confidence            999999997766533211             2347778889999999999999999999999999999999    88899


Q ss_pred             EEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||+|+.....    .....+||+.|||||++.+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  221 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY  221 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhC
Confidence            999999999876443    2345789999999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.2e-40  Score=290.66  Aligned_cols=164  Identities=17%  Similarity=0.185  Sum_probs=135.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++++................+++.+++.++||||+  .+++.+.  +...+|+|||||+
T Consensus       200 G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV--~l~~~f~--~~~~lylVmEy~~  275 (689)
T 3v5w_A          200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV--CMSYAFH--TPDKLSFILDLMN  275 (689)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEe--EEEEEEE--ECCEEEEEEecCC
Confidence            99999999999999999999999875443221111122224456777888999998  4554544  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ||+|..++..   .+.+++..++.++.||+.||.|||++|||||||||+|||+    +.+|.+||+|||+|+.+......
T Consensus       276 GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl----d~~G~vKL~DFGlA~~~~~~~~~  348 (689)
T 3v5w_A          276 GGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKPH  348 (689)
T ss_dssp             SCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSCCCC
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE----eCCCCEEecccceeeecCCCCCC
Confidence            9997777655   3569999999999999999999999999999999999999    88899999999999998877777


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      +.+||+.|||||++.
T Consensus       349 t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          349 ASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             SCCSCGGGCCHHHHS
T ss_pred             CccCCcCccCHHHHh
Confidence            889999999999985

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.4e-40  Score=268.12  Aligned_cols=157  Identities=18%  Similarity=0.132  Sum_probs=124.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc--cccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN--NVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~--~~~~~~lv~e~  130 (229)
                      |+||.||+|++  +|+.||||+++.....       ....++|+..+..++||||+  .+++++...  ....+|+||||
T Consensus        14 G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-------~~~~e~Ei~~~~~l~HpNIv--~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A           14 GRFGEVWRGKW--RGEEVAVKIFSSREER-------SWFREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             CSSSEEEEEEE--TTEEEEEEEECGGGHH-------HHHHHHHHHTSTTCCCTTBC--CEEEEEEEECSSSEEEEEEEEC
T ss_pred             CCCeEEEEEEE--CCEEEEEEEECccchh-------hHHHHHHHHHHhcCCCCCCC--cEEEEEEecCCCceEEEEEecC
Confidence            99999999997  4899999998764221       11235688888899999998  455444322  22357999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC--------CCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL--------GLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~--------~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      |++|+|..++..    ..++++++..++.|++.||+|||++        +||||||||+|||+    +.++.+||+|||+
T Consensus        83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl----~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGL  154 (303)
T ss_dssp             CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTT
T ss_pred             CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE----CCCCCEEEEeCCC
Confidence            999998777654    3588889999999999999999987        89999999999999    8889999999999


Q ss_pred             ceecCcc------cccceeecccCCCCccccC
Q psy11822        203 ASHVSKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+.....      .....+||+.|||||++.+
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~  186 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             CEEEETTTTEESCC-----CCGGGCCHHHHTT
T ss_pred             CccccCCCCceeeecccccccccccCHHHhcc
Confidence            9877543      1234689999999999865

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=9e-39  Score=265.33  Aligned_cols=154  Identities=18%  Similarity=0.198  Sum_probs=124.0

Q ss_pred             CCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++.   .+++.||+|.+.+.        ....++.+|+++|+.+ +||||+  .+.+.+.  +...+|+||
T Consensus        32 G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--------~~~~~~~~E~~~l~~~~~h~nIv--~l~~~~~--~~~~~~lvm   99 (361)
T 4f9c_A           32 GTFSSVYLATAQLQVGPEEKIALKHLIPT--------SHPIRIAAELQCLTVAGGQDNVM--GVKYCFR--KNDHVVIAM   99 (361)
T ss_dssp             CSSEEEEEEEEEBTTSCEEEEEEEEECTT--------SCHHHHHHHHHHHHHTCSBTTBC--CCSEEEE--ETTEEEEEE
T ss_pred             ccCcEEEEEEEcccCCCCCEEEEEEEccc--------cCHHHHHHHHHHHHHhcCCCCCc--eEEEEEE--ECCEEEEEE
Confidence            999999999864   46889999987653        1223567899999888 799997  4555554  345689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~~~~  207 (229)
                      ||+++|+|..++.      .+++.+++.++.|++.||+|||++||+||||||+|||+    +.+ +.+||+|||+|+...
T Consensus       100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl----~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A          100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLY----NRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----ETTTTEEEECCCTTCEECT
T ss_pred             eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEE----eCCCCeEEECcCCCCcccC
Confidence            9999999777664      38889999999999999999999999999999999999    444 699999999998653


Q ss_pred             cc------------------------------cccceeecccCCCCccccC
Q psy11822        208 KA------------------------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~------------------------------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..                              ...+.+||++|||||++.+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~  220 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK  220 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence            32                              1234589999999999875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8.9e-39  Score=264.16  Aligned_cols=164  Identities=19%  Similarity=0.132  Sum_probs=128.2

Q ss_pred             CCceeeeeeecCC-----CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-ccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLE-----GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++..     +++.||||.++.....     ...+.+.+|+.+|+++.| |||+  .+++++.. ....+++
T Consensus        75 G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-----~~~~~~~~E~~il~~l~hhpnIV--~l~g~~~~-~~~~~~i  146 (353)
T 4ase_A           75 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-----SEHRALMSELKILIHIGHHLNVV--NLLGACTK-PGGPLMV  146 (353)
T ss_dssp             CSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEECC-TTSCCEE
T ss_pred             CCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-----HHHHHHHHHHHHHHHcCCCCcEE--EEEEEEEe-cCCEEEE
Confidence            9999999998654     3468999998753211     123467899999999965 8997  45544321 2245799


Q ss_pred             eeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        127 MMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      |||||++|+|..++....             ....+++.++..++.||++||.|||+++||||||||+|||+    +.++
T Consensus       147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl----~~~~  222 (353)
T 4ase_A          147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKN  222 (353)
T ss_dssp             EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGG
T ss_pred             EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee----CCCC
Confidence            999999999766653211             12347888889999999999999999999999999999999    8888


Q ss_pred             cEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+|+.+...    .....+||+.|||||++.+
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  261 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  261 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhc
Confidence            9999999999977443    2346789999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.5e-38  Score=273.92  Aligned_cols=163  Identities=23%  Similarity=0.294  Sum_probs=134.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++......      ..+.+.+|+.+|+.++||||+  ++++.+.  +...+|+|||||+
T Consensus       168 G~fg~V~~~~~~~tg~~~AiK~i~~~~~~------~~~~~~~Ei~il~~l~hpnIv--~l~~~~~--~~~~~~iv~E~~~  237 (573)
T 3uto_A          168 GAFGVVHRVTERATGNNFAAKFVMTPHES------DKETVRKEIQTMSVLRHPTLV--NLHDAFE--DDNEMVMIYEFMS  237 (573)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCSHH------HHHHHHHHHHHHHHTCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEeccchh------hHHHHHHHHHHHHhCCCCCCC--eEEEEEE--ECCEEEEEEeecC
Confidence            89999999999999999999998753221      234568999999999999998  4555554  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|...+...  ...+++.+++.++.||+.||.|||++||+||||||+|||+...  ..+.+||+|||+|+.+... ..
T Consensus       238 gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~--~~~~vKl~DFG~a~~~~~~~~~  313 (573)
T 3uto_A          238 GGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK--RSNELKLIDFGLTAHLDPKQSV  313 (573)
T ss_dssp             CCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS--SCCCEEECCCSSCEECCTTSEE
T ss_pred             CCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC--CCCCEEEeeccceeEccCCCce
Confidence            99975554331  3469999999999999999999999999999999999999321  2469999999999988654 44


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ...+||+.|||||++.++
T Consensus       314 ~~~~GT~~y~APEv~~~~  331 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEGK  331 (573)
T ss_dssp             EEECSSGGGCCHHHHTTC
T ss_pred             eeeEECccccCHHHhCCC
Confidence            677999999999999764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.7e-35  Score=243.00  Aligned_cols=161  Identities=19%  Similarity=0.288  Sum_probs=133.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++......    ....+.+.+|+++++.++||||+  .+++++.  +....|+||||++
T Consensus        26 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv--~l~~~~~--~~~~~~lv~e~~~   97 (328)
T 3fe3_A           26 GNFAKVKLARHILTGREVAIKIIDKTQLN----PTSLQKLFREVRIMKILNHPNIV--KLFEVIE--TEKTLYLIMEYAS   97 (328)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEGGGSC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEhhcCC----HHHHHHHHHHHHHHHhCCCCCEe--eEEEEEE--ECCEEEEEEECCC
Confidence            99999999999999999999998764321    12234568999999999999997  4555543  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++..++..   .+.+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... ..
T Consensus        98 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           98 GGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL----DADMNIKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             TCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTCCGGGSSSCGG
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE----cCCCCEEEeeccCceecCCCCcc
Confidence            9997666543   2458888999999999999999999999999999999999    88889999999999876543 44


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       171 ~~~~gt~~y~aPE~~~~  187 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQG  187 (328)
T ss_dssp             GTTSSSGGGCCHHHHHT
T ss_pred             ccccCCcceeCcccccC
Confidence            66789999999999865

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1e-34  Score=239.25  Aligned_cols=162  Identities=21%  Similarity=0.220  Sum_probs=134.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++++....   .......+.+|+.+++.++||||+.  +++.+.  +....|+||||++
T Consensus        16 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~--l~~~~~--~~~~~~lv~E~~~   88 (337)
T 1o6l_A           16 GTFGKVILVREKATGRYYAMKILRKEVII---AKDEVAHTVTESRVLQNTRHPFLTA--LKYAFQ--THDRLCFVMEYAN   88 (337)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHSCCCTTBCC--EEEEEE--CSSEEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEeHHHhh---hhhHHHHHHHHHHHHHhCCCCcCcc--eEEEEE--eCCEEEEEEeCCC
Confidence            99999999999999999999999875332   2334556789999999999999984  444443  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AV  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~~  210 (229)
                      +|+|...+..   ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....  ..
T Consensus        89 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           89 GGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             TCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE----CCCCCEEEeeccchhhcccCCCc
Confidence            9997666544   3458888999999999999999999999999999999999    8888999999999986432  24


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+||+.|+|||++.+
T Consensus       162 ~~~~~gt~~y~aPE~~~~  179 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             BCCCEECGGGCCGGGGSS
T ss_pred             ccccccChhhCChhhhcC
Confidence            467899999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.9e-34  Score=233.33  Aligned_cols=166  Identities=17%  Similarity=0.220  Sum_probs=131.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHH--------------------HHhhhhhhhhccccccccccCccccceeh
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLL--------------------KRMLTMDQVERRITPGEALNHAFVTLAHL  112 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~--------------------~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~  112 (229)
                      |+||.||+|++..+++.||+|++........                    ......+.+.+|+.+++.++||||+  .+
T Consensus        24 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv--~~  101 (298)
T 2zv2_A           24 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVV--KL  101 (298)
T ss_dssp             --CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBC--CE
T ss_pred             cCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCC--eE
Confidence            9999999999999999999999865322110                    0112245678999999999999997  45


Q ss_pred             hhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC
Q psy11822        113 VDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP  192 (229)
Q Consensus       113 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~  192 (229)
                      ++++...+....++||||++++++..+...    ..+++.++..++.|++.||.|||++||+||||||+|||+    +.+
T Consensus       102 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~  173 (298)
T 2zv2_A          102 VEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----GED  173 (298)
T ss_dssp             EEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTT
T ss_pred             EEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE----CCC
Confidence            555544445568999999999998776543    468888999999999999999999999999999999999    778


Q ss_pred             ccEEEeecCcceecCcc--cccceeecccCCCCccccC
Q psy11822        193 YRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      +.+||+|||+++.....  ......||+.|+|||++.+
T Consensus       174 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  211 (298)
T 2zv2_A          174 GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSE  211 (298)
T ss_dssp             SCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCT
T ss_pred             CCEEEecCCCccccccccccccCCcCCccccChhhhcc
Confidence            89999999999887543  3356789999999999865

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=241.80  Aligned_cols=163  Identities=18%  Similarity=0.220  Sum_probs=136.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+++.||+|++.+....   .......+.+|+.+++.++||||+  .+++++.  +....|+||||+
T Consensus        25 ~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~---~~~~~~~~~~E~~il~~l~hp~Iv--~l~~~~~--~~~~~~lv~e~~   97 (384)
T 4fr4_A           25 KGSFGKVCIVQKNDTKKMYAMKYMNKQKCV---ERNEVRNVFKELQIMQGLEHPFLV--NLWYSFQ--DEEDMFMVVDLL   97 (384)
T ss_dssp             CCTTCCEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCCEEEEEEEehhhcc---cHHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--eCCEEEEEEecC
Confidence            399999999999999999999998775332   233455778999999999999998  4444443  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      .+|+|..++..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+..... .
T Consensus        98 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           98 LGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL----DEHGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             TTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTCC
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE----CCCCCEEEeccceeeeccCCCc
Confidence            99998776655   3468888999999999999999999999999999999999    88889999999999987543 4


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+||+.|+|||++.+
T Consensus       171 ~~~~~gt~~Y~aPE~~~~  188 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSS  188 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCC
T ss_pred             eeccCCCccccCCeeecc
Confidence            467899999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.7e-35  Score=240.79  Aligned_cols=162  Identities=22%  Similarity=0.248  Sum_probs=129.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|+.+++.+ +||||+  .+++++.  +...+|+||||+
T Consensus        34 G~fg~V~~~~~~~~~~~~AvK~~~~~~~~---~~~~~~~~~~E~~il~~~~~hp~Iv--~l~~~~~--~~~~~~lv~E~~  106 (353)
T 3txo_A           34 GSFGKVMLARVKETGDLYAVKVLKKDVIL---QDDDVECTMTEKRILSLARNHPFLT--QLFCCFQ--TPDRLFFVMEFV  106 (353)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEHHHHH---HHTTHHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             CCCEEEEEEEEcCCCCEEEEEEEEHHHhc---chhHHHHHHHHHHHHHhccCCCcee--eEEEEEE--eCCEEEEEEeCC
Confidence            99999999999999999999999875332   223445668899999887 799998  4444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+....  .
T Consensus       107 ~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl----~~~g~ikL~DFG~a~~~~~~~~  179 (353)
T 3txo_A          107 NGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL----DHEGHCKLADFGMCKEGICNGV  179 (353)
T ss_dssp             CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCC---
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE----CCCCCEEEccccceeecccCCc
Confidence            99997666554   3468899999999999999999999999999999999999    8888999999999986433  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       180 ~~~~~~gt~~y~aPE~~~~  198 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQE  198 (353)
T ss_dssp             ------CCGGGCCHHHHHH
T ss_pred             cccccCCCcCeEChhhcCC
Confidence            4456789999999998753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=9.1e-35  Score=245.22  Aligned_cols=161  Identities=19%  Similarity=0.225  Sum_probs=134.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++++....   .....+.+.+|+.+++.++||||+  .+++++.  +...+|+||||++
T Consensus        80 G~fG~V~~~~~~~~~~~~AiK~~~k~~~~---~~~~~~~~~~E~~il~~l~hp~Iv--~l~~~~~--~~~~~~lV~E~~~  152 (410)
T 3v8s_A           80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMI---KRSDSAFFWEERDIMAFANSPWVV--QLFYAFQ--DDRYLYMVMEYMP  152 (410)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HTCCCSTHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEehhhhh---hhHHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--ECCEEEEEEeCCC
Confidence            99999999999999999999999874322   233445678999999999999998  4444443  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..    ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus       153 gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFG~a~~~~~~~~~  224 (410)
T 3v8s_A          153 GGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGMV  224 (410)
T ss_dssp             TEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSEE
T ss_pred             CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE----CCCCCEEEeccceeEeeccCCcc
Confidence            9997766543    358888899999999999999999999999999999999    88899999999999887553   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       225 ~~~~~~gt~~Y~APE~l~~  243 (410)
T 3v8s_A          225 RCDTAVGTPDYISPEVLKS  243 (410)
T ss_dssp             ECCSCCSCGGGCCHHHHHT
T ss_pred             cccCCcCCccccCHHHhhc
Confidence            2346799999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-34  Score=235.43  Aligned_cols=161  Identities=22%  Similarity=0.285  Sum_probs=135.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|+.+++.++||||+  .+++.+.  +...+|+||||++
T Consensus        17 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~Iv--~~~~~~~--~~~~~~lv~e~~~   89 (318)
T 1fot_A           17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVV---RLKQVEHTNDERLMLSIVTHPFII--RMWGTFQ--DAQQIFMIMDYIE   89 (318)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHSCCBTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEHHHhh---hhhHHHHHHHHHHHHhhCCCCCCc--eEeEEEE--eCCEEEEEEeCCC
Confidence            99999999999999999999999875332   233455678899999999999997  4444443  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|+|..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++..... ..
T Consensus        90 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~Dfg~a~~~~~~-~~  161 (318)
T 1fot_A           90 GGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPDV-TY  161 (318)
T ss_dssp             SCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSSC-BC
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE----cCCCCEEEeecCcceecCCc-cc
Confidence            9997776654   3458888899999999999999999999999999999999    88889999999999876553 35


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ..+||+.|+|||++.+
T Consensus       162 ~~~gt~~y~aPE~~~~  177 (318)
T 1fot_A          162 TLCGTPDYIAPEVVST  177 (318)
T ss_dssp             CCCSCTTTCCHHHHTT
T ss_pred             cccCCccccCHhHhcC
Confidence            6789999999999875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=3.2e-34  Score=237.41  Aligned_cols=161  Identities=23%  Similarity=0.229  Sum_probs=135.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|+.+++.++||||+.  +++++.  +...+|+||||++
T Consensus        52 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~--~~~~~~--~~~~~~lv~e~~~  124 (350)
T 1rdq_E           52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIEHTLNEKRILQAVNFPFLVK--LEFSFK--DNSNLYMVMEYVA  124 (350)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHTTCCCTTBCC--EEEEEE--CSSEEEEEEECCT
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEEhHHhc---cHHHHHHHHHHHHHHHhCCCCCCCe--EEEEEE--cCCEEEEEEcCCC
Confidence            99999999999999999999999775332   2344567789999999999999974  444443  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|+|..++..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++..... ..
T Consensus       125 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFg~a~~~~~~-~~  196 (350)
T 1rdq_E          125 GGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGR-TW  196 (350)
T ss_dssp             TCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSC-BC
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE----CCCCCEEEcccccceeccCC-cc
Confidence            9997666554   2458888999999999999999999999999999999999    88889999999999977654 35


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ..+||+.|+|||++.+
T Consensus       197 ~~~gt~~y~aPE~~~~  212 (350)
T 1rdq_E          197 TLCGTPEALAPEIILS  212 (350)
T ss_dssp             CCEECGGGCCHHHHTT
T ss_pred             cccCCccccCHHHhcC
Confidence            6799999999999875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=8.7e-35  Score=241.73  Aligned_cols=169  Identities=23%  Similarity=0.261  Sum_probs=134.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.............+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        23 G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv--~l~~~~~--~~~~~~lv~e~~~   98 (361)
T 2yab_A           23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII--TLHDVYE--NRTDVVLILELVS   98 (361)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCC--cEEEEEE--eCCEEEEEEEcCC
Confidence            89999999999999999999998763211100011235678999999999999998  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++..   ...+++.++..++.||+.||.|||++||+||||||+|||+.........+||+|||++...... ..
T Consensus        99 gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~  175 (361)
T 2yab_A           99 GGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF  175 (361)
T ss_dssp             SCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCC
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCcc
Confidence            9997777655   3468999999999999999999999999999999999999332222238999999999887654 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       176 ~~~~gt~~y~aPE~~~~  192 (361)
T 2yab_A          176 KNIFGTPEFVAPEIVNY  192 (361)
T ss_dssp             CCCCSCGGGCCHHHHTT
T ss_pred             ccCCCCccEECchHHcC
Confidence            56789999999999875

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.5e-34  Score=237.60  Aligned_cols=162  Identities=21%  Similarity=0.239  Sum_probs=133.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|..++..+ +||||+  .+++++.  +...+|+||||+
T Consensus        28 G~fg~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~E~~il~~~~~hp~iv--~l~~~~~--~~~~~~lv~E~~  100 (345)
T 1xjd_A           28 GSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVEKRVLSLAWEHPFLT--HMFCTFQ--TKENLFFVMEYL  100 (345)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHHHTTCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEEhHHhh---hhhhHHHHHHHHHHHHhcCCCCCCC--cEEEEEE--eCCEEEEEEeCC
Confidence            99999999999999999999999875332   123344567888888876 999997  4444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+....  .
T Consensus       101 ~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  173 (345)
T 1xjd_A          101 NGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDA  173 (345)
T ss_dssp             TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE----CCCCCEEEeEChhhhhcccCCC
Confidence            99997766554   3458888999999999999999999999999999999999    8888999999999986532  3


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       174 ~~~~~~gt~~y~aPE~~~~  192 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLG  192 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccCCCCCcccCChhhhcC
Confidence            4467899999999999876

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-34  Score=235.22  Aligned_cols=168  Identities=21%  Similarity=0.215  Sum_probs=136.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|+++....     ....+.+.+|+.+++.++||||+  .+++++........++||||++
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~lv~e~~~   92 (319)
T 4euu_A           20 GATANVFRGRHKKTGDLFAIKVFNNISF-----LRPVDVQMREFEVLKKLNHKNIV--KLFAIEEETTTRHKVLIMEFCP   92 (319)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECGGGG-----GSCHHHHHHHHHHHHHCCCTTBC--CEEEEEECTTTCCEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCcEEEEEEeccccc-----cchHHHHHHHHHHHHhcCCCCcc--eEEEEeecCCCceEEEEEeCCC
Confidence            9999999999999999999999875321     22344567999999999999998  4555554444446799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++........+++.++..++.|++.||.|||++||+||||||+|||+....+..+.+||+|||+++..... ..
T Consensus        93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~  172 (319)
T 4euu_A           93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF  172 (319)
T ss_dssp             TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB
T ss_pred             CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce
Confidence            99977776653333348888999999999999999999999999999999998665566779999999999887554 33


Q ss_pred             cceeecccCCCCcccc
Q psy11822        212 NTYLQSRYYRAPEIIL  227 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~  227 (229)
                      ....||+.|+|||++.
T Consensus       173 ~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          173 VSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CCCCSCGGGCCHHHHH
T ss_pred             eecccCCCccCHHHhh
Confidence            5678999999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-34  Score=236.49  Aligned_cols=161  Identities=24%  Similarity=0.332  Sum_probs=132.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++......   .......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        20 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv--~l~~~~~--~~~~~~lv~E~~~   92 (336)
T 3h4j_B           20 GSFGKVKLATHYKTQQKVALKFISRQLLK---KSDMHMRVEREISYLKLLRHPHII--KLYDVIT--TPTDIVMVIEYAG   92 (336)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCSHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEehHHcc---chhHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--eCCEEEEEEECCC
Confidence            99999999999999999999998875332   233345678999999999999997  4555544  3345799999995


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++++.+...    ..+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... ..
T Consensus        93 g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~DFG~s~~~~~~~~~  164 (336)
T 3h4j_B           93 GELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL----DDNLNVKIADFGLSNIMTDGNFL  164 (336)
T ss_dssp             EEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE----CTTCCEEECCSSCTBTTTTSBTT
T ss_pred             CcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE----cCCCCEEEEEeccceeccCCccc
Confidence            5444444332    458889999999999999999999999999999999999    88889999999999877554 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       165 ~~~~gt~~y~aPE~~~~  181 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVING  181 (336)
T ss_dssp             CCCTTSTTTSCGGGSCC
T ss_pred             ccccCCcCcCCHHHHcC
Confidence            56789999999999876

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.4e-34  Score=242.91  Aligned_cols=163  Identities=20%  Similarity=0.226  Sum_probs=132.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||+|++++.....   ....+.+.+|+.++..+ +||||+  .+++++.  +...+|+||||+
T Consensus        63 G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~---~~~~~~~~~E~~il~~~~~hp~Iv--~l~~~~~--~~~~~~lV~E~~  135 (396)
T 4dc2_A           63 GSYAKVLLVRLKKTDRIYAMRVVKKELVND---DEDIDWVQTEKHVFEQASNHPFLV--GLHSCFQ--TESRLFFVIEYV  135 (396)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEEGGGTC-------CCHHHHHHHHHHHHTTCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEEhhhccC---HHHHHHHHHHHHHHHhcCCCCCcC--eeEEEEE--ECCEEEEEEEcC
Confidence            999999999999999999999988643221   22334567888888877 899998  4444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC--cc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KA  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~--~~  209 (229)
                      ++|+|...+..   ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+...  ..
T Consensus       136 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          136 NGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----CCCCCEEEeecceeeecccCCC
Confidence            99997666554   3468999999999999999999999999999999999999    888999999999998642  23


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .....+||+.|+|||++.++
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~  228 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGE  228 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTC
T ss_pred             ccccccCCcccCCchhhcCC
Confidence            45678999999999998763

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=9.5e-34  Score=243.05  Aligned_cols=162  Identities=23%  Similarity=0.296  Sum_probs=136.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++.....   .....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        27 G~fg~V~~a~~~~~g~~vAvK~i~~~~~~---~~~~~~~~~~Ei~~l~~l~HpnIv--~l~~~~~--~~~~~~lv~E~~~   99 (476)
T 2y94_A           27 GTFGKVKVGKHELTGHKVAVKILNRQKIR---SLDVVGKIRREIQNLKLFRHPHII--KLYQVIS--TPSDIFMVMEYVS   99 (476)
T ss_dssp             CSSSCEEEEEETTTCCEEEEEEEEHHHHH---HTTTHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEECCS
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEEhhhcc---CHHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEeCCC
Confidence            99999999999999999999999875332   233455778999999999999997  4454443  3356799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++..   ...+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... ..
T Consensus       100 gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll----~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A          100 GGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             SEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECCTTCCB
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE----ecCCCeEEEeccchhhccccccc
Confidence            9997777665   3468999999999999999999999999999999999999    88889999999999987653 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       173 ~~~~gt~~y~aPE~~~~  189 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISG  189 (476)
T ss_dssp             CCCCSCSTTCCHHHHTT
T ss_pred             cccCCCcCeEChhhccC
Confidence            56789999999999876

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6e-34  Score=241.95  Aligned_cols=162  Identities=16%  Similarity=0.152  Sum_probs=133.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++++....   .......+.+|+.++..++||||+.  +++++.  +...+|+||||++
T Consensus        85 G~fG~V~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~~~E~~il~~~~hp~Iv~--l~~~~~--~~~~~~lV~Ey~~  157 (437)
T 4aw2_A           85 GAFGEVAVVKLKNADKVFAMKILNKWEML---KRAETACFREERDVLVNGDSKWITT--LHYAFQ--DDNNLYLVMDYYV  157 (437)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEEHHHHH---HTTTTCCHHHHHHHHHHSCTTTBCC--EEEEEE--CSSEEEEEECCCT
T ss_pred             CCCEEEEEEEEcCCCcEEEEEEEEHHHhh---hHHHHHHHHHHHHHHHhCCCCCEEE--EEEEEe--eCCEEEEEEecCC
Confidence            99999999999999999999999874322   2333445788999999999999984  444443  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++...  ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus       158 gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----~~~g~vkL~DFGla~~~~~~~~~  231 (437)
T 4aw2_A          158 GGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDGTV  231 (437)
T ss_dssp             TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSCE
T ss_pred             CCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE----cCCCCEEEcchhhhhhcccCCCc
Confidence            99977665441  2358889999999999999999999999999999999999    88899999999999877543   


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      .....+||+.|+|||++.
T Consensus       232 ~~~~~~GT~~Y~APE~l~  249 (437)
T 4aw2_A          232 QSSVAVGTPDYISPEILQ  249 (437)
T ss_dssp             ECCSCCSCGGGCCHHHHH
T ss_pred             ccccccCCcCeeChHHHh
Confidence            223468999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=3.5e-34  Score=234.44  Aligned_cols=165  Identities=22%  Similarity=0.188  Sum_probs=127.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc-------------
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN-------------  119 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~-------------  119 (229)
                      |+||.||+|++..+|+.||||+++...     .....+.+.+|+.+++.++||||+.  +++++...             
T Consensus        17 G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~--~~~~~~~~~~~~~~~~~~~~~   89 (332)
T 3qd2_B           17 GGFGVVFEAKNKVDDCNYAIKRIRLPN-----RELAREKVMREVKALAKLEHPGIVR--YFNAWLETPPEKWQEEMDEIW   89 (332)
T ss_dssp             C-CSEEEEEEETTTCCEEEEEEEECCS-----TTTHHHHHHHHHHHHTSCCCTTBCC--EEEEEEECCSCHHHHHHHC--
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEeecCC-----chhHHHHHHHHHHHHHhCCCCCEee--EEEEEEEeccchhhhhhhhhh
Confidence            999999999999999999999986421     1223456789999999999999984  33332111             


Q ss_pred             ------------------------------------------cccccceeeeeeeCCCCCccCCCCCCCCccccCCccch
Q psy11822        120 ------------------------------------------NVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNV  157 (229)
Q Consensus       120 ------------------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i  157 (229)
                                                                .....++||||++++++..+..........++..++.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i  169 (332)
T 3qd2_B           90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI  169 (332)
T ss_dssp             ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHH
T ss_pred             hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHH
Confidence                                                      11237899999999998777666443333444447889


Q ss_pred             HHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--------------cccceeecccCCCC
Q psy11822        158 TLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--------------VCNTYLQSRYYRAP  223 (229)
Q Consensus       158 ~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--------------~~~~~~gt~~y~aP  223 (229)
                      +.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++.....              ......||+.|+||
T Consensus       170 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          170 FIQIAEAVEFLHSKGLMHRDLKPSNIFF----TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHhCCeeecCCCcccEEE----eCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence            9999999999999999999999999999    77789999999999887543              12345799999999


Q ss_pred             ccccC
Q psy11822        224 EIILG  228 (229)
Q Consensus       224 E~l~~  228 (229)
                      |++.+
T Consensus       246 E~~~~  250 (332)
T 3qd2_B          246 EQIHG  250 (332)
T ss_dssp             HHHHC
T ss_pred             HHhcC
Confidence            99865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.5e-34  Score=232.01  Aligned_cols=158  Identities=20%  Similarity=0.224  Sum_probs=132.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++....      ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        31 G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~  100 (297)
T 3fxz_A           31 GASGTVYTAMDVATGQEVAIRQMNLQQ------QPKKELIINEILVMRENKNPNIV--NYLDSYL--VGDELWVVMEYLA  100 (297)
T ss_dssp             ETTEEEEEEEBTTTCCEEEEEEEEGGG------CSCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCcEEEEEEeeccc------ccHHHHHHHHHHHHhcCCCCCCC--eEeEEEE--ECCEEEEEEECCC
Confidence            999999999999999999999986531      22344568899999999999997  4555444  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +++|..++..    ..+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......  .
T Consensus       101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  172 (297)
T 3fxz_A          101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  172 (297)
T ss_dssp             TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE----CCCCCEEEeeCCCceecCCcccc
Confidence            9998777654    358888899999999999999999999999999999999    78889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       173 ~~~~~gt~~y~aPE~~~~  190 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTR  190 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHC
T ss_pred             cCCccCCcCccChhhhcC
Confidence            356789999999999865

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=6.3e-34  Score=235.88  Aligned_cols=162  Identities=20%  Similarity=0.186  Sum_probs=133.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|..++..+ .||||+.  +.+.+.  +....|+||||+
T Consensus        31 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~---~~~~~~~~~~E~~~l~~~~~hp~iv~--l~~~~~--~~~~~~lv~E~~  103 (353)
T 2i0e_A           31 GSFGKVMLSERKGTDELYAVKILKKDVVI---QDDDVECTMVEKRVLALPGKPPFLTQ--LHSCFQ--TMDRLYFVMEYV  103 (353)
T ss_dssp             ETTEEEEEEEETTEEEEEEEEEEEHHHHH---HTTCHHHHHHHHHHHTCTTCCTTBCC--EEEEEE--CSSEEEEEEECC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEHHHhh---cchHHHHHHHHHHHHHhcCCCCEEee--EEEEEE--cCCEEEEEEeCC
Confidence            99999999999999999999999875332   233445678899999887 8999974  443433  335689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+....  .
T Consensus       104 ~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~vkL~DFG~a~~~~~~~~  176 (353)
T 2i0e_A          104 NGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGV  176 (353)
T ss_dssp             CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE----cCCCcEEEEeCCcccccccCCc
Confidence            99997766554   2458888999999999999999999999999999999999    8888999999999986432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       177 ~~~~~~gt~~y~aPE~~~~  195 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAY  195 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             ccccccCCccccChhhhcC
Confidence            4456799999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.98  E-value=5.7e-34  Score=244.09  Aligned_cols=160  Identities=26%  Similarity=0.376  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||||++......    ......+.+|+.+++.++||||+  .+++++...    +...+|+||
T Consensus        73 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv--~l~~~~~~~~~~~~~~~~~lv~  146 (464)
T 3ttj_A           73 GAQGIVCAAYDAVLDRNVAIKKLSRPFQN----QTHAKRAYRELVLMKCVNHKNII--SLLNVFTPQKTLEEFQDVYLVM  146 (464)
T ss_dssp             CSSCEEEEEEETTTTEEEEEEEEESGGGS----HHHHHHHHHHHHHHHHCCCTTBC--CCSEEECSCCSTTTCCEEEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEECccccC----hHHHHHHHHHHHHHHhCCCCCCC--cEEEEEccCCccccCCeEEEEE
Confidence            99999999999999999999998754211    12234668999999999999998  445444322    224569999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++..+..      .+++..+..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+|+....
T Consensus       147 E~~~~~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          147 ELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             ECCSEEHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCCC-----
T ss_pred             eCCCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE----eCCCCEEEEEEEeeeecCC
Confidence            9999886555432      37888889999999999999999999999999999999    8888999999999987765


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....+||+.|+|||++.+
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~  237 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILG  237 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTT
T ss_pred             CcccCCCcccccccCHHHHcC
Confidence            4 3456899999999999876

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.98  E-value=4.7e-34  Score=236.00  Aligned_cols=162  Identities=20%  Similarity=0.231  Sum_probs=132.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||+|++++....   .....+.+.+|+.+++.+ +||||+.  +++++.  +....|+||||+
T Consensus        20 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~E~~~l~~~~~hp~iv~--l~~~~~--~~~~~~lv~e~~   92 (345)
T 3a8x_A           20 GSYAKVLLVRLKKTDRIYAMKVVKKELVN---DDEDIDWVQTEKHVFEQASNHPFLVG--LHSCFQ--TESRLFFVIEYV   92 (345)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEEGGGSC---SHHHHHHHHHHHHHHHHTTTCTTBCC--EEEEEE--CSSEEEEEECCC
T ss_pred             cCCeEEEEEEECCCCCEEEEEEEEhHHhc---chHHHHHHHHHHHHHHhcCCCCccCe--EEEEEE--eCCEEEEEEeCC
Confidence            99999999999999999999998764221   112234567899999887 8999984  444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....  .
T Consensus        93 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           93 NGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL----DSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCGGGCBCSCCTTC
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEEeccccccccCCCC
Confidence            99997666544   2458888999999999999999999999999999999999    8888999999999986432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       166 ~~~~~~gt~~y~aPE~~~~  184 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRG  184 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccccCCCccccCccccCC
Confidence            4456799999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.98  E-value=7.7e-34  Score=238.77  Aligned_cols=176  Identities=20%  Similarity=0.220  Sum_probs=140.6

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV  121 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~  121 (229)
                      .+|.+...   |+||.||+|++..+|+.||+|+++....     ....+.+.+|+++++.++||||+  .+++++...+.
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~~~~~   81 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-----LRPVDVQMREFEVLKKLNHKNIV--KLFAIEEETTT   81 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-----GSCHHHHHHHHHHHHHCCCTTBC--CEEEEEECTTT
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-----cchHHHHHHHHHHHHhcCCCCCC--eEEEeeccCCC
Confidence            34444333   9999999999999999999999875321     22344567899999999999998  45555544444


Q ss_pred             cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      ...++||||+++++|..++........+++.+++.++.|++.||+|||++||+||||||+|||+....+..+.+||+|||
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            46799999999999877766543333488889999999999999999999999999999999986655667789999999


Q ss_pred             cceecCcc-cccceeecccCCCCcccc
Q psy11822        202 SASHVSKA-VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       202 ~a~~~~~~-~~~~~~gt~~y~aPE~l~  227 (229)
                      +++..... ......||+.|+|||++.
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDMYE  188 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHHHH
T ss_pred             CceEccCCCccccccCCccccCHHHhh
Confidence            99887654 334678999999999874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.98  E-value=8.6e-34  Score=233.33  Aligned_cols=165  Identities=15%  Similarity=0.109  Sum_probs=122.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHH--HHHhhhhhhhhcccccccccc--------------------------C
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDL--LKRMLTMDQVERRITPGEALN--------------------------H  104 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~--------------------------h  104 (229)
                      |+||.||+|++  +|+.||||+++......  .......+.+.+|+.+++.++                          |
T Consensus        31 G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~h  108 (336)
T 2vuw_A           31 GVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYP  108 (336)
T ss_dssp             ETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCC
T ss_pred             cCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCc
Confidence            99999999998  68999999987531100  000112245677888887775                          5


Q ss_pred             ccccceehhhhhhcc-----------cccccceeeeeeeCCC-CCccCCCCCCCCccccCCccchHHHHHHHHHHHH-HC
Q psy11822        105 AFVTLAHLVDYAHCN-----------NVKASVQMMEVTRRSQ-YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK-QL  171 (229)
Q Consensus       105 ~ni~~~~~~~~~~~~-----------~~~~~~lv~e~~~~~~-l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH-~~  171 (229)
                      |||+  .+++++...           .....|+||||+++|+ +..+..     ..+++.+++.++.||+.||.||| ++
T Consensus       109 p~iv--~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~  181 (336)
T 2vuw_A          109 PLLL--KAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTASLAVAEASL  181 (336)
T ss_dssp             HHHH--HHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH--HHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            5554  344444320           1456899999999996 555533     35788899999999999999999 99


Q ss_pred             CCccccCCCCCeeeeCCCC----------------CCccEEEeecCcceecCcccccceeecccCCCCccccCC
Q psy11822        172 GLIHADLKPENIMLVDPVR----------------QPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~----------------~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ||+||||||+|||+.....                ....+||+|||+|+.....   ..+||+.|+|||++.|+
T Consensus       182 ~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~g~  252 (336)
T 2vuw_A          182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFTGD  252 (336)
T ss_dssp             CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGCCC
T ss_pred             CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhcCC
Confidence            9999999999999944311                1238999999999877653   46899999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.98  E-value=8.6e-34  Score=235.86  Aligned_cols=164  Identities=19%  Similarity=0.263  Sum_probs=132.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++......    ....+.+.+|+.+++.++||||+  .+++++.  +....|+||||++
T Consensus        40 G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv--~~~~~~~--~~~~~~lv~e~~~  111 (362)
T 2bdw_A           40 GAFSVVRRCVHKTTGLEFAAKIINTKKLS----ARDFQKLEREARICRKLQHPNIV--RLHDSIQ--EESFHYLVFDLVT  111 (362)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEETTTCC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--eCCEEEEEEecCC
Confidence            89999999999999999999998753221    11234678999999999999998  4454444  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++...+..   ...+++.++..++.||+.||.|||++||+||||||+|||+... ...+.+||+|||++...... ..
T Consensus       112 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~DfG~a~~~~~~~~~  187 (362)
T 2bdw_A          112 GGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAW  187 (362)
T ss_dssp             SCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCS-STTCCEEECCCTTCBCCTTCCSC
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEeecCcceEecCCccc
Confidence            9997555544   2458888999999999999999999999999999999999433 23457999999999877654 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       188 ~~~~gt~~y~aPE~~~~  204 (362)
T 2bdw_A          188 HGFAGTPGYLSPEVLKK  204 (362)
T ss_dssp             CCSCSCTTTCCHHHHTT
T ss_pred             ccCCCCccccCHHHHcc
Confidence            46789999999999865

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.98  E-value=3.8e-34  Score=234.74  Aligned_cols=169  Identities=24%  Similarity=0.303  Sum_probs=133.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.............+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        22 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~   97 (326)
T 2y0a_A           22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI--TLHEVYE--NKTDVILILELVA   97 (326)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCC--cEEEEEE--eCCEEEEEEEcCC
Confidence            99999999999999999999998753211000111245678999999999999997  4444443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+.........+||+|||+++..... ..
T Consensus        98 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~  174 (326)
T 2y0a_A           98 GGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF  174 (326)
T ss_dssp             SCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC
T ss_pred             CCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc
Confidence            9998777655   3468999999999999999999999999999999999999433222338999999999887543 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       175 ~~~~gt~~y~aPE~~~~  191 (326)
T 2y0a_A          175 KNIFGTPEFVAPEIVNY  191 (326)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             ccccCCcCcCCceeecC
Confidence            56789999999999865

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.98  E-value=9.7e-34  Score=239.07  Aligned_cols=162  Identities=17%  Similarity=0.160  Sum_probs=133.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++++....   .....+.+.+|+.++..++||||+.  ++..+.  +...+|+||||++
T Consensus        72 G~fG~V~~~~~~~~~~~vAiK~l~k~~~~---~~~~~~~~~~E~~il~~~~hp~Iv~--l~~~~~--~~~~~~lVmE~~~  144 (412)
T 2vd5_A           72 GAFSEVAVVKMKQTGQVYAMKIMNKWDML---KRGEVSCFREERDVLVNGDRRWITQ--LHFAFQ--DENYLYLVMEYYV  144 (412)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HHGGGCCHHHHHHHHHHSCTTTBCC--EEEEEE--CSSEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEeHHHhh---hHHHHHHHHHHHHHHHhcCCCCeee--EEEEEe--eCCEEEEEEcCCC
Confidence            99999999999999999999999874322   2234456788999999999999984  443433  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++...  ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus       145 gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl----d~~g~vkL~DFGla~~~~~~~~~  218 (412)
T 2vd5_A          145 GGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL----DRCGHIRLADFGSCLKLRADGTV  218 (412)
T ss_dssp             SCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCTTSCE
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee----cCCCCEEEeechhheeccCCCcc
Confidence            99977765431  1258888899999999999999999999999999999999    88889999999999887543   


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      .....+||+.|+|||++.
T Consensus       219 ~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          219 RSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             ECSSCCSCGGGCCHHHHH
T ss_pred             ccceeccccCcCCHHHHh
Confidence            223568999999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.5e-33  Score=230.83  Aligned_cols=161  Identities=20%  Similarity=0.199  Sum_probs=131.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|.+....       .....+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        16 G~~g~Vy~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~--~~~~~~lv~e~~~   84 (321)
T 1tki_A           16 GEFGIVHRCVETSSKKTYMAKFVKVKG-------TDQVLVKKEISILNIARHRNIL--HLHESFE--SMEELVMIFEFIS   84 (321)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECCCT-------HHHHHHHHHHHHHHHSCCTTBC--CEEEEEE--ETTEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEecCc-------ccHHHHHHHHHHHHhCCCCCCC--eEeEEEe--cCCEEEEEEEeCC
Confidence            999999999999999999999886431       1223568899999999999997  4555544  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|...+...  ...+++.++..++.|++.||.|||++||+||||||+|||+...  .++.+||+|||++...... ..
T Consensus        85 g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~--~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           85 GLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR--RSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS--SCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC--CCCCEEEEECCCCeECCCCCcc
Confidence            99976665441  2358888999999999999999999999999999999999321  1679999999999887554 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~  177 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             EEEESCGGGSCHHHHTT
T ss_pred             ccccCChhhcCcHHhcC
Confidence            56789999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.98  E-value=4e-34  Score=230.81  Aligned_cols=161  Identities=22%  Similarity=0.252  Sum_probs=131.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++....    .......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        13 G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   84 (292)
T 3o0g_A           13 GTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLKELKHKNIV--RLHDVLH--SDKKLTLVFEFCD   84 (292)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEESSCS----STTHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCeEEEEEEECCCCceEEEEeeeccCC----cCCcchHHHHHHHHHhcCCCCCEe--eEEeEEE--eCCEEEEEEecCC
Confidence            9999999999999999999999865321    112234568899999999999998  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....  .
T Consensus        85 ~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  157 (292)
T 3o0g_A           85 QDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECCSCCSC
T ss_pred             CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEeecccceecCCcccc
Confidence            8776555443   2458888999999999999999999999999999999999    88889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       158 ~~~~~~t~~y~aPE~~~~  175 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTT
T ss_pred             ccCCccccCCcChHHHcC
Confidence            356788999999999865

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.98  E-value=1.3e-33  Score=235.51  Aligned_cols=162  Identities=17%  Similarity=0.194  Sum_probs=123.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccc-cccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITP-GEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||+|++++.....   ......+.+|..+ ++.++||||+.  +++.+.  +...+|+||||+
T Consensus        49 G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~---~~~~~~~~~e~~~ll~~~~hp~Iv~--l~~~~~--~~~~~~lv~E~~  121 (373)
T 2r5t_A           49 GSFGKVLLARHKAEEVFYAVKVLQKKAILK---KKEEKHIMSERNVLLKNVKHPFLVG--LHFSFQ--TADKLYFVLDYI  121 (373)
T ss_dssp             CTTCEEEEEEETTTCCEEEEEEEEGGGBC----------------CCBCCCCCTTBCC--EEEEEE--CSSEEEEEEECC
T ss_pred             CCCeEEEEEEEcCCCCEEEEEEEEHHHhhh---hHHHHHHHHHHHHHHHhCCCCCCCC--EEEEEE--eCCEEEEEEeCC
Confidence            999999999999999999999987642211   1122345667666 57789999984  444443  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....  .
T Consensus       122 ~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll----~~~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          122 NGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL----DSQGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCBCGGGBCCCC
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----CCCCCEEEeeCccccccccCCC
Confidence            99997666544   3458888889999999999999999999999999999999    8888999999999986432  2


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       195 ~~~~~~gt~~y~aPE~~~~  213 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHK  213 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTT
T ss_pred             ccccccCCccccCHHHhCC
Confidence            4456799999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=8.5e-34  Score=242.64  Aligned_cols=169  Identities=26%  Similarity=0.362  Sum_probs=121.6

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc---
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC---  118 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~---  118 (229)
                      .+|.+...   |+||.||+|.+..+++.||||++......    ....+++.+|+.+|+.++||||+.  +++++..   
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~--l~~~~~~~~~  126 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED----LIDCKRILREIAILNRLNHDHVVK--VLDIVIPKDV  126 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSS----HHHHHHHHHHHHHHHHCCCTTBCC--EEEECCCSCT
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC----HHHHHHHHHHHHHHHhCCCCCCCc--eEEEEecCCc
Confidence            34444333   89999999999999999999988653211    122346789999999999999984  4444422   


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                      .....+|+||||+++. +..++..   ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+
T Consensus       127 ~~~~~~~lv~e~~~~~-L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl----~~~~~~kl~  198 (458)
T 3rp9_A          127 EKFDELYVVLEIADSD-FKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV----NQDCSVKVC  198 (458)
T ss_dssp             TTCCCEEEEECCCSEE-HHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTCCEEEC
T ss_pred             ccCceEEEEEeccccc-hhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE----CCCCCEeec
Confidence            2234679999998754 4333333   2458888999999999999999999999999999999999    888899999


Q ss_pred             ecCcceecCcc-----------------------------cccceeecccCCCCcccc
Q psy11822        199 DFGSASHVSKA-----------------------------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       199 DFg~a~~~~~~-----------------------------~~~~~~gt~~y~aPE~l~  227 (229)
                      |||+|+.....                             .....+||++|+|||++.
T Consensus       199 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  256 (458)
T 3rp9_A          199 DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL  256 (458)
T ss_dssp             CCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred             ccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence            99999876421                             224568899999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.98  E-value=2.8e-34  Score=232.27  Aligned_cols=162  Identities=22%  Similarity=0.278  Sum_probs=127.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++......   .....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~e~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~   94 (294)
T 4eqm_A           22 GGMSTVYLAEDTILNIKVAIKAIFIPPRE---KEETLKRFEREVHNSSQLSHQNIV--SMIDVDE--EDDCYYLVMEYIE   94 (294)
T ss_dssp             ETTEEEEEEEETTTCSEEEEEEEECCSSC---CHHHHHHHHHHHHHHTTCCBTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCCeEEEEEeccCccc---cHHHHHHHHHHHHHHhcCCCCCCc--eEEEeee--eCCeEEEEEeCCC
Confidence            89999999999999999999987432111   122344678999999999999997  4555543  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +++|..++..   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.....   
T Consensus        95 g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           95 GPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI----DSNKTLKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             SCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCSSSTTC------
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCCEEEEeCCCcccccccccc
Confidence            9998777654   3458888999999999999999999999999999999999    78889999999999876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       168 ~~~~~~gt~~y~aPE~~~~  186 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKG  186 (294)
T ss_dssp             -------CCSSCCHHHHHT
T ss_pred             ccCccccCccccCHhHhcC
Confidence            2345689999999999865

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.98  E-value=1.3e-33  Score=231.35  Aligned_cols=160  Identities=20%  Similarity=0.277  Sum_probs=130.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++.....     ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        18 G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~--~~~~~~lv~e~~~   88 (323)
T 3tki_A           18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-----VDCPENIKKEICINKMLNHENVV--KFYGHRR--EGNIQYLFLEYCS   88 (323)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECC------------CHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEEcccc-----cchHHHHHHHHHHHHhCCCCCCC--eEEEEEe--cCCeEEEEEEcCC
Confidence            8999999999999999999999865322     11234568899999999999997  4554443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......   
T Consensus        89 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           89 GGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             TEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             CCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE----eCCCCEEEEEeeccceeccCCcc
Confidence            9998777665   3468899999999999999999999999999999999999    78889999999999876432   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|+|||++.+
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~  181 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKR  181 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHC
T ss_pred             cccCCCccCcCccCcHHhcc
Confidence             2346789999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.98  E-value=3.1e-33  Score=242.81  Aligned_cols=166  Identities=19%  Similarity=0.190  Sum_probs=135.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++..+|+.||+|++.+....   .......+.+|+.+++.++||||+.  ++.++.  +...+|+||||+
T Consensus       195 ~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~---~~~~~~~~~~E~~iL~~l~hp~Iv~--l~~~~~--~~~~l~lVmE~~  267 (543)
T 3c4z_A          195 RGGFGEVFACQMKATGKLYACKKLNKKRLK---KRKGYQGAMVEKKILAKVHSRFIVS--LAYAFE--TKTDLCLVMTIM  267 (543)
T ss_dssp             ECSSSEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHHCCCTTBCC--EEEEEE--CSSEEEEEECCC
T ss_pred             eCCCeEEEEEEECCCCcEEEEEEEEhHHhh---hhHHHHHHHHHHHHHHhcCCCCEee--EEEEEe--eCCEEEEEEEec
Confidence            399999999999999999999999875432   2334456789999999999999984  443433  345689999999


Q ss_pred             eCCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++|+|..++.... ....+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++..... 
T Consensus       268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl----~~~g~vkL~DFGla~~~~~~~  343 (543)
T 3c4z_A          268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAGQ  343 (543)
T ss_dssp             TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTTC
T ss_pred             cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE----eCCCCEEEeecceeeeccCCC
Confidence            9999765544321 13358888899999999999999999999999999999999    88889999999999987554 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|+|||++.+
T Consensus       344 ~~~~~~~GT~~Y~APE~l~~  363 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLLG  363 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHTT
T ss_pred             cccccccCCccccChhhhcC
Confidence             2345699999999999876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.98  E-value=1.1e-33  Score=240.99  Aligned_cols=164  Identities=20%  Similarity=0.266  Sum_probs=130.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++.......    ...+.+.+|+.+++.++||||+  .+++++.  +....|+||||++
T Consensus        22 G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~----~~~~~~~~E~~il~~l~hpnIv--~l~~~~~--~~~~~~lv~E~~~   93 (444)
T 3soa_A           22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSA----RDHQKLEREARICRLLKHPNIV--RLHDSIS--EEGHHYLIFDLVT   93 (444)
T ss_dssp             C--CEEEEEEETTTTEEEEEEEEESCSCHH----HHHHHHHHHHHHHHHCCBTTBC--CEEEEEE--CSSEEEEEECCCB
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEEcccCCH----HHHHHHHHHHHHHHhCCCcCCC--eEEEEEE--ECCEEEEEEEeCC
Confidence            999999999999999999999986532221    1233568999999999999998  4555544  4456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... ..++.+||+|||+|......  .
T Consensus        94 gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~-~~~~~vkL~DFG~a~~~~~~~~~  169 (444)
T 3soa_A           94 GGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQA  169 (444)
T ss_dssp             CCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS-STTCCEEECCCSSCBCCCTTCCB
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc-CCCCcEEEccCceeEEecCCCce
Confidence            9997555443   2458889999999999999999999999999999999999433 24578999999999877553  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+||+.|+|||++.+
T Consensus       170 ~~~~~gt~~Y~APE~l~~  187 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRK  187 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTT
T ss_pred             eecccCCcccCCHHHhcC
Confidence            346789999999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.98  E-value=3.2e-33  Score=236.67  Aligned_cols=166  Identities=21%  Similarity=0.292  Sum_probs=124.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHH--HHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFID--LLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+++.||+|++......  ..........+.+|+.++++++||||+  .+++++.   ....++||||
T Consensus       146 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv--~l~~~~~---~~~~~lv~e~  220 (419)
T 3i6u_A          146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII--KIKNFFD---AEDYYIVLEL  220 (419)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBC--CCCEEEE---SSEEEEEEEC
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEe--eEEEEEe---cCceEEEEEc
Confidence            99999999999999999999998753211  011122233568999999999999998  4455443   2346899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++|...+..   ...+++.++..++.|++.||+|||++||+||||||+|||+... +..+.+||+|||+|+..... 
T Consensus       221 ~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kl~DFG~a~~~~~~~  296 (419)
T 3i6u_A          221 MEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETS  296 (419)
T ss_dssp             CTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-SSSCCEEECCSSTTTSCC---
T ss_pred             CCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC-CCcceEEEeecccceecCCCc
Confidence            999998766655   3468889999999999999999999999999999999999443 33457999999999887554 


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      .....+||+.|+|||++.
T Consensus       297 ~~~~~~gt~~y~aPE~~~  314 (419)
T 3i6u_A          297 LMRTLCGTPTYLAPEVLV  314 (419)
T ss_dssp             --------CTTCCTTTTC
T ss_pred             cccccCCCCCccCceeee
Confidence            345678999999999985

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.7e-33  Score=229.03  Aligned_cols=160  Identities=22%  Similarity=0.226  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|.+....      ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        21 G~~g~V~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~   90 (310)
T 3s95_A           21 GCFGQAIKVTHRETGEVMVMKELIRFD------EETQRTFLKEVKVMRCLEHPNVL--KFIGVLY--KDKRLNFITEYIK   90 (310)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEESCCC------HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeccCC------HHHHHHHHHHHHHHHhCCCcCcc--cEEEEEe--cCCeeEEEEEecC
Confidence            999999999999999999999875421      12234678999999999999997  4555544  3355799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      +++|..++...  ...+++.++..++.|++.||+|||++||+||||||+||++    +.++.+||+|||+++....... 
T Consensus        91 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           91 GGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV----RENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             TCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE----CCCCCEEEeecccceeccccccc
Confidence            99977765432  2358888899999999999999999999999999999999    8888999999999987744311 


Q ss_pred             ---------------cceeecccCCCCccccC
Q psy11822        212 ---------------NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ---------------~~~~gt~~y~aPE~l~~  228 (229)
                                     ....||+.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMING  196 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTT
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcC
Confidence                           15689999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=1.1e-33  Score=241.35  Aligned_cols=162  Identities=21%  Similarity=0.211  Sum_probs=124.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|+++......   ......+.+|+.+++.++||||+.  +++++.  ....+++||||++
T Consensus       159 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~--l~~~~~--~~~~~~lv~e~~~  231 (446)
T 4ejn_A          159 GTFGKVILVKEKATGRYYAMKILKKEVIVA---KDEVAHTLTENRVLQNSRHPFLTA--LKYSFQ--THDRLCFVMEYAN  231 (446)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------CCCCCSCTTSCC--EEEEEE--ETTEEEEEECCCS
T ss_pred             CcCEEEEEEEEcCCCCEEEEEEEEhhhhhh---hHHHHHHHHHHHHHHhCCCCeEee--EEEEEe--eCCEEEEEEeeCC
Confidence            999999999999999999999998753221   223345688999999999999974  444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++|...+..   ...+++..+..++.|++.||+|||+ +||+||||||+|||+    +.++.+||+|||+|+.....  
T Consensus       232 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  304 (446)
T 4ejn_A          232 GGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML----DKDGHIKITDFGLCKEGIKDGA  304 (446)
T ss_dssp             SCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE----CSSSCEEECCCCCCCTTCC---
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE----CCCCCEEEccCCCceeccCCCc
Confidence            9997666544   3458888899999999999999998 999999999999999    88889999999999865332  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       305 ~~~~~~gt~~y~aPE~~~~  323 (446)
T 4ejn_A          305 TMKTFCGTPEYLAPEVLED  323 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHT
T ss_pred             ccccccCCccccCHhhcCC
Confidence            3456789999999999865

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=9.9e-34  Score=235.43  Aligned_cols=158  Identities=22%  Similarity=0.240  Sum_probs=121.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++...       ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        31 G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~   99 (361)
T 3uc3_A           31 GNFGVARLMRDKLTKELVAVKYIERG-------AAIDENVQREIINHRSLRHPNIV--RFKEVIL--TPTHLAIIMEYAS   99 (361)
T ss_dssp             STTSSEEEEEETTTCCEEEEEEEESS-------TTSCHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEecC-------ccccHHHHHHHHHHHhCCCCCCC--cEEEEEe--eCCEEEEEEEeCC
Confidence            99999999999999999999998653       12234568999999999999998  4454443  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc--cEEEeecCcceecCcc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY--RVKVIDFGSASHVSKA-  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~--~~kl~DFg~a~~~~~~-  209 (229)
                      +++|...+..   .+.+++.++..++.|++.||+|||++||+||||||+|||+    +..+  .+||+|||+|+..... 
T Consensus       100 ~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill----~~~~~~~~kl~Dfg~a~~~~~~~  172 (361)
T 3uc3_A          100 GGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL----DGSPAPRLKICDFGYSKSSVLHS  172 (361)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEE----CSSSSCCEEECCCCCC-------
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCceEEEeecCccccccccC
Confidence            9997666543   3458889999999999999999999999999999999999    5444  5999999999854332 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       173 ~~~~~~gt~~y~aPE~~~~  191 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLR  191 (361)
T ss_dssp             --------CTTSCHHHHHC
T ss_pred             CCCCCcCCCCcCChhhhcC
Confidence            3356789999999999865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=2.8e-33  Score=244.01  Aligned_cols=164  Identities=20%  Similarity=0.177  Sum_probs=135.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++.+....   .......+.+|+.+++.++||||+.  +++.+.  +....|+||||++
T Consensus       195 G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~---~~~~~~~~~~E~~iL~~l~hp~Iv~--l~~~~~--~~~~l~lVmEy~~  267 (576)
T 2acx_A          195 GGFGEVCACQVRATGKMYACKKLEKKRIK---KRKGEAMALNEKQILEKVNSRFVVS--LAYAYE--TKDALCLVLTLMN  267 (576)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHHCCCTTBCC--EEEEEE--CSSEEEEEECCCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEhHhhh---hhHHHHHHHHHHHHHHHcCCCCEee--EEEEEe--eCCEEEEEEEcCC
Confidence            99999999999999999999999875332   2334456789999999999999984  444433  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|..++.... ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+..... ..
T Consensus       268 gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl----d~~g~vKL~DFGla~~~~~~~~~  342 (576)
T 2acx_A          268 GGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEGQTI  342 (576)
T ss_dssp             SCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEECCTTCCE
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE----eCCCCeEEEecccceecccCccc
Confidence            999766554422 2348888999999999999999999999999999999999    88889999999999887654 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       343 ~~~~GT~~Y~APEvl~~  359 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKN  359 (576)
T ss_dssp             ECCCSCGGGCCHHHHTT
T ss_pred             cccCCCccccCHHHHcC
Confidence            56799999999999876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=7.3e-34  Score=231.39  Aligned_cols=164  Identities=24%  Similarity=0.295  Sum_probs=124.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc--ccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN--VKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~--~~~~~lv~e~  130 (229)
                      |+||.||+|++..+++.||+|+++.....   .......+.+|+.+++.++||||+  .+++++....  ....|+||||
T Consensus        23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~~~~~~~~~~~lv~e~   97 (311)
T 3ork_A           23 GGMSEVHLARDLRDHRDVAVKVLRADLAR---DPSFYLRFRREAQNAAALNHPAIV--AVYDTGEAETPAGPLPYIVMEY   97 (311)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECTTTTT---SHHHHHHHHHHHTTCCCCCCTTBC--CEEEEEEEEETTEEEEEEEEEC
T ss_pred             CCCEEEEEEEECCCCceEEEEEeCccccC---CHHHHHHHHHHHHHHHcCCCCCcc--eEEEeeeccCCCCcccEEEEec
Confidence            99999999999999999999998753211   112334678999999999999998  4444443222  1234899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++|..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++..... 
T Consensus        98 ~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           98 VDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             CCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----ETTSCEEECCCSCC-------
T ss_pred             CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE----cCCCCEEEeeccCcccccccc
Confidence            999998777654   3458888899999999999999999999999999999999    77789999999999876442 


Q ss_pred             ----cccceeecccCCCCccccC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~  228 (229)
                          ......||+.|+|||++.+
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~  193 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARG  193 (311)
T ss_dssp             -----------CCTTCCHHHHHT
T ss_pred             cccccccccCcCcccCCHHHhcC
Confidence                2234679999999999865

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.3e-33  Score=236.61  Aligned_cols=161  Identities=27%  Similarity=0.426  Sum_probs=121.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+|+.||+|++......    ......+.+|+.+++.+. ||||+  .+++++...+...+|+||||+
T Consensus        20 G~~g~V~~~~~~~~~~~vaiK~i~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv--~l~~~~~~~~~~~~~lv~e~~   93 (388)
T 3oz6_A           20 GAYGIVWKSIDRRTGEVVAVKKIFDAFQN----STDAQRTFREIMILTELSGHENIV--NLLNVLRADNDRDVYLVFDYM   93 (388)
T ss_dssp             ----CEEEEEETTTCCEEEEEEECC--CC----HHHHHHHHHHHHHHHHTTTCTTBC--CEEEEEECTTSSCEEEEEECC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEecccccC----hHHHHHHHHHHHHHHhccCCCCCC--eeeeEEecCCCCEEEEEeccc
Confidence            89999999999999999999988643211    112335578999999996 99997  455555444445689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc---
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK---  208 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~---  208 (229)
                      ++ ++..++..    ..+++..+..++.|++.||+|||+.||+||||||+|||+    +.++.+||+|||+|+....   
T Consensus        94 ~~-~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           94 ET-DLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL----NAECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             SE-EHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEESSSCCC
T ss_pred             Cc-CHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE----cCCCCEEecCCccccccccccc
Confidence            96 44444332    357888888999999999999999999999999999999    8888999999999987632   


Q ss_pred             --------------------ccccceeecccCCCCccccC
Q psy11822        209 --------------------AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 --------------------~~~~~~~gt~~y~aPE~l~~  228 (229)
                                          ......+||++|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence                                12244689999999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=1.5e-33  Score=239.46  Aligned_cols=161  Identities=26%  Similarity=0.363  Sum_probs=126.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc---ccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN---VKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~---~~~~~lv~e  129 (229)
                      |+||.||+|++..+++.||||+++.....    ....+.+.+|+.+++.++||||+.  +++++....   ...+|+|||
T Consensus        37 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~--l~~~~~~~~~~~~~~~~lv~e  110 (432)
T 3n9x_A           37 GSYGYVYLAYDKNTEKNVAIKKVNRMFED----LIDCKRILREITILNRLKSDYIIR--LYDLIIPDDLLKFDELYIVLE  110 (432)
T ss_dssp             ETTEEEEEEEETTTTEEEEEEEECSTTTS----HHHHHHHHHHHHHHHHCCCTTBCC--EEEECCCSCTTTCCCEEEEEE
T ss_pred             cCCEEEEEEEECCCCcEEEEEEeCchhcC----hHHHHHHHHHHHHHHHcCCCCcce--EEEEEecCCCCcCCeEEEEEe
Confidence            89999999999999999999998653211    122346789999999999999984  444443221   145799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++ +|..++..   ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+|+.....
T Consensus       111 ~~~~-~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl----~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          111 IADS-DLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL----NQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             CCSE-EHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEEC---
T ss_pred             cCCc-CHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE----CCCCCEEEccCCCccccccc
Confidence            9886 54444443   3458889999999999999999999999999999999999    88889999999999877432


Q ss_pred             ------------------------cccceeecccCCCCcccc
Q psy11822        210 ------------------------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ------------------------~~~~~~gt~~y~aPE~l~  227 (229)
                                              .....+||++|+|||++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  224 (432)
T 3n9x_A          183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL  224 (432)
T ss_dssp             ----------------------------CCCCCTTCCHHHHT
T ss_pred             ccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence                                    125678999999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=1.9e-34  Score=252.31  Aligned_cols=163  Identities=15%  Similarity=0.105  Sum_probs=122.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHH----HHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREF----IDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~----~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |..|.+..++....|+.||+|++.+..    ..........+++.+|+++|+++ .|+||+  .++++++  +....|||
T Consensus       245 ~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~--~~~~~~e--d~~~~yLV  320 (569)
T 4azs_A          245 GAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAP--AVLAHGE--NAQSGWLV  320 (569)
T ss_dssp             -------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCC--CEEEEEE--CSSEEEEE
T ss_pred             CCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCee--EEEEEEE--ECCEEEEE
Confidence            445666666666679999999976421    11122344556789999999999 799997  5677765  44568999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||++|++|.+.+..   .+.++   ...|+.||++||+|||++|||||||||+|||+    +.++.+||+|||+|+...
T Consensus       321 MEyv~G~~L~d~i~~---~~~l~---~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL----~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA---GEEID---REKILGSLLRSLAALEKQGFWHDDVRPWNVMV----DARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             EECCCSEEHHHHHHT---TCCCC---HHHHHHHHHHHHHHHHHTTCEESCCCGGGEEE----CTTSCEEECCCTTEESCC
T ss_pred             EecCCCCcHHHHHHh---CCCCC---HHHHHHHHHHHHHHHHHCCceeccCchHhEEE----CCCCCEEEeecccCeeCC
Confidence            999999998888776   23344   34699999999999999999999999999999    888899999999998775


Q ss_pred             cc--cccceeecccCCCCccccCC
Q psy11822        208 KA--VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ..  ...+.+||+.|||||++.|+
T Consensus       391 ~~~~~~~t~vGTp~YmAPE~l~g~  414 (569)
T 4azs_A          391 QDCSWPTNLVQSFFVFVNELFAEN  414 (569)
T ss_dssp             ---CCSHHHHHHHHHHHHHHC---
T ss_pred             CCCccccCceechhhccHHHhCCC
Confidence            43  34567999999999999763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=2.5e-33  Score=241.41  Aligned_cols=164  Identities=20%  Similarity=0.293  Sum_probs=132.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++.....    .......+.+|+.+++.++||||+  .+++++.  +....++||||+.
T Consensus        33 G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~  104 (486)
T 3mwu_A           33 GSFGEVLKCKDRITQQEYAVKVINKASA----KNKDTSTILREVELLKKLDHPNIM--KLFEILE--DSSSFYIVGELYT  104 (486)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEEHHHH----BCSCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             cCCEEEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHHHhCCCCCcC--eEEEEEE--cCCEEEEEEEcCC
Confidence            9999999999999999999999876432    122345678999999999999997  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +..+.+||+|||+|+..... ..
T Consensus       105 ~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          105 GGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS-STTCCEEECSCSCTTTBCCC---
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-CCCCCEEEEECCcCeECCCCCcc
Confidence            9996554433   2458888999999999999999999999999999999999543 34568999999999876543 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       181 ~~~~gt~~y~aPE~~~~  197 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRG  197 (486)
T ss_dssp             -CCTTGGGGCCGGGGGS
T ss_pred             CCCcCCCCCCCHHHhCC
Confidence            56789999999999876

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=1.6e-33  Score=233.22  Aligned_cols=170  Identities=19%  Similarity=0.214  Sum_probs=131.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++...... ......+.+.+|+.+++.++||||+  .+++++.  +....|+||||++
T Consensus        35 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~--~~~~~~lv~e~~~  109 (351)
T 3c0i_A           35 GPFSVVRRCINRETGQQFAVKIVDVAKFTS-SPGLSTEDLKREASICHMLKHPHIV--ELLETYS--SDGMLYMVFEFMD  109 (351)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHHT-SSSCCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEhhhccc-cccchHHHHHHHHHHHHhCCCCCCC--cEEEEEE--eCCEEEEEEeCCC
Confidence            999999999999999999999987643221 0011345678999999999999998  4555444  3456799999999


Q ss_pred             CCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        133 RSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       133 ~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++|...+.. ......+++..+..++.||+.||.|||++||+||||||+|||+... .....+||+|||++......  
T Consensus       110 g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~-~~~~~vkl~Dfg~a~~~~~~~~  188 (351)
T 3c0i_A          110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK-ENSAPVKLGGFGVAIQLGESGL  188 (351)
T ss_dssp             SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSS-STTCCEEECCCTTCEECCTTSC
T ss_pred             CCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecC-CCCCcEEEecCcceeEecCCCe
Confidence            9997544322 1112347888889999999999999999999999999999999443 22346999999999887654  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       189 ~~~~~~gt~~y~aPE~~~~  207 (351)
T 3c0i_A          189 VAGGRVGTPHFMAPEVVKR  207 (351)
T ss_dssp             BCCCCCSCGGGCCHHHHTT
T ss_pred             eecCCcCCcCccCHHHHcC
Confidence            2345789999999999865

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=4.4e-33  Score=226.95  Aligned_cols=160  Identities=23%  Similarity=0.299  Sum_probs=125.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++. +|+.||+|++......    ......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        32 G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~  102 (311)
T 3niz_A           32 GTYGVVYKAKDS-QGRIVALKRIRLDAED----EGIPSTAIREISLLKELHHPNIV--SLIDVIH--SERCLTLVFEFME  102 (311)
T ss_dssp             CSSCEEEEEEET-TSCEEEEEEEC----------CHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--CSSCEEEEEECCS
T ss_pred             CCCeEEEEEEEC-CCCEEEEEEEeccccc----chhhHHHHHHHHHHHHcCCCCEe--eeeeEEc--cCCEEEEEEcCCC
Confidence            999999999985 5999999998764221    22334668999999999999998  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++.+..+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....  .
T Consensus       103 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A          103 KDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             EEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEETTSCCC-
T ss_pred             CCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE----CCCCCEEEccCcCceecCCCccc
Confidence            7655444433   2358888899999999999999999999999999999999    78889999999999887543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       176 ~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             --CCCCCCTTCCHHHHTT
T ss_pred             ccCCcccCCcCCHHHhcC
Confidence            345688999999999865

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=5.6e-33  Score=227.31  Aligned_cols=160  Identities=23%  Similarity=0.233  Sum_probs=133.0

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||.||+|++..+|+.||||++....      ....+.+.+|+.+++.++||||+.  +++++.  .....++||||
T Consensus        54 g~G~~g~V~~a~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~--~~~~~~--~~~~~~lv~e~  123 (321)
T 2c30_A           54 GEGSTGIVCLAREKHSGRQVAVKMMDLRK------QQRRELLFNEVVIMRDYQHFNVVE--MYKSYL--VGEELWVLMEF  123 (321)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEETTT------CCSHHHHHHHHHHHTTCCCTTBCC--EEEEEE--ETTEEEEEECC
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEeccc------hhHHHHHHHHHHHHHhCCCCCcce--EEEEEE--ECCEEEEEEec
Confidence            33999999999998899999999986531      223446789999999999999974  444443  23457999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++..+...    ..+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++...... 
T Consensus       124 ~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~~  195 (321)
T 2c30_A          124 LQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----TLDGRVKLSDFGFCAQISKDV  195 (321)
T ss_dssp             CCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSSS
T ss_pred             CCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----CCCCcEEEeeeeeeeecccCc
Confidence            999998777654    358888999999999999999999999999999999999    77889999999999877543 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~  215 (321)
T 2c30_A          196 PKRKSLVGTPYWMAPEVISR  215 (321)
T ss_dssp             CCBCCCCSCGGGCCHHHHTT
T ss_pred             cccccccCCccccCHhhhcC
Confidence             3356789999999999865

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=227.96  Aligned_cols=160  Identities=21%  Similarity=0.253  Sum_probs=116.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++...        ..+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        64 G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~h~niv--~~~~~~~--~~~~~~lv~e~~~  131 (349)
T 2w4o_A           64 GATSIVYRCKQKGTQKPYALKVLKKTV--------DKKIVRTEIGVLLRLSHPNII--KLKEIFE--TPTEISLVLELVT  131 (349)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEC------------------CHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeccch--------hHHHHHHHHHHHHhCCCCCCc--ceeeeEe--cCCeEEEEEEeCC
Confidence            999999999999999999999987632        123568899999999999997  4455544  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +.++.+||+|||+++..... ..
T Consensus       132 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~-~~~~~~kl~Dfg~a~~~~~~~~~  207 (349)
T 2w4o_A          132 GGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP-APDAPLKIADFGLSKIVEHQVLM  207 (349)
T ss_dssp             SCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS-STTCCEEECCCC-----------
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC-CCCCCEEEccCccccccCccccc
Confidence            9997666554   3458888999999999999999999999999999999999442 23679999999999877543 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       208 ~~~~gt~~y~aPE~~~~  224 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRG  224 (349)
T ss_dssp             -----CGGGSCHHHHTT
T ss_pred             ccccCCCCccCHHHhcC
Confidence            56789999999999875

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=1.3e-32  Score=245.19  Aligned_cols=162  Identities=20%  Similarity=0.186  Sum_probs=133.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||||++++....   .....+.+.+|..++..+ .||||+.  +..++.  +...+|+||||+
T Consensus       352 G~fG~V~~~~~~~~~~~vAvK~l~~~~~~---~~~~~~~~~~E~~~l~~~~~~~~i~~--l~~~~~--~~~~~~lV~E~~  424 (674)
T 3pfq_A          352 GSFGKVMLSERKGTDELYAVKILKKDVVI---QDDDVECTMVEKRVLALPGKPPFLTQ--LHSCFQ--TMDRLYFVMEYV  424 (674)
T ss_dssp             TTTBCEEEEEESSSCCEEEEEEEEHHHHH---HTTTTHHHHHHHHHHTCTTCCTTBCC--EEEECB--CSSEEEEEEECC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEeccccc---cHHHHHHHHHHHHHHHhccCCCeEEE--EEEEEE--eCCEEEEEEeCc
Confidence            99999999999999999999999875332   233455668888888887 7898873  443433  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc--c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--A  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~--~  209 (229)
                      ++|+|..++..   ...+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+....  .
T Consensus       425 ~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl----~~~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          425 NGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE----CSSSCEEECCCTTCEECCCTTC
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE----cCCCcEEEeecceeeccccCCc
Confidence            99997766654   3468889999999999999999999999999999999999    8888999999999986532  3


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       498 ~~~~~~GT~~Y~APE~l~~  516 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAY  516 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTC
T ss_pred             ccccccCCCcccCHhhhcC
Confidence            4467899999999999875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=7.4e-33  Score=223.10  Aligned_cols=173  Identities=18%  Similarity=0.141  Sum_probs=137.9

Q ss_pred             cccceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc-
Q psy11822         43 EARKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC-  118 (229)
Q Consensus        43 ~~~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~-  118 (229)
                      ..++|.+...   |+||.||+|.+..++..||+|.+......    ....+.+.+|+.+++.++||||+.  +++++.. 
T Consensus        24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~~   97 (290)
T 1t4h_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT----KSERQRFKEEAEMLKGLQHPNIVR--FYDSWEST   97 (290)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC----HHHHHHHHHHHHHHTTCCCTTBCC--EEEEEEEE
T ss_pred             CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC----HHHHHHHHHHHHHHHhCCCCCeee--eeeeeccc
Confidence            4455555443   99999999999999999999998753222    122346789999999999999984  4444322 


Q ss_pred             -ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCC-CCcc
Q psy11822        119 -NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVR-QPYR  194 (229)
Q Consensus       119 -~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~-~~~~  194 (229)
                       ......++||||+++++|..++..   ...+++..+..++.|++.||.|||+.+  |+||||||+||++    + ..+.
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~----~~~~~~  170 (290)
T 1t4h_A           98 VKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----TGPTGS  170 (290)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEE----SSTTSC
T ss_pred             cCCCceEEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEE----ECCCCC
Confidence             234557999999999998777654   245788888999999999999999999  9999999999999    5 5679


Q ss_pred             EEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||++............||+.|+|||++.+
T Consensus       171 ~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~  204 (290)
T 1t4h_A          171 VKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE  204 (290)
T ss_dssp             EEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT
T ss_pred             EEEeeCCCcccccccccccccCCcCcCCHHHHhc
Confidence            9999999998776665566789999999998864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.4e-32  Score=228.94  Aligned_cols=162  Identities=22%  Similarity=0.272  Sum_probs=131.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++......      ....+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        62 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~------~~~~~~~E~~il~~l~hpnIv--~~~~~~~--~~~~~~lv~E~~~  131 (387)
T 1kob_A           62 GAFGVVHRCVEKATGRVFVAKFINTPYPL------DKYTVKNEISIMNQLHHPKLI--NLHDAFE--DKYEMVLILEFLS  131 (387)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCSHH------HHHHHHHHHHHHTTCCSTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEecccchh------hHHHHHHHHHHHHhCCCcCCC--eEEEEEE--eCCEEEEEEEcCC
Confidence            89999999999999999999998753211      123568899999999999997  4555443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|...+...  ...+++.++..++.|++.||.|||++||+||||||+|||+..  +..+.+||+|||+++..... ..
T Consensus       132 gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~--~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          132 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec--CCCCceEEEecccceecCCCcce
Confidence            99976665542  235888999999999999999999999999999999999932  13468999999999987654 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       208 ~~~~gt~~y~aPE~~~~  224 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDR  224 (387)
T ss_dssp             EEECSSGGGCCHHHHTT
T ss_pred             eeeccCCCccCchhccC
Confidence            45689999999999865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=230.16  Aligned_cols=163  Identities=23%  Similarity=0.266  Sum_probs=126.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+..+|+.||+|+++....      ...+.+.+|+.+++.++||||+  .+++++.  .....++||||+
T Consensus        99 ~G~~g~Vy~a~~~~~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~--~~~~~~lv~E~~  168 (373)
T 2x4f_A           99 GGRFGQVHKCEETATGLKLAAKIIKTRGM------KDKEEVKNEISVMNQLDHANLI--QLYDAFE--SKNDIVLVMEYV  168 (373)
T ss_dssp             -----CEEEEEETTTCCEEEEEEEECCSH------HHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             cCcCEEEEEEEEcCCCcEEEEEEEccccc------ccHHHHHHHHHHHHhCCCCCCC--eEEEEEE--ECCEEEEEEeCC
Confidence            39999999999999999999999876322      1234668999999999999997  4555544  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      ++++|...+...  ...+++.++..++.|++.||.|||++||+||||||+|||+...  ..+.+||+|||+++..... .
T Consensus       169 ~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          169 DGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR--DAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             TTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET--TTTEEEECCCSSCEECCTTCB
T ss_pred             CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC--CCCcEEEEeCCCceecCCccc
Confidence            999875544321  2358888889999999999999999999999999999999532  3468999999999987654 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+||+.|+|||++.+
T Consensus       245 ~~~~~gt~~y~aPE~~~~  262 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNY  262 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTT
T ss_pred             cccccCCCcEeChhhccC
Confidence            345689999999998865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=3.8e-33  Score=228.89  Aligned_cols=163  Identities=23%  Similarity=0.278  Sum_probs=121.1

Q ss_pred             CCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++.   .+|+.||+|++++.....  .......+.+|+.+++.++||||+.  +++++.  .....|+|||
T Consensus        28 G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~--~~~~~~--~~~~~~lv~e  101 (327)
T 3a62_A           28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR--NAKDTAHTKAERNILEEVKHPFIVD--LIYAFQ--TGGKLYLILE  101 (327)
T ss_dssp             ETTEEEEEEEECSSTTTTCEEEEEEECCC----------------HHHHHHHCCCTTBCC--EEEEEE--CSSCEEEEEE
T ss_pred             CCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh--hhhHHHHHHHHHHHHHhCCCCCccc--eeEEEE--cCCEEEEEEe
Confidence            899999999875   689999999987643211  1223345688999999999999984  444443  3456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++..   ...+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus       102 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~~~~~~~~  174 (327)
T 3a62_A          102 YLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML----NHQGHVKLTDFGLCKESIHD  174 (327)
T ss_dssp             CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE----CTTSCEEECCCSCC------
T ss_pred             CCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE----CCCCcEEEEeCCcccccccC
Confidence            9999987666543   2357888889999999999999999999999999999999    88889999999999865332


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        .....+||+.|+|||++.+
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~  195 (327)
T 3a62_A          175 GTVTHTFCGTIEYMAPEILMR  195 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTT
T ss_pred             CccccccCCCcCccCHhhCcC
Confidence              3345789999999999865

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=5.7e-33  Score=229.25  Aligned_cols=159  Identities=18%  Similarity=0.208  Sum_probs=128.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+|+.||+|++++..          ....+|++++.++ +||||+  .+++++.  +....|+||||+
T Consensus        33 G~~g~V~~~~~~~~~~~~avK~~~~~~----------~~~~~E~~~l~~~~~hp~iv--~~~~~~~--~~~~~~lv~E~~   98 (342)
T 2qr7_A           33 GSYSVCKRCIHKATNMEFAVKIIDKSK----------RDPTEEIEILLRYGQHPNII--TLKDVYD--DGKYVYVVTELM   98 (342)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEETTT----------CCCHHHHHHHHHHTTSTTBC--CEEEEEE--CSSEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEccc----------CChHHHHHHHHHhcCCCCcC--eEEEEEE--cCCEEEEEEeCC
Confidence            999999999999999999999986531          1335678888777 799998  4454444  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|++...+..   ...+++.++..++.||+.||.|||++||+||||||+|||+...+...+.+||+|||+++.....  
T Consensus        99 ~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           99 KGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            99996655544   2458899999999999999999999999999999999999654344457999999999877543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       176 ~~~~~~gt~~y~aPE~~~~  194 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLER  194 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHH
T ss_pred             ceeccCCCccccCHHHhcC
Confidence            3456789999999998753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=8.5e-33  Score=221.55  Aligned_cols=162  Identities=20%  Similarity=0.269  Sum_probs=129.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|++......   .......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   92 (279)
T 3fdn_A           20 GKFGNVYLAREKQSKFILALKVLFKAQLE---KAGVEHQLRREVEIQSHLRHPNIL--RLYGYFH--DATRVYLILEYAP   92 (279)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HHTCHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             CCCeEEEEEEEccCCcEEEEEEEeccccc---hhhHHHHHHHHHHHHHcCCCCCCc--chhheEe--cCCEEEEEEecCC
Confidence            99999999999999999999998764332   223345678999999999999997  4555544  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++...+..   ...+++..+..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++.........
T Consensus        93 ~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili----~~~~~~~l~Dfg~~~~~~~~~~~  165 (279)
T 3fdn_A           93 LGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSSRRT  165 (279)
T ss_dssp             TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE----CTTSCEEECSCCEESCC------
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE----cCCCCEEEEeccccccCCccccc
Confidence            9987665543   2358888889999999999999999999999999999999    88889999999999777666556


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...||+.|+|||++.+
T Consensus       166 ~~~~~~~y~aPE~~~~  181 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEG  181 (279)
T ss_dssp             --CCCCTTCCHHHHTT
T ss_pred             ccCCCCCccCHhHhcc
Confidence            7789999999999865

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=8.2e-33  Score=229.97  Aligned_cols=164  Identities=15%  Similarity=0.162  Sum_probs=120.4

Q ss_pred             CCceeeeeee-----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPT-----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|+     +..+++.||+|+++.....         .+.+|+.+++.+   .|+||+  .+++++.  .....
T Consensus        76 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------~~~~e~~~~~~l~~~~~~~iv--~~~~~~~--~~~~~  142 (365)
T 3e7e_A           76 GAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---------EFYIGTQLMERLKPSMQHMFM--KFYSAHL--FQNGS  142 (365)
T ss_dssp             CSSEEEEEEEC-------CCCCEEEEEESSCCHH---------HHHHHHHHHHHSCGGGGGGBC--CEEEEEE--CSSCE
T ss_pred             cCCEEEEEEEecCCcccccCcEEEEEEeCCCChh---------HHHHHHHHHHHhhhhhhhhhh--hhheeee--cCCCc
Confidence            9999999994     6678999999998763211         234455555545   488886  3443333  33457


Q ss_pred             ceeeeeeeCCCCCccCCCC--CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCC-------CCCCccE
Q psy11822        125 VQMMEVTRRSQYTGATAPP--PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDP-------VRQPYRV  195 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~--~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~-------~~~~~~~  195 (229)
                      ++||||+++|+|..++...  .....+++.+++.++.|++.||+|||++||+||||||+|||+..+       +...+.+
T Consensus       143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~  222 (365)
T 3e7e_A          143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL  222 (365)
T ss_dssp             EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTE
T ss_pred             EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCE
Confidence            8999999999977665421  113468889999999999999999999999999999999999330       1117899


Q ss_pred             EEeecCcceecCc----ccccceeecccCCCCccccCC
Q psy11822        196 KVIDFGSASHVSK----AVCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       196 kl~DFg~a~~~~~----~~~~~~~gt~~y~aPE~l~~~  229 (229)
                      ||+|||+|+.+..    ......+||+.|+|||++.+.
T Consensus       223 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  260 (365)
T 3e7e_A          223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK  260 (365)
T ss_dssp             EECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTC
T ss_pred             EEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCC
Confidence            9999999976542    234567899999999998763

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=8.3e-33  Score=226.32  Aligned_cols=157  Identities=17%  Similarity=0.172  Sum_probs=127.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc--ccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN--VKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~--~~~~~lv~e~  130 (229)
                      |+||.||+|++.  ++.||||+++.....       .....+|+.+++.++||||+  .+++++....  ...+++||||
T Consensus        35 G~~g~Vy~~~~~--~~~vavK~~~~~~~~-------~~~~~~E~~~l~~l~hpniv--~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           35 GRFGCVWKAQLL--NEYVAVKIFPIQDKQ-------SWQNEYEVYSLPGMKHENIL--QFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             STTCEEEEEEET--TEEEEEEEECGGGHH-------HHHHHHHHHTSTTCCCTTBC--CEEEEEEEECSSSEEEEEEEEC
T ss_pred             cCceEEEEEEEC--CCEEEEEEeecCchH-------HHHHHHHHHHHhcCCCCCch--hhcceeccCCCCCceEEEEEec
Confidence            999999999876  899999998764221       12336689999999999998  4444443322  3346899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC----------CCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL----------GLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~----------~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      +++|+|..++..    ..+++.++..++.|++.||.|||+.          +|+||||||+|||+    +..+.+||+||
T Consensus       104 ~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill----~~~~~~kL~DF  175 (322)
T 3soc_A          104 HEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL----KNNLTACIADF  175 (322)
T ss_dssp             CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE----CTTCCEEECCC
T ss_pred             CCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE----CCCCeEEEccC
Confidence            999998777654    3588889999999999999999999          99999999999999    78889999999


Q ss_pred             CcceecCcc----cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|+.....    ......||+.|+|||++.+
T Consensus       176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (322)
T 3soc_A          176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG  207 (322)
T ss_dssp             TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred             CcccccccccCccccccCccCccccCHhhccc
Confidence            999877543    2334689999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2e-32  Score=226.15  Aligned_cols=164  Identities=23%  Similarity=0.272  Sum_probs=126.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++........ ......+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        21 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   95 (346)
T 1ua2_A           21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAK-DGINRTALREIKLLQELSHPNII--GLLDAFG--HKSNISLVFDFME   95 (346)
T ss_dssp             ETTEEEEEEECSSCCSEEEEEEC-------------CTHHHHHHHHHHHCCCTTBC--CEEEEEC--CTTCCEEEEECCS
T ss_pred             cCCEEEEEEEECCCCcEEEEEEEecCCcchhh-hhhhHHHHHHHHHHhhCCCCCCC--eEEEEEe--eCCceEEEEEcCC
Confidence            89999999999999999999998764322111 12234568899999999999997  4444443  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++....+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....  .
T Consensus        96 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~~~~  168 (346)
T 1ua2_A           96 TDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRA  168 (346)
T ss_dssp             EEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSCCCC
T ss_pred             CCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE----cCCCCEEEEecccceeccCCccc
Confidence            8543333222   2358889999999999999999999999999999999999    88889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       169 ~~~~~~t~~y~aPE~~~~  186 (346)
T 1ua2_A          169 YTHQVVTRWYRAPELLFG  186 (346)
T ss_dssp             CCCSCCCCTTCCHHHHTT
T ss_pred             CCcccccccccCchHhhC
Confidence            346789999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.9e-33  Score=231.21  Aligned_cols=160  Identities=26%  Similarity=0.345  Sum_probs=125.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||||++......    ....+.+.+|+.+++.++||||+  .+++++....    ...+|+||
T Consensus        36 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv--~l~~~~~~~~~~~~~~~~~lv~  109 (367)
T 1cm8_A           36 GAYGAVCSAVDGRTGAKVAIKKLYRPFQS----ELFAKRAYRELRLLKHMRHENVI--GLLDVFTPDETLDDFTDFYLVM  109 (367)
T ss_dssp             ----CEEEEEETTTCCEEEEEECSSTTSS----HHHHHHHHHHHHHHHHCCBTTBC--CCSEEECSCSSTTTCCCCEEEE
T ss_pred             cCCeEEEEEEECCCCCEEEEEEeCccccC----HHHHHHHHHHHHHHHhCCCcCCC--CceeeEecCCccccCceEEEEE
Confidence            89999999999999999999998553211    12234668999999999999997  4444443221    23469999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+ +++|..+...    ..+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       110 e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          110 PFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADS  180 (367)
T ss_dssp             ECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCS
T ss_pred             ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE----cCCCCEEEEeeeccccccc
Confidence            999 6666665543    358888889999999999999999999999999999999    8888999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ....+||++|+|||++.+
T Consensus       181 ~-~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          181 E-MTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             S-CCSSCSCGGGCCTHHHHT
T ss_pred             c-cCcCcCCCCcCCHHHHhC
Confidence            3 356789999999999865

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=9.1e-33  Score=227.39  Aligned_cols=165  Identities=23%  Similarity=0.267  Sum_probs=132.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHH--HhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLK--RMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+++.||+|+++........  .......+.+|+.+++.++||||+  .+++++.  +....++||||
T Consensus        35 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv--~~~~~~~--~~~~~~lv~e~  110 (335)
T 3dls_A           35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII--KVLDIFE--NQGFFQLVMEK  110 (335)
T ss_dssp             SSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEEC
T ss_pred             cCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEe--eEEEEEe--eCCEEEEEEEe
Confidence            89999999999999999999998763211000  011334678899999999999997  4555544  34567899999


Q ss_pred             eeCC-CCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        131 TRRS-QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~-~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +.+| ++..+...   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......
T Consensus       111 ~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          111 HGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI----AEDFTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             CTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECCTT
T ss_pred             CCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE----cCCCcEEEeecccceECCCC
Confidence            9877 66655554   3458888999999999999999999999999999999999    77889999999999887654


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|+|||++.+
T Consensus       184 ~~~~~~~gt~~y~aPE~~~~  203 (335)
T 3dls_A          184 KLFYTFCGTIEYCAPEVLMG  203 (335)
T ss_dssp             CCBCEECSCGGGCCHHHHTT
T ss_pred             CceeccCCCccccChhhhcC
Confidence             3456789999999999865

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=7.6e-33  Score=227.13  Aligned_cols=157  Identities=17%  Similarity=0.222  Sum_probs=127.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+|+.||||++...        ...+.+.+|+.+++.+ +||||+.  +++++..  ....++||||+
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~~h~~i~~--~~~~~~~--~~~~~lv~e~~   87 (330)
T 2izr_A           20 GNFGELRLGKNLYTNEYVAIKLEPMK--------SRAPQLHLEYRFYKQLGSGDGIPQ--VYYFGPC--GKYNAMVLELL   87 (330)
T ss_dssp             -CTTSEEEEEETTTTEEEEEEEEETT--------CSSCCHHHHHHHHHHHCSCTTSCC--EEEEEEE--TTEEEEEEECC
T ss_pred             cCCceEEEEEECCCCcEEEEEEeccc--------cchHHHHHHHHHHHHhhCCCCCCE--EEEEEec--CCccEEEEEeC
Confidence            89999999999999999999987652        2234578999999999 9999974  4444433  34579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc-----EEEeecCcceec
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR-----VKVIDFGSASHV  206 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~-----~kl~DFg~a~~~  206 (229)
                       +++|..+....  ...+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.     +||+|||+++..
T Consensus        88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill----~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI----GRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CCGGGTCTTSEEECCCTTCEES
T ss_pred             -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee----ccCCCCCCceEEEEEcccceee
Confidence             88766654431  2368889999999999999999999999999999999999    65555     999999999876


Q ss_pred             Cccc---------ccceeecccCCCCccccC
Q psy11822        207 SKAV---------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~---------~~~~~gt~~y~aPE~l~~  228 (229)
                      ....         .....||+.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLG  191 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcC
Confidence            4431         246789999999999875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=1.1e-32  Score=237.81  Aligned_cols=164  Identities=21%  Similarity=0.286  Sum_probs=128.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..++..||+|+++.....    ......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        48 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~  119 (494)
T 3lij_A           48 GAYGEVLLCRDKVTHVERAIKIIRKTSVS----TSSNSKLLEEVAVLKLLDHPNIM--KLYDFFE--DKRNYYLVMECYK  119 (494)
T ss_dssp             C---EEEEEEETTTCCEEEEEEEEC---------CTTHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--eCCEEEEEEecCC
Confidence            99999999999999999999998764322    22345678999999999999998  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +..+.+||+|||+|...... ..
T Consensus       120 ~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~DfG~a~~~~~~~~~  195 (494)
T 3lij_A          120 GGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-EKDALIKIVDFGLSAVFENQKKM  195 (494)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEECBTTBCB
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC-CCCCcEEEEECCCCeECCCCccc
Confidence            9996554433   2458888899999999999999999999999999999999433 33457999999999887654 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       196 ~~~~gt~~y~aPE~l~~  212 (494)
T 3lij_A          196 KERLGTAYYIAPEVLRK  212 (494)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             cccCCCcCeeCHHHHcc
Confidence            56789999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=1.4e-32  Score=229.27  Aligned_cols=163  Identities=15%  Similarity=0.184  Sum_probs=127.7

Q ss_pred             CCceeeeeeecC-------CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDL-------EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++.       .++..||+|+++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....
T Consensus        92 G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpnIv--~~~~~~~--~~~~~  162 (370)
T 2psq_A           92 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-----EKDLSDLVSEMEMMKMIGKHKNII--NLLGACT--QDGPL  162 (370)
T ss_dssp             CSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-----HHHHHHHHHHHHHHHHSCCCTTBC--CEEEEEC--SSSSC
T ss_pred             CCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-----HHHHHHHHHHHHHHHHhcCCCCEe--eEEEEEc--cCCCE
Confidence            899999999864       3567899999875311     22344678999999999 899997  4554443  34568


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      |+||||+++|+|..++....             +...+++.++..++.||+.||.|||++||+||||||+|||+    +.
T Consensus       163 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~  238 (370)
T 2psq_A          163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TE  238 (370)
T ss_dssp             EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CT
T ss_pred             EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE----CC
Confidence            99999999999766654321             12346777788899999999999999999999999999999    88


Q ss_pred             CccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++.....    ......+|+.|+|||++.+
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  279 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  279 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC
Confidence            889999999999877543    2234567889999998865

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=3.8e-33  Score=227.21  Aligned_cols=162  Identities=17%  Similarity=0.188  Sum_probs=120.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++  +|..||+|++......    ....+.+.+|+.++++++||||+  .+++++.  +....++||||++
T Consensus        48 G~~g~V~~~~~--~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~  117 (309)
T 3p86_A           48 GSFGTVHRAEW--HGSDVAVKILMEQDFH----AERVNEFLREVAIMKRLRHPNIV--LFMGAVT--QPPNLSIVTEYLS  117 (309)
T ss_dssp             CSSEEEEEEEE--TTEEEEEEEECCCCCS----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--STTCCEEEEECCT
T ss_pred             CCCeEEEEEEE--CCCcEEEEEecCCCCC----HHHHHHHHHHHHHHHhCCCCCEe--eEEEEEE--ECCceEEEEecCC
Confidence            99999999987  4899999997653211    11234678999999999999997  4555543  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++|..++........+++..++.++.|++.||+|||++|  |+||||||+|||+    +.++.+||+|||+++..... 
T Consensus       118 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~~~  193 (309)
T 3p86_A          118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV----DKKYTVKVCDFGLSRLKASTF  193 (309)
T ss_dssp             TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE----CTTCCEEECCCC---------
T ss_pred             CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE----eCCCcEEECCCCCCccccccc
Confidence            9998777665332234888888999999999999999999  9999999999999    88889999999999866443 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~  213 (309)
T 3p86_A          194 LSSKSAAGTPEWMAPEVLRD  213 (309)
T ss_dssp             --------CCTTSCHHHHTT
T ss_pred             cccccCCCCccccChhhhcC
Confidence             2346789999999999875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=7.3e-33  Score=223.09  Aligned_cols=160  Identities=24%  Similarity=0.288  Sum_probs=123.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++ .+|+.||+|++.....    .....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        13 G~~g~V~~~~~-~~~~~~aiK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   83 (288)
T 1ob3_A           13 GTYGVVYKAQN-NYGETFALKKIRLEKE----DEGIPSTTIREISILKELKHSNIV--KLYDVIH--TKKRLVLVFEHLD   83 (288)
T ss_dssp             ETTEEEEEEEE-TTSCEEEEEEECCSSG----GGCCCHHHHHHHHGGGGCCCTTBC--CEEEEEE--CSSCEEEEEECCS
T ss_pred             CCCEEEEEEEc-CCCCEEEEEEEecccc----ccccchhHHHHHHHHHhcCCCCEe--eeeeEEc--cCCeEEEEEEecC
Confidence            89999999998 6799999998865311    122334668999999999999997  4555544  3356799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++....+...   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.....  .
T Consensus        84 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  156 (288)
T 1ob3_A           84 QDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVRK  156 (288)
T ss_dssp             EEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHCC----
T ss_pred             CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEeECccccccCccccc
Confidence            7443333222   2358888889999999999999999999999999999999    88889999999999876532  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       157 ~~~~~~t~~y~aPE~~~~  174 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMG  174 (288)
T ss_dssp             -----CCCTTCCHHHHTT
T ss_pred             cccccccccccCchheeC
Confidence            345688999999999865

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=4.3e-33  Score=224.98  Aligned_cols=162  Identities=20%  Similarity=0.191  Sum_probs=125.0

Q ss_pred             CCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|+    +..+++.||+|++....      ....+.+.+|+.+++.++||||+.  +++++...+....++||
T Consensus        21 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~lv~   92 (295)
T 3ugc_A           21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHST------EEHLRDFEREIEILKSLQHDNIVK--YKGVCYSAGRRNLKLIM   92 (295)
T ss_dssp             CSSEEEEEEEECTTCSSCCEEEEEEEESCCC------HHHHHHHHHHHHHHHTCCCTTBCC--EEEEECHHHHTSCEEEE
T ss_pred             cCCEEEEEEEEecccCCCCcEEEEEEcccCC------HHHHHHHHHHHHHHHhCCCCCEee--EEEEEecCCCCceEEEE
Confidence            9999999998    56789999999987532      122346789999999999999984  44444333334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++...  ...+++.++..++.|++.||.|||+.||+||||||+|||+    +.++.+||+|||+++....
T Consensus        93 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           93 EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             ECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCSCC----
T ss_pred             EeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE----cCCCeEEEccCcccccccC
Confidence            999999977765442  2248888889999999999999999999999999999999    7778999999999987754


Q ss_pred             c-----cccceeecccCCCCccccC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .     ......+++.|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~  191 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTE  191 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcC
Confidence            3     1233457778999998753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1.1e-32  Score=225.97  Aligned_cols=159  Identities=19%  Similarity=0.286  Sum_probs=113.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+++.||+|++....         ...+.+|+.+++.+. ||||+  .+++++.  +....|+||||+
T Consensus        22 G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~e~~~l~~l~~h~niv--~~~~~~~--~~~~~~lv~e~~   88 (325)
T 3kn6_A           22 GSFSICRKCVHKKSNQAFAVKIISKRM---------EANTQKEITALKLCEGHPNIV--KLHEVFH--DQLHTFLVMELL   88 (325)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEGGG---------HHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEECCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEChhh---------hhhHHHHHHHHHHhcCCCCee--EEEEEEE--cCCEEEEEEEcc
Confidence            999999999999999999999987531         224578899999886 99997  4555544  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++++|...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +....+||+|||+++.....  
T Consensus        89 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           89 NGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE-NDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             CSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----CEEEECCCTTCEECCC---
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC-CCcccEEEeccccceecCCCCC
Confidence            99997666554   3468899999999999999999999999999999999999543 23348999999999876543  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       165 ~~~~~~~t~~y~aPE~~~~  183 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQ  183 (325)
T ss_dssp             -------------------
T ss_pred             cccccCCCcCccCHHHhcC
Confidence            3356789999999999865

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.9e-32  Score=236.96  Aligned_cols=168  Identities=23%  Similarity=0.300  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHH-------HHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLL-------KRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      |+||.||+|++..+++.||+|+++.......       ......+.+.+|+.+++.++||||+  .+++++.  +....+
T Consensus        47 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~  122 (504)
T 3q5i_A           47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNII--KLFDVFE--DKKYFY  122 (504)
T ss_dssp             --CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEE
T ss_pred             cCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCC--eEEEEEE--cCCEEE
Confidence            9999999999999999999999876432211       0012345678999999999999997  4555544  445679


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +||||+++|+|...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +....+||+|||+|..
T Consensus       123 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~  198 (504)
T 3q5i_A          123 LVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK-NSLLNIKIVDFGLSSF  198 (504)
T ss_dssp             EEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST-TCCSSEEECCCTTCEE
T ss_pred             EEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC-CCCccEEEEECCCCEE
Confidence            99999999996555443   2458889999999999999999999999999999999999433 2234799999999988


Q ss_pred             cCcc-cccceeecccCCCCccccC
Q psy11822        206 VSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .... .....+||+.|+|||++.+
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~  222 (504)
T 3q5i_A          199 FSKDYKLRDRLGTAYYIAPEVLKK  222 (504)
T ss_dssp             CCTTSCBCCCCSCTTTCCHHHHTT
T ss_pred             cCCCCccccccCCcCCCCHHHhcc
Confidence            7654 4456789999999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=5.2e-33  Score=227.30  Aligned_cols=169  Identities=24%  Similarity=0.264  Sum_probs=132.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.............+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        23 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   98 (321)
T 2a2a_A           23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI--TLHDVYE--NRTDVVLILELVS   98 (321)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             cCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcc--eEEEEEe--cCCEEEEEEEcCC
Confidence            99999999999999999999998753211000011244678999999999999997  4444443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++..   ...+++.++..++.|++.||.|||++||+||||||+||++.........+||+|||++...... ..
T Consensus        99 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  175 (321)
T 2a2a_A           99 GGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF  175 (321)
T ss_dssp             SCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc
Confidence            9997777654   3468888999999999999999999999999999999999322111228999999999887654 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       176 ~~~~gt~~y~aPE~~~~  192 (321)
T 2a2a_A          176 KNIFGTPEFVAPEIVNY  192 (321)
T ss_dssp             CCCCSCGGGCCHHHHTT
T ss_pred             cccCCCCCccCcccccC
Confidence            56789999999999865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=1.4e-31  Score=218.66  Aligned_cols=161  Identities=17%  Similarity=0.213  Sum_probs=129.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++. +|+.||+|.+....      ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        50 G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  118 (321)
T 2qkw_B           50 GVFGKVYKGVLR-DGAKVALKRRTPES------SQGIEEFETEIETLSFCRHPHLV--SLIGFCD--ERNEMILIYKYME  118 (321)
T ss_dssp             CSSSEEEEEECT-TCCEEEEEECCSCC------SSHHHHHHHHHHGGGSCCCTTBC--CEEEECC--CTTCCEEEEECCT
T ss_pred             CCCeeEEEEEEC-CCCEEEEEEecccC------hHHHHHHHHHHHHHHhCCCCCEe--eEEEEEc--CCCeEEEEEEcCC
Confidence            999999999964 68999999876531      22344678999999999999997  4555543  3456799999999


Q ss_pred             CCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        133 RSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       133 ~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++|..++.... ....+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.....  
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  194 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL----DENFVPKITDFGISKKGTELDQ  194 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE----CTTCCEEECCCTTCEECSSSSC
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE----CCCCCEEEeecccccccccccc
Confidence            999877765432 22357888889999999999999999999999999999999    88889999999999875432  


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|+|||++.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~  215 (321)
T 2qkw_B          195 THLSTVVKGTLGYIDPEYFIK  215 (321)
T ss_dssp             CCCBCCCEEETTTCCHHHHHH
T ss_pred             cccccccCCCccccCHHHhcC
Confidence              2245679999999998753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=1e-32  Score=228.06  Aligned_cols=163  Identities=19%  Similarity=0.213  Sum_probs=128.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc------ccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN------VKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~------~~~~~l  126 (229)
                      |+||.||+|++..+|+.||+|++.....    .......+.+|+.+++.++||||+  .+++++....      ....++
T Consensus        28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~~~~l  101 (351)
T 3mi9_A           28 GTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLKHENVV--NLIEICRTKASPYNRCKGSIYL  101 (351)
T ss_dssp             CSTTSEEEEEETTTCCEEEEEECCCSSC----SSSSCHHHHHHHHHHHHCCCTTBC--CEEEEEEEC--------CEEEE
T ss_pred             CCCcEEEEEEECCCCCEEEEEEEecccc----cccchHHHHHHHHHHHhccCCCcc--cHhheeeccccccccCCceEEE
Confidence            8999999999999999999998765311    112233567899999999999997  4444443221      335789


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||++++++..+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+..
T Consensus       102 v~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A          102 VFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAF  174 (351)
T ss_dssp             EEECCSEEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEEC
T ss_pred             EEeccCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE----cCCCCEEEccchhcccc
Confidence            9999998665544433   2358888999999999999999999999999999999999    88889999999999876


Q ss_pred             Cc------ccccceeecccCCCCccccC
Q psy11822        207 SK------AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~------~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..      .......||+.|+|||++.+
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLG  202 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTT
T ss_pred             cccccccccccCCcccccCccCchhhcC
Confidence            42      12345688999999999865

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1.2e-32  Score=230.85  Aligned_cols=163  Identities=12%  Similarity=0.087  Sum_probs=131.3

Q ss_pred             C--CceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 D--DIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g--~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |  +||.||+|++..+|+.||||+++.....    ....+.+.+|+.+++.++||||+  .+++++.  +....++||||
T Consensus        36 G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~--~~~~~~lv~e~  107 (389)
T 3gni_B           36 GFEDLMTVNLARYKPTGEYVTVRRINLEACS----NEMVTFLQGELHVSKLFNHPNIV--PYRATFI--ADNELWVVTSF  107 (389)
T ss_dssp             ETTTTEEEEEEEETTTCCEEEEEEEEGGGSC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEEC
T ss_pred             CcCCceEEEEEEEcCCCCEEEEEEecccccC----hHHHHHHHHHHHHHHhCCCCCCC--cEeEEEE--ECCEEEEEEEc
Confidence            8  9999999999999999999998764221    12344678899999999999998  4555544  34467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++..++.... ...+++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++...... 
T Consensus       108 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll----~~~~~~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          108 MAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----SVDGKVYLSGLRSNLSMISHG  182 (389)
T ss_dssp             CTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCGGGCEECEETT
T ss_pred             cCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----cCCCCEEEcccccceeecccc
Confidence            99999776654321 1358888899999999999999999999999999999999    88889999999998765321 


Q ss_pred             --------cccceeecccCCCCccccC
Q psy11822        210 --------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --------~~~~~~gt~~y~aPE~l~~  228 (229)
                              .....+||+.|+|||++.+
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQ  209 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred             ccccccccccccccccccccCHHHHhc
Confidence                    1233588999999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=1.9e-32  Score=224.58  Aligned_cols=161  Identities=17%  Similarity=0.128  Sum_probs=126.1

Q ss_pred             CCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+++   .||||+++....     ....+.+.+|+.+++.++||||+  .+++++.  +....++|||
T Consensus        60 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e  130 (325)
T 3kul_A           60 GDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-----ERQRRDFLSEASIMGQFDHPNII--RLEGVVT--RGRLAMIVTE  130 (325)
T ss_dssp             TTTEEEEEEEECCTTSCCEEEEEEEECTTCC-----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--GGGCCEEEEE
T ss_pred             CCCcEEEEEEEecCCCCCceEEEEecCCCCC-----HHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--eCCccEEEee
Confidence            9999999999876555   599999875321     12234678999999999999998  4454443  3456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus       131 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          131 YMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV----DSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             CCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCSSCEECC--
T ss_pred             CCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----CCCCCEEECCCCcccccccC
Confidence            99999987776432  2358888999999999999999999999999999999999    88889999999999887543


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......+|+.|+|||++.+
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~  228 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAF  228 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHH
T ss_pred             ccceeeccCCCCcccccCHhHhcC
Confidence                 1223456778999998753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=3.1e-32  Score=229.27  Aligned_cols=162  Identities=21%  Similarity=0.225  Sum_probs=120.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccc-cccCccccceehhhhhhc--ccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGE-ALNHAFVTLAHLVDYAHC--NNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~-~l~h~ni~~~~~~~~~~~--~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..+|+.||||+++..           ..+.+|+.++. ..+||||+  .+++++..  .+...+|+||
T Consensus        72 ~G~~g~V~~~~~~~~~~~vAiK~~~~~-----------~~~~~E~~~~~~~~~hp~iv--~l~~~~~~~~~~~~~~~lv~  138 (400)
T 1nxk_A           72 LGINGKVLQIFNKRTQEKFALKMLQDC-----------PKARREVELHWRASQCPHIV--RIVDVYENLYAGRKCLLIVM  138 (400)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEECS-----------HHHHHHHHHHHHHTTSTTBC--CEEEEEEEEETTEEEEEEEE
T ss_pred             eccCeEEEEEEECCCCCEEEEEEeCcc-----------hhHHHHHHHHHHhcCCCCcc--eEeEEEeecccCCcEEEEEE
Confidence            399999999999999999999998642           12356777764 45899997  44444432  2345679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++|+|..++.... ...+++.++..++.||+.||.|||++||+||||||+|||+... ..++.+||+|||+++....
T Consensus       139 E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          139 ECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             ECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-STTCCEEECCCTTCEECC-
T ss_pred             EeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC-CCCccEEEEecccccccCC
Confidence            9999999766655422 2358999999999999999999999999999999999999332 2267999999999987754


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....+||+.|+|||++.+
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~  237 (400)
T 1nxk_A          217 HNSLTTPCYTPYYVAPEVLGP  237 (400)
T ss_dssp             ----------CTTCCGGGSCC
T ss_pred             CCccccCCCCCCccCHhhcCC
Confidence            3 3456789999999999865

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=1.9e-32  Score=219.19  Aligned_cols=162  Identities=22%  Similarity=0.337  Sum_probs=132.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|.+....      ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        20 G~~g~V~~~~~~~~~~~~a~k~~~~~~------~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   89 (277)
T 3f3z_A           20 GSWGEVKIAVQKGTRIRRAAKKIPKYF------VEDVDRFKQEIEIMKSLDHPNII--RLYETFE--DNTDIYLVMELCT   89 (277)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEGGG------CSCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             cCCEEEEEEEeCCCCcEEEEEeehhhc------cchHHHHHHHHHHHHhCCCCCEe--eEEEEEe--cCCeEEEEEeccC
Confidence            999999999999999999999987632      22345678999999999999997  4555544  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++......   ...+++.++..++.|++.||.|||++||+||||||+||++..+ +.++.+||+|||++...... ..
T Consensus        90 ~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           90 GGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-SPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             SCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECCTTSCB
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC-CCCCcEEEEecccceeccCccch
Confidence            9997655443   2358888899999999999999999999999999999999554 45679999999999877554 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       166 ~~~~~t~~y~aPE~~~~  182 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEG  182 (277)
T ss_dssp             CCCCSCTTTCCHHHHTT
T ss_pred             hccCCCCCccChHHhcc
Confidence            56789999999999865

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=3.9e-32  Score=226.25  Aligned_cols=160  Identities=25%  Similarity=0.375  Sum_probs=113.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||||++......    ......+.+|+.+++.++||||+  .+++++...    ....+++||
T Consensus        40 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~~~~~~~~~~~~~lv~  113 (367)
T 2fst_X           40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQS----IIHAKRTYRELRLLKHMKHENVI--GLLDVFTPARSLEEFNDVYLVT  113 (367)
T ss_dssp             ---CCEEEEEETTTTEEEEEEECSSTTSS----HHHHHHHHHHHHHHHHCCCTTBC--CCSEEECSCSSGGGCCCCEEEE
T ss_pred             cCCeEEEEEEECCCCCEEEEEEeCccccC----HHHHHHHHHHHHHHHhCCCCCCC--cEEEEEecCCccccCCeEEEEe
Confidence            89999999999999999999998653211    12234568999999999999997  444444321    224579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |++ +++|..++..    ..+++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       114 e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll----~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          114 HLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             ECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECC---------
T ss_pred             ccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE----CCCCCEEEeeccccccccc
Confidence            998 5666666554    468888999999999999999999999999999999999    8888999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....||++|+|||++.+
T Consensus       185 ~-~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          185 E-MTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             -------CCCTTCCHHHHTT
T ss_pred             c-CCCcCcCcCccChHHHcC
Confidence            3 356789999999999865

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.5e-32  Score=224.92  Aligned_cols=160  Identities=23%  Similarity=0.253  Sum_probs=121.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++....     ......+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        13 G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~   83 (324)
T 3mtl_A           13 GTYATVYKGKSKLTDNLVALKEIRLEHE-----EGAPCTAIREVSLLKDLKHANIV--TLHDIIH--TEKSLTLVFEYLD   83 (324)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECC-----------CCCCCCCHHHHSCCCCTTBC--CEEEEEE--CSSCEEEEEECCS
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEecccc-----cccchhHHHHHHHHHhcCCCCCC--eeeeEEe--eCCEEEEEecccc
Confidence            9999999999999999999999875421     12223557899999999999997  4454443  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++....+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....  .
T Consensus        84 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~a~~~~~~~~~  156 (324)
T 3mtl_A           84 KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI----NERGELKLADFGLARAKSIPTKT  156 (324)
T ss_dssp             EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE----CTTCCEEECSSSEEECC------
T ss_pred             cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE----CCCCCEEEccCcccccccCCccc
Confidence            7544433322   2347888889999999999999999999999999999999    78889999999999876533  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       157 ~~~~~~t~~y~aPE~~~~  174 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLG  174 (324)
T ss_dssp             ------CGGGCCHHHHTT
T ss_pred             cccccCcccccChhhhcC
Confidence            345688999999999865

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.9e-32  Score=223.71  Aligned_cols=162  Identities=20%  Similarity=0.251  Sum_probs=125.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|+++...     .....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        16 G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~   86 (317)
T 2pmi_A           16 GTYATVYKGLNKTTGVYVALKEVKLDS-----EEGTPSTAIREISLMKELKHENIV--RLYDVIH--TENKLTLVFEFMD   86 (317)
T ss_dssp             ---CEEEEEECSSSCCEEEEEEEECCS-----TTCSCHHHHHHHHHHTTCCBTTBC--CEEEEEC--CTTEEEEEEECCC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeeccc-----ccccHHHHHHHHHHHHhcCCCCcc--eEEEEEE--ECCeEEEEEEecC
Confidence            899999999999999999999986531     122334668899999999999997  4555544  3446799999999


Q ss_pred             CCCCCccCCC---CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        133 RSQYTGATAP---PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       133 ~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      + ++..++..   ......+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus        87 ~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           87 N-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI----NKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             C-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCSSCEETTSC
T ss_pred             C-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE----cCCCCEEECcCccceecCCC
Confidence            6 43332221   0112347777888999999999999999999999999999999    88889999999999887543


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|+|||++.+
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~  182 (317)
T 2pmi_A          162 VNTFSSEVVTLWYRAPDVLMG  182 (317)
T ss_dssp             CCCCCCCCSCCTTCCHHHHTT
T ss_pred             cccCCCCcccccccCchHhhC
Confidence              3345689999999999865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=3.3e-32  Score=220.06  Aligned_cols=157  Identities=18%  Similarity=0.142  Sum_probs=121.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc--ccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA--LNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|++  +++.||+|++......         .+.+|.+++..  ++||||+.+..............++||||
T Consensus        19 G~~g~V~~~~~--~~~~vavK~~~~~~~~---------~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~   87 (301)
T 3q4u_A           19 GRYGEVWRGSW--QGENVAVKIFSSRDEK---------SWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY   87 (301)
T ss_dssp             CSSEEEEEEEE--TTEEEEEEEECGGGHH---------HHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             CCCcEEEEEEE--CCEEEEEEEeccccch---------hhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhh
Confidence            99999999987  5899999998754211         22334444443  79999984332222222234557999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH--------HCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK--------QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH--------~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      +++|+|..++..    ..+++..+..++.|++.||.|||        +++|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           88 HEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV----KKNGQCCIADLGL  159 (301)
T ss_dssp             CTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCTT
T ss_pred             ccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE----cCCCCEEEeeCCC
Confidence            999998777654    46888889999999999999999        9999999999999999    7888999999999


Q ss_pred             ceecCccc------ccceeecccCCCCccccC
Q psy11822        203 ASHVSKAV------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~~------~~~~~gt~~y~aPE~l~~  228 (229)
                      |+......      .....||+.|+|||++.+
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE  191 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTT
T ss_pred             eeecccccccccccccccccccceeChhhhcC
Confidence            98764431      234589999999999865

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=7.3e-33  Score=238.37  Aligned_cols=165  Identities=21%  Similarity=0.332  Sum_probs=133.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++......   .....+.+.+|+.+++.++||||+  .+++++.  +....++||||+.
T Consensus        37 G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~  109 (484)
T 3nyv_A           37 GSFGEVILCKDKITGQECAVKVISKRQVK---QKTDKESLLREVQLLKQLDHPNIM--KLYEFFE--DKGYFYLVGEVYT  109 (484)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEETTTCC---BSSCHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCEEEEEEEECCCCCEEEEEEEEhhhcc---cchHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--eCCEEEEEEecCC
Confidence            99999999999999999999998653110   122345678999999999999997  4555544  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +..+.+||+|||+|+..... ..
T Consensus       110 ~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~~~  185 (484)
T 3nyv_A          110 GGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-SKDANIRIIDFGLSTHFEASKKM  185 (484)
T ss_dssp             SCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCTTHHHHBCCCCSH
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC-CCCCcEEEEeeeeeEEccccccc
Confidence            9996555443   2468889999999999999999999999999999999999543 34679999999999877554 34


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ...+||+.|+|||++.+
T Consensus       186 ~~~~gt~~y~aPE~~~~  202 (484)
T 3nyv_A          186 KDKIGTAYYIAPEVLHG  202 (484)
T ss_dssp             HHHTTGGGTCCHHHHHT
T ss_pred             ccCCCCccccCceeecC
Confidence            56789999999999865

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=3.4e-32  Score=218.55  Aligned_cols=162  Identities=22%  Similarity=0.285  Sum_probs=134.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++......   .....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        25 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   97 (284)
T 2vgo_A           25 GKFGNVYLAREKQNKFIMALKVLFKSQLE---KEGVEHQLRREIEIQSHLRHPNIL--RMYNYFH--DRKRIYLMLEFAP   97 (284)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEEcccccc---hHHHHHHHHHHHHHHhcCCCCCEe--eEEEEEE--cCCEEEEEEEeCC
Confidence            99999999999999999999998764332   122345678999999999999997  4454443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++...+..   ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++.........
T Consensus        98 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  170 (284)
T 2vgo_A           98 RGELYKELQK---HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM----GYKGELKIADFGWSVHAPSLRRR  170 (284)
T ss_dssp             TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECSSSCBC
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE----cCCCCEEEecccccccCcccccc
Confidence            9887665544   2358888899999999999999999999999999999999    77789999999999877665556


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...||+.|+|||++.+
T Consensus       171 ~~~~~~~y~aPE~~~~  186 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEG  186 (284)
T ss_dssp             CCCSCGGGCCHHHHTT
T ss_pred             cccCCCCcCCHHHhcc
Confidence            7789999999999865

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.2e-32  Score=226.03  Aligned_cols=164  Identities=21%  Similarity=0.215  Sum_probs=120.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++.....    ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        45 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  116 (329)
T 3gbz_A           45 GTYGEVYKAIDTVTNETVAIKRIRLEHEE----EGVPGTAIREVSLLKELQHRNII--ELKSVIH--HNHRLHLIFEYAE  116 (329)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEECCCCC------------CHHHHHHGGGCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             cCCeEEEEEEECCCCceEEEEEEcccccc----cccchhHHHHHHHHHHcCCCCcc--eEEEEEe--cCCEEEEEEecCC
Confidence            99999999999999999999998753221    22234567899999999999997  4454544  3446799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEeecCcceecCcc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      + ++..+...   ...+++.++..++.|++.||.|||++||+||||||+|||+...+ +..+.+||+|||+++.....  
T Consensus       117 ~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~  192 (329)
T 3gbz_A          117 N-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR  192 (329)
T ss_dssp             E-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred             C-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence            6 54444333   23588888999999999999999999999999999999996543 34567999999999876533  


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       193 ~~~~~~~t~~y~aPE~~~~  211 (329)
T 3gbz_A          193 QFTHEIITLWYRPPEILLG  211 (329)
T ss_dssp             -------CCTTCCHHHHTT
T ss_pred             ccCCCcCCccccCHHHhcC
Confidence            3355688999999999865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=7.3e-32  Score=215.91  Aligned_cols=163  Identities=18%  Similarity=0.270  Sum_probs=118.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++......   .....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        22 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   94 (278)
T 3cok_A           22 GSFAGVYRAESIHTGLEVAIKMIDKKAMY---KAGMVQRVQNEVKIHCQLKHPSIL--ELYNYFE--DSNYVYLVLEMCH   94 (278)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHTTBCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CCceEEEEEEEccCCceEEEEEeehhhhh---hhhHHHHHHHHHHHHHhCCCCCeE--eEEEEEc--cCCeEEEEEecCC
Confidence            99999999999889999999998764322   223345678999999999999997  4455543  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  .
T Consensus        95 ~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  168 (278)
T 3cok_A           95 NGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL----TRNMNIKIADFGLATQLKMPHEK  168 (278)
T ss_dssp             TEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE----CTTCCEEECCCTTCEECC-----
T ss_pred             CCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----cCCCCEEEEeecceeeccCCCCc
Confidence            99876665542  2358888899999999999999999999999999999999    77889999999999877533  2


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       169 ~~~~~~~~~y~aPE~~~~  186 (278)
T 3cok_A          169 HYTLCGTPNYISPEIATR  186 (278)
T ss_dssp             ------------------
T ss_pred             ceeccCCCCcCCcchhcC
Confidence            345689999999999865

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=3.4e-32  Score=218.94  Aligned_cols=166  Identities=21%  Similarity=0.307  Sum_probs=127.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..+|+|++....     .....+.+.+|+++++.++||||+  .+++++.  +....++||||++
T Consensus        33 G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~  103 (285)
T 3is5_A           33 GAFGDVHLVEERSSGLERVIKTINKDR-----SQVPMEQIEAEIEVLKSLDHPNII--KIFEVFE--DYHNMYIVMETCE  103 (285)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEGGG-----CCSCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEECCCS
T ss_pred             CCCeEEEEEEEccCCceEEEEEeeccc-----cchhHHHHHHHHHHHHhCCCchHH--hHHHhee--cCCeEEEEEEeCC
Confidence            999999999999999999999987632     122345678999999999999997  4555543  3455799999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      ++++...+... .....+++..+..++.|++.||.|||++||+||||||+||++... +..+.+||+|||++...... .
T Consensus       104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~-~~~~~~kl~Dfg~a~~~~~~~~  182 (285)
T 3is5_A          104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEH  182 (285)
T ss_dssp             CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS-STTCCEEECCCCCCCC------
T ss_pred             CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC-CCCCCEEEEeeecceecCCccc
Confidence            99865544221 112358888899999999999999999999999999999999543 44568999999999876543 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       183 ~~~~~~t~~y~aPE~~~~  200 (285)
T 3is5_A          183 STNAAGTALYMAPEVFKR  200 (285)
T ss_dssp             ----CTTGGGCCHHHHTT
T ss_pred             CcCcccccCcCChHHhcc
Confidence            356789999999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=3.3e-32  Score=220.29  Aligned_cols=163  Identities=17%  Similarity=0.189  Sum_probs=128.4

Q ss_pred             CCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|+    +..+++.||+|+++...     .....+.+.+|+.+++.++||||+  .+++++.......+++||
T Consensus        32 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~~~~~~~~~lv~  104 (302)
T 4e5w_A           32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPES-----GGNHIADLKKEIEILRNLYHENIV--KYKGICTEDGGNGIKLIM  104 (302)
T ss_dssp             CSSEEEEEEEECTTSSSCSEEEEEEEEC----------CCHHHHHHHHHHHHTCCCTTBC--CEEEEEEC---CCEEEEE
T ss_pred             CCceEEEEEEEccccCccCeEEEEEEecccc-----cchhHHHHHHHHHHHHhCCCCCee--eeeeEEecCCCceEEEEE
Confidence            9999999998    66789999999987642     123345678999999999999997  445454443335578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++.....
T Consensus       105 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A          105 EFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV----ESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             ECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCT
T ss_pred             EeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE----cCCCCEEECcccccccccC
Confidence            999999977765331  2348888899999999999999999999999999999999    7777999999999988754


Q ss_pred             c-----cccceeecccCCCCccccC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .     ......||+.|+|||++.+
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~  203 (302)
T 4e5w_A          179 DKEYYTVKDDRDSPVFWYAPECLMQ  203 (302)
T ss_dssp             TCCEEECCCCTTCCGGGCCHHHHHH
T ss_pred             CCcceeccCCCCCCccccCCeeecC
Confidence            3     2234678888999998754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.5e-32  Score=223.23  Aligned_cols=161  Identities=22%  Similarity=0.269  Sum_probs=125.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++......    ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        14 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   85 (311)
T 4agu_A           14 GSYGVVFKCRNRDTGQIVAIKKFLESEDD----PVIKKIALREIRMLKQLKHPNLV--NLLEVFR--RKRRLHLVFEYCD   85 (311)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECCCCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             cCCeEEEEEEeCCCCcEEEEEEeeccccc----hHHHHHHHHHHHHHHhCCCCCcc--chhheee--cCCeEEEEEEeCC
Confidence            99999999999999999999987543211    11233567899999999999997  4555544  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  .
T Consensus        86 ~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  158 (311)
T 4agu_A           86 HTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI----TKHSVIKLCDFGFARLLTGPSDY  158 (311)
T ss_dssp             EEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             CchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE----cCCCCEEEeeCCCchhccCcccc
Confidence            9987766544   3458888899999999999999999999999999999999    77889999999999887543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             -------GGGCCHHHHHT
T ss_pred             cCCCcCCccccChHHHhc
Confidence            346789999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=8.3e-32  Score=215.27  Aligned_cols=162  Identities=23%  Similarity=0.303  Sum_probs=125.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++.....   ......+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   94 (276)
T 2h6d_A           22 GTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQNLKLFRHPHII--KLYQVIS--TPTDFFMVMEYVS   94 (276)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHH---HHTTCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCeEEEEEEECCCCceEEEEEeccccc---cchhHHHHHHHHHHHHhcCCCCCEe--EEEEEEe--cCCeEEEEEeccC
Confidence            9999999999998999999999876432   2233455778999999999999997  4444443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +++|..++..   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++...... ..
T Consensus        95 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~l~dfg~~~~~~~~~~~  167 (276)
T 2h6d_A           95 GGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFL  167 (276)
T ss_dssp             SCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE----CTTSCEEECCCCGGGCCCC----
T ss_pred             CCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE----CCCCCEEEeecccccccCCCcce
Confidence            9997766544   2357888899999999999999999999999999999999    77889999999999877553 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       168 ~~~~~~~~y~aPE~~~~  184 (276)
T 2h6d_A          168 RTSCGSPNYAAPEVISG  184 (276)
T ss_dssp             ---------CCTGGGTT
T ss_pred             ecccCCccccCHHHHcC
Confidence            45689999999999875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=3e-32  Score=227.23  Aligned_cols=160  Identities=26%  Similarity=0.360  Sum_probs=117.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc----ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN----VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~----~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.||||++......    ....+.+.+|+.+++.++||||+.  +++++....    ....++||
T Consensus        36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~--~~~~~~~~~~~~~~~~~~lv~  109 (371)
T 2xrw_A           36 GAQGIVCAAYDAILERNVAIKKLSRPFQN----QTHAKRAYRELVLMKCVNHKNIIG--LLNVFTPQKSLEEFQDVYIVM  109 (371)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEECTTSS----HHHHHHHHHHHHHHHHCCCTTBCC--EEEEECSCCSTTTCCEEEEEE
T ss_pred             cCCEEEEEEEECCCCceEEEEEeccccCC----hHHHHHHHHHHHHHHhcCCCCccc--eEEeeccccccccccceEEEE
Confidence            99999999999999999999998653211    122345688999999999999984  444433221    23579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++.+..+. .     .+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       110 e~~~~~l~~~~~-~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          110 ELMDANLCQVIQ-M-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  179 (371)
T ss_dssp             ECCSEEHHHHHH-S-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCCC------
T ss_pred             EcCCCCHHHHHh-h-----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE----cCCCCEEEEEeeccccccc
Confidence            999976544432 2     37778889999999999999999999999999999999    8888999999999987755


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......||+.|+|||++.+
T Consensus       180 ~~~~~~~~gt~~y~aPE~~~~  200 (371)
T 2xrw_A          180 SFMMTPYVVTRYYRAPEVILG  200 (371)
T ss_dssp             ----------CTTCCHHHHTT
T ss_pred             ccccCCceecCCccCHHHhcC
Confidence            4 3356789999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=2.3e-32  Score=228.36  Aligned_cols=161  Identities=16%  Similarity=0.132  Sum_probs=129.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++....     ....+.+.+|+++++.++||||+  .+++++.  .....++||||++
T Consensus       125 G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~  195 (377)
T 3cbl_A          125 GNFGEVFSGRLRADNTLVAVKSCRETLP-----PDLKAKFLQEARILKQYSHPNIV--RLIGVCT--QKQPIYIVMELVQ  195 (377)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEECCTTSC-----HHHHTTTTHHHHHHTTCCCTTBC--CEEEEEC--SSSSCEEEEECCT
T ss_pred             CCCCeEEEEEEecCCeEEEEEEccccCC-----HHHHHHHHHHHHHHHhCCCCCEE--EEEEEEe--cCCCcEEEEEcCC
Confidence            8999999999998999999999875311     12334678999999999999998  4444443  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc-
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC-  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~-  211 (229)
                      +|+|..++...  ...+++.++..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+|+....... 
T Consensus       196 ~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~----~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          196 GGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV----TEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             TCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECTTSEEE
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE----cCCCcEEECcCCCceecCCCcee
Confidence            99976665431  2347888889999999999999999999999999999999    7788999999999987654322 


Q ss_pred             ---cceeecccCCCCccccC
Q psy11822        212 ---NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ---~~~~gt~~y~aPE~l~~  228 (229)
                         ....+++.|+|||++.+
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~  289 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNY  289 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHH
T ss_pred             ecCCCCCCCcCcCCHhHhcc
Confidence               22356788999998753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=2.1e-32  Score=231.70  Aligned_cols=162  Identities=25%  Similarity=0.354  Sum_probs=123.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh--cccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH--CNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~--~~~~~~~~lv~e~  130 (229)
                      |+||.||+|++..+|+.||||++...          .....+|+++++.++||||+.+..+.+..  ..+...+++||||
T Consensus        65 G~fg~Vy~~~~~~~~~~vaiK~~~~~----------~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~  134 (420)
T 1j1b_A           65 GSFGVVYQAKLCDSGELVAIKKVLQD----------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  134 (420)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEECC----------TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeccc----------chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence            99999999999999999999987542          12346799999999999998533222111  1223346789999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~~  209 (229)
                      ++++.+..+.........+++..+..++.||+.||.|||++||+||||||+|||+    +. .+.+||+|||+++.....
T Consensus       135 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl----~~~~~~~kl~DFG~a~~~~~~  210 (420)
T 1j1b_A          135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSAKQLVRG  210 (420)
T ss_dssp             CCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE----ETTTTEEEECCCTTCEECCTT
T ss_pred             ccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEE----eCCCCeEEeccchhhhhcccC
Confidence            9986533221100112458888889999999999999999999999999999999    53 357899999999977543


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       211 ~~~~~~~~t~~y~aPE~~~~  230 (420)
T 1j1b_A          211 EPNVSYICSRYYRAPELIFG  230 (420)
T ss_dssp             CCCCSCCSCTTSCCHHHHTT
T ss_pred             CCceeeeeCCCcCCHHHHcC
Confidence             3346789999999999865

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=2.9e-32  Score=219.99  Aligned_cols=173  Identities=20%  Similarity=0.263  Sum_probs=136.7

Q ss_pred             ccccceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc
Q psy11822         42 KEARKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC  118 (229)
Q Consensus        42 ~~~~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~  118 (229)
                      ....+|.+...   |+||.||+|.+..+++.||+|++......   .....+.+.+|+.+++.++||||+  .+++++. 
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~-   85 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQHVV--GFHGFFE-   85 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---SHHHHHHHHHHHHHHHTCCCTTBC--CEEEEEE-
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc---CHHHHHHHHHHHHHHHhCCCCCEe--eeeeeec-
Confidence            34445554443   99999999999999999999998653211   112334668899999999999997  4454543 


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                       +....++||||++++++..+...   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+
T Consensus        86 -~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~  157 (294)
T 2rku_A           86 -DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIG  157 (294)
T ss_dssp             -CSSEEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEEC
T ss_pred             -cCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE----cCCCCEEEE
Confidence             34457999999999997666543   2358888899999999999999999999999999999999    778899999


Q ss_pred             ecCcceecCcc--cccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||++......  ......||+.|+|||++.+
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (294)
T 2rku_A          158 DFGLATKVEYDGERKKVLCGTPNYIAPEVLSK  189 (294)
T ss_dssp             CCTTCEECCSTTCCBCCCCSCCSSCCHHHHTT
T ss_pred             eccCceecccCccccccccCCCCcCCcchhcc
Confidence            99999877532  3345689999999999865

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.97  E-value=5.6e-32  Score=224.90  Aligned_cols=169  Identities=14%  Similarity=0.104  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCC-----CcEEEEehhhHHHHHHHHHhh-----hhhhhhccccccccccCccccceehhhhhhc--cc
Q psy11822         53 DDIGQVNVPTDLEG-----GELLAEKADRREFIDLLKRML-----TMDQVERRITPGEALNHAFVTLAHLVDYAHC--NN  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~-----~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~  120 (229)
                      |+||.||+|.+..+     ++.||+|++.........+..     ....+..|+..++.++||||+.  +++++..  ..
T Consensus        46 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~--~~~~~~~~~~~  123 (364)
T 3op5_A           46 GGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK--YWGSGLHDKNG  123 (364)
T ss_dssp             C-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC--EEEEEEEEETT
T ss_pred             CCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe--EEeeeeeccCC
Confidence            89999999988664     589999997653222111111     1123455667788899999984  4444332  22


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ....++||||+ +++|..++...  ...+++.+++.++.|++.||+|||++||+||||||+|||+...  ..+.+||+||
T Consensus       124 ~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~--~~~~~kl~DF  198 (364)
T 3op5_A          124 KSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK--NPDQVYLVDY  198 (364)
T ss_dssp             EEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS--CTTCEEECCC
T ss_pred             cceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC--CCCeEEEEEC
Confidence            34579999999 87876665431  2458999999999999999999999999999999999999421  5679999999


Q ss_pred             CcceecCccc---------ccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAV---------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~---------~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|+.+....         .....||+.|+|||++.+
T Consensus       199 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  235 (364)
T 3op5_A          199 GLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG  235 (364)
T ss_dssp             TTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT
T ss_pred             CcceecccCCcccccccCcccccCCCCCccCHHHhCC
Confidence            9998775431         134569999999999876

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=2.8e-32  Score=224.34  Aligned_cols=173  Identities=20%  Similarity=0.263  Sum_probs=137.2

Q ss_pred             ccccceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc
Q psy11822         42 KEARKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC  118 (229)
Q Consensus        42 ~~~~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~  118 (229)
                      ....+|.+...   |+||.||+|.+..+++.||+|++......   .....+.+.+|+.+++.++||||+  .+++++. 
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~-  111 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQHVV--GFHGFFE-  111 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---SHHHHHHHHHHHHHHHTCCCTTBC--CEEEEEE-
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc---CHHHHHHHHHHHHHHHhCCCCCCC--eEEEEEe-
Confidence            34445554444   89999999999999999999998653211   112334668899999999999997  4455544 


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                       +....++||||++++++..+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+
T Consensus       112 -~~~~~~lv~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~  183 (335)
T 2owb_A          112 -DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL----NEDLEVKIG  183 (335)
T ss_dssp             -CSSEEEEEECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEEC
T ss_pred             -cCCeEEEEEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE----cCCCCEEEe
Confidence             34567999999999997666543   2358888899999999999999999999999999999999    778899999


Q ss_pred             ecCcceecCcc--cccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||++......  ......||+.|+|||++.+
T Consensus       184 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  215 (335)
T 2owb_A          184 DFGLATKVEYDGERKKVLCGTPNYIAPEVLSK  215 (335)
T ss_dssp             CCTTCEECCSTTCCBCCCCSCCSSCCHHHHHT
T ss_pred             eccCceecccCcccccccCCCccccCHHHhcc
Confidence            99999877532  3355789999999999865

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=6.7e-32  Score=221.16  Aligned_cols=155  Identities=20%  Similarity=0.326  Sum_probs=128.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+++.||+|+++..         ..+.+.+|+.+++.++ ||||+  .+++++........++||||+
T Consensus        47 G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~E~~~l~~l~~~~~i~--~~~~~~~~~~~~~~~lv~e~~  115 (330)
T 3nsz_A           47 GKYSEVFEAINITNNEKVVVKILKPV---------KKKKIKREIKILENLRGGPNII--TLADIVKDPVSRTPALVFEHV  115 (330)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECSC---------CHHHHHHHHHHHHHHTTSTTBC--CEEEEEECTTTCCEEEEEECC
T ss_pred             cCCeEEEEEEECCCCcEEEEEEeccc---------chHHHHHHHHHHHHcCCCCCEE--EeeeeeccCCCCceEEEEecc
Confidence            99999999999999999999998642         1235688999999996 99997  445555443345678999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc-cEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY-RVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~-~~kl~DFg~a~~~~~~-  209 (229)
                      +++++..+..      .+++.++..++.|++.||.|||++||+||||||+|||+    +.++ .+||+|||+|+..... 
T Consensus       116 ~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          116 NNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI----DHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             CCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTTTEEEECCCTTCEECCTTC
T ss_pred             CchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----cCCCCEEEEEeCCCceEcCCCC
Confidence            9999877754      37888889999999999999999999999999999999    5444 8999999999877543 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       186 ~~~~~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          186 EYNVRVASRYFKGPELLVD  204 (330)
T ss_dssp             CCCSCCSCGGGCCHHHHTT
T ss_pred             ccccccccccccChhhhcC
Confidence            3456789999999999865

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=2.5e-32  Score=222.47  Aligned_cols=161  Identities=25%  Similarity=0.224  Sum_probs=119.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||+||+|++..+|+.||||++.........    .....+|+..+..+ +||||+  .+++++.  +....++||||+
T Consensus        68 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~----~~~~~~e~~~~~~~~~h~~iv--~l~~~~~--~~~~~~lv~e~~  139 (311)
T 3p1a_A           68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD----RARKLAEVGSHEKVGQHPCCV--RLEQAWE--EGGILYLQTELC  139 (311)
T ss_dssp             ETTEEEEEEEETTTSCEEEEEEESSSCCSHHH----HHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECC
T ss_pred             CCCeEEEEEEECCCCeEEEEEEecccccChHH----HHHHHHHHHHHHHhcCCCcEE--EEEEEEE--eCCEEEEEEecc
Confidence            99999999999999999999986542111111    11224455555444 899997  4454443  445679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      .++....+...   ...+++..+..++.|++.||.|||+.+|+||||||+|||+    +.++.+||+|||++...... .
T Consensus       140 ~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~DFG~a~~~~~~~~  212 (311)
T 3p1a_A          140 GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL----GPRGRCKLGDFGLLVELGTAGA  212 (311)
T ss_dssp             CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CGGGCEEECCCTTCEECC----
T ss_pred             CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE----CCCCCEEEccceeeeecccCCC
Confidence            55443333222   2358888999999999999999999999999999999999    88889999999999887554 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       213 ~~~~~gt~~y~aPE~~~~  230 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQG  230 (311)
T ss_dssp             --CCCCCGGGCCGGGGGT
T ss_pred             CcccCCCccccCHhHhcC
Confidence            345679999999999875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=2.4e-31  Score=237.65  Aligned_cols=157  Identities=22%  Similarity=0.273  Sum_probs=125.0

Q ss_pred             CCceeeeeeecCC-CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc---cccceee
Q psy11822         53 DDIGQVNVPTDLE-GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV---KASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~---~~~~lv~  128 (229)
                      |+||.||+|.+.. +|+.||||++.....     ......+.+|+.+++.++||||+  .+++++...+.   ...|+||
T Consensus        91 G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~~~~~~~~~~~~lv~  163 (681)
T 2pzi_A           91 GGLGWIYLALDRNVNGRPVVLKGLVHSGD-----AEAQAMAMAERQFLAEVVHPSIV--QIFNFVEHTDRHGDPVGYIVM  163 (681)
T ss_dssp             ETTEEEEEEEEGGGTTEEEEEEESCSSCC-----HHHHHHHHHHHGGGGGCCCTTBC--CEEEEEEEECTTSCEEEEEEE
T ss_pred             CCCeEEEEEEEcCCCCcEEEEEEeCccCC-----HHHHHHHHHHHHHHHhcCCCCcC--eEeeeEeecCCCCCceeEEEE
Confidence            9999999999876 789999998764211     12234568899999999999998  45555443221   1259999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..+...     .+++.+++.++.||+.||.|||++||+||||||+|||+    +.+ .+||+|||+++....
T Consensus       164 E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll----~~~-~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          164 EYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEE-QLKLIDLGAVSRINS  233 (681)
T ss_dssp             ECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CSS-CEEECCCTTCEETTC
T ss_pred             EeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE----eCC-cEEEEecccchhccc
Confidence            99999998876544     58889999999999999999999999999999999999    553 899999999988765


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .  ....||+.|+|||++.+
T Consensus       234 ~--~~~~gt~~y~aPE~~~~  251 (681)
T 2pzi_A          234 F--GYLYGTPGFQAPEIVRT  251 (681)
T ss_dssp             C--SCCCCCTTTSCTTHHHH
T ss_pred             C--CccCCCccccCHHHHcC
Confidence            4  55789999999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=3.3e-32  Score=223.47  Aligned_cols=161  Identities=24%  Similarity=0.296  Sum_probs=125.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++......    ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  107 (331)
T 4aaa_A           36 GSYGMVMKCRNKDTGRIVAIKKFLESDDD----KMVKKIAMREIKLLKQLRHENLV--NLLEVCK--KKKRWYLVFEFVD  107 (331)
T ss_dssp             GTTSSEEEEEETTTCCEEEEEEEESCSSC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             cCCEEEEEEEECCCCceEEEEEEecCCCc----hHHHHHHHHHHHHHhhCCCCCEe--eEEEEee--cCCEEEEEEecCC
Confidence            99999999999999999999987543211    11233567899999999999997  4555544  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   ...+++..+..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++......  .
T Consensus       108 ~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          108 HTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             EEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCTTC---------
T ss_pred             cchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE----cCCCcEEEEeCCCceeecCCccc
Confidence            9987766443   2358888899999999999999999999999999999999    78889999999999876543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       181 ~~~~~~t~~y~aPE~~~~  198 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVG  198 (331)
T ss_dssp             ---CCCCCTTCCHHHHTT
T ss_pred             cCCCcCCccccCcccccC
Confidence            345689999999999865

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=4.4e-32  Score=228.63  Aligned_cols=166  Identities=20%  Similarity=0.208  Sum_probs=118.0

Q ss_pred             CCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|++.  .+++.||+|++...        .....+.+|+.+++.++||||+  .+++++.......+++||||
T Consensus        32 G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~E~~~l~~l~hpniv--~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           32 GTYGHVYKAKRKDGKDDKDYALKQIEGT--------GISMSACREIALLRELKHPNVI--SLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             ----EEEEEEESSSSCCCCEEEEECSSS--------SCCHHHHHHHHHHHHCCCTTBC--CCCEEEEETTTTEEEEEEEC
T ss_pred             cCCeEEEEEEEccCCCCeEEEEEEECCC--------CCCHHHHHHHHHHHhcCCCCee--eEeeEEecCCCCeEEEEEeC
Confidence            999999999955  57899999998652        1223567899999999999997  45555533445568999999


Q ss_pred             eeCCCCCccCC-----CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        131 TRRSQYTGATA-----PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       131 ~~~~~l~~~~~-----~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +.++.+..+..     .......+++..++.++.||+.||.|||++||+||||||+|||+....+..+.+||+|||+|+.
T Consensus       102 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  181 (405)
T 3rgf_A          102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  181 (405)
T ss_dssp             CSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred             CCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence            98765433321     1111224888889999999999999999999999999999999966545668999999999987


Q ss_pred             cCcc-----cccceeecccCCCCccccC
Q psy11822        206 VSKA-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ....     .....+||+.|+|||++.+
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (405)
T 3rgf_A          182 FNSPLKPLADLDPVVVTFWYRAPELLLG  209 (405)
T ss_dssp             ---------------CCCTTCCHHHHTT
T ss_pred             cCCCCcccccCCCceecCcccCchhhcC
Confidence            7542     2345789999999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=4.9e-32  Score=217.44  Aligned_cols=164  Identities=19%  Similarity=0.263  Sum_probs=130.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++......    ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        17 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~~   88 (284)
T 3kk8_A           17 GAFSVVRRCVHKTTGLEFAAKIINTKKLS----ARDFQKLEREARICRKLQHPNIV--RLHDSIQ--EESFHYLVFDLVT   88 (284)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEGGGCC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             cCCeEEEEEEEcCCCceEEEEEeecccCC----HHHHHHHHHHHHHHHHcCCCCcC--eEEEEEE--cCCEEEEEEecCC
Confidence            89999999999999999999998654221    11234568899999999999997  4444443  3445789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++......   ...+++.++..++.|++.||.|||++||+||||||+||++... +..+.+||+|||++...... ..
T Consensus        89 ~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           89 GGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK-AKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSS-STTCCEEECCCTTCEECCSSCBC
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecC-CCCCcEEEeeceeeEEcccCccc
Confidence            9986554443   2458888899999999999999999999999999999999433 23346999999999877654 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       165 ~~~~~~~~y~aPE~~~~  181 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKK  181 (284)
T ss_dssp             CCSCSCGGGCCHHHHTT
T ss_pred             cCCCCCcCCcCchhhcC
Confidence            45789999999999865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=4e-32  Score=224.95  Aligned_cols=164  Identities=19%  Similarity=0.131  Sum_probs=126.1

Q ss_pred             CCceeeeeee-----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPT-----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|+     +..+++.||||+++....     ....+.+.+|+.+++.+ +||||+  .+++++... ....++
T Consensus        33 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpniv--~~~~~~~~~-~~~~~i  104 (359)
T 3vhe_A           33 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-----HSEHRALMSELKILIHIGHHLNVV--NLLGACTKP-GGPLMV  104 (359)
T ss_dssp             CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEECST-TSCCEE
T ss_pred             CCCceEEEEEeccccccccceEEEEEEecCcCC-----HHHHHHHHHHHHHHHhhcCCccee--eeeeeeecC-CCceEE
Confidence            9999999998     566789999999875311     11234678999999999 889998  455444322 234789


Q ss_pred             eeeeeeCCCCCccCCCCCC-------------------------------------------------------------
Q psy11822        127 MMEVTRRSQYTGATAPPPP-------------------------------------------------------------  145 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~-------------------------------------------------------------  145 (229)
                      ||||+++|+|..++.....                                                             
T Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (359)
T 3vhe_A          105 IVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPED  184 (359)
T ss_dssp             EEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------C
T ss_pred             EEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccc
Confidence            9999999986655443211                                                             


Q ss_pred             --CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc----cccceeeccc
Q psy11822        146 --AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRY  219 (229)
Q Consensus       146 --~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~  219 (229)
                        ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....    ......||+.
T Consensus       185 ~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~  260 (359)
T 3vhe_A          185 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK  260 (359)
T ss_dssp             TTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred             hhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE----cCCCcEEEEeccceeeecccccchhccccCCCce
Confidence              1127777788899999999999999999999999999999    77889999999999876432    2345788999


Q ss_pred             CCCCccccC
Q psy11822        220 YRAPEIILG  228 (229)
Q Consensus       220 y~aPE~l~~  228 (229)
                      |+|||++.+
T Consensus       261 y~aPE~~~~  269 (359)
T 3vhe_A          261 WMAPETIFD  269 (359)
T ss_dssp             GCCHHHHHH
T ss_pred             eEChhhhcC
Confidence            999998753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=2.2e-31  Score=212.67  Aligned_cols=160  Identities=20%  Similarity=0.277  Sum_probs=131.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        18 G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   88 (276)
T 2yex_A           18 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-----VDCPENIKKEICINKMLNHENVV--KFYGHRR--EGNIQYLFLEYCS   88 (276)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEEGGGC-----TTHHHHHHHHHHHHHTCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCcEEEEEEECCCCcEEEEEEeeeccc-----hhhhHHHHHHHHHHHhcCCCCce--eeeeEEE--cCCEEEEEEEecC
Confidence            9999999999999999999999865321     12334678899999999999997  4444443  3345789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..++..   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus        89 ~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           89 GGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             TEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             CCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE----ccCCCEEEeeCCCccccCCCcch
Confidence            9998777665   3468888899999999999999999999999999999999    77789999999999876432   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~  181 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKR  181 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTC
T ss_pred             hcccCCccccCccChHHHhc
Confidence             2345689999999999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=1.6e-32  Score=227.08  Aligned_cols=159  Identities=26%  Similarity=0.278  Sum_probs=126.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++......   .....+.+.+|+.+++.++||||+.  +++++.  .....++||||+.
T Consensus        65 G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~--~~~~~~--~~~~~~lv~e~~~  137 (348)
T 1u5q_A           65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQ---SNEKWQDIIKEVRFLQKLRHPNTIQ--YRGCYL--REHTAWLVMEYCL  137 (348)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEESCSSC---HHHHHHHHHHHHHHHHHCCCTTBCC--EEEEEE--ETTEEEEEEECCS
T ss_pred             CCCEEEEEEEEccCCeEEEEEEEcccccc---chHHHHHHHHHHHHHHhCCCCCEee--EEEEEE--ECCeEEEEEecCC
Confidence            99999999999999999999997642111   0122346789999999999999984  444443  3346799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++.++.+...   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++......  .
T Consensus       138 g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kL~DfG~a~~~~~~--~  208 (348)
T 1u5q_A          138 GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--N  208 (348)
T ss_dssp             EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSSB--C
T ss_pred             CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE----CCCCCEEEeeccCceecCCC--C
Confidence            6554433222   2358888899999999999999999999999999999999    77789999999999876543  4


Q ss_pred             ceeecccCCCCcccc
Q psy11822        213 TYLQSRYYRAPEIIL  227 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~  227 (229)
                      ...||+.|+|||++.
T Consensus       209 ~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          209 SFVGTPYWMAPEVIL  223 (348)
T ss_dssp             CCCSCGGGCCHHHHH
T ss_pred             cccCCcceeCHhhhc
Confidence            568999999999984

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2.8e-32  Score=228.22  Aligned_cols=160  Identities=26%  Similarity=0.354  Sum_probs=122.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--------------
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--------------  118 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--------------  118 (229)
                      |+||.||+|++..+|+.||+|++...          .....+|+.+++.++||||+.  +++++..              
T Consensus        18 G~fg~V~~a~~~~~~~~vAiK~~~~~----------~~~~~~E~~il~~l~hpnIv~--l~~~~~~~~~~~~~~~~~~~~   85 (383)
T 3eb0_A           18 GSFGIVCEVFDIESGKRFALKKVLQD----------PRYKNRELDIMKVLDHVNIIK--LVDYFYTTGDEEPKPPQPPDD   85 (383)
T ss_dssp             C-CEEEEEEEETTTCCEEEEEEEECC----------TTSCCHHHHHHTTCCCTTBCC--EEEEEEEC-------------
T ss_pred             ccCEEEEEEEECCCCCEEEEEEEecC----------cchHHHHHHHHHHcCCCCccc--hhheeeecCcccccccccccc
Confidence            99999999999999999999987542          123468999999999999984  4433321              


Q ss_pred             ----------------------ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccc
Q psy11822        119 ----------------------NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHA  176 (229)
Q Consensus       119 ----------------------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHr  176 (229)
                                            ......++||||++++..+.+.........+++..++.++.|++.||+|||++||+||
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~  165 (383)
T 3eb0_A           86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR  165 (383)
T ss_dssp             ------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred             cccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccC
Confidence                                  1223478999999975322221100113468888899999999999999999999999


Q ss_pred             cCCCCCeeeeCCCC-CCccEEEeecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        177 DLKPENIMLVDPVR-QPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       177 Dlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||||+|||+    + .++.+||+|||+|+..... ......||+.|+|||++.+
T Consensus       166 Dikp~Nil~----~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~  215 (383)
T 3eb0_A          166 DIKPQNLLV----NSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG  215 (383)
T ss_dssp             CCCGGGEEE----ETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTT
T ss_pred             ccCHHHEEE----cCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcC
Confidence            999999999    5 4679999999999977543 3456788999999999865

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=3.2e-32  Score=225.87  Aligned_cols=160  Identities=21%  Similarity=0.286  Sum_probs=129.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        44 G~~g~V~~~~~~~~~~~va~K~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~~  114 (360)
T 3eqc_A           44 GNGGVVFKVSHKPSGLVMARKLIHLEIK-----PAIRNQIIRELQVLHECNSPYIV--GFYGAFY--SDGEISICMEHMD  114 (360)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHGGGGGCCCTTBC--CEEEEEE--ETTEEEEEECCCT
T ss_pred             CCCeEEEEEEECCCCcEEEEEEeccccC-----HHHHHHHHHHHHHHHHCCCCCEE--EEeEEEE--ECCEEEEEEECCC
Confidence            9999999999999999999999875311     12234678999999999999997  4444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +++|..++..   ...+++..+..++.|++.||.|||+. ||+||||||+|||+    +.++.+||+|||++........
T Consensus       115 ~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  187 (360)
T 3eqc_A          115 GGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  187 (360)
T ss_dssp             TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHHHHC-
T ss_pred             CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE----CCCCCEEEEECCCCcccccccc
Confidence            9998777654   33588888899999999999999985 99999999999999    7788999999999987655445


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       188 ~~~~gt~~y~aPE~~~~  204 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQG  204 (360)
T ss_dssp             ---CCCCTTCCHHHHTT
T ss_pred             cCCCCCCCeECHHHHcC
Confidence            66789999999999875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=5.5e-32  Score=222.98  Aligned_cols=167  Identities=20%  Similarity=0.275  Sum_probs=126.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++........ .....+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        37 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv--~~~~~~~--~~~~~~lv~e~~~  111 (345)
T 3hko_A           37 GSYGVVRVAIENQTRAIRAIKIMNKNKIRQI-NPKDVERIKTEVRLMKKLHHPNIA--RLYEVYE--DEQYICLVMELCH  111 (345)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHHC----CHHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             cCCeEEEEEEECCCCceEEEeehhhhhhccc-CHHHHHHHHHHHHHHHhCCCCCcc--eeehhhc--cCCeEEEEEeCCC
Confidence            9999999999999999999999877533211 123445778999999999999997  4555544  3456799999999


Q ss_pred             CCCCCccCCCC-------------------------------------CCCCccccCCccchHHHHHHHHHHHHHCCCcc
Q psy11822        133 RSQYTGATAPP-------------------------------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH  175 (229)
Q Consensus       133 ~~~l~~~~~~~-------------------------------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiH  175 (229)
                      +++|..++...                                     .....+++..+..++.|++.||.|||+++|+|
T Consensus       112 gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH  191 (345)
T 3hko_A          112 GGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICH  191 (345)
T ss_dssp             SCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            99976554210                                     00112355566789999999999999999999


Q ss_pred             ccCCCCCeeeeCCCCCCc--cEEEeecCcceecCcc------cccceeecccCCCCccccC
Q psy11822        176 ADLKPENIMLVDPVRQPY--RVKVIDFGSASHVSKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       176 rDlkp~Nil~~~~~~~~~--~~kl~DFg~a~~~~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||||+|||+    +.++  .+||+|||+++.....      ......||+.|+|||++.+
T Consensus       192 ~Dlkp~NIll----~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          192 RDIKPENFLF----STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             CCCCGGGEEE----SCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred             cCCChhhEEE----ecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence            9999999999    5444  8999999999876431      2345789999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=1.1e-31  Score=223.24  Aligned_cols=168  Identities=22%  Similarity=0.241  Sum_probs=130.3

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc--
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN--  119 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~--  119 (229)
                      .+|.+...   |+||.||+|.+..+++.||+|++.....     ....+.+.+|+++++.++||||+  .+++++...  
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-----QTYCQRTLREIKILLRFRHENII--GINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-----HHHHHHHHHHHHHHHHCCCTTBC--CCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-----cHHHHHHHHHHHHHHhcCCCCCc--cceeEEecCCc
Confidence            34544333   9999999999999999999999864211     11234568999999999999997  444444322  


Q ss_pred             -cccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        120 -NVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       120 -~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                       .....++||||+++. +..++..    ..+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+
T Consensus       100 ~~~~~~~iv~e~~~~~-L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~  170 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETD-LYKLLKT----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKIC  170 (364)
T ss_dssp             TTCCCEEEEEECCSEE-HHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEEC
T ss_pred             cccceEEEEEcccCcC-HHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE----CCCCCEEEE
Confidence             224578999999974 3333332    358888899999999999999999999999999999999    888899999


Q ss_pred             ecCcceecCccc-----ccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKAV-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      |||+++......     ....+||+.|+|||++.+
T Consensus       171 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  205 (364)
T 3qyz_A          171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN  205 (364)
T ss_dssp             CCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHT
T ss_pred             eCcceEecCCCCCccccccccccccCCCCCHHhcC
Confidence            999998775432     245689999999998643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=8.3e-32  Score=214.72  Aligned_cols=158  Identities=16%  Similarity=0.167  Sum_probs=127.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. +++.||+|++...       ....+.+.+|+.++++++||||+  .+++++.  +....++||||++
T Consensus        21 G~~g~V~~~~~~-~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   88 (269)
T 4hcu_A           21 GQFGLVHLGYWL-NKDKVAIKTIREG-------AMSEEDFIEEAEVMMKLSHPKLV--QLYGVCL--EQAPICLVFEFME   88 (269)
T ss_dssp             CSSCEEEEEEET-TTEEEEEEEECTT-------SBCHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSEEEEEECCT
T ss_pred             CCccEEEEEEec-CCCeEEEEEeccc-------ccCHHHHHHHHHHHHhCCCCCEe--eEEEEEe--cCCceEEEEEeCC
Confidence            999999999986 5788999998753       12234578999999999999997  4454443  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..+....  ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus        89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  162 (269)
T 4hcu_A           89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQYT  162 (269)
T ss_dssp             TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE----cCCCCEEeccccccccccccccc
Confidence            99977665432  2358888889999999999999999999999999999999    77789999999999876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+|+.|+|||++.+
T Consensus       163 ~~~~~~~~~~y~aPE~~~~  181 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSF  181 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHH
T ss_pred             cccCcccccccCCHHHhcC
Confidence            2234566788999998753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=8.1e-32  Score=220.25  Aligned_cols=166  Identities=22%  Similarity=0.298  Sum_probs=126.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHH--HHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDL--LKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+++.||||++.......  .........+.+|+.+++.++||||+.  +++++..   ...++||||
T Consensus        21 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~---~~~~lv~e~   95 (322)
T 2ycf_A           21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK--IKNFFDA---EDYYIVLEL   95 (322)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCC--EEEEEES---SSEEEEEEC
T ss_pred             CCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCce--EeeEEcC---CceEEEEec
Confidence            999999999999999999999987543211  111223345789999999999999984  4444432   237999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++++...+..   ...+++.++..++.|++.||.|||++||+||||||+|||+... +..+.+||+|||++...... 
T Consensus        96 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~  171 (322)
T 2ycf_A           96 MEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-EEDCLIKITDFGHSKILGETS  171 (322)
T ss_dssp             CTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-SSSCCEEECCCTTCEECCCCH
T ss_pred             CCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecC-CCCCeEEEccCccceeccccc
Confidence            999887666554   3468888899999999999999999999999999999999432 22346999999999887654 


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      ......||+.|+|||++.
T Consensus       172 ~~~~~~gt~~y~aPE~~~  189 (322)
T 2ycf_A          172 LMRTLCGTPTYLAPEVLV  189 (322)
T ss_dssp             HHHHHHSCCTTCCHHHHH
T ss_pred             ccccccCCcCccCchhhc
Confidence            234568999999999873

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=5.9e-32  Score=219.29  Aligned_cols=162  Identities=22%  Similarity=0.293  Sum_probs=130.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.....      ..+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        20 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   89 (304)
T 2jam_A           20 GAFSEVFLVKQRLTGKLFALKCIKKSPAF------RDSSLENEIAVLKKIKHENIV--TLEDIYE--STTHYYLVMQLVS   89 (304)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEECC------------HHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCceEEEEEECCCCCEEEEEEEeccccc------chHHHHHHHHHHHhCCCCCee--ehhhhcc--cCCEEEEEEEcCC
Confidence            99999999999999999999998753211      123568899999999999997  4444443  3446799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      ++++...+..   ...+++.++..++.|++.||.|||++||+||||||+||++... +..+.+||+|||++.........
T Consensus        90 ~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           90 GGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP-EENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             SCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS-STTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC-CCCCCEEEccCCcceecCCCccc
Confidence            9997655443   2358888899999999999999999999999999999999543 45679999999999876655555


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...||+.|+|||++.+
T Consensus       166 ~~~~~~~y~aPE~~~~  181 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQ  181 (304)
T ss_dssp             HHHSCCCBCCTTTBSS
T ss_pred             cccCCCCccChHHhcc
Confidence            6789999999999865

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=4.1e-32  Score=225.95  Aligned_cols=164  Identities=19%  Similarity=0.212  Sum_probs=131.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHH--HHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFI--DLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+|+.||||++.....  .........+.+.+|+.+++.+ +||||+.  +++++.  .....++|||
T Consensus       105 G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~--~~~~~~--~~~~~~lv~e  180 (365)
T 2y7j_A          105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT--LIDSYE--SSSFMFLVFD  180 (365)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC--EEEEEE--BSSEEEEEEC
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE--EEEEEe--eCCEEEEEEE
Confidence            8999999999988999999998764210  0011122244678999999999 8999974  444443  3345799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++..+...   ...+++..+..++.|++.||.|||+.||+||||||+|||+    +.++.+||+|||++..+...
T Consensus       181 ~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~----~~~~~ikl~DfG~~~~~~~~  253 (365)
T 2y7j_A          181 LMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL----DDNMQIRLSDFGFSCHLEPG  253 (365)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTT
T ss_pred             eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----CCCCCEEEEecCcccccCCC
Confidence            9999997666553   2358888899999999999999999999999999999999    88889999999999887653


Q ss_pred             -cccceeecccCCCCcccc
Q psy11822        210 -VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~  227 (229)
                       .....+||+.|+|||++.
T Consensus       254 ~~~~~~~gt~~y~aPE~~~  272 (365)
T 2y7j_A          254 EKLRELCGTPGYLAPEILK  272 (365)
T ss_dssp             CCBCCCCSCGGGCCHHHHH
T ss_pred             cccccCCCCCCccChhhcc
Confidence             445678999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=1.1e-31  Score=219.95  Aligned_cols=160  Identities=19%  Similarity=0.209  Sum_probs=124.9

Q ss_pred             CCceeeeeeecCCCCcE----EEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGEL----LAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++..+++.    ||+|.+....     .......+.+|+.+++.++||||+  .+++++.   ....++||
T Consensus        24 G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~---~~~~~~v~   93 (325)
T 3kex_A           24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-----GRQSFQAVTDHMLAIGSLDHAHIV--RLLGLCP---GSSLQLVT   93 (325)
T ss_dssp             CSSCEEEEEEECCTTCSCCEEEEEEEECCTT-----SCSCBCSCCHHHHHHHTCCCTTBC--CEEEEEC---BSSEEEEE
T ss_pred             cCCceEEEEEEcCCCceEEEEEEEEeccccc-----cHHHHHHHHHHHHHHhcCCCCCcC--eEEEEEc---CCccEEEE
Confidence            99999999999888775    7777664321     122345678899999999999997  4454443   33478999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++++++...+...  ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus        94 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~  167 (325)
T 3kex_A           94 QYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL----KSPSQVQVADFGVADLLPP  167 (325)
T ss_dssp             ECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE----SSSSCEEECSCSGGGGSCC
T ss_pred             EeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE----CCCCeEEECCCCcccccCc
Confidence            999999976665442  2468889999999999999999999999999999999999    7788999999999987754


Q ss_pred             c----cccceeecccCCCCccccC
Q psy11822        209 A----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .    ......||+.|+|||++.+
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~  191 (325)
T 3kex_A          168 DDKQLLYSEAKTPIKWMALESIHF  191 (325)
T ss_dssp             CTTCCC-----CCTTTSCHHHHHH
T ss_pred             ccccccccCCCCcccccChHHhcc
Confidence            3    2245677889999999753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=1.4e-31  Score=224.11  Aligned_cols=160  Identities=26%  Similarity=0.294  Sum_probs=125.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc--------Cccccceehhhhhh--ccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN--------HAFVTLAHLVDYAH--CNNVK  122 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------h~ni~~~~~~~~~~--~~~~~  122 (229)
                      |+||.||+|++..+++.||+|+++...       ...+.+.+|+.+++.++        |+||+  .+++.+.  ..+..
T Consensus        48 G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv--~~~~~~~~~~~~~~  118 (397)
T 1wak_A           48 GHFSTVWLSWDIQGKKFVAMKVVKSAE-------HYTETALDEIRLLKSVRNSDPNDPNREMVV--QLLDDFKISGVNGT  118 (397)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSCH-------HHHHHHHHHHHHHHHHHHSCTTCGGGGGBC--CEEEEEEEEETTEE
T ss_pred             cCCeeEEEEEecCCCeEEEEEEEecCC-------cchHHHHHHHHHHHHHhhcCCCCCCcceee--eeecceeecCCCCc
Confidence            999999999999999999999987531       12335578999998885        67776  3444333  12345


Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCc--------
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPY--------  193 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~--------  193 (229)
                      ..++||||+.++++..+....  ...+++.+++.++.||+.||.|||++ ||+||||||+|||+    +.++        
T Consensus       119 ~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll----~~~~~~~~~~~~  192 (397)
T 1wak_A          119 HICMVFEVLGHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL----SVNEQYIRRLAA  192 (397)
T ss_dssp             EEEEEECCCCCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEE----CCCHHHHHHHHH
T ss_pred             eEEEEEeccCccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeE----eccchhhhhhhh
Confidence            689999999766666554431  23588889999999999999999998 99999999999999    4433        


Q ss_pred             -----------------------------------------cEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        194 -----------------------------------------RVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 -----------------------------------------~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                                                               .+||+|||+|...... .....||+.|+|||++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-SCSCCSCGGGCCHHHHHT
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-CccCCCCCcccCChhhcC
Confidence                                                     7999999999877654 355689999999999865

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=1.5e-31  Score=221.71  Aligned_cols=162  Identities=23%  Similarity=0.277  Sum_probs=123.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-----Cccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-----HAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++..+++.||+|+++....       ....+.+|+.+++.+.     ||||+  .+++++..  ....++|
T Consensus        46 G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~h~~iv--~~~~~~~~--~~~~~lv  114 (360)
T 3llt_A           46 GTFGRVLLCQHIDNKKYYAVKVVRNIKK-------YTRSAKIEADILKKIQNDDINNNNIV--KYHGKFMY--YDHMCLI  114 (360)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECSCHH-------HHHHHHHHHHHHHHTCCCSTTGGGBC--CEEEEEEE--TTEEEEE
T ss_pred             cCCeEEEEEEECCCCeEEEEEEeccchh-------hhhhhHHHHHHHHHhcccCCCCCCee--cccceeeE--CCeeEEE
Confidence            9999999999999999999999864211       1123355666776665     99997  44444432  3457999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC------------------
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV------------------  189 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~------------------  189 (229)
                      |||+ +++|..++.... ...+++.++..++.|++.||+|||++||+||||||+|||+..+.                  
T Consensus       115 ~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T 3llt_A          115 FEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ  192 (360)
T ss_dssp             ECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred             EcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence            9999 777655544321 22488888999999999999999999999999999999994311                  


Q ss_pred             ---CCCccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        190 ---RQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       190 ---~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                         ...+.+||+|||+|+..... .....||+.|+|||++.+
T Consensus       193 ~~~~~~~~~kl~DFG~a~~~~~~-~~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          193 IYRTKSTGIKLIDFGCATFKSDY-HGSIINTRQYRAPEVILN  233 (360)
T ss_dssp             EEEESCCCEEECCCTTCEETTSC-CCSCCSCGGGCCHHHHTT
T ss_pred             ccccCCCCEEEEeccCceecCCC-CcCccCcccccCcHHHcC
Confidence               12679999999999876543 356789999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.5e-32  Score=225.60  Aligned_cols=163  Identities=20%  Similarity=0.245  Sum_probs=129.3

Q ss_pred             CCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++.   .+++.||||+++.....  ......+.+.+|+.+++.+ .||||+.  +.+++.  .....++||
T Consensus        65 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~--~~~~~~--~~~~~~lv~  138 (355)
T 1vzo_A           65 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIV--QKAKTTEHTRTERQVLEHIRQSPFLVT--LHYAFQ--TETKLHLIL  138 (355)
T ss_dssp             TTTEEEEEEEECSSTTTTCEEEEEEESEEEEE--EEESSGGGCCCHHHHHHHHHTCTTBCC--EEEEEE--ETTEEEEEE
T ss_pred             CCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh--hhhhHHHHHHHHHHHHHHccCCCceeE--EEEEEe--eCceEEEEe
Confidence            999999999874   58999999998652100  0112345678899999999 6999974  333333  334579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       139 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          139 DYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             CCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCG
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----CCCCcEEEeeCCCCeeccc
Confidence            99999997666554   2358888899999999999999999999999999999999    8888999999999987644


Q ss_pred             c---cccceeecccCCCCccccC
Q psy11822        209 A---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      .   .....+||+.|+|||++.+
T Consensus       212 ~~~~~~~~~~gt~~y~aPE~~~~  234 (355)
T 1vzo_A          212 DETERAYDFCGTIEYMAPDIVRG  234 (355)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             CCCCcccCcccCcCccChhhhcC
Confidence            3   2345689999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=2.1e-32  Score=228.49  Aligned_cols=166  Identities=19%  Similarity=0.155  Sum_probs=119.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccc---cccccccCccccceehh-----hhhhccc----
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRI---TPGEALNHAFVTLAHLV-----DYAHCNN----  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei---~~l~~l~h~ni~~~~~~-----~~~~~~~----  120 (229)
                      |+||.||+|++..+|+.||||++.....   ......+.+.+|+   +.++.++||||+.+...     +++...+    
T Consensus        84 G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~  160 (377)
T 3byv_A           84 EDPYAYLEATDQETGESFEVHVPYFTER---PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKM  160 (377)
T ss_dssp             ETTEEEEEEEC-CCCCEEEEEEEEECC----CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSE
T ss_pred             CCCEEEEEEEECCCCcEEEEEEEeeccc---cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccc
Confidence            8999999999999999999999864211   1122334667888   67777799999732210     2221110    


Q ss_pred             ------c-----cccceeeeeeeCCCCCccCCCCC----CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeee
Q psy11822        121 ------V-----KASVQMMEVTRRSQYTGATAPPP----PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIML  185 (229)
Q Consensus       121 ------~-----~~~~lv~e~~~~~~l~~~~~~~~----~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~  185 (229)
                            .     ...|+||||++ |+|..++....    ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus       161 ~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll  239 (377)
T 3byv_A          161 IRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL  239 (377)
T ss_dssp             EEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             cccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence                  0     03689999994 57555544310    01223446677899999999999999999999999999999


Q ss_pred             eCCCCCCccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        186 VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       186 ~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                          +.++.+||+|||+|+.... .....+| +.|+|||++.+
T Consensus       240 ----~~~~~~kL~DFG~a~~~~~-~~~~~~g-~~y~aPE~~~~  276 (377)
T 3byv_A          240 ----DQRGGVFLTGFEHLVRDGA-RVVSSVS-RGFEPPELEAR  276 (377)
T ss_dssp             ----CTTCCEEECCGGGCEETTC-EEECCCC-TTCCCHHHHHH
T ss_pred             ----cCCCCEEEEechhheecCC-cccCCCC-cCccChhhhcc
Confidence                7788999999999987544 3356678 99999999753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=1.9e-31  Score=216.65  Aligned_cols=167  Identities=25%  Similarity=0.238  Sum_probs=123.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhhccc---ccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAHCNN---VKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~~~~---~~~~~l  126 (229)
                      |+||.||+|++..+++.||+|+++...... ........+.+|+.+++.+   .||||+  .+++++....   ....++
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~h~niv--~~~~~~~~~~~~~~~~~~l   96 (308)
T 3g33_A           20 GAYGTVYKARDPHSGHFVALKSVRVPNGGG-GGGGLPISTVREVALLRRLEAFEHPNVV--RLMDVCATSRTDREIKVTL   96 (308)
T ss_dssp             SSSCCEEEEECTTTCCEEEEEEEEEECCCT-TSSCCCHHHHHHHHHHHHHHHHCCTTBC--CEEEEEEECCSSSEEEEEE
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEecccccc-cccccchhHHHHHHHHHHHhhcCCCCeE--EeeeeeeccCCCCceeEEE
Confidence            999999999999999999999986421000 0001112345666666665   499998  4444443322   224789


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||+++ ++..++.... ...+++.++..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+++..
T Consensus        97 v~e~~~~-~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~  170 (308)
T 3g33_A           97 VFEHVDQ-DLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV----TSGGTVKLADFGLARIY  170 (308)
T ss_dssp             EEECCCC-BHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE----CTTSCEEECSCSCTTTS
T ss_pred             Eehhhhc-CHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE----cCCCCEEEeeCcccccc
Confidence            9999986 5444433321 1248888999999999999999999999999999999999    77889999999999877


Q ss_pred             Ccc-cccceeecccCCCCccccC
Q psy11822        207 SKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... ......||+.|+|||++.+
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~  193 (308)
T 3g33_A          171 SYQMALTPVVVTLWYRAPEVLLQ  193 (308)
T ss_dssp             TTCCCSGGGGCCCSSCCHHHHHT
T ss_pred             CCCcccCCccccccccCchHHcC
Confidence            543 3456789999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=215.57  Aligned_cols=166  Identities=22%  Similarity=0.220  Sum_probs=130.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|+++......  .....+.+.+|+.+++.++||||+  .+++++...+....++||||++
T Consensus        16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~~~~~~~~~lv~e~~~   91 (305)
T 2wtk_C           16 GSYGKVKEVLDSETLCRRAVKILKKKKLRR--IPNGEANVKKEIQLLRRLRHKNVI--QLVDVLYNEEKQKMYMVMEYCV   91 (305)
T ss_dssp             CSSCEEEEEEBTTTCCEEEEEEECHHHHHH--STTHHHHHHHHHHHHTTCCCTTBC--CEEEEEECC---CEEEEEECCS
T ss_pred             CCCeEEEEEEECCCCcEEEEEEeccccccc--cchhHHHHHHHHHHHHhcCCCCee--EEEEEEEcCCCCeEEEEehhcc
Confidence            999999999999999999999988753321  123345678999999999999997  4555443334456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++....+...  ....+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus        92 ~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~----~~~~~~kl~dfg~~~~~~~~~~~  165 (305)
T 2wtk_C           92 CGMQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL----TTGGTLKISALGVAEALHPFAAD  165 (305)
T ss_dssp             EEHHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCTTCSS
T ss_pred             CCHHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE----cCCCcEEeeccccccccCccccc
Confidence            8843222211  12358888899999999999999999999999999999999    77889999999999876432   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       ......||+.|+|||++.+
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          166 DTCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             CEECCCCSCGGGCCHHHHTC
T ss_pred             cccccCCCCCCCcChhhccC
Confidence             2345679999999999865

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=1.3e-31  Score=223.55  Aligned_cols=161  Identities=14%  Similarity=0.121  Sum_probs=117.7

Q ss_pred             CCceeeeeeecC---CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDL---EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++.   .++..||||+++....     ....+.+.+|+.+++.++||||+  .+++++.  .....++|||
T Consensus        56 G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~--~~~~~~lv~e  126 (373)
T 2qol_A           56 GEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-----EKQRRDFLGEASIMGQFDHPNII--RLEGVVT--KSKPVMIVTE  126 (373)
T ss_dssp             CSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--SSSSCEEEEE
T ss_pred             CCCeEEEEEEEecCCCCceeEEEEEecCccC-----HHHHHHHHHHHHHHHhCCCCCCC--eEEEEEe--eCCceEEEEe
Confidence            999999999876   4678899999875321     12234678999999999999998  4444443  3456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus       127 ~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          127 YMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             CCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC---------
T ss_pred             CCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----cCCCCEEECcCccccccccC
Confidence            99999987776542  2358888889999999999999999999999999999999    88889999999999877543


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+|+.|+|||++.+
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~  224 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAY  224 (373)
T ss_dssp             -------------CTTSCHHHHHH
T ss_pred             CccceeccCCCcCCCccChhhhcc
Confidence            1     122345678999998753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=222.72  Aligned_cols=163  Identities=16%  Similarity=0.186  Sum_probs=128.4

Q ss_pred             CCceeeeeeecCC-------CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLE-------GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++..       ++..||+|+++....     ......+.+|+++++.+ +||||+  .+++++.  .....
T Consensus        80 G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hpnIv--~~~~~~~--~~~~~  150 (382)
T 3tt0_A           80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-----EKDLSDLISEMEMMKMIGKHKNII--NLLGACT--QDGPL  150 (382)
T ss_dssp             CSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSC
T ss_pred             CCCeEEEEEEEccccccccccceEEEEEeeccccC-----HHHHHHHHHHHHHHHHhcCCchhh--hheeeec--cCCce
Confidence            9999999998643       346899999875321     12234678999999999 999998  4555443  34557


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      ++||||+++++|..++....             ....+++.+++.++.|++.||.|||++||+||||||+|||+    +.
T Consensus       151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~  226 (382)
T 3tt0_A          151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TE  226 (382)
T ss_dssp             EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CT
T ss_pred             EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE----cC
Confidence            99999999999766554321             12358888899999999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+|+.....    ......||+.|+|||++.+
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  267 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  267 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC
Confidence            889999999999877542    2345677889999999865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=9.7e-32  Score=218.55  Aligned_cols=163  Identities=17%  Similarity=0.187  Sum_probs=127.3

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++     ..++..||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.  .....++|
T Consensus        34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv  104 (314)
T 2ivs_A           34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-----PSELRDLLSEFNVLKQVNHPHVI--KLYGACS--QDGPLLLI  104 (314)
T ss_dssp             CSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             cCCeeEEEEEEeccCcccCcceEEEEeccCCCC-----HHHHHHHHHHHHHHhhCCCCcee--eEEEEEe--cCCceEEE
Confidence            99999999987     34568999999875321     12234678999999999999997  4444443  34457999


Q ss_pred             eeeeeCCCCCccCCCCCC---------------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeee
Q psy11822        128 MEVTRRSQYTGATAPPPP---------------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLV  186 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~  186 (229)
                      |||+++++|..++.....                     ...+++.++..++.|++.||.|||++||+||||||+||++ 
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli-  183 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-  183 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEE-
Confidence            999999997666543211                     2347778889999999999999999999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                         +.++.+||+|||+++.....    ......+|+.|+|||++.+
T Consensus       184 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  226 (314)
T 2ivs_A          184 ---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD  226 (314)
T ss_dssp             ---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH
T ss_pred             ---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC
Confidence               77789999999999877443    2234567888999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=4.7e-32  Score=223.10  Aligned_cols=163  Identities=18%  Similarity=0.158  Sum_probs=127.4

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .+++.||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.  .....++|
T Consensus        58 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv  128 (343)
T 1luf_A           58 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-----ADMQADFQREAALMAEFDNPNIV--KLLGVCA--VGKPMCLL  128 (343)
T ss_dssp             CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-----HHHHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             cCCeeEEEEEecCcCCCCCceeEEEEEeccccC-----HHHHHHHHHHHHHHHhCCCCCEE--EEEEEEc--cCCceEEE
Confidence            999999999986     4568999999875321     12334678999999999999997  4454443  34567999


Q ss_pred             eeeeeCCCCCccCCCCCC---------------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeee
Q psy11822        128 MEVTRRSQYTGATAPPPP---------------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLV  186 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~---------------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~  186 (229)
                      |||+++++|..++....+                     ...+++.+++.++.|++.||.|||++||+||||||+|||+ 
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~-  207 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-  207 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE-
Confidence            999999997665443211                     1457888889999999999999999999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                         +.++.+||+|||+++.....    ......||+.|+|||++.+
T Consensus       208 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          208 ---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             ---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             ---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence               88889999999999876432    2235678899999998753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=2.1e-31  Score=214.18  Aligned_cols=166  Identities=19%  Similarity=0.185  Sum_probs=126.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHH-HHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDL-LKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||+|++....... .......+.+.+|+.+++.++||||+  .+++++...    .++||||+
T Consensus        30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~~~----~~lv~e~~  103 (287)
T 4f0f_A           30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV--KLYGLMHNP----PRMVMEFV  103 (287)
T ss_dssp             CSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBC--CEEEEETTT----TEEEEECC
T ss_pred             CCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCch--hhheeecCC----CeEEEEec
Confidence            999999999999999999999875421110 11112235678999999999999997  444444322    26999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCC-CCCccEEEeecCcceecCc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~~~~~  208 (229)
                      +++++.......  ...+++..+..++.|++.||.|||++|  |+||||||+|||+.... +....+||+|||+++....
T Consensus       104 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~  181 (287)
T 4f0f_A          104 PCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH  181 (287)
T ss_dssp             TTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS
T ss_pred             CCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc
Confidence            999864443321  235888889999999999999999999  99999999999994322 1122399999999986554


Q ss_pred             ccccceeecccCCCCcccc
Q psy11822        209 AVCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~  227 (229)
                      . .....||+.|+|||++.
T Consensus       182 ~-~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          182 S-VSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             C-EECCCCCCTTSCGGGSS
T ss_pred             c-ccccCCCccccCchhhc
Confidence            3 35578999999999984

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=2.8e-32  Score=218.74  Aligned_cols=169  Identities=24%  Similarity=0.294  Sum_probs=129.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.............+.+.+|+.+++.++||||+.  +++++.  +....++||||++
T Consensus        16 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   91 (283)
T 3bhy_A           16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT--LHDIFE--NKTDVVLILELVS   91 (283)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCC--EEEEEE--CSSEEEEEEECCC
T ss_pred             cCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeee--hhheec--CCCeEEEEEeecC
Confidence            999999999999999999999876532111111113456789999999999999974  444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++..++..   ...+++.++..++.|++.||.|||++||+||||||+||++.........+||+|||++...... ..
T Consensus        92 ~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~  168 (283)
T 3bhy_A           92 GGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF  168 (283)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc
Confidence            9997776544   2458888999999999999999999999999999999999443223348999999999877543 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       169 ~~~~~~~~y~aPE~~~~  185 (283)
T 3bhy_A          169 KNIFGTPEFVAPEIVNY  185 (283)
T ss_dssp             ---CCCGGGCCHHHHTT
T ss_pred             cccCCCcCccCcceecC
Confidence            45679999999999865

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=1.4e-31  Score=221.08  Aligned_cols=166  Identities=11%  Similarity=0.111  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCC---CCcEEEEehhhHHHHHHHHH-----hhhhhhhhccccccccccCccccceehhhhhhc--cccc
Q psy11822         53 DDIGQVNVPTDLE---GGELLAEKADRREFIDLLKR-----MLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--NNVK  122 (229)
Q Consensus        53 g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~-----~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~~~  122 (229)
                      |+||.||+|.+..   ++..+|+|++.........+     ......+.+|+..++.++||||+.  +++++..  ....
T Consensus        48 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~--~~~~~~~~~~~~~  125 (345)
T 2v62_A           48 GGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL--FYGSGLTEFKGRS  125 (345)
T ss_dssp             ----CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC--EEEEEEEESSSCE
T ss_pred             cCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce--eecccccccCCCc
Confidence            8999999999987   78899999876532111111     112234678888999999999984  4444332  2245


Q ss_pred             ccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc--cEEEeec
Q psy11822        123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY--RVKVIDF  200 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~--~~kl~DF  200 (229)
                      ..++||||+ +++|..++..   ...+++.+++.++.|++.||+|||++||+||||||+|||+    +.++  .+||+||
T Consensus       126 ~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~~~~~~~kL~Df  197 (345)
T 2v62_A          126 YRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL----GYKNPDQVYLADY  197 (345)
T ss_dssp             EEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----ESSSTTSEEECCC
T ss_pred             EEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEE----ccCCCCcEEEEeC
Confidence            689999999 8887777665   2368889999999999999999999999999999999999    4444  9999999


Q ss_pred             CcceecCcc---------cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA---------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~---------~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|+.+...         ......||+.|+|||++.+
T Consensus       198 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  234 (345)
T 2v62_A          198 GLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG  234 (345)
T ss_dssp             TTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT
T ss_pred             CCceecccccccccchhccccccCCCccccCHHHhcC
Confidence            999876432         1245689999999999865

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.2e-31  Score=218.11  Aligned_cols=162  Identities=20%  Similarity=0.237  Sum_probs=124.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++......   .....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        45 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~e~~~l~~l~hp~iv--~~~~~~~--~~~~~~lv~e~~~  117 (309)
T 2h34_A           45 GGMGDVYEAEDTVRERIVALKLMSETLSS---DPVFRTRMQREARTAGRLQEPHVV--PIHDFGE--IDGQLYVDMRLIN  117 (309)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEECGGGGGG---SHHHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCC
T ss_pred             CCCeeEEEEEEcCCCeEEEEEecCccccc---CHHHHHHHHHHHHHHhhcCCCCee--EEEEEEe--eCCeEEEEEEecC
Confidence            99999999999999999999998764221   112235678999999999999997  4444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +++|..++..   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus       118 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          118 GVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV----SADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSCCC----------
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE----cCCCCEEEecCccCccccccccc
Confidence            9997776554   2358888899999999999999999999999999999999    77789999999999876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       191 ~~~~~~~~~~y~aPE~~~~  209 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSE  209 (309)
T ss_dssp             ------CCGGGCCGGGTCC
T ss_pred             cccccCCCcCccCHHHHcC
Confidence            2345689999999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=9.9e-31  Score=215.68  Aligned_cols=165  Identities=13%  Similarity=0.165  Sum_probs=133.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHh-----------hhhhhhhccccccccccCccccceehhhhhhcccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRM-----------LTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV  121 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~-----------~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~  121 (229)
                      |+||.||+|.+  +|+.||+|++...........           ...+.+.+|+.+++.++||||+  .+++++.  +.
T Consensus        42 G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~  115 (348)
T 2pml_X           42 GKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL--TCEGIIT--NY  115 (348)
T ss_dssp             CSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC--CCSEEEE--SS
T ss_pred             CCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc--eEEEEEe--eC
Confidence            99999999998  899999999887532110000           0015778999999999999997  4555544  33


Q ss_pred             cccceeeeeeeCCCCCcc------CCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCcc
Q psy11822        122 KASVQMMEVTRRSQYTGA------TAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYR  194 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~------~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~  194 (229)
                      ...++||||+++++|..+      ..... ...+++..+..++.|++.||.|||+ +||+||||||+||++    +.++.
T Consensus       116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~----~~~~~  190 (348)
T 2pml_X          116 DEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM----DKNGR  190 (348)
T ss_dssp             SEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE----CTTSC
T ss_pred             CeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE----cCCCc
Confidence            467999999999998776      33311 3468888899999999999999999 999999999999999    78889


Q ss_pred             EEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||++............||+.|+|||++.+
T Consensus       191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  224 (348)
T 2pml_X          191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSN  224 (348)
T ss_dssp             EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSS
T ss_pred             EEEeccccccccccccccCCCCCcCccCchhhcC
Confidence            9999999999876666667889999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.96  E-value=1.7e-31  Score=230.48  Aligned_cols=160  Identities=15%  Similarity=0.119  Sum_probs=130.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||||.++..       ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus       231 G~fg~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~hpniv--~l~~~~~--~~~~~~lv~E~~~  299 (495)
T 1opk_A          231 GQYGEVYEGVWKKYSLTVAVKTLKED-------TMEVEEFLKEAAVMKEIKHPNLV--QLLGVCT--REPPFYIITEFMT  299 (495)
T ss_dssp             GTTSSEEEEEEGGGTEEEEEEECCSS-------SSCHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEEEECCT
T ss_pred             CCCeEEEEEEEcCCCeEEEEEEecCc-------ccchHHHHHHHHHHHhcCCCCEe--eEEEEEe--cCCcEEEEEEccC
Confidence            99999999999988999999998753       22345678999999999999998  4454443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +|+|..++.... ...+++..+..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++......  
T Consensus       300 ~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          300 YGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV----GENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             TCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEEECCTTCEECCTTCCEE
T ss_pred             CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE----CCCCcEEEeecccceeccCCcee
Confidence            999776654321 2347778888999999999999999999999999999999    788899999999999875432  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+++.|+|||++.+
T Consensus       375 ~~~~~~~~~~y~aPE~~~~  393 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAY  393 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHH
T ss_pred             ecCCCcCCcceeCHhHHhc
Confidence             234556788999998753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=1.5e-31  Score=213.21  Aligned_cols=164  Identities=22%  Similarity=0.243  Sum_probs=117.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.  +..||+|+++......  .....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        18 G~~g~V~~~~~~--~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   89 (271)
T 3dtc_A           18 GGFGKVYRAFWI--GDEVAVKAARHDPDED--ISQTIENVRQEAKLFAMLKHPNII--ALRGVCL--KEPNLCLVMEFAR   89 (271)
T ss_dssp             ETTEEEEEEEET--TEEEEEEEC------------CHHHHHHHHHHHHHCCCTTBC--CEEEEEC--CC--CEEEEECCT
T ss_pred             CCCeEEEEEEEc--CCeEEEEEEecCCccc--HHHHHHHHHHHHHHHHhcCCCCEe--eEEEEEe--cCCceEEEEEcCC
Confidence            999999999975  8999999987643221  122345678999999999999997  4454443  3445799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC---CccccCCCCCeeeeCCCC----CCccEEEeecCccee
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG---LIHADLKPENIMLVDPVR----QPYRVKVIDFGSASH  205 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~---iiHrDlkp~Nil~~~~~~----~~~~~kl~DFg~a~~  205 (229)
                      ++++..+...    ..+++..+..++.|++.||.|||++|   |+||||||+||++.....    ..+.+||+|||++..
T Consensus        90 ~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A           90 GGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             TEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             CCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence            9998777654    46888889999999999999999999   899999999999944211    267899999999988


Q ss_pred             cCcccccceeecccCCCCccccC
Q psy11822        206 VSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..........||+.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~  188 (271)
T 3dtc_A          166 WHRTTKMSAAGAYAWMAPEVIRA  188 (271)
T ss_dssp             ----------CCGGGSCHHHHHH
T ss_pred             cccccccCCCCccceeCHHHhcc
Confidence            76665556789999999998753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=2e-31  Score=215.23  Aligned_cols=161  Identities=22%  Similarity=0.233  Sum_probs=123.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh-----------cccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH-----------CNNV  121 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~-----------~~~~  121 (229)
                      |+||.||+|++..+|+.||+|+++...       ...+.+.+|+.+++.++||||+.  +++++.           ....
T Consensus        17 G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~~~~~~~~   87 (303)
T 1zy4_A           17 GAFGQVVKARNALDSRYYAIKKIRHTE-------EKLSTILSEVMLLASLNHQYVVR--YYAAWLERRNFVKPMTAVKKK   87 (303)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEEEH-------HHHHHHHHHHHHHTTCCCTTBCC--EEEEEEECCCCCC------CE
T ss_pred             CCcEEEEEEEEcCCCeEEEEEEEeccH-------HHHHHHHHHHHHHHhcCchHHHH--HHHHHHhhcchhhhhcccccC
Confidence            999999999999999999999986531       12346688999999999999984  333221           1224


Q ss_pred             cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      ...++||||+++++|..++...  ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~----~~~~~~kl~dfg  161 (303)
T 1zy4_A           88 STLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI----DESRNVKIGDFG  161 (303)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCCC
T ss_pred             CceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE----cCCCCEEEeeCc
Confidence            5679999999999977765531  2346777788999999999999999999999999999999    788899999999


Q ss_pred             cceecCcc----------------cccceeecccCCCCccccC
Q psy11822        202 SASHVSKA----------------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~----------------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++......                ......||+.|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  204 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG  204 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTS
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccC
Confidence            99876421                2245679999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=6.5e-32  Score=221.23  Aligned_cols=162  Identities=19%  Similarity=0.156  Sum_probs=129.7

Q ss_pred             CCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|+    +..+++.||+|++.....      ...+.+.+|+.+++.++||||+.  +++++...+....++||
T Consensus        34 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~~~~~~~~~lv~  105 (327)
T 3lxl_A           34 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGP------DQQRDFQREIQILKALHSDFIVK--YRGVSYGPGRQSLRLVM  105 (327)
T ss_dssp             ETTEEEEEEEECTTSSSCSEEEEEEEESSCCH------HHHHHHHHHHHHHHTCCCTTBCC--EEEEEECSSSCEEEEEE
T ss_pred             CCCeEEEEEEeccCCCCcceEEEEEEeccCCH------HHHHHHHHHHHHHHhcCCCceeE--EEEEEecCCCceEEEEE
Confidence            9999999998    567899999999875321      12345689999999999999984  44444333445678999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||++.....
T Consensus       106 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          106 EYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             ECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCGGGCEECCT
T ss_pred             eecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE----CCCCCEEEcccccceeccc
Confidence            999999977665431  1248888899999999999999999999999999999999    7778999999999987754


Q ss_pred             c-----cccceeecccCCCCccccC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .     ......||+.|+|||++.+
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~  204 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSD  204 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHH
T ss_pred             CCccceeeccCCccccccCHHHhcc
Confidence            3     2234568888999998754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=9.9e-32  Score=216.07  Aligned_cols=160  Identities=16%  Similarity=0.124  Sum_probs=130.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..++..||+|++...       ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        24 G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~~v~e~~~   92 (288)
T 3kfa_A           24 GQYGEVYEGVWKKYSLTVAVKTLKED-------TMEVEEFLKEAAVMKEIKHPNLV--QLLGVCT--REPPFYIITEFMT   92 (288)
T ss_dssp             GTTCSEEEEEEGGGTEEEEEEEECSC-------STHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSEEEEEECCT
T ss_pred             CCceeEEEeEecCCCEEEEEEecCcC-------HHHHHHHHHHHHHHHhCCCCCEe--eEEEEEc--cCCCEEEEEEcCC
Confidence            99999999999999999999998753       22344668899999999999997  4554443  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..++.... ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus        93 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           93 YGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             TEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE----CGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE----cCCCCEEEccCccceeccCCccc
Confidence            998766654322 2358888889999999999999999999999999999999    77889999999999877543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+|+.|+|||++.+
T Consensus       168 ~~~~~~~~~~y~aPE~~~~  186 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLAY  186 (288)
T ss_dssp             EETTEEECGGGCCHHHHHH
T ss_pred             cccCCccccCcCChhhhcc
Confidence            2345677889999998753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.8e-31  Score=219.93  Aligned_cols=163  Identities=17%  Similarity=0.120  Sum_probs=125.7

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++     ..++..||+|+++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....++
T Consensus        56 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv--~~~~~~~--~~~~~~l  126 (344)
T 1rjb_A           56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-----SSEREALMSELKMMTQLGSHENIV--NLLGACT--LSGPIYL  126 (344)
T ss_dssp             CSSEEEEEEEEESCSSSSCEEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEE
T ss_pred             CCCceeEEeeeeccccCCcceEEEEEecccccC-----HHHHHHHHHHHHHHHhhcCCCCee--eEEEEEe--eCCccEE
Confidence            99999999996     34677999999875321     22345678999999999 999997  4454443  3345799


Q ss_pred             eeeeeeCCCCCccCCCCCC--------------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeee
Q psy11822        127 MMEVTRRSQYTGATAPPPP--------------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLV  186 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~--------------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~  186 (229)
                      ||||+++++|..++.....                    ...+++.+++.++.|++.||.|||++||+||||||+|||+ 
T Consensus       127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll-  205 (344)
T 1rjb_A          127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-  205 (344)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE-
T ss_pred             EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE-
Confidence            9999999997666544221                    1236777888999999999999999999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                         +.++.+||+|||++......    ......||+.|+|||++.+
T Consensus       206 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  248 (344)
T 1rjb_A          206 ---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  248 (344)
T ss_dssp             ---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             ---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc
Confidence               77789999999999876443    2345678889999998753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=4.2e-31  Score=218.67  Aligned_cols=159  Identities=25%  Similarity=0.361  Sum_probs=123.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc----cccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV----KASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~----~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||||++......    ....+.+.+|+.+++.++||||+  .+++++.....    ...++||
T Consensus        35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~~lv~  108 (353)
T 3coi_A           35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQS----EIFAKRAYRELLLLKHMQHENVI--GLLDVFTPASSLRNFYDFYLVM  108 (353)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEESSTTSS----HHHHHHHHHHHHHHHHCCCTTBC--CCSEEECSCSSGGGCCCCEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEecccccc----hHHHHHHHHHHHHHHhcCCCCcc--cHhheEecccccccceeEEEEe
Confidence            99999999999999999999998653211    12234568899999999999997  44444433221    2358999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++ ++......     .+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++....
T Consensus       109 e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~~  178 (353)
T 3coi_A          109 PFMQT-DLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHADA  178 (353)
T ss_dssp             ECCSE-EGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CTTCCEEECSTTCTTC---
T ss_pred             ccccC-CHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE----CCCCcEEEeecccccCCCC
Confidence            99985 55444432     48888899999999999999999999999999999999    7888999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....||+.|+|||++.+
T Consensus       179 ~-~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          179 E-MTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             ------CCSBCCSCHHHHSC
T ss_pred             C-ccccccCcCcCCHHHHhC
Confidence            3 345688999999998865

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=7.5e-32  Score=216.90  Aligned_cols=162  Identities=15%  Similarity=0.076  Sum_probs=126.5

Q ss_pred             CCceeeeeeecCCCC-------cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         53 DDIGQVNVPTDLEGG-------ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      |+||.||+|.+..++       ..||+|++....      ....+.+.+|+.+++.++||||+  .+++++.  .....+
T Consensus        19 G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~   88 (289)
T 4fvq_A           19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH------RNYSESFFEAASMMSKLSHKHLV--LNYGVCV--CGDENI   88 (289)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG------GGGHHHHHHHHHHHHTSCCTTBC--CEEEEEC--CTTCCE
T ss_pred             CCCceEEEEEEecccccccccchhhhhhhccccc------HHHHHHHHHHHHHHHhCCCCCEe--EEEEEEE--eCCCCE
Confidence            999999999988776       479999986532      23345678999999999999997  4555544  334568


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC----CCccEEEeecC
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR----QPYRVKVIDFG  201 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~----~~~~~kl~DFg  201 (229)
                      +||||+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+|||+.....    ..+.+||+|||
T Consensus        89 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           89 LVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             EEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             EEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            999999999977776542  223888888999999999999999999999999999999943311    01129999999


Q ss_pred             cceecCcccccceeecccCCCCccccC
Q psy11822        202 SASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++......  ....||+.|+|||++.+
T Consensus       167 ~~~~~~~~--~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          167 ISITVLPK--DILQERIPWVPPECIEN  191 (289)
T ss_dssp             SCTTTSCH--HHHHHTTTTSCHHHHHC
T ss_pred             ccccccCc--cccCCcCcccCHHHhCC
Confidence            99766443  34568899999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=2.3e-31  Score=221.84  Aligned_cols=159  Identities=25%  Similarity=0.360  Sum_probs=122.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc----cccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV----KASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~----~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|++......    ......+.+|+.+++.++||||+  .+++++...+.    ...++||
T Consensus        53 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv--~~~~~~~~~~~~~~~~~~~lv~  126 (371)
T 4exu_A           53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQS----EIFAKRAYRELLLLKHMQHENVI--GLLDVFTPASSLRNFYDFYLVM  126 (371)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSTTSS----HHHHHHHHHHHHHHHHCCCTTBC--CCSEEECSCSSSTTCCCCEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEecccccc----hhHHHHHHHHHHHHHhcCCCCch--hhhhheeccCCcccceeEEEEE
Confidence            99999999999999999999998753211    12234668999999999999997  45555443222    1248999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.+. +......     .+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus       127 e~~~~~-l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll----~~~~~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          127 PFMQTD-LQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV----NEDCELKILDFGLARHADA  196 (371)
T ss_dssp             ECCCEE-HHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECSTTCC-----
T ss_pred             cccccc-HHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE----CCCCCEEEEecCccccccc
Confidence            999964 4333332     48888999999999999999999999999999999999    8888999999999987654


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....||+.|+|||++.+
T Consensus       197 ~-~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          197 E-MTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSC
T ss_pred             C-cCCcccCccccCHHHhcC
Confidence            3 345688999999999865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=2.1e-31  Score=217.53  Aligned_cols=161  Identities=20%  Similarity=0.181  Sum_probs=127.6

Q ss_pred             CCceeeeee----ecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVP----TDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|    .+..+++.||+|+++....     ....+.+.+|+.+++.++||||+  .+++++........++||
T Consensus        42 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~lv~  114 (318)
T 3lxp_A           42 GHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-----PQHRSGWKQEIDILRTLYHEHII--KYKGCCEDAGAASLQLVM  114 (318)
T ss_dssp             CSSEEEEEEEECSCC--CCEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEEETTTTEEEEEE
T ss_pred             CCCeEEEEEEEccCCCCCCcEEEEEEeccccC-----hHHHHHHHHHHHHHHhCCCcchh--hEEEEEecCCCceEEEEE
Confidence            999999665    4556899999999876321     12234678999999999999997  455555444445679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++..    ..+++.++..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++.....
T Consensus       115 e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~----~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          115 EYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             CCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCGGGCEECCT
T ss_pred             ecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----cCCCCEEECCccccccccc
Confidence            99999998777654    348888899999999999999999999999999999999    7888999999999988755


Q ss_pred             c-----cccceeecccCCCCccccC
Q psy11822        209 A-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .     ......||+.|+|||++.+
T Consensus       187 ~~~~~~~~~~~~~~~~y~aPE~~~~  211 (318)
T 3lxp_A          187 GHEYYRVREDGDSPVFWYAPECLKE  211 (318)
T ss_dssp             TCSEEEC---CCCCGGGCCHHHHHH
T ss_pred             cccccccccCCCCCceeeChHHhcC
Confidence            3     1234578888999998754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=1.8e-31  Score=217.32  Aligned_cols=161  Identities=24%  Similarity=0.200  Sum_probs=122.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+++.||||++....      ....+.+.+|+.++.++ +||||+  .+++++.  +....++||||+
T Consensus        24 G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~~~~h~~i~--~~~~~~~--~~~~~~lv~e~~   93 (316)
T 2ac3_A           24 GAHARVQTCINLITSQEYAVKIIEKQP------GHIRSRVFREVEMLYQCQGHRNVL--ELIEFFE--EEDRFYLVFEKM   93 (316)
T ss_dssp             CSSEEEEEEECSSSCCEEEEEEEECCS------SCCHHHHHHHHHHHHHTCCCTTBC--CEEEEEE--ETTEEEEEEECC
T ss_pred             CceEEEEEEEEcCCCcEEEEEEEeeCc------chhHHHHHHHHHHHHHhcCCCCee--eEEEEEe--eCCEEEEEEEcC
Confidence            999999999999999999999986531      22344678899999885 799997  4555544  334679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+..+ +....+||+|||++......  
T Consensus        94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~-~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP-NQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCS-SSSCSEEECCTTCCC-------
T ss_pred             CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccC-CCcCceEEEEccCccccccCCc
Confidence            99997666554   2358888899999999999999999999999999999999332 22234999999998765321  


Q ss_pred             -------cccceeecccCCCCcccc
Q psy11822        210 -------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -------~~~~~~gt~~y~aPE~l~  227 (229)
                             .....+||+.|+|||++.
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~  194 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVE  194 (316)
T ss_dssp             ------------CCSGGGCCHHHHH
T ss_pred             cccccccccccccCCcCccChHHhh
Confidence                   223457999999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=6.3e-32  Score=224.97  Aligned_cols=166  Identities=14%  Similarity=0.089  Sum_probs=123.4

Q ss_pred             CCceeeeeee-----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPT-----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|+     +..+++.||||+++....     ......+.+|+.+++.++||||+  .+++++.  +....++|
T Consensus        82 G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv--~~~~~~~--~~~~~~lv  152 (367)
T 3l9p_A           82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEALIISKFNHQNIV--RCIGVSL--QSLPRFIL  152 (367)
T ss_dssp             CSSSCEEEEEECC-----CCEEEEEEECCSSCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             CCCEEEEEEEEccCCCCCcceeEEEEecccccC-----hhhHHHHHHHHHHHHhCCCCCCC--eEEEEEe--cCCCCEEE
Confidence            9999999999     445788999999864211     11222567899999999999998  4444443  34457999


Q ss_pred             eeeeeCCCCCccCCCC----CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        128 MEVTRRSQYTGATAPP----PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~----~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      |||+++|+|..++...    .....+++.+++.++.|++.||.|||++||+||||||+|||+... .....+||+|||+|
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~~~~kL~DFG~a  231 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMA  231 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecC-CCCceEEECCCccc
Confidence            9999999876654431    112347777888999999999999999999999999999999322 23446999999999


Q ss_pred             eecCc----ccccceeecccCCCCccccC
Q psy11822        204 SHVSK----AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~----~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +....    .......||+.|+|||++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  260 (367)
T 3l9p_A          232 RDIYRAGYYRKGGCAMLPVKWMPPEAFME  260 (367)
T ss_dssp             HHHHHHSSCTTCCGGGSCGGGCCHHHHHH
T ss_pred             cccccccccccCCCcCCcccEECHHHhcC
Confidence            86532    12345678899999998753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=3.6e-31  Score=214.47  Aligned_cols=159  Identities=22%  Similarity=0.243  Sum_probs=132.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|+++....     ....+.+.+|+.+++.+.||||+.  +++++.  .....++||||++
T Consensus        33 G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~  103 (303)
T 3a7i_A           33 GSFGEVFKGIDNRTQKVVAIKIIDLEEA-----EDEIEDIQQEITVLSQCDSPYVTK--YYGSYL--KDTKLWIIMEYLG  103 (303)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEETTTC-----STTHHHHHHHHHHHHHCCCTTBCC--EEEEEE--ETTEEEEEEECCT
T ss_pred             cCCeEEEEEEECCCCcEEEEEEeccccc-----HHHHHHHHHHHHHHHhCCCCCEeE--EEEEEe--cCCeEEEEEEeCC
Confidence            9999999999999999999999865321     223456789999999999999974  444433  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...    ..+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  .
T Consensus       104 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  175 (303)
T 3a7i_A          104 GGSALDLLEP----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL----SEHGEVKLADFGVAGQLTDTQIK  175 (303)
T ss_dssp             TEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECBTTBCC
T ss_pred             CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE----CCCCCEEEeecccceecCccccc
Confidence            9997777654    468888999999999999999999999999999999999    77889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       176 ~~~~~~~~~y~aPE~~~~  193 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQ  193 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTT
T ss_pred             cCccCCCcCccCHHHHhc
Confidence            345789999999999865

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=1.2e-31  Score=219.04  Aligned_cols=166  Identities=16%  Similarity=0.158  Sum_probs=114.1

Q ss_pred             CCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc----cccc
Q psy11822         53 DDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV----KASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~----~~~~  125 (229)
                      |+||.||+|++..++.   .||+|+++.....    ....+.+.+|+.+++.++||||+  .+++++.....    ...+
T Consensus        34 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~~  107 (323)
T 3qup_A           34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIA----SSDIEEFLREAACMKEFDHPHVA--KLVGVSLRSRAKGRLPIPM  107 (323)
T ss_dssp             ETTEEEEEEEC-------CEEEEEEC----------CHHHHHHHHHHHHHTTCCCTTBC--CCCEEEECC-------CEE
T ss_pred             cCCeEEEEEEEcccCCcceeEEEEEecccccC----HHHHHHHHHHHHHHHHCCCCcee--hhhceeeccccccCCCccE
Confidence            9999999999887765   8999998764322    22345678999999999999997  44444432221    1238


Q ss_pred             eeeeeeeCCCCCccCCCC---CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        126 QMMEVTRRSQYTGATAPP---PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~---~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      +||||++++++..++...   .....+++.++..++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus       108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli----~~~~~~kl~Dfg~  183 (323)
T 3qup_A          108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML----AEDMTVCVADFGL  183 (323)
T ss_dssp             EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC
T ss_pred             EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE----cCCCCEEEeeccc
Confidence            999999999976654321   111247888889999999999999999999999999999999    7788999999999


Q ss_pred             ceecCcc----cccceeecccCCCCccccC
Q psy11822        203 ASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.....    ......+++.|+|||++.+
T Consensus       184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          184 SRKIYSGDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             -----------------CCGGGCCHHHHHH
T ss_pred             cccccccccccccccccCcccccCchhhcC
Confidence            9876443    2234566788999998754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=9.6e-32  Score=215.60  Aligned_cols=166  Identities=17%  Similarity=0.196  Sum_probs=127.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+++.||+|+++.....    ......+.+|+..+..+ +||||+.  +++++.  +....++||||+
T Consensus        22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~~~~l~~h~~iv~--~~~~~~--~~~~~~lv~e~~   93 (289)
T 1x8b_A           22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAG----SVDEQNALREVYAHAVLGQHSHVVR--YFSAWA--EDDHMLIQNEYC   93 (289)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCCTT----SHHHHHHHHHHHHHHHSCSCTTBCC--EEEEEE--ETTEEEEEEECC
T ss_pred             CCceEEEEEEEcCCCceEEEEEecccccc----cHHHHHHHHHHHHHHHhCCCCCeee--eeeeee--cCCeEEEEEEec
Confidence            89999999999999999999998753211    11223557888888888 9999984  444443  344679999999


Q ss_pred             eCCCCCccCCCCCC-CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC---------------CCCccE
Q psy11822        132 RRSQYTGATAPPPP-AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------RQPYRV  195 (229)
Q Consensus       132 ~~~~l~~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~---------------~~~~~~  195 (229)
                      ++++|..++..... ...+++.++..++.|++.||.|||++||+||||||+||++....               .....+
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (289)
T 1x8b_A           94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF  173 (289)
T ss_dssp             TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred             CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence            99997776543111 13478888999999999999999999999999999999994321               144589


Q ss_pred             EEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||++......  ....||+.|+|||++.+
T Consensus       174 kl~Dfg~~~~~~~~--~~~~gt~~y~aPE~~~~  204 (289)
T 1x8b_A          174 KIGDLGHVTRISSP--QVEEGDSRFLANEVLQE  204 (289)
T ss_dssp             EECCCTTCEETTCS--CCCCCCGGGCCHHHHTT
T ss_pred             EEcccccccccCCc--cccCCCccccChhHhcC
Confidence            99999999887654  33569999999999865

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=2.8e-31  Score=214.33  Aligned_cols=161  Identities=16%  Similarity=0.207  Sum_probs=126.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+|+.||+|+++..        ...+.+.+|+..++.+ +|+|++  .+++++.  .....++||||+
T Consensus        21 G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~e~~~~~~l~~~~~i~--~~~~~~~--~~~~~~lv~e~~   88 (298)
T 1csn_A           21 GSFGVIFEGTNLLNNQQVAIKFEPRR--------SDAPQLRDEYRTYKLLAGCTGIP--NVYYFGQ--EGLHNVLVIDLL   88 (298)
T ss_dssp             CSSCEEEEEEETTTTEEEEEEEEECC--------TTSCCHHHHHHHHHHTTTCTTCC--CEEEEEE--ETTEEEEEEECC
T ss_pred             cCCEEEEEEEECCCCcEEEEEEeccC--------CccHHHHHHHHHHHHHhcCCCCC--eEEeecC--CCceeEEEEEec
Confidence            99999999999999999999987642        2234568899999988 789886  4444443  344579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEeecCcceecCccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~~~~~~~  210 (229)
                       +++|..++...  ...+++.++..++.|++.||.|||++||+||||||+||++.... ...+.+||+|||+++......
T Consensus        89 -~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~  165 (298)
T 1csn_A           89 -GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  165 (298)
T ss_dssp             -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             -CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence             88876665532  23488889999999999999999999999999999999994322 123349999999998775431


Q ss_pred             ---------ccceeecccCCCCccccC
Q psy11822        211 ---------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ---------~~~~~gt~~y~aPE~l~~  228 (229)
                               .....||+.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (298)
T 1csn_A          166 TKQHIPYREKKNLSGTARYMSINTHLG  192 (298)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             ccccccccCccCCCCCcccCCchhhcC
Confidence                     245689999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=1.4e-31  Score=214.56  Aligned_cols=159  Identities=20%  Similarity=0.195  Sum_probs=128.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--------------
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--------------  118 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--------------  118 (229)
                      |+||.||+|.+..+++.||+|.++..          .+.+.+|+++++.++||||+.  +++++..              
T Consensus        22 G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~e~~~l~~l~h~~i~~--~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           22 GGFGQVFKAKHRIDGKTYVIKRVKYN----------NEKAEREVKALAKLDHVNIVH--YNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             SSSCCEEEEEETTTCCEEEEEEEECC----------SGGGHHHHHHHHHCCCTTBCC--EEEEEEEEEEC---------C
T ss_pred             CCceEEEEEEEcCCCeEEEEEEeccc----------cHHHHHHHHHHHhCCCCCEEE--EeeeEeccccCcccccccccc
Confidence            99999999999989999999998652          135578999999999999984  3333321              


Q ss_pred             ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEe
Q psy11822        119 NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVI  198 (229)
Q Consensus       119 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~  198 (229)
                      ......++||||+++++|..++.... ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~  164 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIG  164 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEEC
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE----cCCCCEEEC
Confidence            12345789999999999777654311 2357888889999999999999999999999999999999    677799999


Q ss_pred             ecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      |||++...... ......||+.|+|||++.+
T Consensus       165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (284)
T 2a19_B          165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISS  195 (284)
T ss_dssp             CCTTCEESSCCSCCCCCCSCCTTSCHHHHHC
T ss_pred             cchhheeccccccccccCCcccccChhhhcc
Confidence            99999887654 3345689999999998764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.96  E-value=5e-31  Score=215.71  Aligned_cols=163  Identities=19%  Similarity=0.152  Sum_probs=128.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+ .+|+.||+|++.....     ......+.+|+.+++.++||||+  .+++++.  +....++||||+
T Consensus        40 ~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~e~~  109 (326)
T 3uim_A           40 RGGFGKVYKGRL-ADGTLVAVKRLKEERT-----QGGELQFQTEVEMISMAVHRNLL--RLRGFCM--TPTERLLVYPYM  109 (326)
T ss_dssp             CCSSSEEEEECC-SSSCCEEEEECCC----------CCCHHHHHHHGGGTCCCTTBC--CCCEEEC--CSSCCEEEEECC
T ss_pred             cCCCcEEEEEEe-cCCCEEEEEEeccccC-----chHHHHHHHHHHHHHhccCCCcc--ceEEEEe--cCCceEEEEEec
Confidence            399999999985 4699999999876422     12223578999999999999997  4555544  344578999999


Q ss_pred             eCCCCCccCCCCC-CCCccccCCccchHHHHHHHHHHHHHC---CCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        132 RRSQYTGATAPPP-PAQVLVPAPPGNVTLQVLTALLKLKQL---GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       132 ~~~~l~~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~LH~~---~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      +++++..++.... ....+++..+..++.|++.||.|||++   ||+||||||+|||+    +.++.+||+|||+++...
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          110 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE----CTTCCEEECCCSSCEECC
T ss_pred             cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE----CCCCCEEeccCccccccC
Confidence            9999766654422 233488888899999999999999999   99999999999999    788899999999998775


Q ss_pred             cc---cccceeecccCCCCccccC
Q psy11822        208 KA---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..   ......||+.|+|||++.+
T Consensus       186 ~~~~~~~~~~~gt~~y~aPE~~~~  209 (326)
T 3uim_A          186 YKDTHVTTAVRGTIGHIAPEYLST  209 (326)
T ss_dssp             SSSSCEECCCCSCGGGCCHHHHHH
T ss_pred             cccccccccccCCcCccCHHHhcc
Confidence            32   2344569999999998753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=1.1e-31  Score=225.53  Aligned_cols=159  Identities=26%  Similarity=0.331  Sum_probs=121.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|++..+++ +|+|.+...          .....+|+.+++.++||||+.  +++++..    .+....++||
T Consensus        51 G~~g~V~~a~~~~~~~-~aikk~~~~----------~~~~~~E~~il~~l~h~niv~--l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           51 GSFGVVFQAKLVESDE-VAIKKVLQD----------KRFKNRELQIMRIVKHPNVVD--LKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             ETTEEEEEEEETTTEE-EEEEEEECC----------TTSCCHHHHHHHTCCCTTBCC--EEEEEEEESSSSSCEEEEEEE
T ss_pred             CCCeEEEEEEECCCCe-EEEEEEecC----------cchHHHHHHHHHhCCCCCcce--EEEEEEecCCCCCceEEEEEe
Confidence            8999999999877666 888876431          113367999999999999984  3333322    2223468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC-CCccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~  207 (229)
                      ||++++.+..+.........+++..+..++.|++.||.|||++||+||||||+|||+    + .++.+||+|||+|+...
T Consensus       118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill----~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL----DPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----ETTTTEEEECCCTTCEECC
T ss_pred             eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEE----cCCCCcEEEeeCCCccccc
Confidence            999987644332111112358888889999999999999999999999999999999    5 57799999999998875


Q ss_pred             cc-cccceeecccCCCCccccC
Q psy11822        208 KA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .. ......||+.|+|||++.+
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~  215 (394)
T 4e7w_A          194 AGEPNVSYICSRYYRAPELIFG  215 (394)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTT
T ss_pred             CCCCCcccccCcCccCHHHHcC
Confidence            43 3456789999999999865

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=5e-31  Score=216.65  Aligned_cols=163  Identities=15%  Similarity=0.189  Sum_probs=125.6

Q ss_pred             CCceeeeeeecC-------CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDL-------EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++.       .++..||+|+++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....
T Consensus        46 G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv--~~~~~~~--~~~~~  116 (334)
T 2pvf_A           46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-----EKDLSDLVSEMEMMKMIGKHKNII--NLLGACT--QDGPL  116 (334)
T ss_dssp             CSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSCC
T ss_pred             cCceeEEEeEeccccccccccceEEEEeeeccCCc-----HHHHHHHHHHHHHHHHhhcCCCEe--eEEEEEc--cCCce
Confidence            999999999875       4678999999875321     12234678999999999 899997  4454443  34567


Q ss_pred             ceeeeeeeCCCCCccCCCCCC-------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPPP-------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      ++||||+++++|..++.....             ...+++.++..++.|++.||.|||++||+||||||+||++    +.
T Consensus       117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----~~  192 (334)
T 2pvf_A          117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TE  192 (334)
T ss_dssp             EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CT
T ss_pred             EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE----cC
Confidence            999999999997666544221             2247777888999999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++.....    ......+|+.|+|||++.+
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  233 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  233 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcC
Confidence            889999999999877543    2234567888999998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=5.5e-31  Score=225.06  Aligned_cols=157  Identities=17%  Similarity=0.148  Sum_probs=126.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..||||+++..       ....+.+.+|+.+++.++||||+.  +++++.   ....++||||++
T Consensus       199 G~fg~V~~~~~~-~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~--l~~~~~---~~~~~lv~e~~~  265 (454)
T 1qcf_A          199 GQFGEVWMATYN-KHTKVAVKTMKPG-------SMSVEAFLAEANVMKTLQHDKLVK--LHAVVT---KEPIYIITEFMA  265 (454)
T ss_dssp             CSSEEEEEEEET-TTEEEEEEEECTT-------SBCHHHHHHHHHHHTTCCCTTBCC--EEEEEC---SSSCEEEECCCT
T ss_pred             CCceEEEEEEEC-CccEEEEEEecCC-------CccHHHHHHHHHHHhhCCCCCEee--EEEEEe---CCccEEEEeecC
Confidence            999999999975 5788999998763       223557789999999999999984  333332   345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +|+|..++.... ...+++.++..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++......  
T Consensus       266 ~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          266 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV----SASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             TCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTCCEEECSTTGGGGBCCHHHH
T ss_pred             CCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE----CCCCcEEEeeCCCceEcCCCcee
Confidence            999777665311 1246777788999999999999999999999999999999    778899999999998775432  


Q ss_pred             -ccceeecccCCCCcccc
Q psy11822        211 -CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~  227 (229)
                       .....+|+.|+|||++.
T Consensus       341 ~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHH
T ss_pred             ccCCCcccccccCHHHhc
Confidence             23445678899999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=2.7e-31  Score=211.49  Aligned_cols=158  Identities=18%  Similarity=0.133  Sum_probs=126.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..||+|+++...       ...+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        19 G~~g~V~~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   86 (268)
T 3sxs_A           19 GQFGVVKLGKWK-GQYDVAVKMIKEGS-------MSEDEFFQEAQTMMKLSHPKLV--KFYGVCS--KEYPIYIVTEYIS   86 (268)
T ss_dssp             ETTEEEEEEEET-TTEEEEEEEECBTT-------BCHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSEEEEEECCT
T ss_pred             CCCceEEEEEec-CceeEEEEEeccCC-------CcHHHHHHHHHHHHhCCCCCEe--eEEEEEc--cCCceEEEEEccC
Confidence            999999999875 57789999987531       1234568899999999999997  4444443  4455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..++...  ...+++.++..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++.......  
T Consensus        87 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           87 NGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV----DRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             TCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE----CTTCCEEECCTTCEEECCTTCEE
T ss_pred             CCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE----CCCCCEEEccCccceecchhhhh
Confidence            99876665431  2348888899999999999999999999999999999999    888899999999998775542  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+|+.|+|||++.+
T Consensus       161 ~~~~~~~~~~y~aPE~~~~  179 (268)
T 3sxs_A          161 SSVGTKFPVKWSAPEVFHY  179 (268)
T ss_dssp             ECCSCCCCGGGCCHHHHHH
T ss_pred             cccCCCcCcccCCHHHHhc
Confidence             234456678999998753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.5e-31  Score=216.63  Aligned_cols=157  Identities=17%  Similarity=0.118  Sum_probs=120.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc--cccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN--NVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~--~~~~~~lv~e~  130 (229)
                      |+||.||+|++.  ++.||+|++.......       .....|+.....++||||+.  +++++...  .....++||||
T Consensus        48 G~~g~V~~~~~~--~~~vavK~~~~~~~~~-------~~~e~~~~~~~~~~h~~i~~--~~~~~~~~~~~~~~~~lv~e~  116 (337)
T 3mdy_A           48 GRYGEVWMGKWR--GEKVAVKVFFTTEEAS-------WFRETEIYQTVLMRHENILG--FIAADIKGTGSWTQLYLITDY  116 (337)
T ss_dssp             ETTEEEEEEEET--TEEEEEEEEEGGGHHH-------HHHHHHHHTSTTCCCTTBCC--EEEEEEESCGGGCEEEEEECC
T ss_pred             CCCeEEEEEEEC--CceEEEEEEeccccch-------hhhHHHHHHHHhhcCCCeee--EEEEEccCCCCCCceEEEEec
Confidence            999999999975  8999999986532111       11133444445569999984  44333322  22467999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC--------CCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL--------GLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~--------~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      +++++|..++..    ..+++.++..++.|++.||.|||+.        ||+||||||+|||+    +.++.+||+|||+
T Consensus       117 ~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfg~  188 (337)
T 3mdy_A          117 HENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGL  188 (337)
T ss_dssp             CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE----CTTSCEEECCCTT
T ss_pred             cCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE----CCCCCEEEEeCCC
Confidence            999998777654    3588888999999999999999998        99999999999999    7888999999999


Q ss_pred             ceecCccc------ccceeecccCCCCccccC
Q psy11822        203 ASHVSKAV------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~~------~~~~~gt~~y~aPE~l~~  228 (229)
                      ++......      .....||+.|+|||++.+
T Consensus       189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  220 (337)
T 3mdy_A          189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE  220 (337)
T ss_dssp             CEECC---------CCSSCSCGGGCCHHHHTT
T ss_pred             ceeeccccccccCCCCCCccCcceeChhhccc
Confidence            98775432      135689999999999865

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=5.9e-31  Score=213.96  Aligned_cols=156  Identities=22%  Similarity=0.215  Sum_probs=117.3

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++.  ++.||+|.+...        ...+.+.+|++++++++||||+.  +++++.    ...++||||+
T Consensus        18 ~G~~g~V~~~~~~--~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~hp~iv~--~~~~~~----~~~~lv~e~~   81 (307)
T 2eva_A           18 RGAFGVVCKAKWR--AKDVAIKQIESE--------SERKAFIVELRQLSRVNHPNIVK--LYGACL----NPVCLVMEYA   81 (307)
T ss_dssp             CCSSSEEEEEEET--TEEEEEEECSST--------THHHHHHHHHHHHHHCCCTTBCC--EEEBCT----TTTEEEEECC
T ss_pred             cCCCceEEEEEEC--CeeEEEEEecCh--------hHHHHHHHHHHHHhcCCCCCcCe--EEEEEc----CCcEEEEEcC
Confidence            3999999999975  789999998652        22346688999999999999974  444433    2368999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH---CCCccccCCCCCeeeeCCCCCCcc-EEEeecCcceecC
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ---LGLIHADLKPENIMLVDPVRQPYR-VKVIDFGSASHVS  207 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~---~~iiHrDlkp~Nil~~~~~~~~~~-~kl~DFg~a~~~~  207 (229)
                      ++++|..++........+++..+..++.|+++||.|||+   +||+||||||+||++    +.++. +||+|||++....
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL----VAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE----ETTTTEEEECCCCC-----
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE----eCCCCEEEEcccccccccc
Confidence            999987776653333346667778899999999999999   899999999999999    55554 8999999998665


Q ss_pred             cccccceeecccCCCCccccC
Q psy11822        208 KAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... ....||+.|+|||++.+
T Consensus       158 ~~~-~~~~gt~~y~aPE~~~~  177 (307)
T 2eva_A          158 THM-TNNKGSAAWMAPEVFEG  177 (307)
T ss_dssp             --------CCTTSSCHHHHTC
T ss_pred             ccc-ccCCCCCceEChhhhCC
Confidence            432 34579999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=6.4e-31  Score=215.84  Aligned_cols=159  Identities=16%  Similarity=0.114  Sum_probs=120.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhh-hcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYA-HCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~-~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++  +++.||+|++........       ....|+..+..++||||+.+...... .......+++||||+
T Consensus        24 G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~-------~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~   94 (336)
T 3g2f_A           24 GRYGAVYKGSL--DERPVAVKVFSFANRQNF-------INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY   94 (336)
T ss_dssp             CSSEEEEEEEE--TTEEEEEEEEEGGGHHHH-------HHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred             CCCeEEEEEEE--CCeEEEEEEeeccchhhH-------HHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence            99999999986  589999999875422211       11345555677899999843211111 122334568999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC---------CCccccCCCCCeeeeCCCCCCccEEEeecCc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL---------GLIHADLKPENIMLVDPVRQPYRVKVIDFGS  202 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~---------~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~  202 (229)
                      ++|+|..++..    ...++..++.++.|++.||.|||+.         ||+||||||+|||+    +.++.+||+|||+
T Consensus        95 ~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill----~~~~~~kL~DFG~  166 (336)
T 3g2f_A           95 PNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV----KNDGTCVISDFGL  166 (336)
T ss_dssp             TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE----CTTSCEEECCCTT
T ss_pred             CCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE----cCCCcEEEeeccc
Confidence            99998777654    2457777889999999999999999         99999999999999    7788999999999


Q ss_pred             ceecCcc----------cccceeecccCCCCccccC
Q psy11822        203 ASHVSKA----------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       203 a~~~~~~----------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+...          ......||+.|+|||++.+
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG  202 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcC
Confidence            9876432          1224579999999999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=2e-31  Score=214.41  Aligned_cols=162  Identities=19%  Similarity=0.197  Sum_probs=112.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|+++......    ...+.+.++...++.++||||+  .+++++.  .....++||||++
T Consensus        18 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~~~~~~~~h~~iv--~~~~~~~--~~~~~~lv~e~~~   89 (290)
T 3fme_A           18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQ----EQKRLLMDLDISMRTVDCPFTV--TFYGALF--REGDVWICMELMD   89 (290)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEC---CHH----HHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSSEEEEEECCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEeecccCcH----HHHHHHHHHHHHHHhCCCCeEE--EEeeeee--ccCCEEEEEehhc
Confidence            999999999999999999999987642221    1122334455557888999997  4444443  3445799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      ++..+.+.........+++..+..++.|++.||.|||++ ||+||||||+||++    +..+.+||+|||++...... .
T Consensus        90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~  165 (290)
T 3fme_A           90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI----NALGQVKMCDFGISGYLVDDVA  165 (290)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE----CTTCCEEBCCC-----------
T ss_pred             cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE----CCCCCEEEeecCCccccccccc
Confidence            744222211111134688888999999999999999998 99999999999999    77889999999999877554 3


Q ss_pred             ccceeecccCCCCccc
Q psy11822        211 CNTYLQSRYYRAPEII  226 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l  226 (229)
                      .....||+.|+|||++
T Consensus       166 ~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          166 KDIDAGCKPYMAPERI  181 (290)
T ss_dssp             ----CCCCCCSCHHHH
T ss_pred             ccccCCCccccChhhc
Confidence            3445899999999996

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=3.5e-31  Score=212.49  Aligned_cols=158  Identities=16%  Similarity=0.114  Sum_probs=125.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..||+|+++...       ...+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        35 G~~g~V~~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~  102 (283)
T 3gen_A           35 GQFGVVKYGKWR-GQYDVAIKMIKEGS-------MSEDEFIEEAKVMMNLSHEKLV--QLYGVCT--KQRPIFIITEYMA  102 (283)
T ss_dssp             --CEEEEEEEET-TTEEEEEEEECTTS-------BCHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSEEEEECCCT
T ss_pred             CCCceEEEEEEc-CCCeEEEEEecCCC-------CCHHHHHHHHHHHhcCCCCCEe--eEEEEEe--cCCCeEEEEeccC
Confidence            899999999875 67889999987531       1234568899999999999997  4454443  4455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus       103 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~~~~  176 (283)
T 3gen_A          103 NGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDEYT  176 (283)
T ss_dssp             TCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE----CTTSCEEECSTTGGGGBCCHHHH
T ss_pred             CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE----cCCCCEEEccccccccccccccc
Confidence            99976665431  2358888899999999999999999999999999999999    78889999999999877543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+|+.|+|||++.+
T Consensus       177 ~~~~~~~~~~y~aPE~~~~  195 (283)
T 3gen_A          177 SSVGSKFPVRWSPPEVLMY  195 (283)
T ss_dssp             STTSTTSCGGGCCHHHHHH
T ss_pred             cccCCccCcccCCHHHhcc
Confidence            2234566788999998753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=1.7e-31  Score=218.95  Aligned_cols=160  Identities=18%  Similarity=0.145  Sum_probs=119.0

Q ss_pred             CCceeeeeeecCCCCcE----EEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGEL----LAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++..+++.    ||+|.++...     .....+.+.+|+.+++.++||||+  .+++++...   ..++|+
T Consensus        26 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~---~~~~v~   95 (327)
T 3poz_A           26 GAFGTVYKGLWIPEGEKVKIPVAIKELREAT-----SPKANKEILDEAYVMASVDNPHVC--RLLGICLTS---TVQLIT   95 (327)
T ss_dssp             ETTEEEEEEEECC----CCEEEEEEEC------------CHHHHHHHHHHHHHCCBTTBC--CEEEEEESS---SEEEEE
T ss_pred             CCCeEEEEEEEcCCCceEEEEEEEeeccccc-----CHHHHHHHHHHHHHHHhCCCCCEe--EEEEEEecC---CeEEEE
Confidence            99999999998877765    5888776432     123345678999999999999997  445444332   367999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.+|++..++...  ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+....
T Consensus        96 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll----~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A           96 QLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             ECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTHHHHHTT
T ss_pred             EecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE----CCCCCEEEccCcceeEccC
Confidence            999999966654431  2358888889999999999999999999999999999999    7777999999999987654


Q ss_pred             c----cccceeecccCCCCccccC
Q psy11822        209 A----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .    ......||+.|+|||++.+
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3poz_A          170 EEKEYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             TCC-------CCCGGGSCHHHHHH
T ss_pred             CcccccccCCCccccccChHHhcc
Confidence            3    1234566889999998754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=3.9e-31  Score=213.59  Aligned_cols=164  Identities=18%  Similarity=0.173  Sum_probs=131.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHH---HHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFI---DLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|+++....   .........+.+.+|+.+++++. ||||+  .+++++.  .....++||
T Consensus        28 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~--~~~~~~~--~~~~~~lv~  103 (298)
T 1phk_A           28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII--QLKDTYE--TNTFFFLVF  103 (298)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC--CEEEEEE--CSSEEEEEE
T ss_pred             CCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe--eeeeeec--cCCeEEEEE
Confidence            9999999999999999999999764210   00111223446789999999995 99997  4444443  345679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++..   ...+++.++..++.|++.||.|||++|++||||||+||++    +.++.+||+|||++.....
T Consensus       104 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~  176 (298)
T 1phk_A          104 DLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDP  176 (298)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCT
T ss_pred             eccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE----cCCCcEEEecccchhhcCC
Confidence            99999997776554   2458888899999999999999999999999999999999    7888999999999987754


Q ss_pred             c-cccceeecccCCCCcccc
Q psy11822        209 A-VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~  227 (229)
                      . ......||+.|+|||++.
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          177 GEKLREVCGTPSYLAPEIIE  196 (298)
T ss_dssp             TCCBCCCCSCGGGCCHHHHH
T ss_pred             CcccccccCCccccCHHHhc
Confidence            3 345678999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=4.8e-31  Score=214.33  Aligned_cols=163  Identities=18%  Similarity=0.147  Sum_probs=127.8

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++     ..+++.||+|+++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....++
T Consensus        34 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~i~--~~~~~~~--~~~~~~l  104 (313)
T 1t46_A           34 GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-----LTEREALMSELKVLSYLGNHMNIV--NLLGACT--IGGPTLV  104 (313)
T ss_dssp             CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEE
T ss_pred             cCCcceEEEEEeeccccchhhhhHHHhcCcchh-----HHHHHHHHHHHHHHhhcccCCCee--eEEEEEe--cCCCcEE
Confidence            99999999984     56789999999875321     11234678999999999 999997  4454443  3345799


Q ss_pred             eeeeeeCCCCCccCCCCCC---------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        127 MMEVTRRSQYTGATAPPPP---------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~---------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      ||||+++++|..++.....               ...+++.++..++.|++.||.|||++||+||||||+||++    +.
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~  180 (313)
T 1t46_A          105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----TH  180 (313)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----ET
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE----cC
Confidence            9999999887665443211               1247888889999999999999999999999999999999    77


Q ss_pred             CccEEEeecCcceecCccc----ccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKAV----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~~----~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||++.......    .....||+.|+|||++.+
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  221 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN  221 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcC
Confidence            7899999999998775432    235678889999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=4.9e-31  Score=214.86  Aligned_cols=164  Identities=20%  Similarity=0.210  Sum_probs=127.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh--cccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH--CNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~--~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+|+.||+|++....      ....+.+.+|+.+++.++||||+  .+++++.  .......++||||
T Consensus        40 G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~lv~e~  111 (317)
T 2buj_A           40 GGFSYVDLVEGLHDGHFYALKRILCHE------QQDREEAQREADMHRLFNHPNIL--RLVAYCLRERGAKHEAWLLLPF  111 (317)
T ss_dssp             --CEEEEEEEETTTCCEEEEEEEEESS------HHHHHHHHHHHHHHHTCCCTTBC--CCCEEEEEEETTEEEEEEEEEC
T ss_pred             CCCeEEEEEEecCCCcEEEEEEEecCC------HHHHHHHHHHHHHHhhcCCCCee--eEEEEEEeccCCCceeEEEEEe
Confidence            899999999999999999999875421      11234568899999999999997  4444443  2233467899999


Q ss_pred             eeCCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        131 TRRSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +++++|..++... .....+++.+++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~----~~~~~~kl~dfg~~~~~~~~  187 (317)
T 2buj_A          112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL----GDEGQPVLMDLGSMNQACIH  187 (317)
T ss_dssp             CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCSSCEESCEE
T ss_pred             CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE----cCCCCEEEEecCcchhcccc
Confidence            9999975554321 113458888999999999999999999999999999999999    77889999999998876432


Q ss_pred             -----------cccceeecccCCCCccccC
Q psy11822        210 -----------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----------~~~~~~gt~~y~aPE~l~~  228 (229)
                                 ......||+.|+|||++.+
T Consensus       188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  217 (317)
T 2buj_A          188 VEGSRQALTLQDWAAQRCTISYRAPELFSV  217 (317)
T ss_dssp             EESHHHHHHHHHHHHHHSCGGGCCGGGSSC
T ss_pred             cccccccccccccccccCCcccCCHhHhcc
Confidence                       1123567999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=5.1e-31  Score=216.12  Aligned_cols=166  Identities=20%  Similarity=0.222  Sum_probs=127.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+++.||+|+++....    .......+.+|+.+++.+ .||||+  .+++++.  +....++||||+
T Consensus        40 G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~~iv--~~~~~~~--~~~~~~lv~e~~  111 (327)
T 3lm5_A           40 GKFAVVRQCISKSTGQEYAAKFLKKRRR----GQDCRAEILHEIAVLELAKSCPRVI--NLHEVYE--NTSEIILILEYA  111 (327)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEESEET----TEECHHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEehhhc----chHHHHHHHHHHHHHHhccCCCCEE--EEEEEEE--eCCeEEEEEEec
Confidence            9999999999999999999999875311    112234668899999888 569997  4444443  345579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      +++++..++.... ...+++.+++.++.|++.||+|||++||+||||||+|||+... ...+.+||+|||+++..... .
T Consensus       112 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~~~  189 (327)
T 3lm5_A          112 AGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI-YPLGDIKIVDFGMSRKIGHACE  189 (327)
T ss_dssp             TTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB-TTBCCEEECCGGGCEEC-----
T ss_pred             CCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC-CCCCcEEEeeCccccccCCccc
Confidence            9999777754322 2458888999999999999999999999999999999999332 12679999999999987654 3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       190 ~~~~~gt~~y~aPE~~~~  207 (327)
T 3lm5_A          190 LREIMGTPEYLAPEILNY  207 (327)
T ss_dssp             ----CCCGGGCCHHHHTT
T ss_pred             cccccCCcCccCCeeecC
Confidence            355789999999999865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=2.3e-31  Score=213.56  Aligned_cols=159  Identities=17%  Similarity=0.123  Sum_probs=115.1

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+   +..||+|.++....     ....+.+.+|+.+++.++||||+.  +++++.   ....++|||
T Consensus        26 G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~---~~~~~lv~e   95 (281)
T 1mp8_A           26 GQFGDVHQGIYMSPENPALAVAIKTCKNCTS-----DSVREKFLQEALTMRQFDHPHIVK--LIGVIT---ENPVWIIME   95 (281)
T ss_dssp             CSSSEEEEEEECCC--CCEEEEEEECTTTTS-----HHHHHHHHHHHHHHHTCCCTTBCC--EEEEEC---SSSCEEEEE
T ss_pred             cCCeeEEEEEEecCCCCceEEEEEeccccCC-----HHHHHHHHHHHHHHHhCCCCccce--EEEEEc---cCccEEEEe
Confidence            99999999998653   55799998765311     122346789999999999999974  444432   235789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++..++...  ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.....
T Consensus        96 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           96 LCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             CCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC----------
T ss_pred             cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEE----CCCCCEEECccccccccCcc
Confidence            99999976665431  2247888889999999999999999999999999999999    66779999999999877543


Q ss_pred             ---cccceeecccCCCCcccc
Q psy11822        210 ---VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~  227 (229)
                         ......+|+.|+|||++.
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             ---------CCGGGCCHHHHH
T ss_pred             cccccccCCCcccccChhhcc
Confidence               223456778899999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=7.6e-32  Score=219.30  Aligned_cols=165  Identities=21%  Similarity=0.205  Sum_probs=127.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc----cCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL----NHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l----~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++..+++.||+|+++...............+.+|+.+++.+    +||||+  .+++++.  .....++||
T Consensus        42 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~--~~~~~~~--~~~~~~~v~  117 (312)
T 2iwi_A           42 GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVI--RLLDWFE--TQEGFMLVL  117 (312)
T ss_dssp             ETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBC--CEEEEC-------CEEEE
T ss_pred             CCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCee--eEEEEEe--cCCeEEEEE
Confidence            89999999999999999999998653221111122334567889999888    899997  4444443  334578999


Q ss_pred             ee-eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC-CCccEEEeecCcceec
Q psy11822        129 EV-TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHV  206 (229)
Q Consensus       129 e~-~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~  206 (229)
                      |+ +.++++..++..   ...+++..+..++.|++.||.|||++||+||||||+||++    + .++.+||+|||++...
T Consensus       118 e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~kl~dfg~~~~~  190 (312)
T 2iwi_A          118 ERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI----DLRRGCAKLIDFGSGALL  190 (312)
T ss_dssp             ECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEE----ETTTTEEEECCCSSCEEC
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEE----eCCCCeEEEEEcchhhhc
Confidence            99 778887666554   2358888899999999999999999999999999999999    5 5679999999999988


Q ss_pred             CcccccceeecccCCCCccccC
Q psy11822        207 SKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .........||+.|+|||++.+
T Consensus       191 ~~~~~~~~~~~~~y~aPE~~~~  212 (312)
T 2iwi_A          191 HDEPYTDFDGTRVYSPPEWISR  212 (312)
T ss_dssp             CSSCBCCCCSCTTTSCHHHHHH
T ss_pred             ccCcccccCCcccccCceeeec
Confidence            7766667889999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.96  E-value=1.8e-31  Score=217.90  Aligned_cols=163  Identities=16%  Similarity=0.143  Sum_probs=127.0

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .+++.||+|.+.....     ......+.+|+.+++.++||||+  .+++++.  +....++|
T Consensus        36 G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv  106 (322)
T 1p4o_A           36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-----MRERIEFLNEASVMKEFNCHHVV--RLLGVVS--QGQPTLVI  106 (322)
T ss_dssp             CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHGGGCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             CCceEEEeeeecCccCCCCceEEEEEecccccC-----HHHHHHHHHHHHHHHhcCCCCEe--eeEEEEc--cCCccEEE
Confidence            999999999876     4678999999875321     12233568999999999999997  4454443  33457999


Q ss_pred             eeeeeCCCCCccCCCCC-------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        128 MEVTRRSQYTGATAPPP-------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~-------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      |||+++++|..++....       ....+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+||
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli----~~~~~~kl~Df  182 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDF  182 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCT
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE----cCCCeEEECcC
Confidence            99999999766654211       11245777888999999999999999999999999999999    78889999999


Q ss_pred             CcceecCcc----cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+++.....    ......||+.|+|||++.+
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (322)
T 1p4o_A          183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  214 (322)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             ccccccccccccccccCCCCCCCccChhhhcc
Confidence            999866433    2234578899999998753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=1.3e-30  Score=214.65  Aligned_cols=162  Identities=19%  Similarity=0.179  Sum_probs=107.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc--ccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC--NNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~--~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+..+|+.||+|++......       .   ......++.+.||||+  .+++++..  ......++||||
T Consensus        40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~---~e~~~~~~~~~h~~i~--~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           40 GVNGKVLECFHRRTGQKCALKLLYDSPKA-------R---QEVDHHWQASGGPHIV--CILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEESSHHH-------H---HHHHHHHHHTTSTTBC--CEEEEEEEEETTEEEEEEEEEC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEecCcHHH-------H---HHHHHHHHhcCCCChH--HHHHHHhhccCCCceEEEEEec
Confidence            99999999999999999999998653211       0   1111224556899997  44444432  223457899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++++|..++.... ...+++.+++.++.|++.||.|||++||+||||||+|||+... +..+.+||+|||+++......
T Consensus       108 ~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~-~~~~~~kl~Dfg~~~~~~~~~  185 (336)
T 3fhr_A          108 MEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK-EKDAVLKLTDFGFAKETTQNA  185 (336)
T ss_dssp             CTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-STTCCEEECCCTTCEEC----
T ss_pred             cCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec-CCCceEEEeccccceeccccc
Confidence            99999766655422 2358899999999999999999999999999999999999443 335579999999999877666


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       186 ~~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          186 LQTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             ------------------
T ss_pred             cccCCCCcCccChhhhCC
Confidence            667889999999999854

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=6.6e-31  Score=213.85  Aligned_cols=158  Identities=21%  Similarity=0.255  Sum_probs=127.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|.+...        ...+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        40 G~~g~Vy~~~~~~~~~~vaiK~~~~~--------~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~  107 (314)
T 3com_A           40 GSYGSVYKAIHKETGQIVAIKQVPVE--------SDLQEIIKEISIMQQCDSPHVV--KYYGSYF--KNTDLWIVMEYCG  107 (314)
T ss_dssp             ---CEEEEEEETTTCCEEEEEEEETT--------SCCHHHHHHHHHHHTCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEecCch--------HHHHHHHHHHHHHHhCCCCCCc--cEEEEEE--eCCEEEEEeecCC
Confidence            89999999999999999999998652        2234668899999999999997  4444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..++...  ...+++.++..++.|++.||.|||+.|++|+||||+||++    +.++.+||+|||++......  .
T Consensus       108 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          108 AGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL----NTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             TEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECBTTBSC
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE----CCCCCEEEeecccchhhhhhccc
Confidence            99977665421  2358888899999999999999999999999999999999    77889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       182 ~~~~~~~~~y~aPE~~~~  199 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQE  199 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSS
T ss_pred             cCccCCCCCccChhhcCC
Confidence            345689999999999865

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=2e-31  Score=219.95  Aligned_cols=157  Identities=24%  Similarity=0.266  Sum_probs=119.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC--ccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH--AFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+ .+++.||+|++......    ....+.+.+|+.+++.++|  |||+  .+++++.  +....++|||+
T Consensus        20 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~iv--~~~~~~~--~~~~~~lv~e~   90 (343)
T 3dbq_A           20 GGSSKVFQVLN-EKKQIYAIKYVNLEEAD----NQTLDSYRNEIAYLNKLQQHSDKII--RLYDYEI--TDQYIYMVMEC   90 (343)
T ss_dssp             CSSEEEEEEEC-TTSCEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEECC
T ss_pred             CCCeEEEEEEe-CCCCEEEEEEeeccccc----hHHHHHHHHHHHHHHhhhhcCCceE--EEeeeEe--eCCEEEEEEeC
Confidence            99999999997 46899999988643211    2233467899999999977  8887  4554443  34567999995


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                       .++++..++..   ...+++.++..++.|++.||.|||++||+||||||+|||+    + ++.+||+|||+++..... 
T Consensus        91 -~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll----~-~~~~kl~DFG~a~~~~~~~  161 (343)
T 3dbq_A           91 -GNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----V-DGMLKLIDFGIANQMQPDT  161 (343)
T ss_dssp             -CSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----E-TTEEEECCCSSSCCC----
T ss_pred             -CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE----E-CCcEEEeecccccccCccc
Confidence             55565555443   2458888899999999999999999999999999999999    4 358999999999877543 


Q ss_pred             ---cccceeecccCCCCcccc
Q psy11822        210 ---VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~  227 (229)
                         .....+||+.|+|||++.
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          162 TSVVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             --------CCCCSSCCHHHHH
T ss_pred             ccccCCCCcCCcCcCCHHHHh
Confidence               224568999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=6.9e-32  Score=216.04  Aligned_cols=166  Identities=20%  Similarity=0.210  Sum_probs=129.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|.+......    ....+.+.+|+.+++.++||||+  .+++++........++||||++
T Consensus        17 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~~~~~~~~~lv~e~~~   90 (279)
T 2w5a_A           17 GSYGRCQKIRRKSDGKILVWKELDYGSMT----EAEKQMLVSEVNLLRELKHPNIV--RYYDRIIDRTNTTLYIVMEYCE   90 (279)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEECTTCC----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEEEGGGTEEEEEEECCT
T ss_pred             CCCcEEEEEEECCCCcEEEEEEEEcccCC----HHHHHHHHHHHHHHHhcCCCCCC--eEEEEEecCCCceEEEEEeCCC
Confidence            99999999999999999999998653211    11234678999999999999997  4444443334456799999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCC-----CccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLG-----LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~-----iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +++|..++... .....+++..+..++.|++.||.|||+.+     |+||||||+||++    +.++.+||+|||++...
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~----~~~~~~kl~dfg~~~~~  166 (279)
T 2w5a_A           91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARIL  166 (279)
T ss_dssp             TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE----CSSSCEEECCCCHHHHC
T ss_pred             CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE----cCCCCEEEecCchheee
Confidence            98876665431 11234888889999999999999999999     9999999999999    77889999999999876


Q ss_pred             Ccc--cccceeecccCCCCccccC
Q psy11822        207 SKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...  ......||+.|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~~y~aPE~~~~  190 (279)
T 2w5a_A          167 NHDTSFAKTFVGTPYYMSPEQMNR  190 (279)
T ss_dssp             ---CHHHHHHHSCCTTCCHHHHHC
T ss_pred             ccccccccccCCCccccChHHhcc
Confidence            543  2235688999999999865

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.96  E-value=9.8e-31  Score=208.14  Aligned_cols=160  Identities=9%  Similarity=0.039  Sum_probs=128.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++.  ++.||+|+++.....    ....+.+.+|+.+++.++||||+  .+++++........++||||++
T Consensus        21 G~~g~V~~~~~~--~~~~avK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~lv~e~~~   92 (271)
T 3kmu_A           21 NHSGELWKGRWQ--GNDIVVKVLKVRDWS----TRKSRDFNEECPRLRIFSHPNVL--PVLGACQSPPAPHPTLITHWMP   92 (271)
T ss_dssp             ETTEEEEEEEET--TEEEEEEEECCTTCC----HHHHHHHHHHGGGGCCCSCTTEE--CEEEEECTTTSSSCEEEEECCT
T ss_pred             CCcceEEEEEEC--CeeEEEEEecccccC----HHHHHHHHHHHHHHHhcCCCchh--heEEEEccCCCCCeEeeecccC
Confidence            999999999985  899999998753211    11234678999999999999997  4555554443456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++|..++.... ...+++.++..++.|++.||.|||+++  |+||||||+||++    +.++.++|+|||++.....  
T Consensus        93 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~----~~~~~~~l~~~~~~~~~~~--  165 (271)
T 3kmu_A           93 YGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI----DEDMTARISMADVKFSFQS--  165 (271)
T ss_dssp             TCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE----CTTSCEEEEGGGSCCTTSC--
T ss_pred             CCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE----cCCcceeEEeccceeeecc--
Confidence            999777765522 224888899999999999999999999  9999999999999    7888999999998765433  


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                       ....||+.|+|||++.+
T Consensus       166 -~~~~~t~~y~aPE~~~~  182 (271)
T 3kmu_A          166 -PGRMYAPAWVAPEALQK  182 (271)
T ss_dssp             -TTCBSCGGGSCHHHHHS
T ss_pred             -cCccCCccccChhhhcc
Confidence             34678999999999865

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=5.6e-31  Score=223.54  Aligned_cols=158  Identities=34%  Similarity=0.384  Sum_probs=120.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc------cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL------NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|.+..+++.||||+++....       ....+.+|+++++.+      +|+||+  .+++.+.  .....++
T Consensus       108 G~fg~V~~a~~~~~~~~vAvK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~~iv--~~~~~~~--~~~~~~l  176 (429)
T 3kvw_A          108 GSFGQVVKAYDHKVHQHVALKMVRNEKR-------FHRQAAEEIRILEHLRKQDKDNTMNVI--HMLENFT--FRNHICM  176 (429)
T ss_dssp             SSSEEEEEEEETTTTEEEEEEEECSCHH-------HHHHHHHHHHHHHHHHTTCTTSCSCBC--CEEEEEE--ETTEEEE
T ss_pred             CccEEEEEEEECCCCcEEEEEEECCccc-------hHHHHHHHHHHHHHHhhccccCCcCEE--EEEeecc--cCCeEEE
Confidence            9999999999999999999999875321       112345566666665      566776  4444443  2345799


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCcc--EEEeecCcce
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYR--VKVIDFGSAS  204 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~--~kl~DFg~a~  204 (229)
                      ||||+.++.++.+... . ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.  +||+|||+|.
T Consensus       177 v~e~~~~~L~~~l~~~-~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl----~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          177 TFELLSMNLYELIKKN-K-FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL----KQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             EECCCCCBHHHHHHHT-T-TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEE----SSTTSCCEEECCCTTCE
T ss_pred             EEeccCCCHHHHHHhc-c-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----ccCCCcceEEeecccce
Confidence            9999986544333222 1 2348888899999999999999999999999999999999    66555  9999999998


Q ss_pred             ecCcccccceeecccCCCCccccC
Q psy11822        205 HVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..... ....+||+.|+|||++.+
T Consensus       251 ~~~~~-~~~~~gt~~y~aPE~~~~  273 (429)
T 3kvw_A          251 YEHQR-VYTYIQSRFYRAPEVILG  273 (429)
T ss_dssp             ETTCC-CCSSCSCGGGCCHHHHHT
T ss_pred             ecCCc-ccccCCCCCccChHHHhC
Confidence            66543 356789999999999865

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=7e-31  Score=224.21  Aligned_cols=157  Identities=19%  Similarity=0.172  Sum_probs=123.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.  |+.||||+++..        ...+.+.+|+.++++++||||+.  +++++.. .....++||||++
T Consensus       204 G~fg~V~~~~~~--~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~h~niv~--~~~~~~~-~~~~~~iv~e~~~  270 (450)
T 1k9a_A          204 GEFGDVMLGDYR--GNKVAVKCIKND--------ATAQAFLAEASVMTQLRHSNLVQ--LLGVIVE-EKGGLYIVTEYMA  270 (450)
T ss_dssp             CSSEEEEEEEET--TEEEEEEEESSC--------TTSHHHHHHHHHHHTCCCTTBCC--EEEEEEC-TTSCEEEEEECCT
T ss_pred             cCCeeEEEEEec--CCeEEEEEeCCc--------hHHHHHHHHHHHHHhccCCCEEE--EEEEEEc-CCCceEEEEEecC
Confidence            999999999975  789999998753        13456789999999999999984  4444322 2235799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|+|..++.... ...+++..+..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||+++...... .
T Consensus       271 ~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~-~  344 (450)
T 1k9a_A          271 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-D  344 (450)
T ss_dssp             TCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----CCCCCEEEeeCCCcccccccc-c
Confidence            999776655421 1236777889999999999999999999999999999999    778899999999998665432 3


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...+++.|+|||++.+
T Consensus       345 ~~~~~~~y~aPE~~~~  360 (450)
T 1k9a_A          345 TGKLPVKWTAPEALRE  360 (450)
T ss_dssp             --CCCTTTSCHHHHHS
T ss_pred             CCCCCcceeCHHHhcC
Confidence            3467889999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=2.9e-31  Score=219.88  Aligned_cols=163  Identities=23%  Similarity=0.268  Sum_probs=118.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc-----ccccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN-----NVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~-----~~~~~~lv  127 (229)
                      |+||.||+|++..+|+.||||++...       ........++++.++.++||||+.  +++++...     .....++|
T Consensus        34 G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~~~l~~l~h~niv~--~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           34 GTFGTVQLGKEKSTGMSVAIKKVIQD-------PRFRNRELQIMQDLAVLHHPNIVQ--LQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             -----CEEEEETTTCCEEEEEEEECC-------TTCCCHHHHHHHHHHHHCCTTBCC--EEEEEEEECSSCTTCEEEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEecC-------ccccHHHHHHHHHHHhcCCCCccc--HHHhhhccccccccceeEEEE
Confidence            89999999999999999999987542       122234466777788889999984  44444221     12236899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH--HCCCccccCCCCCeeeeCCCCC-CccEEEeecCcce
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK--QLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSAS  204 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH--~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~  204 (229)
                      |||++++.+..+.........+++..+..++.|++.||.|||  ++||+||||||+|||+    +. ++.+||+|||+++
T Consensus       105 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll----~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          105 MEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV----NEADGTLKLCDFGSAK  180 (360)
T ss_dssp             EECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEE----ETTTTEEEECCCTTCB
T ss_pred             eecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEE----eCCCCcEEEeeCCCce
Confidence            999998753322211111345777788899999999999999  9999999999999999    54 6799999999998


Q ss_pred             ecCcc-cccceeecccCCCCccccC
Q psy11822        205 HVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..... ......||+.|+|||++.+
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~  205 (360)
T 3e3p_A          181 KLSPSEPNVAYICSRYYRAPELIFG  205 (360)
T ss_dssp             CCCTTSCCCSTTSCGGGCCHHHHTT
T ss_pred             ecCCCCCcccccCCcceeCHHHHcC
Confidence            77654 3345688999999999854

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=3.2e-31  Score=219.91  Aligned_cols=166  Identities=24%  Similarity=0.298  Sum_probs=119.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHH-----HHHhhhhhhhhccccccccccCccccceehhhhhhc---cccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDL-----LKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC---NNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~---~~~~~~  124 (229)
                      |+||.||+|.+.. |+.||||++.......     .......+.+.+|+.+++.++||||+  .+++++..   ......
T Consensus        33 G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~  109 (362)
T 3pg1_A           33 GSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL--GLRDIFVHFEEPAMHKL  109 (362)
T ss_dssp             ETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC--CCSEEEEECCTTTCCEE
T ss_pred             CCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc--ceeeeEEeccCCCcceE
Confidence            9999999999854 9999999875421100     00011235678999999999999997  44444422   223457


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      ++||||++++++..+...   ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++
T Consensus       110 ~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg~~~  182 (362)
T 3pg1_A          110 YLVTELMRTDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL----ADNNDITICDFNLAR  182 (362)
T ss_dssp             EEEEECCSEEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCTTC--
T ss_pred             EEEEccCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE----cCCCCEEEEecCccc
Confidence            999999997655555433   3358888899999999999999999999999999999999    778899999999998


Q ss_pred             ecCcc-cccceeecccCCCCccccC
Q psy11822        205 HVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..... ......||+.|+|||++.+
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          183 EDTADANKTHYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             -------------CGGGCCHHHHTT
T ss_pred             ccccccccceecccceecCcHHhcC
Confidence            65443 3355789999999998865

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=3e-31  Score=222.57  Aligned_cols=158  Identities=23%  Similarity=0.255  Sum_probs=120.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc--Cccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN--HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+.. ++.||||++......    ....+.+.+|+.+++.+.  ||||+  .+++++.  ....+|+||| 
T Consensus        67 G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~----~~~~~~~~~Ei~~l~~l~~~~~~iv--~~~~~~~--~~~~~~lv~E-  136 (390)
T 2zmd_A           67 GGSSKVFQVLNEK-KQIYAIKYVNLEEAD----NQTLDSYRNEIAYLNKLQQHSDKII--RLYDYEI--TDQYIYMVME-  136 (390)
T ss_dssp             CSSEEEEEEECTT-CCEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEEE-
T ss_pred             CCCeEEEEEEcCC-CCEEEEEEEeccccc----HHHHHHHHHHHHHHHHcccCCCeEE--EEEEEEe--cCCEEEEEEe-
Confidence            9999999999864 899999998653211    223456789999999996  58887  4444443  3345899999 


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.+++|..++..   ...+++.++..++.||+.||.|||++||+||||||+|||+    +. +.+||+|||+++..... 
T Consensus       137 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll----~~-~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          137 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VD-GMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEE----SS-SCEEECCCSSSCCC----
T ss_pred             cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE----EC-CeEEEEecCccccccCCC
Confidence            566666555444   2357777889999999999999999999999999999999    43 58999999999877543 


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         .....+||+.|+|||++.+
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHC
T ss_pred             ccccCCCCCcCCCccChHHhhh
Confidence               2345689999999999854

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=5.9e-31  Score=215.18  Aligned_cols=161  Identities=22%  Similarity=0.286  Sum_probs=123.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccc----cccccee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNN----VKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~----~~~~~lv  127 (229)
                      |+||.||+|++..+|+.||+|++...       ....+.+.+|+.+++.+ .||||+.  +++++....    ....++|
T Consensus        35 G~~g~Vy~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~e~~~l~~l~~h~~i~~--~~~~~~~~~~~~~~~~~~lv  105 (326)
T 2x7f_A           35 GTYGQVYKGRHVKTGQLAAIKVMDVT-------GDEEEEIKQEINMLKKYSHHRNIAT--YYGAFIKKNPPGMDDQLWLV  105 (326)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECC-------SSTTHHHHHHHHHHHHHCCSTTBCC--EEEEEEECC--CCCCEEEEE
T ss_pred             CCCEEEEEEEECCCCCeEEEEEEecC-------cccHHHHHHHHHHHHhccCCCCeee--eeeEEeeccCccccceEEEE
Confidence            89999999999999999999998642       12334668899999998 8999974  444443221    3467999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++++|..++.... ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++....
T Consensus       106 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~----~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCTTTC---
T ss_pred             EEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE----cCCCCEEEeeCcCceecC
Confidence            99999998766654321 2357788889999999999999999999999999999999    778899999999998765


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ..  ......||+.|+|||++.
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          181 RTVGRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             ----------CCGGGCCHHHHC
T ss_pred             cCccccccccCCccccChhhhc
Confidence            43  334568999999999985

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=4.5e-31  Score=214.20  Aligned_cols=165  Identities=17%  Similarity=0.135  Sum_probs=129.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|.+  +++.||+|++......  ......+.+.+|+.+++.++||||+  .+++++.  +....++||||+
T Consensus        41 ~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~  112 (307)
T 2nru_A           41 EGGFGVVYKGYV--NNTTVAVKKLAAMVDI--TTEELKQQFDQEIKVMAKCQHENLV--ELLGFSS--DGDDLCLVYVYM  112 (307)
T ss_dssp             ECSSEEEEEEES--SSCEEEEEEECCCTTS--CTTTHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEEEECC
T ss_pred             cCCCeEEEEEEE--CCceEEEEEEecccCc--chHHHHHHHHHHHHHHHhcCCCCeE--EEEEEEe--cCCceEEEEEec
Confidence            499999999987  4889999987642100  0112344678999999999999997  4444443  334579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      +++++..++........+++..++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL----DEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECCSCSS
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE----cCCCcEEEeecccccccccccc
Confidence            999976665432223458888889999999999999999999999999999999    78889999999999876542  


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|+|||++.+
T Consensus       189 ~~~~~~~~g~~~y~aPE~~~~  209 (307)
T 2nru_A          189 TVMTSRIVGTTAYMAPEALRG  209 (307)
T ss_dssp             CEECSSCCSCGGGCCHHHHTT
T ss_pred             cccccccCCCcCcCChHHhcC
Confidence              2234679999999998765

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=3e-31  Score=213.82  Aligned_cols=165  Identities=19%  Similarity=0.169  Sum_probs=128.5

Q ss_pred             ecccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         49 FNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      ..+.|+||.||+|.+..++..||+|.++...      ....+.+.+|+.+++.++||||+  .+++++.  .....++||
T Consensus        29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~   98 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD------SRYSQPLHEEIALHKHLKHKNIV--QYLGSFS--ENGFIKIFM   98 (295)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECCC------C---HHHHHHHHHHHTCCCTTBC--CEEEEEE--ETTEEEEEE
T ss_pred             EEeecCcEEEEEEEECCCCeEEEEEEccCCc------hHHHHHHHHHHHHHHhCCCCCEe--eEeeEEE--eCCcEEEEE
Confidence            3344999999999999999999999886531      12234678899999999999997  4444443  334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~  207 (229)
                      ||++++++..++........+++..+..++.|++.||.|||++||+||||||+||++    +. ++.+||+|||++....
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI----NTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTTCCEEECCTTTCEESC
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEE----ECCCCCEEEeecccccccC
Confidence            999999977665543222345566778899999999999999999999999999999    54 6799999999998775


Q ss_pred             cc--cccceeecccCCCCcccc
Q psy11822        208 KA--VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~--~~~~~~gt~~y~aPE~l~  227 (229)
                      ..  ......||+.|+|||++.
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~  196 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIID  196 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHH
T ss_pred             CCCCcccccCCCccccChhhhc
Confidence            42  234568999999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=5e-31  Score=219.71  Aligned_cols=165  Identities=16%  Similarity=0.114  Sum_probs=111.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc--cCccccce--ehh---hhhhccc-----
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL--NHAFVTLA--HLV---DYAHCNN-----  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~h~ni~~~--~~~---~~~~~~~-----  120 (229)
                      |+||.||+|++..+|+.||+|++.......   ....+.+.+|+.+++.+  +||||+..  .++   +.+....     
T Consensus        73 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~  149 (371)
T 3q60_A           73 GDRSVVFLVRDVERLEDFALKVFTMGAENS---RSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFA  149 (371)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEECCSTTH---HHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSS
T ss_pred             CCCEEEEEEEECCCCceeEEEEEEeccccc---ccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCee
Confidence            999999999999999999999988632211   12233556775444444  69998631  111   1221111     


Q ss_pred             ----------ccccceeeeeeeCCCCCccCCCCCCCCccccCCc------cchHHHHHHHHHHHHHCCCccccCCCCCee
Q psy11822        121 ----------VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPP------GNVTLQVLTALLKLKQLGLIHADLKPENIM  184 (229)
Q Consensus       121 ----------~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~------~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil  184 (229)
                                ...+++||||++ ++|..++...  ...+++...      ..++.||+.||+|||++||+||||||+|||
T Consensus       150 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIl  226 (371)
T 3q60_A          150 QLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLF  226 (371)
T ss_dssp             BCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             eccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEE
Confidence                      134799999999 6765554431  112333333      466699999999999999999999999999


Q ss_pred             eeCCCCCCccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        185 LVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       185 ~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +    +.++.+||+|||+|+...... ....+|+.|+|||++.+
T Consensus       227 l----~~~~~~kL~DFG~a~~~~~~~-~~~~~t~~y~aPE~~~~  265 (371)
T 3q60_A          227 I----MPDGRLMLGDVSALWKVGTRG-PASSVPVTYAPREFLNA  265 (371)
T ss_dssp             E----CTTSCEEECCGGGEEETTCEE-EGGGSCGGGCCHHHHTC
T ss_pred             E----CCCCCEEEEecceeeecCCCc-cCccCCcCCcChhhccC
Confidence            9    888899999999999775543 24566799999999865

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.96  E-value=5e-31  Score=218.20  Aligned_cols=166  Identities=14%  Similarity=0.145  Sum_probs=126.8

Q ss_pred             cceeeccc---CCceeeeeeecCCC--------CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcccccee--
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEG--------GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAH--  111 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~--  111 (229)
                      .+|.+...   |+||.||+|++..+        ++.||+|++...           +.+.+|+.+++.++||||+...  
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~~  110 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----------GRLFNEQNFFQRAAKPLQVNKWKK  110 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----------STHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----------chHHHHHHHHHHhcccchhhhhhh
Confidence            34444333   99999999999874        889999997652           2568899999999999997311  


Q ss_pred             -----------hhhhhhcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCC
Q psy11822        112 -----------LVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKP  180 (229)
Q Consensus       112 -----------~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp  180 (229)
                                 ++++... .....++||||+ +++|..++.... ...+++.+++.++.|++.||.|||++||+||||||
T Consensus       111 ~~~~~~~~i~~~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp  187 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVH-QDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTA  187 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEE-TTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCG
T ss_pred             hccCCccCccchhhcccc-CCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCH
Confidence                       1212211 235679999999 888777665421 24688999999999999999999999999999999


Q ss_pred             CCeeeeCCCCCCc--cEEEeecCcceecCccc---------ccceeecccCCCCccccC
Q psy11822        181 ENIMLVDPVRQPY--RVKVIDFGSASHVSKAV---------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       181 ~Nil~~~~~~~~~--~~kl~DFg~a~~~~~~~---------~~~~~gt~~y~aPE~l~~  228 (229)
                      +|||+    +.++  .+||+|||+++.+....         .....||+.|+|||++.+
T Consensus       188 ~NIl~----~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          188 ENIFV----DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             GGEEE----ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHEEE----cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence            99999    6666  99999999998765431         134589999999999875

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.96  E-value=9.5e-31  Score=211.41  Aligned_cols=162  Identities=23%  Similarity=0.285  Sum_probs=125.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++.....    ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        14 G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   85 (299)
T 2r3i_A           14 GTYGVVYKARNKLTGEVVALKKIRLDTET----EGVPSTAIREISLLKELNHPNIV--KLLDVIH--TENKLYLVFEFLH   85 (299)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEC------------CCHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCeeEEEEEEcCCCceEEEEEeecCccc----hhhHHHHHHHHHHHHHcCCCCee--eEEEEEe--cCCceEEEEEccc
Confidence            99999999999999999999998764321    22334668899999999999997  4555544  3345799999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      + ++..+..... ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......  .
T Consensus        86 ~-~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~dfg~~~~~~~~~~~  159 (299)
T 2r3i_A           86 Q-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRT  159 (299)
T ss_dssp             E-EHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECSTTHHHHHCCCSBC
T ss_pred             C-CHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE----cCCCCEEECcchhhhhccCCccc
Confidence            5 4433332211 1347777889999999999999999999999999999999    78889999999999876543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~  177 (299)
T 2r3i_A          160 YTHEVVTLWYRAPEILLG  177 (299)
T ss_dssp             TTSCBCCCTTCCHHHHTT
T ss_pred             cCcccccccccCcHHhhc
Confidence            345688999999999865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=1.1e-30  Score=210.62  Aligned_cols=161  Identities=17%  Similarity=0.186  Sum_probs=126.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++...        ...+.+.+|+.+++.++|++++.  .+... .......++||||+ 
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~e~~~l~~l~~~~~i~--~~~~~-~~~~~~~~lv~e~~-   87 (296)
T 3uzp_A           20 GSFGDIYLGTDIAAGEEVAIKLECVK--------TKHPQLHIESKIYKMMQGGVGIP--TIRWC-GAEGDYNVMVMELL-   87 (296)
T ss_dssp             ETTEEEEEEEETTTTEEEEEEEEESC--------SSCCHHHHHHHHHHHHTTSTTCC--CEEEE-EEETTEEEEEEECC-
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEecCC--------cchhHHHHHHHHHHHhhcCCCCC--ccccc-cCCCCceEEEEEec-
Confidence            89999999999999999999987642        12335688999999999887652  22222 12334578999999 


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +++|..+....  ...+++.++..++.|++.||.|||++||+||||||+|||+... +.++.+||+|||++.......  
T Consensus        88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC-CCCCeEEEeeCCCcccccccccc
Confidence            77766654421  2358888999999999999999999999999999999999422 256799999999998775432  


Q ss_pred             -------ccceeecccCCCCccccC
Q psy11822        211 -------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -------~~~~~gt~~y~aPE~l~~  228 (229)
                             .....||+.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             cccccccccccccccccCChhhhcC
Confidence                   245689999999999876

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=8.1e-32  Score=220.25  Aligned_cols=165  Identities=21%  Similarity=0.253  Sum_probs=130.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc--Cccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN--HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|++..+++.||+|+++...............+.+|+.+++.+.  |+||+  .+++++.  .....++|||+
T Consensus        54 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~--~~~~~~~--~~~~~~lv~e~  129 (320)
T 3a99_A           54 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI--RLLDWFE--RPDSFVLILER  129 (320)
T ss_dssp             SSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBC--CEEEEEE--CSSEEEEEEEC
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCce--EEEEEEe--cCCcEEEEEEc
Confidence            899999999999999999999987642111000112345678999999996  58887  4555544  33457999999


Q ss_pred             eeC-CCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC-CCccEEEeecCcceecCc
Q psy11822        131 TRR-SQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR-QPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       131 ~~~-~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~-~~~~~kl~DFg~a~~~~~  208 (229)
                      +.+ +++..++..   ...+++..+..++.|++.||.|||++||+||||||+|||+    + ..+.+||+|||+++....
T Consensus       130 ~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----~~~~~~~kL~Dfg~~~~~~~  202 (320)
T 3a99_A          130 PEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKD  202 (320)
T ss_dssp             CSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTTTEEEECCCTTCEECCS
T ss_pred             CCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEE----eCCCCCEEEeeCcccccccc
Confidence            986 666555443   2357888889999999999999999999999999999999    5 567999999999998877


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      .......||+.|+|||++.+
T Consensus       203 ~~~~~~~gt~~y~aPE~~~~  222 (320)
T 3a99_A          203 TVYTDFDGTRVYSPPEWIRY  222 (320)
T ss_dssp             SCBCCCCSCGGGSCHHHHHH
T ss_pred             ccccCCCCCccCCChHHhcc
Confidence            66667789999999998753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=6.3e-31  Score=215.38  Aligned_cols=162  Identities=19%  Similarity=0.181  Sum_probs=127.2

Q ss_pred             CCceeeeeee----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPT----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|+    +..+|+.||+|++....      ....+.+.+|+.+++.++||||+.  +++++........++||
T Consensus        52 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~lv~  123 (326)
T 2w1i_A           52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHST------EEHLRDFEREIEILKSLQHDNIVK--YKGVCYSAGRRNLKLIM  123 (326)
T ss_dssp             CSSEEEEEEEECTTSSSCCEEEEEEEESSCC------SHHHHHHHHHHHHHHTCCCTTBCC--EEEEECC----CCEEEE
T ss_pred             CCCeEEEEEEeccccCCCceEEEEEEeccCC------HHHHHHHHHHHHHHHhCCCCCeee--EEEEEEecCCCceEEEE
Confidence            9999999998    46689999999987531      223346789999999999999974  44444333334678999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++...  ...+++.+++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||++.....
T Consensus       124 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          124 EYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV----ENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             CCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCS
T ss_pred             ECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----cCCCcEEEecCcchhhccc
Confidence            999999977765542  1347888889999999999999999999999999999999    7777999999999988754


Q ss_pred             cc-----ccceeecccCCCCccccC
Q psy11822        209 AV-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      ..     .....++..|+|||++.+
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~  222 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTE  222 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcC
Confidence            32     233567778999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=7.3e-31  Score=213.54  Aligned_cols=164  Identities=19%  Similarity=0.130  Sum_probs=127.3

Q ss_pred             CCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++     ..+++.||+|+++....     ......+.+|+.+++.+ +||||+  .+++++.. .....++
T Consensus        38 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv--~~~~~~~~-~~~~~~l  109 (316)
T 2xir_A           38 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-----HSEHRALMSELKILIHIGHHLNVV--NLLGACTK-PGGPLMV  109 (316)
T ss_dssp             CSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEECC-TTSCCEE
T ss_pred             CCceeEEEEEEecCCccccceEEEEEecccCCC-----cHHHHHHHHHHHHHHhcccCCCee--eEEEEEec-CCCceEE
Confidence            99999999984     45789999999875321     11233568899999999 799997  44444332 2234799


Q ss_pred             eeeeeeCCCCCccCCCCCC-------------CCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        127 MMEVTRRSQYTGATAPPPP-------------AQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~-------------~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      ||||+++++|..++.....             ...+++..+..++.|++.||.|||++||+||||||+||++    +.++
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~----~~~~  185 (316)
T 2xir_A          110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKN  185 (316)
T ss_dssp             EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGG
T ss_pred             EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCC
Confidence            9999999987666554221             1127778889999999999999999999999999999999    7788


Q ss_pred             cEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+++.....    ......||+.|+|||++.+
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  224 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  224 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence            9999999999876442    2345678899999998753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=6.3e-31  Score=211.98  Aligned_cols=160  Identities=16%  Similarity=0.150  Sum_probs=124.8

Q ss_pred             CCceeeeeee--cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPT--DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.  ...+++.||+|+++.....    ....+.+.+|+.+++.++||||+  .+++++   .....++||||
T Consensus        28 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~---~~~~~~lv~e~   98 (291)
T 1xbb_A           28 GNFGTVKKGYYQMKKVVKTVAVKILKNEAND----PALKDELLAEANVMQQLDNPYIV--RMIGIC---EAESWMLVMEM   98 (291)
T ss_dssp             CSSEEEEEEEEECSSSEEEEEEEEEC---------CHHHHHHHHHHHHHHTCCCTTBC--CEEEEE---ESSSEEEEEEC
T ss_pred             ccCeeeEeeeecCCCceeeEEEEeecccccC----HHHHHHHHHHHHHHHhCCCCCEE--EEEEEE---CCCCcEEEEEe
Confidence            9999999994  4567899999998764321    22345678999999999999997  444444   23457899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV  210 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~  210 (229)
                      +++++|..++..   ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++.......
T Consensus        99 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           99 AELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             CTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTTC
T ss_pred             CCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEE----eCCCcEEEccCCcceeeccCC
Confidence            999997776654   2358888899999999999999999999999999999999    677799999999998775431


Q ss_pred             -----ccceeecccCCCCccccC
Q psy11822        211 -----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -----~~~~~gt~~y~aPE~l~~  228 (229)
                           .....+|+.|+|||++.+
T Consensus       172 ~~~~~~~~~~~~~~y~aPE~~~~  194 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPECINY  194 (291)
T ss_dssp             SEEEC----CCCGGGCCHHHHHH
T ss_pred             CcccccccCCCCceeeChHHhcc
Confidence                 123456788999998753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=8.9e-31  Score=213.10  Aligned_cols=166  Identities=13%  Similarity=0.092  Sum_probs=117.9

Q ss_pred             CCceeeeeeecCC---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc---cccce
Q psy11822         53 DDIGQVNVPTDLE---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV---KASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~---~~~~l  126 (229)
                      |+||.||+|++..   ++..||+|.++.....    ....+.+.+|+.+++.++||||+  .+++++.....   ...++
T Consensus        45 G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~~~~~~~~~~~~~  118 (313)
T 3brb_A           45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS----QREIEEFLSEAACMKDFSHPNVI--RLLGVCIEMSSQGIPKPMV  118 (313)
T ss_dssp             -CCCCEEEEEEECTTSCEEEEEEEEC---CCC----HHHHHHHHHHHHHHHTCCCTTBC--CCCEEEEC-------CEEE
T ss_pred             cCCeEEEEEEEeccCCceeEEEEEEEeccccc----hhHHHHHHHHHHHHhcCCCCCee--eeeEEEeeccccCCcccEE
Confidence            9999999997654   5679999998753211    12234678999999999999997  44444433222   24589


Q ss_pred             eeeeeeCCCCCccCCC---CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        127 MMEVTRRSQYTGATAP---PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~---~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      ||||++++++..++..   ......+++.+++.++.|++.||.|||++||+||||||+||++    +.++.+||+|||++
T Consensus       119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli----~~~~~~kl~Dfg~~  194 (313)
T 3brb_A          119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML----RDDMTVCVADFGLS  194 (313)
T ss_dssp             EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE----CTTSCEEECSCSCC
T ss_pred             EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEEeecCcc
Confidence            9999999997655411   1123458888999999999999999999999999999999999    78889999999999


Q ss_pred             eecCcc----cccceeecccCCCCccccC
Q psy11822        204 SHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......    ......+++.|+|||++.+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  223 (313)
T 3brb_A          195 KKIYSGDYYRQGRIAKMPVKWIAIESLAD  223 (313)
T ss_dssp             ----------------CCGGGSCHHHHHS
T ss_pred             eecccccccCcccccCCCccccCchhhcC
Confidence            876443    2234567889999999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.96  E-value=3.4e-30  Score=227.27  Aligned_cols=168  Identities=24%  Similarity=0.254  Sum_probs=133.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+|+.||+|+++....     ....+.+.+|+.+++.++||||+.  +++++..    ......++||
T Consensus        25 G~fG~Vyla~~~~tg~~VAVKvi~~~~~-----~~~~~~~~~Ei~iL~~L~HpnIV~--l~~v~~~~~~~~~~~~~~LVm   97 (676)
T 3qa8_A           25 GGFGYVLRWIHQDTGEQVAIKQCRQELS-----PKNRERWCLEIQIMKKLNHPNVVS--AREVPDGLQKLAPNDLPLLAM   97 (676)
T ss_dssp             CSSSBCCCCCCTTTTCCEEECCCCSCCC-----HHHHHHHHHHHHHHHHCCBTTBCC--EEECCTTTCCCCTTSSCCCEE
T ss_pred             CCCeEEEEEEECCCCcEEEEEEecccCC-----HHHHHHHHHHHHHHHhCCCCCCCc--eeeeecccccccCCCeEEEEE
Confidence            9999999999999999999999865311     122346788999999999999984  3333222    2245579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++........+++..+..++.|++.||.|||+.||+||||||+||++... +....+||+|||++.....
T Consensus        98 Ey~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~-g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A           98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG-PQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             ECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC-SSSCEEEECSCCCCCBTTS
T ss_pred             EeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC-CCceeEEEccccccccccc
Confidence            999999987776654444468999999999999999999999999999999999999543 2334699999999988765


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . ......||+.|+|||++.+
T Consensus       177 ~~~~~~~~gt~~Y~APE~l~~  197 (676)
T 3qa8_A          177 GELCTEFVGTLQYLAPELLEQ  197 (676)
T ss_dssp             CCCCCCCCSCCTTCSSCSSCC
T ss_pred             ccccccccCCcccCChHHhcc
Confidence            4 3355789999999999865

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=1.2e-30  Score=211.03  Aligned_cols=162  Identities=20%  Similarity=0.209  Sum_probs=111.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+++.||+|++.....     ....+.+.+|+.+++.++||||+.  +++++.  .....++||||++
T Consensus        26 G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~--~~~~~~--~~~~~~lv~e~~~   96 (303)
T 2vwi_A           26 GATAVVQAAYCAPKKEKVAIKRINLEKC-----QTSMDELLKEIQAMSQCHHPNIVS--YYTSFV--VKDELWLVMKLLS   96 (303)
T ss_dssp             --CCCEEEEEC----CEEEEECCC---------------------CCCCCCCTTBCC--EEEEEE--SSSCEEEEEECCT
T ss_pred             ccceEEEEEEECCCCcEEEEEEEEhhhc-----chhHHHHHHHHHHHhhcCCCCEee--EEEEEe--ecCCcEEEehhcc
Confidence            8999999999988999999999876422     223446789999999999999974  444443  3345799999999


Q ss_pred             CCCCCccCCC-----CCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        133 RSQYTGATAP-----PPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       133 ~~~l~~~~~~-----~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ++++..++..     ......+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++....
T Consensus        97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~----~~~~~~kl~dfg~~~~~~  172 (303)
T 2vwi_A           97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL----GEDGSVQIADFGVSAFLA  172 (303)
T ss_dssp             TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTCCEEECCCHHHHHCC
T ss_pred             CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE----cCCCCEEEEeccchheec
Confidence            9986655431     1113458888899999999999999999999999999999999    778899999999997664


Q ss_pred             cc-------cccceeecccCCCCcccc
Q psy11822        208 KA-------VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       208 ~~-------~~~~~~gt~~y~aPE~l~  227 (229)
                      ..       ......||+.|+|||++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (303)
T 2vwi_A          173 TGGDITRNKVRKTFVGTPCWMAPEVME  199 (303)
T ss_dssp             ---------------CCCTTCCHHHHH
T ss_pred             cCCCccchhhhcccCCCccccCHHHhc
Confidence            32       123468999999999874

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=1.2e-30  Score=210.81  Aligned_cols=162  Identities=19%  Similarity=0.105  Sum_probs=123.8

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+   +..+|+|.+.....     ....+.+.+|+.++++++||||+  .+++++.. .....++|||
T Consensus        36 G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~-~~~~~~~v~e  107 (298)
T 3f66_A           36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-----IGEVSQFLTEGIIMKDFSHPNVL--SLLGICLR-SEGSPLVVLP  107 (298)
T ss_dssp             ETTEEEEEEEEC-----CEEEEEEEETTCCS-----HHHHHHHHHHHHHHHTCCCTTBC--CCCEEECC-SSSCCEEEEE
T ss_pred             cCCceEEEEEEecCCCceeEEEEEecccCCC-----HHHHHHHHHHHHHHHhCCCCCEe--eeeeEEEc-CCCceEEEEe
Confidence            99999999997543   34689998765211     12234678999999999999997  45544322 2345689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++.....
T Consensus       108 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          108 YMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             CCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSCGGGCCCSCG
T ss_pred             CCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----CCCCCEEECccccccccccc
Confidence            99999977765442  2347778889999999999999999999999999999999    88889999999999876442


Q ss_pred             ------cccceeecccCCCCccccC
Q psy11822        210 ------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ------~~~~~~gt~~y~aPE~l~~  228 (229)
                            ......||+.|+|||++.+
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~  206 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQT  206 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHH
T ss_pred             chhccccccCCCCCccccChHHhcC
Confidence                  2234577889999998754

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=1.2e-30  Score=215.59  Aligned_cols=160  Identities=24%  Similarity=0.312  Sum_probs=123.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc---ccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC---NNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+|+.||||++.....     ......+.+|+.+++.++||||+.  ++++...   ......++|||
T Consensus        22 G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~lv~e   94 (353)
T 2b9h_A           22 GAYGVVCSATHKPTGEIVAIKKIEPFDK-----PLFALRTLREIKILKHFKHENIIT--IFNIQRPDSFENFNEVYIIQE   94 (353)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECCCSS-----HHHHHHHHHHHHHHHHCCCTTBCC--EEEECCCSCSTTCCCEEEEEC
T ss_pred             CCCeEEEEEEECCCCcEEEEEeeccccc-----chHHHHHHHHHHHHHhCcCCCcCC--eeeeecccccCccceEEEEEe
Confidence            9999999999999999999999864211     112335578999999999999984  3333321   12345799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+.+ ++......    ..+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus        95 ~~~~-~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~----~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           95 LMQT-DLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----NSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             CCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECC--
T ss_pred             ccCc-cHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----cCCCcEEEEecccccccccc
Confidence            9986 44444332    358888899999999999999999999999999999999    78889999999999877532


Q ss_pred             c------------ccceeecccCCCCccccC
Q psy11822        210 V------------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~------------~~~~~gt~~y~aPE~l~~  228 (229)
                      .            ....+||+.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHS
T ss_pred             cccccCccccccchhhccccccccCCeeecc
Confidence            1            123578999999998753

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=1.6e-30  Score=211.26  Aligned_cols=173  Identities=17%  Similarity=0.153  Sum_probs=121.1

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV  121 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~  121 (229)
                      ..|.+...   |+||.||+|.+..+|+.||+|+++.....   .....+.+.+|+.+++.++||||+.  +++++.  ..
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~--~~  104 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM---DAKARADCIKEIDLLKQLNHPNVIK--YYASFI--ED  104 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC---CHHHHHHHHHHHHHHHTCCCTTBCC--EEEEEE--ET
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc---CHHHHHHHHHHHHHHHhCCCCCEee--EEEEEE--cC
Confidence            34444333   99999999999999999999987642110   0122345688999999999999974  444433  33


Q ss_pred             cccceeeeeeeCCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        122 KASVQMMEVTRRSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ...++||||+++++|..++... .....+++.++..++.|++.||.|||++|++||||||+||++    +.++.+||+||
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~----~~~~~~kl~Df  180 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI----TATGVVKLGDL  180 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCC
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE----cCCCCEEEEec
Confidence            4679999999999976654321 112357888889999999999999999999999999999999    77889999999


Q ss_pred             CcceecCcc--cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      |++......  ......||+.|+|||++.+
T Consensus       181 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (310)
T 2wqm_A          181 GLGRFFSSKTTAAHSLVGTPYYMSPERIHE  210 (310)
T ss_dssp             ------------------CCSSCCHHHHTT
T ss_pred             cceeeecCCCccccccCCCeeEeChHHhCC
Confidence            999876543  2345689999999998865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=3e-31  Score=234.92  Aligned_cols=161  Identities=16%  Similarity=0.138  Sum_probs=125.4

Q ss_pred             cCCceeeeeeec--CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTD--LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+  ..+++.||||+++....    .....+.+.+|+.+++.++||||+  .+++++.   ....++|||
T Consensus       379 ~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~~E~~il~~l~hpnIv--~l~~~~~---~~~~~lv~E  449 (635)
T 4fl3_A          379 SGNFGTVKKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQLDNPYIV--RMIGICE---AESWMLVME  449 (635)
T ss_dssp             ECSSEEEEEEEEECSSCEEEEEEEEECGGGG----CGGGHHHHHHHHHHHHHCCCTTBC--CEEEEEE---SSSEEEEEE
T ss_pred             cCCCEEEEEEEEcCCCcceEEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCEe--eEEEEEe---cCCEEEEEE
Confidence            399999999954  45688999999876421    122345789999999999999998  4455443   234789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|..++..   ...+++.++..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.+...
T Consensus       450 ~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl----~~~~~~kL~DFGla~~~~~~  522 (635)
T 4fl3_A          450 MAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRAD  522 (635)
T ss_dssp             CCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCTTHHHHTTC-
T ss_pred             ccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE----eCCCCEEEEEcCCccccccC
Confidence            9999997776654   3458888899999999999999999999999999999999    77789999999999877543


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......+|+.|+|||++.+
T Consensus       523 ~~~~~~~~~~~~t~~y~APE~~~~  546 (635)
T 4fl3_A          523 ENYYKAQTHGKWPVKWYAPECINY  546 (635)
T ss_dssp             ------------CGGGSCHHHHHH
T ss_pred             ccccccccCCCCceeeeChhhhcC
Confidence                 1234466788999998753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=5.9e-31  Score=211.75  Aligned_cols=164  Identities=20%  Similarity=0.289  Sum_probs=130.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++......    ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        33 G~~g~V~~~~~~~~~~~valK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~  104 (287)
T 2wei_A           33 GSFGEVLKCKDRITQQEYAVKVINKASAK----NKDTSTILREVELLKKLDHPNIM--KLFEILE--DSSSFYIVGELYT  104 (287)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEGGGBS----SSCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCEEEEEEEEcCCCcEEEEEEecccccc----hHHHHHHHHHHHHHHhccCCCcc--EEEEEEe--CCCeEEEEEEccC
Confidence            89999999999989999999998653211    22345678999999999999997  4444443  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      ++++......   ...+++.++..++.|++.||.|||++|++||||||+||++... +..+.+||+|||++...... ..
T Consensus       105 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~-~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          105 GGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-EKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECSTTGGGTBCCCSSC
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecC-CCcccEEEeccCcceeecCCCcc
Confidence            9986554433   2358888899999999999999999999999999999999433 23457999999999876543 33


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||++.+
T Consensus       181 ~~~~~~~~y~aPE~~~~  197 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRG  197 (287)
T ss_dssp             SCHHHHHTTCCHHHHTT
T ss_pred             ccccCcccccChHHhcC
Confidence            45678999999999865

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.7e-30  Score=216.74  Aligned_cols=162  Identities=19%  Similarity=0.110  Sum_probs=116.8

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+   +..||+|.++...     .....+.+.+|+.+++.++||||+  .+++++.. .....++|||
T Consensus       100 G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv--~~~~~~~~-~~~~~~lv~e  171 (373)
T 3c1x_A          100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVL--SLLGICLR-SEGSPLVVLP  171 (373)
T ss_dssp             CSSSEEEEEEEEETTTEEEEEEEEECCSCS-----CSHHHHHHHHHHTTSTTCCCTTBC--CCCEEECC-CSSCCEEEEE
T ss_pred             CCCeEEEEEEEECCCCcEEEEEEEEcCCCC-----CHHHHHHHHHHHHHHHhCCCCCcc--eEEEEEEc-CCCCeEEEEE
Confidence            99999999987533   3468999876421     122345678999999999999997  44444322 2235689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus       172 ~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          172 YMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             CCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC---------
T ss_pred             CCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE----CCCCCEEEeecccccccccc
Confidence            99999977776542  2347777888999999999999999999999999999999    88889999999999876432


Q ss_pred             ------cccceeecccCCCCccccC
Q psy11822        210 ------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ------~~~~~~gt~~y~aPE~l~~  228 (229)
                            ......+|+.|+|||++.+
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~  270 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQT  270 (373)
T ss_dssp             ------------CCGGGSCHHHHHH
T ss_pred             ccccccccCCCCCcccccChHHhcC
Confidence                  1234567788999998753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=4.1e-31  Score=216.81  Aligned_cols=163  Identities=17%  Similarity=0.138  Sum_probs=126.5

Q ss_pred             CCceeeeeeecCCCCc-----EEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLEGGE-----LLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|.+..++.     .||+|.++....     ....+.+.+|+.+++.+ +||||+  .+++++.  .....++
T Consensus        57 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~h~~iv--~~~~~~~--~~~~~~l  127 (333)
T 2i1m_A           57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-----ADEKEALMSELKIMSHLGQHENIV--NLLGACT--HGGPVLV  127 (333)
T ss_dssp             CSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEE
T ss_pred             CCCcceEEEEecCCCcccchhHHHHHhcccccC-----hHHHHHHHHHHHHHHhhcCCCCee--eEEEEEe--cCCceEE
Confidence            9999999999876654     799999875321     11234678999999999 899997  4454443  3446799


Q ss_pred             eeeeeeCCCCCccCCCCC-----------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccE
Q psy11822        127 MMEVTRRSQYTGATAPPP-----------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRV  195 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~-----------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~  195 (229)
                      ||||+++|+|..++....           ....+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+
T Consensus       128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~----~~~~~~  203 (333)
T 2i1m_A          128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVA  203 (333)
T ss_dssp             EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE----EGGGEE
T ss_pred             EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE----CCCCeE
Confidence            999999988766543210           02346777889999999999999999999999999999999    777899


Q ss_pred             EEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        196 KVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       196 kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ||+|||++......    ......||+.|+|||++.+
T Consensus       204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  240 (333)
T 2i1m_A          204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD  240 (333)
T ss_dssp             EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH
T ss_pred             EECccccccccccccceeecCCCCCCccccCHHHhcc
Confidence            99999999876433    2245677889999998753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.3e-30  Score=209.80  Aligned_cols=160  Identities=16%  Similarity=0.162  Sum_probs=126.8

Q ss_pred             CCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+.  .++..||+|+++....     ....+.+.+|+.+++.++||||+  .+++++.   ....++||||
T Consensus        21 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~---~~~~~lv~e~   90 (287)
T 1u59_A           21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-----KADTEEMMREAQIMHQLDNPYIV--RLIGVCQ---AEALMLVMEM   90 (287)
T ss_dssp             CTTEEEEEEEEC---CCEEEEEEEECSSCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEE---SSSEEEEEEC
T ss_pred             cCceeEEEeEeccCCCcceEEEEecCCccc-----hhHHHHHHHHHHHHHhCCCCCEe--EEEEEec---CCCcEEEEEe
Confidence            999999999854  4688999999876311     12344678999999999999997  4444442   2347999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++|..++...  ...+++.++..++.|++.||.|||+.||+||||||+||++    +.++.+||+|||++...... 
T Consensus        91 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili----~~~~~~kl~Dfg~~~~~~~~~  164 (287)
T 1u59_A           91 AGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGADD  164 (287)
T ss_dssp             CTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTCS
T ss_pred             CCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE----cCCCCEEECcccceeeeccCc
Confidence            9999977765432  2358888999999999999999999999999999999999    67779999999999887543 


Q ss_pred             ----cccceeecccCCCCccccC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~  228 (229)
                          ......||+.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~  187 (287)
T 1u59_A          165 SYYTARSAGKWPLKWYAPECINF  187 (287)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHH
T ss_pred             ceeeccccccccccccCHHHhcc
Confidence                1234466889999998753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=1.4e-30  Score=209.85  Aligned_cols=161  Identities=17%  Similarity=0.184  Sum_probs=124.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++....        ..+.+.+|+.+++.++|++++.  .+... .......++||||+ 
T Consensus        20 G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~e~~~l~~l~~~~~i~--~~~~~-~~~~~~~~lv~e~~-   87 (296)
T 4hgt_A           20 GSFGDIYLGTDIAAGEEVAIKLECVKT--------KHPQLHIESKIYKMMQGGVGIP--TIRWC-GAEGDYNVMVMELL-   87 (296)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEEEEC-----------CCCHHHHHHHHHHHTTSTTCC--CEEEE-EEETTEEEEEEECC-
T ss_pred             CCCeEEEEEEEcCCCceEEEEeecccc--------cchHHHHHHHHHHHhcCCCCCC--eeeee-cCCCCceEEEEEcc-
Confidence            999999999999999999999865531        2235688999999998887752  22222 12334568999999 


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      ++++..+....  ...+++.++..++.|++.||.|||++||+||||||+|||+... +..+.+||+|||+++......  
T Consensus        88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~-~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           88 GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG-GGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc-CCCCeEEEecCccceeccCcccC
Confidence            77766554421  2358888999999999999999999999999999999999432 355689999999998775431  


Q ss_pred             -------ccceeecccCCCCccccC
Q psy11822        211 -------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -------~~~~~gt~~y~aPE~l~~  228 (229)
                             .....||+.|+|||++.+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred             ccCCCCcccccCCCccccchHHhcC
Confidence                   235689999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=4e-30  Score=205.89  Aligned_cols=158  Identities=18%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..||+|.++..       ....+.+.+|+++++.++||||+.  +++++.   ....++||||++
T Consensus        24 G~~g~Vy~~~~~-~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~--~~~~~~---~~~~~~v~e~~~   90 (279)
T 1qpc_A           24 GQFGEVWMGYYN-GHTKVAVKSLKQG-------SMSPDAFLAEANLMKQLQHQRLVR--LYAVVT---QEPIYIITEYME   90 (279)
T ss_dssp             ETTEEEEEEEET-TTEEEEEEEECTT-------SSCHHHHHHHHHHHHHCCCTTBCC--EEEEEC---SSSCEEEEECCT
T ss_pred             CCCeEEEEEEEc-CCcEEEEEEecCC-------cccHHHHHHHHHHHHhCCCcCcce--EEEEEc---CCCcEEEEecCC
Confidence            999999999975 5778999998753       123346789999999999999974  444433   234789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +++|..++.... ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++.......  
T Consensus        91 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE----cCCCCEEECCCcccccccCcccc
Confidence            999877765411 1247888889999999999999999999999999999999    778899999999998875532  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~y~aPE~~~~  184 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINY  184 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHH
T ss_pred             cccCCCCccCccChhhhcc
Confidence             234567788999998753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=2.6e-30  Score=210.37  Aligned_cols=160  Identities=19%  Similarity=0.233  Sum_probs=120.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh------------ccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH------------CNN  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~------------~~~  120 (229)
                      |+||.||+|.+..+|+.||+|++....      ....+.+.+|+.+++.++||||+.  +++++.            ...
T Consensus        22 G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~--~~~~~~~~~~~~~~~~~~~~~   93 (320)
T 2i6l_A           22 GGNGLVFSAVDNDCDKRVAIKKIVLTD------PQSVKHALREIKIIRRLDHDNIVK--VFEILGPSGSQLTDDVGSLTE   93 (320)
T ss_dssp             ----CEEEEEETTTTEEEEEEEEECCS------HHHHHHHHHHHHHHHTCCCTTBCC--EEEEECTTSCBCCC----CCS
T ss_pred             CCCeEEEEEEECCCCeEEEEEEEecCC------hHHHHHHHHHHHHHHhcCCCCeeE--EEEeccccccccccccccccc
Confidence            899999999999999999999876432      122345688999999999999984  333321            123


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ....++||||+++ ++..++..    ..+++..+..++.|++.||+|||++||+||||||+||++.   ..++.+||+||
T Consensus        94 ~~~~~lv~e~~~~-~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~kl~Df  165 (320)
T 2i6l_A           94 LNSVYIVQEYMET-DLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN---TEDLVLKIGDF  165 (320)
T ss_dssp             CSEEEEEEECCSE-EHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTTEEEECCC
T ss_pred             cCceeEEeeccCC-CHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCeEEEccC
Confidence            3567999999985 65555443    3588888899999999999999999999999999999992   13569999999


Q ss_pred             CcceecCcc-----cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+++.....     ......+|+.|+|||++.+
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS  198 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcC
Confidence            999876432     2244577899999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=1.4e-30  Score=207.04  Aligned_cols=157  Identities=17%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+. ++..||+|+++...       ...+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        19 G~~g~V~~~~~~-~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   86 (267)
T 3t9t_A           19 GQFGLVHLGYWL-NKDKVAIKTIREGA-------MSEEDFIEEAEVMMKLSHPKLV--QLYGVCL--EQAPICLVTEFME   86 (267)
T ss_dssp             ETTEEEEEEEET-TTEEEEEEEECTTT-------BCHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSCEEEECCCT
T ss_pred             CCceeEEEEEec-CCCeEEEEEccccC-------CCHHHHHHHHHHHHhCCCCCEe--eEEEEEc--cCCCeEEEEeCCC
Confidence            999999999985 67899999987632       1234678899999999999997  4444443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++..+....  ...+++..+..++.|++.||.|||++|++||||||+||++    +.++.+||+|||++......   
T Consensus        87 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           87 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             TCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----CGGGCEEECCTTGGGGBCCHHHH
T ss_pred             CCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----CCCCCEEEccccccccccccccc
Confidence            99977665432  2347888889999999999999999999999999999999    77889999999999876543   


Q ss_pred             cccceeecccCCCCcccc
Q psy11822        210 VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~  227 (229)
                      ......+|+.|+|||++.
T Consensus       161 ~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             STTSTTCCGGGCCHHHHH
T ss_pred             ccccccccccccChhhhc
Confidence            223456778899999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.4e-30  Score=207.95  Aligned_cols=163  Identities=20%  Similarity=0.142  Sum_probs=127.2

Q ss_pred             cCCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||.||+|.+..++.   .||+|.+....     .....+.+.+|+.+++.++||||+  .+++++... ....++||
T Consensus        31 ~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~~-~~~~~~v~  102 (298)
T 3pls_A           31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-----EMQQVEAFLREGLLMRGLNHPNVL--ALIGIMLPP-EGLPHVLL  102 (298)
T ss_dssp             EETTEEEEEEEEECSSSCEEEEEEEEETTCC-----SHHHHHHHHHHHHHHHTCCCTTBC--CCCEEECCS-SSCCEEEE
T ss_pred             cCCCceEEEEEEecCCCceeeeeeeeccccc-----cHHHHHHHHHHHHHHHhCCCCCee--eEEEEEecC-CCCcEEEE
Confidence            39999999998655444   89999886521     122344678999999999999997  455554322 23348999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.++++..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++....
T Consensus       103 e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          103 PYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML----DESFTVKVADFGLARDILD  176 (298)
T ss_dssp             CCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECCTTSSCTTTT
T ss_pred             ecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE----cCCCcEEeCcCCCcccccC
Confidence            999999976665442  2357888889999999999999999999999999999999    7888999999999986643


Q ss_pred             c------cccceeecccCCCCccccC
Q psy11822        209 A------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      .      ......+|+.|+|||++.+
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~  202 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQT  202 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTT
T ss_pred             CcccccccCcCCCCCccccChhhhcc
Confidence            2      2234678889999999865

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=7.1e-31  Score=212.45  Aligned_cols=159  Identities=21%  Similarity=0.265  Sum_probs=123.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||+|++....      ....+.+.+|+.+++.++||||+  .+++++.  .....++||||++
T Consensus        30 G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~--~~~~~~lv~e~~~   99 (302)
T 2j7t_A           30 GAFGKVYKAKNKETGALAAAKVIETKS------EEELEDYIVEIEILATCDHPYIV--KLLGAYY--HDGKLWIMIEFCP   99 (302)
T ss_dssp             STTCCEEEEEETTTCCEEEEEEEC----------CCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CC-CEEEEEECCT
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEecCCC------HHHHHHHHHHHHHHhcCCCCCEe--eeeeeee--eCCeEEEEEEeCC
Confidence            999999999999999999999987532      22345678899999999999997  4444443  3346799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+....  ...+++..+..++.|++.||.|||++|++||||||+||++    +.++.+||+|||++......  .
T Consensus       100 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  173 (302)
T 2j7t_A          100 GGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM----TLEGDIRLADFGVSAKNLKTLQK  173 (302)
T ss_dssp             TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----CTTSCEEECCCHHHHHHHHHHHC
T ss_pred             CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE----CCCCCEEEEECCCCccccccccc
Confidence            99976654321  2348888899999999999999999999999999999999    77789999999998654322  2


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....||+.|+|||++.
T Consensus       174 ~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          174 RDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             -----CCGGGCCHHHHH
T ss_pred             cccccCChhhcCCeeec
Confidence            34568999999999873

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=1.2e-30  Score=213.79  Aligned_cols=163  Identities=17%  Similarity=0.089  Sum_probs=125.2

Q ss_pred             CCceeeeeeecCCCCcEE--EEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELL--AEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~v--aiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..++..+  |+|.++....     ....+.+.+|+.+++++ +||||+  .+++++.  +....++|||
T Consensus        36 G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~E~~~l~~l~~hp~iv--~~~~~~~--~~~~~~lv~e  106 (327)
T 1fvr_A           36 GNFGQVLKARIKKDGLRMDAAIKRMKEYAS-----KDDHRDFAGELEVLCKLGHHPNII--NLLGACE--HRGYLYLAIE  106 (327)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEEEECC-----------CHHHHHHHHHTTCCCCTTBC--CEEEEEE--ETTEEEEEEC
T ss_pred             CCCceEEEEEEccCCcccceeeeeeccccc-----hHHHHHHHHHHHHHHhccCCCchh--hhceeee--eCCceEEEEe
Confidence            899999999998888865  9998765311     22344678899999999 999997  4554443  3346799999


Q ss_pred             eeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEE
Q psy11822        130 VTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVK  196 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~k  196 (229)
                      |+++++|..++....             ....+++.+++.++.|++.||.|||++||+||||||+||++    +.++.+|
T Consensus       107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~~~~~k  182 (327)
T 1fvr_A          107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENYVAK  182 (327)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGGCEE
T ss_pred             cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE----cCCCeEE
Confidence            999999776655421             12358888899999999999999999999999999999999    7788999


Q ss_pred             EeecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        197 VIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       197 l~DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|||+++..... ......+++.|+|||++.+
T Consensus       183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  215 (327)
T 1fvr_A          183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  215 (327)
T ss_dssp             ECCTTCEESSCEECCC----CCTTTCCHHHHHH
T ss_pred             EcccCcCccccccccccCCCCCccccChhhhcc
Confidence            9999999855432 2234567889999998753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=3.2e-30  Score=220.21  Aligned_cols=158  Identities=16%  Similarity=0.138  Sum_probs=121.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.. +..||||+++...       ...+.+.+|+.+++.++||||+.  +++++..   ...++||||++
T Consensus       195 G~fg~Vy~~~~~~-~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~--~~~~~~~---~~~~iv~e~~~  261 (452)
T 1fmk_A          195 GCFGEVWMGTWNG-TTRVAIKTLKPGT-------MSPEAFLQEAQVMKKLRHEKLVQ--LYAVVSE---EPIYIVTEYMS  261 (452)
T ss_dssp             CSSCEEEEEEETT-TEEEEEEECCTTS-------SCHHHHHHHHHHHHHCCCTTBCC--EEEEECS---SSCEEEECCCT
T ss_pred             CCCeEEEEEEECC-CceEEEEEeccCC-------CCHHHHHHHHHHHHhCCCCCEee--EEEEEcC---CceEEEehhhc
Confidence            9999999999864 5679999987631       22346789999999999999984  4444332   45799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +|+|..++.... ...+++.++..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||+++......  
T Consensus       262 ~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill----~~~~~~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          262 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC--------
T ss_pred             CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE----CCCCCEEECCCccceecCCCcee
Confidence            999777765311 1247888889999999999999999999999999999999    778899999999998775432  


Q ss_pred             -ccceeecccCCCCccccC
Q psy11822        211 -CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+++.|+|||++.+
T Consensus       337 ~~~~~~~~~~y~aPE~~~~  355 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALY  355 (452)
T ss_dssp             ------CCGGGSCHHHHHH
T ss_pred             cccCCcccccccCHhHHhc
Confidence             234566788999998753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=1.8e-30  Score=209.18  Aligned_cols=157  Identities=18%  Similarity=0.143  Sum_probs=114.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++.   ..||+|+++.....    ....+.+.+|+.+++.++||||+  .++++.   .....++||||++
T Consensus        35 G~~g~Vy~~~~~---~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~---~~~~~~lv~e~~~  102 (289)
T 3og7_A           35 GSFGTVYKGKWH---GDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNIL--LFMGYS---TAPQLAIVTQWCE  102 (289)
T ss_dssp             CSSEEEEEEESS---SEEEEEEESCSSCC----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEE---CSSSCEEEEECCC
T ss_pred             CCCeEEEEEEEc---CceEEEEEeccCCC----HHHHHHHHHHHHHHHhCCCCcEE--EEEeec---cCCccEEEEEecC
Confidence            999999999875   35999987643211    12234678999999999999997  344433   2334789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      ++++...+...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......   
T Consensus       103 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          103 GSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             EEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTTEEEECCCC-----------
T ss_pred             CCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE----CCCCCEEEccceecccccccccc
Confidence            99976665432  2458888889999999999999999999999999999999    77789999999999866432   


Q ss_pred             -cccceeecccCCCCcccc
Q psy11822        210 -VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~  227 (229)
                       ......||+.|+|||++.
T Consensus       177 ~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             -------CCCTTCCHHHHC
T ss_pred             ccccccCCCccccCchhhc
Confidence             234568999999999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.8e-30  Score=213.48  Aligned_cols=161  Identities=14%  Similarity=0.087  Sum_probs=119.9

Q ss_pred             CCceeeeeeecCCCC----cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGG----ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..++    ..||+|.++....     ......+.+|+.+++.++||||+  .+++++.  .....++||
T Consensus        55 G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv~  125 (333)
T 1mqb_A           55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-----EKQRVDFLGEAGIMGQFSHHNII--RLEGVIS--KYKPMMIIT  125 (333)
T ss_dssp             CSSSEEEEEEEEC---CCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSEEEEE
T ss_pred             CCCeEEEEEEEecCCCCccccEEEEEcCCCCC-----HHHHHHHHHHHHHHHhCCCCCCC--cEEEEEe--cCCCcEEEE
Confidence            999999999876543    4699999875321     11233568999999999999997  4444443  345679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++++|..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||+++....
T Consensus       126 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          126 EYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             ECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC------
T ss_pred             eCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE----CCCCcEEECCCCcchhhcc
Confidence            999999977765431  2358888899999999999999999999999999999999    7788999999999987754


Q ss_pred             cc-----ccceeecccCCCCccccC
Q psy11822        209 AV-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      ..     .....+|+.|+|||++.+
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~  224 (333)
T 1mqb_A          200 DPEATYTTSGGKIPIRWTAPEAISY  224 (333)
T ss_dssp             -----------CCCGGGSCHHHHHS
T ss_pred             ccccccccCCCCccccccCchhccc
Confidence            31     123456788999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.5e-30  Score=229.75  Aligned_cols=161  Identities=16%  Similarity=0.154  Sum_probs=124.4

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+.  .++..||||+++...     .....+.+.+|+++|+.++||||+  .+++++..   ...++|||
T Consensus       346 ~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~E~~il~~l~hpniv--~l~~~~~~---~~~~lv~E  415 (613)
T 2ozo_A          346 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-----EKADTEEMMREAQIMHQLDNPYIV--RLIGVCQA---EALMLVME  415 (613)
T ss_dssp             ECSSSEEEEEEEECSSCEEEEEEEECCCCC-----SSTTHHHHHHHHHHHTTCCCTTBC--CEEEEEES---SSEEEEEE
T ss_pred             cCCCcEEEEEEEecCCCcEEEEEEEcCCCC-----ChHHHHHHHHHHHHHHhCCCCCEe--eEEEEecc---CCeEEEEE
Confidence            3999999999875  356789999987531     122345778999999999999998  44444432   34799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|..++...  ...+++.++..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+|+.....
T Consensus       416 ~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl----~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          416 MAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL----VNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             CCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCSTTTTCC--
T ss_pred             eCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE----cCCCcEEEeeccCcccccCC
Confidence            99999977765442  2458888999999999999999999999999999999999    77789999999999876432


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+|+.|+|||++.+
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~  513 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINF  513 (613)
T ss_dssp             ------------CCTTSCHHHHHH
T ss_pred             CceeeeccCCCCccceeCHhhhcC
Confidence            1     123455688999998853

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.1e-30  Score=214.25  Aligned_cols=160  Identities=18%  Similarity=0.150  Sum_probs=118.1

Q ss_pred             CCceeeeeeecCCCCcEE----EEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELL----AEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|.+..+++.+    |+|.+...     ......+.+.+|+.+++.++||||+  .+++++...   ..++|+
T Consensus        26 G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv--~~~~~~~~~---~~~~v~   95 (327)
T 3lzb_A           26 GAFGTVYKGLWIPEGEKVKIPVAIKELREA-----TSPKANKEILDEAYVMASVDNPHVC--RLLGICLTS---TVQLIT   95 (327)
T ss_dssp             CSSEEEEEEEECCTTCSCCEEEEEEEECCC-----SSCCCHHHHHHHHHHHTTCCBTTBC--CCCEEEESS---SEEEEE
T ss_pred             CCCeEEEEEEEcCCCceEEEEEEEEeeccc-----cCHHHHHHHHHHHHHHHhCCCCCee--EEEEEEecC---CceEEE
Confidence            999999999998888755    66655431     1122345678899999999999997  455554432   368999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      +|+.++++..++...  ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++....
T Consensus        96 ~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~----~~~~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           96 QLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             CCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCTTC------
T ss_pred             EecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE----cCCCCEEEccCcceeEccC
Confidence            999999966654431  2358888899999999999999999999999999999999    7777999999999987744


Q ss_pred             c----cccceeecccCCCCccccC
Q psy11822        209 A----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .    ......||+.|+|||++.+
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3lzb_A          170 EEKEYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             ----------CCCGGGSCHHHHHH
T ss_pred             ccccccccCCCccccccCHHHHcC
Confidence            3    2234566788999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=2.3e-30  Score=215.24  Aligned_cols=164  Identities=23%  Similarity=0.308  Sum_probs=124.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-----------Cccccceehhhhhhcc--
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-----------HAFVTLAHLVDYAHCN--  119 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~ni~~~~~~~~~~~~--  119 (229)
                      |+||.||+|++..+++.||+|++.....       ..+.+.+|+.+++.+.           ||||+  .+++++...  
T Consensus        30 G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~--~~~~~~~~~~~  100 (373)
T 1q8y_A           30 GHFSTVWLAKDMVNNTHVAMKIVRGDKV-------YTEAAEDEIKLLQRVNDADNTKEDSMGANHIL--KLLDHFNHKGP  100 (373)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSCHH-------HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC--CCCEEEEEEET
T ss_pred             cCCeEEEEEEecCCCcEEEEEEecCCcc-------chhhhhHHHHHHHHhhcccccchhccccchHH--HHHHHhhccCC
Confidence            9999999999999999999999875321       1224467777777765           78887  444444322  


Q ss_pred             cccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCC--CCCccEE
Q psy11822        120 NVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPV--RQPYRVK  196 (229)
Q Consensus       120 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~--~~~~~~k  196 (229)
                      +....++||||+ ++++..++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||+...+  +..+.+|
T Consensus       101 ~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~k  178 (373)
T 1q8y_A          101 NGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  178 (373)
T ss_dssp             TEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             CCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEE
Confidence            233678999999 666544433211 23488888999999999999999998 999999999999995432  3445899


Q ss_pred             EeecCcceecCcccccceeecccCCCCccccC
Q psy11822        197 VIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       197 l~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|||++...... .....||+.|+|||++.+
T Consensus       179 l~Dfg~a~~~~~~-~~~~~~t~~y~aPE~~~~  209 (373)
T 1q8y_A          179 IADLGNACWYDEH-YTNSIQTREYRSPEVLLG  209 (373)
T ss_dssp             ECCCTTCEETTBC-CCSCCSCGGGCCHHHHHT
T ss_pred             EcccccccccCCC-CCCCCCCccccCcHHHhC
Confidence            9999999877654 345689999999999865

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=5.3e-30  Score=223.01  Aligned_cols=153  Identities=13%  Similarity=0.090  Sum_probs=118.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHH--HHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFI--DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|..  .+..+|+|.......  .........+++.+|++++++++||||+.+..++.    .....|+|||
T Consensus       346 ~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~----~~~~~~lVmE  419 (540)
T 3en9_A          346 KGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV----DLDNKRIMMS  419 (540)
T ss_dssp             --CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE----ETTTTEEEEE
T ss_pred             eCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE----eCCccEEEEE
Confidence            399999999954  478899987432110  11122223456799999999999999985444433    2334699999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++++|..++..           +..++.|+++||.|||++||+||||||+|||+    +.  .+||+|||+|+.....
T Consensus       420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl----~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF----DK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEE----SS--SEEECCCTTCEECCCH
T ss_pred             CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEE----CC--eEEEEECccCEECCCc
Confidence            9999998777554           56899999999999999999999999999999    66  9999999999988653


Q ss_pred             c---------ccceeecccCCCCcccc
Q psy11822        210 V---------CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 ~---------~~~~~gt~~y~aPE~l~  227 (229)
                      .         ....+||+.|||||++.
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~  509 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWE  509 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHH
Confidence            1         24679999999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=3.2e-30  Score=212.02  Aligned_cols=155  Identities=18%  Similarity=0.148  Sum_probs=123.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccc--ccCccccceehhhhhhccc--ccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEA--LNHAFVTLAHLVDYAHCNN--VKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~ni~~~~~~~~~~~~~--~~~~~lv~  128 (229)
                      |+||.||+|++  +|+.||+|++....         ...+.+|++++..  ++||||+.  +++++....  ....++||
T Consensus        53 G~~g~Vy~~~~--~~~~vavK~~~~~~---------~~~~~~e~~~~~~~~l~h~ni~~--~~~~~~~~~~~~~~~~lv~  119 (342)
T 1b6c_B           53 GRFGEVWRGKW--RGEEVAVKIFSSRE---------ERSWFREAEIYQTVMLRHENILG--FIAADNKDNGTWTQLWLVS  119 (342)
T ss_dssp             ETTEEEEEEEE--TTEEEEEEEECGGG---------HHHHHHHHHHHHHSCCCCTTBCC--EEEEEECCCSSCCCEEEEE
T ss_pred             CCCcEEEEEEE--cCccEEEEEeCchh---------HHHHHHHHHHHHHhhcCCCcEEE--EEeeecccCCccceeEEEE
Confidence            89999999997  48999999986532         1234567777765  79999974  444443222  12679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH--------HCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK--------QLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH--------~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ||+++++|..++..    ..+++.++..++.|++.||.|||        +.+|+||||||+|||+    +.++.+||+||
T Consensus       120 e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Df  191 (342)
T 1b6c_B          120 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADL  191 (342)
T ss_dssp             CCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE----CTTSCEEECCC
T ss_pred             eecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE----CCCCCEEEEEC
Confidence            99999998777654    35888889999999999999999        8999999999999999    77889999999


Q ss_pred             CcceecCccc------ccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAV------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~------~~~~~gt~~y~aPE~l~~  228 (229)
                      |++.......      .....||+.|+|||++.+
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  225 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  225 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcc
Confidence            9998765431      245689999999999865

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=5.4e-30  Score=220.13  Aligned_cols=161  Identities=16%  Similarity=0.165  Sum_probs=124.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+++.||||++...        ....++.+|+++++.+.|++.+. .+..+.  ......++||||+ 
T Consensus        18 G~fG~Vy~a~~~~~~~~vAvK~~~~~--------~~~~~~~~E~~il~~L~~~~~i~-~i~~~~--~~~~~~~lvme~~-   85 (483)
T 3sv0_A           18 GSFGEIYLGTNIQTNEEVAIKLENVK--------TKHPQLLYESKIYRILQGGTGIP-NVRWFG--VEGDYNVLVMDLL-   85 (483)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEETT--------CSSCCHHHHHHHHHHTTTSTTCC-CEEEEE--EETTEEEEEEECC-
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeccc--------cccHHHHHHHHHHHHhcCCCCCC-eEEEEE--eeCCEEEEEEECC-
Confidence            99999999999999999999986642        22335688999999997755431 222222  2334568999999 


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +++|..++...  ...+++.+++.|+.||+.||.|||++||+||||||+|||+... +..+.+||+|||+++......  
T Consensus        86 g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           86 GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-RRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-GGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-CCCCeEEEEeCCcceeccCCccc
Confidence            77766554421  2358889999999999999999999999999999999999432 356799999999998875432  


Q ss_pred             -------ccceeecccCCCCccccC
Q psy11822        211 -------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 -------~~~~~gt~~y~aPE~l~~  228 (229)
                             .....||+.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             cccccccccccCCCccccCHHHhcC
Confidence                   126789999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=3.1e-30  Score=211.40  Aligned_cols=161  Identities=21%  Similarity=0.179  Sum_probs=111.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhh------cccccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAH------CNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~------~~~~~~~~  125 (229)
                      |+||.||+|++..+++.||+|++.....      .....+.+|+.+++.+. ||||+.  +++++.      ......++
T Consensus        39 G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~~h~~iv~--~~~~~~~~~~~~~~~~~~~~  110 (337)
T 3ll6_A           39 GGFAFVYEAQDVGSGREYALKRLLSNEE------EKNRAIIQEVCFMKKLSGHPNIVQ--FCSAASIGKEESDTGQAEFL  110 (337)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEESSH------HHHHHHHHHHHHHHHHTTSTTBCC--EEEEEEECTTTSTTSSEEEE
T ss_pred             CCceEEEEEEECCCCcEEEEEEecCCch------HHHHHHHHHHHHHHHhccCCChhh--ccccccccccccccCCceEE
Confidence            9999999999999999999998754321      12235688999999995 999984  333331      12334578


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      +||||+++++.+.+ ........+++.+++.++.|++.||.|||+.|  |+||||||+|||+    +.++.+||+|||++
T Consensus       111 lv~e~~~g~L~~~l-~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~----~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          111 LLTELCKGQLVEFL-KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL----SNQGTIKLCDFGSA  185 (337)
T ss_dssp             EEEECCSEEHHHHH-HHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE----CTTSCEEBCCCTTC
T ss_pred             EEEEecCCCHHHHH-HHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE----CCCCCEEEecCccc
Confidence            99999985443322 21111245888899999999999999999999  9999999999999    77889999999999


Q ss_pred             eecCccc--------------ccceeecccCCCCccc
Q psy11822        204 SHVSKAV--------------CNTYLQSRYYRAPEII  226 (229)
Q Consensus       204 ~~~~~~~--------------~~~~~gt~~y~aPE~l  226 (229)
                      +......              .....||+.|+|||++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             BCCSSCC------------------------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            8775421              1145699999999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=4.9e-30  Score=210.24  Aligned_cols=164  Identities=24%  Similarity=0.257  Sum_probs=122.3

Q ss_pred             CCceeeeeeec-CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcccc----ceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTD-LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT----LAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~----~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+ ..+++.||+|+++...       ...+.+.+|+.+++.++|++..    .+.+++++.  .....++|
T Consensus        25 G~~g~V~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~--~~~~~~lv   95 (339)
T 1z57_A           25 GAFGKVVECIDHKAGGRHVAVKIVKNVD-------RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE--HHGHICIV   95 (339)
T ss_dssp             ETTEEEEEEEETTTTTEEEEEEEECSSH-------HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE--ETTEEEEE
T ss_pred             CCCeEEEEEEecCCCCcEEEEEEEecCC-------chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc--cCCcEEEE
Confidence            89999999998 5579999999987531       1233557899999999887632    124444433  33467999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC---------------CC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR---------------QP  192 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~---------------~~  192 (229)
                      |||+ ++++..++.... ...+++.++..++.|++.||+|||++||+||||||+|||+...+.               .+
T Consensus        96 ~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~  173 (339)
T 1z57_A           96 FELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN  173 (339)
T ss_dssp             EECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESC
T ss_pred             EcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccC
Confidence            9999 555444433211 124778888999999999999999999999999999999943210               05


Q ss_pred             ccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        193 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +.+||+|||+++..... .....||+.|+|||++.+
T Consensus       174 ~~~kl~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~  208 (339)
T 1z57_A          174 PDIKVVDFGSATYDDEH-HSTLVSTRHYRAPEVILA  208 (339)
T ss_dssp             CCEEECCCSSCEETTSC-CCSSCSCGGGCCHHHHTT
T ss_pred             CCceEeeCcccccCccc-cccccCCccccChHHhhC
Confidence            68999999999876543 356789999999999865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=2.6e-30  Score=207.28  Aligned_cols=160  Identities=17%  Similarity=0.159  Sum_probs=122.9

Q ss_pred             CCceeeeeeecCC---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLE---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..   ++..||+|.++....     ....+.+.+|+.+++.++||||+  .+++++.   ....++|||
T Consensus        23 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~--~~~~~~~---~~~~~~v~e   92 (281)
T 3cc6_A           23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-----LDNKEKFMSEAVIMKNLDHPHIV--KLIGIIE---EEPTWIIME   92 (281)
T ss_dssp             CSSSEEEEEEEECTTCCEEEEEEEECCTTSC-----HHHHHHHHHHHHHHHHHCCTTBC--CEEEEEC---SSSCEEEEE
T ss_pred             cCCeeEEEeEEcCCCCCcceEEEEecccccC-----chHHHHHHHHHHHHHhCCCCCcc--eEEEEEc---CCCCEEEEe
Confidence            9999999998543   455799999876321     12234678999999999999997  4444443   234689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++..++...  ...+++..+..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......
T Consensus        93 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           93 LYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILV----ASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             CCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----EETTEEEECCCCGGGCC---
T ss_pred             cCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE----CCCCcEEeCccCCCcccccc
Confidence            99999977665431  1347888889999999999999999999999999999999    66779999999999876543


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......+|+.|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~  188 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINF  188 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHH
T ss_pred             cccccccCCCCcceeCchhhcc
Confidence               2234567889999998753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.95  E-value=6.4e-30  Score=210.91  Aligned_cols=164  Identities=24%  Similarity=0.243  Sum_probs=124.1

Q ss_pred             CCceeeeeeecCCCC-cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCcccc----ceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDLEGG-ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT----LAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~----~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|.+..++ +.||+|+++...       ...+.+.+|+.+++.++|++..    .+.+.+++.  .....++|
T Consensus        30 G~~g~V~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~~lv  100 (355)
T 2eu9_A           30 GTFGKVVECLDHARGKSQVALKIIRNVG-------KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN--FHGHMCIA  100 (355)
T ss_dssp             ETTEEEEEEEETTTTTEEEEEEEECSCH-------HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE--ETTEEEEE
T ss_pred             cCCeEEEEEEecCCCceEEEEEEEcccc-------cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee--eCCeEEEE
Confidence            899999999998776 799999987531       1223557889999999877632    112333332  33467999


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC---------------CCC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV---------------RQP  192 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~---------------~~~  192 (229)
                      |||+.++++..+....  ...+++.++..++.|++.||.|||++||+||||||+|||+...+               +..
T Consensus       101 ~e~~~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  178 (355)
T 2eu9_A          101 FELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN  178 (355)
T ss_dssp             EECCCCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESC
T ss_pred             EeccCCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCC
Confidence            9999666655554331  13588888999999999999999999999999999999994432               345


Q ss_pred             ccEEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        193 YRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       193 ~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +.+||+|||+++..... .....||+.|+|||++.+
T Consensus       179 ~~~kl~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~  213 (355)
T 2eu9_A          179 TSIRVADFGSATFDHEH-HTTIVATRHYRPPEVILE  213 (355)
T ss_dssp             CCEEECCCTTCEETTSC-CCSSCSCGGGCCHHHHTT
T ss_pred             CcEEEeecCcccccccc-ccCCcCCCcccCCeeeec
Confidence            79999999999875543 355789999999999865

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=3e-30  Score=206.59  Aligned_cols=157  Identities=19%  Similarity=0.178  Sum_probs=116.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++.  |+.||+|+++..        ...+.+.+|+.+++.++||||+  .++++... .....++||||++
T Consensus        32 G~~g~V~~~~~~--~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~~-~~~~~~lv~e~~~   98 (278)
T 1byg_A           32 GEFGDVMLGDYR--GNKVAVKCIKND--------ATAQAFLAEASVMTQLRHSNLV--QLLGVIVE-EKGGLYIVTEYMA   98 (278)
T ss_dssp             CSSCEEEEEEET--TEEEEEEECCCC--------C--HHHHHTHHHHTTCCCTTBC--CEEEEECC-C--CCEEEECCCT
T ss_pred             CCCceEEEEEEc--CCEEEEEEecch--------hHHHHHHHHHHHHHhCCCCCEe--eEEEEEEc-CCCceEEEEecCC
Confidence            999999999875  899999998753        1334678899999999999997  44443322 2235799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +++|..++.... ...+++..+..++.|++.||.|||++|++||||||+||++    +.++.+||+|||++....... .
T Consensus        99 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----~~~~~~~l~Dfg~~~~~~~~~-~  172 (278)
T 1byg_A           99 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-D  172 (278)
T ss_dssp             TEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC----------
T ss_pred             CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE----eCCCcEEEeeccccccccccc-c
Confidence            998776654311 1126777889999999999999999999999999999999    778899999999998665432 3


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ...+++.|+|||++.+
T Consensus       173 ~~~~~~~y~aPE~~~~  188 (278)
T 1byg_A          173 TGKLPVKWTAPEALRE  188 (278)
T ss_dssp             ---CCTTTSCHHHHHH
T ss_pred             CCCccccccCHHHhCC
Confidence            4577889999998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=1.7e-30  Score=212.84  Aligned_cols=166  Identities=15%  Similarity=0.096  Sum_probs=121.4

Q ss_pred             CCceeeeeee-----cCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPT-----DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|+     +..+++.||+|.+.....     ......+.+|+.+++.++||||+  .+++++.  .....++|
T Consensus        41 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv--~~~~~~~--~~~~~~lv  111 (327)
T 2yfx_A           41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEALIISKFNHQNIV--RCIGVSL--QSLPRFIL  111 (327)
T ss_dssp             -CSSCEEEEEC--------CCEEEEEECCSSCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             CCCeeEEEEEEcCCCCCCccceEEEEEeccccc-----hhhHHHHHHHHHHHhhCCCCCCC--eEEEEEc--CCCCcEEE
Confidence            8999999999     456788999999864211     11223568899999999999997  4444443  33457999


Q ss_pred             eeeeeCCCCCccCCCCC----CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcc
Q psy11822        128 MEVTRRSQYTGATAPPP----PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSA  203 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~----~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a  203 (229)
                      |||+++++|..++....    ....+++.+++.++.|++.||.|||++||+||||||+|||+... .....+||+|||++
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~-~~~~~~kl~Dfg~~  190 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP-GPGRVAKIGDFGMA  190 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS-STTCCEEECCCHHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecC-CCcceEEECccccc
Confidence            99999998766654321    12347777788999999999999999999999999999999432 24457999999999


Q ss_pred             eecCcc----cccceeecccCCCCccccC
Q psy11822        204 SHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       204 ~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......    ......||+.|+|||++.+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  219 (327)
T 2yfx_A          191 RDIYRASYYRKGGCAMLPVKWMPPEAFME  219 (327)
T ss_dssp             HHHHC------CCGGGSCGGGCCHHHHHH
T ss_pred             cccccccccccCCCcCCCcceeCHhHhcC
Confidence            765332    2234577889999998753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=3.7e-30  Score=224.05  Aligned_cols=157  Identities=17%  Similarity=0.147  Sum_probs=125.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.. +..||||+++...       ...+.+.+|+.+|+.++||||+.  +++++..   ...++||||++
T Consensus       278 G~fg~Vy~~~~~~-~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~hpniv~--~~~~~~~---~~~~lv~e~~~  344 (535)
T 2h8h_A          278 GCFGEVWMGTWNG-TTRVAIKTLKPGT-------MSPEAFLQEAQVMKKLRHEKLVQ--LYAVVSE---EPIYIVTEYMS  344 (535)
T ss_dssp             CSSEEEEEEEETT-TEEEEEEEECTTS-------SCHHHHHHHHHHHHHCCCTTBCC--EEEEECS---SSCEEEECCCT
T ss_pred             CCCeEEEEEEECC-CceEEEEEeCCCC-------CCHHHHHHHHHHHHhCCCCCEee--EEEEEee---ccceEeeehhc
Confidence            9999999999864 5679999987631       22346789999999999999984  4444332   45799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccc--
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~--  210 (229)
                      +|+|..++.... ...+++.+++.++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++......  
T Consensus       345 ~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          345 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             TEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCTTSTTTCCCHHHH
T ss_pred             CCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE----cCCCcEEEcccccceecCCCcee
Confidence            999777665311 1247788889999999999999999999999999999999    778899999999998775432  


Q ss_pred             -ccceeecccCCCCcccc
Q psy11822        211 -CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 -~~~~~gt~~y~aPE~l~  227 (229)
                       .....++..|+|||++.
T Consensus       420 ~~~~~~~~~~y~aPE~~~  437 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAAL  437 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHH
T ss_pred             cccCCcCcccccCHHHhc
Confidence             23345678899999875

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=8.4e-30  Score=208.22  Aligned_cols=164  Identities=25%  Similarity=0.304  Sum_probs=124.1

Q ss_pred             CCceeeeeeecC-CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhh---cccccccc
Q psy11822         53 DDIGQVNVPTDL-EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAH---CNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~---~~~~~~~~  125 (229)
                      |+||.||+|++. .+|+.||+|+++.....    ......+.+|+.+++.+   .||||+.  +++++.   .......+
T Consensus        22 G~~g~V~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~h~~i~~--~~~~~~~~~~~~~~~~~   95 (326)
T 1blx_A           22 GAYGKVFKARDLKNGGRFVALKRVRVQTGE----EGMPLSTIREVAVLRHLETFEHPNVVR--LFDVCTVSRTDRETKLT   95 (326)
T ss_dssp             ETTEEEEEEEETTTTTEEEEEEEEEEEBCT----TSCBCTHHHHHHHHHHHHHTCCTTBCC--EEEEEEEEECSSEEEEE
T ss_pred             cccEEEEEEEecCCCCEEEEEEEeccCccc----ccCCchhhHHHHHHHhhhccCCCCeEe--eeeeeeecccCCCceEE
Confidence            899999999985 67899999988653111    11122446777777666   8999974  444432   12345679


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      +||||+++ ++..++.... ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++..
T Consensus        96 lv~e~~~~-~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili----~~~~~~kl~Dfg~~~~  169 (326)
T 1blx_A           96 LVFEHVDQ-DLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARI  169 (326)
T ss_dssp             EEEECCSC-BHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCC
T ss_pred             EEEecCCC-CHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE----cCCCCEEEecCccccc
Confidence            99999995 5444433211 1248888899999999999999999999999999999999    7788999999999987


Q ss_pred             cCcc-cccceeecccCCCCccccC
Q psy11822        206 VSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .... ......||+.|+|||++.+
T Consensus       170 ~~~~~~~~~~~~~~~y~aPE~~~~  193 (326)
T 1blx_A          170 YSFQMALTSVVVTLWYRAPEVLLQ  193 (326)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTT
T ss_pred             ccCCCCccccccccceeCHHHHhc
Confidence            7543 3456789999999999865

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.4e-29  Score=212.68  Aligned_cols=159  Identities=17%  Similarity=0.181  Sum_probs=115.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||+||.. ...+|+.||||++...         ....+.+|+.+++.+ +||||+.  +++.+.  +....|+||||+
T Consensus        35 G~~G~V~~~-~~~~~~~vAvK~~~~~---------~~~~~~~E~~~l~~l~~HpnIv~--l~~~~~--~~~~~~lv~E~~  100 (432)
T 3p23_A           35 GAEGTIVYR-GMFDNRDVAVKRILPE---------CFSFADREVQLLRESDEHPNVIR--YFCTEK--DRQFQYIAIELC  100 (432)
T ss_dssp             CGGGCEEEE-EESSSSEEEEEEECTT---------TEEECHHHHHHHHHSCCCTTBCC--EEEEEE--ETTEEEEEEECC
T ss_pred             CcCEEEEEE-EEeCCeEEEEEEECHH---------HHHHHHHHHHHHHhccCCCCcCe--EEEEEe--cCCEEEEEEECC
Confidence            999996533 2356899999988642         123457899999998 8999984  444433  345579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++ ++..++...  ...+++.++..++.||+.||.|||++||+||||||+|||+..++ +....+||+|||+|+..... 
T Consensus       101 ~g-~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~  177 (432)
T 3p23_A          101 AA-TLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR  177 (432)
T ss_dssp             SE-EHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred             CC-CHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence            86 443333321  22356667789999999999999999999999999999995432 23347889999999877543 


Q ss_pred             ----cccceeecccCCCCccccC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~  228 (229)
                          .....+||+.|+|||++.+
T Consensus       178 ~~~~~~~~~~gt~~y~APE~l~~  200 (432)
T 3p23_A          178 HSFSRRSGVPGTEGWIAPEMLSE  200 (432)
T ss_dssp             --------CCSCTTSCCGGGTSC
T ss_pred             cceeeccccCCCcCccChhhhhc
Confidence                2345789999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=8e-30  Score=205.11  Aligned_cols=162  Identities=18%  Similarity=0.167  Sum_probs=116.9

Q ss_pred             CCceeeeeeecCC-CCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLE-GGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++.. ++.  .||+|+++.....   .....+.+.+|+.+++.++||||+  .+++++...   ..++|||
T Consensus        29 G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~~~---~~~~v~e  100 (291)
T 1u46_A           29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS---QPEAMDDFIREVNAMHSLDHRNLI--RLYGVVLTP---PMKMVTE  100 (291)
T ss_dssp             ---CCCEEEEEECTTSCEEEEEEEC-----------CHHHHHHHHHHHHHHHCCCTTBC--CEEEEECSS---SCEEEEE
T ss_pred             CCceeEEEEEeccCCCceeEEEEEEEccCccC---CHHHHHHHHHHHHHHHhCCCCCcc--cEEEEEccC---CceeeEe
Confidence            8999999998643 333  6999998764322   123445678999999999999997  444444332   3689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |++++++...+...  ...+++.++..++.|++.||.|||++||+||||||+||++    +.++.+||+|||++......
T Consensus       101 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili----~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A          101 LAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             CCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-
T ss_pred             cccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE----cCCCCEEEcccccccccccc
Confidence            99999976654431  2358888899999999999999999999999999999999    67779999999999887543


Q ss_pred             c-----ccceeecccCCCCccccC
Q psy11822        210 V-----CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~-----~~~~~gt~~y~aPE~l~~  228 (229)
                      .     .....+|+.|+|||++.+
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~  198 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKT  198 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHH
T ss_pred             ccchhhhccCCCCceeeCchhhcC
Confidence            1     234567888999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.95  E-value=2.2e-29  Score=210.61  Aligned_cols=162  Identities=28%  Similarity=0.363  Sum_probs=120.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccce---ehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLA---HLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~---~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||.||+|++..+++.||||+++...       .....+.+|+.+++.++ |+++...   .+.+++.  .....++||
T Consensus        65 G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~--~~~~~~lv~  135 (382)
T 2vx3_A           65 GSFGQVVKAYDRVEQEWVAIKIIKNKK-------AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM--FRNHLCLVF  135 (382)
T ss_dssp             ETTEEEEEEEETTTTEEEEEEEECSSH-------HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE--ETTEEEEEE
T ss_pred             cCCEEEEEEEEcCCCcEEEEEEEeccH-------HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec--cCCceEEEE
Confidence            899999999999999999999987532       11234567788887774 6654322   3333332  334679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHH--HCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK--QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH--~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||+++ ++..++.... ...+++..+..++.|++.||.|||  +.||+||||||+|||+..  +..+.+||+|||+|+..
T Consensus       136 e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~--~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          136 EMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN--PKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             ECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS--TTSCCEEECCCTTCEET
T ss_pred             ecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec--CCCCcEEEEeccCceec
Confidence            99986 4333333211 234888889999999999999999  579999999999999943  23568999999999887


Q ss_pred             CcccccceeecccCCCCccccC
Q psy11822        207 SKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ... .....||+.|+|||++.+
T Consensus       212 ~~~-~~~~~~t~~y~aPE~~~~  232 (382)
T 2vx3_A          212 GQR-IYQYIQSRFYRSPEVLLG  232 (382)
T ss_dssp             TCC-CCSSCSCGGGCCHHHHTT
T ss_pred             ccc-cccccCCccccChHHHcC
Confidence            553 356789999999999876

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=4.2e-29  Score=203.52  Aligned_cols=158  Identities=17%  Similarity=0.122  Sum_probs=122.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+.   ..+|+|+++...    ......+.+.+|+.+++.++||||+  .+++++.  +....++||||++
T Consensus        44 G~~g~V~~~~~~---~~~avk~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv--~~~~~~~--~~~~~~iv~e~~~  112 (319)
T 2y4i_B           44 GRFGQVYHGRWH---GEVAIRLIDIER----DNEDQLKAFKREVMAYRQTRHENVV--LFMGACM--SPPHLAIITSLCK  112 (319)
T ss_dssp             SSSSEEEEEEES---SSEEEEECCCCS----CCCCCCCCCCTTGGGGTTCCCTTBC--CCCEEEE--CSSCEEEECBCCC
T ss_pred             CCceEEEEEEEc---CeEEEEEeecCC----CCHHHHHHHHHHHHHHhcCCCCCEe--EEEEEEe--cCCceEEEeeccc
Confidence            899999999985   359999887531    1122345678999999999999997  4555443  3345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc----
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----  208 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~----  208 (229)
                      ++++..++...  ...+++.++..++.|++.||.|||++||+||||||+||++    + ++.+||+|||++.....    
T Consensus       113 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~----~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          113 GRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----D-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             SEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE----C---CCEECCCSCCC--------
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE----e-CCCEEEeecCCcccccccccc
Confidence            99977776652  2358888899999999999999999999999999999999    5 46999999999876532    


Q ss_pred             ---ccccceeecccCCCCccccC
Q psy11822        209 ---AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ---~~~~~~~gt~~y~aPE~l~~  228 (229)
                         .......||+.|+|||++.+
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSC
T ss_pred             ccccccccCCCcccccChHHhhh
Confidence               12234579999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=6.9e-29  Score=210.97  Aligned_cols=161  Identities=20%  Similarity=0.211  Sum_probs=113.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||+||.+. ..+|+.||||++....         .+.+.+|+.+++.+ +||||+.  +++.+.  +....++||||+
T Consensus        26 G~~g~V~~~~-~~~g~~vAvK~~~~~~---------~~~~~~E~~~l~~l~~HpnIv~--~~~~~~--~~~~~~lv~E~~   91 (434)
T 2rio_A           26 GSSGTVVFQG-SFQGRPVAVKRMLIDF---------CDIALMEIKLLTESDDHPNVIR--YYCSET--TDRFLYIALELC   91 (434)
T ss_dssp             CSTTCEEEEE-ESSSSEEEEEEEEGGG---------HHHHHHHHHHHHHHTTSTTBCC--EEEEEE--CSSEEEEEECCC
T ss_pred             CCCeEEEEEE-EECCeEEEEEEEcHHH---------HHHHHHHHHHHHhccCCCCcCe--EEEEEe--cCCeEEEEEecC
Confidence            9999998654 4579999999886532         12447889899876 8999984  344433  445679999999


Q ss_pred             eCCCCCccCCCCCCC----CccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC---------CCCccEEEe
Q psy11822        132 RRSQYTGATAPPPPA----QVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV---------RQPYRVKVI  198 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~----~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~---------~~~~~~kl~  198 (229)
                      ++ +|..++......    ...++..++.++.||+.||.|||++||+||||||+|||+....         +..+.+||+
T Consensus        92 ~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           92 NL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             SE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             CC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            75 655444332111    1124456678999999999999999999999999999995431         244589999


Q ss_pred             ecCcceecCccc------ccceeecccCCCCccccC
Q psy11822        199 DFGSASHVSKAV------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       199 DFg~a~~~~~~~------~~~~~gt~~y~aPE~l~~  228 (229)
                      |||+|+......      ....+||+.|+|||++.+
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence            999999875531      235689999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=3.4e-29  Score=222.58  Aligned_cols=160  Identities=17%  Similarity=0.115  Sum_probs=122.9

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+   +..||+|.++....     ....+.+.+|+.+++.++||||+.  +++++.   ....++|||
T Consensus       401 G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~--l~~~~~---~~~~~lv~E  470 (656)
T 2j0j_A          401 GQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-----DSVREKFLQEALTMRQFDHPHIVK--LIGVIT---ENPVWIIME  470 (656)
T ss_dssp             CSSCCEEEEEECCSSSCCEEEEEEECSSTTC-----HHHHHHHHHHHHHHHHCCCTTBCC--EEEEEC---SSSCEEEEE
T ss_pred             CCCEEEEEEEEecCCCccEEEEEEEecccCC-----HHHHHHHHHHHHHHHhCCCCCCCe--EEEEEe---cCceEEEEE
Confidence            99999999988643   56799998765311     122346789999999999999984  444442   234789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|..++...  ...+++..+..++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+++.....
T Consensus       471 ~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl----~~~~~vkL~DFG~a~~~~~~  544 (656)
T 2j0j_A          471 LCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDS  544 (656)
T ss_dssp             CCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECCCCCCCSCCC-
T ss_pred             cCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE----eCCCCEEEEecCCCeecCCC
Confidence            99999977765431  2247778888999999999999999999999999999999    77789999999999877543


Q ss_pred             c---ccceeecccCCCCccccC
Q psy11822        210 V---CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~---~~~~~gt~~y~aPE~l~~  228 (229)
                      .   .....+|+.|+|||++.+
T Consensus       545 ~~~~~~~~~~t~~y~aPE~~~~  566 (656)
T 2j0j_A          545 TYYKASKGKLPIKWMAPESINF  566 (656)
T ss_dssp             ---------CCGGGCCHHHHHH
T ss_pred             cceeccCCCCCcceeCHHHhcC
Confidence            2   234567789999998753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=3.9e-29  Score=204.65  Aligned_cols=162  Identities=23%  Similarity=0.246  Sum_probs=105.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccc-ccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRIT-PGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|.+..+|+.||+|+++......     ....+.+|+. +++.++||||+  .+++++.  .....++||||+
T Consensus        33 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~e~~~~~~~~~h~niv--~~~~~~~--~~~~~~lv~e~~  103 (327)
T 3aln_A           33 GAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-----EQKQLLMDLDVVMRSSDCPYIV--QFYGALF--REGDCWICMELM  103 (327)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEECCCCHH-----HHHHHHHHHHHHHSSCCCTTBC--CEEEEEE--CSSEEEEEECCC
T ss_pred             CCCEEEEEEEEcCCCCEEEEEEeecccCch-----HHHHHHHHHHHHHHcCCCCcEe--eeeeEEE--eCCceEEEEeec
Confidence            999999999999999999999986532111     1112344444 66778999997  4444443  334579999999


Q ss_pred             eCCCCCccCCC-CCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        132 RRSQYTGATAP-PPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       132 ~~~~l~~~~~~-~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      +++....+... ......+++..+..++.|++.||.|||+. ||+||||||+||++    +.++.+||+|||+++.....
T Consensus       104 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          104 STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL----DRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             SEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE----ETTTEEEECCCSSSCC----
T ss_pred             CCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE----cCCCCEEEccCCCceecccc
Confidence            97542222100 00023578888899999999999999998 99999999999999    77789999999999877544


Q ss_pred             -cccceeecccCCCCcccc
Q psy11822        210 -VCNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~  227 (229)
                       ......||+.|+|||++.
T Consensus       180 ~~~~~~~gt~~y~aPE~~~  198 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERID  198 (327)
T ss_dssp             -------------------
T ss_pred             cccccCCCCccccCceeec
Confidence             233458999999999983

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=5.3e-29  Score=202.68  Aligned_cols=158  Identities=23%  Similarity=0.254  Sum_probs=116.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC--ccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH--AFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|.+. +++.||+|++......    ....+.+.+|+.+++.+.|  |||+  .+++++.  +....++||| 
T Consensus        39 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~iv--~~~~~~~--~~~~~~lv~e-  108 (313)
T 3cek_A           39 GGSSKVFQVLNE-KKQIYAIKYVNLEEAD----NQTLDSYRNEIAYLNKLQQHSDKII--RLYDYEI--TDQYIYMVME-  108 (313)
T ss_dssp             CSSEEEEEEECT-TCCEEEEEEEECSSCC----HHHHHHHHHHHHHHHHHGGGCTTBC--CEEEEEE--CSSEEEEEEC-
T ss_pred             CCCEEEEEEEcC-CCcEEEEEEecccccc----ccchHHHHHHHHHHHhccccCCceE--EEEEEee--cCCEEEEEEe-
Confidence            999999999985 5899999998642111    1233467889999999974  8887  4444443  3445799999 


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.+++|..++..   ...+++.++..++.|+++||.|||++||+||||||+|||+    +. +.+||+|||++...... 
T Consensus       109 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~----~~-~~~kL~Dfg~~~~~~~~~  180 (313)
T 3cek_A          109 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI----VD-GMLKLIDFGIANQMQPDT  180 (313)
T ss_dssp             CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----ET-TEEEECCCSSSCC-----
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE----EC-CeEEEeeccccccccCcc
Confidence            456665555443   2357888889999999999999999999999999999999    43 68999999999876543 


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......||+.|+|||++.+
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          181 TSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             ---------CCGGGCCHHHHTT
T ss_pred             ccccccCCCCCCCcCCHHHHhh
Confidence               2235679999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=9e-29  Score=201.35  Aligned_cols=160  Identities=21%  Similarity=0.194  Sum_probs=109.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|.+..+|+.||+|++.......    ...+.+..+..+++.++||||+  .+++++.  .....++||||+ 
T Consensus        36 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~~~~~~~~h~~i~--~~~~~~~--~~~~~~lv~e~~-  106 (318)
T 2dyl_A           36 GTCGQVWKMRFRKTGHVIAVKQMRRSGNKE----ENKRILMDLDVVLKSHDCPYIV--QCFGTFI--TNTDVFIAMELM-  106 (318)
T ss_dssp             ----CEEEEEETTTCCEEEEEEEETTSCHH----HHHHHHHHHHHHHHTTTCTTBC--CEEEEEE--CSSEEEEEECCC-
T ss_pred             cCCeeEEEEEEecCCeEEEEEEecccccch----HHHHHHHHHHHHHHhcCCCcee--eEEEEEe--cCCcEEEEEecc-
Confidence            899999999999999999999987532211    1112234444567788999997  4444443  334679999999 


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC-CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL-GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~-~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~  210 (229)
                      ++.+..+....  ...+++..+..++.|++.||.|||++ ||+||||||+||++    +.++.+||+|||++...... .
T Consensus       107 ~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~----~~~~~~kl~dfg~~~~~~~~~~  180 (318)
T 2dyl_A          107 GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL----DERGQIKLCDFGISGRLVDDKA  180 (318)
T ss_dssp             SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE----CTTSCEEECCCTTC--------
T ss_pred             CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE----CCCCCEEEEECCCchhccCCcc
Confidence            34433332210  23578888899999999999999995 99999999999999    78889999999999876543 3


Q ss_pred             ccceeecccCCCCcccc
Q psy11822        211 CNTYLQSRYYRAPEIIL  227 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~  227 (229)
                      .....||+.|+|||++.
T Consensus       181 ~~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          181 KDRSAGCAAYMAPERID  197 (318)
T ss_dssp             ------CCTTCCHHHHC
T ss_pred             ccccCCCccccChhhcc
Confidence            34568999999999984

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=1.4e-28  Score=207.80  Aligned_cols=165  Identities=19%  Similarity=0.159  Sum_probs=114.2

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-cccccee-------------------
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAH-------------------  111 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~-------------------  111 (229)
                      .|+||.||+|++..+|+.||||+++.....   .....+.+.+|+.+++.+.| .|.....                   
T Consensus        88 ~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~---~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (413)
T 3dzo_A           88 QEDPYAYLEATDQETGESFEVHVPYFTERP---PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK  164 (413)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEECCSCC-------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---
T ss_pred             cCCCEEEEEEEecCCCCceEEEEEecCCCc---cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCc
Confidence            399999999999999999999998732111   12234567888888888876 2221000                   


Q ss_pred             hhhhhhccc---ccccceeeeeeeCCCCCccCC----CCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCee
Q psy11822        112 LVDYAHCNN---VKASVQMMEVTRRSQYTGATA----PPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIM  184 (229)
Q Consensus       112 ~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~~----~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil  184 (229)
                      ++.+.....   ....+++|+++. +++..++.    .......+++..+..++.|++.||+|||++||+||||||+|||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NIL  243 (413)
T 3dzo_A          165 MIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV  243 (413)
T ss_dssp             ------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             cccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEE
Confidence            001111111   123456666654 44333331    0111345788888899999999999999999999999999999


Q ss_pred             eeCCCCCCccEEEeecCcceecCcccccceeecccCCCCccc
Q psy11822        185 LVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII  226 (229)
Q Consensus       185 ~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l  226 (229)
                      +    +.++.+||+|||+++..... ....+| +.|+|||++
T Consensus       244 l----~~~~~~kL~DFG~a~~~~~~-~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          244 L----DQRGGVFLTGFEHLVRDGAS-AVSPIG-RGFAPPETT  279 (413)
T ss_dssp             E----CTTCCEEECCGGGCEETTEE-ECCCCC-TTTCCHHHH
T ss_pred             E----ecCCeEEEEeccceeecCCc-cccCCC-CceeCchhh
Confidence            9    88889999999999876554 355678 999999998

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.92  E-value=5.8e-27  Score=188.73  Aligned_cols=136  Identities=10%  Similarity=-0.037  Sum_probs=109.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++.......   ....+.+.+|+..++.++||||+  .+++++..  ....|+||||++
T Consensus        42 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~hp~iv--~~~~~~~~--~~~~~lv~e~~~  114 (286)
T 3uqc_A           42 VPPLQFWQALDTALDRQVALTFVDPQGVLP---DDVLQETLSRTLRLSRIDKPGVA--RVLDVVHT--RAGGLVVAEWIR  114 (286)
T ss_dssp             STTCEEEEEEETTTTEEEEEEESCTTCCSC---HHHHHHHHHHHHHHHTCCCTTBC--CEEEEEEE--TTEEEEEEECCC
T ss_pred             cCCeEEEEEEecCCCceEEEEEECcccccC---HHHHHHHHHHHHHHhcCCCCCcc--eeeEEEEE--CCcEEEEEEecC
Confidence            999999999999999999999987632110   11234678899999999999997  45555443  345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      +++|..++..    + ....++..++.|++.||.|||++||+||||||+|||+    +.++.+||+++|...
T Consensus       115 g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll----~~~g~~kl~~~~~~~  177 (286)
T 3uqc_A          115 GGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV----SIDGDVVLAYPATMP  177 (286)
T ss_dssp             EEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----ETTSCEEECSCCCCT
T ss_pred             CCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE----cCCCCEEEEeccccC
Confidence            9998777654    1 3444678899999999999999999999999999999    777899999887654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=2.3e-26  Score=186.01  Aligned_cols=141  Identities=19%  Similarity=0.200  Sum_probs=111.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccc-ccccCccccceehhhhhhc--ccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPG-EALNHAFVTLAHLVDYAHC--NNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~ni~~~~~~~~~~~--~~~~~~~lv~e  129 (229)
                      |+||.||+|.+..+++.||+|+++..           ..+.+|+.++ +..+||||+.  +++++..  ......++|||
T Consensus        29 G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~e~~~~~~~~~h~~i~~--~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           29 GINGKVLQIFNKRTQEKFALKMLQDC-----------PKARREVELHWRASQCPHIVR--IVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECS-----------HHHHHHHHHHHHHTTSTTBCC--EEEEEEEEETTEEEEEEEEC
T ss_pred             CCCeEEEEEEEcCCCcEEEEEEeccc-----------HHHHHHHHHHHHhccCCCchh--HHhhhhhhcCCCceEEEEEe
Confidence            99999999999999999999998642           1335677777 5569999974  4444432  23456799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      |+++++|..++.... ...+++.++..++.|++.||.|||++||+||||||+||++... ..++.+||+|||++.....
T Consensus        96 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A           96 CLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             CCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-STTCCEEECCCTTCEECTT
T ss_pred             ecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC-CCCCcEEEecccccccccc
Confidence            999999766654422 2358889999999999999999999999999999999999432 2267999999999987754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=3.5e-26  Score=183.78  Aligned_cols=130  Identities=16%  Similarity=0.172  Sum_probs=98.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHH------------hhhhhhhhccccccccccCccccceehhhhhhccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKR------------MLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN  120 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~------------~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~  120 (229)
                      |+||.||+|.+ .+|+.||+|+++.........            ......+.+|+.+++.++|  +   .+.....   
T Consensus       101 G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--~---~v~~~~~---  171 (282)
T 1zar_A          101 GKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--L---AVPKVYA---  171 (282)
T ss_dssp             CSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--S---SSCCEEE---
T ss_pred             CCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--C---CcCeEEe---
Confidence            99999999999 889999999986432110000            0124467899999999984  3   2333322   


Q ss_pred             ccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        121 VKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       121 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      ....++||||+++++|..+ .         ..++..++.|++.||.|||++||+||||||+|||+    + ++.+||+||
T Consensus       172 ~~~~~lvmE~~~g~~L~~l-~---------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl----~-~~~vkl~DF  236 (282)
T 1zar_A          172 WEGNAVLMELIDAKELYRV-R---------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----S-EEGIWIIDF  236 (282)
T ss_dssp             EETTEEEEECCCCEEGGGC-C---------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----E-TTEEEECCC
T ss_pred             ccceEEEEEecCCCcHHHc-c---------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE----E-CCcEEEEEC
Confidence            2446999999999998763 2         13445799999999999999999999999999999    6 779999999


Q ss_pred             Ccceec
Q psy11822        201 GSASHV  206 (229)
Q Consensus       201 g~a~~~  206 (229)
                      |+|+..
T Consensus       237 G~a~~~  242 (282)
T 1zar_A          237 PQSVEV  242 (282)
T ss_dssp             TTCEET
T ss_pred             CCCeEC
Confidence            999754

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.89  E-value=1.6e-24  Score=171.96  Aligned_cols=139  Identities=22%  Similarity=0.209  Sum_probs=102.1

Q ss_pred             CCceeeeeeecCCCCcE--EEEehhhHHHHHHHH------------------HhhhhhhhhccccccccccCccccceeh
Q psy11822         53 DDIGQVNVPTDLEGGEL--LAEKADRREFIDLLK------------------RMLTMDQVERRITPGEALNHAFVTLAHL  112 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~--vaiK~~~~~~~~~~~------------------~~~~~~~~~~Ei~~l~~l~h~ni~~~~~  112 (229)
                      |+||.||+|.+..+|+.  ||||+++........                  .......+.+|+..++.+.|+++..+..
T Consensus        58 G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~  137 (258)
T 1zth_A           58 GKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQP  137 (258)
T ss_dssp             CSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred             cceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence            99999999998678999  999986542111000                  0111235688999999999988754444


Q ss_pred             hhhhhcccccccceeeeeeeC-C----CCCccCCCCCCCCccccCCccchHHHHHHHHHHHH-HCCCccccCCCCCeeee
Q psy11822        113 VDYAHCNNVKASVQMMEVTRR-S----QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK-QLGLIHADLKPENIMLV  186 (229)
Q Consensus       113 ~~~~~~~~~~~~~lv~e~~~~-~----~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH-~~~iiHrDlkp~Nil~~  186 (229)
                      +..      ...++||||+.+ |    ++.....      ..++.++..++.|++.||.||| +.||+||||||+|||+ 
T Consensus       138 ~~~------~~~~lVmE~~g~~g~~~~~L~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl-  204 (258)
T 1zth_A          138 YTY------MKNVLLMEFIGEDELPAPTLVELGR------ELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMY-  204 (258)
T ss_dssp             EEE------ETTEEEEECCEETTEECCBHHHHGG------GGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEE-
T ss_pred             EEc------CCCEEEEEecCCCCCccccHHHHhh------ccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE-
Confidence            422      245899999953 4    2332211      1446678899999999999999 9999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                         +.  .++|+|||+|.....+
T Consensus       205 ---~~--~~~liDFG~a~~~~~~  222 (258)
T 1zth_A          205 ---ID--KVYFIDMGQAVTLRHP  222 (258)
T ss_dssp             ---SS--SEEECCCTTCEETTST
T ss_pred             ---cC--cEEEEECcccccCCCc
Confidence               65  8999999999877543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.77  E-value=1.9e-19  Score=149.29  Aligned_cols=141  Identities=15%  Similarity=0.173  Sum_probs=90.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHH---------------HHHH-hhhhhhhhccccccccccCccccceehhhhh
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFID---------------LLKR-MLTMDQVERRITPGEALNHAFVTLAHLVDYA  116 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~---------------~~~~-~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~  116 (229)
                      |+||.||+|.+. +|+.||||+++.....               .... ....-...+|...|.++.++++..+..+.  
T Consensus       106 Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~--  182 (397)
T 4gyi_A          106 GKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIA--  182 (397)
T ss_dssp             CSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEE--
T ss_pred             CCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeee--
Confidence            999999999974 6999999986531000               0000 00000113344455555444332211111  


Q ss_pred             hcccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-----
Q psy11822        117 HCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-----  191 (229)
Q Consensus       117 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-----  191 (229)
                          ....++||||++++++..+..         .+++..++.|++.+|.+||++|||||||||.|||+....+.     
T Consensus       183 ----~~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~  249 (397)
T 4gyi_A          183 ----QSRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSS  249 (397)
T ss_dssp             ----EETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTS
T ss_pred             ----ccCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccc
Confidence                122479999999888765532         23557899999999999999999999999999999543110     


Q ss_pred             -CccEEEeecCcceecCcc
Q psy11822        192 -PYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       192 -~~~~kl~DFg~a~~~~~~  209 (229)
                       ...+.|+||+-+.....+
T Consensus       250 ~~~~~~iID~~Q~V~~~hp  268 (397)
T 4gyi_A          250 ITLTPIIIXFPQMVSMDHP  268 (397)
T ss_dssp             EEEEEEECCCTTCEETTST
T ss_pred             cccceEEEEeCCcccCCCC
Confidence             114899999988776543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.28  E-value=2.2e-12  Score=106.59  Aligned_cols=140  Identities=14%  Similarity=0.166  Sum_probs=95.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhh--HHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc-cccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADR--REFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV-KASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~-~~~~lv~  128 (229)
                      .|.++.||+....  +..+++|...  ....     ......+.+|+.+++.+...++..+.++.+....+. ...|+||
T Consensus        48 ~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           48 GGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             C-CCSCEEEEECS--SCEEEEECCCC---------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             CcccceEEEEEEC--CceEEEEeCCCCCCCC-----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            3778899998864  5689999876  4211     112235678999998887655544455544432211 3468999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH--------------------------------------
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ--------------------------------------  170 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~--------------------------------------  170 (229)
                      ||++|..+.....     ..++..+...++.+++..|+.||+                                      
T Consensus       121 e~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          121 EFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             ECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            9999987643211     135666677889999999999997                                      


Q ss_pred             --------------------CCCccccCCCCCeeeeCCCCCCc--cEEEeecCcceecC
Q psy11822        171 --------------------LGLIHADLKPENIMLVDPVRQPY--RVKVIDFGSASHVS  207 (229)
Q Consensus       171 --------------------~~iiHrDlkp~Nil~~~~~~~~~--~~kl~DFg~a~~~~  207 (229)
                                          .+++|+|++|+||++    +.++  .+.|+||+.+..-.
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~----~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMF----HPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEE----CSSSSCEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEE----eCCCCcEEEEECccccccCC
Confidence                                358999999999999    4432  46899999987543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.27  E-value=1.5e-12  Score=102.78  Aligned_cols=131  Identities=16%  Similarity=0.105  Sum_probs=93.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+.+.||++...  +..+++|..+....      .....+.+|+.+++.+.. .+..+.++.+..  .....|+||||++
T Consensus        25 ~s~~~v~~~~~~--~~~~vlK~~~~~~~------~~~~~~~~E~~~l~~l~~-~~~vP~v~~~~~--~~~~~~lv~e~i~   93 (263)
T 3tm0_A           25 MSPAKVYKLVGE--NENLYLKMTDSRYK------GTTYDVEREKDMMLWLEG-KLPVPKVLHFER--HDGWSNLLMSEAD   93 (263)
T ss_dssp             CSSSEEEEEECS--SCEEEEEEECGGGT------TSTTCHHHHHHHHHHHTT-TSCCCCEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCCeEEEEECC--CCcEEEEeCCcccC------CCHHHHHHHHHHHHHHhc-CCCCCeEEEEEe--cCCceEEEEEecC
Confidence            556789999754  78999998765210      122356889999988854 233345554443  2345689999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH------------------------------------------
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ------------------------------------------  170 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~------------------------------------------  170 (229)
                      |.++.....        +......++.+++++|+.||+                                          
T Consensus        94 G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (263)
T 3tm0_A           94 GVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK  165 (263)
T ss_dssp             SEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred             CeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence            988654421        123345788999999999998                                          


Q ss_pred             -----------------CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 -----------------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 -----------------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                                       ..++|+|++|+||++    +.+..+.|+||+.+..-
T Consensus       166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~----~~~~~~~lIDwe~a~~g  214 (263)
T 3tm0_A          166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFV----KDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE----ETTEEEEECCCTTCEEE
T ss_pred             CHHHHHHHHHhcCCCCCceEECCCCCcCcEEE----ECCcEEEEEEchhcccC
Confidence                             448999999999999    55456679999988654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.26  E-value=2e-12  Score=101.53  Aligned_cols=129  Identities=16%  Similarity=0.133  Sum_probs=90.8

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|..+.||++.. .+|..+++|+....         ....+.+|+.+++.+.+.++..+.++.+..  .....++||||+
T Consensus        30 gg~~~~v~~~~~-~~g~~~vlK~~~~~---------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~--~~~~~~~v~e~i   97 (264)
T 1nd4_A           30 GCSDAAVFRLSA-QGRPVLFVKTDLSG---------ALNELQDEAARLSWLATTGVPCAAVLDVVT--EAGRDWLLLGEV   97 (264)
T ss_dssp             TTSSCEEEEEEC-TTSCCEEEEEECSC---------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE--CSSCEEEEEECC
T ss_pred             CCCCceEEEEec-CCCCeEEEEeCCcc---------cchhhhHHHHHHHHHHhCCCCCCeEEEecc--CCCCCEEEEEec
Confidence            355689999974 56788999986542         123557888888888655654444544433  223468999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC---------------------------------------
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG---------------------------------------  172 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~---------------------------------------  172 (229)
                      +|.++. . ..         .....++.+++..|+.||+..                                       
T Consensus        98 ~G~~l~-~-~~---------~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (264)
T 1nd4_A           98 PGQDLL-S-SH---------LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA  166 (264)
T ss_dssp             SSEETT-T-SC---------CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred             CCcccC-c-Cc---------CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence            998874 2 11         112367788888888888643                                       


Q ss_pred             -------------------CccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        173 -------------------LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       173 -------------------iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                                         ++|+|++|+||++    +.+..+.|+|||.+...+
T Consensus       167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~----~~~~~~~liD~~~a~~g~  216 (264)
T 1nd4_A          167 PAELFARLKARMPDGEDLVVTHGDACLPNIMV----ENGRFSGFIDCGRLGVAD  216 (264)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE----ETTEEEEECCCTTCEEEE
T ss_pred             HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE----ECCcEEEEEcchhcccCC
Confidence                               8999999999999    555567799999987554

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.81  E-value=8e-10  Score=89.07  Aligned_cols=137  Identities=13%  Similarity=0.076  Sum_probs=89.0

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccc-cccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNV-KASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~-~~~~lv~e  129 (229)
                      .|....||+..     ..+++|+....        .....+.+|+.+++.+ .+..+..+..+......+. ...|+||+
T Consensus        30 ~G~~n~v~~v~-----~~~vlR~~~~~--------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           30 EGNDCIAYEIN-----RDFIFKFPKHS--------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             ECSSEEEEEST-----TSEEEEEESSH--------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred             CCCcceEEEEC-----CEEEEEecCCc--------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence            47788899875     45899986542        1123457888888777 4444443444333222111 23478999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH---------------------------------------
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ---------------------------------------  170 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~---------------------------------------  170 (229)
                      +++|..+.....     ..++..+...++.|++..|+.||+                                       
T Consensus        97 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           97 KIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             CCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             ccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            999988653211     135555566778888888888885                                       


Q ss_pred             -------------------CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        171 -------------------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 -------------------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                                         ..++|+|++|+||++...  ....+.|+||+.+..-++
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~--~~~~~~~iD~~~~~~~~~  226 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE--KNTICGIIDFGDAAISDP  226 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT--TTEEEEECCCTTCEEECT
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC--CCCEEEEEeCCCCccCCh
Confidence                               136999999999999321  045788999999876543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.56  E-value=1.9e-08  Score=81.20  Aligned_cols=138  Identities=17%  Similarity=0.124  Sum_probs=81.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|....||+.     |..+++|+-...        .....+.+|+.+|+.+.+. .+..+..+.+... .....++|||+
T Consensus        29 ~G~~n~v~~v-----g~~~VlR~~~~~--------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~-~~g~~~~v~e~   94 (306)
T 3tdw_A           29 EGFRNYAILV-----NGDWVFRFPKSQ--------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGNPFVGYRK   94 (306)
T ss_dssp             ECSSEEEEEE-----TTTEEEEEESSH--------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-TTSCEEEEEEC
T ss_pred             CCcceeEEEE-----CCEEEEEecCCc--------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-CCCceEEEEec
Confidence            3667788887     467899975332        1123567889898888642 3333333333321 22335799999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC---------------------------------------
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL---------------------------------------  171 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~---------------------------------------  171 (229)
                      ++|..+....-.     .++..+...++.++...|+.||+.                                       
T Consensus        95 i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           95 VQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             CCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             cCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            999876542111     123333344555555555555532                                       


Q ss_pred             ---------------------CCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        172 ---------------------GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       172 ---------------------~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                                           .++|+|++|+||++.........+.|+||+.+..-++
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~  227 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP  227 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence                                 3589999999999933111133458999998876543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.40  E-value=1.5e-07  Score=74.16  Aligned_cols=129  Identities=13%  Similarity=0.151  Sum_probs=82.0

Q ss_pred             eeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeeeCCC
Q psy11822         56 GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQ  135 (229)
Q Consensus        56 g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~  135 (229)
                      +.||+......+..+++|+-+....         ..+.+|+..|+.+. +.+..+.++.+...  ....++|||+++|.+
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~~~~---------~~~~~E~~~l~~l~-~~vPVP~v~~~~~~--~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKGSVA---------NDVTDEMVRLNWLT-AFMPLPTIKHFIRT--PDDAWLLTTAIPGKT  106 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEETHHH---------HHHHHHHHHHHHHT-TTSCCCCEEEEEEE--TTEEEEEEECCCSEE
T ss_pred             CeEEEEEecCCCeEEEEEECCCCCH---------hHHHHHHHHHHHhc-cCCCcCeEEEEEEE--CCeEEEEEEeeCCcc
Confidence            3689888777788899998665321         23467777777774 34544555554433  234689999999876


Q ss_pred             CCccCCCCCCCCccccCCccchHHHHHHHHHHHHHC--------------------------------------------
Q psy11822        136 YTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQL--------------------------------------------  171 (229)
Q Consensus       136 l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~--------------------------------------------  171 (229)
                      +.....       ........+..+++..|+.||+.                                            
T Consensus       107 ~~~~~~-------~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          107 AFQVLE-------EYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             HHHHHH-------HCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             cccccc-------CCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            433211       11112233445555555555531                                            


Q ss_pred             --------------CCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        172 --------------GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       172 --------------~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                                    .++|+|+.+.||++    +..+.+-|+||+.+..-+
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~----~~~~~~~viDwe~a~~gd  225 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIF----DEGKLIGCIDVGRVGIAD  225 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEE----ETTEEEEECCCTTCEEEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEE----ECCeEEEEEECcccccCC
Confidence                          15899999999999    655667799999987543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.15  E-value=9.5e-07  Score=73.63  Aligned_cols=78  Identities=14%  Similarity=-0.025  Sum_probs=41.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHH-HHHHHhhhhhhhhccccccccccC--ccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFI-DLLKRMLTMDQVERRITPGEALNH--AFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~~~~Ei~~l~~l~h--~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|..+.||+++...+++.+++|...+... .........+++.+|+++++.+..  +..+ +.++.+    +....++||
T Consensus        40 ~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~v-P~~~~~----d~~~~~lvm  114 (397)
T 2olc_A           40 DGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLV-PRVFYS----DTEMAVTVM  114 (397)
T ss_dssp             SSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGS-CCEEEE----ETTTTEEEE
T ss_pred             CCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCc-CeEEEE----cCCccEEEE
Confidence            37789999998766678999997653211 000101223455678888877632  2221 233222    122357999


Q ss_pred             eeeeCC
Q psy11822        129 EVTRRS  134 (229)
Q Consensus       129 e~~~~~  134 (229)
                      |++++.
T Consensus       115 E~l~g~  120 (397)
T 2olc_A          115 EDLSHL  120 (397)
T ss_dssp             CCCTTS
T ss_pred             EeCCCc
Confidence            999763

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.00  E-value=1.2e-06  Score=71.93  Aligned_cols=85  Identities=5%  Similarity=-0.042  Sum_probs=47.8

Q ss_pred             ccCCceeeeeeecC---C---CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhccc-cc
Q psy11822         51 CLDDIGQVNVPTDL---E---GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCNN-VK  122 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~---~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~~-~~  122 (229)
                      ..|....+|+....   .   ++..+++|.......   ........+.+|+.+++.+... .+..+.++.+....+ ..
T Consensus        30 ~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~---~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g  106 (357)
T 3ats_A           30 STGMSSETIILTARWQQDGRSIQQKLVARVAPAAED---VPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG  106 (357)
T ss_dssp             TTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGG---CCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred             CCCccceEEEEEEecccCCCCCCceEEEEeCCCCCc---cccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence            34767889987642   0   267899997544210   0000123457788888877432 444444444332221 12


Q ss_pred             ccceeeeeeeCCCCCc
Q psy11822        123 ASVQMMEVTRRSQYTG  138 (229)
Q Consensus       123 ~~~lv~e~~~~~~l~~  138 (229)
                      ..++||||++|..+..
T Consensus       107 ~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          107 TPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SCEEEEECCCCBCCCB
T ss_pred             CceEEEEecCCCChhh
Confidence            3478999999877553

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.97  E-value=3.9e-06  Score=68.09  Aligned_cols=33  Identities=27%  Similarity=0.313  Sum_probs=28.3

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      .+++|+|++++||++    +.++.+.|+||+.+..-.
T Consensus       222 ~~l~HgD~~~~Nil~----~~~~~~~lIDfe~a~~g~  254 (346)
T 2q83_A          222 PNLCHQDYGTGNTLL----GENEQIWVIDLDTVSFDL  254 (346)
T ss_dssp             CCEECSSCSTTSEEE----CGGGCEEECCCTTCEECC
T ss_pred             CceecCCCCcccEEE----eCCCcEEEEehhhcccCC
Confidence            579999999999999    666789999999986543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.39  E-value=8.8e-05  Score=59.71  Aligned_cols=42  Identities=29%  Similarity=0.316  Sum_probs=31.2

Q ss_pred             HHHHHHHHHH-------CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        161 VLTALLKLKQ-------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       161 i~~gl~~LH~-------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +...++.+..       .+++|+|+.++||++    +.+..+.|+||+.+..-
T Consensus       170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~----~~~~~~~lIDf~~a~~g  218 (322)
T 2ppq_A          170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFF----LGDELSGLIDFYFACND  218 (322)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEE----ETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHhhCcccCCcccCCCCCCccCEEE----eCCceEEEecchhccCc
Confidence            4445556653       368999999999999    55545689999988653

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.36  E-value=0.0003  Score=56.73  Aligned_cols=72  Identities=10%  Similarity=0.132  Sum_probs=46.9

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCc-cccceehhhhhhcccccccceeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHA-FVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      .|.+..+|+...  ++..+++|+.....         ...+.+|+..|+.+... .+..+..+.....  ....++||||
T Consensus        46 gG~~n~~y~v~~--~~~~~vlK~~~~~~---------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~--~g~~~lvme~  112 (312)
T 3jr1_A           46 SGEMNEIWLIND--EVQTVFVKINERSY---------RSMFRAEADQLALLAKTNSINVPLVYGIGNS--QGHSFLLLEA  112 (312)
T ss_dssp             CSSSSEEEEEES--SSCEEEEEEEEGGG---------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC--SSEEEEEEEC
T ss_pred             CccceeeeEEEE--CCCeEEEEeCCccc---------HHHHHHHHHHHHHHHhhCCCCcceEEEEeec--CCceEEEEEe
Confidence            477899999875  36789999865421         23457788888777432 3433444444332  2346899999


Q ss_pred             eeCCCC
Q psy11822        131 TRRSQY  136 (229)
Q Consensus       131 ~~~~~l  136 (229)
                      +++...
T Consensus       113 l~G~~~  118 (312)
T 3jr1_A          113 LNKSKN  118 (312)
T ss_dssp             CCCCCC
T ss_pred             ccCCCC
Confidence            998764

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.34  E-value=0.00022  Score=57.52  Aligned_cols=31  Identities=23%  Similarity=0.308  Sum_probs=25.7

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      ..++|+|++++||++    + + .+.|+||+.+..-.
T Consensus       195 ~~l~HgD~~~~Nil~----~-~-~~~lIDfe~a~~g~  225 (328)
T 1zyl_A          195 VLRLHGDCHAGNILW----R-D-GPMFVDLDDARNGP  225 (328)
T ss_dssp             CEECCSSCSGGGEEE----S-S-SEEECCCTTCCEEC
T ss_pred             eeeeeCCCCcccEeE----c-C-CCEEEECCCCCcCc
Confidence            458999999999999    5 3 79999999876543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.24  E-value=0.0001  Score=61.11  Aligned_cols=178  Identities=8%  Similarity=-0.020  Sum_probs=88.4

Q ss_pred             ccceeeeeccccccccCCCCCccccCCCCCCCccCcccccceeecccCCceeeeeeecCC-------CCcEEEEehhhHH
Q psy11822          6 DRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLE-------GGELLAEKADRRE   78 (229)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~fg~Vy~a~~~~-------~~~~vaiK~~~~~   78 (229)
                      ..+.+..++..++|...-.|.|.-......          .......|.-..+|++....       +++.+++|+....
T Consensus        24 ~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l----------~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~   93 (379)
T 3feg_A           24 SLSRDAERRAYQWCREYLGGAWRRVQPEEL----------RVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI   93 (379)
T ss_dssp             --CHHHHHHHHHHHHHHHCGGGGGCCGGGC----------CCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--
T ss_pred             ccChHHHHHHHHHHHHHccCcCCCCCcCce----------EEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc
Confidence            344456666777787755566653211100          00011124445678877532       3578999985331


Q ss_pred             HHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeeeCCCCCcc------------------C
Q psy11822         79 FIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGA------------------T  140 (229)
Q Consensus        79 ~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~------------------~  140 (229)
                             ......+.+|.++++.+...++. +.++.++.  +    .+||||++|..+...                  .
T Consensus        94 -------~~~~~~~~rE~~vl~~L~~~gv~-P~ll~~~~--~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH  159 (379)
T 3feg_A           94 -------LQGVDSLVLESVMFAILAERSLG-PQLYGVFP--E----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFH  159 (379)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHTTSS-CCEEEEET--T----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHH
T ss_pred             -------cchHHHHHHHHHHHHHHHhcCCC-CeEEEEcC--C----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHh
Confidence                   11223346788888777544443 44443322  2    289999998654321                  0


Q ss_pred             CCCCCCCc-c--ccCCccchHHHHH-------------------HHHHHHH----H----CCCccccCCCCCeeeeCCCC
Q psy11822        141 APPPPAQV-L--VPAPPGNVTLQVL-------------------TALLKLK----Q----LGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       141 ~~~~~~~~-l--~~~~~~~i~~qi~-------------------~gl~~LH----~----~~iiHrDlkp~Nil~~~~~~  190 (229)
                      ....+... .  .+.++..+..++.                   ..+..|.    .    ..++|+|+.++||++...++
T Consensus       160 ~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~  239 (379)
T 3feg_A          160 GMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPE  239 (379)
T ss_dssp             TCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC-
T ss_pred             CCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCC
Confidence            11000000 0  0111122222221                   1233332    1    24899999999999954322


Q ss_pred             CCccEEEeecCcceecC
Q psy11822        191 QPYRVKVIDFGSASHVS  207 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~  207 (229)
                      ..+.+.|+||..|..-.
T Consensus       240 ~~~~~~~IDwE~a~~~~  256 (379)
T 3feg_A          240 NADSLMLVDFEYSSYNY  256 (379)
T ss_dssp             --CCEEECCCTTCEEEE
T ss_pred             ccCcEEEEecccCCcCC
Confidence            33689999999987543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.98  E-value=0.00083  Score=54.66  Aligned_cols=34  Identities=21%  Similarity=0.389  Sum_probs=28.2

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ..++|+|+.++||++    +.++.+.|+||+.+..-++
T Consensus       206 ~~~~HgD~~~~N~l~----~~~~~~~~iD~e~~~~~~~  239 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLV----GNEESIYIIDWDEPMLAPK  239 (339)
T ss_dssp             CEEECSCCCGGGEEE----CGGGCEEECCCSSCEEECT
T ss_pred             ceeEeCCCCcCCEEE----eCCCeEEEEECCCCeeCCH
Confidence            358999999999999    6556899999998875543

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.97  E-value=0.00017  Score=57.57  Aligned_cols=31  Identities=19%  Similarity=0.187  Sum_probs=24.8

Q ss_pred             CccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        173 LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ++|+|+.|+||+.    +. +.+.|+||..+..-++
T Consensus       175 l~HgDl~~~Nil~----~~-~~~~lID~e~a~~g~~  205 (301)
T 3dxq_A          175 ACHCDPLCENFLD----TG-ERMWIVDWEYSGMNDP  205 (301)
T ss_dssp             EECSCCCGGGEEE----CS-SCEEECCCTTCEEECT
T ss_pred             eeccCCCcCCEEE----CC-CCEEEEecccccCCCH
Confidence            7999999999995    32 3679999998875443

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.95  E-value=0.00034  Score=55.45  Aligned_cols=70  Identities=10%  Similarity=-0.096  Sum_probs=43.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |..+.||+.+. .+|+.|.+|+-+...      ......+.+|+..|+.+. ...+..+.++..  +    .-++||||+
T Consensus        26 G~~~~vyrv~l-~DG~~~~vK~~~~~~------~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~----~~~lv~e~l   92 (288)
T 3f7w_A           26 SHRWHLYRVEL-ADGTPLFVKALPDDA------PALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D----DRTLAMEWV   92 (288)
T ss_dssp             ETTEEEEEEEE-TTSCEEEEEECCTTC------CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E----TTEEEEECC
T ss_pred             CCCeEEEEEEE-CCCCEEEEEEeCCCC------cchhhHHHHHHHHHHHHHhhCCCCcceEEec--c----CceEEEEee
Confidence            77889999985 578999999754320      112234577888887773 223333333322  1    237899999


Q ss_pred             eCCC
Q psy11822        132 RRSQ  135 (229)
Q Consensus       132 ~~~~  135 (229)
                      +++.
T Consensus        93 ~~~~   96 (288)
T 3f7w_A           93 DERP   96 (288)
T ss_dssp             CCCC
T ss_pred             cccC
Confidence            8764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.86  E-value=0.0036  Score=52.33  Aligned_cols=34  Identities=29%  Similarity=0.294  Sum_probs=28.2

Q ss_pred             HCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        170 QLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       170 ~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ...++|+|++|+|||+    +.++ +.|+||+.+..-++
T Consensus       231 ~~~liHGDl~~~Nil~----~~~~-~~lID~e~a~~G~p  264 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMV----TQDS-TQVIDPEFSFYGPM  264 (420)
T ss_dssp             CCEEECSCCSGGGEEE----CSSC-EEECCCTTCEEECH
T ss_pred             CCeEEecCCCCCcEEE----eCCC-CEEEeCcccccCch
Confidence            4679999999999999    5544 99999999876543

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=94.63  E-value=0.028  Score=46.70  Aligned_cols=35  Identities=26%  Similarity=0.378  Sum_probs=27.4

Q ss_pred             CccccCCCCCeeeeCCC--CCCccEEEeecCcceecC
Q psy11822        173 LIHADLKPENIMLVDPV--RQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~--~~~~~~kl~DFg~a~~~~  207 (229)
                      ++|+|+.++||++....  +....+.++||..|..-.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~  282 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNY  282 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCC
Confidence            47999999999996431  345689999999997653

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.31  E-value=0.019  Score=46.19  Aligned_cols=38  Identities=26%  Similarity=0.413  Sum_probs=28.0

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ..++|+|+.++||++.........+.|+||+.+..-+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            46999999999999932111125899999999876543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=92.67  E-value=0.043  Score=44.77  Aligned_cols=30  Identities=27%  Similarity=0.417  Sum_probs=24.6

Q ss_pred             CCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        172 GLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       172 ~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      .++|+|+.++|||+    +.+ .+.|+||..+..-
T Consensus       213 ~l~HgDl~~~Nil~----~~~-~~~lID~e~a~~g  242 (369)
T 3c5i_A          213 VFCHNDLQENNIIN----TNK-CLRLIDFEYSGFN  242 (369)
T ss_dssp             EEECSCCCGGGEEE----CC--CEEECCCTTCEEE
T ss_pred             EEEeCCCCcccEEe----cCC-cEEEEEecCCCCC
Confidence            58999999999999    543 4899999988654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.06  E-value=0.018  Score=48.92  Aligned_cols=58  Identities=10%  Similarity=0.016  Sum_probs=13.1

Q ss_pred             ccCCceeeeeeecCCCCcEEEE------ehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehh
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAE------KADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLV  113 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vai------K~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~  113 (229)
                      .+| ||.||+|.+.....+||+      |..+.....    ......+.+|+.+++.++|||++..|-+
T Consensus       149 ~lG-fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~----~e~~~~~~rea~l~~~~~H~niv~~h~f  212 (463)
T 3cxl_A          149 HVG-YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS----EKRLTSLVRRATLKENEQIPKYEKIHNF  212 (463)
T ss_dssp             TSS-BCCC---------CCBGGGC---------------------------------------CBCCCE
T ss_pred             cCC-chhhhcccccccCCchhhhhccCcccccccccc----ccccccccccccccccccccccCCCcce
Confidence            347 999999998755568888      654432211    2223356788888899999999865543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=91.70  E-value=0.07  Score=45.17  Aligned_cols=70  Identities=9%  Similarity=-0.019  Sum_probs=40.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |--..+|++....++..+++|+....      .....++ .+|..+++.+...++. +.++..+.  +    ..||||++
T Consensus       119 G~tN~~y~v~~~~~~~~~vLRi~g~~------~~~~idR-~~E~~vl~~L~~~gl~-P~ll~~~~--~----G~v~e~I~  184 (458)
T 2qg7_A          119 GITNILIKVKDMSKQAKYLIRLYGPK------TDEIINR-EREKKISCILYNKNIA-KKIYVFFT--N----GRIEEFMD  184 (458)
T ss_dssp             --CEEEEEEEETTTTEEEEEEEECC-------CCSCSCH-HHHHHHHHHHTTSSSB-CCEEEEET--T----EEEEECCC
T ss_pred             CeEeEEEEEEECCCCceEEEEECCCC------hhhhcCH-HHHHHHHHHHHhcCCC-CCEEEEeC--C----eEEEEeeC
Confidence            44467999886544588999976431      0111111 4778888877655553 34443321  1    25999999


Q ss_pred             CCCC
Q psy11822        133 RSQY  136 (229)
Q Consensus       133 ~~~l  136 (229)
                      |..+
T Consensus       185 G~~l  188 (458)
T 2qg7_A          185 GYAL  188 (458)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            7554

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=91.14  E-value=0.056  Score=45.33  Aligned_cols=69  Identities=7%  Similarity=-0.122  Sum_probs=39.0

Q ss_pred             CCceeeeeeecCC-------CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccc
Q psy11822         53 DDIGQVNVPTDLE-------GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      |.-..+|++....       ++..+++|+....        ...+.+.+|..+++.+...++. +.++..+.  +    .
T Consensus        84 G~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--------~~~~~li~E~~~l~~L~~~g~~-P~l~~~~~--~----g  148 (429)
T 1nw1_A           84 GMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--------ETESHLVAESVIFTLLSERHLG-PKLYGIFS--G----G  148 (429)
T ss_dssp             CTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--------CCHHHHHHHHHHHHHHHHTTSS-SCEEEEET--T----E
T ss_pred             CcccceEEEEeCCCccccCCCCceEEEEEeCCC--------CcHHHHHHHHHHHHHHHhCCCC-CcEEEEeC--C----C
Confidence            5557899987542       2578999986331        0001234577777766444442 33332221  1    3


Q ss_pred             eeeeeeeCCCC
Q psy11822        126 QMMEVTRRSQY  136 (229)
Q Consensus       126 lv~e~~~~~~l  136 (229)
                      +|+||++|..+
T Consensus       149 ~v~e~l~G~~l  159 (429)
T 1nw1_A          149 RLEEYIPSRPL  159 (429)
T ss_dssp             EEECCCCEEEC
T ss_pred             EEEEEeCCccc
Confidence            88999987443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	229
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.004
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-15
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-13
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-11
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	0.001
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	0.001
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.003
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.003
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.001
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	0.001
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.001
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.001
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	9e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	0.003
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.001
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.001
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.003

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 5e-15
 Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 16/175 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V +  + +   +LA K   +  ++   +     Q+ R +     L H  +    L  Y
Sbjct: 20  GNVYLAREKQSKFILALKVLFKAQLE---KAGVEHQLRREVEIQSHLRHPNI--LRLYGY 74

Query: 116 AHCNNVKASVQ-MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
            H       +     +    +     +     +            ++  AL       +I
Sbjct: 75  FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA------TYITELANALSYCHSKRVI 128

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           H D+KPEN++L         +K+ DFG + H   +   T   +  Y  PE+I G 
Sbjct: 129 HRDIKPENLLLGSA----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
              DL+ R+L  +   +R    E L H ++T
Sbjct: 230 GARDLISRLLKHN-PSQRPMLREVLEHPWIT 259

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 9e-15
 Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 7/174 (4%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V     +     +A K   ++ I     +    +V   +   + ++  F  +  L+D+
Sbjct: 18  GSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 77

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
               +    +       +  +   T      + L      +   QVL A+      G++H
Sbjct: 78  FERPDSFVLILERPEPVQDLFDFITERGALQEELA----RSFFWQVLEAVRHCHNCGVLH 133

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
            D+K ENI++         +K+IDFGS + +   V   +  +R Y  PE I   
Sbjct: 134 RDIKDENILID---LNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 184

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 8e-14
 Identities = 32/176 (18%), Positives = 70/176 (39%), Gaps = 19/176 (10%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V   +    G ++A K    E    ++     +Q+ R +      N  ++        
Sbjct: 20  GVVFKVSHKPSGLVMARKLIHLEIKPAIR-----NQIIRELQVLHECNSPYI--VGFYGA 72

Query: 116 AHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGL 173
            + +   +   + M+     Q        P   +        V++ V+  L  L++   +
Sbjct: 73  FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------KVSIAVIKGLTYLREKHKI 126

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           +H D+KP NI++         +K+ DFG +  +  ++ N+++ +R Y +PE + G 
Sbjct: 127 MHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 22/105 (20%), Positives = 33/105 (31%), Gaps = 8/105 (7%)

Query: 4   TDDRKLEIVEGTSRFCHNWCYPRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTD 63
            D ++LE++ G          P R  T      +          IF  LD I     P  
Sbjct: 206 PDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK- 264

Query: 64  LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
                 L       EF D + + L  +    R    + + HAF+ 
Sbjct: 265 ------LPSGVFSLEFQDFVNKCLIKN-PAERADLKQLMVHAFIK 302

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 6e-13
 Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 22/179 (12%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V +  +    E +A K      +D+ + +   + +++ I   + LNH  V       +
Sbjct: 19  GEVQLAVNRVTEEAVAVK-----IVDMKRAVDCPENIKKEICINKMLNHENVV--KFYGH 71

Query: 116 AHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
               N++    +                 P               Q++  ++ L  +G+ 
Sbjct: 72  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ------RFFHQLMAGVVYLHGIGIT 125

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHV----SKAVCNTYLQSRYYRAPEIILGE 229
           H D+KPEN++L +       +K+ DFG A+       + + N    +  Y APE++   
Sbjct: 126 HRDIKPENLLLDE----RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 24/202 (11%)

Query: 35  PETS-IKSKEARKYIFNCLDDIGQ-----VNVPTDLEGGELLAEKADRREFIDLLKRMLT 88
           P+ + +  K+  + +F+ L +IG      V    D+   E++A K          ++   
Sbjct: 2   PDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-- 59

Query: 89  MDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQ 147
              + + +   + L H               +    V +    +          P    +
Sbjct: 60  -QDIIKEVRFLQKLRHPNT--IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE 116

Query: 148 VLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS 207
           +        VT   L  L  L    +IH D+K  NI+L +    P  VK+ DFGSAS ++
Sbjct: 117 IA------AVTHGALQGLAYLHSHNMIHRDVKAGNILLSE----PGLVKLGDFGSASIMA 166

Query: 208 KAVCNTYLQSRYYRAPEIILGE 229
            A  N+++ + Y+ APE+IL  
Sbjct: 167 PA--NSFVGTPYWMAPEVILAM 186

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 1e-11
 Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 22/178 (12%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V    + E   L A K    +  + L+  +     E  I    + +H  +    L+D 
Sbjct: 26  GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV----EIDIL--ASCDHPNI--VKLLDA 77

Query: 116 AHCNNVKASVQ--MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
            +  N    +          +       P   +Q+        V  Q L AL  L    +
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ------VVCKQTLDALNYLHDNKI 131

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILGE 229
           IH DLK  NI+          +K+ DFG ++  ++ +   ++++ + Y+ APE+++ E
Sbjct: 132 IHRDLKAGNILFTL----DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 185

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
            F D LK+ L  + V+ R T  + L H FVT
Sbjct: 244 NFKDFLKKCLEKN-VDARWTTSQLLQHPFVT 273

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.1 bits (145), Expect = 3e-11
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 19/177 (10%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V+  T+   G   A K          + +      E +      L H  +   +L D 
Sbjct: 40  GVVHRVTERATGNNFAAKFVMTPHESDKETVRK----EIQTM--SVLRHPTL--VNLHDA 91

Query: 116 AHCNNVKASVQ--MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
              +N    +   M       +           + +          QV   L  + +   
Sbjct: 92  FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV------EYMRQVCKGLCHMHENNY 145

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIILGE 229
           +H DLKPENIM     ++   +K+IDFG  +H+  K        +  + APE+  G+
Sbjct: 146 VHLDLKPENIMFTT--KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 200

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 77  REFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQY 136
            +  D ++++L  D    R+T  +AL H ++T  +              ++ +  +    
Sbjct: 254 EDGKDFIRKLLLADP-NTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYD 312

Query: 137 TGATAPPPPAQV 148
                 PP  ++
Sbjct: 313 AWPEPLPPLGRI 324

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 5e-11
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 156 NVTLQVLTAL--LKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT 213
           +   Q+L  L  L  +   +IH DLK +NI +  P      VK+ D G A+    +    
Sbjct: 116 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRASFAKA 172

Query: 214 YLQSRYYRAPEIILGE 229
            + +  + APE+   +
Sbjct: 173 VIGTPEFMAPEMYEEK 188

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 6e-11
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV-SKAVCNTY 214
            +   +  A+  L  + + H D+KPEN++     R    +K+ DFG A    S     T 
Sbjct: 115 EIMKSIGEAIQYLHSINIAHRDVKPENLLY-TSKRPNAILKLTDFGFAKETTSHNSLTTP 173

Query: 215 LQSRYYRAPEIILGE 229
             + YY APE++  E
Sbjct: 174 CYTPYYVAPEVLGPE 188

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           E   L++ +L  +   +R+T  E +NH ++ 
Sbjct: 247 EVKMLIRNLLKTE-PTQRMTITEFMNHPWIM 276

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.4 bits (138), Expect = 2e-10
 Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 17/175 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V++      G   A K  ++E +  LK++   +           + H F+    +   
Sbjct: 18  GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV---EHTNDERLMLSIVTHPFI--IRMWGT 72

Query: 116 AHCNNVKASVQM-MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
                    +   +E          +   P               +V  AL  L    +I
Sbjct: 73  FQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF------YAAEVCLALEYLHSKDII 126

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           + DLKPENI+L         +K+ DFG A +V   V  T   +  Y APE++  +
Sbjct: 127 YRDLKPENILLDK----NGHIKITDFGFAKYVPD-VTYTLCGTPDYIAPEVVSTK 176

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 55.6 bits (133), Expect = 7e-10
 Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 24/184 (13%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G +   T+L   + +A K           R     Q+       + L      + ++  +
Sbjct: 19  GVIFEGTNLLNNQQVAIK--------FEPRRSDAPQLRDEYRTYKLLAGCTG-IPNVYYF 69

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
                    V  +                  + +          Q+L  +  + +  L++
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVA-----MAAKQMLARVQSIHEKSLVY 124

Query: 176 ADLKPENIMLVDP-VRQPYRVKVIDFGSA---------SHVSKAVCNTYLQSRYYRAPEI 225
            D+KP+N ++  P  +    + V+DFG            H+          +  Y +   
Sbjct: 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT 184

Query: 226 ILGE 229
            LG 
Sbjct: 185 HLGR 188

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 8e-10
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 20/179 (11%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
             V +  +L      A K   +  I + +  +     ER +     L+H F     L   
Sbjct: 22  STVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVM--SRLDHPFFV--KLYFT 76

Query: 116 AHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
              +          +     +Y                     T ++++AL  L   G+I
Sbjct: 77  FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR------FYTAEIVSALEYLHGKGII 130

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVS----KAVCNTYLQSRYYRAPEIILGE 229
           H DLKPENI+L     +   +++ DFG+A  +S    +A  N+++ +  Y +PE++  +
Sbjct: 131 HRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
             V    +   G   A K  ++      +R ++ + +ER ++  + + H  V    L + 
Sbjct: 24  AVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI--TLHEV 81

Query: 116 AHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
                    + +++       +          +            Q+L  +  L  L + 
Sbjct: 82  YENKTDVILILELVAGGELFDFLAEKESLTEEEAT------EFLKQILNGVYYLHSLQIA 135

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 229
           H DLKPENIML+D      R+K+IDFG A  +           +  + APEI+  E
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 8/30 (26%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFV 107
              D ++R+L  D  ++R+T  ++L H ++
Sbjct: 246 LAKDFIRRLLVKD-PKKRMTIQDSLQHPWI 274

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.7 bits (131), Expect = 1e-09
 Identities = 28/174 (16%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V      + G++ A K   ++ I + +           ++     +  F+    +   
Sbjct: 18  GEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV--CMSYA 75

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
            H  + K S  +  +     +   +     ++  +         +++  L  +    +++
Sbjct: 76  FHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMR----FYAAEIILGLEHMHNRFVVY 130

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
            DLKP NI+L +       V++ D G A   SK   +  + +  Y APE++   
Sbjct: 131 RDLKPANILLDE----HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 180

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 2e-09
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 18/182 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+         G++L  K      +   ++      +   +     L H  +   +    
Sbjct: 18  GRCQKIRRKSDGKILVWKELDYGSMTEAEK----QMLVSEVNLLRELKHPNIVRYYDRII 73

Query: 116 AHCNNVKASVQMME-VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG-- 172
              N     V  ME        +  T      Q L       V  Q+  AL +  +    
Sbjct: 74  DRTNTTLYIV--MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 131

Query: 173 ---LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK--AVCNTYLQSRYYRAPEIIL 227
              ++H DLKP N+ L         VK+ DFG A  ++   +    ++ + YY +PE + 
Sbjct: 132 GHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMN 187

Query: 228 GE 229
             
Sbjct: 188 RM 189

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 2e-09
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VC 211
           ++  Q    +  L    +IH DLK  NI L     +   VK+ DFG A+  S+       
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSGSHQF 163

Query: 212 NTYLQSRYYRAPEIILGE 229
                S  + APE+I  +
Sbjct: 164 EQLSGSILWMAPEVIRMQ 181

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 19/177 (10%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V+   +   G +   K     +      +      E  I     L+H  +   +L D 
Sbjct: 43  GVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN----EISIM--NQLHHPKL--INLHDA 94

Query: 116 AHCNNVKASVQ--MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                    +   +       +          A+V+      N   Q    L  + +  +
Sbjct: 95  FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI------NYMRQACEGLKHMHEHSI 148

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-AVCNTYLQSRYYRAPEIILGE 229
           +H D+KPENIM      +   VK+IDFG A+ ++   +      +  + APEI+  E
Sbjct: 149 VHLDIKPENIMCETK--KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 203

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYT 137
           E  D +K +L  +   +R+T  +AL H ++      D+++  +   S +  ++ ++ +  
Sbjct: 258 EAKDFIKNLLQKEP-RKRLTVHDALEHPWLK----GDHSNLTSRIPSSRYNKIRQKIKEK 312

Query: 138 GATAPPPPAQV 148
            A  P P   +
Sbjct: 313 YADWPAPQPAI 323

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 4e-09
 Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 19/178 (10%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V +    +  +  A KA +++ + L+   +    VE+R+    A  H F+T  H+   
Sbjct: 16  GKVFLAEFKKTNQFFAIKALKKDVV-LMDDDVECTMVEKRVL-SLAWEHPFLT--HMFCT 71

Query: 116 AHCNNVKASVQMMEVTRRS--QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                      M  +       +  +      ++            +++  L  L   G+
Sbjct: 72  FQTKE-NLFFVMEYLNGGDLMYHIQSCHKFDLSRAT------FYAAEIILGLQFLHSKGI 124

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 229
           ++ DLK +NI+    + +   +K+ DFG         A  NT+  +  Y APEI+LG+
Sbjct: 125 VYRDLKLDNIL----LDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ 178

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 5e-09
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 20/176 (11%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V    D+  G+ +A +    +     + ++     E  +       +  +   + +D 
Sbjct: 34  GTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN----EILVM--RENKNPNI--VNYLDS 85

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
               +    V                     Q+        V  + L AL  L    +IH
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA------AVCRECLQALEFLHSNQVIH 139

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVS--KAVCNTYLQSRYYRAPEIILGE 229
            D+K +NI+L         VK+ DFG  + ++  ++  +T + + Y+ APE++  +
Sbjct: 140 RDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVTLAH 111
            F D L R L MD VE+R +  E L H F+ +A 
Sbjct: 245 IFRDFLNRCLDMD-VEKRGSAKELLQHQFLKIAK 277

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 6e-09
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 20/180 (11%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAF-VTLAHLVD 114
           G V    D      +A K      I   +      +  R I       H   + +  ++ 
Sbjct: 22  GMVCSAYDNVNKVRVAIK-----KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 76

Query: 115 YAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
                 +K    +  +     Y            +          Q+L  L  +    ++
Sbjct: 77  APTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHIC-----YFLYQILRGLKYIHSANVL 131

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSA-----SHVSKAVCNTYLQSRYYRAPEIILGE 229
           H DLKP N++L         +K+ DFG A      H        Y+ +R+YRAPEI+L  
Sbjct: 132 HRDLKPSNLLLNT----TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 187

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           + +DLL +MLT +   +RI   +AL H ++ 
Sbjct: 270 KALDLLDKMLTFN-PHKRIEVEQALAHPYLE 299

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 8e-09
 Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 17/175 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V +    E G   A K   ++ +  LK++      E+RI   +A+N  F+    L   
Sbjct: 55  GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRIL--QAVNFPFLV--KLEFS 109

Query: 116 AHCNNVKASVQMMEVTRR-SQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
              N+    V           +                       Q++     L  L LI
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR------FYAAQIVLTFEYLHSLDLI 163

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           + DLKPEN+++     Q   ++V DFG A  V      T   +    APEIIL +
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVKGR-TWTLCGTPEALAPEIILSK 213

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 9e-09
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 16/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
             V    D    +++A K  +       K  +      R I   + L+H  +    L+D 
Sbjct: 12  ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGIN-RTALREIKLLQELSHPNII--GLLDA 68

Query: 116 AHCNNVKASVQ-MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
               +  + V   ME          +    P+ +          L  L  L  L Q  ++
Sbjct: 69  FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIK------AYMLMTLQGLEYLHQHWIL 122

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--VCNTYLQSRYYRAPEIILG 228
           H DLKP N++L     +   +K+ DFG A             + +R+YRAPE++ G
Sbjct: 123 HRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG 174

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 7/31 (22%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           + +DL++ +   +    RIT  +AL   + +
Sbjct: 255 DLLDLIQGLFLFNP-CARITATQALKMKYFS 284

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 51.6 bits (123), Expect = 1e-08
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
            +   +L  +  L +L ++H DLKPENI+L         +K+ DFG +  +         
Sbjct: 114 KIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDPGEKLREV 169

Query: 215 LQSRYYRAPEIILGE 229
             +  Y APEII   
Sbjct: 170 CGTPSYLAPEIIECS 184

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 24/183 (13%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G + + TD+  GE +A K      ++ +K       +E +I   + +             
Sbjct: 21  GDIYLGTDIAAGEEVAIK------LECVKTKHPQLHIESKIY--KMMQGGVGIPTIRWCG 72

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
           A  +     ++++  +    +   +       VL+ A       Q+++ +  +     IH
Sbjct: 73  AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA------DQMISRIEYIHSKNFIH 126

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---------VCNTYLQSRYYRAPEII 226
            D+KP+N ++    ++   V +IDFG A     A                +  Y +    
Sbjct: 127 RDVKPDNFLMGLG-KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH 185

Query: 227 LGE 229
           LG 
Sbjct: 186 LGI 188

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 15/181 (8%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAF-VTLAHLVD 114
           G+V      + G+ +A K    E     +        E +I   + L H   V L  +  
Sbjct: 24  GEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKIL--QLLKHENVVNLIEICR 79

Query: 115 YAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
                  +    +  V    ++  A            +    V   +L  L  + +  ++
Sbjct: 80  TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 139

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA------VCNTYLQSRYYRAPEIILG 228
           H D+K  N+++     +   +K+ DFG A   S A           + + +YR PE++LG
Sbjct: 140 HRDMKAANVLIT----RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG 195

Query: 229 E 229
           E
Sbjct: 196 E 196

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 25  PRRALTKIGLPETSIKSKEARKYIFNCLDDIGQVNVPTDLEGGELLAEKADRREFIDLLK 84
            +  L  I     SI  +         L +  ++      +  + L         +DL+ 
Sbjct: 227 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 286

Query: 85  RMLTMDQVERRITPGEALNHAFVTLAHL 112
           ++L +D   +RI   +ALNH F     +
Sbjct: 287 KLLVLDP-AQRIDSDDALNHDFFWSDPM 313

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
             +L V  A+  L+    +H DL   N+++     +    KV DFG     S    +T  
Sbjct: 107 KFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASST-QDTGK 161

Query: 216 QSRYYRAPEIILGE 229
               + APE +  +
Sbjct: 162 LPVKWTAPEALREK 175

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 3e-08
 Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 16/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G+V +  +   G   A K  R+E I + K  +     E R+   +   H F+T       
Sbjct: 19  GKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVL--QNTRHPFLTALKYAFQ 75

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
            H + +   ++         +          +            ++++AL  L    +++
Sbjct: 76  TH-DRLCFVMEYANGGELFFHLSRERVFTEERAR------FYGAEIVSALEYLHSRDVVY 128

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHV--SKAVCNTYLQSRYYRAPEIILGE 229
            D+K EN+ML     +   +K+ DFG         A   T+  +  Y APE++   
Sbjct: 129 RDIKLENLML----DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 5e-08
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 26/182 (14%)

Query: 56  GQVNVPTDLEGGELLA-------EKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           G V      + GEL+A       ++   RE + +++++   + V         L + F +
Sbjct: 34  GVVYQAKLCDSGELVAIKKVLQDKRFKNRE-LQIMRKLDHCNIVR--------LRYFFYS 84

Query: 109 LAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKL 168
                D  + N V   V          Y+ A    P   V           Q+  +L  +
Sbjct: 85  SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK------LYMYQLFRSLAYI 138

Query: 169 KQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIIL 227
              G+ H D+KP+N++L         +K+ DFGSA  + +     +Y+ SRYYRAPE+I 
Sbjct: 139 HSFGICHRDIKPQNLLLDP---DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 195

Query: 228 GE 229
           G 
Sbjct: 196 GA 197

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           E I L  R+L       R+TP EA  H+F
Sbjct: 278 EAIALCSRLLEYTP-TARLTPLEACAHSF 305

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 21/108 (19%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIML 185
           +  E     +            VL          QV   +  L+    +H DL   N+++
Sbjct: 138 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 197

Query: 186 VDPVRQPYRVKVIDFGSA----SHVSKAVCNTYLQSRYYRAPEIILGE 229
                    VK+ DFG A    S  +  V         + APE +   
Sbjct: 198 ----THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG 241

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 16/175 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V    +   GE++A K  R +     + + +    E  +   + LNH  +    L+D 
Sbjct: 16  GVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLL--KELNHPNI--VKLLDV 69

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
            H  N    V         ++  A+A       L+     +   Q+L  L       ++H
Sbjct: 70  IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI----KSYLFQLLQGLAFCHSHRVLH 125

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILG 228
            DLKP+N+++         +K+ DFG A      V      + + +YRAPEI+LG
Sbjct: 126 RDLKPQNLLINT----EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           +   LL +ML  D   +RI+   AL H F
Sbjct: 258 DGRSLLSQMLHYDP-NKRISAKAALAHPF 285

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-07
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V    + E  E++A K  R +  D            R I   + L H  +   H V +
Sbjct: 16  GTVFKAKNRETHEIVALKRVRLDDDDEGVP----SSALREICLLKELKHKNIVRLHDVLH 71

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
           +          +  V                  L P    +   Q+L  L       ++H
Sbjct: 72  SDKK-------LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNTYLQSRYYRAPEIILGE 229
            DLKP+N+++     +   +K+ +FG A      V   +  + + +YR P+++ G 
Sbjct: 125 RDLKPQNLLI----NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
              DLL+ +L  +   +RI+  EAL H + +
Sbjct: 258 TGRDLLQNLLKCNP-VQRISAEEALQHPYFS 287

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 18/179 (10%)

Query: 56  GQVNVPTDLEGGELLAEK-ADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVD 114
           G V     +  GE +    A +   +          ++        ++++  V    L+ 
Sbjct: 23  GTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVC--RLLG 78

Query: 115 YAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
               + V+   Q+M       Y         +Q L+     N  +Q+   +  L+   L+
Sbjct: 79  ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-----NWCVQIAKGMNYLEDRRLV 133

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----AVCNTYLQSRYYRAPEIILGE 229
           H DL   N+++      P  VK+ DFG A  +                 + A E IL  
Sbjct: 134 HRDLAARNVLVKT----PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 5e-07
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTY 214
           ++  Q+L  L  L    ++H DLKP+NI++        ++K+ DFG A   S      + 
Sbjct: 120 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS----SGQIKLADFGLARIYSFQMALTSV 175

Query: 215 LQSRYYRAPEIILGE 229
           + + +YRAPE++L  
Sbjct: 176 VVTLWYRAPEVLLQS 190

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
              DLL + LT +   +RI+   AL+H +
Sbjct: 268 LGKDLLLKCLTFNP-AKRISAYSALSHPY 295

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 14/125 (11%)

Query: 108 TLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLK 167
            L   +     + V +       TR    +    P   A+ L       +  QV   +  
Sbjct: 102 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQL------CIARQVAAGMAY 155

Query: 168 LKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAP 223
           L +   +H DL   N ++     +   VK+ DFG + ++  A              +  P
Sbjct: 156 LSERKFVHRDLATRNCLV----GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 211

Query: 224 EIILG 228
           E I  
Sbjct: 212 ESIFY 216

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 8e-07
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 20/177 (11%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
           G V+   +    +    K  + +  D          V++ I+      H  +   HL + 
Sbjct: 19  GIVHRCVETSSKKTYMAKFVKVKGTD-------QVLVKKEISILNIARHRNIL--HLHES 69

Query: 116 AHCNNVKASVQ--MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                    +   +  +    +   +       +++      +   QV  AL  L    +
Sbjct: 70  FESMEELVMIFEFISGLDIFERINTSAFELNEREIV------SYVHQVCEALQFLHSHNI 123

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 229
            H D++PENI+     R+   +K+I+FG A  +           +  Y APE+   +
Sbjct: 124 GHFDIRPENIIYQT--RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
           E +D + R+L  ++ + R+T  EAL H ++ 
Sbjct: 233 EAMDFVDRLLVKER-KSRMTASEALQHPWLK 262

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.6 bits (109), Expect = 9e-07
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 14/183 (7%)

Query: 56  GQVNVPTDLEGGELLA------EKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTL 109
             V +  D+     +A      +K       D +K +  ++  +         NH    L
Sbjct: 27  STVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86

Query: 110 AHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLK 169
            H             V  +                   + V      ++ Q+L  L  + 
Sbjct: 87  DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV----KQISKQLLLGLDYMH 142

Query: 170 -QLGLIHADLKPENIML--VDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEII 226
            + G+IH D+KPEN+++  VD      ++K+ D G+A    +   N+  Q+R YR+PE++
Sbjct: 143 RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI-QTREYRSPEVL 201

Query: 227 LGE 229
           LG 
Sbjct: 202 LGA 204

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (96), Expect = 3e-05
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 34  LPETSIKSKEARKYIFNCLDDIGQVNV-----PTDLEGGELLAEKADRREFIDLLKRMLT 88
           LP   +++ +  +  FN    +  ++        D+   +    K + +E  D L  ML 
Sbjct: 254 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ 313

Query: 89  MDQVERRITPGEALNHAFVT 108
           +D   +R   G  +NH ++ 
Sbjct: 314 LDP-RKRADAGGLVNHPWLK 332

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.5 bits (107), Expect = 9e-07
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 11/68 (16%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQ--- 216
            +L  + K    G++H DL   N+++ +       + +IDF  +  V +      L+   
Sbjct: 111 MILEEVAKFYHRGIVHGDLSQYNVLVSE-----EGIWIIDFPQSVEVGEEGWREILERDV 165

Query: 217 ---SRYYR 221
                Y+ 
Sbjct: 166 RNIITYFS 173

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 38/176 (21%), Positives = 62/176 (35%), Gaps = 16/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT--LAHLV 113
           G V    D + G  +A K   R F  ++       +  R +   + + H  V   L    
Sbjct: 32  GSVCAAFDTKTGLRVAVKKLSRPFQSIIHA----KRTYRELRLLKHMKHENVIGLLDVFT 87

Query: 114 DYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                        +  +                  +       +  Q+L  L  +    +
Sbjct: 88  PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ-----FLIYQILRGLKYIHSADI 142

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           IH DLKP N+     V +   +K++DFG A H        Y+ +R+YRAPEI+L  
Sbjct: 143 IHRDLKPSNLA----VNEDCELKILDFGLARHTDDE-MTGYVATRWYRAPEIMLNW 193

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVD 114
             +DLL++ML +D  ++RIT  +AL HA+    H  D
Sbjct: 276 LAVDLLEKMLVLDS-DKRITAAQALAHAYFAQYHDPD 311

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 10/76 (13%)

Query: 160 QVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG------SASHVSKAVCNT 213
             +  +    +  + H DLK +NI++    ++     + D G      SA+       N 
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLGLAVRHDSATDTIDIAPNH 171

Query: 214 YLQSRYYRAPEIILGE 229
            + ++ Y APE++   
Sbjct: 172 RVGTKRYMAPEVLDDS 187

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
            +V    ++   E +  K  +      +KR       E +I          +    L D 
Sbjct: 49  SEVFEAINITNNEKVVVKILKPVKKKKIKR-------EIKIL-ENLRGGPNII--TLADI 98

Query: 116 AHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIH 175
                 +    + E    + +           +           ++L AL     +G++H
Sbjct: 99  VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIR------FYMYEILKALDYCHSMGIMH 152

Query: 176 ADLKPENIMLVDPVRQPYRVKVIDFGSASHVS-KAVCNTYLQSRYYRAPEIILG 228
            D+KP N+M+     +  ++++ID+G A         N  + SRY++ PE+++ 
Sbjct: 153 RDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 203

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
           E +D L ++L  D  + R+T  EA+ H +
Sbjct: 294 EALDFLDKLLRYDH-QSRLTAREAMEHPY 321

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 21/172 (12%)

Query: 63  DLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVK 122
             +  + +A K  + E  D   +    D++       + L++ ++    ++      +  
Sbjct: 30  MKKVVKTVAVKILKNEANDPALK----DELLAEANVMQQLDNPYIV--RMIGICEAESWM 83

Query: 123 ASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPEN 182
             ++M E+   ++Y           ++       +  QV   +  L++   +H DL   N
Sbjct: 84  LVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEESNFVHRDLAARN 137

Query: 183 IMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR-----YYRAPEIILGE 229
           ++LV      +  K+ DFG +  +         Q+       + APE I   
Sbjct: 138 VLLVT----QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 3e-06
 Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 17/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT--LAHLV 113
           G V    D      +A K   R F +         +  R +   + +NH  +   L    
Sbjct: 31  GIVCAAYDAVLDRNVAIKKLSRPFQNQTHA----KRAYRELVLMKCVNHKNIISLLNVFT 86

Query: 114 DYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                   +    +ME+   +            ++        +  Q+L  +  L   G+
Sbjct: 87  PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS------YLLYQMLCGIKHLHSAGI 140

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNT-YLQSRYYRAPEIILG 228
           IH DLKP NI+    V+    +K++DFG A     +   T Y+ +RYYRAPE+ILG
Sbjct: 141 IHRDLKPSNIV----VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 9e-06
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 60  VPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAH 111
            P  L   +    K    +  DLL +ML +D   +RI+  +AL H ++ + +
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDP-AKRISVDDALQHPYINVWY 318

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAV--CNTYLQ 216
           LQ+L  +       ++H DLKP+N+++     +   +K+ DFG A      V      + 
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVRKYTHEIV 162

Query: 217 SRYYRAPEIILGE 229
           + +YRAP++++G 
Sbjct: 163 TLWYRAPDVLMGS 175

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.6 bits (86), Expect = 7e-04
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAF 106
             IDLL +ML +D   +RIT  +AL HA+
Sbjct: 256 SGIDLLSKMLKLDP-NQRITAKQALEHAY 283

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 8e-06
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCN 212
           ++  Q+   +  +++   IH DL+  NI++ D        K+ DFG A  +         
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSD----TLSCKIADFGLARLIEDNEYTARE 168

Query: 213 TYLQSRYYRAPEIILGE 229
                  + APE I   
Sbjct: 169 GAKFPIKWTAPEAINYG 185

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
           +    V   +  L Q   IH DL   NI++ +     Y  K+ DFG +      V  T  
Sbjct: 131 HFAADVARGMDYLSQKQFIHRDLAARNILVGE----NYVAKIADFGLSRGQEVYVKKTMG 186

Query: 216 Q-SRYYRAPEIILGE 229
           +    + A E +   
Sbjct: 187 RLPVRWMAIESLNYS 201

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCN 212
           ++  Q+ + +  ++++  +H DL+  NI++ +        KV DFG A  +         
Sbjct: 117 DMAAQIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYTARQ 172

Query: 213 TYLQSRYYRAPEIILGE 229
                  + APE  L  
Sbjct: 173 GAKFPIKWTAPEAALYG 189

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            +  Q+ +A+  L++   IH DL   N ++     + + VKV DFG +  ++      + 
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTYTAHA 174

Query: 216 QSR---YYRAPEIILGE 229
            ++    + APE +   
Sbjct: 175 GAKFPIKWTAPESLAYN 191

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 16/154 (10%)

Query: 81  DLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGAT 140
           D+L +   MD   R +    +L+H  +    L        +K   ++  +          
Sbjct: 47  DVLSQPEAMDDFIREVNAMHSLDHRNLI--RLYGVVLTPPMKMVTELAPLGSLLDRLRKH 104

Query: 141 APPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF 200
                   L         +QV   +  L+    IH DL   N++L         VK+ DF
Sbjct: 105 QGHFLLGTLS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLA----TRDLVKIGDF 155

Query: 201 GSASHVSKAVCNTYLQSR-----YYRAPEIILGE 229
           G    + +   +  +Q        + APE +   
Sbjct: 156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 40/176 (22%), Positives = 62/176 (35%), Gaps = 16/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVT--LAHLV 113
           G V    D   G  +A K   R F   L       +  R +   + + H  V   L    
Sbjct: 32  GAVCSAVDGRTGAKVAIKKLYRPFQSELFA----KRAYRELRLLKHMRHENVIGLLDVFT 87

Query: 114 DYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGL 173
                ++      +M                    +       +  Q+L  L  +   G+
Sbjct: 88  PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ-----FLVYQMLKGLRYIHAAGI 142

Query: 174 IHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILGE 229
           IH DLKP N+     V +   +K++DFG A          Y+ +R+YRAPE+IL  
Sbjct: 143 IHRDLKPGNLA----VNEDCELKILDFGLARQADSE-MTGYVVTRWYRAPEVILNW 193

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)

Query: 78  EFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
             ++LL++ML +D  E+R+T GEAL H +  
Sbjct: 276 LAVNLLEKMLVLDA-EQRVTAGEALAHPYFE 305

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 16/176 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
            +V +  D    +L+A K   ++ ++  +  +   + E  +     + H  +    L D 
Sbjct: 23  SEVILAEDKRTQKLVAIKCIAKKALEGKEGSM---ENEIAVL--HKIKHPNI--VALDDI 75

Query: 116 AHCNNVKASV-QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLI 174
                    + Q++                            +  QVL A+  L  LG++
Sbjct: 76  YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------RLIFQVLDAVKYLHDLGIV 129

Query: 175 HADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILGE 229
           H DLKPEN++    + +  ++ + DFG +       V +T   +  Y APE++  +
Sbjct: 130 HRDLKPENLLYYS-LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 184

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 77  REFIDLLKRMLTMDQVERRITPGEALNHAFVT 108
               D ++ ++  D  E+R T  +AL H ++ 
Sbjct: 238 DSAKDFIRHLMEKD-PEKRFTCEQALQHPWIA 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 56  GQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDY 115
            +V++  DL     +A K  R    DL +      +  R      ALNH  +    + D 
Sbjct: 21  SEVHLARDLRLHRDVAVKVLRA---DLARDPSFYLRFRREAQNAAALNHPAI--VAVYDT 75

Query: 116 AHCNNVKASV-----QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ 170
                    +     + ++            P  P + +       V      AL    Q
Sbjct: 76  GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI------EVIADACQALNFSHQ 129

Query: 171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFG-SASHVSKAVCNTYLQSRYYRAPEIILGE 229
            G+IH D+KP NIM+            I    + S  S       + +  Y +PE   G+
Sbjct: 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 189

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCN 212
            + L V   +  L++  +IH DL   N ++     +   +KV DFG    V         
Sbjct: 105 GMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQYTSST 160

Query: 213 TYLQSRYYRAPEIILGE 229
                  + +PE+    
Sbjct: 161 GTKFPVKWASPEVFSFS 177

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 22/131 (16%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 102 LNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQV 161
            +H  +    L+     N V   +++  +     +            L+         Q+
Sbjct: 65  FDHPHI--VKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-----LYAYQL 117

Query: 162 LTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQSR 218
            TAL  L+    +H D+   N+++         VK+ DFG + ++  +     +      
Sbjct: 118 STALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173

Query: 219 YYRAPEIILGE 229
            + APE I   
Sbjct: 174 KWMAPESINFR 184

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            +   V  A+  L+    +H DL   N ++         VKV DFG + +V      + +
Sbjct: 104 EMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDEYTSSV 159

Query: 216 QSR---YYRAPEIILGE 229
            S+    +  PE+++  
Sbjct: 160 GSKFPVRWSPPEVLMYS 176

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (93), Expect = 9e-05
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 11/81 (13%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            +   +   +  L  +  +H DL   NI++          KV DFG +  +     +   
Sbjct: 132 GMLRGIAAGMKYLADMNYVHRDLAARNILVNS----NLVCKVSDFGLSRFLEDDTSDPTY 187

Query: 216 QSR-------YYRAPEIILGE 229
            S         + APE I   
Sbjct: 188 TSALGGKIPIRWTAPEAIQYR 208

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 62  TDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV 121
           +  + G+L A K  ++  I    +     + ER++   E +  +   +     +     +
Sbjct: 47  SGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL--EHIRQSPFLVTLHYAFQTETKL 104

Query: 122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPE 181
              +  +       +          +V +         +++ AL  L +LG+I+ D+K E
Sbjct: 105 HLILDYINGGELFTHLSQRERFTEHEVQIYV------GEIVLALEHLHKLGIIYRDIKLE 158

Query: 182 NIMLVDPVRQPYRVKVIDFGSASHVSKA---VCNTYLQSRYYRAPEIILG 228
           NI+L         V + DFG +             +  +  Y AP+I+ G
Sbjct: 159 NILL----DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 204

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK----AVC 211
            +  ++   +  L     +H DL   N M+ +     + VK+ DFG    + +       
Sbjct: 137 QMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETDYYRKG 192

Query: 212 NTYLQSRYYRAPEIILGE 229
              L    + +PE +   
Sbjct: 193 GKGLLPVRWMSPESLKDG 210

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK-----AV 210
            +  QV   +  L++   +H DL   N++LV+     +  K+ DFG +  +         
Sbjct: 113 ELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN----RHYAKISDFGLSKALGADDSYYTA 168

Query: 211 CNTYLQSRYYRAPEIILGE 229
            +       + APE I   
Sbjct: 169 RSAGKWPLKWYAPECINFR 187

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 15/74 (20%), Positives = 23/74 (31%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
           + + QV   +  L     IH DL   NI+L            +     +  +  V     
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208

Query: 216 QSRYYRAPEIILGE 229
               + APE I   
Sbjct: 209 LPVKWMAPESIFNC 222

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 31/163 (19%), Positives = 47/163 (28%), Gaps = 10/163 (6%)

Query: 71  AEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV 130
           A  ++ R  +  LK ++ +      +    A       L  +V    C     S  +   
Sbjct: 55  ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSK 112

Query: 131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR 190
                             L        + QV   +  L     IH DL   NI+L     
Sbjct: 113 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----S 168

Query: 191 QPYRVKVIDFGSASHVSK----AVCNTYLQSRYYRAPEIILGE 229
           +   VK+ DFG A  + K               + APE I   
Sbjct: 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 211

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 9/79 (11%)

Query: 156 NVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYL 215
            +   +   +  L  +  +H DL   NI++          KV DFG +  +      TY 
Sbjct: 114 GMLRGIAAGMKYLANMNYVHRDLAARNILVNS----NLVCKVSDFGLSRVLEDDPEATYT 169

Query: 216 QSR-----YYRAPEIILGE 229
            S       + APE I   
Sbjct: 170 TSGGKIPIRWTAPEAISYR 188

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 159 LQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCNTYLQSR 218
           LQV   +  L     +H DL   N ML     + + VKV DFG A  +     ++     
Sbjct: 137 LQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKT 192

Query: 219 ------YYRAPEIILGE 229
                  + A E +  +
Sbjct: 193 GAKLPVKWMALESLQTQ 209

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.98
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.98
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.98
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.9
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.21
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.04
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.81
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.45
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.07
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.65

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=276.16  Aligned_cols=160  Identities=20%  Similarity=0.277  Sum_probs=133.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||+++....     ....+.+.+|+.++++++||||+  ++++++.  +....|+||||++
T Consensus        16 G~fg~V~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv--~~~~~~~--~~~~~~ivmEy~~   86 (271)
T d1nvra_          16 GAYGEVQLAVNRVTEEAVAVKIVDMKRA-----VDCPENIKKEICINKMLNHENVV--KFYGHRR--EGNIQYLFLEYCS   86 (271)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECC------------CHHHHHHHHHTCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEehhhc-----chHHHHHHHHHHHHHhCCCCCEe--eEeeeec--cCceeEEEEeccC
Confidence            8999999999999999999999875422     12234678999999999999998  4555554  3456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..   ...+++.+++.++.|+++||+|||++||+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus        87 gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl----~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          87 GGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             TEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----CTTCCEEECCCTTCEECEETTEE
T ss_pred             CCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE----CCCCCEEEccchhheeeccCCcc
Confidence            9998777665   4579999999999999999999999999999999999999    77789999999999987432   


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|||||++.+
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~  179 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKR  179 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHC
T ss_pred             ccccceeeCcCccCHhHhcC
Confidence             2356789999999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=274.24  Aligned_cols=163  Identities=21%  Similarity=0.273  Sum_probs=139.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|++.+....   .....+.+.+|+.+++.++||||+  .+++++.  +....|+||||++
T Consensus        17 G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv--~~~~~~~--~~~~~~ivmEy~~   89 (263)
T d2j4za1          17 GKFGNVYLAREKQSKFILALKVLFKAQLE---KAGVEHQLRREVEIQSHLRHPNIL--RLYGYFH--DATRVYLILEYAP   89 (263)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CCCcEEEEEEECCCCcEEEEEEEchHHcc---ChHHHHHHHHHHHHHHhcCCCCCC--eEEEEEE--ECCEEEEEEeecC
Confidence            99999999999999999999998875432   233455778999999999999998  4555554  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|+|..++..   ...+++.+++.++.||++||+|||++||+||||||+|||+    +.++.+||+|||+|+........
T Consensus        90 ~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          90 LGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----GSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEECCCCSCSCCCCCCCE
T ss_pred             CCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee----cCCCCEeecccceeeecCCCccc
Confidence            9997766554   3468999999999999999999999999999999999999    88889999999999888776667


Q ss_pred             ceeecccCCCCccccCC
Q psy11822        213 TYLQSRYYRAPEIILGE  229 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~~  229 (229)
                      ..+||+.|||||++.++
T Consensus       163 ~~~Gt~~Y~APE~~~~~  179 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGR  179 (263)
T ss_dssp             ETTEEGGGCCHHHHTTC
T ss_pred             ccCCCCcccCHHHHcCC
Confidence            78999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-42  Score=274.33  Aligned_cols=173  Identities=18%  Similarity=0.148  Sum_probs=140.1

Q ss_pred             cccceeecc---cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc-
Q psy11822         43 EARKYIFNC---LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC-  118 (229)
Q Consensus        43 ~~~~~~~~~---~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~-  118 (229)
                      .+++|.+..   .|+||+||+|++..+++.||+|.+......    ....+.+.+|+++|++++||||+  ++++++.. 
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~----~~~~~~~~~E~~il~~l~HpnIv--~~~~~~~~~   80 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT----KSERQRFKEEAEMLKGLQHPNIV--RFYDSWEST   80 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEEEE
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC----HHHHHHHHHHHHHHHhCCCCCee--eEEEEEeec
Confidence            445556543   299999999999999999999998764322    11234678999999999999998  45554432 


Q ss_pred             -ccccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCC--CccccCCCCCeeeeCCCC-CCcc
Q psy11822        119 -NNVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLG--LIHADLKPENIMLVDPVR-QPYR  194 (229)
Q Consensus       119 -~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~--iiHrDlkp~Nil~~~~~~-~~~~  194 (229)
                       .....+|+||||+++|+|..++..   ...+++.+++.++.||++||+|||+++  |+||||||+|||+    + .++.
T Consensus        81 ~~~~~~~~ivmE~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl----~~~~~~  153 (270)
T d1t4ha_          81 VKGKKCIVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----TGPTGS  153 (270)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEE----SSTTSC
T ss_pred             cccCCEEEEEEeCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhcee----eCCCCC
Confidence             234567999999999998776654   346888899999999999999999998  9999999999999    4 3579


Q ss_pred             EEEeecCcceecCcccccceeecccCCCCccccC
Q psy11822        195 VKVIDFGSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       195 ~kl~DFg~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      +||+|||+|+..........+||+.|||||++.+
T Consensus       154 ~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~  187 (270)
T d1t4ha_         154 VKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE  187 (270)
T ss_dssp             EEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT
T ss_pred             EEEeecCcceeccCCccCCcccCccccCHHHhCC
Confidence            9999999998776666667899999999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-42  Score=275.70  Aligned_cols=159  Identities=20%  Similarity=0.230  Sum_probs=135.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++...      ....+.+.+|+.+++.++||||+  .+++++..  ...+|+||||++
T Consensus        31 G~fg~Vy~a~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~il~~l~HpnIv--~~~~~~~~--~~~~~ivmEy~~  100 (293)
T d1yhwa1          31 GASGTVYTAMDVATGQEVAIRQMNLQQ------QPKKELIINEILVMRENKNPNIV--NYLDSYLV--GDELWVVMEYLA  100 (293)
T ss_dssp             SSSCEEEEEEBTTTCCEEEEEEEEGGG------CSCHHHHHHHHHHHHHCCCTTBC--CEEEEEEE--TTEEEEEEECCT
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEeccc------ChHHHHHHHHHHHHHhCCCCCEe--eEeEEEEE--CCEEEEEEEecC
Confidence            999999999999999999999987531      22345679999999999999998  45555543  345799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..+...    ..+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.+...  .
T Consensus       101 gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1         101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE----CCCCcEeeccchhheeecccccc
Confidence            9998776554    468999999999999999999999999999999999999    77789999999999987543  3


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....+||+.|||||++.++
T Consensus       173 ~~~~~gt~~Y~aPE~~~~~  191 (293)
T d1yhwa1         173 RSTMVGTPYWMAPEVVTRK  191 (293)
T ss_dssp             BCCCCSCGGGCCHHHHSSS
T ss_pred             ccccccCCCccChhhhcCC
Confidence            4567899999999999763

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-42  Score=280.93  Aligned_cols=161  Identities=20%  Similarity=0.294  Sum_probs=134.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++...     .....+++.+|+.+|+.++||||+  ++++++.  +...+|+||||++
T Consensus        17 G~fg~V~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~~~~Ei~il~~l~HpnIv--~l~~~~~--~~~~~~iVmEy~~   87 (322)
T d1s9ja_          17 GNGGVVFKVSHKPSGLVMARKLIHLEI-----KPAIRNQIIRELQVLHECNSPYIV--GFYGAFY--SDGEISICMEHMD   87 (322)
T ss_dssp             CSSCCEEEEEETTTTEEEEEEEEECCC-----CTTHHHHHHHHGGGGGGCCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEChhh-----CHHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEEcCC
Confidence            999999999999999999999987531     122234678999999999999998  5555554  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      +|+|..++.+   .+.+++.+++.++.|++.||.|||+ +||+||||||+|||+    +.++.+||+|||+|+.......
T Consensus        88 gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl----~~~~~vkl~DFGla~~~~~~~~  160 (322)
T d1s9ja_          88 GGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----NSRGEIKLCDFGVSGQLIDSMA  160 (322)
T ss_dssp             TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----CTTCCEEECCCCCCHHHHHHTC
T ss_pred             CCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE----CCCCCEEEeeCCCccccCCCcc
Confidence            9998777654   3468999999999999999999997 599999999999999    8888999999999998766655


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      .+.+||+.|||||++.|.
T Consensus       161 ~~~~GT~~Y~APEvl~~~  178 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGT  178 (322)
T ss_dssp             ---CCSSCCCCHHHHHCS
T ss_pred             ccccCCccccCchHHcCC
Confidence            678999999999999763

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-41  Score=270.63  Aligned_cols=163  Identities=21%  Similarity=0.281  Sum_probs=134.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++++....   .....+.+.+|+.++++++||||+  .+++++.  +...+|+||||++
T Consensus        19 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~E~~il~~l~HpnIv--~l~~~~~--~~~~~~ivmEy~~   91 (288)
T d1uu3a_          19 GSFSTVVLARELATSREYAIKILEKRHII---KENKVPYVTRERDVMSRLDHPFFV--KLYFTFQ--DDEKLYFGLSYAK   91 (288)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHHCCSTTBC--CEEEEEE--CSSEEEEEECCCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEehHHcc---CHHHHHHHHHHHHHHHHcCCCCee--EEEEEEE--ECCEEEEEEEccC
Confidence            99999999999999999999999875332   234456789999999999999998  4555544  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..++..   .+.+++.+++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||+|+.+...   
T Consensus        92 gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll----~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          92 NGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL----NEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECC-----
T ss_pred             CCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc----CCCceEEecccccceecccCCcc
Confidence            9997666554   3568999999999999999999999999999999999999    88889999999999987543   


Q ss_pred             -cccceeecccCCCCccccCC
Q psy11822        210 -VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~~  229 (229)
                       .....+||+.|||||++.++
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~  185 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEK  185 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTC
T ss_pred             cccccccCCccccCceeeccC
Confidence             33457899999999998763

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=271.79  Aligned_cols=163  Identities=20%  Similarity=0.216  Sum_probs=138.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++++....   .....+++.+|+.+|+.++||||+  .+++.+.  +...+|+||||++
T Consensus        16 G~fg~V~~~~~~~~~~~~AiK~i~k~~~~---~~~~~~~~~~E~~il~~l~hp~Iv--~l~~~~~--~~~~~~iv~ey~~   88 (337)
T d1o6la_          16 GTFGKVILVREKATGRYYAMKILRKEVII---AKDEVAHTVTESRVLQNTRHPFLT--ALKYAFQ--THDRLCFVMEYAN   88 (337)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHSCCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEchhhcc---CHHHHHHHHHHHHHHHhCCCCCEE--EEEeeec--cccccccceeccC
Confidence            99999999999999999999999875432   233456778999999999999998  4444444  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..++..   .+.+++..++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+.....  .
T Consensus        89 gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl----~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          89 GGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML----DKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             TCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCSCCTTCC
T ss_pred             CCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe----cCCCCEEEeecccccccccCCcc
Confidence            9997666555   4568889999999999999999999999999999999999    88899999999999876442  4


Q ss_pred             ccceeecccCCCCccccCC
Q psy11822        211 CNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~~  229 (229)
                      ....+||+.|||||++.++
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~  180 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSS
T ss_pred             cccceeCHHHhhhhhccCC
Confidence            4568999999999999764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4e-41  Score=271.95  Aligned_cols=164  Identities=21%  Similarity=0.281  Sum_probs=120.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||++.+.....     ....+.+|+.+|+.++||||+  .+++++.  +...+|+|||||+
T Consensus        20 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-----~~~~~~~Ei~il~~l~HpnIv--~l~~~~~--~~~~~~lvmE~~~   90 (307)
T d1a06a_          20 GAFSEVILAEDKRTQKLVAIKCIAKKALEG-----KEGSMENEIAVLHKIKHPNIV--ALDDIYE--SGGHLYLIMQLVS   90 (307)
T ss_dssp             GGGGGEEEEEETTTCCEEEEEEEEC---------------CHHHHHHHTCCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEchHHhhh-----HHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEeccC
Confidence            999999999999999999999987653321     224578999999999999998  4555554  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|..++..   .+.+++.++..++.||+.||.|||++||+||||||+|||+... +.++.+||+|||+|+..... ..
T Consensus        91 gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~-~~~~~vkl~DFG~a~~~~~~~~~  166 (307)
T d1a06a_          91 GGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSKMEDPGSVL  166 (307)
T ss_dssp             SCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-STTCCEEECCC------------
T ss_pred             CCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc-CCCceEEEeccceeEEccCCCee
Confidence            9997766654   3569999999999999999999999999999999999999554 44679999999999877554 34


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ...+||+.|||||++.++
T Consensus       167 ~~~~GT~~y~APE~~~~~  184 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQK  184 (307)
T ss_dssp             ------CTTSCHHHHTTC
T ss_pred             eeeeeCccccCcHHHcCC
Confidence            567899999999998763

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-40  Score=269.38  Aligned_cols=162  Identities=22%  Similarity=0.287  Sum_probs=137.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||++++....   .....+.+.+|+.+++.++||||+  ++++++.  +...+|+||||++
T Consensus        15 G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~---~~~~~~~~~~E~~il~~l~HpnIv--~~~~~~~--~~~~~~ivmE~~~   87 (316)
T d1fota_          15 GSFGRVHLIRSRHNGRYYAMKVLKKEIVV---RLKQVEHTNDERLMLSIVTHPFII--RMWGTFQ--DAQQIFMIMDYIE   87 (316)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHSCCBTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEchHHcc---CHHHHHHHHHHHHHHHhccCcChh--heeeeEe--eCCeeeeEeeecC
Confidence            99999999999999999999999875432   234456789999999999999998  4555544  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|++..+...   ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+...... .
T Consensus        88 gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl----~~~g~vkL~DFG~a~~~~~~~-~  159 (316)
T d1fota_          88 GGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL----DKNGHIKITDFGFAKYVPDVT-Y  159 (316)
T ss_dssp             SCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTSCEEECCCSSCEECSSCB-C
T ss_pred             Cccccccccc---cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE----cCCCCEEEecCccceEecccc-c
Confidence            9997666554   3457778888999999999999999999999999999999    888899999999999876543 5


Q ss_pred             ceeecccCCCCccccCC
Q psy11822        213 TYLQSRYYRAPEIILGE  229 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~~  229 (229)
                      ..+||+.|||||++.++
T Consensus       160 ~~~Gt~~Y~APE~l~~~  176 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTK  176 (316)
T ss_dssp             CCCSCTTTCCHHHHTTC
T ss_pred             cccCcccccCHHHHcCC
Confidence            67999999999999763

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-41  Score=274.19  Aligned_cols=160  Identities=26%  Similarity=0.280  Sum_probs=132.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++......   ....+.+.+|+.+|++++||||+  ++++++.  +...+|+|||||+
T Consensus        26 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv--~~~~~~~--~~~~~~iv~E~~~   98 (309)
T d1u5ra_          26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQS---NEKWQDIIKEVRFLQKLRHPNTI--QYRGCYL--REHTAWLVMEYCL   98 (309)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEEEECCSSCH---HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEchhhccC---HHHHHHHHHHHHHHHHCCCCCEe--eEEEEEE--ECCEEEEEEEecC
Confidence            999999999999999999999986532111   22344678999999999999998  4555544  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|++..+...   ...+++.+++.++.||++||.|||++||+||||||+|||+    +.++.+||+|||+|+.....  .
T Consensus        99 ~g~l~~~~~~---~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl----~~~~~~Kl~DFG~a~~~~~~--~  169 (309)
T d1u5ra_          99 GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----SEPGLVKLGDFGSASIMAPA--N  169 (309)
T ss_dssp             EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE----ETTTEEEECCCTTCBSSSSB--C
T ss_pred             CCchHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE----CCCCCEEEeecccccccCCC--C
Confidence            9987655443   3468999999999999999999999999999999999999    77789999999999876543  4


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ..+||+.|||||++.+
T Consensus       170 ~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         170 SFVGTPYWMAPEVILA  185 (309)
T ss_dssp             CCCSCGGGCCHHHHTT
T ss_pred             ccccCccccCHHHHhc
Confidence            5789999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-41  Score=270.41  Aligned_cols=160  Identities=21%  Similarity=0.253  Sum_probs=134.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||+|+++..      .....+.+.+|+++|++++||||+  ++++++.  +...+++||||++
T Consensus        23 G~fg~Vy~~~~~~~~~~vAvK~i~~~------~~~~~~~~~~E~~il~~l~HpnIv--~l~~~~~--~~~~~~lvmEy~~   92 (288)
T d2jfla1          23 GAFGKVYKAQNKETSVLAAAKVIDTK------SEEELEDYMVEIDILASCDHPNIV--KLLDAFY--YENNLWILIEFCA   92 (288)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECS------SSGGGGGTHHHHHHHHHCCCTTBC--CEEEEEE--ETTEEEEEEECCT
T ss_pred             CCCcEEEEEEECCCCeEEEEEEECcC------CHHHHHHHHHHHHHHHhCCCCCCC--eEEEEEe--eCCeEEEEEecCC
Confidence            99999999999999999999998753      133456789999999999999998  4555544  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      +|+|..++...  ...+++.+++.++.||++||.|||++||+||||||+|||+    +.++.+||+|||+|+.....  .
T Consensus        93 ~g~L~~~~~~~--~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll----~~~~~~Kl~DFG~a~~~~~~~~~  166 (288)
T d2jfla1          93 GGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF----TLDGDIKLADFGVSAKNTRTIQR  166 (288)
T ss_dssp             TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECHHHHHH
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE----CCCCCEEEEechhhhccCCCccc
Confidence            99977664321  2358999999999999999999999999999999999999    88889999999999876543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      ....+||+.|||||++.+
T Consensus       167 ~~~~~Gt~~y~APE~l~~  184 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMC  184 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTT
T ss_pred             ccccccccccCCHHHHhh
Confidence            456899999999999853

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=270.46  Aligned_cols=166  Identities=19%  Similarity=0.204  Sum_probs=123.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||+|+++......    ...+.+.+|++++++++||||+  ++++++...+...+|+||||++
T Consensus        15 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~----~~~~~~~~E~~il~~l~HpnIv--~~~~~~~~~~~~~~~ivmEy~~   88 (269)
T d2java1          15 GSYGRCQKIRRKSDGKILVWKELDYGSMTE----AEKQMLVSEVNLLRELKHPNIV--RYYDRIIDRTNTTLYIVMEYCE   88 (269)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEECCTTSCH----HHHHHHHHHHHHTTSCCCTTBC--CEEEEEEC----CEEEEEECCT
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEChhhCCH----HHHHHHHHHHHHHHHCCCCCEe--eEEEEEEeCCCCEEEEEEecCC
Confidence            999999999999999999999987543221    1234678999999999999998  4555544444456799999999


Q ss_pred             CCCCCccCCCC-CCCCccccCCccchHHHHHHHHHHHHHCC-----CccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        133 RSQYTGATAPP-PPAQVLVPAPPGNVTLQVLTALLKLKQLG-----LIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       133 ~~~l~~~~~~~-~~~~~l~~~~~~~i~~qi~~gl~~LH~~~-----iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      +|+|..++... .....+++.+++.++.|++.||.|||+++     |+||||||+|||+    +.++.+||+|||+|+.+
T Consensus        89 ~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll----~~~~~vkl~DFG~a~~~  164 (269)
T d2java1          89 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARIL  164 (269)
T ss_dssp             TEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE----CTTSCEEECCHHHHHHC
T ss_pred             CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc----CCCCcEEEeeccceeec
Confidence            99977665421 11245899999999999999999999876     9999999999999    88889999999999887


Q ss_pred             Ccc--cccceeecccCCCCccccC
Q psy11822        207 SKA--VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~--~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...  .....+||+.|||||++.+
T Consensus       165 ~~~~~~~~~~~gt~~Y~APE~l~~  188 (269)
T d2java1         165 NHDTSFAKAFVGTPYYMSPEQMNR  188 (269)
T ss_dssp             -----------CCCSCCCHHHHTT
T ss_pred             ccCCCccccCCCCcccCCHHHHcC
Confidence            553  3356899999999999875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-40  Score=264.90  Aligned_cols=160  Identities=16%  Similarity=0.124  Sum_probs=132.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||+++..       ....+++.+|+++|++++||||+  .+++++.  +....++||||++
T Consensus        28 G~fg~Vy~a~~~~~~~~vAvK~i~~~-------~~~~~~~~~E~~il~~l~HpnIv--~~~~~~~--~~~~~~iv~E~~~   96 (287)
T d1opja_          28 GQYGEVYEGVWKKYSLTVAVKTLKED-------TMEVEEFLKEAAVMKEIKHPNLV--QLLGVCT--REPPFYIITEFMT   96 (287)
T ss_dssp             TTTSSEEEEEEGGGTEEEEEEECCTT-------CSCHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEEEECCT
T ss_pred             CCCeEEEEEEECCCCeEEEEEEECCc-------cchHHHHHHHHHHHHhCCCCCEe--cCCccEe--eCCeeEEEeeccc
Confidence            99999999999999999999998753       22345689999999999999998  4555443  4456799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|++..++.... ...+++..+..++.||++||.|||++||+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus        97 ~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFG~a~~~~~~~~~  171 (287)
T d1opja_          97 YGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----GENHLVKVADFGLSRLMTGDTYT  171 (287)
T ss_dssp             TCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCCTTTCCSSSSE
T ss_pred             CcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE----CCCCcEEEccccceeecCCCCce
Confidence            999666543211 2458888889999999999999999999999999999999    88899999999999877543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       172 ~~~~~~g~~~y~aPE~~~~  190 (287)
T d1opja_         172 AHAGAKFPIKWTAPESLAY  190 (287)
T ss_dssp             EETTEEECGGGCCHHHHHH
T ss_pred             eeccccccccccChHHHcC
Confidence            2345678999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=267.77  Aligned_cols=170  Identities=24%  Similarity=0.308  Sum_probs=138.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++++............+.+.+|+.+|++++||||+  ++++++.  +...+|+|||||+
T Consensus        21 G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv--~~~~~~~--~~~~~~iv~E~~~   96 (293)
T d1jksa_          21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI--TLHEVYE--NKTDVILILELVA   96 (293)
T ss_dssp             CSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEEcCC
Confidence            99999999999999999999998753222112222355789999999999999998  4555554  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|..++..   .+.+++.+++.++.|++.||+|||+++|+||||||+|||+.........+||+|||+|...... ..
T Consensus        97 gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~  173 (293)
T d1jksa_          97 GGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF  173 (293)
T ss_dssp             SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBC
T ss_pred             Cccccchhcc---ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccc
Confidence            9998776654   3469999999999999999999999999999999999999544333447999999999988654 44


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ....||+.|+|||++.++
T Consensus       174 ~~~~~t~~y~APE~~~~~  191 (293)
T d1jksa_         174 KNIFGTPEFVAPEIVNYE  191 (293)
T ss_dssp             SCCCCCGGGCCHHHHTTC
T ss_pred             cccCCCCcccCHHHHcCC
Confidence            567899999999998763

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7e-40  Score=270.40  Aligned_cols=165  Identities=17%  Similarity=0.182  Sum_probs=135.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++.+................+|+.+++.++||||+  .+++++.  +...+|+||||++
T Consensus        15 G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv--~l~~~~~--~~~~~~ivmE~~~   90 (364)
T d1omwa3          15 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV--CMSYAFH--TPDKLSFILDLMN   90 (364)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBC--CEEEEEE--CSSEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEE--EEEEEEE--ECCEEEEEEEecC
Confidence            99999999999999999999998775443222222222234557778888999998  4454444  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|+|..++..   ...+++.+++.++.||+.||.|||++||+||||||+|||+    +..+.+||+|||+|+.+......
T Consensus        91 gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl----~~~g~iKl~DFGla~~~~~~~~~  163 (364)
T d1omwa3          91 GGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKKKPH  163 (364)
T ss_dssp             SCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CSSSCEEECCCTTCEECSSSCCC
T ss_pred             CCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE----cCCCcEEEeeeceeeecCCCccc
Confidence            9998776654   3468888999999999999999999999999999999999    88889999999999988777667


Q ss_pred             ceeecccCCCCccccC
Q psy11822        213 TYLQSRYYRAPEIILG  228 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~  228 (229)
                      ..+||+.|||||++.+
T Consensus       164 ~~~GT~~y~APE~~~~  179 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQK  179 (364)
T ss_dssp             SCCSCGGGCCHHHHST
T ss_pred             ccccccccchhHHhhc
Confidence            7899999999999863

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.9e-40  Score=268.46  Aligned_cols=162  Identities=23%  Similarity=0.237  Sum_probs=137.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++++....   .....+.+.+|+++|+.++||||+  ++++.+.  .....++||||+.
T Consensus        52 G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv--~~~~~~~--~~~~~~~v~e~~~  124 (350)
T d1rdqe_          52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIEHTLNEKRILQAVNFPFLV--KLEFSFK--DNSNLYMVMEYVA  124 (350)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEHHHHH---HTTCHHHHHHHHHHHTTCCCTTBC--CEEEEEE--CSSEEEEEEECCT
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEchHHcc---CHHHHHHHHHHHHHHHHcCCCcEe--ecccccc--ccccccccccccc
Confidence            99999999999999999999999775332   234456778999999999999997  4444444  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCccccc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCN  212 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~~  212 (229)
                      +|++...+..   .+.+++.+++.++.||+.||.|||++|||||||||+|||+    +.++.+||+|||+|+...... .
T Consensus       125 ~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl----~~~g~ikL~DFG~a~~~~~~~-~  196 (350)
T d1rdqe_         125 GGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRT-W  196 (350)
T ss_dssp             TCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTSCEEECCCTTCEECSSCB-C
T ss_pred             ccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc----CCCCCEEeeeceeeeeccccc-c
Confidence            9997666554   3468999999999999999999999999999999999999    888899999999999876543 5


Q ss_pred             ceeecccCCCCccccCC
Q psy11822        213 TYLQSRYYRAPEIILGE  229 (229)
Q Consensus       213 ~~~gt~~y~aPE~l~~~  229 (229)
                      ..+||+.|||||++.++
T Consensus       197 ~~~Gt~~Y~APE~~~~~  213 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSK  213 (350)
T ss_dssp             CCEECGGGCCHHHHTTC
T ss_pred             cccCccccCCHHHHcCC
Confidence            67999999999999764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1e-39  Score=267.95  Aligned_cols=163  Identities=23%  Similarity=0.294  Sum_probs=134.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||++......      ..+.+.+|+.+|+.++||||+  .+++++.  +...+|+|||||+
T Consensus        37 G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~------~~~~~~~E~~il~~l~HpnIv--~~~~~~~--~~~~~~ivmE~~~  106 (350)
T d1koaa2          37 GAFGVVHRVTERATGNNFAAKFVMTPHES------DKETVRKEIQTMSVLRHPTLV--NLHDAFE--DDNEMVMIYEFMS  106 (350)
T ss_dssp             ETTEEEEEEEETTTTEEEEEEEECCCSHH------HHHHHHHHHHHHHHTCCTTBC--CEEEEEE--ETTEEEEEECCCC
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEcccchh------hHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEEcCC
Confidence            99999999999999999999998764222      234678999999999999998  4555544  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|...+...  ...+++.++..++.||+.||.|||++||+||||||+|||+...  .++.+||+|||+|+.+... ..
T Consensus       107 gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~--~~~~vkL~DFG~a~~~~~~~~~  182 (350)
T d1koaa2         107 GGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK--RSNELKLIDFGLTAHLDPKQSV  182 (350)
T ss_dssp             SCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST--TSCCEEECCCTTCEECCTTSCE
T ss_pred             CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC--CCCeEEEeecchheeccccccc
Confidence            99976655331  3469999999999999999999999999999999999999432  2468999999999987654 44


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ....||+.|||||++.++
T Consensus       183 ~~~~gT~~Y~aPEv~~~~  200 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGK  200 (350)
T ss_dssp             EEECSCTTTCCHHHHHTC
T ss_pred             ceecCcccccCHHHHcCC
Confidence            568999999999998763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.1e-39  Score=266.32  Aligned_cols=163  Identities=23%  Similarity=0.278  Sum_probs=134.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++.....      ....+.+|+.+|++++||||+  .+++++.  +...+|+|||||+
T Consensus        40 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~Ei~il~~l~HpnIv--~~~~~~~--~~~~~~ivmE~~~  109 (352)
T d1koba_          40 GAFGVVHRCVEKATGRVFVAKFINTPYPL------DKYTVKNEISIMNQLHHPKLI--NLHDAFE--DKYEMVLILEFLS  109 (352)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCSHH------HHHHHHHHHHHHTTCCSTTBC--CEEEEEE--CSSEEEEEEECCC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEECCcchh------HHHHHHHHHHHHHhCCCCCCC--cEEEEEE--ECCEEEEEEEcCC
Confidence            99999999999999999999998764322      123568899999999999998  5555554  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|.......  ...+++.+++.++.||+.||.|||++||+||||||+|||+..  ...+.+||+|||+|+.+... ..
T Consensus       110 gg~L~~~~~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~--~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         110 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET--KKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS--TTCCCEEECCCTTCEECCTTSCE
T ss_pred             CChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc--cCCCeEEEeecccceecCCCCce
Confidence            99975543331  335999999999999999999999999999999999999932  14579999999999988664 44


Q ss_pred             cceeecccCCCCccccCC
Q psy11822        212 NTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~~  229 (229)
                      ....||+.|||||++.++
T Consensus       186 ~~~~gt~~y~aPE~~~~~  203 (352)
T d1koba_         186 KVTTATAEFAAPEIVDRE  203 (352)
T ss_dssp             EEECSSGGGCCHHHHTTC
T ss_pred             eeccCcccccCHHHHcCC
Confidence            567999999999998763

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=260.69  Aligned_cols=166  Identities=23%  Similarity=0.259  Sum_probs=132.2

Q ss_pred             ccCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeee
Q psy11822         51 CLDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      +.|+||+||+|++..+|+.||||+++........ ......+.+|+.+++.++||||+  ++++++.  +....|+||||
T Consensus         7 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv--~~~~~~~--~~~~~~ivmE~   81 (299)
T d1ua2a_           7 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK-DGINRTALREIKLLQELSHPNII--GLLDAFG--HKSNISLVFDF   81 (299)
T ss_dssp             EEETTEEEEEEECSSCCSEEEEEEC-------------CTHHHHHHHHHHHCCCTTBC--CEEEEEC--CTTCCEEEEEC
T ss_pred             ccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhh-HHHHHHHHHHHHHHHhCCCCCEe--EEEeeec--cCCceeehhhh
Confidence            4499999999999999999999998764332211 22234678999999999999998  4555554  34568999999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.++++..+...   ...+++.++..++.||+.||+|||++||+||||||+|||+    +..+.+||+|||+|+..... 
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli----~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          82 METDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             CSEEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCCGGGSTTTSCC
T ss_pred             hcchHHhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe----cCCCccccccCccccccCCCc
Confidence            999986666554   3569999999999999999999999999999999999999    88889999999999877553 


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|+|||++.+
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~  174 (299)
T d1ua2a_         155 RAYTHQVVTRWYRAPELLFG  174 (299)
T ss_dssp             CCCCCSCCCCTTCCHHHHTT
T ss_pred             ccccceecChhhccHHHHcc
Confidence             3345789999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-39  Score=257.27  Aligned_cols=165  Identities=24%  Similarity=0.287  Sum_probs=127.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc--cccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN--NVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~--~~~~~~lv~e~  130 (229)
                      |+||.||+|++..+|+.||||++++....   .....+.+.+|+.+++.++||||+.  +++++...  .....|+||||
T Consensus        18 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~~E~~~l~~~~hpniv~--~~~~~~~~~~~~~~~~lvmE~   92 (277)
T d1o6ya_          18 GGMSEVHLARDLRLHRDVAVKVLRADLAR---DPSFYLRFRREAQNAAALNHPAIVA--VYDTGEAETPAGPLPYIVMEY   92 (277)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSTTTT---CHHHHHHHHHHHHHHHTCCCTTBCC--EEEEEEEECSSSEEEEEEEEC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEchhhcc---CHHHHHHHHHHHHHHHhcCCCCCCc--ccceeeeccCCCceEEEEEEC
Confidence            99999999999999999999998753221   1223446789999999999999984  44444322  22347899999


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +++++|......   .+.+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.++|+|||.+...... 
T Consensus        93 ~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll----~~~~~~~l~d~~~~~~~~~~~  165 (277)
T d1o6ya_          93 VDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSG  165 (277)
T ss_dssp             CCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTSCEEECCCTTCEECC---
T ss_pred             CCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc----Cccccceeehhhhhhhhcccc
Confidence            999997766554   3468999999999999999999999999999999999999    77789999999998766432 


Q ss_pred             ----cccceeecccCCCCccccCC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~~  229 (229)
                          .....+||+.|||||++.++
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~  189 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGD  189 (277)
T ss_dssp             -------------TTCCHHHHTTC
T ss_pred             ccccccccccCcccccCHHHHcCC
Confidence                33567899999999998763

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=252.55  Aligned_cols=160  Identities=16%  Similarity=0.161  Sum_probs=121.6

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++. ++..||||+++..       ....+.+.+|++++++++||||+  ++++++.  .....++||||+
T Consensus        15 ~G~fg~Vy~~~~~-~~~~vAvK~i~~~-------~~~~~~~~~E~~~l~~l~HpnIv--~~~g~~~--~~~~~~lv~E~~   82 (263)
T d1sm2a_          15 SGQFGLVHLGYWL-NKDKVAIKTIREG-------AMSEEDFIEEAEVMMKLSHPKLV--QLYGVCL--EQAPICLVFEFM   82 (263)
T ss_dssp             CCSSCCEEEEEET-TTEEEEEEECCSS-------SSCHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEEEEECC
T ss_pred             eCCCeEEEEEEEC-CCCEEEEEEECCC-------cCcHHHHHHHHHHHHhcCCCCcc--cccceec--cCCceEEEEEec
Confidence            4999999999975 5788999998753       22334678999999999999998  5555543  345679999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|+|..++...  ...+++..+..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||+|+.....  
T Consensus        83 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          83 EHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----GENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             TTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE----CGGGCEEECSCC----------
T ss_pred             CCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee----cCCCCeEecccchheeccCCCc
Confidence            999977664432  2357888889999999999999999999999999999999    88899999999999877543  


Q ss_pred             -cccceeecccCCCCccccCC
Q psy11822        210 -VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~~  229 (229)
                       ......||+.|+|||++.++
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~  177 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFS  177 (263)
T ss_dssp             --------CTTSCCHHHHTTC
T ss_pred             eeecceecCcccCChHHhcCC
Confidence             22346889999999998763

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=257.11  Aligned_cols=159  Identities=19%  Similarity=0.125  Sum_probs=124.1

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++.   ..||||+++....+    ....+.+.+|+.++++++||||+.  ++++..   ...+++||||+
T Consensus        18 ~G~fg~Vy~~~~~---~~vAvK~~~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~--~~~~~~---~~~~~lv~Ey~   85 (276)
T d1uwha_          18 SGSFGTVYKGKWH---GDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNILL--FMGYST---APQLAIVTQWC   85 (276)
T ss_dssp             ECSSCEEEEEESS---SEEEEEECCCSSCC----TTHHHHHHHHHHHHTTCCCTTBCC--EEEEEC---SSSCEEEEECC
T ss_pred             eCCCcEEEEEEEC---CEEEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEee--eeEEEe---ccEEEEEEecC
Confidence            3999999999864   35999998653211    223457789999999999999984  444432   23579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|+|..++...  ...+++.++..++.||++||+|||+++||||||||+|||+    +.++.+||+|||+|+.....  
T Consensus        86 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl----~~~~~~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          86 EGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             CEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----ETTSSEEECCCCCSCC------
T ss_pred             CCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE----cCCCCEEEccccceeeccccCC
Confidence            999977665431  2358888999999999999999999999999999999999    77889999999999877542  


Q ss_pred             --cccceeecccCCCCccccC
Q psy11822        210 --VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 --~~~~~~gt~~y~aPE~l~~  228 (229)
                        ......||+.|||||++.+
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~  180 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRM  180 (276)
T ss_dssp             ------CCCCGGGCCHHHHTT
T ss_pred             cccccccccCcccCCHHHHhc
Confidence              3345789999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-38  Score=253.43  Aligned_cols=158  Identities=18%  Similarity=0.175  Sum_probs=129.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++. ++..||||+++..       ....+.+.+|+.++++++||||+.  ++++..   ....++||||++
T Consensus        24 G~fg~Vy~~~~~-~~~~vAvK~~~~~-------~~~~~~~~~E~~~l~~l~HpnIv~--~~g~~~---~~~~~iv~Ey~~   90 (272)
T d1qpca_          24 GQFGEVWMGYYN-GHTKVAVKSLKQG-------SMSPDAFLAEANLMKQLQHQRLVR--LYAVVT---QEPIYIITEYME   90 (272)
T ss_dssp             ETTEEEEEEEET-TTEEEEEEEECTT-------SSCHHHHHHHHHHHHHCCCTTBCC--EEEEEC---SSSCEEEEECCT
T ss_pred             CCCcEEEEEEEC-CCCEEEEEEEccC-------cCCHHHHHHHHHHHHhCCCCCEeE--EEeeec---cCCeEEEEEeCC
Confidence            999999999975 6789999998753       223456799999999999999984  444432   234789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|+|..+..... ...+++.++..++.||++||.|||+++|+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus        91 ~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll----~~~~~~Kl~DFGla~~~~~~~~~  165 (272)
T d1qpca_          91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV----SDTLSCKIADFGLARLIEDNEYT  165 (272)
T ss_dssp             TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee----ecccceeeccccceEEccCCccc
Confidence            999766544321 2248888999999999999999999999999999999999    88899999999999987653   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|||||++.+
T Consensus       166 ~~~~~~gt~~y~APE~~~~  184 (272)
T d1qpca_         166 AREGAKFPIKWTAPEAINY  184 (272)
T ss_dssp             CCTTCCCCTTTSCHHHHHH
T ss_pred             cccccCCcccccChHHHhC
Confidence            2345789999999999864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-38  Score=256.33  Aligned_cols=162  Identities=15%  Similarity=0.143  Sum_probs=118.9

Q ss_pred             cCCceeeeeeecCCCCc---EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceee
Q psy11822         52 LDDIGQVNVPTDLEGGE---LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      .|+||+||+|++..+++   .||||.+.....     ....+.+.+|+++|++++||||+  ++++++.  ....+++||
T Consensus        36 ~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv--~l~g~~~--~~~~~~iv~  106 (299)
T d1jpaa_          36 AGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-----EKQRRDFLSEASIMGQFDHPNVI--HLEGVVT--KSTPVMIIT  106 (299)
T ss_dssp             ECSSSEEEEEEECC---CCEEEEEEECCSSCC-----HHHHHHHHHHHHHHTTCCCTTBC--CEEEEEC--SSSSCEEEE
T ss_pred             eCCCeEEEEEEEeCCCCEEEEEEEEEECcccC-----HHHHHHHHHHHHHHHhCCCCCCc--cEEEEEe--eCCEEEEEE
Confidence            39999999999877665   689998765321     12234678999999999999998  5555543  445689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++|+|..+....  ...+++.++..++.||++||.|||+++|+||||||+|||+    +.++.+||+|||+|+.+..
T Consensus       107 Ey~~~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         107 EFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             ECCTTEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCC--------
T ss_pred             EecCCCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE----CCCCcEEECCcccceEccC
Confidence            999999987754442  2358888999999999999999999999999999999999    8889999999999987754


Q ss_pred             cc-------ccceeecccCCCCccccC
Q psy11822        209 AV-------CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~-------~~~~~gt~~y~aPE~l~~  228 (229)
                      ..       .....||+.|||||++.+
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~  207 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQY  207 (299)
T ss_dssp             ---------------CGGGSCHHHHHS
T ss_pred             CCCcceeeecccccCCccccCHHHHhc
Confidence            31       123567899999999865

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-38  Score=257.58  Aligned_cols=161  Identities=20%  Similarity=0.214  Sum_probs=130.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhc--ccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHC--NNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~--~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+++.||||+++..           ..+.+|+.++.++ +||||+  ++++++..  .....+|+|||
T Consensus        23 G~fg~Vy~a~~~~~~~~vAiK~i~~~-----------~~~~~E~~~~~~~~~hpnIv--~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          23 GINGKVLQIFNKRTQEKFALKMLQDC-----------PKARREVELHWRASQCPHIV--RIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEECS-----------HHHHHHHHHHHHHTTSTTBC--CEEEEEEEEETTEEEEEEEEE
T ss_pred             ccCeEEEEEEECCCCCEEEEEEECCc-----------HHHHHHHHHHHHhcCCCCCC--eEEEEEeecccCCCEEEEEEE
Confidence            99999999999999999999998642           1346788886554 899998  45555533  23456899999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      ||++|+|..++.... ...+++.+++.++.||+.||+|||++||+||||||+|||+... +..+.+||+|||+|+.....
T Consensus        90 y~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~-~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          90 CLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             CCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS-STTCCEEECCCTTCEECCCC
T ss_pred             CCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc-cccccccccccceeeeccCC
Confidence            999999777655422 2469999999999999999999999999999999999999543 34568999999999887553


Q ss_pred             -cccceeecccCCCCccccC
Q psy11822        210 -VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....+||+.|||||++.+
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~  187 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGP  187 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCG
T ss_pred             CccccccCCcccCCcHHHcC
Confidence             4467899999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-39  Score=255.10  Aligned_cols=161  Identities=16%  Similarity=0.150  Sum_probs=127.3

Q ss_pred             cCCceeeeeeecC--CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDL--EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+.  .+++.||||+++....+    ....+.+.+|+++|++++||||+  ++++++..   ...++|||
T Consensus        17 ~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~----~~~~~~~~~E~~il~~l~HpnIv--~~~g~~~~---~~~~lvmE   87 (277)
T d1xbba_          17 SGNFGTVKKGYYQMKKVVKTVAVKILKNEAND----PALKDELLAEANVMQQLDNPYIV--RMIGICEA---ESWMLVME   87 (277)
T ss_dssp             ECSSEEEEEEEEECSSSEEEEEEEEEC---------CHHHHHHHHHHHHHHTCCCTTBC--CEEEEEES---SSEEEEEE
T ss_pred             cCCCeEEEEEEEccCCcCeEEEEEEEChhhCC----HHHHHHHHHHHHHHHhCCCCCCc--eEEEEecc---CCEEEEEE
Confidence            3999999999854  45689999998764322    23345789999999999999998  45555432   34689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|..++..   ...+++.++..++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+|+.+...
T Consensus        88 ~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill----~~~~~~kl~DFGla~~~~~~  160 (277)
T d1xbba_          88 MAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL----VTQHYAKISDFGLSKALRAD  160 (277)
T ss_dssp             CCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----EETTEEEECCCTTCEECCTT
T ss_pred             cCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc----cccCcccccchhhhhhcccc
Confidence            9999998777654   3468999999999999999999999999999999999999    77789999999999887543


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......||+.|||||++.+
T Consensus       161 ~~~~~~~~~~~gt~~y~APE~l~~  184 (277)
T d1xbba_         161 ENYYKAQTHGKWPVKWYAPECINY  184 (277)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHH
T ss_pred             ccccccccccCCCceecCchhhcC
Confidence                 1234678999999998854

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-38  Score=254.01  Aligned_cols=165  Identities=18%  Similarity=0.167  Sum_probs=136.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHH---HHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFID---LLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||+||+|++..+|+.||||++++....   ........+.+.+|+.++++++ ||||+  .+++.+.  +...+|+||
T Consensus        14 G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv--~~~~~~~--~~~~~~ivm   89 (277)
T d1phka_          14 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII--QLKDTYE--TNTFFFLVF   89 (277)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC--CEEEEEE--CSSEEEEEE
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeE--EEEeecc--cCcceEEEE
Confidence            99999999999999999999997653211   0111223456789999999996 99997  4555554  445689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+++|+|..++..   ...+++.+++.++.||++||+|||++||+||||||+|||+    +.++.+||+|||+|+....
T Consensus        90 E~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          90 DLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----DDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CTTCCEEECCCTTCEECCT
T ss_pred             EcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE----cCCCCeEEccchheeEccC
Confidence            99999998777654   3469999999999999999999999999999999999999    8888999999999998765


Q ss_pred             c-cccceeecccCCCCccccC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....+||+.|+|||++++
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~  183 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIEC  183 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHH
T ss_pred             CCceeeeeccCCCCCHHHhhc
Confidence            4 4456789999999999853

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-39  Score=258.64  Aligned_cols=165  Identities=21%  Similarity=0.246  Sum_probs=131.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc--Cccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN--HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |+||.||+|++..+|+.||||++++.............++.+|+.++++++  ||||+  .+++++.  +....++||||
T Consensus        15 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv--~~~~~~~--~~~~~~lv~e~   90 (273)
T d1xwsa_          15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI--RLLDWFE--RPDSFVLILER   90 (273)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBC--CEEEEEE--CSSEEEEEEEC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCcc--EEEEEEe--eCCeEEEEEEe
Confidence            999999999999999999999987642211111122345678999999986  89997  4555554  34567999999


Q ss_pred             eeCC-CCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCc
Q psy11822        131 TRRS-QYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSK  208 (229)
Q Consensus       131 ~~~~-~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~  208 (229)
                      +.++ ++..++..   ...+++.+++.++.|+++||.|||++||+||||||+|||+    +. .+.+||+|||+|+....
T Consensus        91 ~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll----~~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          91 PEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             CSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----ETTTTEEEECCCTTCEECCS
T ss_pred             ccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEE----ecCCCeEEECccccceeccc
Confidence            9864 44444333   2468999999999999999999999999999999999999    53 46999999999998877


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......+||+.|+|||++.+
T Consensus       164 ~~~~~~~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         164 TVYTDFDGTRVYSPPEWIRY  183 (273)
T ss_dssp             SCBCCCCSCGGGSCHHHHHH
T ss_pred             ccccccccCCCcCCHHHHcC
Confidence            76678899999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-38  Score=254.30  Aligned_cols=163  Identities=21%  Similarity=0.245  Sum_probs=134.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccc-cccCccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGE-ALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~-~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||+||+|++..+|+.||||++++....   .....+.+.+|+.++. .++||||+  ++++.+.  +...+|+||||+
T Consensus        13 G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~~~~e~~~l~~~~~hp~Iv--~~~~~~~--~~~~~yivmEy~   85 (320)
T d1xjda_          13 GSFGKVFLAEFKKTNQFFAIKALKKDVVL---MDDDVECTMVEKRVLSLAWEHPFLT--HMFCTFQ--TKENLFFVMEYL   85 (320)
T ss_dssp             CSSSEEEEEEETTTTEEEEEEEEEHHHHH---HTTCHHHHHHHHHHHHHHTTCTTBC--CEEEEEE--CSSEEEEEEECC
T ss_pred             CCCcEEEEEEECCCCCEEEEEEEchhhcc---ChHHHHHHHHHHHHHHHhCCCCcEE--EEEEEEc--cCCceeEEEeec
Confidence            99999999999999999999999875332   2233445567777664 68999998  4555544  345689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--  209 (229)
                      ++|+|..++..   ...+++.+++.++.||+.||.|||+++|+||||||+|||+    +..+.+||+|||+|+.....  
T Consensus        86 ~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~----~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          86 NGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL----DKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE----CTTSCEEECCCTTCBCCCCTTC
T ss_pred             CCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee----cCCCceeccccchhhhcccccc
Confidence            99998777655   3468888999999999999999999999999999999999    88889999999999876543  


Q ss_pred             cccceeecccCCCCccccCC
Q psy11822        210 VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~~  229 (229)
                      .....+||+.|+|||++.++
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~  178 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQ  178 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTC
T ss_pred             cccccCCCCCcCCHHHHcCC
Confidence            34567999999999999763

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-38  Score=253.91  Aligned_cols=161  Identities=20%  Similarity=0.210  Sum_probs=133.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|.+..+|+.||+|+++....+       ...+.+|+.+|+.++||||+  ++++++.  +...+|+|||||+
T Consensus        16 G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~-------~~~~~~Ei~il~~l~HpnIv--~~~~~~~--~~~~~~lvmE~~~   84 (321)
T d1tkia_          16 GEFGIVHRCVETSSKKTYMAKFVKVKGTD-------QVLVKKEISILNIARHRNIL--HLHESFE--SMEELVMIFEFIS   84 (321)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECCCTHH-------HHHHHHHHHHHHHSCCTTBC--CEEEEEE--ETTEEEEEECCCC
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEcCCccc-------HHHHHHHHHHHHhCCCCCCC--eEEEEEE--ECCEEEEEEecCC
Confidence            99999999999999999999998764221       22467899999999999997  5666555  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-cc
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-VC  211 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-~~  211 (229)
                      +|+|...+...  ...+++.+++.++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++..... ..
T Consensus        85 gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~--~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          85 GLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR--RSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS--SCCCEEECCCTTCEECCTTCEE
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC--CceEEEEcccchhhccccCCcc
Confidence            99976665542  2358999999999999999999999999999999999999332  3458999999999987654 44


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....||+.|+|||.+.+
T Consensus       161 ~~~~~t~~y~ape~~~~  177 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             EEEESCGGGSCHHHHTT
T ss_pred             cccccccccccchhccC
Confidence            56789999999998865

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-38  Score=253.08  Aligned_cols=161  Identities=16%  Similarity=0.152  Sum_probs=128.5

Q ss_pred             cCCceeeeeeecCC--CCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         52 LDDIGQVNVPTDLE--GGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      .|+||.||+|.+..  ++..||||+++....     ....+.+.+|+++|++++||||+  .+++++..   ..+|+|||
T Consensus        19 ~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~E~~il~~l~HpnIv--~l~g~~~~---~~~~lvmE   88 (285)
T d1u59a_          19 CGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-----KADTEEMMREAQIMHQLDNPYIV--RLIGVCQA---EALMLVME   88 (285)
T ss_dssp             CCTTEEEEEEEEC---CCEEEEEEEECSSCC-----HHHHHHHHHHHHHHHHCCCTTBC--CEEEEEES---SSEEEEEE
T ss_pred             cccCeEEEEEEEecCCCcEEEEEEEEChhcC-----HHHHHHHHHHHHHHHhCCCCCEe--eEeeeecc---CeEEEEEE
Confidence            39999999998754  455899999875321     12344678999999999999998  45554432   34789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|+|..++...  ...+++.++..++.||++||+|||+++|+||||||+|||+    +.++.+||+|||+|+.+...
T Consensus        89 ~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill----~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          89 MAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             CCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----EETTEEEECCCTTCEECTTC
T ss_pred             eCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee----ccCCceeeccchhhhccccc
Confidence            99999987764431  2358989999999999999999999999999999999999    77789999999999987543


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......||+.|||||++.+
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~  186 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINF  186 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHH
T ss_pred             ccccccccccccCccccChHHHhC
Confidence                 2234678999999999854

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-38  Score=251.73  Aligned_cols=162  Identities=24%  Similarity=0.277  Sum_probs=130.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++..+|+.||||+++.....    ....+++.+|+++|++++||||+  .+++++.  +...+|+||||+.
T Consensus        13 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~----~~~~~~~~~Ei~il~~l~Hp~Iv--~~~~~~~--~~~~~~iv~e~~~   84 (298)
T d1gz8a_          13 GTYGVVYKARNKLTGEVVALKKIRLDTET----EGVPSTAIREISLLKELNHPNIV--KLLDVIH--TENKLYLVFEFLH   84 (298)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBC--CEEEEEE--ETTEEEEEEECCS
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEehhhcC----hHHHHHHHHHHHHHHhCCCCcEE--Eeccccc--cccceeEEEeecC
Confidence            99999999999999999999999764321    23355788999999999999998  4555554  3456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++.......  ...+++.++..++.|++.||+|||++|||||||||+|||+    +.++.+||+|||+|+.....  .
T Consensus        85 ~~~~~~~~~~~--~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~----~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          85 QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECSTTHHHHHCCCSBC
T ss_pred             Cchhhhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee----cccCcceeccCCcceeccCCccc
Confidence            88654442221  2458999999999999999999999999999999999999    88889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....||+.|+|||++.+
T Consensus       159 ~~~~~gt~~y~apE~~~~  176 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLG  176 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTT
T ss_pred             ceeecccceeeehhhhcc
Confidence            456799999999998754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.6e-37  Score=251.06  Aligned_cols=155  Identities=20%  Similarity=0.319  Sum_probs=130.5

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||+||+|++..+|+.||||+++...         .+++.+|+.+|+.++ ||||+  ++++++........++||||+
T Consensus        46 G~fg~V~~a~~~~~~~~vAiK~i~~~~---------~~~~~~Ei~il~~l~~hpnIv--~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          46 GKYSEVFEAINITNNEKVVVKILKPVK---------KKKIKREIKILENLRGGPNII--TLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSSC---------HHHHHHHHHHHHHHTTSTTBC--CEEEEEECTTTCSEEEEEECC
T ss_pred             CcCeEEEEEEECCCCCEEEEEEECHHH---------HHHHHHHHHHHHhccCCCCCc--EEEEEEEecCCCceeEEEeec
Confidence            999999999999999999999987531         235688999999995 99998  455555444455689999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC-CccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ-PYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~-~~~~kl~DFg~a~~~~~~-  209 (229)
                      ++++|..+..      .+++.+++.++.||+.||.|||++||+||||||+|||+    +. ++.+||+|||+|+..... 
T Consensus       115 ~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi----~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         115 NNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI----DHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             CSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----ETTTTEEEECCGGGCEECCTTC
T ss_pred             CCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEE----cCCCCeeeecccccceeccCCC
Confidence            9999877643      48999999999999999999999999999999999999    43 347999999999887654 


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+||+.|+|||++.+
T Consensus       185 ~~~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVD  203 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTT
T ss_pred             cccccccCccccCcccccC
Confidence            4567789999999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-38  Score=250.61  Aligned_cols=165  Identities=14%  Similarity=0.086  Sum_probs=122.7

Q ss_pred             ecccCCceeeeeeecCCCC----cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccc
Q psy11822         49 FNCLDDIGQVNVPTDLEGG----ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        49 ~~~~g~fg~Vy~a~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      ..+.|+||.||+|.+..++    ..||||.++.....     .....+.+|+.++++++||||+  ++++++.  +....
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~~E~~il~~l~H~nIv--~~~g~~~--~~~~~   84 (283)
T d1mqba_          14 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-----KQRVDFLGEAGIMGQFSHHNII--RLEGVIS--KYKPM   84 (283)
T ss_dssp             EEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH-----HHHHHHHHHHHHHHTCCCTTBC--CEEEEEC--SSSSE
T ss_pred             EEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccCh-----HHHHHHHHHHHHHHhcCCCCEe--eeeEEEe--cCCce
Confidence            3345999999999987654    47999998653211     1234578999999999999998  4555543  44567


Q ss_pred             ceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcce
Q psy11822        125 VQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSAS  204 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~  204 (229)
                      ++||||+.++++.......  ...+++.++..++.|++.||.|||+++|+||||||+|||+    +.++.+||+|||+|+
T Consensus        85 ~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl----~~~~~~Kl~DFGla~  158 (283)
T d1mqba_          85 MIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSR  158 (283)
T ss_dssp             EEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC--
T ss_pred             EEEEEecccCcchhhhhcc--cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE----CCCCeEEEcccchhh
Confidence            9999999999865543331  2358888899999999999999999999999999999999    888999999999998


Q ss_pred             ecCcc-----cccceeecccCCCCccccC
Q psy11822        205 HVSKA-----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       205 ~~~~~-----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+...     ......||+.|||||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~Y~APE~l~~  187 (283)
T d1mqba_         159 VLEDDPEATYTTSGGKIPIRWTAPEAISY  187 (283)
T ss_dssp             ---------------CCCGGGSCHHHHHS
T ss_pred             cccCCCccceEeccCCCCccccCHHHHcc
Confidence            77543     1234578999999999865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-38  Score=254.27  Aligned_cols=163  Identities=17%  Similarity=0.127  Sum_probs=126.3

Q ss_pred             CCceeeeeeecCCCCc-----EEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDLEGGE-----LLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||+||+|++..+++     .||+|.+.....     ......+.+|+.+++++ +||||+  .+++++.  +....++
T Consensus        48 G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~~HpnIv--~l~~~~~--~~~~~~l  118 (325)
T d1rjba_          48 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-----SSEREALMSELKMMTQLGSHENIV--NLLGACT--LSGPIYL  118 (325)
T ss_dssp             CSSEEEEEEEEESCSSSSCEEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCEE
T ss_pred             CCCeEEEEEEEcCCCcccceeEEEEEEeccccC-----HHHHHHHHHHHHHHHHhcCCCcEe--EEEEEEe--eCCeEEE
Confidence            9999999999865443     799998865321     22344678999999998 899998  4555544  4456899


Q ss_pred             eeeeeeCCCCCccCCCCC--------------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeee
Q psy11822        127 MMEVTRRSQYTGATAPPP--------------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLV  186 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~--------------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~  186 (229)
                      |||||++|+|..++....                    ....+++.+++.++.||++||+|||+++||||||||+|||+ 
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill-  197 (325)
T d1rjba_         119 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV-  197 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE-
T ss_pred             EEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccc-
Confidence            999999999766654321                    12347788889999999999999999999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                         +.++.+||+|||+|+.....    ......||+.|||||++.+
T Consensus       198 ---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~  240 (325)
T d1rjba_         198 ---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  240 (325)
T ss_dssp             ---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             ---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC
Confidence               78889999999999877543    2346788999999998864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-37  Score=242.81  Aligned_cols=158  Identities=16%  Similarity=0.117  Sum_probs=129.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||.||+|++. +++.||||+++..       ....+.+.+|+.++++++||||+  ++++++.  +...+++||||++
T Consensus        15 G~fg~Vy~~~~~-~~~~vAvK~l~~~-------~~~~~~~~~Ev~~~~~l~HpnIv--~~~g~~~--~~~~~~iv~Ey~~   82 (258)
T d1k2pa_          15 GQFGVVKYGKWR-GQYDVAIKMIKEG-------SMSEDEFIEEAKVMMNLSHEKLV--QLYGVCT--KQRPIFIITEYMA   82 (258)
T ss_dssp             ETTEEEEEEEET-TTEEEEEEEEESS-------SSCHHHHHHHHHHHHTCCCTTBC--CEEEEEC--CSSSEEEEEECCT
T ss_pred             CCCeEEEEEEEC-CCCEEEEEEECcC-------cCCHHHHHHHHHHHHhcCCCcee--eEEEEEe--eCCceEEEEEccC
Confidence            999999999984 7889999998763       22344679999999999999998  4555443  4456899999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|++..+....  ...+++..+..++.|+++||+|||++||+||||||+||++    +.++.+||+|||+|+.....   
T Consensus        83 ~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill----~~~~~~kl~DfG~a~~~~~~~~~  156 (258)
T d1k2pa_          83 NGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----NDQGVVKVSDFGLSRYVLDDEYT  156 (258)
T ss_dssp             TEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE----CTTCCEEECCCSSCCBCSSSSCC
T ss_pred             CCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE----cCCCcEEECcchhheeccCCCce
Confidence            99965553331  2357778889999999999999999999999999999999    88889999999999876543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       157 ~~~~~~~t~~y~aPE~~~~  175 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMY  175 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHH
T ss_pred             eecccCCCCCcCCcHHhcC
Confidence            2234678999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-37  Score=245.93  Aligned_cols=158  Identities=16%  Similarity=0.153  Sum_probs=122.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+ ..||||+++..       ....+.+.+|+.++++++||||+  .+++++.   ...+++||||++
T Consensus        28 G~fg~Vy~~~~~~~-~~vAiK~l~~~-------~~~~~~~~~E~~~l~~l~h~nIv--~~~g~~~---~~~~~lv~Ey~~   94 (285)
T d1fmka3          28 GCFGEVWMGTWNGT-TRVAIKTLKPG-------TMSPEAFLQEAQVMKKLRHEKLV--QLYAVVS---EEPIYIVTEYMS   94 (285)
T ss_dssp             CSSCEEEEEEETTT-EEEEEEECCTT-------SSCHHHHHHHHHHHHHCCCTTBC--CEEEEEC---SSSCEEEECCCT
T ss_pred             CCCeEEEEEEECCC-CEEEEEEECcc-------cCCHHHHHHHHHHHHhcccCCEe--EEEEEEe---cCCeEEEEEecC
Confidence            99999999998654 67999998753       22335679999999999999998  4555543   234789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc---
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA---  209 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~---  209 (229)
                      +|++..+..... ...+++.++..++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||+|+.....   
T Consensus        95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll----~~~~~~kl~DfGla~~~~~~~~~  169 (285)
T d1fmka3          95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV----GENLVCKVADFGLARLIEDNEYT  169 (285)
T ss_dssp             TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CGGGCEEECCCCTTC--------
T ss_pred             CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE----CCCCcEEEcccchhhhccCCCce
Confidence            998655544311 2358999999999999999999999999999999999999    88889999999999877543   


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                      ......||+.|+|||++.+
T Consensus       170 ~~~~~~gt~~y~aPE~~~~  188 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALY  188 (285)
T ss_dssp             ------CCGGGSCHHHHHH
T ss_pred             eeccccccccccChHHHhC
Confidence            2245789999999999854

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-37  Score=251.85  Aligned_cols=160  Identities=26%  Similarity=0.355  Sum_probs=127.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc----ccccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC----NNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~----~~~~~~~lv~  128 (229)
                      |+||+||+|++..+|+.||||++...          .....+|+.+|+.++||||+.  +++++..    .+...+++||
T Consensus        31 G~fg~Vy~a~~~~~~~~vAiK~i~~~----------~~~~~~Ei~il~~l~h~niv~--~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          31 GSFGVVYQAKLCDSGELVAIKKVLQD----------KRFKNRELQIMRKLDHCNIVR--LRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECC----------SSSCCHHHHHHHHCCCTTBCC--EEEEEEEC--CCSCCEEEEEE
T ss_pred             CcCeEEEEEEECCCCCEEEEEEECcc----------chHHHHHHHHHHhcCCCCCCc--EEEEEEecCccCCceEEEEEE
Confidence            89999999999999999999998652          123468999999999999984  3333321    2334578999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCC-ccEEEeecCcceecC
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQP-YRVKVIDFGSASHVS  207 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~-~~~kl~DFg~a~~~~  207 (229)
                      ||++++++..+.........+++.+++.++.||+.||+|||++||+||||||+|||+    +.+ ..+||+|||+|+...
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl----~~~~~~~kl~DFG~a~~~~  174 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL----DPDTAVLKLCDFGSAKQLV  174 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE----CTTTCCEEECCCTTCEECC
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEE----ecCCCceeEecccchhhcc
Confidence            999988644332211123468899999999999999999999999999999999999    655 489999999998875


Q ss_pred             cc-cccceeecccCCCCccccC
Q psy11822        208 KA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .. .....+||+.|+|||.+.+
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~  196 (350)
T d1q5ka_         175 RGEPNVSYICSRYYRAPELIFG  196 (350)
T ss_dssp             TTSCCCSCCSCTTSCCHHHHTT
T ss_pred             CCcccccccccccccChHHhhc
Confidence            53 4456799999999998765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=249.20  Aligned_cols=160  Identities=26%  Similarity=0.348  Sum_probs=125.7

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||.||+|++..+|+.||||++++....    ....+.+.+|+.+|+.++||||+  .+++++...    ....+|+||
T Consensus        29 G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~hpniv--~l~~~~~~~~~~~~~~~~~lv~  102 (346)
T d1cm8a_          29 GAYGAVCSAVDGRTGAKVAIKKLYRPFQS----ELFAKRAYRELRLLKHMRHENVI--GLLDVFTPDETLDDFTDFYLVM  102 (346)
T ss_dssp             ----CEEEEEETTTCCEEEEEECSSTTSS----HHHHHHHHHHHHHHHHCCBTTBC--CCSEEECSCSSTTTCCCCEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEchhhcC----hHHHHHHHHHHHHHHhcCCCCee--EEEEEeccCccccccceEEEEE
Confidence            99999999999999999999998753222    12234678999999999999998  444444322    223579999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||++ .++..+...    ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+....
T Consensus       103 e~~~-~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~----~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_         103 PFMG-TDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----NEDCELKILDFGLARQADS  173 (346)
T ss_dssp             ECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCS
T ss_pred             eccc-ccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc----ccccccccccccceeccCC
Confidence            9994 444444332    469999999999999999999999999999999999999    8888999999999987765


Q ss_pred             ccccceeecccCCCCccccC
Q psy11822        209 AVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~~~~~~~gt~~y~aPE~l~~  228 (229)
                      . .....||+.|+|||++.+
T Consensus       174 ~-~~~~~~t~~y~aPE~~~~  192 (346)
T d1cm8a_         174 E-MTGYVVTRWYRAPEVILN  192 (346)
T ss_dssp             S-CCSSCSCGGGCCTHHHHT
T ss_pred             c-cccccccccccCHHHHcC
Confidence            4 356789999999999865

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=244.50  Aligned_cols=164  Identities=18%  Similarity=0.116  Sum_probs=115.8

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      |+||.||+|++.     .+++.||||+++.....     .....+.+|+..+.++ +|+||+...  .+. ......+++
T Consensus        24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~~~~e~~~l~~~~~h~~iv~~~--~~~-~~~~~~~~i   95 (299)
T d1ywna1          24 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-----SEHRALMSELKILIHIGHHLNVVNLL--GAC-TKPGGPLMV   95 (299)
T ss_dssp             CSSCEEEEEEEESTTSSSCEEEEEEEEC----CH-----HHHHHHHHHHHHHHHHCCCTTBCCEE--EEE-CSTTSCCEE
T ss_pred             cCCeEEEEEEEcCCCcccCCeEEEEEEEccccCc-----HHHHHHHHHHHHHHhhcCCCeEEEee--eee-ccCCCeEEE
Confidence            999999999864     34678999998754222     1223456777777776 678886432  222 122345799


Q ss_pred             eeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        127 MMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      |||||++|++..++....             ....+++.++..++.||++||.|||+++|+||||||+|||+    +.++
T Consensus        96 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl----~~~~  171 (299)
T d1ywna1          96 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----SEKN  171 (299)
T ss_dssp             EEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CGGG
T ss_pred             EEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE----CCCC
Confidence            999999999766643211             12347888899999999999999999999999999999999    8888


Q ss_pred             cEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+|+.....    ......||+.|||||++.+
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~  210 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  210 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhc
Confidence            9999999999876442    2345789999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=247.41  Aligned_cols=161  Identities=22%  Similarity=0.232  Sum_probs=125.4

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccc--ccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNN--VKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~--~~~~~lv~e~  130 (229)
                      |+||+||+|++..+|+.||||++++...     ....+.+.+|+.+|+.++||||+.  +++.+....  ....+++++|
T Consensus        19 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-----~~~~~~~~~Ei~il~~l~hp~iv~--~~~~~~~~~~~~~~~~~l~~~   91 (345)
T d1pmea_          19 GAYGMVCSAYDNVNKVRVAIKKISPFEH-----QTYCQRTLREIKILLRFRHENIIG--INDIIRAPTIEQMKDVYLVTH   91 (345)
T ss_dssp             --CCCEEEEEETTTCSEEEEEEECCTTC-----HHHHHHHHHHHHHHHHCCCTTBCC--CCEEECCSSTTTCCCEEEEEE
T ss_pred             ccCeEEEEEEECCCCcEEEEEEEehhcC-----hHHHHHHHHHHHHHHHcCCCCCCc--EEEEEeeccccccceEEEEEe
Confidence            9999999999999999999999875321     122346689999999999999984  333332211  1223455667


Q ss_pred             eeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc-
Q psy11822        131 TRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       131 ~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      +.+++|..++..    ..+++.+++.++.|++.||+|||++|||||||||+|||+    +..+.+||+|||+|+..... 
T Consensus        92 ~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl----~~~~~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          92 LMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL----NTTCDLKICDFGLARVADPDH  163 (345)
T ss_dssp             CCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTCCEEECCCTTCEECCGGG
T ss_pred             ecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE----CCCCCEEEcccCceeeccCCC
Confidence            778886666543    368999999999999999999999999999999999999    88889999999999876543 


Q ss_pred             ----cccceeecccCCCCccccC
Q psy11822        210 ----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ----~~~~~~gt~~y~aPE~l~~  228 (229)
                          .....+||+.|+|||++..
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~  186 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLN  186 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTT
T ss_pred             ccceeeccccccceechHHHhhc
Confidence                2355789999999999854

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-36  Score=244.34  Aligned_cols=163  Identities=20%  Similarity=0.206  Sum_probs=127.6

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc------ccccccce
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC------NNVKASVQ  126 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~------~~~~~~~l  126 (229)
                      |+||+||+|++..+|+.||||++.....    ......++.+|+.+|+.++||||+.  +++.+..      .....+++
T Consensus        21 G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~~~~E~~il~~l~h~nii~--~~~~~~~~~~~~~~~~~~~~i   94 (318)
T d3blha1          21 GTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLKHENVVN--LIEICRTKASPYNRCKGSIYL   94 (318)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEC----C----TTSSCHHHHHHHHHHHHCCCTTBCC--EEEEEEC----------CEEE
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEehhhc----chHHHHHHHHHHHHHHHhcCCCccc--eEeeeecccccccccCceEEE
Confidence            9999999999999999999999876421    1234456789999999999999984  3332211      11235789


Q ss_pred             eeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        127 MMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      ||||+.++++......   ...+++.+++.++.|++.||.|||++||+||||||+|||+    +.++.+||+|||+|+..
T Consensus        95 v~e~~~~~~~~~~~~~---~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl----~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1          95 VFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI----TRDGVLKLADFGLARAF  167 (318)
T ss_dssp             EEECCCEEHHHHHTCT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----CTTSCEEECCCTTCEEC
T ss_pred             EEeccCCCccchhhhc---ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee----cCCCcEEeeecceeeec
Confidence            9999999886655443   3458888889999999999999999999999999999999    88889999999999876


Q ss_pred             Ccc------cccceeecccCCCCccccC
Q psy11822        207 SKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       207 ~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ...      .....+||+.|+|||++.+
T Consensus       168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~  195 (318)
T d3blha1         168 SLAKNSQPNRYTNRVVTLWYRPPELLLG  195 (318)
T ss_dssp             CC-----CCCCCSCCSCGGGCCHHHHTT
T ss_pred             ccccccccccccceecCHHHhhHHHHcC
Confidence            532      2244689999999999865

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.1e-36  Score=242.06  Aligned_cols=160  Identities=24%  Similarity=0.279  Sum_probs=129.3

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++. +|+.||||+++....    .....+++.+|+.+|++++||||+  ++++.+.  +....+++|||+.
T Consensus        13 G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~~~~E~~il~~l~hpnIv--~~~~~~~--~~~~~~i~~e~~~   83 (286)
T d1ob3a_          13 GTYGVVYKAQNN-YGETFALKKIRLEKE----DEGIPSTTIREISILKELKHSNIV--KLYDVIH--TKKRLVLVFEHLD   83 (286)
T ss_dssp             ETTEEEEEEEET-TSCEEEEEEECCSSG----GGCCCHHHHHHHHGGGGCCCTTBC--CEEEEEE--CSSCEEEEEECCS
T ss_pred             CCCcEEEEEEeC-CCCEEEEEEEehhhc----ChHHHHHHHHHHHHHHhCCCCcEE--eeeeecc--cCCceeEEEEeeh
Confidence            999999999985 789999999866421    123355788999999999999998  4555544  3455799999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   .+.+++.++..++.||+.||+|||+++|+||||||+|||+    +.++.+||+|||+|.....+  .
T Consensus        84 ~~~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll----~~~~~~kl~DfG~a~~~~~~~~~  156 (286)
T d1ob3a_          84 QDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI----NREGELKIADFGLARAFGIPVRK  156 (286)
T ss_dssp             EEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTSCEEECCTTHHHHHCC----
T ss_pred             hhhHHHHHhh---cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE----cCCCCEEecccccceecccCccc
Confidence            9887666554   3569999999999999999999999999999999999999    88889999999999877543  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....|++.|+|||.+.+
T Consensus       157 ~~~~~~~~~y~~pE~~~~  174 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMG  174 (286)
T ss_dssp             -----CCCTTCCHHHHTT
T ss_pred             cceecccchhhhHHHHhC
Confidence            345679999999999865

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=245.48  Aligned_cols=161  Identities=17%  Similarity=0.138  Sum_probs=122.1

Q ss_pred             cCCceeeeeeecCCCCc----EEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         52 LDDIGQVNVPTDLEGGE----LLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      .|+||+||+|++..+|+    +||+|.++...     .....+++.+|+.++++++||||+  .+++++..   ...+++
T Consensus        19 ~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv--~l~g~~~~---~~~~~v   88 (317)
T d1xkka_          19 SGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-----SPKANKEILDEAYVMASVDNPHVC--RLLGICLT---STVQLI   88 (317)
T ss_dssp             ECSSEEEEEEEECC----CCEEEEEEEECC---------CTHHHHHHHHHHHHHCCCTTBC--CEEEEEES---SSEEEE
T ss_pred             cCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-----CHHHHHHHHHHHHHHHhCCCCCEe--eEEEEEec---CCeeEE
Confidence            39999999999988776    68888876531     123455789999999999999998  45555432   246789


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+.++++.......  ...+++..++.++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+|+...
T Consensus        89 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll----~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          89 TQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             EECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----EETTEEEECCCSHHHHTT
T ss_pred             EEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee----CCCCCeEeeccccceecc
Confidence            9999998854433321  3458888899999999999999999999999999999999    778899999999998875


Q ss_pred             cc----cccceeecccCCCCccccC
Q psy11822        208 KA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..    ......||+.|||||++.+
T Consensus       163 ~~~~~~~~~~~~gt~~y~APE~l~~  187 (317)
T d1xkka_         163 AEEKEYHAEGGKVPIKWMALESILH  187 (317)
T ss_dssp             TTCC--------CCTTTSCHHHHHH
T ss_pred             cccccccccccccCccccChHHHhc
Confidence            43    2234578999999998864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-36  Score=240.97  Aligned_cols=158  Identities=18%  Similarity=0.119  Sum_probs=124.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhh--cccccccceeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAH--CNNVKASVQMME  129 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~--~~~~~~~~lv~e  129 (229)
                      .|+||.||+|++  +|+.||||+++.....       ....++|+..++.++||||+.  +++++.  .......++|||
T Consensus        13 ~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~-------~~~~e~ei~~~~~~~HpnIv~--~~~~~~~~~~~~~~~~lv~E   81 (303)
T d1vjya_          13 KGRFGEVWRGKW--RGEEVAVKIFSSREER-------SWFREAEIYQTVMLRHENILG--FIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             CCSSSEEEEEEE--TTEEEEEEEECGGGHH-------HHHHHHHHHTSTTCCCTTBCC--EEEEEEEECSSSEEEEEEEE
T ss_pred             eCCCeEEEEEEE--CCEEEEEEEECccchh-------HHHHHHHHHHHhhCCCCcCcc--eEEEEEeCCCcceEEEEEEe
Confidence            499999999996  4899999998754221       112256777888899999984  444433  223345789999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH--------CCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ--------LGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~--------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      |+++|+|..++..    ..+++.++..++.|++.||.|||+        +||+||||||+|||+    +.++.+||+|||
T Consensus        82 y~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl----~~~~~~Kl~DFG  153 (303)
T d1vjya_          82 YHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV----KKNGTCCIADLG  153 (303)
T ss_dssp             CCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE----CTTSCEEECCCT
T ss_pred             cccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE----cCCCCeEEEecC
Confidence            9999998877765    358888889999999999999996        589999999999999    888999999999


Q ss_pred             cceecCcc------cccceeecccCCCCccccC
Q psy11822        202 SASHVSKA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      +++.....      ......||+.|||||++.+
T Consensus       154 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  186 (303)
T d1vjya_         154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             TCEEEETTTTEECC----CCSCGGGCCHHHHTT
T ss_pred             ccccccCCCcceeccccceecccCcCChhhccc
Confidence            99877432      2245789999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=240.67  Aligned_cols=160  Identities=17%  Similarity=0.118  Sum_probs=117.0

Q ss_pred             CCceeeeeeecCCC---CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLEG---GELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++..+   +..||||.++....     ....+.+.+|+.++++++||||+  .+++++.   ...+|+|||
T Consensus        18 G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv--~l~~~~~---~~~~~iv~E   87 (273)
T d1mp8a_          18 GQFGDVHQGIYMSPENPALAVAIKTCKNCTS-----DSVREKFLQEALTMRQFDHPHIV--KLIGVIT---ENPVWIIME   87 (273)
T ss_dssp             CSSSEEEEEEECCC--CCEEEEEEECTTTTS-----HHHHHHHHHHHHHHHTCCCTTBC--CEEEEEC---SSSCEEEEE
T ss_pred             CCCcEEEEEEEecCCceeEEEEEEEeccccC-----HHHHHHHHHHHHHHHhCCCCCEe--eEEEEEe---cCeEEEEEE
Confidence            99999999998654   45799998865321     22234678999999999999998  4555543   245799999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|++..+....  ...+++.+++.++.||++||.|||+++|+||||||+||++    +..+.+||+|||+|+.....
T Consensus        88 ~~~~g~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll----~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          88 LCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             CCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----EETTEEEECC----------
T ss_pred             eccCCcHHhhhhcc--CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee----cCCCcEEEccchhheeccCC
Confidence            99999966543321  2358888899999999999999999999999999999999    77789999999999877543


Q ss_pred             ---cccceeecccCCCCccccC
Q psy11822        210 ---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ---~~~~~~gt~~y~aPE~l~~  228 (229)
                         ......||+.|+|||++.+
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~  183 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINF  183 (273)
T ss_dssp             ---------CCGGGCCHHHHHH
T ss_pred             cceeccceecCcccchhhHhcc
Confidence               3345678999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.8e-36  Score=239.85  Aligned_cols=169  Identities=18%  Similarity=0.164  Sum_probs=128.9

Q ss_pred             cceeeccc---CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccc
Q psy11822         45 RKYIFNCL---DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNV  121 (229)
Q Consensus        45 ~~~~~~~~---g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~  121 (229)
                      .+|.+...   |+||.||+|++..+|+.||||++...        ...+++.+|+++++.++|+|++. .+..+.  .+.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--------~~~~~~~~E~~i~~~l~~~~~i~-~~~~~~--~~~   75 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--------TKHPQLHIESKIYKMMQGGVGIP-TIRWCG--AEG   75 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESC--------TTSCCHHHHHHHHHHSTTSTTCC-CEEEEE--EET
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchh--------ccCHHHHHHHHHHHHccCCCccc-EEEEEE--ecC
Confidence            34554443   99999999999999999999987652        12335688999999998777652 122222  233


Q ss_pred             cccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecC
Q psy11822        122 KASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFG  201 (229)
Q Consensus       122 ~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg  201 (229)
                      ...++||||++++....+...   ...+++.++..++.|++.||+|||++||+||||||+|||+... +.+..+||+|||
T Consensus        76 ~~~~ivme~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~-~~~~~vkl~DFG  151 (299)
T d1ckia_          76 DYNVMVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-KKGNLVYIIDFG  151 (299)
T ss_dssp             TEEEEEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-GGTTCEEECCCS
T ss_pred             CEEEEEEEEcCCchhhhhhhc---cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc-CCCceeeeeccC
Confidence            457899999977664444333   3468899999999999999999999999999999999998443 345589999999


Q ss_pred             cceecCcc---------cccceeecccCCCCccccC
Q psy11822        202 SASHVSKA---------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       202 ~a~~~~~~---------~~~~~~gt~~y~aPE~l~~  228 (229)
                      +|+.+...         ......||+.|||||++.+
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         152 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             SCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             cceeccccccccceeccccCCcCCCccccCHHHHhC
Confidence            99987542         1245689999999999876

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-36  Score=240.97  Aligned_cols=164  Identities=24%  Similarity=0.284  Sum_probs=126.3

Q ss_pred             CCceeeeeeecCCC-CcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc---cCccccceehhhhhhc---ccccccc
Q psy11822         53 DDIGQVNVPTDLEG-GELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL---NHAFVTLAHLVDYAHC---NNVKASV  125 (229)
Q Consensus        53 g~fg~Vy~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~ni~~~~~~~~~~~---~~~~~~~  125 (229)
                      |+||+||+|++..+ ++.||||+++.....    ......+.+|+.+++.+   +||||+.  +++++..   ......+
T Consensus        18 G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~E~~~l~~l~~~~HpnIv~--~~~~~~~~~~~~~~~~~   91 (305)
T d1blxa_          18 GAYGKVFKARDLKNGGRFVALKRVRVQTGE----EGMPLSTIREVAVLRHLETFEHPNVVR--LFDVCTVSRTDRETKLT   91 (305)
T ss_dssp             ETTEEEEEEEETTTTTEEEEEEEEEEEBCT----TSCBCTHHHHHHHHHHHHHTCCTTBCC--EEEEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEEEECCCCEEEEEEEEehhhcc----chHHHHHHHHHHHHHHHhhcCCCCcce--eeeeecccccccCceEE
Confidence            89999999999765 678999998653211    11223456777777666   7999984  4444322   2334679


Q ss_pred             eeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        126 QMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      ++|||++++.+......  ....+++..++.++.|+++||+|||+++|+||||||+|||+    +..+.+||+|||+++.
T Consensus        92 ~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi----~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          92 LVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV----TSSGQIKLADFGLARI  165 (305)
T ss_dssp             EEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECSCCSCCC
T ss_pred             EEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE----cCCCCeeecchhhhhh
Confidence            99999999875433222  12458888899999999999999999999999999999999    8888999999999987


Q ss_pred             cCcc-cccceeecccCCCCccccC
Q psy11822        206 VSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       206 ~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .... .....+||+.|||||++.+
T Consensus       166 ~~~~~~~~~~~gT~~Y~APE~~~~  189 (305)
T d1blxa_         166 YSFQMALTSVVVTLWYRAPEVLLQ  189 (305)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTT
T ss_pred             hcccccCCCcccChhhcCcchhcC
Confidence            6543 4467899999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=244.01  Aligned_cols=161  Identities=26%  Similarity=0.366  Sum_probs=121.1

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcc----cccccceee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN----NVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~----~~~~~~lv~  128 (229)
                      |+||+||+|.+..+|+.||||+++....+    .....++.+|+.+++.++||||+.  +++.+...    +...+|+||
T Consensus        28 G~fg~V~~~~d~~t~~~vAvK~i~~~~~~----~~~~~~~~~Ei~il~~l~hpnIv~--~~~~f~~~~~~~~~~~~~iv~  101 (355)
T d2b1pa1          28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQN----QTHAKRAYRELVLMKCVNHKNIIS--LLNVFTPQKTLEEFQDVYLVM  101 (355)
T ss_dssp             C--CEEEEEEETTTTEEEEEEEEESTTSS----HHHHHHHHHHHHHHHHCCCTTBCC--CSEEECSCCSTTTCCEEEEEE
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEChhhcC----HHHHHHHHHHHHHHHhcCCCCeeE--EEEEEecccccccCceeEEEE
Confidence            99999999999999999999998754322    122346689999999999999984  44443221    335689999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.++++..+..      .+++.+++.++.||+.||.|||++||+||||||+|||+    +.++.+|++|||+++....
T Consensus       102 Ey~~~~l~~~~~~------~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~----~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1         102 ELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV----KSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             ECCSEEHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----CTTCCEEECCCCC------
T ss_pred             eccchHHHHhhhc------CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc----ccccceeeechhhhhcccc
Confidence            9999888766633      48888999999999999999999999999999999999    7788999999999887755


Q ss_pred             c-cccceeecccCCCCccccCC
Q psy11822        209 A-VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       209 ~-~~~~~~gt~~y~aPE~l~~~  229 (229)
                      . .....+||+.|+|||++++.
T Consensus       172 ~~~~~~~~~t~~y~aPE~l~~~  193 (355)
T d2b1pa1         172 SFMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_dssp             ---------CCTTCCHHHHTTC
T ss_pred             ccccccccccccccChhhhcCC
Confidence            4 44567899999999999763

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-35  Score=239.33  Aligned_cols=163  Identities=18%  Similarity=0.148  Sum_probs=126.2

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .+++.||||+++....     ....+++.+|+.+++.++||||+.  +++++.  .....+++
T Consensus        24 G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-----~~~~~~~~~E~~il~~l~h~niv~--~~~~~~--~~~~~~~v   94 (301)
T d1lufa_          24 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-----ADMQADFQREAALMAEFDNPNIVK--LLGVCA--VGKPMCLL   94 (301)
T ss_dssp             CSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-----HHHHHHHHHHHHHHHTCCCTTBCC--EEEEEC--SSSSCEEE
T ss_pred             CCCeEEEEEEECCCccCCCCeEEEEEEEChhcC-----hHHHHHHHHHHHHHHhcCCCCccc--ceeeec--cCCceEEE
Confidence            999999999864     4578999999875321     123446799999999999999974  444433  44567999


Q ss_pred             eeeeeCCCCCccCCCC---------------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeee
Q psy11822        128 MEVTRRSQYTGATAPP---------------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLV  186 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~---------------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~  186 (229)
                      |||+++|++..++...                     .....+++.++..++.|++.||+|||+++||||||||+|||+ 
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILl-  173 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-  173 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEE-
Confidence            9999999866554221                     112247777889999999999999999999999999999999 


Q ss_pred             CCCCCCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        187 DPVRQPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       187 ~~~~~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                         +.++.+||+|||+|+...+.    ......||+.|+|||++.+
T Consensus       174 ---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (301)
T d1lufa_         174 ---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  216 (301)
T ss_dssp             ---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             ---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc
Confidence               88899999999999876543    2245688899999998864

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.1e-35  Score=235.27  Aligned_cols=162  Identities=15%  Similarity=0.194  Sum_probs=123.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-ccccceehhhhhhcccccccceeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      |+||.||+|++..+|+.||||+++..        .....+.+|++.++.+.| +|++  .+.+++.  .....++||||+
T Consensus        16 G~fG~Vy~a~~~~~~~~vAvK~~~~~--------~~~~~~~~e~~~~~~l~~~~~i~--~~~~~~~--~~~~~~~vme~~   83 (293)
T d1csna_          16 GSFGVIFEGTNLLNNQQVAIKFEPRR--------SDAPQLRDEYRTYKLLAGCTGIP--NVYYFGQ--EGLHNVLVIDLL   83 (293)
T ss_dssp             CSSCEEEEEEETTTTEEEEEEEEECC--------TTSCCHHHHHHHHHHTTTCTTCC--CEEEEEE--ETTEEEEEEECC
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEccc--------cCcHHHHHHHHHHHHhcCCCCCC--EEEEEee--cCCccEEEEEec
Confidence            99999999999999999999987542        123355778888888865 6765  3444443  345579999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCC-CCCccEEEeecCcceecCcc-
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPV-RQPYRVKVIDFGSASHVSKA-  209 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~-~~~~~~kl~DFg~a~~~~~~-  209 (229)
                      . +++..+....  ...+++.++..++.|++.||.|||++||+||||||+|||+.... ...+.+||+|||+|+..... 
T Consensus        84 ~-~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          84 G-PSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             C-CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             C-CCHHHHHHhh--ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence            5 4543333321  23588888999999999999999999999999999999996532 23568999999999876432 


Q ss_pred             --------cccceeecccCCCCccccCC
Q psy11822        210 --------VCNTYLQSRYYRAPEIILGE  229 (229)
Q Consensus       210 --------~~~~~~gt~~y~aPE~l~~~  229 (229)
                              .....+||+.|||||++.+.
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~  188 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGR  188 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTC
T ss_pred             cccceeecccCceEEchhhcCHHHhcCC
Confidence                    23456899999999998763

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-35  Score=234.02  Aligned_cols=162  Identities=18%  Similarity=0.164  Sum_probs=117.9

Q ss_pred             CCceeeeeeecCC-CC--cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeee
Q psy11822         53 DDIGQVNVPTDLE-GG--ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~-~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  129 (229)
                      |+||.||+|++.. ++  ..||||++++.....   ....+.+.+|+.+|++++||||+  .+++++..   ...++|||
T Consensus        19 G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv--~~~g~~~~---~~~~lv~e   90 (273)
T d1u46a_          19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ---PEAMDDFIREVNAMHSLDHRNLI--RLYGVVLT---PPMKMVTE   90 (273)
T ss_dssp             ---CCCEEEEEECTTSCEEEEEEEC-----------CHHHHHHHHHHHHHHHCCCTTBC--CEEEEECS---SSCEEEEE
T ss_pred             CCCeEEEEEEEECCCCcEEEEEEEEEChhhcCC---HHHHHHHHHHHHHHHhCCCCCEE--EEEEEEee---cchheeee
Confidence            9999999998643 33  479999987654322   23445789999999999999998  45554432   34689999


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+++|++.......  ...+++..++.++.|++.||.|||+++|+||||||+||++    +.++.+||+|||+++.....
T Consensus        91 ~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll----~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          91 LAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             CCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE----EETTEEEECCCTTCEECCC-
T ss_pred             eecCcchhhhhhcc--cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcc----ccccceeeccchhhhhcccC
Confidence            99999955443321  2458889999999999999999999999999999999999    67779999999999987543


Q ss_pred             -----cccceeecccCCCCccccC
Q psy11822        210 -----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 -----~~~~~~gt~~y~aPE~l~~  228 (229)
                           ......|+..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~  188 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKT  188 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHH
T ss_pred             CCcceecCccccCcccCCHHHHhC
Confidence                 2234567889999999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-35  Score=239.46  Aligned_cols=161  Identities=25%  Similarity=0.352  Sum_probs=126.8

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhc---ccccccceeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHC---NNVKASVQMME  129 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~lv~e  129 (229)
                      |+||+||+|++..+|+.||||++++...+    ....+++.+|+.+|+.++|||++.  +++++..   .+....+++|+
T Consensus        29 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~h~~iv~--~~~~~~~~~~~~~~~~~~i~~  102 (348)
T d2gfsa1          29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQS----IIHAKRTYRELRLLKHMKHENVIG--LLDVFTPARSLEEFNDVYLVT  102 (348)
T ss_dssp             GTTSSEEEEEETTTTEEEEEEECSCTTSS----HHHHHHHHHHHHHHHHCCCTTBCC--CSEEECSCSSTTTCCCCEEEE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEECchhcC----hHHHHHHHHHHHHHHhcCCCCeee--EEEEEeeccccccCceEEEEE
Confidence            99999999999999999999998753221    112345689999999999999983  3333321   12234567788


Q ss_pred             eeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc
Q psy11822        130 VTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA  209 (229)
Q Consensus       130 ~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~  209 (229)
                      |+.+|+|..+...    +.+++.+++.++.||+.||+|||++||+||||||+|||+    +.++.+|++|||+|......
T Consensus       103 ~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi----~~~~~~kl~dfg~a~~~~~~  174 (348)
T d2gfsa1         103 HLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV----NEDCELKILDFGLARHTDDE  174 (348)
T ss_dssp             ECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTCCEEECCC----CCTGG
T ss_pred             eecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc----cccccccccccchhcccCcc
Confidence            8889998777654    469999999999999999999999999999999999999    88889999999999876543


Q ss_pred             cccceeecccCCCCccccC
Q psy11822        210 VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       210 ~~~~~~gt~~y~aPE~l~~  228 (229)
                       .....||+.|+|||++.+
T Consensus       175 -~~~~~g~~~y~apE~~~~  192 (348)
T d2gfsa1         175 -MTGYVATRWYRAPEIMLN  192 (348)
T ss_dssp             -GSSSCHHHHTSCHHHHTT
T ss_pred             -cccccccccccCchhhcC
Confidence             356789999999998765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-35  Score=236.40  Aligned_cols=166  Identities=17%  Similarity=0.063  Sum_probs=127.6

Q ss_pred             cccCCceeeeeeecCCCCc--EEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccce
Q psy11822         50 NCLDDIGQVNVPTDLEGGE--LLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASVQ  126 (229)
Q Consensus        50 ~~~g~fg~Vy~a~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~l  126 (229)
                      .+.|+||.||+|++..+|.  .||||.++....     ....+.+.+|+++|+++ +||||+  .+++++.  +....++
T Consensus        18 iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~E~~~l~~l~~HpnIv--~~~~~~~--~~~~~~i   88 (309)
T d1fvra_          18 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-----KDDHRDFAGELEVLCKLGHHPNII--NLLGACE--HRGYLYL   88 (309)
T ss_dssp             EECGGGCEEEEEEEEETTEEEEEEEEEEECC-----------CHHHHHHHHHTTCCCCTTBC--CEEEEEE--ETTEEEE
T ss_pred             EeeCCCcEEEEEEECCCCeEEEEEEEEECcccC-----hHHHHHHHHHHHHHHhccCCCCEe--eEEEEEe--cCCeeEE
Confidence            3349999999999988877  467787654221     22344679999999998 799998  4555544  3456899


Q ss_pred             eeeeeeCCCCCccCCCC-------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCc
Q psy11822        127 MMEVTRRSQYTGATAPP-------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPY  193 (229)
Q Consensus       127 v~e~~~~~~l~~~~~~~-------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~  193 (229)
                      ||||+++|++..++...             .....+++..+..++.||+.||.|||+++|+||||||+|||+    +..+
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~----~~~~  164 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----GENY  164 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----CGGG
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE----cCCC
Confidence            99999999977765432             123468888899999999999999999999999999999999    8888


Q ss_pred             cEEEeecCcceecCcc-cccceeecccCCCCccccC
Q psy11822        194 RVKVIDFGSASHVSKA-VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       194 ~~kl~DFg~a~~~~~~-~~~~~~gt~~y~aPE~l~~  228 (229)
                      .+||+|||+|+..... ......||+.|+|||.+.+
T Consensus       165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~  200 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  200 (309)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHH
T ss_pred             ceEEccccccccccccccccceecCCcccchHHhcc
Confidence            9999999999876554 2345678999999999854

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=232.48  Aligned_cols=158  Identities=19%  Similarity=0.172  Sum_probs=119.7

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeee
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVT  131 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  131 (229)
                      .|+||.||+|++.  |..||||+++.+        ...+.+.+|++++++++||||+  ++++++.. +...+++||||+
T Consensus        17 ~G~fg~Vy~~~~~--~~~vAvK~i~~~--------~~~~~~~~E~~~l~~l~HpnIv--~~~g~~~~-~~~~~~lv~ey~   83 (262)
T d1byga_          17 KGEFGDVMLGDYR--GNKVAVKCIKND--------ATAQAFLAEASVMTQLRHSNLV--QLLGVIVE-EKGGLYIVTEYM   83 (262)
T ss_dssp             ECSSCEEEEEEET--TEEEEEEECCCC--------C--HHHHHTHHHHTTCCCTTBC--CEEEEECC-C--CCEEEECCC
T ss_pred             cCCCeEEEEEEEC--CeEEEEEEECcH--------HHHHHHHHHHHHHHhCCCCCEe--eEEEEEEe-cCCcEEEEEecc
Confidence            3999999999985  889999999753        2234678999999999999998  45544322 223479999999


Q ss_pred             eCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcccc
Q psy11822        132 RRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVC  211 (229)
Q Consensus       132 ~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~~~  211 (229)
                      ++|++..++.... ...+++..++.++.||+.||.|||+++|+||||||+|||+    +.++.+||+|||+++...... 
T Consensus        84 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~----~~~~~~kl~dfg~s~~~~~~~-  157 (262)
T d1byga_          84 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV----SEDNVAKVSDFGLTKEASSTQ-  157 (262)
T ss_dssp             TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTSCEEECCCCC---------
T ss_pred             CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee----cCCCCEeecccccceecCCCC-
Confidence            9999777654311 1247888899999999999999999999999999999999    888899999999998765543 


Q ss_pred             cceeecccCCCCccccC
Q psy11822        212 NTYLQSRYYRAPEIILG  228 (229)
Q Consensus       212 ~~~~gt~~y~aPE~l~~  228 (229)
                      ....+|+.|+|||++.+
T Consensus       158 ~~~~~~~~y~aPE~l~~  174 (262)
T d1byga_         158 DTGKLPVKWTAPEALRE  174 (262)
T ss_dssp             ----CCTTTSCHHHHHH
T ss_pred             ccccccccCCChHHHhC
Confidence            45678999999998854

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-35  Score=232.89  Aligned_cols=161  Identities=22%  Similarity=0.246  Sum_probs=131.9

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      |+||+||+|++..+|+.||||+++....    ......++.+|+.+++.++||||+.  +++.+.  +....++||+++.
T Consensus        13 G~fg~V~~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~~E~~il~~l~h~niv~--~~~~~~--~~~~~~iv~~~~~   84 (292)
T d1unla_          13 GTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLKELKHKNIVR--LHDVLH--SDKKLTLVFEFCD   84 (292)
T ss_dssp             CSSSEEEEEEETTTCCEEEEEEEESSCS----STTHHHHHHHHHHHHTTCCCTTBCC--EEEEEE--CSSEEEEEEECCS
T ss_pred             CcCeEEEEEEECCCCcEEEEEEEehhhC----ChHHHHHHHHHHHHHHhcCcCCEEe--eccccc--cccceeEEeeecc
Confidence            9999999999999999999999865321    1223457789999999999999974  444443  3445789999999


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCcc--c
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKA--V  210 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~~--~  210 (229)
                      ++++..+...   .+.+++.+++.++.|++.||+|||++||+||||||+|||+    +.++.+||+|||.|+.....  .
T Consensus        85 ~~~l~~~~~~---~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli----~~~~~~kl~DFG~a~~~~~~~~~  157 (292)
T d1unla_          85 QDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRC  157 (292)
T ss_dssp             EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----CTTCCEEECCCTTCEECCSCCSC
T ss_pred             cccccccccc---ccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc----ccCCceeeeecchhhcccCCCcc
Confidence            9986665544   3468888899999999999999999999999999999999    77789999999999987553  3


Q ss_pred             ccceeecccCCCCccccC
Q psy11822        211 CNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       211 ~~~~~gt~~y~aPE~l~~  228 (229)
                      .....+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~~pe~~~~  175 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTT
T ss_pred             ceeeccccchhhhhHhcc
Confidence            345677888999998865

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.2e-34  Score=234.20  Aligned_cols=164  Identities=18%  Similarity=0.102  Sum_probs=127.4

Q ss_pred             ccCCceeeeeeecCCCC---cEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         51 CLDDIGQVNVPTDLEGG---ELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        51 ~~g~fg~Vy~a~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      +.|+||+||+|++..++   ..||||.++...     .....+++.+|+++|++++||||+  .++++... .....++|
T Consensus        36 G~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv--~~~g~~~~-~~~~~~lv  107 (311)
T d1r0pa_          36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVL--SLLGICLR-SEGSPLVV  107 (311)
T ss_dssp             EEETTEEEEEEEECC----CEEEEEEEECCCC-----CHHHHHHHHHHHHHHHTCCCTTBC--CCCEEEEE-TTTEEEEE
T ss_pred             eecCCeEEEEEEEECCCCEEEEEEEEEECccc-----CHHHHHHHHHHHHHHHhCCCCCEe--EEeEEEEe-cCCceEEE
Confidence            44999999999986643   369999886421     122345789999999999999998  45554432 22357899


Q ss_pred             eeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecC
Q psy11822        128 MEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVS  207 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~  207 (229)
                      |||+++|++..+....  ...+++..++.++.|++.||.|||+.+|+||||||+|||+    +.++.+||+|||+++...
T Consensus       108 ~E~~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl----~~~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMY  181 (311)
T ss_dssp             EECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CTTCCEEECSSGGGCCTT
T ss_pred             EEEeecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE----CCCCCEEEecccchhhcc
Confidence            9999999977665542  2346667788999999999999999999999999999999    888899999999998775


Q ss_pred             cc------cccceeecccCCCCccccC
Q psy11822        208 KA------VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       208 ~~------~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..      ......||+.|+|||.+.+
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  208 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQT  208 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHH
T ss_pred             ccccccceecccccccccccChHHHhc
Confidence            43      2234678999999998753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.3e-34  Score=231.51  Aligned_cols=163  Identities=16%  Similarity=0.187  Sum_probs=124.4

Q ss_pred             CCceeeeeeecCCCC-------cEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhccccccc
Q psy11822         53 DDIGQVNVPTDLEGG-------ELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKAS  124 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~  124 (229)
                      |+||.||+|++..++       ..||||++++....     .....+.+|...+.++ +||||+.  +++.+.  +...+
T Consensus        24 G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~~e~~~l~~~~~HpnIv~--~~~~~~--~~~~~   94 (299)
T d1fgka_          24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-----KDLSDLISEMEMMKMIGKHKNIIN--LLGACT--QDGPL   94 (299)
T ss_dssp             ----CEEEEEEECC----CCCEEEEEEECCCTTCCH-----HHHHHHHHHHHHHHHHCCCTTBCC--EEEEEC--SSSSC
T ss_pred             cCCcEEEEEEEcCCCcccccCceEEEEEEECcccCh-----HHHHHHHHHHHHHHHhcCCCeEEe--cccccc--cCCeE
Confidence            999999999876543       47999998764221     2234567888888888 8999984  444443  44568


Q ss_pred             ceeeeeeeCCCCCccCCCCC-------------CCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCC
Q psy11822        125 VQMMEVTRRSQYTGATAPPP-------------PAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQ  191 (229)
Q Consensus       125 ~lv~e~~~~~~l~~~~~~~~-------------~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~  191 (229)
                      ++||||+++|++..++....             +...+++.++..++.|++.||.|||+++||||||||+|||+    +.
T Consensus        95 ~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl----~~  170 (299)
T d1fgka_          95 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TE  170 (299)
T ss_dssp             EEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----CT
T ss_pred             EEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee----cC
Confidence            99999999999766654322             23458888999999999999999999999999999999999    88


Q ss_pred             CccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        192 PYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       192 ~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ++.+||+|||+++.....    ......||+.|+|||++.+
T Consensus       171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  211 (299)
T d1fgka_         171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  211 (299)
T ss_dssp             TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH
T ss_pred             CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC
Confidence            889999999999877543    2345789999999998864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.2e-34  Score=232.49  Aligned_cols=163  Identities=17%  Similarity=0.160  Sum_probs=127.4

Q ss_pred             CCceeeeeeecC-----CCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhccccccccee
Q psy11822         53 DDIGQVNVPTDL-----EGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQM  127 (229)
Q Consensus        53 g~fg~Vy~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv  127 (229)
                      |+||.||+|++.     .++..||||+++....     ......+.+|+.++++++||||+  .+++.+.  .....++|
T Consensus        31 G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv--~~~~~~~--~~~~~~lv  101 (308)
T d1p4oa_          31 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-----MRERIEFLNEASVMKEFNCHHVV--RLLGVVS--QGQPTLVI  101 (308)
T ss_dssp             CSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHGGGCCCTTBC--CEEEEEC--SSSSCEEE
T ss_pred             CCCeEEEEEEECCcccCCCCcEEEEEEECcccC-----hHHHHHHHHHHHHHHHcCCCCEe--eeeeEEe--cCCceeEE
Confidence            999999999875     2467899999875321     12234678999999999999998  4444443  34567999


Q ss_pred             eeeeeCCCCCccCCCC-------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeec
Q psy11822        128 MEVTRRSQYTGATAPP-------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDF  200 (229)
Q Consensus       128 ~e~~~~~~l~~~~~~~-------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DF  200 (229)
                      |||+++|++..++...       .....+++..+..++.|+++||.|||+++|+||||||+|||+    +.++.+||+||
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl----d~~~~~Kl~DF  177 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDF  177 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE----CTTCCEEECCT
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee----cCCceEEEeec
Confidence            9999999976553321       112235666778899999999999999999999999999999    88899999999


Q ss_pred             CcceecCcc----cccceeecccCCCCccccC
Q psy11822        201 GSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      |+|+.....    ......||+.|+|||++.+
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHcc
Confidence            999877543    2345689999999998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-34  Score=232.35  Aligned_cols=164  Identities=19%  Similarity=0.153  Sum_probs=127.9

Q ss_pred             cCCceeeeeeec-----CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccc-cCccccceehhhhhhcccccccc
Q psy11822         52 LDDIGQVNVPTD-----LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEAL-NHAFVTLAHLVDYAHCNNVKASV  125 (229)
Q Consensus        52 ~g~fg~Vy~a~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~  125 (229)
                      .|+||.||+|++     ..+++.||||+++....     ......+.+|+.+++.+ +||||+  .+++++.  +....+
T Consensus        33 ~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-----~~~~~~~~~E~~~~~~l~~HpnIv--~~~g~~~--~~~~~~  103 (311)
T d1t46a_          33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-----LTEREALMSELKVLSYLGNHMNIV--NLLGACT--IGGPTL  103 (311)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-----HHHHHHHHHHHHHHHHHCCCTTBC--CEEEEEC--SSSSCE
T ss_pred             ecCCeEEEEEEEeccccCCCCeEEEEEEECcccC-----HHHHHHHHHHHHHHHhccCCCCEE--EEEEEEe--eCCEEE
Confidence            399999999975     35678999999876321     12233578999999999 799998  4444443  445579


Q ss_pred             eeeeeeeCCCCCccCCCC---------------CCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCC
Q psy11822        126 QMMEVTRRSQYTGATAPP---------------PPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVR  190 (229)
Q Consensus       126 lv~e~~~~~~l~~~~~~~---------------~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~  190 (229)
                      +||||+++|++..++...               .....+++.++..++.||+.||+|||+++++||||||+||++    +
T Consensus       104 lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~----~  179 (311)
T d1t46a_         104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL----T  179 (311)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----E
T ss_pred             EEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc----c
Confidence            999999999865553321               112357788889999999999999999999999999999999    7


Q ss_pred             CCccEEEeecCcceecCcc----cccceeecccCCCCccccC
Q psy11822        191 QPYRVKVIDFGSASHVSKA----VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       191 ~~~~~kl~DFg~a~~~~~~----~~~~~~gt~~y~aPE~l~~  228 (229)
                      ..+.+||+|||+++.....    .....+||+.|+|||++.+
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  221 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN  221 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcC
Confidence            7789999999999877543    2245789999999998864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-34  Score=232.01  Aligned_cols=163  Identities=20%  Similarity=0.237  Sum_probs=130.0

Q ss_pred             CCceeeeeeec---CCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccC-ccccceehhhhhhcccccccceee
Q psy11822         53 DDIGQVNVPTD---LEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNH-AFVTLAHLVDYAHCNNVKASVQMM  128 (229)
Q Consensus        53 g~fg~Vy~a~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni~~~~~~~~~~~~~~~~~~lv~  128 (229)
                      |+||+||+|++   ..+|+.||||++++....  ......+.+.+|++++++++| |||+.  +++++.  +....+++|
T Consensus        35 G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~--~~~~~~~~~~~E~~il~~l~h~pnIv~--~~~~~~--~~~~~~~v~  108 (322)
T d1vzoa_          35 GAYGKVFLVRKISGHDTGKLYAMKVLKKATIV--QKAKTTEHTRTERQVLEHIRQSPFLVT--LHYAFQ--TETKLHLIL  108 (322)
T ss_dssp             TTTEEEEEEEECSSTTTTCEEEEEEESEEEEE--EEESSGGGCCCHHHHHHHHHTCTTBCC--EEEEEE--ETTEEEEEE
T ss_pred             CCCeEEEEEEECccCCCCcEEEEEEEehHHhc--cchHHHHHHHHHHHHHHhccCCCeEEE--eeeeec--cCCceeeee
Confidence            99999999986   457999999998653110  011234567899999999977 78874  444443  334679999


Q ss_pred             eeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEeecCcceecCc
Q psy11822        129 EVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK  208 (229)
Q Consensus       129 e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~~~  208 (229)
                      ||+.+|++...+..   ...+++..+..++.|++.||.|||+++|+||||||+||++    +.++.+||+|||+|+.+..
T Consensus       109 e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill----~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         109 DYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL----DSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             CCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE----CTTSCEEESCSSEEEECCG
T ss_pred             ecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee----cCCCCEEEeeccchhhhcc
Confidence            99999997766554   3457778889999999999999999999999999999999    8888999999999987754


Q ss_pred             c---cccceeecccCCCCccccC
Q psy11822        209 A---VCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       209 ~---~~~~~~gt~~y~aPE~l~~  228 (229)
                      .   ......|++.|+|||.+.+
T Consensus       182 ~~~~~~~~~~g~~~~~~pe~~~~  204 (322)
T d1vzoa_         182 DETERAYDFCGTIEYMAPDIVRG  204 (322)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             cccccccccccccccchhHHhhc
Confidence            3   3356789999999999865

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1e-30  Score=215.08  Aligned_cols=168  Identities=22%  Similarity=0.258  Sum_probs=117.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccc---------eehhhhhhcccccc
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTL---------AHLVDYAHCNNVKA  123 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~---------~~~~~~~~~~~~~~  123 (229)
                      |+||+||+|++..+|+.||||+++.....       .+.+.+|+.+++.++|+|+..         +.+++++.......
T Consensus        24 G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~-------~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~   96 (362)
T d1q8ya_          24 GHFSTVWLAKDMVNNTHVAMKIVRGDKVY-------TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG   96 (362)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSCHHH-------HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEeccccc-------hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccc
Confidence            99999999999999999999998764221       123466777777666544321         13444443333334


Q ss_pred             cceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH-CCCccccCCCCCeeeeCCCC--CCccEEEeec
Q psy11822        124 SVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ-LGLIHADLKPENIMLVDPVR--QPYRVKVIDF  200 (229)
Q Consensus       124 ~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~-~~iiHrDlkp~Nil~~~~~~--~~~~~kl~DF  200 (229)
                      .+++|+++..+..............+++..++.++.||+.||.|||+ .||+||||||+|||+...+.  ....++|+||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~df  176 (362)
T d1q8ya_          97 VHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL  176 (362)
T ss_dssp             EEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred             eeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeec
Confidence            56667766555421111111123457788889999999999999998 89999999999999943211  1135999999


Q ss_pred             CcceecCcccccceeecccCCCCccccC
Q psy11822        201 GSASHVSKAVCNTYLQSRYYRAPEIILG  228 (229)
Q Consensus       201 g~a~~~~~~~~~~~~gt~~y~aPE~l~~  228 (229)
                      |.|...... ....+||+.|+|||++.+
T Consensus       177 g~s~~~~~~-~~~~~gt~~y~aPE~~~~  203 (362)
T d1q8ya_         177 GNACWYDEH-YTNSIQTREYRSPEVLLG  203 (362)
T ss_dssp             TTCEETTBC-CCSCCSCGGGCCHHHHHT
T ss_pred             ccccccccc-cccccccccccChhhccc
Confidence            999876543 356789999999998865

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=7.8e-25  Score=164.40  Aligned_cols=134  Identities=15%  Similarity=0.167  Sum_probs=96.4

Q ss_pred             cCCceeeeeeecCCCCcEEEEehhhHHHHHH------------HHHhhhhhhhhccccccccccCccccceehhhhhhcc
Q psy11822         52 LDDIGQVNVPTDLEGGELLAEKADRREFIDL------------LKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCN  119 (229)
Q Consensus        52 ~g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~  119 (229)
                      .|+||.||+|++. +|+.||||+++......            .........+.+|...+.++.|+++..  .+++    
T Consensus        10 ~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~--~~~~----   82 (191)
T d1zara2          10 EGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK--VYAW----   82 (191)
T ss_dssp             ECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC--EEEE----
T ss_pred             eCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce--EEEe----
Confidence            3999999999974 78999999865321110            000111223456778888888887652  2211    


Q ss_pred             cccccceeeeeeeCCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHHCCCccccCCCCCeeeeCCCCCCccEEEee
Q psy11822        120 NVKASVQMMEVTRRSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVID  199 (229)
Q Consensus       120 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~~~iiHrDlkp~Nil~~~~~~~~~~~kl~D  199 (229)
                        ...+++|||+++..+..          ++...+..++.|++.||+|||++||+||||||+|||+    +.+ .++|+|
T Consensus        83 --~~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv----~~~-~~~liD  145 (191)
T d1zara2          83 --EGNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEE-GIWIID  145 (191)
T ss_dssp             --ETTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE----ETT-EEEECC
T ss_pred             --cCCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheee----eCC-CEEEEE
Confidence              12379999999865432          4556667899999999999999999999999999999    433 589999


Q ss_pred             cCcceecCcc
Q psy11822        200 FGSASHVSKA  209 (229)
Q Consensus       200 Fg~a~~~~~~  209 (229)
                      ||+|+....+
T Consensus       146 FG~a~~~~~~  155 (191)
T d1zara2         146 FPQSVEVGEE  155 (191)
T ss_dssp             CTTCEETTST
T ss_pred             CCCcccCCCC
Confidence            9999887644

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.21  E-value=5e-07  Score=68.89  Aligned_cols=131  Identities=16%  Similarity=0.117  Sum_probs=76.2

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTR  132 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~  132 (229)
                      ++-+.||+...  ++..+++|......      ......+.+|...+..+. ..+..+.++.+..  .....++||++++
T Consensus        25 ~s~~~v~rv~~--~~~~~vlk~~~~~~------~~~~~~~~~E~~~l~~l~-~~vpvP~vl~~~~--~~~~~~lv~~~l~   93 (263)
T d1j7la_          25 MSPAKVYKLVG--ENENLYLKMTDSRY------KGTTYDVEREKDMMLWLE-GKLPVPKVLHFER--HDGWSNLLMSEAD   93 (263)
T ss_dssp             CSSSEEEEEEC--SSCEEEEEEECGGG------TTSTTCHHHHHHHHHHHT-TTSCCCCEEEEEE--ETTEEEEEEECCS
T ss_pred             CCCCcEEEEEe--CCCeEEEEEcCCCc------ccchhhHHHHHHHHHHHh-ccCCCCcEEEEEe--cCCceEEEEEecc
Confidence            33467998763  46678888765421      112234466777766553 2333344444433  2244689999998


Q ss_pred             CCCCCccCCCCCCCCccccCCccchHHHHHHHHHHHHH------------------------------------------
Q psy11822        133 RSQYTGATAPPPPAQVLVPAPPGNVTLQVLTALLKLKQ------------------------------------------  170 (229)
Q Consensus       133 ~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~LH~------------------------------------------  170 (229)
                      |.++.....        +......++.+++..++.||+                                          
T Consensus        94 G~~~~~~~~--------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (263)
T d1j7la_          94 GVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK  165 (263)
T ss_dssp             SEEHHHHTT--------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCS
T ss_pred             ccccccccc--------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccch
Confidence            876422211        111112234444444444442                                          


Q ss_pred             -----------------CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 -----------------LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 -----------------~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                                       ..++|+|+.|.|||+    ++++.+-|+||+.+..-
T Consensus       166 ~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~----~~~~~~~lIDwe~a~~g  214 (263)
T d1j7la_         166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFV----KDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             SHHHHHHHHHHSCCCCCEEEECSCCCTTSEEE----ETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhcCCcCCcEEEEeeccCcceee----cCCceEEEeechhcccC
Confidence                             125899999999999    66556679999998754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.04  E-value=1.3e-06  Score=66.17  Aligned_cols=70  Identities=13%  Similarity=0.081  Sum_probs=44.9

Q ss_pred             ceeeeeeecCCCCcEEEEehhhHHHHHHHHHhhhhhhhhccccccccccCccccceehhhhhhcccccccceeeeeeeCC
Q psy11822         55 IGQVNVPTDLEGGELLAEKADRREFIDLLKRMLTMDQVERRITPGEALNHAFVTLAHLVDYAHCNNVKASVQMMEVTRRS  134 (229)
Q Consensus        55 fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~  134 (229)
                      -+.||+... .++..+++|.....         ....+.+|+..++.+....+..+.++....  +....++||++++|.
T Consensus        24 ~~~v~r~~~-~~~~~~vlK~~~~~---------~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~--~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          24 DAAVFRLSA-QGRPVLFVKTDLSG---------ALNELQDEAARLSWLATTGVPCAAVLDVVT--EAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             SCEEEEEEC-TTSCCEEEEEECSC---------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE--CSSCEEEEEECCSSE
T ss_pred             CCeEEEEEe-CCCCEEEEEeCCcc---------CHhHHHHHHHHHHHHHhcCCCCCceeeecc--cccceEEEEEeeecc
Confidence            367898875 45777899975542         122456778778777555554455554433  334568999999876


Q ss_pred             CC
Q psy11822        135 QY  136 (229)
Q Consensus       135 ~l  136 (229)
                      ++
T Consensus        92 ~~   93 (255)
T d1nd4a_          92 DL   93 (255)
T ss_dssp             ET
T ss_pred             cc
Confidence            54

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.81  E-value=2.4e-06  Score=69.27  Aligned_cols=79  Identities=15%  Similarity=0.011  Sum_probs=41.0

Q ss_pred             CCceeeeeeecCCCCcEEEEehhhHHHHHHH-HHhhhhhhhhcccccccccc-Cccccceehhhhhhcccccccceeeee
Q psy11822         53 DDIGQVNVPTDLEGGELLAEKADRREFIDLL-KRMLTMDQVERRITPGEALN-HAFVTLAHLVDYAHCNNVKASVQMMEV  130 (229)
Q Consensus        53 g~fg~Vy~a~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~Ei~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~  130 (229)
                      |....||+.++..+++.+++|.-.+...... ......++..+|...|+.+. +.....+.++.+    +....++|||+
T Consensus        37 G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----d~~~~~lvmE~  112 (392)
T d2pula1          37 GNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS----DTEMAVTVMED  112 (392)
T ss_dssp             SSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE----ETTTTEEEECC
T ss_pred             CceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE----cCCCCEEEEec
Confidence            6678899999877788999996432110000 01112344566777776652 222222333322    22335789999


Q ss_pred             eeCCC
Q psy11822        131 TRRSQ  135 (229)
Q Consensus       131 ~~~~~  135 (229)
                      +++..
T Consensus       113 L~~~~  117 (392)
T d2pula1         113 LSHLK  117 (392)
T ss_dssp             CTTSE
T ss_pred             cCCcc
Confidence            97643

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=3e-05  Score=60.92  Aligned_cols=30  Identities=23%  Similarity=0.325  Sum_probs=23.7

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCcceec
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHV  206 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~~  206 (229)
                      .++||+|+.++|||+    +.+  ..++||+.+..-
T Consensus       192 ~~liHgDlh~~NvL~----~~~--~~~IDFdd~~~g  221 (325)
T d1zyla1         192 VLRLHGDCHAGNILW----RDG--PMFVDLDDARNG  221 (325)
T ss_dssp             CEECCSSCSGGGEEE----SSS--EEECCCTTCCEE
T ss_pred             ceeecCCCCcccEEE----eCC--ceEEechhcccC
Confidence            368999999999999    532  358999988643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.07  E-value=0.0013  Score=52.68  Aligned_cols=34  Identities=35%  Similarity=0.423  Sum_probs=24.2

Q ss_pred             CccccCCCCCeeeeCCC------------------------CCCccEEEeecCcceec
Q psy11822        173 LIHADLKPENIMLVDPV------------------------RQPYRVKVIDFGSASHV  206 (229)
Q Consensus       173 iiHrDlkp~Nil~~~~~------------------------~~~~~~kl~DFg~a~~~  206 (229)
                      ++|.|+.++||++....                        ..+..++++||..|..-
T Consensus       220 ~CHnDL~~~NiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n  277 (395)
T d1nw1a_         220 FCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYN  277 (395)
T ss_dssp             EECSCCCGGGEEEEC------------------------------CCEECCCTTCEEE
T ss_pred             EEecCCCcccEeeccccccccccccccccccccccccccccCCCCcEEEEeecccCCC
Confidence            57999999999985421                        23458999999998754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.65  E-value=0.0014  Score=50.61  Aligned_cols=31  Identities=35%  Similarity=0.447  Sum_probs=26.6

Q ss_pred             CCCccccCCCCCeeeeCCCCCCccEEEeecCccee
Q psy11822        171 LGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASH  205 (229)
Q Consensus       171 ~~iiHrDlkp~Nil~~~~~~~~~~~kl~DFg~a~~  205 (229)
                      .|+||+|+.++||++    +.+...-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~----~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFF----LGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEE----ETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhc----ccccceeEeccccccc
Confidence            469999999999999    6666678999999864