Query psy11826
Match_columns 83
No_of_seqs 107 out of 1833
Neff 12.2
Searched_HMMs 29240
Date Fri Aug 16 19:59:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_A Titin; IG-like, titin, 99.8 1.4E-19 4.7E-24 81.3 8.9 76 2-82 19-96 (100)
2 1wwb_X Protein (brain derived 99.8 2.7E-18 9.3E-23 77.4 12.6 82 2-83 15-96 (103)
3 1he7_A High affinity nerve gro 99.8 5.5E-18 1.9E-22 78.7 11.9 81 3-83 15-97 (126)
4 3knb_B Obscurin-like protein 1 99.8 4.7E-19 1.6E-23 80.5 8.0 76 2-82 27-102 (107)
5 1g1c_A Immunoglobulin-like dom 99.8 4.1E-17 1.4E-21 72.7 10.3 77 2-82 19-95 (99)
6 1wit_A Twitchin 18TH IGSF modu 99.8 5.3E-18 1.8E-22 75.0 6.9 74 2-82 16-91 (93)
7 3qp3_A Titin; I-SET IG-like, s 99.7 3.4E-17 1.2E-21 73.5 8.7 76 2-82 22-97 (103)
8 2cqv_A MLCK, myosin light chai 99.7 5.8E-17 2E-21 74.0 9.6 75 2-81 21-95 (114)
9 2bk8_A Connectin, M1, titin he 99.7 3E-16 1E-20 69.8 10.8 76 2-82 15-91 (97)
10 1u2h_A APEG-1, aortic preferen 99.7 1.2E-16 4E-21 71.3 9.3 77 2-82 19-95 (99)
11 2kdg_A Myotilin; immonoglobuli 99.7 6.3E-17 2.1E-21 72.3 8.4 77 2-82 19-95 (100)
12 2e7c_A Myosin-binding protein 99.7 1.9E-16 6.5E-21 72.7 9.9 75 2-82 38-112 (118)
13 3irg_A Titin; IG-like, titin, 99.7 1.1E-16 3.9E-21 71.3 8.9 76 2-82 19-96 (100)
14 1gxe_A Myosin binding protein 99.7 3.9E-17 1.3E-21 77.2 7.6 76 2-82 32-136 (139)
15 3puc_A Titin; I-SET IG-like do 99.7 1.3E-16 4.3E-21 71.1 8.7 76 2-82 20-95 (99)
16 1wwc_A Protein (NT-3 growth fa 99.7 9.4E-16 3.2E-20 70.4 11.5 78 4-82 21-98 (118)
17 2yr3_A Myosin light chain kina 99.7 3.2E-17 1.1E-21 73.2 6.1 72 2-81 25-96 (99)
18 2kkq_A Myotilin; unknown funct 99.7 4.4E-16 1.5E-20 71.4 9.5 77 2-82 29-106 (116)
19 2lu7_A Obscurin-like protein 1 99.7 2.4E-16 8.3E-21 68.7 7.7 65 2-72 10-74 (84)
20 3caf_A Fibroblast growth facto 99.7 5.7E-17 2E-21 72.4 5.6 77 2-82 22-98 (100)
21 3irg_B Obscurin-like protein 1 99.7 2.4E-16 8.1E-21 71.1 7.6 76 2-82 27-102 (107)
22 1fhg_A Telokin; immunoglobulin 99.7 6E-16 2E-20 74.0 9.4 76 2-81 55-130 (154)
23 1nct_A Titin; cell adhesion, g 99.7 4.3E-17 1.5E-21 73.8 5.1 76 2-82 28-103 (106)
24 2ckn_A Basic fibroblast growth 99.7 1.3E-16 4.6E-21 70.8 6.5 71 2-82 23-93 (95)
25 3cx2_A Myosin-binding protein 99.7 2.3E-15 7.9E-20 68.2 10.6 81 2-82 18-105 (108)
26 2dm2_A Palladin; beta-sandwich 99.7 3.2E-16 1.1E-20 71.1 7.7 75 2-80 22-97 (110)
27 3rbs_A Myomesin-1; immunoglobu 99.7 1.2E-15 4.1E-20 76.0 10.0 74 2-82 130-204 (207)
28 2edj_A Roundabout homolog 2; K 99.7 1.4E-16 4.8E-21 71.2 5.6 72 2-81 22-94 (100)
29 2cr3_A Basic fibroblast growth 99.7 5.6E-16 1.9E-20 69.3 7.5 71 2-82 17-87 (99)
30 3kvq_A Vascular endothelial gr 99.7 9.6E-17 3.3E-21 72.5 5.1 73 2-81 24-96 (108)
31 3bfo_A Mucosa-associated lymph 99.7 8.4E-16 2.9E-20 67.7 7.4 61 2-76 17-77 (91)
32 2lvc_A Obscurin-like protein 1 99.7 2.8E-16 9.4E-21 69.5 5.6 64 2-71 20-83 (91)
33 2yuz_A Myosin-binding protein 99.7 3.3E-15 1.1E-19 67.0 8.9 73 2-81 21-93 (100)
34 2dm3_A KIAA0992 protein, palla 99.6 1.4E-16 4.9E-21 72.2 3.9 76 2-81 23-98 (110)
35 4hwu_A Fibroblast growth facto 99.6 3.3E-15 1.1E-19 66.2 8.2 69 2-81 15-83 (95)
36 2dav_A SLOW MYBP-C, myosin-bin 99.6 5.8E-15 2E-19 68.6 9.1 81 2-82 21-108 (126)
37 2eo9_A Roundabout homolog 1; b 99.6 6E-16 2E-20 71.0 5.6 71 2-80 22-93 (118)
38 2r15_A Myomesin-1; sarcomeric 99.6 1.1E-14 3.9E-19 71.9 10.3 77 2-82 131-207 (212)
39 1gl4_B Basement membrane-speci 99.6 3.2E-15 1.1E-19 66.5 7.2 71 2-82 24-95 (98)
40 1waa_A Titin; metal binding pr 99.6 6.4E-15 2.2E-19 65.3 7.9 65 2-72 19-83 (93)
41 3mtr_A N-CAM-1, NCAM-1, neural 99.6 1.4E-14 4.6E-19 72.1 9.8 75 2-81 32-108 (215)
42 4fa8_A Secreted protein BARF1; 99.6 7.4E-15 2.5E-19 73.0 8.2 77 2-81 120-198 (203)
43 2cry_A KIN of IRRE-like protei 99.6 6E-16 2E-20 71.4 3.9 80 2-82 27-110 (122)
44 3so5_A LIG-3, leucine-rich rep 99.6 2.9E-14 9.8E-19 64.4 9.0 80 2-81 24-109 (112)
45 2edn_A Myosin-binding protein 99.6 1.3E-14 4.5E-19 66.8 7.7 81 2-82 26-113 (118)
46 3s35_X Vascular endothelial gr 99.6 8.5E-15 2.9E-19 67.4 7.0 78 2-81 22-106 (122)
47 1x44_A Myosin-binding protein 99.6 7.6E-14 2.6E-18 62.6 9.9 63 2-70 21-85 (103)
48 3kld_A Contactin 4, axcam, BIG 99.6 9.3E-15 3.2E-19 78.0 7.8 72 2-82 309-380 (384)
49 1itb_B Type 1 interleukin-1 re 99.6 8E-14 2.7E-18 72.5 10.8 81 2-82 223-311 (315)
50 3mjg_X Beta-type platelet-deri 99.6 4.2E-14 1.4E-18 72.8 9.6 81 2-82 195-275 (289)
51 2a38_A Titin; Z1Z2, structural 99.6 2.7E-14 9.1E-19 69.8 8.4 76 2-82 117-192 (194)
52 2ifg_A High affinity nerve gro 99.6 6.7E-14 2.3E-18 74.0 10.3 82 2-83 260-343 (347)
53 2rik_A Titin; I-SET IG fold, p 99.6 4E-14 1.4E-18 72.6 9.2 76 2-82 206-281 (284)
54 4fqp_A Poliovirus receptor; im 99.6 1.5E-14 5E-19 75.4 7.5 70 2-82 231-301 (313)
55 2wim_A N-CAM 2, NCAM2, neural 99.6 2.5E-14 8.5E-19 73.6 8.2 74 2-82 208-281 (291)
56 2v5t_A NCAM2, N-CAM 2, neural 99.6 1.3E-14 4.5E-19 70.6 6.8 74 2-82 112-185 (189)
57 2dlt_A Myosin binding protein 99.6 1.3E-14 4.5E-19 65.4 6.3 70 2-77 22-91 (106)
58 2ens_A Advanced glycosylation 99.6 2.7E-15 9.1E-20 66.6 3.8 59 2-74 24-82 (96)
59 2e6p_A Obscurin-like protein 1 99.6 4.7E-14 1.6E-18 63.3 8.0 67 2-74 24-90 (104)
60 3ejj_X Macrophage colony-stimu 99.6 3.2E-13 1.1E-17 69.4 12.0 78 2-82 200-278 (289)
61 2j8h_A Titin, connectin; cardi 99.6 2.5E-14 8.4E-19 70.1 7.5 76 2-82 118-194 (197)
62 2edf_A Obscurin; beta-sandwich 99.6 8.9E-14 3E-18 62.3 8.4 63 2-70 22-84 (103)
63 2y25_A Myomesin; structural pr 99.6 5.2E-14 1.8E-18 73.1 8.5 77 2-82 236-312 (317)
64 2v9t_A Roundabout homolog 1; s 99.6 3.7E-15 1.3E-19 68.2 3.8 75 2-77 23-100 (117)
65 2y23_A Myomesin; structural pr 99.6 9.1E-14 3.1E-18 72.0 9.2 74 2-82 235-309 (312)
66 2yuv_A Myosin-binding protein 99.6 1.5E-13 5.1E-18 61.3 8.7 61 2-68 22-82 (100)
67 2v5m_A Dscam; neurobiology SPL 99.6 7.2E-14 2.5E-18 74.3 8.9 66 2-82 321-386 (388)
68 2k1m_A Myosin-binding protein 99.5 8.4E-14 2.9E-18 61.7 7.5 61 2-68 22-82 (95)
69 3m45_A Cell adhesion molecule 99.5 3.6E-13 1.2E-17 60.5 9.7 75 2-81 20-102 (108)
70 2j8h_A Titin, connectin; cardi 99.5 3.2E-13 1.1E-17 66.1 9.9 76 2-81 18-94 (197)
71 3lcy_A Titin; A-BAND, IG tande 99.5 1.6E-13 5.5E-18 67.0 8.8 76 2-82 117-193 (197)
72 2wv3_A Neuroplastin; igcam, me 99.5 7.6E-13 2.6E-17 64.6 11.2 76 2-82 106-187 (190)
73 2cpc_A KIAA0657 protein; immun 99.5 6.7E-13 2.3E-17 60.3 10.2 63 2-70 27-89 (113)
74 1qz1_A Neural cell adhesion mo 99.5 4.1E-14 1.4E-18 72.8 6.7 74 2-82 210-287 (291)
75 3qr2_A Basigin; CD147, EMMPRIN 99.5 2E-14 7E-19 67.4 5.2 72 2-75 35-116 (137)
76 3lcy_A Titin; A-BAND, IG tande 99.5 4.5E-13 1.5E-17 65.5 10.1 75 2-81 21-95 (197)
77 2va4_A NCAM2, N-CAM 2, neural 99.5 3.6E-14 1.2E-18 69.2 6.2 76 2-82 108-190 (192)
78 1cs6_A Axonin-1; neural cell a 99.5 6.7E-14 2.3E-18 74.4 7.6 72 2-82 308-379 (382)
79 3b5h_A Cervical EMMPRIN, HAB18 99.5 5.2E-13 1.8E-17 64.9 10.1 76 2-82 97-180 (184)
80 3rbg_A Cytotoxic and regulator 99.5 4.7E-13 1.6E-17 61.9 9.4 75 2-81 15-97 (124)
81 2yd1_A Tyrosine-protein phosph 99.5 1.1E-12 3.8E-17 65.1 11.3 75 2-80 20-97 (212)
82 3laf_A Deleted in colorectal c 99.5 7.1E-14 2.4E-18 74.6 7.2 73 2-82 326-398 (403)
83 2nzi_A Titin; IG-domain, FNIII 99.5 5.3E-13 1.8E-17 69.1 10.1 76 2-81 18-94 (305)
84 3b43_A Titin; I-SET IG fold, e 99.5 2E-13 6.7E-18 76.1 8.9 75 2-81 398-472 (570)
85 3uto_A Twitchin; kinase, muscl 99.5 2.6E-13 9E-18 76.0 9.4 76 2-82 496-571 (573)
86 2o26_X MAST/stem cell growth f 99.5 4.8E-13 1.7E-17 68.9 9.8 79 2-82 202-285 (290)
87 2yd6_A PTPRD protein; hydrolas 99.5 8.5E-13 2.9E-17 65.5 10.3 76 2-81 20-96 (212)
88 4frw_A Poliovirus receptor-rel 99.5 2.9E-13 9.8E-18 66.8 8.5 75 2-80 132-206 (218)
89 2jll_A NCAM2, neural cell adhe 99.5 6.9E-14 2.4E-18 74.4 6.6 75 2-81 14-95 (389)
90 1pd6_A Cardiac MYBP-C;, myosin 99.5 2.3E-13 7.9E-18 61.3 7.3 64 2-71 30-94 (104)
91 2c5d_C AXL oncogene, tyrosine- 99.5 6E-13 2.1E-17 65.2 9.3 74 2-75 16-94 (195)
92 3s97_C Contactin-1; carbonic a 99.5 4.5E-14 1.5E-18 69.2 5.2 72 2-82 127-198 (201)
93 3grw_A Fibroblast growth facto 99.5 2.3E-12 7.7E-17 64.8 11.4 81 2-82 128-215 (241)
94 2yd6_A PTPRD protein; hydrolas 99.5 2.7E-13 9.1E-18 67.3 7.9 70 2-76 122-194 (212)
95 3rbs_A Myomesin-1; immunoglobu 99.5 8.4E-13 2.9E-17 65.7 9.6 68 1-71 15-83 (207)
96 2va4_A NCAM2, N-CAM 2, neural 99.5 1.8E-13 6.3E-18 66.7 7.2 73 2-81 18-90 (192)
97 2yd1_A Tyrosine-protein phosph 99.5 9.2E-14 3.1E-18 68.9 6.1 67 2-77 124-191 (212)
98 1bih_A Hemolin; insect immunit 99.5 2.2E-13 7.5E-18 72.5 7.8 71 2-82 323-393 (395)
99 2edk_A Myosin-binding protein 99.5 2.7E-14 9.3E-19 63.9 3.7 63 2-70 22-88 (101)
100 2a38_A Titin; Z1Z2, structural 99.5 2.4E-13 8.1E-18 66.4 7.2 74 2-80 19-94 (194)
101 2edh_A Obscurin; structural ge 99.5 8.6E-13 3E-17 60.0 8.6 60 2-68 33-92 (113)
102 2x1w_L Vascular endothelial gr 99.5 8.4E-13 2.9E-17 65.7 9.1 80 2-82 119-204 (213)
103 2id5_A Lingo-1, leucine rich r 99.5 1E-13 3.5E-18 75.8 6.1 76 2-82 399-474 (477)
104 3qs7_E FL cytokine receptor; i 99.5 8.9E-13 3E-17 71.5 9.7 75 1-81 61-135 (423)
105 2rik_A Titin; I-SET IG fold, p 99.5 7.7E-13 2.6E-17 67.9 9.1 75 2-81 19-93 (284)
106 3b43_A Titin; I-SET IG fold, e 99.5 8.3E-13 2.8E-17 73.6 9.7 76 2-82 491-567 (570)
107 3r4d_A CEA-related cell adhesi 99.5 3.5E-13 1.2E-17 66.5 7.5 73 2-82 124-197 (208)
108 3u83_A Poliovirus receptor-rel 99.5 2E-13 6.8E-18 71.4 6.8 70 2-82 246-317 (331)
109 3p3y_A Neurofascin; IG domains 99.5 4E-13 1.4E-17 71.7 8.0 75 2-82 326-400 (404)
110 2eny_A Obscurin; beta-sandwich 99.5 9.7E-14 3.3E-18 62.5 4.6 65 2-71 22-87 (104)
111 3dmk_A DOWN syndrome cell adhe 99.5 4.2E-12 1.4E-16 72.9 12.2 80 2-81 443-522 (816)
112 2ny1_B T-cell surface glycopro 99.5 3.8E-13 1.3E-17 65.5 6.9 65 2-81 111-175 (184)
113 1jbj_A CD3 epsilon and gamma e 99.5 1.3E-13 4.5E-18 67.5 5.3 59 2-75 121-179 (186)
114 1rhf_A Tyrosine-protein kinase 99.5 2.6E-12 8.8E-17 62.3 9.8 70 2-74 16-85 (182)
115 2ec8_A MAST/stem cell growth f 99.5 4.9E-13 1.7E-17 73.6 8.0 81 2-82 327-408 (524)
116 2e7b_A Obscurin; IG-like domai 99.5 4E-13 1.4E-17 60.2 6.3 63 2-70 22-84 (103)
117 3k0w_A Mucosa-associated lymph 99.5 4.6E-13 1.6E-17 66.8 7.1 59 2-74 132-190 (218)
118 2eo1_A OBSCN protein, cDNA FLJ 99.5 6.8E-13 2.3E-17 59.3 6.9 64 2-71 25-88 (102)
119 2dku_A KIAA1556 protein; beta- 99.5 9.5E-13 3.2E-17 58.9 7.4 60 2-67 22-81 (103)
120 2vr9_A Roundabout 1, ROBO; imm 99.5 8.4E-14 2.9E-18 69.2 4.2 77 2-78 122-199 (217)
121 2yd9_A Receptor-type tyrosine- 99.5 8.9E-13 3E-17 68.4 8.2 70 2-82 219-288 (304)
122 2cr6_A KIAA1556 protein, obscu 99.5 3.5E-14 1.2E-18 64.9 2.6 64 2-69 27-90 (115)
123 2iep_A Muscle-specific kinase 99.5 1.2E-13 4.2E-18 67.3 4.6 66 2-75 114-179 (192)
124 3oq3_B IFN-alpha/beta binding 99.4 2E-12 6.8E-17 67.9 9.4 80 2-82 242-327 (329)
125 2v9r_A Roundabout homolog 1; p 99.4 3.6E-13 1.2E-17 66.5 6.1 67 2-77 125-193 (212)
126 3ojm_B Fibroblast growth facto 99.4 2.3E-13 7.9E-18 67.9 5.4 76 2-81 33-108 (231)
127 1z9m_A GAPA225; nectin-like, I 99.4 8E-12 2.7E-16 59.1 10.3 75 2-81 52-134 (145)
128 3sbw_C Programmed cell death 1 99.4 5.9E-12 2E-16 62.6 10.3 78 2-82 130-208 (222)
129 2y25_A Myomesin; structural pr 99.4 1.8E-12 6.3E-17 67.3 8.7 73 2-81 20-93 (317)
130 2yd9_A Receptor-type tyrosine- 99.4 2.5E-12 8.5E-17 66.7 9.1 76 2-81 20-96 (304)
131 2xot_A Amphoterin-induced prot 99.4 7.3E-13 2.5E-17 70.6 7.2 71 2-82 260-334 (361)
132 3grw_A Fibroblast growth facto 99.4 4.3E-13 1.5E-17 67.4 5.9 76 2-81 29-104 (241)
133 2e6q_A Obscurin-like protein 1 99.4 5.3E-12 1.8E-16 57.6 8.9 62 2-70 22-93 (112)
134 2fbo_J V1V2;, variable region- 99.4 2.7E-13 9.2E-18 68.4 5.2 81 2-82 150-249 (250)
135 1epf_A NCAM, protein (neural c 99.4 8.2E-13 2.8E-17 64.4 6.7 66 2-75 114-181 (191)
136 2jll_A NCAM2, neural cell adhe 99.4 2.6E-12 9E-17 68.4 9.1 75 2-81 114-190 (389)
137 3ojm_B Fibroblast growth facto 99.4 1.3E-12 4.5E-17 65.2 7.2 80 2-81 132-217 (231)
138 2wv3_A Neuroplastin; igcam, me 99.4 1.6E-12 5.6E-17 63.4 7.3 68 3-81 18-87 (190)
139 3qs7_E FL cytokine receptor; i 99.4 1E-11 3.4E-16 67.5 11.0 70 2-71 241-312 (423)
140 2v44_A NCAM2, neural cell adhe 99.4 7.1E-13 2.4E-17 64.6 6.0 67 2-76 110-178 (189)
141 4i0k_A CD276 antigen; immunogl 99.4 5.8E-12 2E-16 62.7 9.3 78 2-82 124-203 (222)
142 1e07_A Carcinoembryonic antige 99.4 2E-12 6.9E-17 72.7 8.4 64 2-81 573-636 (642)
143 3qs9_E FL cytokine receptor; i 99.4 3E-13 1E-17 75.1 5.0 72 2-82 340-411 (527)
144 3sgj_C Human FCG3A receptor; r 99.4 4.3E-12 1.5E-16 63.0 8.6 65 2-81 21-86 (204)
145 1jbj_A CD3 epsilon and gamma e 99.4 8.2E-13 2.8E-17 64.7 5.9 61 2-78 13-74 (186)
146 2nzi_A Titin; IG-domain, FNIII 99.4 4.7E-12 1.6E-16 65.6 9.0 75 2-81 118-193 (305)
147 1dr9_A B7-1 (CD80), T lymphocy 99.4 8.3E-12 2.8E-16 61.4 9.4 77 2-81 120-197 (201)
148 1vca_A VCAM-D1,2, human vascul 99.4 4.3E-12 1.5E-16 62.9 8.2 72 2-81 15-86 (202)
149 1epf_A NCAM, protein (neural c 99.4 1.5E-11 5.3E-16 59.9 10.0 75 2-80 16-94 (191)
150 4fa8_A Secreted protein BARF1; 99.4 2.4E-12 8.2E-17 64.0 7.2 80 2-81 7-101 (203)
151 2r15_A Myomesin-1; sarcomeric 99.4 1.6E-11 5.4E-16 60.7 10.1 74 3-81 17-91 (212)
152 3bp6_B Programmed cell death 1 99.4 1.8E-12 6.1E-17 63.9 6.6 74 2-82 117-190 (202)
153 3mj8_L Stimulatory hamster ant 99.4 7.4E-13 2.5E-17 65.6 5.2 79 2-80 128-208 (213)
154 2c5d_C AXL oncogene, tyrosine- 99.4 2.4E-12 8.4E-17 63.0 7.0 68 2-81 120-189 (195)
155 2wng_A Tyrosine-protein phosph 99.4 1.5E-12 5.1E-17 68.2 6.4 74 2-75 234-309 (327)
156 3ry4_A Low affinity immunoglob 99.4 1.7E-12 5.7E-17 62.4 6.0 60 2-74 99-159 (170)
157 3jz7_A MCAR, CAR, coxsackievir 99.4 7.6E-13 2.6E-17 65.3 5.0 72 2-82 135-209 (214)
158 1xau_A B- and T-lymphocyte att 99.4 2.3E-11 7.9E-16 54.9 9.1 74 2-77 28-107 (122)
159 3kld_A Contactin 4, axcam, BIG 99.4 9.7E-13 3.3E-17 70.3 5.5 71 2-81 219-290 (384)
160 3k0w_A Mucosa-associated lymph 99.4 7.4E-12 2.5E-16 62.4 8.3 59 2-74 32-90 (218)
161 1f97_A Junction adhesion molec 99.4 1.9E-12 6.4E-17 63.9 6.1 72 2-75 118-195 (212)
162 3p3y_A Neurofascin; IG domains 99.4 1.7E-12 5.9E-17 69.2 6.3 72 2-81 236-307 (404)
163 3bp6_B Programmed cell death 1 99.4 3.1E-12 1.1E-16 63.0 6.8 78 2-81 16-99 (202)
164 2dm7_A KIAA1556 protein; beta- 99.4 4.8E-12 1.6E-16 57.0 6.9 63 2-71 22-84 (108)
165 1rhf_A Tyrosine-protein kinase 99.4 7.7E-12 2.6E-16 60.6 8.0 66 2-81 112-179 (182)
166 4f80_A Butyrophilin subfamily 99.4 4.2E-12 1.5E-16 63.5 7.2 78 2-82 132-210 (226)
167 1hng_A CD2; T lymphocyte adhes 99.4 1.1E-12 3.6E-17 63.9 4.8 61 5-81 112-172 (176)
168 2y23_A Myomesin; structural pr 99.4 4.9E-11 1.7E-15 61.8 11.2 72 2-76 121-193 (312)
169 1ugn_A LIR1, leukocyte immunog 99.4 2.4E-11 8.3E-16 59.7 9.6 68 2-73 114-181 (198)
170 2iep_A Muscle-specific kinase 99.4 4.8E-12 1.6E-16 61.7 6.8 66 2-74 21-87 (192)
171 4fom_A Poliovirus receptor-rel 99.4 1.6E-13 5.6E-18 71.2 1.6 70 2-81 226-296 (308)
172 1fnl_A Low affinity immunoglob 99.4 3E-12 1E-16 62.0 6.0 60 2-74 102-162 (175)
173 2ocw_A Polymeric-immunoglobuli 99.4 8.8E-12 3E-16 69.4 8.5 76 2-77 456-537 (585)
174 4dkd_C Macrophage colony-stimu 99.4 2.6E-11 9E-16 62.4 9.7 78 2-82 200-278 (292)
175 3sgj_C Human FCG3A receptor; r 99.4 2.1E-12 7.3E-17 64.1 5.4 59 2-73 102-161 (204)
176 1fnl_A Low affinity immunoglob 99.4 1.1E-11 3.7E-16 60.0 7.8 65 2-81 21-86 (175)
177 3v2a_R Vascular endothelial gr 99.4 6.8E-14 2.3E-18 79.6 0.0 73 2-81 680-752 (772)
178 2ec8_A MAST/stem cell growth f 99.4 3.1E-11 1.1E-15 66.6 10.4 78 2-81 225-305 (524)
179 1wio_A CD4, T-cell surface gly 99.4 4.2E-12 1.4E-16 67.3 6.8 80 2-81 190-289 (363)
180 1bih_A Hemolin; insect immunit 99.3 2.6E-12 8.9E-17 68.5 5.9 73 2-77 226-298 (395)
181 1sy6_A T-cell surface glycopro 99.3 1.6E-12 5.4E-17 64.6 4.6 64 2-74 127-192 (204)
182 3r08_E T-cell surface glycopro 99.3 4.3E-13 1.5E-17 58.0 2.2 53 2-70 13-66 (82)
183 2v44_A NCAM2, neural cell adhe 99.3 1.8E-11 6.3E-16 59.6 8.3 68 2-75 16-84 (189)
184 1f2q_A High affinity immunoglo 99.3 3.5E-12 1.2E-16 61.8 5.5 60 2-74 99-159 (176)
185 3oq3_B IFN-alpha/beta binding 99.3 7.5E-12 2.6E-16 65.7 7.0 64 2-74 142-209 (329)
186 3rjd_A High affinity immunoglo 99.3 2.8E-11 9.7E-16 61.4 8.9 64 2-80 15-79 (262)
187 1lk3_L 9D7 light chain; antige 99.3 3.9E-12 1.3E-16 63.0 5.5 74 2-75 125-202 (210)
188 2d3v_A Leukocyte immunoglobuli 99.3 1.1E-11 3.7E-16 61.0 7.0 68 2-73 113-180 (196)
189 3qs9_E FL cytokine receptor; i 99.3 3.7E-11 1.3E-15 66.9 9.6 70 2-71 241-312 (527)
190 4gos_A V-SET domain-containing 99.3 4.5E-12 1.5E-16 58.8 5.2 79 2-82 19-117 (125)
191 3zyj_A Leucine-rich repeat-con 99.3 9.4E-12 3.2E-16 67.7 7.2 71 2-81 355-429 (440)
192 3d9a_L Light chain of hyhel10 99.3 3.7E-12 1.3E-16 63.1 5.1 73 3-75 127-203 (213)
193 3p2t_A Leukocyte immunoglobuli 99.3 6.9E-12 2.4E-16 61.6 6.0 65 2-73 18-82 (196)
194 1qz1_A Neural cell adhesion mo 99.3 8E-11 2.7E-15 60.6 10.1 69 2-74 16-87 (291)
195 2xzc_L FAB A.17 light chain; i 99.3 9.6E-12 3.3E-16 61.8 6.5 73 3-75 129-205 (216)
196 2rcj_C Light chain; immunoglob 99.3 1.9E-11 6.4E-16 67.4 8.1 74 2-75 333-410 (523)
197 4dep_C Interleukin-1 receptor 99.3 6.9E-13 2.4E-17 69.8 2.3 80 2-81 240-329 (349)
198 1q0x_L FAB 9B1, light chain; a 99.3 1.6E-11 5.6E-16 60.8 6.8 78 2-79 129-209 (212)
199 3laf_A Deleted in colorectal c 99.3 8.8E-12 3E-16 66.6 6.2 72 2-81 235-307 (403)
200 3zyi_A Leucine-rich repeat-con 99.3 8.1E-12 2.8E-16 68.2 6.1 71 2-82 366-440 (452)
201 1f2q_A High affinity immunoglo 99.3 1.7E-11 5.8E-16 59.3 6.5 65 2-81 18-83 (176)
202 1ry7_B FGFR-3, fibroblast grow 99.3 2.1E-12 7E-17 67.7 3.5 81 2-82 236-324 (334)
203 3s96_B 3B5H10 FAB light chain; 99.3 6.6E-12 2.3E-16 62.3 5.2 78 3-80 136-215 (218)
204 1hng_A CD2; T lymphocyte adhes 99.3 3.1E-12 1E-16 62.2 3.7 66 2-75 10-87 (176)
205 2rgs_A I, IG gamma-2B heavy ch 99.3 3.8E-12 1.3E-16 63.7 4.0 73 2-74 25-101 (218)
206 4f80_A Butyrophilin subfamily 99.3 1.4E-11 4.8E-16 61.6 6.1 80 2-81 18-115 (226)
207 3eow_R Poliovirus receptor; im 99.3 2E-11 7E-16 60.8 6.5 80 2-83 129-210 (221)
208 3ry4_A Low affinity immunoglob 99.3 5.1E-11 1.8E-15 57.2 7.7 65 2-81 18-83 (170)
209 3p2t_A Leukocyte immunoglobuli 99.3 3.7E-11 1.3E-15 59.0 7.2 67 2-73 113-179 (196)
210 1ry7_B FGFR-3, fibroblast grow 99.3 1.5E-12 5.1E-17 68.2 2.3 76 2-81 137-212 (334)
211 1nbq_A JAM, junctional adhesio 99.3 1.5E-12 5.1E-17 64.1 2.2 74 2-75 121-197 (209)
212 2vr9_A Roundabout 1, ROBO; imm 99.3 1.4E-11 4.9E-16 61.1 5.6 73 2-75 23-95 (217)
213 4hwn_A FC receptor-like A; FCR 99.3 4.6E-11 1.6E-15 54.1 6.7 59 2-73 21-84 (108)
214 1jhl_L IGG1-kappa D11.15 FV (l 99.3 9E-11 3.1E-15 52.9 7.6 66 2-72 15-94 (108)
215 4dep_C Interleukin-1 receptor 99.3 3.6E-11 1.2E-15 63.4 7.1 62 2-72 134-200 (349)
216 1gsm_A Madcam-1, mucosal addre 99.3 5.2E-11 1.8E-15 59.7 7.2 69 2-81 21-91 (210)
217 3tv3_L PGT128 light chain, IG 99.3 5.6E-12 1.9E-16 62.4 3.8 78 3-80 126-206 (211)
218 1q9r_B S25-2 FAB (IGG1K) heavy 99.3 4.5E-11 1.5E-15 59.7 7.1 75 2-79 141-217 (222)
219 2aw2_A B and T lymphocyte atte 99.3 4.2E-11 1.5E-15 53.6 6.1 72 2-77 25-101 (120)
220 1pz5_B Heavy chain of FAB (SYA 99.3 9.3E-12 3.2E-16 62.1 4.4 77 2-83 139-219 (220)
221 2v5t_A NCAM2, N-CAM 2, neural 99.3 3.5E-11 1.2E-15 58.4 6.4 65 2-74 16-82 (189)
222 3rjd_A High affinity immunoglo 99.3 4.1E-11 1.4E-15 60.8 6.8 66 2-80 96-162 (262)
223 1f97_A Junction adhesion molec 99.2 1.6E-11 5.5E-16 60.5 5.0 63 2-73 15-89 (212)
224 1pko_A Myelin oligodendrocyte 99.2 7.1E-11 2.4E-15 55.4 7.0 78 2-81 20-117 (139)
225 2vol_A Murine IGG FC; FC, zinc 99.2 1.5E-11 5.1E-16 61.0 4.8 74 1-74 16-93 (207)
226 2c1o_A IGK-C protein; FAB frag 99.2 1.2E-11 4.2E-16 62.8 4.6 73 3-75 169-245 (254)
227 1igt_B IGG2A intact antibody - 99.2 3.3E-11 1.1E-15 65.4 6.5 74 2-75 254-331 (444)
228 1cs6_A Axonin-1; neural cell a 99.2 1.8E-11 6.3E-16 65.1 5.4 69 2-81 221-289 (382)
229 3o4o_C Interleukin-1 receptor 99.2 2.3E-12 7.7E-17 67.7 1.9 80 2-81 240-331 (339)
230 1nfd_E H57 FAB; complex (immun 99.2 8.9E-13 3.1E-17 65.3 0.3 75 3-77 128-204 (212)
231 2pet_A Lutheran blood group gl 99.2 1.2E-10 4.1E-15 58.2 7.9 70 2-71 132-211 (231)
232 3sob_L Antibody light chain; b 99.2 2.8E-11 9.5E-16 60.7 5.5 73 3-75 150-226 (237)
233 2zg1_A Sialic acid-binding IG- 99.2 4.8E-11 1.6E-15 59.1 6.3 70 2-82 137-212 (214)
234 2rcj_C Light chain; immunoglob 99.2 1.3E-10 4.3E-15 64.2 8.5 76 2-79 233-310 (523)
235 2if7_A SLAM family member 6; N 99.2 2.1E-10 7E-15 56.4 8.4 61 5-81 126-188 (193)
236 2wng_A Tyrosine-protein phosph 99.2 9.9E-11 3.4E-15 61.3 7.6 73 2-74 131-205 (327)
237 1i1c_A IGG2A, IG gamma-2A chai 99.2 1.9E-11 6.4E-16 62.1 4.7 73 2-74 31-107 (239)
238 2v5m_A Dscam; neurobiology SPL 99.2 3.4E-11 1.2E-15 64.1 5.9 71 2-81 226-302 (388)
239 1e07_A Carcinoembryonic antige 99.2 7.4E-11 2.5E-15 66.4 7.4 59 2-76 395-453 (642)
240 1c1e_H Catalytic antibody 1E9 99.2 3.5E-11 1.2E-15 59.9 5.4 76 2-80 138-215 (219)
241 2gi7_A GPVI protein; IG-like d 99.2 4.3E-11 1.5E-15 58.4 5.6 56 2-73 21-76 (184)
242 3dmk_A DOWN syndrome cell adhe 99.2 2.1E-10 7.2E-15 66.1 9.1 76 2-81 633-709 (816)
243 2vol_A Murine IGG FC; FC, zinc 99.2 4.7E-11 1.6E-15 59.2 5.6 73 2-74 123-197 (207)
244 2oz4_A Intercellular adhesion 99.2 1.5E-11 5.2E-16 62.8 4.0 63 2-82 199-261 (265)
245 2v9r_A Roundabout homolog 1; p 99.2 2.3E-11 7.7E-16 60.0 4.5 74 2-75 23-98 (212)
246 3nl4_L Antigen binding fragmen 99.2 6.1E-11 2.1E-15 58.7 6.0 68 2-69 128-198 (213)
247 2j6e_L IGM, FAB light chain; a 99.2 1.5E-11 5E-16 61.7 3.7 77 3-79 150-229 (234)
248 1dee_B IGM RF 2A2; FAB-IBP com 99.2 3.8E-10 1.3E-14 56.5 8.8 77 2-79 140-221 (223)
249 2d3v_A Leukocyte immunoglobuli 99.2 5.3E-11 1.8E-15 58.5 5.6 65 2-73 18-82 (196)
250 1z7z_I Intercellular adhesion 99.2 1.6E-11 5.4E-16 66.6 3.8 63 2-82 384-446 (450)
251 3udw_C Poliovirus receptor; PV 99.2 5.8E-11 2E-15 53.9 5.2 80 2-81 14-112 (118)
252 3o4o_C Interleukin-1 receptor 99.2 9.7E-12 3.3E-16 65.3 2.8 73 2-81 32-113 (339)
253 1wio_A CD4, T-cell surface gly 99.2 3.7E-11 1.3E-15 63.7 5.0 61 2-77 110-170 (363)
254 2gi7_A GPVI protein; IG-like d 99.2 8.7E-11 3E-15 57.3 5.9 62 2-73 107-168 (184)
255 3mj8_L Stimulatory hamster ant 99.2 3.4E-10 1.2E-14 56.0 8.1 67 2-73 14-94 (213)
256 3pv7_A B7-H6, IG-like domain-c 99.2 2.6E-10 8.8E-15 57.7 7.8 73 3-75 133-214 (248)
257 2ywz_A NEW antigen receptor va 99.2 5E-10 1.7E-14 50.8 8.0 66 2-70 14-87 (111)
258 3d9a_L Light chain of hyhel10 99.2 5.2E-10 1.8E-14 55.4 8.7 68 2-74 15-96 (213)
259 2vsd_A CHIR AB1; immune system 99.2 2.3E-10 7.7E-15 51.5 6.7 62 2-72 18-79 (105)
260 3mj6_A Junctional adhesion mol 99.2 7.7E-11 2.6E-15 60.1 5.6 80 2-81 132-233 (268)
261 1itb_B Type 1 interleukin-1 re 99.2 1.1E-10 3.9E-15 60.7 6.3 65 2-75 117-189 (315)
262 3d9a_H Heavy chain of hyhel10 99.2 4.4E-11 1.5E-15 59.3 4.5 74 2-78 132-207 (210)
263 2p1y_A Bispecific alpha/beta T 99.2 3.6E-10 1.2E-14 56.8 7.9 68 2-72 141-222 (238)
264 2rgs_A I, IG gamma-2B heavy ch 99.2 4.9E-11 1.7E-15 59.6 4.7 73 2-74 131-205 (218)
265 1z7z_I Intercellular adhesion 99.2 2.7E-10 9.4E-15 61.8 7.8 65 2-74 100-167 (450)
266 2wqr_A IG epsilon chain C regi 99.2 2.4E-10 8.1E-15 59.9 7.3 74 4-77 25-100 (323)
267 3r06_A Anti-mouse CD3epsilon a 99.2 7.9E-11 2.7E-15 58.3 5.2 73 2-74 126-202 (213)
268 2wim_A N-CAM 2, NCAM2, neural 99.2 2.9E-10 1E-14 58.5 7.5 68 2-75 18-86 (291)
269 3b5h_A Cervical EMMPRIN, HAB18 99.2 4.3E-10 1.5E-14 54.5 7.6 58 2-71 12-71 (184)
270 1h5b_A Murine T cell receptor 99.2 2E-10 6.9E-15 52.2 6.1 68 2-73 15-95 (113)
271 3s97_C Contactin-1; carbonic a 99.2 3.1E-11 1.1E-15 59.1 3.5 69 2-75 22-92 (201)
272 2ifg_A High affinity nerve gro 99.1 5E-11 1.7E-15 63.1 4.3 73 2-81 172-245 (347)
273 1uct_A Immunoglobulin alpha FC 99.1 5.3E-11 1.8E-15 59.7 4.2 61 2-71 119-179 (218)
274 4dzb_B Vbeta2 (MAIT T cell rec 99.1 1.6E-09 5.5E-14 54.8 9.6 67 2-72 15-100 (246)
275 1ccz_A Protein (CD58); LFA-3, 99.1 1.8E-10 6.2E-15 55.8 5.9 72 2-74 9-85 (171)
276 2qsq_A Carcinoembryonic antige 99.1 1.1E-10 3.6E-15 53.2 4.8 80 2-81 14-105 (111)
277 1eaj_A Coxsackie virus and ade 99.1 4.9E-11 1.7E-15 54.6 3.7 79 2-82 19-122 (126)
278 1dn0_B IGM-kappa cold agglutin 99.1 1.1E-09 3.6E-14 55.3 8.8 78 2-80 139-222 (232)
279 1lk3_L 9D7 light chain; antige 99.1 1.1E-09 3.8E-14 54.2 8.7 69 1-74 13-95 (210)
280 3nl4_L Antigen binding fragmen 99.1 7.5E-10 2.6E-14 54.8 8.1 67 2-73 15-95 (213)
281 1l6x_A Immunoglobulin gamma-1 99.1 1.2E-10 4E-15 57.8 5.1 74 2-75 17-94 (207)
282 2fbj_H IGA-kappa J539 FAB (hea 99.1 1.2E-10 4.1E-15 58.2 5.1 74 2-76 136-212 (220)
283 3sbw_C Programmed cell death 1 99.1 2.6E-10 8.9E-15 56.7 6.3 76 2-80 15-110 (222)
284 3bkj_L WO2 IGG2A FAB fragment 99.1 6.6E-11 2.3E-15 60.1 4.2 72 3-74 165-240 (252)
285 2w59_A IGY FCU3-4; immunoglobu 99.1 1.1E-10 3.6E-15 58.9 4.9 72 2-74 27-102 (231)
286 3mjg_X Beta-type platelet-deri 99.1 1.3E-09 4.3E-14 56.1 9.0 63 2-74 14-76 (289)
287 2coq_A NEW antigen receptor va 99.1 8.3E-10 2.8E-14 49.8 7.4 66 2-70 14-87 (108)
288 2ghw_B Anti-SARS SCFV antibody 99.1 6.4E-10 2.2E-14 56.2 7.7 66 2-72 149-228 (247)
289 3v2a_R Vascular endothelial gr 99.1 1.8E-09 6.2E-14 61.8 10.1 80 2-81 238-322 (772)
290 1qgc_4 Protein (immunoglobulin 99.1 2.3E-10 7.8E-15 61.8 6.2 73 3-75 131-207 (438)
291 1l6x_A Immunoglobulin gamma-1 99.1 9.9E-11 3.4E-15 58.0 4.4 72 3-74 124-197 (207)
292 1uct_A Immunoglobulin alpha FC 99.1 1E-10 3.6E-15 58.6 4.5 65 2-73 22-88 (218)
293 4gjt_B Poliovirus receptor-rel 99.1 4.4E-10 1.5E-14 51.8 6.3 80 1-82 13-114 (123)
294 3khq_A B-cell antigen receptor 99.1 1.1E-09 3.9E-14 51.2 7.7 65 2-73 31-101 (133)
295 1qfw_M FV, antibody (anti beta 99.1 1.8E-09 6.3E-14 48.6 8.2 65 2-71 15-93 (108)
296 2oyp_A Hepatitis A virus cellu 99.1 2.9E-10 9.9E-15 51.1 5.6 78 2-79 8-102 (109)
297 2x1w_L Vascular endothelial gr 99.1 1.3E-10 4.4E-15 57.8 4.7 63 2-73 21-88 (213)
298 1nbq_A JAM, junctional adhesio 99.1 5.8E-11 2E-15 58.4 3.4 72 2-73 18-92 (209)
299 3s96_B 3B5H10 FAB light chain; 99.1 1.2E-09 4.3E-14 54.1 8.2 67 2-73 14-99 (218)
300 3r06_A Anti-mouse CD3epsilon a 99.1 1.5E-09 5E-14 53.8 8.3 67 2-73 15-95 (213)
301 3u83_A Poliovirus receptor-rel 99.1 1.5E-09 5.1E-14 56.8 8.7 75 4-81 151-226 (331)
302 2if7_A SLAM family member 6; N 99.1 3E-10 1E-14 55.9 5.8 80 2-81 12-102 (193)
303 4fqp_A Poliovirus receptor; im 99.1 3.7E-10 1.3E-14 58.8 6.4 80 2-81 14-112 (313)
304 3jz7_A MCAR, CAR, coxsackievir 99.1 1.6E-10 5.5E-15 56.9 4.8 78 2-81 14-116 (214)
305 2q20_A VK1 O18/O8 germline lig 99.1 3.8E-09 1.3E-13 47.7 9.0 65 2-71 17-95 (109)
306 2ocw_A Polymeric-immunoglobuli 99.1 1.5E-09 5.3E-14 60.5 9.1 77 2-81 14-107 (585)
307 1oll_A NK receptor; immune sys 99.1 2.3E-10 8E-15 55.9 5.2 61 2-72 112-172 (188)
308 3bqu_C 3H6 FAB light chain; be 99.1 2.1E-11 7.1E-16 61.2 1.5 72 3-74 149-224 (233)
309 1f3r_B FV antibody fragment; I 99.1 5.1E-10 1.8E-14 57.1 6.6 66 2-72 153-232 (257)
310 1f3r_B FV antibody fragment; I 99.1 1.3E-09 4.5E-14 55.6 8.0 69 2-73 14-102 (257)
311 1ugn_A LIR1, leukocyte immunog 99.1 2.6E-10 8.8E-15 56.1 5.2 64 2-72 18-81 (198)
312 1zox_A CLM-1; IG-superfamily, 99.1 3.1E-09 1E-13 48.2 8.3 77 2-81 15-106 (113)
313 1op3_H FAB 2G12, heavy chain; 99.1 1.2E-10 4E-15 58.4 3.8 73 2-76 142-216 (225)
314 3bae_H WO2 IGG2A FAB fragment 99.1 4.4E-10 1.5E-14 56.4 5.9 75 2-79 144-220 (228)
315 1oll_A NK receptor; immune sys 99.1 1.3E-09 4.5E-14 53.3 7.5 65 2-73 17-81 (188)
316 4fmk_A Poliovirus receptor-rel 99.1 2.1E-10 7.1E-15 56.8 4.6 74 2-75 15-109 (225)
317 3tv3_L PGT128 light chain, IG 99.1 1.4E-09 4.9E-14 53.8 7.6 65 2-73 14-92 (211)
318 3r0n_A Poliovirus receptor-rel 99.1 3.7E-10 1.3E-14 52.2 5.1 81 2-82 16-127 (128)
319 3moq_A NEW antigen receptor va 99.1 3.6E-09 1.2E-13 49.2 8.4 69 2-73 14-90 (126)
320 1vca_A VCAM-D1,2, human vascul 99.1 9.6E-10 3.3E-14 54.5 6.9 72 2-74 105-179 (202)
321 1qgc_4 Protein (immunoglobulin 99.1 4.3E-11 1.5E-15 64.6 2.2 77 2-81 357-435 (438)
322 3vh8_G Killer cell immunoglobu 99.1 6.3E-09 2.1E-13 54.3 10.1 68 2-74 132-199 (316)
323 1nkr_A P58-CL42 KIR; inhibitor 99.1 3.8E-09 1.3E-13 52.1 8.9 63 2-71 121-183 (201)
324 1sy6_A T-cell surface glycopro 99.1 1.7E-10 5.9E-15 57.3 4.0 55 2-71 17-71 (204)
325 2v5y_A Receptor-type tyrosine- 99.1 1.1E-09 3.7E-14 62.8 7.7 68 2-74 178-248 (731)
326 2wqr_A IG epsilon chain C regi 99.1 3.4E-10 1.1E-14 59.3 5.3 72 2-74 127-203 (323)
327 1nkr_A P58-CL42 KIR; inhibitor 99.1 1.4E-09 4.6E-14 53.7 7.2 65 2-71 21-85 (201)
328 3sob_L Antibody light chain; b 99.1 2.9E-09 9.9E-14 53.4 8.5 67 2-73 38-118 (237)
329 1q0x_L FAB 9B1, light chain; a 99.1 1.8E-09 6E-14 53.5 7.6 68 1-73 13-97 (212)
330 1i8k_A Epidermal growth factor 99.1 2.4E-09 8.1E-14 48.2 7.4 65 2-71 15-93 (107)
331 1hnf_A CD2; T lymphocyte adhes 99.1 1.5E-10 5.3E-15 56.7 3.7 66 2-75 13-92 (182)
332 3esu_F Antibody 14B7* light ch 99.1 1.2E-09 4E-14 55.4 7.0 66 2-70 145-231 (250)
333 1za6_B IGG heavy chain; immuno 99.1 1.9E-09 6.6E-14 56.9 8.1 70 1-73 13-103 (344)
334 1mqk_L Antibody 7E2 FV fragmen 99.1 2.4E-09 8.1E-14 49.2 7.4 65 2-71 15-93 (120)
335 3m8o_H Immunoglobulin A1 heavy 99.1 3.2E-10 1.1E-14 56.6 4.8 75 2-76 137-214 (221)
336 1sq2_N Novel antigen receptor; 99.1 4.4E-09 1.5E-13 47.8 8.2 66 2-70 14-87 (113)
337 2c1o_A IGK-C protein; FAB frag 99.1 2.9E-09 1E-13 54.0 8.3 67 2-73 52-137 (254)
338 2pet_A Lutheran blood group gl 99.1 9.6E-10 3.3E-14 54.9 6.4 76 2-81 14-110 (231)
339 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 2E-09 6.7E-14 54.9 7.6 69 2-73 17-100 (256)
340 1c1e_H Catalytic antibody 1E9 99.1 1.6E-09 5.5E-14 53.9 7.2 68 2-72 14-102 (219)
341 3ux9_B SCFV antibody; five hel 99.0 4.3E-09 1.5E-13 53.5 8.6 67 2-71 148-235 (256)
342 1dr9_A B7-1 (CD80), T lymphocy 99.0 4.7E-10 1.6E-14 55.1 4.9 73 2-74 8-90 (201)
343 2ny1_B T-cell surface glycopro 99.0 7.1E-10 2.4E-14 53.9 5.5 72 2-73 9-92 (184)
344 2or8_A Hepatitis A virus cellu 99.0 4.7E-10 1.6E-14 51.0 4.6 73 2-74 11-98 (116)
345 2oz4_A Intercellular adhesion 99.0 1.3E-09 4.3E-14 55.7 6.5 69 2-81 17-93 (265)
346 2q87_A CMRF35-H antigen; all-b 99.0 7E-09 2.4E-13 46.8 8.4 68 2-72 10-91 (110)
347 2e27_L Anti-ciguatoxin antibod 99.0 1.2E-09 4E-14 50.2 5.7 65 2-71 17-95 (119)
348 3esu_F Antibody 14B7* light ch 99.0 2.4E-09 8.1E-14 54.2 7.3 67 2-73 18-98 (250)
349 4dzb_B Vbeta2 (MAIT T cell rec 99.0 3.8E-10 1.3E-14 57.0 4.4 72 3-74 140-220 (246)
350 4fmk_A Poliovirus receptor-rel 99.0 2.2E-09 7.5E-14 53.1 7.1 72 3-76 136-208 (225)
351 1mju_H Immunoglobulin MS6-12; 99.0 4.2E-10 1.4E-14 56.5 4.5 74 2-78 135-210 (227)
352 3r4d_A CEA-related cell adhesi 99.0 7.7E-10 2.6E-14 54.5 5.3 71 2-72 13-94 (208)
353 4fom_A Poliovirus receptor-rel 99.0 1.8E-09 6.1E-14 56.1 6.9 70 2-75 128-198 (308)
354 2fbo_J V1V2;, variable region- 99.0 2.7E-10 9.2E-15 57.5 3.7 73 2-74 16-115 (250)
355 2ghw_B Anti-SARS SCFV antibody 99.0 2.3E-09 7.8E-14 54.2 7.0 67 2-71 16-103 (247)
356 1ccz_A Protein (CD58); LFA-3, 99.0 7.3E-10 2.5E-14 53.7 4.9 59 7-81 109-167 (171)
357 3bkj_L WO2 IGG2A FAB fragment 99.0 6.4E-09 2.2E-13 52.8 8.6 67 2-73 48-133 (252)
358 1hnf_A CD2; T lymphocyte adhes 99.0 1.8E-09 6E-14 53.0 6.3 59 5-79 117-175 (182)
359 3omz_A Human vdelta1 gamma del 99.0 5.4E-10 1.8E-14 57.0 4.6 72 2-73 16-103 (259)
360 1nqb_A Single-chain antibody f 99.0 6.4E-09 2.2E-13 53.1 8.5 69 2-73 14-103 (256)
361 3pv7_A B7-H6, IG-like domain-c 99.0 2.6E-10 8.9E-15 57.7 3.4 80 2-81 17-114 (248)
362 3auv_A SC-DSFV derived from th 99.0 7.4E-09 2.5E-13 53.3 8.7 67 2-73 26-106 (276)
363 1ncn_A T lymphocyte activation 99.0 2.8E-09 9.7E-14 48.1 6.4 75 2-76 8-96 (110)
364 3d9a_H Heavy chain of hyhel10 99.0 3.6E-09 1.2E-13 52.4 7.2 68 1-71 13-100 (210)
365 1pew_A JTO2, A lambda-6 type i 99.0 3.2E-09 1.1E-13 47.9 6.5 67 2-71 14-94 (109)
366 1i3g_L Antibody FV fragment; a 99.0 1.4E-08 4.9E-13 45.9 8.6 65 2-71 18-96 (111)
367 2jju_A Signal regulatory prote 99.0 8.6E-10 2.9E-14 51.1 4.6 70 2-71 17-96 (127)
368 3nfj_J T cell receptor beta ch 99.0 6.8E-09 2.3E-13 52.5 8.2 65 2-70 15-95 (245)
369 1i1c_A IGG2A, IG gamma-2A chai 99.0 7E-10 2.4E-14 56.3 4.6 72 3-74 138-211 (239)
370 3umt_A SCFV heavy chain and li 99.0 2.5E-09 8.5E-14 54.4 6.6 66 2-72 152-231 (256)
371 1nqb_A Single-chain antibody f 99.0 3.7E-09 1.3E-13 54.0 7.3 66 2-72 135-219 (256)
372 2znx_A SCFV; fluorotryptohpan, 99.0 5.1E-09 1.7E-13 53.0 7.7 67 2-71 136-222 (242)
373 3q0h_A T cell immunoreceptor w 99.0 9E-10 3.1E-14 50.4 4.5 79 2-81 17-104 (117)
374 1iga_A IGA1; immunoglobulin; N 99.0 2.6E-09 8.8E-14 58.6 7.0 72 2-75 261-335 (475)
375 3auv_A SC-DSFV derived from th 99.0 5.4E-09 1.9E-13 53.8 7.9 67 2-71 148-235 (276)
376 2dru_A Chimera of CD48 antigen 99.0 9.6E-10 3.3E-14 53.7 4.8 60 4-80 116-176 (180)
377 1moe_A Anti-CEA MAB T84.66; an 99.0 4.5E-09 1.6E-13 52.9 7.4 67 2-73 15-99 (240)
378 3ejj_X Macrophage colony-stimu 99.0 8E-10 2.7E-14 56.8 4.7 66 2-75 103-171 (289)
379 1zvo_C Myeloma immunoglobulin 99.0 4.4E-09 1.5E-13 58.4 7.8 73 2-74 311-386 (512)
380 1hzh_H IGG, immunoglobulin hea 99.0 1.1E-09 3.8E-14 59.7 5.4 73 2-74 263-339 (457)
381 1hzh_H IGG, immunoglobulin hea 99.0 6.3E-10 2.2E-14 60.7 4.3 72 3-74 370-443 (457)
382 2d9q_B Granulocyte colony-stim 99.0 2.5E-09 8.5E-14 56.0 6.4 69 1-74 13-86 (313)
383 3uzq_A Anti-dengue MAB 4E11; d 99.0 7.5E-09 2.6E-13 52.6 8.0 69 2-73 15-104 (253)
384 2aty_A Complement receptor chi 99.0 4.6E-09 1.6E-13 56.4 7.5 73 2-74 182-258 (376)
385 3liz_H 4C3 monoclonal antibody 99.0 1.2E-09 4.1E-14 55.7 4.9 75 2-79 138-214 (253)
386 3mj6_A Junctional adhesion mol 99.0 5.6E-10 1.9E-14 56.9 3.7 73 2-74 19-109 (268)
387 2znx_A SCFV; fluorotryptohpan, 99.0 7.4E-09 2.5E-13 52.4 7.8 67 2-73 15-95 (242)
388 3gkz_A Anti-methamphetamine si 99.0 2.2E-08 7.5E-13 51.0 9.4 67 2-71 22-108 (257)
389 3uzq_A Anti-dengue MAB 4E11; d 99.0 2.1E-09 7.1E-14 54.7 5.5 66 2-72 147-230 (253)
390 2yz1_A Tyrosine-protein phosph 99.0 1.2E-09 4.2E-14 50.0 4.2 71 2-72 21-101 (120)
391 1i1r_A GP130, interleukin-6 re 99.0 1.3E-08 4.6E-13 53.0 8.6 62 2-71 18-86 (303)
392 2w59_A IGY FCU3-4; immunoglobu 99.0 1.5E-09 5.2E-14 54.7 4.9 72 3-74 133-217 (231)
393 4frw_A Poliovirus receptor-rel 99.0 1.8E-09 6.2E-14 53.1 5.0 73 2-74 13-104 (218)
394 1qok_A MFE-23 recombinant anti 99.0 4.8E-09 1.6E-13 54.2 6.7 65 2-72 176-254 (282)
395 1lk2_B Beta-2-microglobulin; c 99.0 3.2E-08 1.1E-12 44.1 8.6 68 3-73 18-87 (99)
396 3eow_R Poliovirus receptor; im 99.0 5.3E-10 1.8E-14 55.7 3.0 76 2-77 13-107 (221)
397 1ow0_A IG alpha-1 chain C regi 98.9 1.4E-09 4.8E-14 54.2 4.5 72 2-73 121-199 (214)
398 3juy_B 3B3 single chain varian 98.9 6.7E-09 2.3E-13 52.9 7.1 67 2-73 163-244 (256)
399 3q5y_A TCR N15 beta; IG, T cel 98.9 4.1E-09 1.4E-13 53.1 6.2 71 3-73 137-212 (240)
400 1za6_B IGG heavy chain; immuno 98.9 6.2E-10 2.1E-14 58.8 3.3 71 3-73 257-329 (344)
401 1qok_A MFE-23 recombinant anti 98.9 5.9E-09 2E-13 53.9 6.8 69 2-73 40-129 (282)
402 4acp_A IG gamma-1 chain C regi 98.9 1.8E-09 6.1E-14 55.0 4.7 73 2-74 38-114 (240)
403 2jjs_C Leukocyte surface antig 98.9 2.3E-09 7.8E-14 49.8 4.7 81 2-82 15-112 (127)
404 1j05_L T84.66 antibody, anti-C 98.9 7.4E-09 2.5E-13 46.8 6.4 65 2-71 15-97 (111)
405 1xt5_A Variable region-contain 98.9 6.6E-09 2.3E-13 48.3 6.3 71 2-72 18-115 (135)
406 2aty_A Complement receptor chi 98.9 4.6E-09 1.6E-13 56.4 6.5 72 2-73 288-361 (376)
407 2o26_X MAST/stem cell growth f 98.9 9.5E-10 3.2E-14 56.7 3.7 64 2-74 105-171 (290)
408 3o3u_N Maltose-binding peripla 98.9 3.9E-10 1.4E-14 63.0 2.4 72 2-81 380-465 (581)
409 1moe_A Anti-CEA MAB T84.66; an 98.9 3.2E-09 1.1E-13 53.4 5.5 66 2-70 133-219 (240)
410 1igt_B IGG2A intact antibody - 98.9 2.2E-09 7.7E-14 58.3 5.2 71 3-73 361-433 (444)
411 1svz_A Immunoglobulin;, single 98.9 5.8E-09 2E-13 52.8 6.4 67 2-71 141-228 (247)
412 1bii_B Beta-2 microglobulin, M 98.9 3.7E-08 1.3E-12 45.3 8.5 67 3-72 38-106 (119)
413 1igy_B IGG1 intact antibody MA 98.9 3.2E-09 1.1E-13 57.6 5.8 71 2-75 133-205 (434)
414 1n26_A IL-6 receptor alpha cha 98.9 6.6E-09 2.2E-13 54.7 6.8 59 2-68 20-79 (325)
415 1q9r_B S25-2 FAB (IGG1K) heavy 98.9 4E-09 1.4E-13 52.6 5.6 69 2-73 14-105 (222)
416 1hxm_B Gamma-delta T-cell rece 98.9 2.3E-09 7.8E-14 54.3 4.7 71 2-75 146-219 (242)
417 1op3_H FAB 2G12, heavy chain; 98.9 1.2E-08 4.2E-13 51.1 7.3 69 2-73 14-103 (225)
418 2p1y_A Bispecific alpha/beta T 98.9 3.5E-09 1.2E-13 53.2 5.3 67 2-73 14-97 (238)
419 3vh8_G Killer cell immunoglobu 98.9 7.9E-09 2.7E-13 54.0 6.8 65 2-73 232-296 (316)
420 3pl6_D MBP peptide / T-cell re 98.9 1.3E-09 4.3E-14 55.8 3.7 71 3-73 161-240 (268)
421 1iga_A IGA1; immunoglobulin; N 98.9 8.2E-09 2.8E-13 56.6 7.1 72 2-73 364-442 (475)
422 4ei6_B Vbeta16 XV19 type II na 98.9 2.7E-08 9.1E-13 50.3 8.5 64 2-70 16-97 (245)
423 1nfd_E H57 FAB; complex (immun 98.9 1.8E-09 6.1E-14 53.5 4.1 64 2-70 13-90 (212)
424 2j6e_L IGM, FAB light chain; a 98.9 6.3E-09 2.2E-13 52.1 6.1 67 2-73 33-115 (234)
425 3bqu_C 3H6 FAB light chain; be 98.9 6.5E-10 2.2E-14 55.7 2.5 67 2-73 37-117 (233)
426 3umt_A SCFV heavy chain and li 98.9 1.8E-08 6.1E-13 51.3 7.8 67 2-71 16-103 (256)
427 1pz5_B Heavy chain of FAB (SYA 98.9 7.8E-09 2.7E-13 51.5 6.4 69 1-72 13-104 (220)
428 1p6f_A NKP46, natural cytotoxi 98.9 1.5E-08 5.1E-13 51.6 7.5 64 2-72 20-83 (242)
429 1p6f_A NKP46, natural cytotoxi 98.9 5.5E-09 1.9E-13 53.2 5.8 61 2-72 115-175 (242)
430 1xiw_B T-cell surface glycopro 98.9 1.4E-09 4.8E-14 46.7 3.1 61 2-82 8-68 (79)
431 1igy_B IGG1 intact antibody MA 98.9 7.8E-10 2.7E-14 60.0 2.8 73 2-74 350-424 (434)
432 2xzc_L FAB A.17 light chain; i 98.9 1E-08 3.5E-13 50.9 6.6 68 1-73 13-96 (216)
433 1u3h_A T-cell receptor alpha-c 98.4 1.5E-10 5.1E-15 52.4 0.0 70 2-71 13-93 (110)
434 1fo0_A Protein (BM3.3 T cell r 98.9 2.4E-08 8.2E-13 45.5 7.4 66 2-70 14-95 (116)
435 1c5d_H Monoclonal antibody aga 98.9 2.1E-08 7.3E-13 49.9 7.8 69 1-72 13-101 (215)
436 3juy_B 3B3 single chain varian 98.9 6.6E-09 2.3E-13 52.9 5.9 67 2-71 20-107 (256)
437 3gkz_A Anti-methamphetamine si 98.9 6E-09 2E-13 53.0 5.8 66 2-72 155-235 (257)
438 2i24_N NEW antigen receptor PB 98.9 4.4E-08 1.5E-12 45.1 8.1 66 2-70 14-87 (121)
439 1svz_A Immunoglobulin;, single 98.9 8.4E-08 2.9E-12 48.5 9.7 67 2-73 15-100 (247)
440 2gjj_A A21 single-chain antibo 98.9 1.5E-08 5.3E-13 52.0 7.1 67 2-71 152-239 (264)
441 3qib_D 2B4 beta chain; IG doma 98.9 2.5E-09 8.6E-14 54.8 4.1 71 3-73 164-243 (270)
442 1ypz_F T-cell receptor gamma c 98.9 4.7E-09 1.6E-13 52.9 4.9 69 3-74 145-216 (230)
443 2xqy_G A13-D6.3 monoclonal ant 98.9 4.1E-09 1.4E-13 54.2 4.8 71 2-75 143-215 (261)
444 2ptt_A CD48 antigen; CD244, CD 98.9 1.1E-08 3.8E-13 46.1 5.7 71 2-72 17-96 (110)
445 3bn9_D E2 FAB heavy chain; ant 98.9 7.5E-10 2.6E-14 56.8 1.9 73 2-76 147-221 (257)
446 1b6u_A KIR2DL3, P58 killer cel 98.9 2.2E-08 7.6E-13 51.4 7.3 65 2-71 20-84 (257)
447 3bae_H WO2 IGG2A FAB fragment 98.9 1.7E-08 5.9E-13 50.7 6.8 70 1-73 13-104 (228)
448 4ei6_B Vbeta16 XV19 type II na 98.9 3.8E-09 1.3E-13 53.3 4.4 71 3-73 139-218 (245)
449 4dkd_C Macrophage colony-stimu 98.9 9.1E-10 3.1E-14 56.6 2.0 65 2-75 103-170 (292)
450 4ffy_L DENV1-E111 single chain 98.9 1.9E-08 6.6E-13 46.5 6.3 66 2-72 15-98 (126)
451 1mju_H Immunoglobulin MS6-12; 98.9 1.4E-08 4.9E-13 51.0 6.3 68 1-71 13-101 (227)
452 2wbj_D OB TCR; transmembrane, 98.9 3.5E-09 1.2E-13 54.6 4.1 66 2-71 38-122 (279)
453 1eeq_A Kappa-4 immunoglobulin 98.8 2.7E-08 9.1E-13 45.2 6.6 65 2-71 15-99 (114)
454 1fo0_B Protein (BM3.3 T cell r 98.8 2E-07 7E-12 42.2 9.5 69 2-71 15-96 (112)
455 4i0k_A CD276 antigen; immunogl 98.8 2.9E-10 1E-14 56.5 -0.0 71 1-71 8-94 (222)
456 1k5n_B Beta-2-microglobulin, l 98.8 4.2E-08 1.4E-12 43.8 7.0 68 3-73 19-88 (100)
457 2yc1_B Single chain antibody f 98.8 4E-08 1.4E-12 46.7 7.3 65 2-71 30-108 (146)
458 3ux9_B SCFV antibody; five hel 98.8 1.1E-08 3.6E-13 52.1 5.7 66 2-72 16-97 (256)
459 2xqy_G A13-D6.3 monoclonal ant 98.8 2.6E-08 9.1E-13 51.2 7.1 68 2-72 20-108 (261)
460 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 3.3E-08 1.1E-12 50.7 7.5 67 2-71 165-254 (268)
461 2d9c_A Signal-regulatory prote 98.8 3.2E-09 1.1E-13 49.6 3.4 71 2-72 22-102 (136)
462 1neu_A Myelin P0 protein; stru 98.8 7.4E-09 2.5E-13 47.4 4.6 73 2-74 13-106 (124)
463 1b6u_A KIR2DL3, P58 killer cel 98.8 1.9E-08 6.4E-13 51.7 6.3 63 2-71 120-182 (257)
464 1tvd_A T cell receptor, ES204 98.8 2.2E-08 7.7E-13 45.6 5.9 67 2-71 14-98 (116)
465 1dee_B IGM RF 2A2; FAB-IBP com 98.8 1.1E-07 3.7E-12 47.7 8.8 69 1-72 13-102 (223)
466 3q5y_A TCR N15 beta; IG, T cel 98.8 2.3E-08 7.8E-13 50.4 6.4 63 2-69 16-95 (240)
467 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.8 3.4E-09 1.2E-13 54.0 3.3 67 2-73 151-234 (256)
468 3rrq_A Protein PD-1, programme 98.8 3.3E-08 1.1E-12 45.9 6.4 70 2-74 15-100 (129)
469 2fbj_H IGA-kappa J539 FAB (hea 98.8 6.7E-08 2.3E-12 48.3 7.8 70 1-73 13-103 (220)
470 1dlf_L Anti-dansyl immunoglobu 98.8 6.8E-08 2.3E-12 43.8 7.2 65 2-71 15-98 (113)
471 3p73_B Beta-2-microglobulin; I 98.8 8.3E-08 2.8E-12 42.8 7.3 68 3-73 18-87 (99)
472 3qhz_H Human monoclonal antibo 98.8 3.5E-09 1.2E-13 53.3 3.1 78 2-81 146-225 (232)
473 3pl6_D MBP peptide / T-cell re 98.8 6.7E-08 2.3E-12 49.5 7.8 65 2-71 40-122 (268)
474 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 6.6E-08 2.3E-12 49.6 7.7 67 2-73 29-114 (268)
475 1hxm_B Gamma-delta T-cell rece 98.8 9.6E-08 3.3E-12 48.4 8.0 67 2-71 15-102 (242)
476 2or7_A T-cell immunoglobulin a 98.8 1.8E-08 6.1E-13 45.8 4.9 80 2-81 11-106 (115)
477 3o3u_N Maltose-binding peripla 98.8 1.2E-07 4.1E-12 53.2 9.0 70 5-74 489-566 (581)
478 3bn9_D E2 FAB heavy chain; ant 98.8 9.5E-08 3.3E-12 49.1 8.0 69 2-73 14-103 (257)
479 2gki_A Nuclease; anti-DNA anti 98.8 1.3E-08 4.5E-13 52.9 4.8 66 2-72 173-258 (291)
480 3tv3_H PGT128 heavy chain, IG 98.8 1.4E-08 4.9E-13 51.4 4.8 77 2-80 154-232 (239)
481 2qhl_A Novel immune-type recep 98.8 3.1E-09 1.1E-13 48.1 2.1 65 2-71 13-98 (111)
482 1c5d_H Monoclonal antibody aga 98.8 1.4E-08 4.7E-13 50.6 4.6 72 2-78 136-209 (215)
483 2dru_A Chimera of CD48 antigen 98.8 1.3E-08 4.5E-13 49.7 4.4 70 2-72 13-92 (180)
484 3gbl_A BETA2-microglobulin; im 98.8 9.7E-08 3.3E-12 42.4 6.8 68 3-73 18-87 (97)
485 2gki_A Nuclease; anti-DNA anti 98.8 3E-08 1E-12 51.5 5.9 68 2-72 36-124 (291)
486 4acp_A IG gamma-1 chain C regi 98.8 1.8E-08 6.3E-13 51.3 5.0 71 3-73 145-217 (240)
487 2gjj_A A21 single-chain antibo 98.8 5.6E-08 1.9E-12 49.9 6.8 67 2-73 19-105 (264)
488 3nl4_H Antigen binding fragmen 98.8 2.7E-07 9.3E-12 45.8 9.1 67 2-73 13-99 (215)
489 3nfj_J T cell receptor beta ch 98.8 1.7E-08 6E-13 51.0 4.8 72 3-74 139-219 (245)
490 3bj9_1 Immunoglobulin IOTA cha 98.8 1.6E-07 5.5E-12 42.6 7.6 67 2-71 12-99 (116)
491 2zg1_A Sialic acid-binding IG- 98.8 9.6E-09 3.3E-13 50.8 3.7 68 2-72 14-105 (214)
492 3u6r_L Antibody 1:7 (light cha 98.7 4.1E-07 1.4E-11 43.1 8.9 65 2-71 14-92 (143)
493 3to4_D NKT vbeta2 (mouse varia 98.7 2E-08 6.8E-13 51.1 4.6 70 3-72 139-217 (253)
494 3to4_D NKT vbeta2 (mouse varia 98.7 1.7E-07 5.7E-12 47.7 8.0 70 2-72 15-97 (253)
495 3m8o_H Immunoglobulin A1 heavy 98.7 3.6E-08 1.2E-12 49.2 5.5 67 2-71 14-103 (221)
496 3fku_X Neutralizing antibody F 98.7 2.7E-08 9.2E-13 51.5 5.2 67 2-71 14-101 (280)
497 1a2y_B IGG1-kappa D1.3 FV (hea 98.7 2.2E-07 7.4E-12 42.3 7.7 67 2-71 14-100 (116)
498 2wbj_D OB TCR; transmembrane, 98.7 1E-08 3.5E-13 52.9 3.6 72 3-74 165-245 (279)
499 2z35_A T-cell receptor alpha-c 98.7 2.7E-08 9.3E-13 45.0 4.5 65 2-69 14-92 (112)
500 1oaq_L Light chain; antibody, 98.7 1.6E-07 5.3E-12 43.0 7.1 65 2-71 14-95 (120)
No 1
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.83 E-value=1.4e-19 Score=81.33 Aligned_cols=76 Identities=21% Similarity=0.407 Sum_probs=61.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccce--EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKY--FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+..... +.+.. ....++|.|.+++.+|.|.|.|.+.|..|.....+
T Consensus 19 ~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~-----~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~ 93 (100)
T 3knb_A 19 EGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN-----TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATV 93 (100)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-----CSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeec-----ccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEE
Confidence 589999999999999999999999998875432 32221 11245799999999999999999999999887776
Q ss_pred EEe
Q psy11826 80 RTD 82 (83)
Q Consensus 80 ~~~ 82 (83)
.|.
T Consensus 94 ~l~ 96 (100)
T 3knb_A 94 NIH 96 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 2
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.83 E-value=2.7e-18 Score=77.41 Aligned_cols=82 Identities=17% Similarity=0.341 Sum_probs=63.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.+..+.+.|.+.|.|.|.+.|++++..+...................+.|.|.+++.+|+|.|.|.+.|..|.....+.|
T Consensus 15 ~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 94 (103)
T 1wwb_X 15 SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94 (103)
T ss_dssp CCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 35678899999999999999999999887654332211112333445679999999999999999999999998888776
Q ss_pred eC
Q psy11826 82 DY 83 (83)
Q Consensus 82 ~~ 83 (83)
.+
T Consensus 95 ~V 96 (103)
T 1wwb_X 95 HF 96 (103)
T ss_dssp CC
T ss_pred EE
Confidence 53
No 3
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.81 E-value=5.5e-18 Score=78.74 Aligned_cols=81 Identities=15% Similarity=0.261 Sum_probs=63.1
Q ss_pred CceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEe--cCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWF--LGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
+..+.+.|.+.|.|.|.+.|+++|..+............ .........|.|..+...|+|.|.|.+.|..|.....+.
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~ 94 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIM 94 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEE
Confidence 457889999999999999999999998876543322111 011123467999999999999999999999999988887
Q ss_pred EeC
Q psy11826 81 TDY 83 (83)
Q Consensus 81 ~~~ 83 (83)
|.|
T Consensus 95 l~v 97 (126)
T 1he7_A 95 AAF 97 (126)
T ss_dssp ECC
T ss_pred EEE
Confidence 754
No 4
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.81 E-value=4.7e-19 Score=80.46 Aligned_cols=76 Identities=21% Similarity=0.321 Sum_probs=62.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+....+..+... ....+|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 27 ~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 101 (107)
T 3knb_B 27 SGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-----GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE-----TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeec-----CceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEE
Confidence 588999999999999999999999999877655443221 124579999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 102 ~ 102 (107)
T 3knb_B 102 T 102 (107)
T ss_dssp E
T ss_pred E
Confidence 3
No 5
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.77 E-value=4.1e-17 Score=72.74 Aligned_cols=77 Identities=16% Similarity=0.044 Sum_probs=61.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+............ . ....|.|.+++.+|.|.|.|.+.|..|.......|
T Consensus 19 ~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~-~---~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1g1c_A 19 QGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPE-D---NVCELVIRDVTGEDSASIMVKAINIAGETSSHAFL 94 (99)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEE-T---TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcC-C---CEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEE
Confidence 5889999999999999999999999988765543332211 1 14579999999999999999999999987776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 95 ~ 95 (99)
T 1g1c_A 95 L 95 (99)
T ss_dssp E
T ss_pred E
Confidence 3
No 6
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.76 E-value=5.3e-18 Score=75.03 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=59.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.|.|.|.+.|++++ ..+......... ...+.|.|..+..+|+|.|.|.+.|..|.....+
T Consensus 16 ~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~-------~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 88 (93)
T 1wit_A 16 AGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAK-------SSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIF 88 (93)
T ss_dssp TTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEE-------TTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEec-------CCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEE
Confidence 5889999999999999999999998 776554322111 1136799999999999999999999999887776
Q ss_pred EEe
Q psy11826 80 RTD 82 (83)
Q Consensus 80 ~~~ 82 (83)
.|.
T Consensus 89 ~l~ 91 (93)
T 1wit_A 89 EVI 91 (93)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 7
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.75 E-value=3.4e-17 Score=73.52 Aligned_cols=76 Identities=18% Similarity=0.235 Sum_probs=61.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+... .....|.|.+++.+|.|.|.|.+.|..|.......|
T Consensus 22 ~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 96 (103)
T 3qp3_A 22 CGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNT-----SGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATL 96 (103)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEE-----TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEEC-----CCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 588999999999999999999999998876554433221 113579999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 97 ~ 97 (103)
T 3qp3_A 97 D 97 (103)
T ss_dssp E
T ss_pred E
Confidence 3
No 8
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.75 E-value=5.8e-17 Score=74.02 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=60.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....+..+.. ......|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 21 ~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 95 (114)
T 2cqv_A 21 AGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVEN-----SENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNL 95 (114)
T ss_dssp TTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEE-----CSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEE
T ss_pred CCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEE-----cCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEE
Confidence 58899999999999999999999998877654443321 1114579999999999999999999999987665554
No 9
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.74 E-value=3e-16 Score=69.79 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=61.1
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+. |.|.+.|++++..+.......+... . ....|.|.+++.+|.|.|.|.+.|..|.......
T Consensus 15 ~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 89 (97)
T 2bk8_A 15 EGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYE--D---GVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAE 89 (97)
T ss_dssp TTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEE--T---TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEc--C---CeEEEEEecCChhhCeEEEEEEECCCCeEeEEEE
Confidence 58899999999997 8999999999998876555443221 1 1457999999999999999999999998877665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 90 l~ 91 (97)
T 2bk8_A 90 LF 91 (97)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 10
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.74 E-value=1.2e-16 Score=71.27 Aligned_cols=77 Identities=21% Similarity=0.384 Sum_probs=60.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......... .......|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 19 ~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~----~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1u2h_A 19 EGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEE----AEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARL 94 (99)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEE----CGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE----CCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEE
Confidence 58899999999999999999999998876543321111 11123579999999999999999999999987776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 95 ~ 95 (99)
T 1u2h_A 95 E 95 (99)
T ss_dssp E
T ss_pred E
Confidence 3
No 11
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.73 E-value=6.3e-17 Score=72.25 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=60.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+........... ......|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 19 ~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (100)
T 2kdg_A 19 EGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVS----EKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQL 94 (100)
T ss_dssp TTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEE----TTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEc----CCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEE
Confidence 588999999999999999999999988776432221111 1113579999999999999999999999987776665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 95 ~ 95 (100)
T 2kdg_A 95 D 95 (100)
T ss_dssp E
T ss_pred E
Confidence 4
No 12
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.9e-16 Score=72.71 Aligned_cols=75 Identities=23% Similarity=0.399 Sum_probs=59.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.. ....+.. ....+.|.|.++..+|.|.|.|.+.|..|.....+.|
T Consensus 38 ~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~-~~~~~~~-----~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 111 (118)
T 2e7c_A 38 VGEQLNLVVPFQGKPRPQVVWTKGGAPLDT-SRVHVRT-----SDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRI 111 (118)
T ss_dssp SSSCEEEEEEEEEESCCEEEEEETTEECCC-SSCEEEE-----CSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEE
T ss_pred CCCEEEEEEEEccCCCCEEEEEECCEECCC-CcEEEEE-----CCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEE
Confidence 588999999999999999999999988863 2222211 1124579999999999999999999999987766655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 112 ~ 112 (118)
T 2e7c_A 112 R 112 (118)
T ss_dssp E
T ss_pred E
Confidence 3
No 13
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.73 E-value=1.1e-16 Score=71.28 Aligned_cols=76 Identities=21% Similarity=0.396 Sum_probs=59.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc--cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF--HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.. .....+.. ......|.|..++.+|.|.|.|.+.|..|.....+
T Consensus 19 ~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 93 (100)
T 3irg_A 19 EGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN-----TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATV 93 (100)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE-----CSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEe-----cCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEE
Confidence 588999999999999999999999988763 22333221 11136799999999999999999999999877766
Q ss_pred EEe
Q psy11826 80 RTD 82 (83)
Q Consensus 80 ~~~ 82 (83)
.|.
T Consensus 94 ~l~ 96 (100)
T 3irg_A 94 NIH 96 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 14
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=3.9e-17 Score=77.15 Aligned_cols=76 Identities=22% Similarity=0.363 Sum_probs=57.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC----------------------------EEec-ccceEEEEEEecCCCeEEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD----------------------------IELT-FHKYFQVHEWFLGNNTIKSKME 52 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~----------------------------~~~~-~~~~~~~~~~~~~~~~~~~~l~ 52 (83)
.|+.+.|.|.+.|.|.|.+.|++++ ..+. ......+.. ....+.|.
T Consensus 32 ~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~-----~~~~s~L~ 106 (139)
T 1gxe_A 32 AGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVET-----TKDRSIFT 106 (139)
T ss_dssp SSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEE-----ETTEEEEE
T ss_pred CCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEe-----CCCEEEEE
Confidence 5889999999999999999999988 2221 112222211 01135799
Q ss_pred EccCCCCCCeEEEEEeeCCCcceeeEEEEe
Q psy11826 53 IDPATQKDAGYYECVADNPFAIDRRGFRTD 82 (83)
Q Consensus 53 i~~~~~~~~g~y~C~~~~~~g~~~~~~~~~ 82 (83)
|..++.+|+|.|.|.+.|..|.....+.|.
T Consensus 107 I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~ 136 (139)
T 1gxe_A 107 VEGAEKEDEGVYTVTVKNPVGEDQVNLTVK 136 (139)
T ss_dssp CSCCCTTTCEEEEEEEECSSCEEEEEEEEE
T ss_pred ECCCCcccCEEEEEEEEeCCceEEEEEEEE
Confidence 999999999999999999999988877664
No 15
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=71.12 Aligned_cols=76 Identities=25% Similarity=0.343 Sum_probs=61.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+... . ....|.|.+++.+|.|.|.|.+.|..|.......|
T Consensus 20 ~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (99)
T 3puc_A 20 SDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSED--K---GGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94 (99)
T ss_dssp SSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEE--T---TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEe--C---CEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 588999999999999999999999988876555443321 1 13479999999999999999999999987766655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 95 ~ 95 (99)
T 3puc_A 95 T 95 (99)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.72 E-value=9.4e-16 Score=70.38 Aligned_cols=78 Identities=17% Similarity=0.301 Sum_probs=60.4
Q ss_pred ceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEEe
Q psy11826 4 RKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRTD 82 (83)
Q Consensus 4 ~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~~ 82 (83)
....+.|.+.|.|.|.+.|+++|..+............ ......+.|.|.++..+|.|.|.|.+.|..|.....+.+.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 98 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQ-EGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGH 98 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEE-CSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEEC
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEec-cCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEE
Confidence 34678899999999999999999988765543332211 1122356899999999999999999999999988877754
No 17
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.2e-17 Score=73.18 Aligned_cols=72 Identities=22% Similarity=0.419 Sum_probs=57.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+........ . ....|.|.++..+|.|.|.|.+.|..|.....+.|
T Consensus 25 ~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~-----~---~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 96 (99)
T 2yr3_A 25 EGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCE-----A---GVAELHIQDALPEDHGTYTCLAENALGQVSCSAWV 96 (99)
T ss_dssp TTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEE-----T---TEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCE
T ss_pred CCCeEEEEEEEeeeCCCeEEEEECCEECcccceEee-----C---CeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 688999999999999999999999877764332110 1 13579999999999999999999999987666544
No 18
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.71 E-value=4.4e-16 Score=71.42 Aligned_cols=77 Identities=23% Similarity=0.458 Sum_probs=60.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc-cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF-HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.. ..+..+.. ......+|.|.+++.+|.|.|.|.+.|..|.....+.
T Consensus 29 ~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 104 (116)
T 2kkq_A 29 EGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQ----DNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTR 104 (116)
T ss_dssp TTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEE----CTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEe----CCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEE
Confidence 588999999999999999999999988764 23333322 1112457999999999999999999999998776665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 105 l~ 106 (116)
T 2kkq_A 105 LD 106 (116)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 19
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.70 E-value=2.4e-16 Score=68.75 Aligned_cols=65 Identities=25% Similarity=0.415 Sum_probs=52.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.+.+ |.|.+.|+++|..+.......+.. .. ....|.|.+++.+|+|.|.|.+.|..
T Consensus 10 ~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~--~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 10 PGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQ--AG---ARQVLRVQGARSGDAGEYLCDAPQDS 74 (84)
T ss_dssp TTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEE--CS---SCEEEEESSCSSTTCEEEEEECTTTC
T ss_pred cCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEee--cC---CeEEEEecCCCCcccEEEEEEECCEE
Confidence 6899999999865 888999999999998766554432 11 13579999999999999999986643
No 20
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.70 E-value=5.7e-17 Score=72.42 Aligned_cols=77 Identities=21% Similarity=0.396 Sum_probs=59.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.............. ...|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 22 ~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 97 (100)
T 3caf_A 22 AANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ----HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 97 (100)
T ss_dssp TTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecC----eEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEE
Confidence 589999999999999999999999988765432110000001 1369999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 98 ~ 98 (100)
T 3caf_A 98 D 98 (100)
T ss_dssp E
T ss_pred E
Confidence 4
No 21
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=2.4e-16 Score=71.12 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=60.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. ......|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 27 ~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 101 (107)
T 3irg_B 27 SGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA-----DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE-----ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEe-----CCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEE
Confidence 58899999999999999999999998887654433221 1113479999999999999999999999887766555
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 102 ~ 102 (107)
T 3irg_B 102 T 102 (107)
T ss_dssp E
T ss_pred E
Confidence 3
No 22
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.70 E-value=6e-16 Score=73.98 Aligned_cols=76 Identities=25% Similarity=0.440 Sum_probs=61.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. .......|.|.+++..|.|.|.|.+.|..|.....+.|
T Consensus 55 ~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 130 (154)
T 1fhg_A 55 EGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDY----DEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAEL 130 (154)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE----CTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEE----CCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEE
Confidence 58889999999999999999999998887655444321 11124689999999999999999999999987666554
No 23
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.70 E-value=4.3e-17 Score=73.77 Aligned_cols=76 Identities=28% Similarity=0.453 Sum_probs=60.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. ......|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 28 ~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 102 (106)
T 1nct_A 28 EGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTT-----TKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTL 102 (106)
T ss_dssp SSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEE-----CSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEE
T ss_pred CCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE-----CCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEE
Confidence 58899999999999999999999998776554444322 1123589999999999999999999999987766655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 103 ~ 103 (106)
T 1nct_A 103 T 103 (106)
T ss_dssp E
T ss_pred E
Confidence 3
No 24
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.69 E-value=1.3e-16 Score=70.77 Aligned_cols=71 Identities=21% Similarity=0.442 Sum_probs=58.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.| |.+.|++++..+....+..+. ...|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 23 ~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~---------~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 92 (95)
T 2ckn_A 23 PGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT---------GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92 (95)
T ss_dssp TTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC---------SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe---------CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEE
Confidence 588999999998887 799999999877654433221 2379999999999999999999999988777766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 93 ~ 93 (95)
T 2ckn_A 93 N 93 (95)
T ss_dssp E
T ss_pred E
Confidence 4
No 25
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.69 E-value=2.3e-15 Score=68.17 Aligned_cols=81 Identities=21% Similarity=0.297 Sum_probs=58.3
Q ss_pred CCceEEEEeEeCccCC---CeEEEEeCCEEecc---cceEEEEEEecC-CCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPR---PHITWTKDDIELTF---HKYFQVHEWFLG-NNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~---~~~~w~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|. |.+.|++++..... ...+.+...... .......|.|.+++.+|+|.|.|.+.|..|.
T Consensus 18 ~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 97 (108)
T 3cx2_A 18 VGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKF 97 (108)
T ss_dssp TTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCc
Confidence 5899999999999988 99999997632211 122332221111 2223568999999999999999999999999
Q ss_pred eeeEEEEe
Q psy11826 75 DRRGFRTD 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
..+.+.|.
T Consensus 98 ~~~~~~L~ 105 (108)
T 3cx2_A 98 DCSNFNLT 105 (108)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 88877664
No 26
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=3.2e-16 Score=71.11 Aligned_cols=75 Identities=25% Similarity=0.383 Sum_probs=58.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc-cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF-HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.. .....+... ......|.|..++.+|.|.|.|.+.|..|.....+.
T Consensus 22 ~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 97 (110)
T 2dm2_A 22 EGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRD----LDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGR 97 (110)
T ss_dssp TTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEEC----TTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCC
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEEC----CCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEE
Confidence 588999999999999999999999887765 233333221 112357999999999999999999999988765443
No 27
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.69 E-value=1.2e-15 Score=76.00 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=60.5
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+. |.|.+.|++++..+...... .......+|.|.+++.+|.|.|.|.+.|..|...+...
T Consensus 130 ~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~-------~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 202 (207)
T 3rbs_A 130 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKH-------DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 202 (207)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCC-------CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCce-------EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEE
Confidence 57889999999998 99999999999988654321 11223457999999999999999999999999888776
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 203 L~ 204 (207)
T 3rbs_A 203 LV 204 (207)
T ss_dssp EC
T ss_pred Ee
Confidence 63
No 28
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=71.19 Aligned_cols=72 Identities=21% Similarity=0.353 Sum_probs=56.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... ...... . ...|.|..++.+|.|.|.|.+.|..|.....+.
T Consensus 22 ~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~----~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2edj_A 22 VDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ----E----QGTLQIKNLRISDTGTYTCVATSSSGETSWSAV 93 (100)
T ss_dssp SSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC----T----TCCEEEESCCTTTCCEEEEEEECSSCCCBCCEE
T ss_pred CCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc----C----CCEEEEccCCcccCEEEEEEEEcCCCCEEEEEE
Confidence 5889999999999999999999998877632 222111 1 136999999999999999999999987766555
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 94 l 94 (100)
T 2edj_A 94 L 94 (100)
T ss_dssp E
T ss_pred E
Confidence 4
No 29
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=5.6e-16 Score=69.25 Aligned_cols=71 Identities=21% Similarity=0.454 Sum_probs=57.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.| |.+.|++++..+.......+. ...|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 17 ~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~---------~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 86 (99)
T 2cr3_A 17 PGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT---------GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86 (99)
T ss_dssp TTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC---------SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE---------CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEE
Confidence 588999999998876 799999999777654433321 2379999999999999999999999987777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 87 ~ 87 (99)
T 2cr3_A 87 N 87 (99)
T ss_dssp C
T ss_pred E
Confidence 4
No 30
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.68 E-value=9.6e-17 Score=72.53 Aligned_cols=73 Identities=26% Similarity=0.477 Sum_probs=50.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......... . ...|.|.+++.+|.|.|.|.+.|..|.......|
T Consensus 24 ~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~---~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 96 (108)
T 3kvq_A 24 IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD---G----NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFF 96 (108)
T ss_dssp TTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET---T----TTEEEECSCCGGGCEEEEEEEC----CEEEEEEE
T ss_pred CCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC---C----CcEEEEeecCcccCEEEEEEEEeCCCceEEEEEE
Confidence 58899999999999999999999988776544332211 1 2469999999999999999999999987766554
No 31
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.67 E-value=8.4e-16 Score=67.68 Aligned_cols=61 Identities=25% Similarity=0.425 Sum_probs=52.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+..... ..|.|.+++.+|.|.|.|.+.|..|...
T Consensus 17 ~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 17 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK--------------KLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp TTSCEEEECEEECSSCCEEEEEETTEECTTCCS--------------SEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC--------------CeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 688999999999999999999999987765431 3689999999999999999999988644
No 32
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.66 E-value=2.8e-16 Score=69.49 Aligned_cols=64 Identities=17% Similarity=0.418 Sum_probs=50.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+ |.|.+.|+++|..+.......+... + ...+|.|.++..+|+|.|.|.+.|.
T Consensus 20 ~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~--~---~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 20 TSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENE--G---PHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp TTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEE--T---TEEEEEESSCCGGGCSEEEEECSSC
T ss_pred CCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEec--C---CeEEEEeCCCChhhcEEEEEEEcce
Confidence 5899999999855 8889999999998877655444321 1 1357999999999999999998664
No 33
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3.3e-15 Score=66.99 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=55.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+ .|.|.+.|+++|..+....+..+.. . .....|.|.++..+|.|.|.|.+.|........+.+
T Consensus 21 ~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~--~---~~~~~L~I~~v~~~D~G~Y~C~a~N~~~~~~a~L~V 93 (100)
T 2yuz_A 21 LGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQ--K---GRIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHV 93 (100)
T ss_dssp TTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEE--C---SSEEEEEESSCCGGGCSEEEEEESSSCCCEEEEEEE
T ss_pred CCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEE--e---CCEEEEEECCCChhhCEEEEEEEcCCCeeEEEEEEE
Confidence 58889999998 8889999999999987665554432 1 113579999999999999999999984344444443
No 34
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.4e-16 Score=72.19 Aligned_cols=76 Identities=22% Similarity=0.436 Sum_probs=58.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+........... ......|.|.+++.+|.|.|.|.+.|..|.....+.|
T Consensus 23 ~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 98 (110)
T 2dm3_A 23 EGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVR----ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLEL 98 (110)
T ss_dssp SSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEEC----TTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEE
T ss_pred CCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEe----cCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEE
Confidence 588899999999999999999999887765443222211 1113579999999999999999999999887665544
No 35
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.65 E-value=3.3e-15 Score=66.17 Aligned_cols=69 Identities=26% Similarity=0.460 Sum_probs=55.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+ .|.+.|++++..+......... ...|.|.+++.+|+|.|.|.+.|..|.....+.|
T Consensus 15 ~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~---------~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 83 (95)
T 4hwu_A 15 PGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI---------GEYLQIKGATPRDSGLYACTAARTVDSETWIFMV 83 (95)
T ss_dssp TTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE---------TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe---------CCEEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence 6899999999876 5799999999888665443321 1369999999999999999999999877666655
No 36
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=5.8e-15 Score=68.62 Aligned_cols=81 Identities=26% Similarity=0.352 Sum_probs=56.8
Q ss_pred CCceEEEEeEeCcc---CCCeEEEEeCCEEe-c--ccceEEEEEEe-cCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF---PRPHITWTKDDIEL-T--FHKYFQVHEWF-LGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~---~~~~~~w~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
+|+.+.|.|.+.+. |.|.|.|+++.... . ....+.+.... .........|.|.++...|+|.|.|.+.|..|.
T Consensus 21 eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~ 100 (126)
T 2dav_A 21 VGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKF 100 (126)
T ss_dssp TTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCE
T ss_pred CCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCc
Confidence 58899999998764 89999999964111 1 11233332211 122334578999999999999999999999888
Q ss_pred eeeEEEEe
Q psy11826 75 DRRGFRTD 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
..+.+.|.
T Consensus 101 ~~~~~~L~ 108 (126)
T 2dav_A 101 DSCSFDLE 108 (126)
T ss_dssp EEECCEEE
T ss_pred EEEEEEEE
Confidence 77665553
No 37
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=6e-16 Score=71.01 Aligned_cols=71 Identities=25% Similarity=0.464 Sum_probs=56.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....... ...|.|.+++.+|.|.|.|.+.|..|.....+.
T Consensus 22 ~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (118)
T 2eo9_A 22 VDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE--------NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAY 93 (118)
T ss_dssp TTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEE--------TTEEEEESCCGGGCCCEEEEEECSSCEEEEECC
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEcc--------CCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEE
Confidence 5889999999999999999999998877542 2222211 126999999999999999999999988665443
No 38
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.64 E-value=1.1e-14 Score=71.94 Aligned_cols=77 Identities=19% Similarity=0.373 Sum_probs=61.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.... ...+.|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 131 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 206 (212)
T 2r15_A 131 EGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEA----GRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 206 (212)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEET----TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcC----CCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEE
Confidence 4788999999999999999999999988766544433210 113589999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 207 ~ 207 (212)
T 2r15_A 207 S 207 (212)
T ss_dssp E
T ss_pred E
Confidence 3
No 39
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.63 E-value=3.2e-15 Score=66.55 Aligned_cols=71 Identities=25% Similarity=0.435 Sum_probs=54.2
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+. +.|.+.+.|++++.......... ....|.|.+++.+|.|.|.|.+.|..|.......
T Consensus 24 ~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~----------~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (98)
T 1gl4_B 24 PGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMD----------FNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93 (98)
T ss_dssp TTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEE----------ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred cCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeec----------CCCEEEEeCCChhhCEEEEEEecCCCCccccEEE
Confidence 689999999988 68999999998753332221111 0237999999999999999999999998776665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 94 l~ 95 (98)
T 1gl4_B 94 LH 95 (98)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 40
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.63 E-value=6.4e-15 Score=65.27 Aligned_cols=65 Identities=18% Similarity=0.150 Sum_probs=51.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.+.+ +.|.+.|+++|..+....+..+... . ....|.|.++..+|+|.|.|.+.|..
T Consensus 19 ~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~--g---~~~~L~I~~v~~~D~G~Y~C~a~n~~ 83 (93)
T 1waa_A 19 VGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIED--G---KKHILILHNCQLGMTGEVSFQAANTK 83 (93)
T ss_dssp TTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEE--T---TEEEEEECSCCGGGCEEEEEEETTEE
T ss_pred CCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEE--C---CEEEEEECCCChhhCEEEEEEECCCc
Confidence 5889999999876 4578999999998877655544321 1 13579999999999999999998854
No 41
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.4e-14 Score=72.12 Aligned_cols=75 Identities=23% Similarity=0.446 Sum_probs=59.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ...+.. .. ..+.|.|..+..+|.|.|.|.+.|..|.....+
T Consensus 32 ~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~--~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 106 (215)
T 3mtr_A 32 EGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYN--TP---SASYLEVTPDSENDFGNYNCTAVNRIGQESLEF 106 (215)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEE--ET---TEEEEEECCCSGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEec--CC---CeeEEEEecCChhhCeEEEEEEEECCCceEEEE
Confidence 58999999999999999999999998887542 222221 01 146799999999999999999999999876665
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.+
T Consensus 107 ~l 108 (215)
T 3mtr_A 107 IL 108 (215)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 42
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.61 E-value=7.4e-15 Score=73.04 Aligned_cols=77 Identities=16% Similarity=0.073 Sum_probs=51.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.... ..++. .........+.+..++.+|.|.|+|.+.|..|..+..+
T Consensus 120 ~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~---~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~ 196 (203)
T 4fa8_A 120 DFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVM---KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVY 196 (203)
T ss_dssp CSCCEEEEEEEEEESCCEEEECCC------------CCE---ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEEE
T ss_pred CCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEE---EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEE
Confidence 58899999999999999999988765443211 11111 11112234566778999999999999999999988765
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.-
T Consensus 197 vs 198 (203)
T 4fa8_A 197 VS 198 (203)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 43
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.61 E-value=6e-16 Score=71.40 Aligned_cols=80 Identities=24% Similarity=0.360 Sum_probs=61.1
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEeccc--ceEEEEEEecCCCeEEEEEEEccCCCCCC-eEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIELTFH--KYFQVHEWFLGNNTIKSKMEIDPATQKDA-GYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~~~-g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.|. +.|++++..+... .++.+.... ......+.|.|.+++.+|. |.|.|.+.|..|....
T Consensus 27 ~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~ 105 (122)
T 2cry_A 27 HGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIS-TEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTE 105 (122)
T ss_dssp TTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEE-ETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEE
T ss_pred cCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEec-CCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEE
Confidence 588899999999999997 9999998877642 333332111 1223356899999999998 9999999999998877
Q ss_pred EEEEe
Q psy11826 78 GFRTD 82 (83)
Q Consensus 78 ~~~~~ 82 (83)
.+.|.
T Consensus 106 ~~~l~ 110 (122)
T 2cry_A 106 IIRLK 110 (122)
T ss_dssp EECCC
T ss_pred EEEEE
Confidence 66553
No 44
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.60 E-value=2.9e-14 Score=64.37 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=55.9
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCCEEecccceEEEEEEecC---CCeEEEEEEEccCCCCCCeEEEEEeeCCCcce-
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLG---NNTIKSKMEIDPATQKDAGYYECVADNPFAID- 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~- 75 (83)
.|+.+.|.|.+.+. +.+.+.|++++..+.............. .......|.|.+++.+|.|.|.|.+.|..|..
T Consensus 24 ~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~ 103 (112)
T 3so5_A 24 XGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSY 103 (112)
T ss_dssp TTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcEE
Confidence 58899999998854 4678999999988765432111111011 11224689999999999999999999998873
Q ss_pred eeEEEE
Q psy11826 76 RRGFRT 81 (83)
Q Consensus 76 ~~~~~~ 81 (83)
.....|
T Consensus 104 s~~~~l 109 (112)
T 3so5_A 104 SVXAXL 109 (112)
T ss_dssp CCCEEE
T ss_pred EeEEEE
Confidence 344443
No 45
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=66.75 Aligned_cols=81 Identities=25% Similarity=0.376 Sum_probs=57.4
Q ss_pred CCceEEEEeEeCcc---CCCeEEEEeCCE-Eecc--cceEEEEEEec-CCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF---PRPHITWTKDDI-ELTF--HKYFQVHEWFL-GNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~---~~~~~~w~~~~~-~~~~--~~~~~~~~~~~-~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |.|.|.|+++.. .+.. ...+.+..... ........|.|.++...|+|.|.|.+.|..|.
T Consensus 26 eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~ 105 (118)
T 2edn_A 26 TGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTC 105 (118)
T ss_dssp TTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCE
T ss_pred CCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCc
Confidence 58899999998764 789999999641 1111 12233322211 22234578999999999999999999999998
Q ss_pred eeeEEEEe
Q psy11826 75 DRRGFRTD 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
..+.+.|.
T Consensus 106 ~s~~~~L~ 113 (118)
T 2edn_A 106 DSCGFNID 113 (118)
T ss_dssp EEEEECCE
T ss_pred EEEEEEEE
Confidence 87776654
No 46
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.60 E-value=8.5e-15 Score=67.41 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=54.1
Q ss_pred CCceEEEEeEeCc--cCCCeEEEEeCCEEecc-----cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEG--FPRPHITWTKDDIELTF-----HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~--~~~~~~~w~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+ .|.+.+.|++++..+.. ........ .......+.|.|.+++.+|+|.|.|.+.|..|.
T Consensus 22 ~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 99 (122)
T 3s35_X 22 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSG--SEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 99 (122)
T ss_dssp ETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEE--TTEEEEEEEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred cCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccC--CceeeEEEEEEECCCCcccCEEEEEEEccCCCc
Confidence 5889999999988 44568899998764321 11000000 000123467999999999999999999999998
Q ss_pred eeeEEEE
Q psy11826 75 DRRGFRT 81 (83)
Q Consensus 75 ~~~~~~~ 81 (83)
......|
T Consensus 100 ~~~~~~l 106 (122)
T 3s35_X 100 KKNSTFV 106 (122)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 7766554
No 47
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=7.6e-14 Score=62.60 Aligned_cols=63 Identities=21% Similarity=0.386 Sum_probs=49.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+.+ +.+.+.|++++..+.... ++.+.. .. ....|.|.+++.+|.|.|.|.+.|
T Consensus 21 ~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~--~~---~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 21 CGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRV--EG---KKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp TTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEE--ET---TEEEEEEEEECTTTCSEEEEEETT
T ss_pred CCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEE--cC---CEEEEEECCCCcccCEEEEEEECC
Confidence 5889999999877 778999999999887654 333322 11 135799999999999999999988
No 48
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.59 E-value=9.3e-15 Score=78.02 Aligned_cols=72 Identities=25% Similarity=0.483 Sum_probs=60.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.......+. ...|.|..+..+|+|.|.|.+.|..|...+...|
T Consensus 309 ~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~---------~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L 379 (384)
T 3kld_A 309 MEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE---------QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAEL 379 (384)
T ss_dssp TTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE---------TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe---------CCEEEEeecChhhCEEEEEEEEeCCceEEeceEE
Confidence 5888999999999999999999999988765544321 1379999999999999999999999998777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 380 ~ 380 (384)
T 3kld_A 380 S 380 (384)
T ss_dssp E
T ss_pred E
Confidence 4
No 49
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.59 E-value=8e-14 Score=72.48 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEE-EecC------CCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHE-WFLG------NNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|.|.+.|+++|..+.......... .... .....+.|.|..++.+| .|.|.|.+.|..|
T Consensus 223 ~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G 302 (315)
T 1itb_B 223 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 302 (315)
T ss_dssp SSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTC
T ss_pred CCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCC
Confidence 58899999999999999999999999887643211110 0001 01235689999999999 9999999999999
Q ss_pred ceeeEEEEe
Q psy11826 74 IDRRGFRTD 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
.....+.|.
T Consensus 303 ~~~~~~~l~ 311 (315)
T 1itb_B 303 IDAAYIQLI 311 (315)
T ss_dssp CEEEEEEEE
T ss_pred ceeEEEEEE
Confidence 988877764
No 50
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.58 E-value=4.2e-14 Score=72.79 Aligned_cols=81 Identities=20% Similarity=0.219 Sum_probs=58.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++......................+.|.|..+..+|.|.|.|.+.|..|.......|
T Consensus 195 ~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 274 (289)
T 3mjg_X 195 QGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAI 274 (289)
T ss_dssp TTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEE
T ss_pred cCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEE
Confidence 58899999999999999999997665433211111111001113345789999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 275 ~ 275 (289)
T 3mjg_X 275 N 275 (289)
T ss_dssp E
T ss_pred E
Confidence 3
No 51
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.58 E-value=2.7e-14 Score=69.80 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=61.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+........... .. ...|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 117 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~--~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 191 (194)
T 2a38_A 117 QGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQE--GD---LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191 (194)
T ss_dssp TTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEE--TT---EEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEc--CC---EEEEEECCCChhcCeEEEEEEEeCCCceEEEEEE
Confidence 578899999999999999999999998876554443221 11 3479999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 192 ~ 192 (194)
T 2a38_A 192 L 192 (194)
T ss_dssp E
T ss_pred E
Confidence 4
No 52
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.58 E-value=6.7e-14 Score=74.00 Aligned_cols=82 Identities=15% Similarity=0.247 Sum_probs=63.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEe--cCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWF--LGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+.|.|.|.+.|++++..+............ .........|.|..++.+|+|.|.|.+.|..|.....+
T Consensus 260 ~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~ 339 (347)
T 2ifg_A 260 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 339 (347)
T ss_dssp ESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEE
Confidence 3788999999999999999999999888754432221110 11223456899999999999999999999999988877
Q ss_pred EEeC
Q psy11826 80 RTDY 83 (83)
Q Consensus 80 ~~~~ 83 (83)
.+.+
T Consensus 340 ~l~V 343 (347)
T 2ifg_A 340 MAAF 343 (347)
T ss_dssp EECS
T ss_pred EEEe
Confidence 7653
No 53
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.58 E-value=4e-14 Score=72.65 Aligned_cols=76 Identities=22% Similarity=0.340 Sum_probs=61.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+... .....|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 206 ~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 280 (284)
T 2rik_A 206 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE-----NFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSI 280 (284)
T ss_dssp TTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEE-----TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEc-----CCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEE
Confidence 588899999999999999999999998876654443321 113579999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 281 ~ 281 (284)
T 2rik_A 281 T 281 (284)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.58 E-value=1.5e-14 Score=75.36 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=56.6
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.|.|.| .+.|++++..+....... ..+|.|.+++.+|+|.|.|.+.|..|.....+.
T Consensus 231 ~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~-----------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 299 (313)
T 4fqp_A 231 GQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQ-----------GAQLLIRPVDKPINTTLICNVTNALGARQAELT 299 (313)
T ss_dssp TCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEE-----------TTEEEECCCSSCCEEEEEEEEECSSCEEEEEEE
T ss_pred CCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEe-----------CCEEEECcCChhhCEEEEEEEEeCCCcEEEEEE
Confidence 46789999999999999 599999998776432111 236999999999999999999999998777665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 300 l~ 301 (313)
T 4fqp_A 300 VQ 301 (313)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 55
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.57 E-value=2.5e-14 Score=73.58 Aligned_cols=74 Identities=24% Similarity=0.495 Sum_probs=60.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+......... .. ...|.|..+..+|.|.|.|.+.|..|.......+
T Consensus 208 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~----~~---~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 280 (291)
T 2wim_A 208 RGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK----GS---NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 280 (291)
T ss_dssp SCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEEC----ST---TCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEc----CC---ccEEEEeeCCcccCEEEEEEEEECCCceeeeEEE
Confidence 5889999999999999999999999988765443321 11 2469999999999999999999999998887766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 281 ~ 281 (291)
T 2wim_A 281 Q 281 (291)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.3e-14 Score=70.57 Aligned_cols=74 Identities=23% Similarity=0.459 Sum_probs=59.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......... . ...|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 112 ~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~---~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 184 (189)
T 2v5t_A 112 RGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG---S----NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 184 (189)
T ss_dssp SCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEET---T----TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEec---C----CCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEE
Confidence 58889999999999999999999999887655433211 1 2369999999999999999999999987776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 185 ~ 185 (189)
T 2v5t_A 185 Q 185 (189)
T ss_dssp E
T ss_pred E
Confidence 3
No 57
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.3e-14 Score=65.43 Aligned_cols=70 Identities=21% Similarity=0.255 Sum_probs=53.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.+ +.|++++..+.......+... . ....|.|.++..+|.|.|.|.+.|.......
T Consensus 22 ~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 91 (106)
T 2dlt_A 22 AAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHV--G---RFHKLVIDDVRPEDEGDYTFVPDGYALSLSA 91 (106)
T ss_dssp SSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEE--T---TEEEEEESSCCTTTCSCEEEEEETSCCCCCB
T ss_pred CCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEe--C---CEEEEEECCCCcCCCEEEEEEEccCCceEEE
Confidence 58899999999988877 999999988766554443221 1 1357999999999999999999997443333
No 58
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=2.7e-15 Score=66.64 Aligned_cols=59 Identities=27% Similarity=0.522 Sum_probs=49.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.|..+.
T Consensus 24 ~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~--------------~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 82 (96)
T 2ens_A 24 PGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP--------------SPVLILPEIGPQDQGTYSCVATHSSHG 82 (96)
T ss_dssp TTCEEEEECCCSSCSSCCCCCEESSSBCSSCC--------------CSEEEEESCCTTTCEEEECEECCSSCC
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCEECcCCC--------------CCEEEECCCCcccCEEEEEEEEeCCCC
Confidence 58999999999999999999999887765432 136899999999999999999996553
No 59
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=4.7e-14 Score=63.31 Aligned_cols=67 Identities=22% Similarity=0.397 Sum_probs=53.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.+ +.|++++..+.......+.. .. ....|.|.+++.+|.|.|.|.+.|..+.
T Consensus 24 ~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~--~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 90 (104)
T 2e6p_A 24 TSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKM--DG---RKHRLILPEAKVQDSGEFECRTEGVSAF 90 (104)
T ss_dssp SSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEE--ET---TEEEEEESSCCTTTCEEEEEECSSCCCC
T ss_pred CCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEe--CC---CEEEEEECCCChhhCEEEEEEECCceEE
Confidence 58899999999999988 99999999887654443321 11 1357999999999999999999987553
No 60
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.57 E-value=3.2e-13 Score=69.38 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=61.2
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+ .|.+.+.|++++..+........ ........+.|.|..++.+|.|.|.|.+.|..|.......
T Consensus 200 ~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~ 276 (289)
T 3ejj_X 200 RGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDF---QDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMN 276 (289)
T ss_dssp SSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEE---CSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred eCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCccc---ccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEE
Confidence 5889999999988 78899999999987765432111 1122233568999999999999999999999999888776
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 277 L~ 278 (289)
T 3ejj_X 277 FQ 278 (289)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 61
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.57 E-value=2.5e-14 Score=70.12 Aligned_cols=76 Identities=28% Similarity=0.398 Sum_probs=60.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEcc-CCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDP-ATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+... .....|.|.. +..+|.|.|.|.+.|..|.....+.
T Consensus 118 ~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 192 (197)
T 2j8h_A 118 RGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVT-----RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (197)
T ss_dssp TTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEEC-----SSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEc-----CCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEE
Confidence 478899999999999999999999988875544333211 1145799999 9999999999999999998877766
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 193 l~ 194 (197)
T 2j8h_A 193 LD 194 (197)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 62
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=8.9e-14 Score=62.31 Aligned_cols=63 Identities=24% Similarity=0.410 Sum_probs=50.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+.+ |.+.+.|++++..+.......+... .. ...|.|.+++.+|.|.|.|.+.|
T Consensus 22 ~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~--~~---~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 22 PGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCE--GT---MAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp TTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEE--TT---EEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEEC--CC---EEEEEECCCCcccCEEEEEEEcc
Confidence 6889999999987 7888999999988766554443321 11 45799999999999999999998
No 63
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.56 E-value=5.2e-14 Score=73.07 Aligned_cols=77 Identities=19% Similarity=0.406 Sum_probs=61.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. .....+.|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 236 ~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l 311 (317)
T 2y25_A 236 EGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKF----EAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 311 (317)
T ss_dssp TTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECC----BTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEE----cCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEE
Confidence 47889999999999999999999998887655433321 11223589999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 312 ~ 312 (317)
T 2y25_A 312 S 312 (317)
T ss_dssp E
T ss_pred E
Confidence 4
No 64
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.56 E-value=3.7e-15 Score=68.22 Aligned_cols=75 Identities=25% Similarity=0.348 Sum_probs=50.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccce---EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKY---FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+..... ..... ...+......+.+.+++.+|.|.|.|.+.|..|....
T Consensus 23 ~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 23 KGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML-LPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100 (117)
T ss_dssp TTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEE-CTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEEC
T ss_pred CCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEE-ecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceEe
Confidence 588999999999999999999999987764321 00000 0111111112223356789999999999999997643
No 65
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.55 E-value=9.1e-14 Score=72.02 Aligned_cols=74 Identities=20% Similarity=0.352 Sum_probs=59.6
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.| .+.|++++..+.......+. .....|.|.+++.+|.|.|.|.+.|..|.....+.
T Consensus 235 ~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~-------~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 307 (312)
T 2y23_A 235 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK-------DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307 (312)
T ss_dssp TTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC-----------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEE
T ss_pred CCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE-------CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeE
Confidence 58899999999999988 99999999887644332221 11358999999999999999999999999888777
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 308 l~ 309 (312)
T 2y23_A 308 LV 309 (312)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 66
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.55 E-value=1.5e-13 Score=61.34 Aligned_cols=61 Identities=18% Similarity=0.309 Sum_probs=48.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.+.|.|.+. .|.|.+.|++++..+.......+.. .. ....|.|.++..+|.|.|.|.+
T Consensus 22 ~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~--~~---~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 22 KGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEH--KG---CQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp TTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEE--ET---TEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEe--cC---CEEEEEEcCCCcCcCEEEEEEE
Confidence 588999999988 7889999999998877655444332 11 1347999999999999999998
No 67
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.55 E-value=7.2e-14 Score=74.32 Aligned_cols=66 Identities=24% Similarity=0.506 Sum_probs=57.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... +.|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 321 ~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~---------------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 385 (388)
T 2v5m_A 321 FGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE---------------SVLRIESVKKEDKGMYQCFVRNDRESAEASAEL 385 (388)
T ss_dssp TTSCEEEEEEEEEECCCEEEEEETTEECSCCS---------------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCCEEEEEEeccccCCeEEEEECCEECccCC---------------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 58899999999999999999999998776432 369999999999999999999999998887766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 386 ~ 386 (388)
T 2v5m_A 386 K 386 (388)
T ss_dssp E
T ss_pred E
Confidence 4
No 68
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.55 E-value=8.4e-14 Score=61.67 Aligned_cols=61 Identities=13% Similarity=0.311 Sum_probs=48.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.+.|.|.+ +.|.+.+.|++++..+.....+.+... . ....|.|.+++.+|.|.|.|.+
T Consensus 22 ~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 22 AGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATE--G---TRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp TTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEE--T---TEEEEEESSCCTTCCSEEEEEE
T ss_pred CCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEc--C---CEEEEEEcCCCcccCEEEEEEE
Confidence 58899999998 788889999999988775544433221 1 1357999999999999999999
No 69
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.54 E-value=3.6e-13 Score=60.53 Aligned_cols=75 Identities=12% Similarity=0.245 Sum_probs=53.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE-Eecc-------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI-ELTF-------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|.+.+.|++++. .+.. ..+...... ......|.|.+++.+|+|.|.|.+.| .+
T Consensus 20 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~ 94 (108)
T 3m45_A 20 EGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRA----SWHELSISVSDVSLSDEGQYTCSLFT-MP 94 (108)
T ss_dssp TTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEE----SSSEEEEEECSCCGGGCEEEEEEECS-SS
T ss_pred eCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeec----CCCcEEEEECCCChhHCeEEEEEEEc-CC
Confidence 58899999999999999999998764 2211 112222111 01245799999999999999999999 77
Q ss_pred ceeeEEEE
Q psy11826 74 IDRRGFRT 81 (83)
Q Consensus 74 ~~~~~~~~ 81 (83)
.......|
T Consensus 95 ~~~~~~~L 102 (108)
T 3m45_A 95 VKTSKAYL 102 (108)
T ss_dssp CEEEEEEE
T ss_pred CcEEEEEE
Confidence 66555444
No 70
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.54 E-value=3.2e-13 Score=66.13 Aligned_cols=76 Identities=20% Similarity=0.322 Sum_probs=57.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+... ........ . .....|.|.+++.+|.|.|.|.+.|..|.......
T Consensus 18 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 93 (197)
T 2j8h_A 18 YQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEF-K---GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTAS 93 (197)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEE-T---TTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEc-C---CCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEE
Confidence 5889999999999999999999999887653 22332221 1 11357999999999999999999998877655544
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 94 l 94 (197)
T 2j8h_A 94 L 94 (197)
T ss_dssp E
T ss_pred E
Confidence 3
No 71
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.54 E-value=1.6e-13 Score=67.04 Aligned_cols=76 Identities=17% Similarity=0.307 Sum_probs=60.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCC-CCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ-KDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.+.|.+.+.|.|.+.|++++..+.......+.. ......|.|..+.. +|.|.|.|.+.|..|.....+.
T Consensus 117 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 191 (197)
T 3lcy_A 117 VGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIEN-----TEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILD 191 (197)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE-----CSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEE
T ss_pred CCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEE-----cCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEE
Confidence 47889999999999999999999998887655443322 11135799999985 8999999999999998877766
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 192 l~ 193 (197)
T 3lcy_A 192 VE 193 (197)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 72
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.54 E-value=7.6e-13 Score=64.64 Aligned_cols=76 Identities=21% Similarity=0.423 Sum_probs=57.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEecc---cceEEEEEEecCCCeEEEEEEEccCC-CCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIELTF---HKYFQVHEWFLGNNTIKSKMEIDPAT-QKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~l~i~~~~-~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.|.+.|++ ++..+.. .....+.. ....+.|.|..+. .+|.|.|.|.+.|..|..
T Consensus 106 ~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 180 (190)
T 2wv3_A 106 EGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIIN-----KENYTELNIVNLQITEDPGEYECNATNSIGSA 180 (190)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEE-----CSSEEEEEECSCCTTTSCEEEEEEEECSSCEE
T ss_pred CCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEec-----CCCeeEEEEEeccccCCCEEEEEEEEecCCcc
Confidence 57889999999999999999999 7766542 22222211 1113479999999 799999999999999988
Q ss_pred eeEEEEe
Q psy11826 76 RRGFRTD 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
...+.|.
T Consensus 181 ~~~~~l~ 187 (190)
T 2wv3_A 181 SVSTVLR 187 (190)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 7766553
No 73
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=6.7e-13 Score=60.28 Aligned_cols=63 Identities=19% Similarity=0.348 Sum_probs=49.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+. .|.+.+.|++++..+.......+... .....|.|.++..+|.|.|.|.+.|
T Consensus 27 ~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~-----~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 27 RLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKE-----DTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp TTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEEC-----SSEEEEEESSCCTTTCEEEEEESSS
T ss_pred cCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEEC-----CCEEEEEECCCCcccCEEEEEEEec
Confidence 588999999985 78889999999988876544333210 1134799999999999999999988
No 74
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.53 E-value=4.1e-14 Score=72.78 Aligned_cols=74 Identities=27% Similarity=0.571 Sum_probs=58.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc----eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK----YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ..... .. .+.|.|..++.+|.|.|.|.+.|..|....
T Consensus 210 ~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~----~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 282 (291)
T 1qz1_A 210 LGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFS----DD---SSELTIRNVDKNDEAEYVCIAENKAGEQDA 282 (291)
T ss_dssp SCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEEC----TT---SCEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEc----CC---CcEEEEEecChhcCEEEEEEEEeCCCceEE
Confidence 58899999999999999999999998876543 11110 11 247999999999999999999999998877
Q ss_pred EEEEe
Q psy11826 78 GFRTD 82 (83)
Q Consensus 78 ~~~~~ 82 (83)
.+.|.
T Consensus 283 ~~~l~ 287 (291)
T 1qz1_A 283 SIHLK 287 (291)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 75
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.53 E-value=2e-14 Score=67.40 Aligned_cols=72 Identities=26% Similarity=0.431 Sum_probs=53.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc----------ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH----------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... ........ ......+.|.|.+++.+|.|.|.|.+.|.
T Consensus 35 ~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 112 (137)
T 3qr2_A 35 VGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHAT--YHQHAASTISIDTLVEEDTGTYECRASND 112 (137)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEE--ESSSEEEEEEECSCCGGGCEEEEEEEECC
T ss_pred CCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecc--cccccceEEEECCCCcccCEEEEEEEEec
Confidence 5889999999999999999999976544321 12222111 11123468999999999999999999999
Q ss_pred Ccce
Q psy11826 72 FAID 75 (83)
Q Consensus 72 ~g~~ 75 (83)
.|..
T Consensus 113 ~G~~ 116 (137)
T 3qr2_A 113 PDRN 116 (137)
T ss_dssp TTSS
T ss_pred CCcc
Confidence 8864
No 76
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.53 E-value=4.5e-13 Score=65.46 Aligned_cols=75 Identities=23% Similarity=0.432 Sum_probs=58.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.......... .....+|.|..++.+|.|.|.|.+.+..+.......+
T Consensus 21 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (197)
T 3lcy_A 21 LGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSS-----DGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 95 (197)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEE-----SSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEe-----CCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEE
Confidence 58899999999999999999999998887655443322 1113579999999999999999999988876554443
No 77
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.53 E-value=3.6e-14 Score=69.20 Aligned_cols=76 Identities=26% Similarity=0.460 Sum_probs=57.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEeccc-----ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELTFH-----KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.|.+.|+++ +..+... ....... ....+.|.|..+..+|.|.|.|.+.|..|.
T Consensus 108 ~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 182 (192)
T 2va4_A 108 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG-----QHGSSSLHIKDVKLSDSGRYDCEAASRIGG 182 (192)
T ss_dssp TTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEE-----ETTEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred eCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEee-----ccCceEEEEecCCcccCEEEEEEEEecCCc
Confidence 488899999999999999999997 5555431 1122111 011357999999999999999999999998
Q ss_pred eeeEEEEe
Q psy11826 75 DRRGFRTD 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
....+.|.
T Consensus 183 ~~~~~~l~ 190 (192)
T 2va4_A 183 HQKSMYLD 190 (192)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 87777664
No 78
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.53 E-value=6.7e-14 Score=74.35 Aligned_cols=72 Identities=25% Similarity=0.554 Sum_probs=60.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....+.... ...|.|.++..+|.|.|.|.+.|..|.......|
T Consensus 308 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 378 (382)
T 1cs6_A 308 IGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS---------GGELRFSKLVLEDSGMYQCVAENKHGTVYASAEL 378 (382)
T ss_dssp TTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE---------TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE---------CCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEE
Confidence 5889999999999999999999999988765443321 1369999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 379 ~ 379 (382)
T 1cs6_A 379 T 379 (382)
T ss_dssp E
T ss_pred E
Confidence 4
No 79
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=5.2e-13 Score=64.88 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=56.8
Q ss_pred CCceEEEEeEeCccC-CCeEEEEe---CCEE-eccc--ceEEEEEEecCCCeEEEEEEEccCC-CCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTK---DDIE-LTFH--KYFQVHEWFLGNNTIKSKMEIDPAT-QKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~---~~~~-~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~-~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.| .|.+.|++ ++.. +... .++.+.. . ...+.|.|..++ .+|.|.|.|.+.|..|
T Consensus 97 ~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g 171 (184)
T 3b5h_A 97 EGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS--S---QGRSELHIENLNMEADPGQYRCNGTSSKG 171 (184)
T ss_dssp TTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEE--E---TTEEEEEECSCCTTTSSEEEEEEEEETTE
T ss_pred CCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEe--c---CCeeEEEEeeccccccCceEEEEEEeCCC
Confidence 588999999999999 79999999 4443 3322 2233221 1 113579999999 8999999999999999
Q ss_pred ceeeEEEEe
Q psy11826 74 IDRRGFRTD 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
.....+.|.
T Consensus 172 ~~~~~~~l~ 180 (184)
T 3b5h_A 172 SDQAIITLR 180 (184)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEE
Confidence 887776654
No 80
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.52 E-value=4.7e-13 Score=61.89 Aligned_cols=75 Identities=13% Similarity=0.299 Sum_probs=53.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEec--------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELT--------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|.+.+.|++.+..+. ...++.+... .....+|.|.+++.+|+|.|.|.+.|. +
T Consensus 15 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g 89 (124)
T 3rbg_A 15 EGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH----SANQLSITVPNVTLQDEGVYKCLHYSD-S 89 (124)
T ss_dssp TTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEE----ETTEEEEEESSCCGGGCEEEEEEEESS-S
T ss_pred CCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeC----CCCEEEEEECCCChHHCEEEEEEEEcC-C
Confidence 58999999999999999999997554321 1112222110 011357999999999999999999998 7
Q ss_pred ceeeEEEE
Q psy11826 74 IDRRGFRT 81 (83)
Q Consensus 74 ~~~~~~~~ 81 (83)
.......|
T Consensus 90 ~~~~~~~l 97 (124)
T 3rbg_A 90 VSTKEVKV 97 (124)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEE
Confidence 66655544
No 81
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.52 E-value=1.1e-12 Score=65.06 Aligned_cols=75 Identities=29% Similarity=0.502 Sum_probs=56.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc-cceEEEEEEecCCCeEEEEEEEccCCC-CCCeEEEEEeeCCCcc-eeeE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF-HKYFQVHEWFLGNNTIKSKMEIDPATQ-KDAGYYECVADNPFAI-DRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~-~~~g~y~C~~~~~~g~-~~~~ 78 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.. ......... . .....|.|..++. .|.|.|.|.+.|..|. ....
T Consensus 20 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~--~--~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~ 95 (212)
T 2yd1_A 20 VGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQ--P--GGISILRIEPVRAGRDDAPYECVAENGVGDAVSAD 95 (212)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEE--T--TTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEE
T ss_pred cCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEc--C--CCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEee
Confidence 588999999999999999999999988863 333333221 1 1136799999999 9999999999998877 4444
Q ss_pred EE
Q psy11826 79 FR 80 (83)
Q Consensus 79 ~~ 80 (83)
..
T Consensus 96 ~~ 97 (212)
T 2yd1_A 96 AT 97 (212)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 82
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.52 E-value=7.1e-14 Score=74.59 Aligned_cols=73 Identities=27% Similarity=0.496 Sum_probs=60.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. .+.|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 326 ~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 397 (403)
T 3laf_A 326 ESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVG--------GSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQL 397 (403)
T ss_dssp TTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEET--------TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEec--------CccEEEeccccccCEEEEEEEEcCCceEEEEEEE
Confidence 58889999999999999999999998876654433221 2369999999999999999999999998887766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 398 ~ 398 (403)
T 3laf_A 398 I 398 (403)
T ss_dssp E
T ss_pred E
Confidence 4
No 83
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.51 E-value=5.3e-13 Score=69.07 Aligned_cols=76 Identities=21% Similarity=0.361 Sum_probs=58.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc-eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK-YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...+... .. ..+.|.|.+++.+|.|.|.|.+.|..|.......
T Consensus 18 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (305)
T 2nzi_A 18 YQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEF-KG---GYHQLIIASVTDDDATVYQVRATNQGGSVSGTAS 93 (305)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEE-TT---TEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEEC-CC---CEEEEEEccCChhhCeEEEEEEEcCCCCccceEE
Confidence 68999999999999999999999998876432 2322211 11 1357999999999999999999998887655544
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 94 l 94 (305)
T 2nzi_A 94 L 94 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 84
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.51 E-value=2e-13 Score=76.09 Aligned_cols=75 Identities=24% Similarity=0.378 Sum_probs=60.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.......+... ....+|.|.++..+|.|.|.|.+.|..|.......|
T Consensus 398 ~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 472 (570)
T 3b43_A 398 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE-----NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472 (570)
T ss_dssp TTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEE-----TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEc-----CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 588999999999999999999999998876554443221 113479999999999999999999999987765544
No 85
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.51 E-value=2.6e-13 Score=76.02 Aligned_cols=76 Identities=24% Similarity=0.371 Sum_probs=64.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.+.|.+.|.|.|.+.|++++..+....+..+... + ...+|.|..+.+.|.|.|+|.+.|..|...+...|
T Consensus 496 ~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~--~---~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l 570 (573)
T 3uto_A 496 EGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYN--G---NDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 570 (573)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEE--T---TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEc--C---CEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEE
Confidence 588999999999999999999999999987766655431 2 24579999999999999999999999999888776
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 571 ~ 571 (573)
T 3uto_A 571 N 571 (573)
T ss_dssp E
T ss_pred E
Confidence 5
No 86
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.51 E-value=4.8e-13 Score=68.93 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=58.6
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEe----cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIEL----TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+.|.|. +.|++++..+ .......... .......+.|.|.+++.+|.|.|.|.+.|..|...
T Consensus 202 ~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~ 279 (290)
T 2o26_X 202 KGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRG--DFNYERQETLTISSARVDDSGVFMCYANNTFGSAN 279 (290)
T ss_dssp TTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEE--TTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE
T ss_pred cCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccC--ceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEE
Confidence 588999999999999996 9999988663 2222111110 00122346899999999999999999999999987
Q ss_pred eEEEEe
Q psy11826 77 RGFRTD 82 (83)
Q Consensus 77 ~~~~~~ 82 (83)
....|.
T Consensus 280 ~~~~l~ 285 (290)
T 2o26_X 280 VTTTLK 285 (290)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 777664
No 87
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.51 E-value=8.5e-13 Score=65.50 Aligned_cols=76 Identities=33% Similarity=0.534 Sum_probs=57.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccC-CCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPA-TQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+....... ...... ....|.|.++ +.+|.|.|.|.+.|..|.....+.
T Consensus 20 ~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~-~~~~~~---~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~ 95 (212)
T 2yd6_A 20 SGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEV-IEFDDG---SGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTR 95 (212)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEE-EEEGGG---TEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEE
T ss_pred cCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeE-EEEcCC---CceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEE
Confidence 58899999999999999999999998876543221 111111 1457999999 599999999999998887655544
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 96 l 96 (212)
T 2yd6_A 96 L 96 (212)
T ss_dssp E
T ss_pred E
Confidence 3
No 88
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.51 E-value=2.9e-13 Score=66.81 Aligned_cols=75 Identities=21% Similarity=0.425 Sum_probs=55.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|..+.+.|.+.+.|.|.+.|++++..+....... ........+.|.|..+...|.|.|.|.+.|..|.....+.
T Consensus 132 ~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~----~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t 206 (218)
T 4frw_A 132 QGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFK----HSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRIT 206 (218)
T ss_dssp CCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEE----CSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred eccccceeeeccCCcCceEEEEECCcccccCceEe----cCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEE
Confidence 46778999999999999999999886554322111 1122233567999999999999999999999887654443
No 89
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.51 E-value=6.9e-14 Score=74.39 Aligned_cols=75 Identities=25% Similarity=0.445 Sum_probs=57.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEeccc-----ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELTFH-----KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.|.|.|.+.|+++ +..+... .+..+.. ....+.|.|.+++.+|.|.|.|.+.|..|.
T Consensus 14 ~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 88 (389)
T 2jll_A 14 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG-----QHGSSSLHIKDVKLSDSGRYDCEAASRIGG 88 (389)
T ss_dssp TTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEE-----CSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred CCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEec-----cCCcceEEEcccChhhCEEEEEEEEeCCCC
Confidence 589999999999999999999998 8776542 2222211 112468999999999999999999999988
Q ss_pred eeeEEEE
Q psy11826 75 DRRGFRT 81 (83)
Q Consensus 75 ~~~~~~~ 81 (83)
....+.|
T Consensus 89 ~~~~~~l 95 (389)
T 2jll_A 89 HQKSMYL 95 (389)
T ss_dssp EEEEEEE
T ss_pred cceEEEE
Confidence 7665554
No 90
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=2.3e-13 Score=61.32 Aligned_cols=64 Identities=20% Similarity=0.417 Sum_probs=49.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+ +.|.+.+.|++++..+... ..+.+.. ... ...|.|.+++.+|.|.|.|.+.+.
T Consensus 30 ~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~--~~~---~~~L~I~~v~~~D~G~Y~C~a~~~ 94 (104)
T 1pd6_A 30 KGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFES--IGA---KRTLTISQCSLADDAAYQCVVGGE 94 (104)
T ss_dssp TTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEE--ETT---EEEEEECSCSSSSCEEEEEEETTE
T ss_pred cCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEe--cCC---EEEEEECCCCcccCEEEEEEECCC
Confidence 58899999998 7888899999999888765 4333321 111 347999999999999999999553
No 91
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.50 E-value=6e-13 Score=65.17 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=55.2
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccce--EEEEEEecCCCeE--EEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKY--FQVHEWFLGNNTI--KSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+. +.|.+.+.|++++..+..... ..+.......... .+.|.|.+++.+|.|.|.|.+.+..+..
T Consensus 16 ~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (195)
T 2c5d_C 16 RGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTF 94 (195)
T ss_dssp TTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred cCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCce
Confidence 689999999998 899999999999988876532 2221111111122 4689999999999999999999877653
No 92
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.50 E-value=4.5e-14 Score=69.20 Aligned_cols=72 Identities=28% Similarity=0.427 Sum_probs=57.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....... .. ...|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 127 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~-----~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 127 MGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIS-----TS----GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEE-----TT----TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCcEEEEEEccCCCCCceEEEeCCCcCCCceeec-----CC----CCEEEEccCChhhCEEEEEEEEecCCceeeeEEE
Confidence 57889999999999999999999998665432211 01 2379999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 198 ~ 198 (201)
T 3s97_C 198 Y 198 (201)
T ss_dssp E
T ss_pred E
Confidence 3
No 93
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.50 E-value=2.3e-12 Score=64.82 Aligned_cols=81 Identities=22% Similarity=0.491 Sum_probs=60.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEe----CCEEecccce--EEEE-EEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK----DDIELTFHKY--FQVH-EWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~----~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.|.+.|++ ++..+..... .... ..........+.|.|..+..+|.|.|.|.+.|..|.
T Consensus 128 ~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~ 207 (241)
T 3grw_A 128 LGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGV 207 (241)
T ss_dssp TTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcce
Confidence 58889999999999999999999 7766643321 1111 111222334568999999999999999999999998
Q ss_pred eeeEEEEe
Q psy11826 75 DRRGFRTD 82 (83)
Q Consensus 75 ~~~~~~~~ 82 (83)
....+.|.
T Consensus 208 ~~~~~~l~ 215 (241)
T 3grw_A 208 AEKAFWLS 215 (241)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 87776654
No 94
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.50 E-value=2.7e-13 Score=67.32 Aligned_cols=70 Identities=30% Similarity=0.503 Sum_probs=53.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc---eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK---YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ...... .. ..+.|.|..++.+|.|.|.|.+.|..|...
T Consensus 122 ~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~--~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 194 (212)
T 2yd6_A 122 RTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLR--SE---SIGALQIEQSEESDQGKYECVATNSAGTRY 194 (212)
T ss_dssp TTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEE--ET---TEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEe--cC---CeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence 47889999999999999999999998876532 221111 01 146799999999999999999999998754
No 95
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.50 E-value=8.4e-13 Score=65.75 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=52.4
Q ss_pred CCCceEEEEeEeCc-cCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 1 MLGRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 1 ~~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
+.|+.+.|.|.+.+ .|.|.+.|++++..+.......+.. .......+|.|.+++.+|+|.|.|.+.|.
T Consensus 15 ~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~---~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng 83 (207)
T 3rbs_A 15 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHI---DRNTGIIEMFMEKLQDEDEGTYTFQLQDG 83 (207)
T ss_dssp CGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEE---CTTTCEEEEEESCCCGGGCEEEEEEEEET
T ss_pred EeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEE---eCCCCEEEEEECCCChhhCEEEEEEEECC
Confidence 35788999999864 7999999999999987655443322 11123457999999999999999999883
No 96
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.50 E-value=1.8e-13 Score=66.66 Aligned_cols=73 Identities=23% Similarity=0.461 Sum_probs=57.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.......... . ...|.|.+++.+|.|.|.|.+.+..+.......|
T Consensus 18 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 90 (192)
T 2va4_A 18 RGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG---S----NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 90 (192)
T ss_dssp SCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEET---T----TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeC---C----eeEEEEecCChhcCcEEEEEEEccccccceEEEE
Confidence 58999999999999999999999998887654433211 1 1369999999999999999999988766554433
No 97
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.50 E-value=9.2e-14 Score=68.94 Aligned_cols=67 Identities=27% Similarity=0.656 Sum_probs=54.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... ...... ...|.|..++.+|.|.|.|.+.|..|....
T Consensus 124 ~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s 191 (212)
T 2yd1_A 124 VGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK---------DGFLQIENSREEDQGKYECVAENSMGTEHS 191 (212)
T ss_dssp TTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE---------TTEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred cCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc---------CCeEEEccCChhhCEEEEEEeecCCCceeE
Confidence 4888999999999999999999999887653 222111 127999999999999999999999998753
No 98
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.49 E-value=2.2e-13 Score=72.54 Aligned_cols=71 Identities=25% Similarity=0.446 Sum_probs=59.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... +.... ...|.|.++..+|.|.|.|.+.|..|.....+.|
T Consensus 323 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~---------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 392 (395)
T 1bih_A 323 QGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT---------DSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLV 392 (395)
T ss_dssp TTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE---------TTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE---------CCEEEEeeCCcccCEEEEEEEEccCCCceEEEEE
Confidence 5889999999999999999999999887654 22221 1279999999999999999999999998877766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 393 ~ 393 (395)
T 1bih_A 393 Q 393 (395)
T ss_dssp E
T ss_pred E
Confidence 4
No 99
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.7e-14 Score=63.86 Aligned_cols=63 Identities=16% Similarity=0.364 Sum_probs=49.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc----eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK----YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+.+.| +.+.|++++..+.... ++.+.. . .....|.|.++..+|.|.|.|.+.|
T Consensus 22 ~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~--~---~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 22 VGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKK--D---GKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp SSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEE--C---SSEEEEECSSCCGGGCSBEEEECSS
T ss_pred CCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEE--C---CCEEEEEECCCChhhCEEEEEEEcC
Confidence 588899999998888 8999999998776544 223221 1 1245799999999999999999987
No 100
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.49 E-value=2.4e-13 Score=66.41 Aligned_cols=74 Identities=23% Similarity=0.336 Sum_probs=56.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...... . .....|.|.+++.+|.|.|.|.+.+..+......
T Consensus 19 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 93 (194)
T 2a38_A 19 EGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISF--S---DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTA 93 (194)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEE--E---TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEe--C---CCEEEEEECCCCcccCEEEEEEEEcCCceEeEEE
Confidence 58899999999999999999999988776432 222211 0 1135799999999999999999998887665544
Q ss_pred E
Q psy11826 80 R 80 (83)
Q Consensus 80 ~ 80 (83)
.
T Consensus 94 ~ 94 (194)
T 2a38_A 94 E 94 (194)
T ss_dssp E
T ss_pred E
Confidence 3
No 101
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.49 E-value=8.6e-13 Score=59.97 Aligned_cols=60 Identities=20% Similarity=0.365 Sum_probs=47.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.+.|.|.+.+. |.+.|++++..+....+..+... . ....|.|.++..+|.|.|.|.+
T Consensus 33 ~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 33 EGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQD--G---ARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp TTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEE--T---TEEEEEECSCCSTTCEEEEEEE
T ss_pred CCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEEC--C---CEEEEEECCCChhhCEEEEEEe
Confidence 58899999998765 68999999988876555444321 1 1357999999999999999999
No 102
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.48 E-value=8.4e-13 Score=65.69 Aligned_cols=80 Identities=19% Similarity=0.279 Sum_probs=55.9
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCCEEecccce-EEEEEEecCC---CeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDDIELTFHKY-FQVHEWFLGN---NTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|. +.+.|++++..+..... ... ...... ....+.|.|.+++.+|+|.|.|.+.|..|..
T Consensus 119 ~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 197 (213)
T 2x1w_L 119 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRD-LKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK 197 (213)
T ss_dssp TTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEE-ECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred CCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccc-cccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcE
Confidence 5899999999988553 57999998875433211 000 000000 2335689999999999999999999999987
Q ss_pred eeEEEEe
Q psy11826 76 RRGFRTD 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
.....|.
T Consensus 198 ~~~~~l~ 204 (213)
T 2x1w_L 198 KNSTFVR 204 (213)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7666553
No 103
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.48 E-value=1e-13 Score=75.79 Aligned_cols=76 Identities=26% Similarity=0.365 Sum_probs=55.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.+.|.+.|.|.|.+.|++++..+.......... ... ..+|.|..++.+|+|.|.|.+.|..|.......+
T Consensus 399 ~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~--~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l 473 (477)
T 2id5_A 399 EGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLT--VFP---DGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473 (477)
T ss_dssp TTCCEEECCCEEEESCCEEEEECTTSCBC-------CE--ECT---TSCEEESSCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEeccccCCCEEEEEECCccccccCCCceEE--eCC---CCEEEEeeCChHHCEEEEEEEEeCCCcEEEEEEE
Confidence 58899999999999999999999887654321111001 011 1259999999999999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 474 ~ 474 (477)
T 2id5_A 474 H 474 (477)
T ss_dssp E
T ss_pred E
Confidence 3
No 104
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.48 E-value=8.9e-13 Score=71.55 Aligned_cols=75 Identities=17% Similarity=0.103 Sum_probs=55.5
Q ss_pred CCCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 1 MLGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.+|+.+.|.|.+.+.|.|.+.|++++..+....... .......+|.|.+++.+|+|.|.|.+.|..|.....+.
T Consensus 61 ~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~------~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 134 (423)
T 3qs7_E 61 DVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFD------LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFT 134 (423)
T ss_dssp CSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEE
T ss_pred ecCCcEEEEEEEEcCCCCeEEEEECCCccCccceec------cccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEE
Confidence 368999999999999999999999987765432211 11112346999999999999999999999988766655
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 135 l 135 (423)
T 3qs7_E 135 V 135 (423)
T ss_dssp E
T ss_pred E
Confidence 4
No 105
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.48 E-value=7.7e-13 Score=67.90 Aligned_cols=75 Identities=28% Similarity=0.394 Sum_probs=58.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+........... . ....|.|.+++.+|.|.|.|.+.|..|.......|
T Consensus 19 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l 93 (284)
T 2rik_A 19 LGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLV--E---NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL 93 (284)
T ss_dssp TTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEE--T---TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEc--C---CEEEEEEecCCcccCEEEEEEEEECCceEEEEEEE
Confidence 588999999999999999999999988876544333211 1 13579999999999999999999988876554443
No 106
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.48 E-value=8.3e-13 Score=73.61 Aligned_cols=76 Identities=17% Similarity=0.259 Sum_probs=60.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc-cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF-HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.. .....+. .......|.|..++.+|+|.|.|.+.|..|.......
T Consensus 491 ~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~ 565 (570)
T 3b43_A 491 VGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWIS-----YSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFAT 565 (570)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEEC-----CCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEE-----ECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEE
Confidence 588899999999999999999999865543 3332221 1112468999999999999999999999999988877
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 566 L~ 567 (570)
T 3b43_A 566 LS 567 (570)
T ss_dssp EC
T ss_pred EE
Confidence 75
No 107
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.48 E-value=3.5e-13 Score=66.49 Aligned_cols=73 Identities=25% Similarity=0.548 Sum_probs=56.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee-EEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR-GFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~-~~~ 80 (83)
.|+.+.|.|.+.+.| |.+.|++++..+.......... . ...|.|..+..+|.|.|.|.+.|..|.... .+.
T Consensus 124 ~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~---~----~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~ 195 (208)
T 3r4d_A 124 ELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQ---N----NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIK 195 (208)
T ss_dssp TTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEET---T----TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEE
T ss_pred eCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcC---C----CCEEEEeccCHHhCeEEEEEEecCCCcccCCcee
Confidence 588999999998866 7999999998887654433221 1 146999999999999999999999987644 444
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 196 l~ 197 (208)
T 3r4d_A 196 LD 197 (208)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 108
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.48 E-value=2e-13 Score=71.36 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=57.7
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEecccceEEEEEEecCCCeEEEEEEEc-cCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEID-PATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+.|.|. +.|++++..+....... ...|.|. .+..+|.|.|.|.+.|..|.....+
T Consensus 246 ~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~-----------~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~ 314 (331)
T 3u83_A 246 QRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQ-----------NRTLFFKGPINYSLAGTYICEATNPIGTRSGQV 314 (331)
T ss_dssp TCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEE-----------TTEEEECSCCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEeCcCCCCCCEEEEEECCCcccccceec-----------CcEEEEeCCCccccCeEEEEEEEeccccceEEE
Confidence 588999999999999998 99999988776542111 2368999 8999999999999999999887777
Q ss_pred EEe
Q psy11826 80 RTD 82 (83)
Q Consensus 80 ~~~ 82 (83)
.|.
T Consensus 315 ~l~ 317 (331)
T 3u83_A 315 EVN 317 (331)
T ss_dssp EEC
T ss_pred EEE
Confidence 664
No 109
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.48 E-value=4e-13 Score=71.69 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=58.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+........... ....|.|..+..+|.|.|.|.+.|..|.....+.|
T Consensus 326 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 399 (404)
T 3p3y_A 326 PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREV------AGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFV 399 (404)
T ss_dssp TTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEE------ETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEE
T ss_pred cCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEe------cCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEE
Confidence 588999999999999999999999998865431100000 02379999999999999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 400 ~ 400 (404)
T 3p3y_A 400 S 400 (404)
T ss_dssp E
T ss_pred E
Confidence 3
No 110
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=9.7e-14 Score=62.52 Aligned_cols=65 Identities=20% Similarity=0.218 Sum_probs=50.2
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+.|.+ .+.|++++..+....++.+... . ...+|.|.++..+|+|.|.|.+.+.
T Consensus 22 ~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a~~~ 87 (104)
T 2eny_A 22 EGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ--G---RKYILVVREAAPSDAGEVVFSVRGL 87 (104)
T ss_dssp SSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEE--T---TEEEEEECSCCTTTCSCEEEEETTE
T ss_pred CCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEc--C---CEEEEEECCCCHHHCEEEEEEECCe
Confidence 58899999999887754 7999999988876554443221 1 1357999999999999999988664
No 111
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.47 E-value=4.2e-12 Score=72.95 Aligned_cols=80 Identities=24% Similarity=0.526 Sum_probs=63.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+...................+.|.|..+..+|.|.|.|.+.|..|.......|
T Consensus 443 ~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 522 (816)
T 3dmk_A 443 PGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKL 522 (816)
T ss_dssp SSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEE
Confidence 58889999999999999999999999887655544433323334445679999999999999999999998877665544
No 112
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.47 E-value=3.8e-13 Score=65.47 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=53.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... ...|.|..++.+|.|.|.|.+.|..+.....+.|
T Consensus 111 ~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~---------------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 175 (184)
T 2ny1_B 111 QGQSLTLTLESPPGSSPSVQCRSPRGKNIQG---------------GKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDI 175 (184)
T ss_dssp TTCCEEEEEECCTTCCCEEEEECTTSCEEEE---------------SSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCEEEEEEcCCCCCCEEEEEeCCCccccC---------------ceEEEEecCCcCCCeEEEEEEEECCceEEEEEEE
Confidence 5889999999988999999999987544111 2479999999999999999999988877666554
No 113
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.46 E-value=1.3e-13 Score=67.52 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=49.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+ |.|.+.|++++..+..... ....|.|..+..+|.|.|.|.+.|..|..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~------------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGSIISPLNA------------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTEECCCSSC------------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC---CCCeEEEEECCEECcccCC------------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 68899999997 8899999999998764321 12368889999999999999999998866
No 114
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=2.6e-12 Score=62.29 Aligned_cols=70 Identities=20% Similarity=0.399 Sum_probs=55.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.......... ........|.|.+++.+|.|.|.|.+.+..+.
T Consensus 16 ~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 85 (182)
T 1rhf_A 16 QGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPV---SEQHWIGFLSLKSVERSDAGRYWCQVEDGGET 85 (182)
T ss_dssp TTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEE---ETTEEEEEEEESSCCGGGCEEEEEEESSCTTC
T ss_pred CCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEe---cCCCceEEEEEeecCcccCeEEEEEEEcCCCc
Confidence 58899999999999999999999998887654332221 12333568999999999999999999987664
No 115
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.46 E-value=4.9e-13 Score=73.65 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|. +.|++++..+...................+.|.|.+++.+|.|.|.|.+.|..|.....+.
T Consensus 327 ~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 327 DGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp TTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEE
Confidence 588999999999999999 9999999877654321111000111224578999999999999999999999998766665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 407 l~ 408 (524)
T 2ec8_A 407 VY 408 (524)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 116
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.46 E-value=4e-13 Score=60.15 Aligned_cols=63 Identities=16% Similarity=0.372 Sum_probs=48.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+.+.|.+ +.|++++..+.......+.. ......|.|.+++.+|+|.|.|.+.+
T Consensus 22 ~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~~g~ 84 (103)
T 2e7b_A 22 EGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQ-----EGAMLELVVRNLRPQDSGRYSCSFGD 84 (103)
T ss_dssp SSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEE-----CSSEEEEEECSCCTTTCCCEEEECSS
T ss_pred CCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEE-----cCCEEEEEEccCCcccCEEEEEEECC
Confidence 58899999999999988 99999988776544444322 11245799999999999999998433
No 117
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.46 E-value=4.6e-13 Score=66.79 Aligned_cols=59 Identities=25% Similarity=0.436 Sum_probs=51.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+..... ..|.|..++.+|.|.|.|.+.|..|.
T Consensus 132 ~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~a~n~~g~ 190 (218)
T 3k0w_A 132 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK--------------KLYMVPYVDLEHQGTYWCHVYNDRDS 190 (218)
T ss_dssp TTCCEEEECEEEBSSCCEEEEEETTEECTTCCS--------------SEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CCCcEEEEEEecccCCCeEEEEECCEECCCCCC--------------CEEEEeecChhcCEEEEEEEEcCCCC
Confidence 578899999999999999999999987765431 36899999999999999999998876
No 118
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=6.8e-13 Score=59.31 Aligned_cols=64 Identities=27% Similarity=0.465 Sum_probs=50.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+. .|.+.+.|++++..+.......+... . ....|.|.+++.+|.|.|.|.+.+.
T Consensus 25 ~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~--~---~~~~L~I~~~~~~D~G~Y~C~a~~~ 88 (102)
T 2eo1_A 25 AGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAV--G---CTRRLVVQQAGQAEAGEYSCEAGGQ 88 (102)
T ss_dssp TTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEE--T---TEEEEEETTCCTTTCSCEEEEETTE
T ss_pred CCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEc--C---CEEEEEECCCCcccCEEEEEEcCCC
Confidence 588999999987 88899999999998876554433221 1 1357999999999999999998654
No 119
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=9.5e-13 Score=58.92 Aligned_cols=60 Identities=23% Similarity=0.423 Sum_probs=47.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|. .+.|.+.+.|++++..+....++.+.. .. ....|.|.+++.+|.|.|.|.
T Consensus 22 ~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~--~~---~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 22 EKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQ--EG---LTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp TTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEE--ET---TEEEEEEESCCTTTCSEEEEE
T ss_pred CCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEe--CC---CEEEEEECCCCcccCEEEEEE
Confidence 5889999999 588899999999998877655444321 11 134799999999999999998
No 120
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.46 E-value=8.4e-14 Score=69.15 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=54.2
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+ .+.|.|.+.|++++..+.....................|.|..++.+|.|.|.|.+.|..|.....
T Consensus 122 ~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 199 (217)
T 2vr9_A 122 KGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESS 199 (217)
T ss_dssp TTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred CCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccc
Confidence 58889999998 899999999999998877422111000000000001369999999999999999999999876543
No 121
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.45 E-value=8.9e-13 Score=68.38 Aligned_cols=70 Identities=23% Similarity=0.429 Sum_probs=54.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....... .....|.+..+ +|+|.|.|.+.|..|.......|
T Consensus 219 ~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~---------~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l 287 (304)
T 2yd9_A 219 PGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP---------VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQI 287 (304)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC---------BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc---------CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEE
Confidence 58899999999999999999999998876543211 11235666655 68999999999999988777766
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 288 ~ 288 (304)
T 2yd9_A 288 T 288 (304)
T ss_dssp C
T ss_pred E
Confidence 4
No 122
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=3.5e-14 Score=64.90 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=48.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. .......|.|.++..+|+|.|.|.+.
T Consensus 27 ~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~~g 90 (115)
T 2cr6_A 27 EGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDA----QPGGYHVLTLRQLALKDSGTIYFEAG 90 (115)
T ss_dssp TTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCC----BTTTBCCBEECSCCTTTCEEEEEEET
T ss_pred CCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEE----cCCCEEEEEEcCCChhhCEEEEEEEC
Confidence 58899999999999999999999998876544322210 01113469999999999999999843
No 123
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.45 E-value=1.2e-13 Score=67.35 Aligned_cols=66 Identities=32% Similarity=0.589 Sum_probs=54.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.+.|.+.+.|.+.+.|++++..+.......... ...|.|..+..+|.|.|.|.+.|..|..
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~--------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 179 (192)
T 2iep_A 114 EGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLE--------SGSLRIHNVQKEDAGQYRCVAKNSLGTA 179 (192)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECT--------TSCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEec--------CCcEEEecCChhhCEEEEEEEEcCCCcE
Confidence 57889999999999999999999998877654332211 1269999999999999999999998876
No 124
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.45 E-value=2e-12 Score=67.88 Aligned_cols=80 Identities=13% Similarity=0.126 Sum_probs=58.8
Q ss_pred CCceEEEEeEeCccC---CC-eEEEEeCCEEe-cccceEEEEEEecCCCeEEEEEEEccCCCCCCe-EEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFP---RP-HITWTKDDIEL-TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG-YYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~---~~-~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g-~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.| .| .+.|++++..+ ........... .......+.|.|.+++.+|.| .|.|.+.|..|..
T Consensus 242 ~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~ 320 (329)
T 3oq3_B 242 IGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILT-SSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320 (329)
T ss_dssp TTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEE-EETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEE
T ss_pred cCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeec-ccCceeEeEEEEEeccHHHCCCcEEEEEEecCCce
Confidence 588999999999987 77 88999998774 32222111111 111234678999999999999 9999999999988
Q ss_pred eeEEEEe
Q psy11826 76 RRGFRTD 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
.....|.
T Consensus 321 ~~~~~l~ 327 (329)
T 3oq3_B 321 TLTTTVV 327 (329)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7766553
No 125
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.45 E-value=3.6e-13 Score=66.50 Aligned_cols=67 Identities=28% Similarity=0.521 Sum_probs=53.9
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEecccce-EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFHKY-FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.+.|.+ .+.|.|.+.|++++..+..... .... ...|.|..++.+|.|.|.|.+.|..|....
T Consensus 125 ~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~---------~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s 193 (212)
T 2v9r_A 125 VGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR---------GGKLMITYTRKSDAGKYVCVGTNMVGERES 193 (212)
T ss_dssp TTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE---------TTEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc---------CCeEEEeeCCHhhCeeEEEEEecccCceec
Confidence 57889999998 8899999999999988875432 2111 136999999999999999999999887543
No 126
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.44 E-value=2.3e-13 Score=67.90 Aligned_cols=76 Identities=20% Similarity=0.376 Sum_probs=56.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+............. ....|.|.+++.+|.|.|.|.+.+..+.......+
T Consensus 33 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 108 (231)
T 3ojm_B 33 AANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRN----QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 108 (231)
T ss_dssp TTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEG----GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCEEEEEecccCCCCeEEEEECCccccccccccceeeec----CcceEEEecCCcccCEEEEEEEecccCcccccEEE
Confidence 58999999999999999999999998876543211000000 02369999999999999999999988776554443
No 127
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.44 E-value=8e-12 Score=59.07 Aligned_cols=75 Identities=12% Similarity=0.208 Sum_probs=51.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE--------EecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI--------ELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.+.+.+.|++.+. ......++..... .....+|.|.+++.+|+|.|.|.+.|. +
T Consensus 52 ~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~----~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~ 126 (145)
T 1z9m_A 52 AGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTS----TPHELSISISNVALADEGEYTCSIFTM-P 126 (145)
T ss_dssp TTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEE----CSSEEEEEECSCCGGGCEEEEEEECSS-S
T ss_pred cCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecC----CCCeEEEEECCCChhhCEEEEEEEEcC-C
Confidence 58999999999998888999994221 1111122222111 111357999999999999999999998 7
Q ss_pred ceeeEEEE
Q psy11826 74 IDRRGFRT 81 (83)
Q Consensus 74 ~~~~~~~~ 81 (83)
.......|
T Consensus 127 ~~~~~~~L 134 (145)
T 1z9m_A 127 VRTAKSLV 134 (145)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEE
Confidence 66555444
No 128
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.44 E-value=5.9e-12 Score=62.62 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=50.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC-CEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD-DIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.+.|.+.|.|.|.+.|+++ +..+...................+.+ .+...|.|.|.|.+.|..|.......
T Consensus 130 ~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l---~v~~~d~g~Y~C~a~n~~g~~~~~~~ 206 (222)
T 3sbw_C 130 VTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTL---RINTTTNEIFYCTFRRLDPEENHTAE 206 (222)
T ss_dssp TTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEE---EEECCTTCEEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEE---EEeccCCcEEEEEEEeCccceeeEEE
Confidence 578899999999999999999998 55554332211111101111112233 34568899999999999998777665
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 207 l~ 208 (222)
T 3sbw_C 207 LV 208 (222)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 129
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.44 E-value=1.8e-12 Score=67.27 Aligned_cols=73 Identities=21% Similarity=0.362 Sum_probs=56.4
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+. |.+.+.|++++..+......... .....|.|.+++.+|.|.|.|.+.|..|.....+.
T Consensus 20 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~-------~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 92 (317)
T 2y25_A 20 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK-------DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 92 (317)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC------------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEEC
T ss_pred CCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE-------CCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEE
Confidence 58999999998877 77899999999888754433221 11358999999999999999999998887665554
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 93 l 93 (317)
T 2y25_A 93 L 93 (317)
T ss_dssp C
T ss_pred E
Confidence 3
No 130
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.44 E-value=2.5e-12 Score=66.70 Aligned_cols=76 Identities=28% Similarity=0.570 Sum_probs=50.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCC-CCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ-KDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ...... .......|.|.++.. +|.|.|.|.+.|..|.......
T Consensus 20 ~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~-~~~~~~---~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 95 (304)
T 2yd9_A 20 SGGVASFVCQATGDPKPRVTWNKKGKKVNSQR-FETIEF---DESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAK 95 (304)
T ss_dssp TTSCEEEEEEEECSSCCEEEEC-------CTT-EEEEEE---TTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEE
T ss_pred CCCeEEEEEEEEEeCCCeEEEEECCEECCCCc-eEEEEe---cCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEE
Confidence 58899999999999999999999988775432 222211 111135799999998 9999999999998887544443
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 96 l 96 (304)
T 2yd9_A 96 L 96 (304)
T ss_dssp E
T ss_pred E
Confidence 3
No 131
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=7.3e-13 Score=70.58 Aligned_cols=71 Identities=17% Similarity=0.274 Sum_probs=54.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc----eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK----YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.+.|.+.| |.|.+.|++++..+.... +... . ..+|.|.+++.+|+|.|+|.+.|..|....
T Consensus 260 ~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~--------~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~ 329 (361)
T 2xot_A 260 LGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-R--------NGDLFFKKVQVEDGGVYTCYAMGETFNETL 329 (361)
T ss_dssp TTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-E--------TTEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred CCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-e--------cCeEEEeecCcccCEEEEEEEecCCCccEE
Confidence 5889999999988 999999999765443211 2222 1 236999999999999999999999988777
Q ss_pred EEEEe
Q psy11826 78 GFRTD 82 (83)
Q Consensus 78 ~~~~~ 82 (83)
.+.+.
T Consensus 330 ~~~l~ 334 (361)
T 2xot_A 330 SVELK 334 (361)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66553
No 132
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=67.45 Aligned_cols=76 Identities=24% Similarity=0.437 Sum_probs=56.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.............. ...|.|.+++.+|.|.|.|.+.+..+.......+
T Consensus 29 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l 104 (241)
T 3grw_A 29 AANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ----QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 104 (241)
T ss_dssp TTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGG----GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeecc----ceEEEEEeCCcccCEEEEEEEeecCCceEEEEEE
Confidence 589999999999999999999999988765432110000001 2369999999999999999999988776554443
No 133
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=5.3e-12 Score=57.64 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=47.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc----------eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK----------YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|.+.+ .|.+.|+++|..+.... +..+. ......+|.|.++..+|+|.|.|...+
T Consensus 22 eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~-----~~g~~~~L~I~~v~~~D~G~Y~~~~~~ 93 (112)
T 2e6q_A 22 DGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIE-----QKGLQHRLILHAVKHQDSGALVGFSCP 93 (112)
T ss_dssp TTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEEC-----CBTTEEEEEEESCCSTTCSEEEEEEET
T ss_pred CCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEE-----eCCcEEEEEECCCCHHHCccEEEEEEC
Confidence 5899999999987 77899999999887664 43331 112245899999999999999775444
No 134
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.43 E-value=2.7e-13 Score=68.45 Aligned_cols=81 Identities=19% Similarity=0.131 Sum_probs=54.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceE--EEEEEe----------c-CCCe---EEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYF--QVHEWF----------L-GNNT---IKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~--~~~~~~----------~-~~~~---~~~~l~i~~~~~~~~g~y~ 65 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+...... ...... . .... ....|.|..++.+|.|.|.
T Consensus 150 ~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 229 (250)
T 2fbo_J 150 EGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVW 229 (250)
T ss_dssp TTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEE
T ss_pred CCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEE
Confidence 4889999999999999999999988766542211 000000 0 0000 1147999999999999999
Q ss_pred EEeeCCC---cceeeEEEEe
Q psy11826 66 CVADNPF---AIDRRGFRTD 82 (83)
Q Consensus 66 C~~~~~~---g~~~~~~~~~ 82 (83)
|.+.|.. |.....+.|.
T Consensus 230 C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 230 CELATGQGELDADRSSTILK 249 (250)
T ss_dssp EEEESSSSGGGEEEEEEEEE
T ss_pred EEecCCccccCccceeEEEe
Confidence 9999954 4555555443
No 135
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.43 E-value=8.2e-13 Score=64.42 Aligned_cols=66 Identities=20% Similarity=0.352 Sum_probs=52.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ..... . ...|.|..++.+|.|.|.|.+.|..+..
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~----~----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 181 (191)
T 1epf_A 114 EGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL----S----NNYLQIRGIKKTDEGTYRCEGRILARGE 181 (191)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEEC----T----TSCEEETTCCGGGCEEEEEEEEEGGGTE
T ss_pred CCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEe----c----CCeEEECCCChhhCEEEEEEEEEeccee
Confidence 58889999999999999999999998876432 22111 1 1269999999999999999999988644
No 136
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.43 E-value=2.6e-12 Score=68.36 Aligned_cols=75 Identities=24% Similarity=0.438 Sum_probs=58.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...+.. . ...+.|.|..+...|.|.|.|.+.|..|......
T Consensus 114 ~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~--~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 188 (389)
T 2jll_A 114 EGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYS--T---GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEY 188 (389)
T ss_dssp TTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEE--C---SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEE
T ss_pred cCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEec--c---CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEE
Confidence 58889999999999999999999998887543 222211 1 1135799999999999999999999998866554
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.+
T Consensus 189 ~l 190 (389)
T 2jll_A 189 IL 190 (389)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 137
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.42 E-value=1.3e-12 Score=65.15 Aligned_cols=80 Identities=21% Similarity=0.320 Sum_probs=57.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEe----CCEEecccce--EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK----DDIELTFHKY--FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.|.+.|++ ++..+..... ..............+.|.|..+..+|.|.|.|.+.|..|..
T Consensus 132 ~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 211 (231)
T 3ojm_B 132 VGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQA 211 (231)
T ss_dssp TTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceE
Confidence 47889999999999999999998 7766543321 11111111111223469999999999999999999999987
Q ss_pred eeEEEE
Q psy11826 76 RRGFRT 81 (83)
Q Consensus 76 ~~~~~~ 81 (83)
...+.|
T Consensus 212 ~~~~~l 217 (231)
T 3ojm_B 212 NQSAWL 217 (231)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 666655
No 138
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.42 E-value=1.6e-12 Score=63.45 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=53.6
Q ss_pred CceEEEEeEeCccCC--CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 3 GRKITFFCMAEGFPR--PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 3 g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
|+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.+++.+|.|.|.|.+.+. +.....+.
T Consensus 18 G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~ 86 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA----------SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANAT 86 (190)
T ss_dssp SSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC----------SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEE
T ss_pred CceEEEEEEeccCCCCceEEEEEECCEECcccceEe----------ccEEEEEecCCcccCEEEEEEEEeC-CcccccEE
Confidence 899999999988876 7899999998876543211 1367999999999999999999988 65554444
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 87 l 87 (190)
T 2wv3_A 87 I 87 (190)
T ss_dssp E
T ss_pred E
Confidence 3
No 139
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.42 E-value=1e-11 Score=67.47 Aligned_cols=70 Identities=19% Similarity=0.339 Sum_probs=51.6
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEEecccceEEEEEEecCC-CeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEWFLGN-NTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+ .|.|.+.|++++..+............... ......|.|..++.+|+|.|.|.+.|.
T Consensus 241 ~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 241 VGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp TTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 5889999999988 677999999999877554322211111111 222357999999999999999999998
No 140
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.42 E-value=7.1e-13 Score=64.59 Aligned_cols=67 Identities=19% Similarity=0.401 Sum_probs=50.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc--cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF--HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.. ....... . ...|.|..++.+|.|.|.|.+.|..+...
T Consensus 110 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~----~----~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 178 (189)
T 2v44_A 110 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----A----NNNLQILNINKSDEGIYRCEGRVEARGEI 178 (189)
T ss_dssp TTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC----T----TSCEEETTCCGGGCEEEEEEEEETTTTEE
T ss_pred CCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe----c----CCcEEEEEcCcccCeEEEEEEEccccCce
Confidence 578899999999999999999998876653 2222111 1 12699999999999999999999886554
No 141
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.42 E-value=5.8e-12 Score=62.71 Aligned_cols=78 Identities=17% Similarity=0.314 Sum_probs=55.9
Q ss_pred CCceEEEEeEe-CccCCCeEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+ .+.|.|.+.|++ ++..+......... .......+.|.+..++.+|.|.|.|.+.|..|......
T Consensus 124 ~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~---~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 124 PGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQM---ANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEE---ECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred CCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEE---cCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 57899999998 788999999998 44444432221111 12222234578889999999999999999999887766
Q ss_pred EEe
Q psy11826 80 RTD 82 (83)
Q Consensus 80 ~~~ 82 (83)
.|.
T Consensus 201 ~l~ 203 (222)
T 4i0k_A 201 SVT 203 (222)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 142
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.42 E-value=2e-12 Score=72.66 Aligned_cols=64 Identities=19% Similarity=0.381 Sum_probs=54.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|+++|..+... ..|.|..+..+|.|.|.|.+.|..|.......|
T Consensus 573 ~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~----------------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l 636 (642)
T 1e07_A 573 SGANLNLSCHSASNPSPQYSWRINGIPQQHT----------------QVLFIAKITPNNNGTYACFVSNLATGRNNSIVK 636 (642)
T ss_pred cCCcEEEEEEeccCCCCeEEEEECCEECccC----------------ceEEECcccccCCeEEEEEEEecccCcceeEEE
Confidence 5888999999999999999999999876532 268889999999999999999999987665544
No 143
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=75.09 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=58.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....... .. ...|.|..++.+|+|.|.|.+.|..|.....+.|
T Consensus 340 ~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~-----~~----~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L 410 (527)
T 3qs9_E 340 QYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-----DN----GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTL 410 (527)
T ss_dssp TTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-----SS----SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc-----cC----CcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 57889999999999999999999998886543211 01 2368899999999999999999999987776665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 411 ~ 411 (527)
T 3qs9_E 411 N 411 (527)
T ss_dssp C
T ss_pred E
Confidence 4
No 144
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.41 E-value=4.3e-12 Score=62.99 Aligned_cols=65 Identities=22% Similarity=0.327 Sum_probs=52.4
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+. +.|++++..+.... ..|.|.+++.+|+|.|.|.+.|........+.
T Consensus 21 ~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~---------------~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~ 85 (204)
T 3sgj_C 21 EKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA---------------SSYFIDAATVDDSGEYRCQTQLSTLSDPVQLE 85 (204)
T ss_dssp TTCCEEEEEECCSSSSCCCEEEEETTEEESCCS---------------SEEEESSCCGGGCEEEEEEETTSBCCCCEEEE
T ss_pred CCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc---------------cEEEEecccccCCEEEEEEeCCCcccccEEEE
Confidence 589999999999988776 99999998776542 36999999999999999999886555444444
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 86 V 86 (204)
T 3sgj_C 86 V 86 (204)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.41 E-value=8.2e-13 Score=64.70 Aligned_cols=61 Identities=18% Similarity=0.406 Sum_probs=49.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEcc-CCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDP-ATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+ +. .+.|++++..+.... ..+|.|.+ ++.+|+|.|.|.+.|..|.....
T Consensus 13 ~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~--------------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~ 74 (186)
T 1jbj_A 13 SGTSVELTCPLDS-DE-NLKWEKNGQELPQKH--------------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLY 74 (186)
T ss_dssp ETTEEEEECSSCC-CT-TCEEEETTEEECSCC--------------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEE
T ss_pred CCcEEEEEEeCCC-CC-ceEEEECCEECCCCC--------------CCEEEECCCCccccCEEEEEEEEeCCCcEEEE
Confidence 5899999999877 44 499999998876531 12699999 99999999999999988764433
No 146
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.41 E-value=4.7e-12 Score=65.56 Aligned_cols=75 Identities=27% Similarity=0.400 Sum_probs=58.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEcc-CCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDP-ATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. ......|.|.. +..+|.|.|.|.+.|..|.......
T Consensus 118 ~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 192 (305)
T 2nzi_A 118 RGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV-----TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (305)
T ss_dssp TTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEE-----CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEE-----cCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEE
Confidence 48889999999999999999999988776544433321 01135789998 9999999999999999998766655
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 193 l 193 (305)
T 2nzi_A 193 L 193 (305)
T ss_dssp E
T ss_pred E
Confidence 4
No 147
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.41 E-value=8.3e-12 Score=61.41 Aligned_cols=77 Identities=16% Similarity=0.264 Sum_probs=51.6
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+. +.|.|.+.|++++..+..... .... ...........+..+...|.|.|.|.+.|..+.....+.
T Consensus 120 ~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~-~~~~--~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 120 TSNIRRIICSTSGGFPEPHLSWLENGEELNAINT-TVSQ--DPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp STTEEEEEEEEEEESSCEEEEEEESSCEECCSEE-EEEE--CTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CCCeEEEEEecCCccCCCEEEEEECCEECccccc-eEEe--cCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 367789999984 899999999999987764321 1111 111111111122344568999999999999998887776
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 197 ~ 197 (201)
T 1dr9_A 197 W 197 (201)
T ss_dssp E
T ss_pred c
Confidence 5
No 148
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.40 E-value=4.3e-12 Score=62.90 Aligned_cols=72 Identities=17% Similarity=0.353 Sum_probs=51.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++...... ...... .. ....|.|.+++.+|.|.|.|.+.|..+.....+.|
T Consensus 15 ~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~~~~~~----~~---~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 15 IGDSVSLTCSTTGCESPFFSWRTQIDSPL-NGKVTN----EG---TTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp TTSCEEEEEEEESCSSCEEEEEETTCCCC-SSEEEE----ET---TEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEeecCCCCCeEEEECCCCCCc-cceEEE----cC---CccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 68999999999999999999988431111 111110 01 13469999999999999999999988766555444
No 149
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.40 E-value=1.5e-11 Score=59.89 Aligned_cols=75 Identities=23% Similarity=0.314 Sum_probs=54.5
Q ss_pred CCceEEEEeEeCccC-CCeEEEEe-CCEEecc-cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc-ceee
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTK-DDIELTF-HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA-IDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g-~~~~ 77 (83)
.|+.+.|.|.+.+.+ .+.+.|++ ++..+.. .......... .....|.|.+++.+|.|.|.|.+.+..+ ....
T Consensus 16 ~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 91 (191)
T 1epf_A 16 VGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWND----DDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEA 91 (191)
T ss_dssp TTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEE----TTEEEEEECSCCGGGCEEEEEEEEETTTEEEEE
T ss_pred CCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECC----CCceEEEEccCCcccCEEEEEEEEcCCCcceEE
Confidence 589999999998876 78999999 8777663 2333332211 1135799999999999999999998874 3344
Q ss_pred EEE
Q psy11826 78 GFR 80 (83)
Q Consensus 78 ~~~ 80 (83)
.+.
T Consensus 92 ~~~ 94 (191)
T 1epf_A 92 TVN 94 (191)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 150
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.40 E-value=2.4e-12 Score=64.02 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=52.7
Q ss_pred CCceEEEEeE---eCccCCCeEEEEeCCEEeccc------ceEEEEEEecC------CCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCM---AEGFPRPHITWTKDDIELTFH------KYFQVHEWFLG------NNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~---~~~~~~~~~~w~~~~~~~~~~------~~~~~~~~~~~------~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
+|+.+.|.|. +.+.|.|.+.|++++...... ........... .......|.|.+++.+|+|.|.|
T Consensus 7 ~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (203)
T 4fa8_A 7 LGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLC 86 (203)
T ss_dssp TTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEE
Confidence 6999999995 457899999999865322110 00000000000 00113579999999999999999
Q ss_pred EeeCCCcceeeEEEE
Q psy11826 67 VADNPFAIDRRGFRT 81 (83)
Q Consensus 67 ~~~~~~g~~~~~~~~ 81 (83)
.+.|..|.....+.|
T Consensus 87 ~a~n~~g~~~~~~~l 101 (203)
T 4fa8_A 87 RMKLGETEVTKQEHL 101 (203)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEE
Confidence 999988877666554
No 151
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.40 E-value=1.6e-11 Score=60.67 Aligned_cols=74 Identities=11% Similarity=0.234 Sum_probs=54.0
Q ss_pred CceEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 3 GRKITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
++.+.|.|.+.+. |.+.+.|++++..+.......+... .. ...|.|.+++.+|.|.|.|.+.|..+.....+.+
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~--~~---~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l 91 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVT--GE---QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 91 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEE--TT---EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEe--CC---EEEEEECCCCcccCEEEEEEEecCCcceEEEEEE
Confidence 4556666776664 5789999999998876554443221 11 3569999999999999999999988876655544
No 152
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.40 E-value=1.8e-12 Score=63.86 Aligned_cols=74 Identities=11% Similarity=0.201 Sum_probs=53.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+... .. .........+.+..+..+|.|.|.|.+.|..|.......|
T Consensus 117 ~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~----~~---~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l 189 (202)
T 3bp6_B 117 GTGEVQLTCQARGYPLAEVSWQNVSVPANTS----HI---RTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAII 189 (202)
T ss_dssp TTCCEEEEEEEEEBSCCEEEETTCCSCCEEE----EE---ECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEEEccccCCceEEEEeCCCCccCc----ee---eCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEE
Confidence 5788999999999999999999876543211 00 1111113456677888899999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 190 ~ 190 (202)
T 3bp6_B 190 D 190 (202)
T ss_dssp C
T ss_pred E
Confidence 3
No 153
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.39 E-value=7.4e-13 Score=65.64 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=55.3
Q ss_pred CCceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+. |+ +.+.|++++..+...................+.|.|..+..+|.|.|.|.+.|..+.....+
T Consensus 128 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 128 KTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 48899999999885 33 38999999988864321110000112223346799999999999999999999987766554
Q ss_pred E
Q psy11826 80 R 80 (83)
Q Consensus 80 ~ 80 (83)
.
T Consensus 208 ~ 208 (213)
T 3mj8_L 208 S 208 (213)
T ss_dssp C
T ss_pred c
Confidence 3
No 154
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=63.01 Aligned_cols=68 Identities=18% Similarity=0.370 Sum_probs=53.2
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee-eEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR-RGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~-~~~ 79 (83)
.|+.+.|.|.+.+.|.| .+.|++++..+...... .....|.|..++ |.|.|.|.+.|..|... ...
T Consensus 120 ~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~----------~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~ 187 (195)
T 2c5d_C 120 ANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH----------GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTA 187 (195)
T ss_dssp TTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS----------SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCE
T ss_pred CCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc----------CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEE
Confidence 58889999999999999 99999999877654321 113578888877 78999999999998775 454
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.|
T Consensus 188 ~l 189 (195)
T 2c5d_C 188 TI 189 (195)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 155
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=68.15 Aligned_cols=74 Identities=14% Similarity=0.154 Sum_probs=46.0
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.+++ .+.|+++|..+...................+.|.|..+..+|.|.|.|.+.|..+..
T Consensus 234 ~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 234 AENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp STTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred CCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 68899999999985444 799999998775432111111111122334678899999999999999999988764
No 156
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.39 E-value=1.7e-12 Score=62.40 Aligned_cols=60 Identities=18% Similarity=0.397 Sum_probs=48.6
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.+.|.+. +.|.+.+.|++++..+..... ...|.|..++.+|.|.|.|.+.|..|.
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 99 EGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHL-------------DPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp TTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESS-------------CCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred cCCeEEEEEECCCCCCCceEEEEECCeEccccCC-------------CCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 588999999985 456689999999877543211 236999999999999999999998886
No 157
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.39 E-value=7.6e-13 Score=65.30 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=54.7
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCC--EEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDD--IELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+ .+.|.|.+.|++++ ..+...... ... ...|.|..++.+|.|.|.|.+.|..|.....
T Consensus 135 ~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~------~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 205 (214)
T 3jz7_A 135 IGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA------EMT---SPVISVKNASSEYSGTYSCTVQNRVGSDQCM 205 (214)
T ss_dssp TTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG------GTT---SSEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred cCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee------ccC---CCEEEEecCCHHHCEEEEEEEEcCCCcEEEE
Confidence 58889999999 78999999999954 333322110 000 1279999999999999999999999988877
Q ss_pred EEEe
Q psy11826 79 FRTD 82 (83)
Q Consensus 79 ~~~~ 82 (83)
+.|.
T Consensus 206 ~~l~ 209 (214)
T 3jz7_A 206 LRLD 209 (214)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7664
No 158
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.38 E-value=2.3e-11 Score=54.93 Aligned_cols=74 Identities=18% Similarity=0.324 Sum_probs=52.0
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCC----EEecccceEEEEEEec-CCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDD----IELTFHKYFQVHEWFL-GNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
+|+.+.|.|.+.+ .+.|.+.|-+.+ ..+....... .... .+......|.|.++..+|+|.|.|.+.+..|..
T Consensus 28 ~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~--~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g~i 105 (122)
T 1xau_A 28 TGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLY--TSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQVI 105 (122)
T ss_dssp TTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEE--EEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred cCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeee--cceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCCce
Confidence 6899999999866 579999999854 3333222111 1111 122235579999999999999999999988765
Q ss_pred ee
Q psy11826 76 RR 77 (83)
Q Consensus 76 ~~ 77 (83)
..
T Consensus 106 eS 107 (122)
T 1xau_A 106 NS 107 (122)
T ss_dssp EC
T ss_pred ee
Confidence 44
No 159
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.38 E-value=9.7e-13 Score=70.31 Aligned_cols=71 Identities=30% Similarity=0.447 Sum_probs=53.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC-EEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD-IELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.|.|.|.+.|++++ ..+...... ... ...|.|.+++.+|+|.|.|.+.|..|.......
T Consensus 219 ~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~------~~~---~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 289 (384)
T 3kld_A 219 KGTTVKLECFALGNPVPTILWRRADGKPIARKARR------HKS---NGILEIPNFQQEDAGSYECVAENSRGKNVAKGQ 289 (384)
T ss_dssp TTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEE------CTT---SCEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEEeecCCCcEEEEeCCCcccccccee------cCC---CcEEEECCCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 4888999999999999999999854 333322111 011 236999999999999999999999987655444
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 290 l 290 (384)
T 3kld_A 290 L 290 (384)
T ss_dssp E
T ss_pred E
Confidence 3
No 160
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.38 E-value=7.4e-12 Score=62.45 Aligned_cols=59 Identities=29% Similarity=0.573 Sum_probs=51.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.+++.+|.|.|.|.+.+..+.
T Consensus 32 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~--------------~~~L~i~~v~~~d~G~Y~C~~~n~~~~ 90 (218)
T 3k0w_A 32 AGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN--------------TSELIFNAVHVKDAGFYVCRVNNNFTF 90 (218)
T ss_dssp TTSBEEEECEETTTTSSEEEEEETTEECTTCC--------------SSEEEETTCCGGGCEEEEEEEECTTCC
T ss_pred CCCcEEEEeeecCCCCCEEEEEECCEECCCCC--------------CCEEEEccCChhhCeEeEEEEEcCCCC
Confidence 58899999999999999999999998776542 236999999999999999999998764
No 161
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.38 E-value=1.9e-12 Score=63.88 Aligned_cols=72 Identities=26% Similarity=0.487 Sum_probs=51.4
Q ss_pred CCceEEEEeE-eCccCCCeEEEEeCCE-EecccceEEE----EEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCM-AEGFPRPHITWTKDDI-ELTFHKYFQV----HEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~-~~~~~~~~~~w~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.+.|. ..+.|.|.+.|++++. .+........ ...... .....|.|..++.+|.|.|.|.+.|..|..
T Consensus 118 ~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 118 IGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTID--PKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp TTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEEC--TTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEec--CCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 5788999999 7899999999999998 6654321100 000000 012469999999999999999999999876
No 162
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.38 E-value=1.7e-12 Score=69.24 Aligned_cols=72 Identities=26% Similarity=0.442 Sum_probs=56.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+....... . .. ...|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 236 ~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~-~---~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 307 (404)
T 3p3y_A 236 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKF-E---NF----NKALRITNVSEEDSGEYFCLASNKMGSIRHTISV 307 (404)
T ss_dssp TTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEE-E---GG----GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred cCCCEEEEEEECCCCCCcEEEEECCEECCCCcccc-c---cc----CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEE
Confidence 47889999999999999999999998776543211 0 01 2379999999999999999999999887665544
No 163
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.38 E-value=3.1e-12 Score=62.97 Aligned_cols=78 Identities=15% Similarity=0.137 Sum_probs=52.3
Q ss_pred CCceEEEEeEeCccCC-----CeEEEEeCCEEe-cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR-----PHITWTKDDIEL-TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-----~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|. +.+.|++.+... ....+..... ........+|.|.+++.+|+|.|.|.+.+..+..
T Consensus 16 ~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 93 (202)
T 3bp6_B 16 VGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLE--EQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWD 93 (202)
T ss_dssp TTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECG--GGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEee--ccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcc
Confidence 5899999999988876 889999944333 2222222111 0001124579999999999999999999988766
Q ss_pred eeEEEE
Q psy11826 76 RRGFRT 81 (83)
Q Consensus 76 ~~~~~~ 81 (83)
...+.|
T Consensus 94 ~~~~~l 99 (202)
T 3bp6_B 94 YKYLTV 99 (202)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 555544
No 164
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.38 E-value=4.8e-12 Score=57.04 Aligned_cols=63 Identities=21% Similarity=0.408 Sum_probs=47.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+. |.+.|++++..+....++.+... . ....|.|.+++.+|+|.|.|.+.|.
T Consensus 22 ~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~--~---~~~~L~I~~v~~~D~G~Y~C~a~n~ 84 (108)
T 2dm7_A 22 EGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQD--G---TRCELQIHDLSVADAGEYSCMCGQE 84 (108)
T ss_dssp TTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEE--T---TEEEEEESSCCTTTCSEEEEEETTE
T ss_pred CCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEec--C---CEEEEEECCCCcccCEEEEEEEcCC
Confidence 58899999998765 68999999887765444433221 1 1356999999999999999999653
No 165
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=7.7e-12 Score=60.61 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=52.1
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee-EE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR-GF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~-~~ 79 (83)
.|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|..+ +|.|.|.|.+.|..|.... .+
T Consensus 112 ~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~------------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~ 177 (182)
T 1rhf_A 112 PNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP------------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTA 177 (182)
T ss_dssp TTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE------------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCE
T ss_pred CCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC------------CceEEEEecc--ccCeEEEEEEECCCCCcccceE
Confidence 58889999999999999 9999999987764321 1357888877 5889999999999987643 44
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.|
T Consensus 178 ~l 179 (182)
T 1rhf_A 178 TV 179 (182)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 166
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.37 E-value=4.2e-12 Score=63.53 Aligned_cols=78 Identities=13% Similarity=0.145 Sum_probs=47.1
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|..+.+.|.+.+ .|.|.+.|++++..+.......... ........+.+..++.+|.|.|+|.+.|..|.......
T Consensus 132 ~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~---~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 132 KDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVA---DGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp ETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEE---CTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred cCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEE---CCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 4778899999887 5999999998654332221111111 11111223334456788999999999999998887776
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 209 v~ 210 (226)
T 4f80_A 209 IS 210 (226)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 167
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.37 E-value=1.1e-12 Score=63.87 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=48.2
Q ss_pred eEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 5 KITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 5 ~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.+.|.|.+.+.|.|.+.|++++..+..... +.|..+..+|.|.|.|.+.|..|.......|
T Consensus 112 ~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~----------------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 112 NATLTCEVLEGTDVELKLYQGKEHLRSLRQ----------------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp TTEEEEECSSCSSCEEEEEETTEEEEEESS----------------SEEEEECSCCSSCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEecCCCCcEEEEEECCEECCCCCc----------------EEEEEEEccCCeEEEEEEEecCCCceecccc
Confidence 478999999999999999999987654332 2233567899999999999999987765543
No 168
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.37 E-value=4.9e-11 Score=61.80 Aligned_cols=72 Identities=17% Similarity=0.159 Sum_probs=54.9
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+. +.|.+.+.|++++..+.......+.... ......|.|.+++.+|.|.|.|.+.+......
T Consensus 121 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 193 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDR---NTGIIEMFMEKLQDEDEGTYTFQLQDGKATNH 193 (312)
T ss_dssp SSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEET---TTTEEEEEESCCCGGGCEEEEEEEESSSCEEE
T ss_pred eCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEcc---CCCEEEEEEccCCcccCEeEEEEEEeCCceEE
Confidence 588999999998 8899999999999988765544333211 11235699999999999999999987554443
No 169
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.37 E-value=2.4e-11 Score=59.75 Aligned_cols=68 Identities=12% Similarity=0.167 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+. .+.+.|++++..+......... .........|.|.+++.+|.|.|.|.+.|..+
T Consensus 114 ~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~---~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 114 SGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQP---HARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp TTCCEEEEEECSSC-CSEEEEEEC------CEEEC---------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CCCcEEEEEecCCC-CcEEEEEECCCccCCccccccc---cCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 58899999999888 7899999998766432110000 00111135799999999999999999999765
No 170
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.36 E-value=4.8e-12 Score=61.69 Aligned_cols=66 Identities=27% Similarity=0.620 Sum_probs=52.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+... ....... . ...|.|.+++.+|.|.|.|.+.+..|.
T Consensus 21 ~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~---~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 87 (192)
T 2iep_A 21 VEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRE---N----GQLLTILSVEDSDDGIYCCTANNGVGG 87 (192)
T ss_dssp TTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEG---G----GTEEEESSCCGGGCEEEEEEEECSSSC
T ss_pred CCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcC---C----ccEEEEcCCCcccCeEEEEEEEcCCCc
Confidence 5889999999999999999999999877642 2222211 1 126999999999999999999998776
No 171
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.36 E-value=1.6e-13 Score=71.18 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=54.2
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.|.|.| .+.|++++..+...... .+ ...+.|..++.+|+|.|.|.+.|..|.......
T Consensus 226 ~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~-------~~---~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~ 295 (308)
T 4fom_A 226 GRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLA-------SD---NTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKV 295 (308)
T ss_dssp TCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBC-------ST---TEEECCSCCCSCCCSEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEEEEEecCCCCcEEEEEECCeECCCcEEE-------cC---CeEEEECCCChhhCEEEEEEEEeCCCcEEEEEE
Confidence 46788999999999998 59999988766543210 11 235667889999999999999999998877665
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 296 l 296 (308)
T 4fom_A 296 I 296 (308)
T ss_dssp C
T ss_pred E
Confidence 4
No 172
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.36 E-value=3e-12 Score=61.99 Aligned_cols=60 Identities=20% Similarity=0.213 Sum_probs=48.1
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.+++ .+.|++++..+..... ...|.|..++.+|.|.|.|.+.|..+.
T Consensus 102 ~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 162 (175)
T 1fnl_A 102 EEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHH-------------NSDFHIPKATLKDSGSYFCRGLVGSKN 162 (175)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEE-------------CCCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCCEEEEEEcCCCCCceEEEEEECCeEccCCCC-------------CCEEEEcccChhhCeEEEEEEEcCCCC
Confidence 58899999999887664 8999999987642210 246999999999999999999997654
No 173
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.36 E-value=8.8e-12 Score=69.40 Aligned_cols=76 Identities=13% Similarity=0.202 Sum_probs=53.5
Q ss_pred CCceEEEEeEeC----ccCCCeEEEEeCCEEecccceEEE-E-EEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAE----GFPRPHITWTKDDIELTFHKYFQV-H-EWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~----~~~~~~~~w~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+. +.|.|.+.|++++..+........ . ..........+.|.|.++..+|+|.|.|.+.|..|..
T Consensus 456 ~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 535 (585)
T 2ocw_A 456 LGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYG 535 (585)
T ss_pred cCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCcc
Confidence 588899999986 678889999999977643221000 0 0001112224689999999999999999999998865
Q ss_pred ee
Q psy11826 76 RR 77 (83)
Q Consensus 76 ~~ 77 (83)
..
T Consensus 536 ~~ 537 (585)
T 2ocw_A 536 ET 537 (585)
T ss_pred EE
Confidence 43
No 174
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.35 E-value=2.6e-11 Score=62.37 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=56.9
Q ss_pred CCceEEEEeEeCccCC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|. +.+.|++++..+......... .......+.|.|.++..+|.|.|.|.+.|..|.....+.
T Consensus 200 ~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~---~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 276 (292)
T 4dkd_C 200 RGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFH---NNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMF 276 (292)
T ss_dssp SSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEE---TTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEE
T ss_pred cCCCEEEEEEecCCCCceEEEEeCCCcccccCccceec---cceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEE
Confidence 5889999999887665 457888887765543321111 111223468999999999999999999999998877766
Q ss_pred Ee
Q psy11826 81 TD 82 (83)
Q Consensus 81 ~~ 82 (83)
|.
T Consensus 277 l~ 278 (292)
T 4dkd_C 277 FR 278 (292)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 175
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.35 E-value=2.1e-12 Score=64.08 Aligned_cols=59 Identities=20% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+. |.+.+.|++++..+..... ...|.|..++.+|.|.|.|.+.|..+
T Consensus 102 ~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~-------------~~~L~i~~v~~~D~G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 102 EEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHH-------------NSDFYIPKATLKDSGSYFCRGLVGSK 161 (204)
T ss_dssp TTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEE-------------CCCEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCcEEEEEEecCCCCCceEEEEECCcEeecccC-------------CceEEECcCCcccCEEEEEEEEeCCC
Confidence 58899999998665 5678999999987543211 23699999999999999999999433
No 176
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.35 E-value=1.1e-11 Score=60.01 Aligned_cols=65 Identities=22% Similarity=0.335 Sum_probs=51.5
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+. +.|++++..+... ...|.|.+++.+|.|.|.|.+.+..+.....+.
T Consensus 21 ~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~---------------~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~ 85 (175)
T 1fnl_A 21 EKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ---------------ASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLE 85 (175)
T ss_dssp TTCCEEEEEECCCBTTBCCCEEEETTEEEESS---------------CSEEEESSCCGGGCEEEEEECSSSCCCCCEEEE
T ss_pred CCCcEEEEeeCCCCCCCcceEEEECCEEccCC---------------ceEEEEeCCCcccCEEEEEEeeCCcccccEEEE
Confidence 588999999999888776 7899999776532 236999999999999999999986665444443
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 86 V 86 (175)
T 1fnl_A 86 V 86 (175)
T ss_dssp E
T ss_pred E
Confidence 3
No 177
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.35 E-value=6.8e-14 Score=79.57 Aligned_cols=73 Identities=25% Similarity=0.414 Sum_probs=0.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+......... ...++|.|.++..+|+|.|.|.+.|..|.......|
T Consensus 680 ~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~-------~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 752 (772)
T 3v2a_R 680 IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK-------DGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFF 752 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEc-------CCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEE
Confidence 4788999999999999999999999877654332211 113579999999999999999999999987766544
No 178
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.35 E-value=3.1e-11 Score=66.61 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=57.0
Q ss_pred CCceEEEEeEeCccCCCe-EEEEeCCEEe--cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTKDDIEL--TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+.|.|. +.|++++..+ ......... ..........|.|.+++.+|.|.|.|.+.|..|.....
T Consensus 225 ~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~ 302 (524)
T 2ec8_A 225 EGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHH--GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 302 (524)
T ss_dssp TTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEEC--SSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE
T ss_pred cCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccc--cCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE
Confidence 588999999999998887 9999998763 222111110 00022335689999999999999999999999887665
Q ss_pred EEE
Q psy11826 79 FRT 81 (83)
Q Consensus 79 ~~~ 81 (83)
+.|
T Consensus 303 ~~l 305 (524)
T 2ec8_A 303 TTL 305 (524)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 179
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.35 E-value=4.2e-12 Score=67.30 Aligned_cols=80 Identities=10% Similarity=0.025 Sum_probs=56.3
Q ss_pred CCceEEEEeEeCc-----cCCCeEEEEeCCEEecc--------cceEEEEEEecC-----CCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEG-----FPRPHITWTKDDIELTF--------HKYFQVHEWFLG-----NNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~-----~~~~~~~w~~~~~~~~~--------~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+.+ .|.|.+.|++++..+.. .....+...... .......|.|.+++.+|+|.
T Consensus 190 ~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 269 (363)
T 1wio_A 190 EGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269 (363)
T ss_dssp TBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEE
T ss_pred cCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcE
Confidence 5889999998776 77889999999877654 222222111100 01112379999999999999
Q ss_pred EEEEeeCC--CcceeeEEEE
Q psy11826 64 YECVADNP--FAIDRRGFRT 81 (83)
Q Consensus 64 y~C~~~~~--~g~~~~~~~~ 81 (83)
|.|.+.|. .|.......|
T Consensus 270 Y~C~a~n~~~~g~~~~~~~l 289 (363)
T 1wio_A 270 GNLTLALEAKTGKLHQEVNL 289 (363)
T ss_dssp EEEEECBTTTTCCEEEEEEE
T ss_pred EEEEEEEhhhcCeEEEEEeE
Confidence 99999999 8876666554
No 180
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.35 E-value=2.6e-12 Score=68.45 Aligned_cols=73 Identities=18% Similarity=0.299 Sum_probs=54.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.......+.. ........|.|..+..+|.|.|.|.+.|..|....
T Consensus 226 ~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 298 (395)
T 1bih_A 226 AGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITR---HNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQK 298 (395)
T ss_dssp TTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEES---CSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEE
T ss_pred CCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEE---EecCCCceEEEccCChhhCEEEEEEEEeCCCCceE
Confidence 58889999999999999999999998876532211111 00111236999999999999999999999887543
No 181
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.34 E-value=1.6e-12 Score=64.57 Aligned_cols=64 Identities=16% Similarity=0.389 Sum_probs=50.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccce-EEEEEEecCCCeEEEEEEEccC-CCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKY-FQVHEWFLGNNTIKSKMEIDPA-TQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|. +.|.|.+.|++++..+..... ..+.. ....|.|.++ +.+|+|.|.|.+.|..|.
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~-------~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGS-------DEDHLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEE-------ETTEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred cCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEec-------CCCEEEEeeCCccccCEEEEEEeccCCCC
Confidence 5889999998 788899999999988764311 00100 0247999999 999999999999999986
No 182
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.34 E-value=4.3e-13 Score=58.04 Aligned_cols=53 Identities=21% Similarity=0.497 Sum_probs=43.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccC-CCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPA-TQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~~~~ 70 (83)
.|+.++|.|.+.+.|. +.|++++..+.... ...|.|.++ ..+|+|.|.|.+..
T Consensus 13 ~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~~--------------~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 13 SGTSVELTCPLDSDEN--LKWEKNGQELPQKH--------------DKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp ETTEEEEECSSCCCSS--CEEEETTEECTTCC--------------SSCCBCCSCCTTTTCSCEEEECSS
T ss_pred cCCeEEEEEECCCCCc--EEEEECCEECcCCC--------------CCEEEECccCccCcCEEEEEEEcc
Confidence 4889999999988874 99999998876431 136888996 78999999999865
No 183
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.34 E-value=1.8e-11 Score=59.57 Aligned_cols=68 Identities=28% Similarity=0.491 Sum_probs=52.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|. .+.|++ ++..+........... . ..+.|.|.+++.+|.|.|.|.+.+..|..
T Consensus 16 ~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 16 VGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKE--G---VRSRLTIYNANIEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp TTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEE--T---TEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred cCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECC--C---CeEEEEEccCCcccCeEEEEEEEeCCCCc
Confidence 5889999999988877 899999 6666655444433221 1 13589999999999999999999987764
No 184
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.34 E-value=3.5e-12 Score=61.75 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=48.1
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+. +.|.+.+.|++++..+..... ...|.|..++.+|.|.|.|.+.|..+.
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~-------------~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 159 (176)
T 1f2q_A 99 EGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYE-------------NHNISITNATVEDSGTYYCTGKVWQLD 159 (176)
T ss_dssp TTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCC-------------SSEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCEEEeeecC-------------CCeEEECCCCcccCEEEEEEEEeCCcc
Confidence 588999999984 566779999999987753221 237999999999999999999986443
No 185
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.33 E-value=7.5e-12 Score=65.70 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=51.1
Q ss_pred CCceEEEEeEeCccC-CCeEEEEeCCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC--Ccc
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTKDDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP--FAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~--~g~ 74 (83)
.|+.+.|.|.+.+.| .|.+.|++++..+... ...... ...|.|.+++.+|.|.|.|.+.|. .|.
T Consensus 142 ~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~---------~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~ 209 (329)
T 3oq3_B 142 DKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS---------GQNLIIHNPELEDSGRYDCYVHYDDVRIK 209 (329)
T ss_dssp TTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE---------TTEEEECSCCGGGCEEEEEEEEECCTTSS
T ss_pred CCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC---------CCEEEEeecChhhCEEEEEEEEecccCCC
Confidence 588999999999999 8999999999887532 222111 147999999999999999999986 544
No 186
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.8e-11 Score=61.36 Aligned_cols=64 Identities=17% Similarity=0.291 Sum_probs=52.8
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.+ .+.|++++..+.... ..|.|..++.+|.|.|.|.+.+..+.....+.
T Consensus 15 ~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~---------------~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 79 (262)
T 3rjd_A 15 QEETVTLHCEVLHLPGSSSTQWFLNGTATQTST---------------PSYRITSASVNDSGEYRCQRGLSGRSDPIQLE 79 (262)
T ss_dssp TTCCEEEEEECSSCCCTTCEEEEETTEECSCCS---------------SEEEESSCCGGGCEEEEEEESSSCCCCCEEEE
T ss_pred CCCeEEEEEECCCCCCCceEEEEECCEEeeccC---------------CeEEEecCCcccCeEEEEEEecCCccccEEEE
Confidence 58899999999998888 899999998776432 26889999999999999999987766544443
No 187
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.33 E-value=3.9e-12 Score=63.02 Aligned_cols=74 Identities=15% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEeccc-ceE-EEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFH-KYF-QVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+. |.+ .+.|+++|..+... ... .............+.|.|..+..+|.|.|.|.+.|.....
T Consensus 125 ~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 125 ATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 47889999999874 444 79999999887654 110 0000001122345689999999999999999999976643
No 188
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=60.96 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.| +.+.|++++..+....... ...........|.|.+++.+|.|.|.|.+.|..+
T Consensus 113 ~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~---~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 113 SGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDS---QLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ----CEEEEEESSCC-SEEEEEEC---CCEEEEEC---EECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred CCCcEEEEEEcCCCC-CEEEEEccCCccccccccc---ccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 588899999999988 8999999987664321100 0011122346799999999999999999998654
No 189
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.32 E-value=3.7e-11 Score=66.88 Aligned_cols=70 Identities=19% Similarity=0.330 Sum_probs=52.8
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCC-CeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGN-NTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+. +.|.|.+.|++++..+............... ......|.|.+++.+|+|.|.|.+.|.
T Consensus 241 ~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~ 312 (527)
T 3qs9_E 241 VGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (527)
T ss_dssp TTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE
T ss_pred CCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC
Confidence 689999999996 8999999999999877654433222211111 122456999999999999999999987
No 190
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.32 E-value=4.5e-12 Score=58.80 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=52.0
Q ss_pred CCceEEEEeEeCccCC---CeEEEEeCCEEecc-----------c------ceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFPR---PHITWTKDDIELTF-----------H------KYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~---~~~~w~~~~~~~~~-----------~------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+++.|.|.....+. ..+.|++.+..... . .+... ..........+|.|.+++.+|+
T Consensus 19 vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~--~~~~~~~g~~sL~I~~v~~~D~ 96 (125)
T 4gos_A 19 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAV--FADQVIVGNASLRLKNVQLTDA 96 (125)
T ss_dssp TTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEE--CTTTGGGTBCCEEESSCCGGGC
T ss_pred CCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEE--ecCCccCCeEEEEECCCChHHC
Confidence 6899999999764333 36899985431110 0 00110 0000111235799999999999
Q ss_pred eEEEEEeeCCCcceeeEEEEe
Q psy11826 62 GYYECVADNPFAIDRRGFRTD 82 (83)
Q Consensus 62 g~y~C~~~~~~g~~~~~~~~~ 82 (83)
|.|.|.+.+..+..+..+.|+
T Consensus 97 G~Y~C~v~~~~g~~~~~v~Lk 117 (125)
T 4gos_A 97 GTYKCYIITSKGKGNANLEYK 117 (125)
T ss_dssp EEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEeCCCeEEEEEEEE
Confidence 999999999998888777765
No 191
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.32 E-value=9.4e-12 Score=67.70 Aligned_cols=71 Identities=17% Similarity=0.302 Sum_probs=52.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE-Eecccc---eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI-ELTFHK---YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
+|+.+.+.|.+ +.|.|.+.|++++. .+.... +.... . ..+|.|.+++.+|+|.|.|.+.|..|....
T Consensus 355 ~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~----~----~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 425 (440)
T 3zyj_A 355 EGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVL----S----DGTLNFTNVTVQDTGMYTCMVSNSVGNTTA 425 (440)
T ss_dssp TTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEEC----T----TCCEEESSCCSTTCEEEEEEEECSSCEEEE
T ss_pred cCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEc----c----CCeEEEccCChhhCEEEEEEEEcCCCcEEE
Confidence 58899999998 57899999998543 332211 11110 0 125999999999999999999999998877
Q ss_pred EEEE
Q psy11826 78 GFRT 81 (83)
Q Consensus 78 ~~~~ 81 (83)
...+
T Consensus 426 ~~~~ 429 (440)
T 3zyj_A 426 SATL 429 (440)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 192
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.32 E-value=3.7e-12 Score=63.10 Aligned_cols=73 Identities=12% Similarity=0.254 Sum_probs=51.3
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEE--ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEW--FLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
|+.+.|.|.+.+ .|.+ .+.|++++..+........... ........+.|.|..+..+|.|.|.|.+.|.....
T Consensus 127 g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 127 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 678999999987 5555 7999999988765411111000 01112235689999999999999999999977653
No 193
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.32 E-value=6.9e-12 Score=61.62 Aligned_cols=65 Identities=18% Similarity=0.328 Sum_probs=49.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.++|.|.+.+ +.+.+.|++++..+...... .........|.|.+++.+|+|.|.|.+.|..|
T Consensus 18 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 3p2t_A 18 WGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQN------PLEPKNKARFSIPSMTEDYAGRYRCYYRSPVG 82 (196)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTSCSCSEEEC------CCSSSSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCcEEEEeeCCC-CCCEEEEEECCCCCcccccc------cccCCceEEEEeccCCcccCceEEEEEeCCCc
Confidence 5899999999887 77899999998766532110 00111245799999999999999999998876
No 194
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.32 E-value=8e-11 Score=60.55 Aligned_cols=69 Identities=25% Similarity=0.349 Sum_probs=51.5
Q ss_pred CCceEEEEeEeCccC-CCeEEEEe-CCEEeccc-ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTK-DDIELTFH-KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.+ .+.+.|++ ++..+... ......... .....|.|.+++.+|.|.|.|.+.+..|.
T Consensus 16 ~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~ 87 (291)
T 1qz1_A 16 VGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWND----DDSSTLTIYNANIDDAGIYKCVVTAEDGT 87 (291)
T ss_dssp TTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEE----TTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred CCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcC----CCeEEEEEecCCCCCCEEEEEEEEcCCCC
Confidence 589999999999886 68999998 77666532 222222110 11457999999999999999999998754
No 195
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.31 E-value=9.6e-12 Score=61.82 Aligned_cols=73 Identities=15% Similarity=0.277 Sum_probs=50.5
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEE--ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEW--FLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
|+.+.|.|.+.+ .|.| .+.|++++..+........... ........+.|.|..+..+|.|.|.|.+.|.....
T Consensus 129 g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 129 SGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 678999999988 4554 8999999987764411110000 01112344579999999999999999999977543
No 196
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.31 E-value=1.9e-11 Score=67.45 Aligned_cols=74 Identities=14% Similarity=0.210 Sum_probs=52.6
Q ss_pred CCceEEEEeEeCccCC----CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR----PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.++ +.+.|++++..+...................+.|.|..+..+|.|.|.|.+.|..+..
T Consensus 333 ~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 410 (523)
T 2rcj_C 333 ISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPA 410 (523)
T ss_pred cCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCC
Confidence 4889999999988654 4899999998876543211111111122344679999999999999999999876654
No 197
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.31 E-value=6.9e-13 Score=69.83 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=37.9
Q ss_pred CCceEEEEeEeC----ccCCCeEEEEeCCEEecc-cceEEEEEEe----cCCCeEEEEEEEccCCCCCC-eEEEEEeeCC
Q psy11826 2 LGRKITFFCMAE----GFPRPHITWTKDDIELTF-HKYFQVHEWF----LGNNTIKSKMEIDPATQKDA-GYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~----~~~~~~~~w~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~l~i~~~~~~~~-g~y~C~~~~~ 71 (83)
.|+.+.|.|.+. +.|.|.+.|++++..+.. .......... .......+.|.|..+..+|. |.|.|.+.|.
T Consensus 240 ~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~ 319 (349)
T 4dep_C 240 PGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSA 319 (349)
T ss_dssp -----CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECS
T ss_pred cCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcC
Confidence 477889999987 578899999999877654 1111110000 01122345699999999999 9999999999
Q ss_pred CcceeeEEEE
Q psy11826 72 FAIDRRGFRT 81 (83)
Q Consensus 72 ~g~~~~~~~~ 81 (83)
.|.....+.|
T Consensus 320 ~G~~~~~~~l 329 (349)
T 4dep_C 320 KGEVAKAAKV 329 (349)
T ss_dssp SCEEEEECC-
T ss_pred CCcEEEEEEE
Confidence 9987766544
No 198
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.30 E-value=1.6e-11 Score=60.80 Aligned_cols=78 Identities=13% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEE-EEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQ-VHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+.+++ .+.|++++..+....... ............+.|.|..+..+|.|.|.|.+.|........
T Consensus 129 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 129 STAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 47789999999886443 799999998876542110 011111122344678999999999999999999987665544
Q ss_pred E
Q psy11826 79 F 79 (83)
Q Consensus 79 ~ 79 (83)
+
T Consensus 209 v 209 (212)
T 1q0x_L 209 L 209 (212)
T ss_dssp E
T ss_pred e
Confidence 3
No 199
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.30 E-value=8.8e-12 Score=66.57 Aligned_cols=72 Identities=22% Similarity=0.468 Sum_probs=56.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccce-EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKY-FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+..... .... . ...|.|..+..+|.|.|.|.+.|..|.......
T Consensus 235 ~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~----~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 306 (403)
T 3laf_A 235 EGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL----G----GSNLLISNVTDDDSGTYTCVVTYKNENISASAE 306 (403)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE----T----TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC----C----ccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEE
Confidence 588899999999999999999999987764322 1111 1 136999999999999999999998887665554
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 307 l 307 (403)
T 3laf_A 307 L 307 (403)
T ss_dssp E
T ss_pred E
Confidence 4
No 200
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.30 E-value=8.1e-12 Score=68.15 Aligned_cols=71 Identities=17% Similarity=0.324 Sum_probs=53.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC-EEecccc---eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD-IELTFHK---YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
+|+.+.+.|.+. |.|.+.|++++ ..+.... +.... . ..+|.|..++.+|+|.|.|.+.|..|....
T Consensus 366 ~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~----~----~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~ 435 (452)
T 3zyi_A 366 EGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVL----N----DGTLNFSHVLLSDTGVYTCMVTNVAGNSNA 435 (452)
T ss_dssp TTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEEC----T----TSCEECSSCCTTCCEEEEEEEECSSCEEEE
T ss_pred CCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEEC----C----CCeEEEeecCHHHCEEEEEEEEcCCCcEEE
Confidence 588999999987 99999999854 3333221 11110 0 135999999999999999999999999887
Q ss_pred EEEEe
Q psy11826 78 GFRTD 82 (83)
Q Consensus 78 ~~~~~ 82 (83)
...+.
T Consensus 436 ~~~l~ 440 (452)
T 3zyi_A 436 SAYLN 440 (452)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77664
No 201
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.29 E-value=1.7e-11 Score=59.34 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=49.9
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.+.+ .+.|++++..+.... ..|.|.+++.+|.|.|.|.+.+..+.....+.
T Consensus 18 ~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~---------------~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~ 82 (176)
T 1f2q_A 18 KGENVTLTCNGNNFFEVSSTKWFHNGSLSEETN---------------SSLNIVNAKFEDSGEYKCQHQQVNESEPVYLE 82 (176)
T ss_dssp TTCCEEEECCTTCC----CCEEEETTEECSCCS---------------SEEEECSCCGGGCEEEEEECTTSSCCCCEEEE
T ss_pred cCCcEEEEEeCCCCCCcceEEEEECCeECCCCc---------------eEEEEeccceecCEEEEEEcCCccccccEEEE
Confidence 58899999999888775 589999998776432 36999999999999999999987765544444
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 83 V 83 (176)
T 1f2q_A 83 V 83 (176)
T ss_dssp E
T ss_pred E
Confidence 3
No 202
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.29 E-value=2.1e-12 Score=67.66 Aligned_cols=81 Identities=22% Similarity=0.353 Sum_probs=55.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEe----CCEEecccce--EEEEEEec--CCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK----DDIELTFHKY--FQVHEWFL--GNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~----~~~~~~~~~~--~~~~~~~~--~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|.|.+.|++ ++..+..... ..+..... ......+.|.|..++.+|.|.|.|.+.|..|
T Consensus 236 ~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 315 (334)
T 1ry7_B 236 LGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG 315 (334)
T ss_dssp SSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSC
T ss_pred CCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCC
Confidence 47889999999999999999999 5555433211 00000000 0001123699999999999999999999999
Q ss_pred ceeeEEEEe
Q psy11826 74 IDRRGFRTD 82 (83)
Q Consensus 74 ~~~~~~~~~ 82 (83)
.....+.|.
T Consensus 316 ~~~~~~~l~ 324 (334)
T 1ry7_B 316 FSHHSAWLV 324 (334)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 887766553
No 203
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.29 E-value=6.6e-12 Score=62.35 Aligned_cols=78 Identities=10% Similarity=0.147 Sum_probs=50.6
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
|+.+.|.|.+.+ .|.| .+.|++++..+...................+.|.+......|.|.|.|.+.|..+.....+.
T Consensus 136 ~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 215 (218)
T 3s96_B 136 ENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSLS 215 (218)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccccc
Confidence 567899999988 5666 89999999887652211111101122223456888888888899999999999887665543
No 204
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.29 E-value=3.1e-12 Score=62.24 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=47.1
Q ss_pred CCceEEEEeEeCc--cCCCeEEEEeCCEEecc----------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 2 LGRKITFFCMAEG--FPRPHITWTKDDIELTF----------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~~~--~~~~~~~w~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
+|+.+.|.|.... .+.+.+.|++++..+.. ..+..+ .. ..+|.|.+++.+|+|.|.|.+.
T Consensus 10 ~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~-----~~---~gsL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 10 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI-----LA---NGDLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp TTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE-----CT---TSCEEESSCCGGGCEEEEEEEE
T ss_pred cCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE-----CC---CCcEEEcccccccCEEEEEEEE
Confidence 6889999995333 55678999999865431 111111 00 1249999999999999999999
Q ss_pred CCCcce
Q psy11826 70 NPFAID 75 (83)
Q Consensus 70 ~~~g~~ 75 (83)
|..|..
T Consensus 82 n~~g~~ 87 (176)
T 1hng_A 82 STNGTR 87 (176)
T ss_dssp ETTCCE
T ss_pred eCCCCE
Confidence 988875
No 205
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.29 E-value=3.8e-12 Score=63.66 Aligned_cols=73 Identities=12% Similarity=0.190 Sum_probs=50.8
Q ss_pred CCceEEEEeEeCcc---CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF---PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~---~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |. +.+.|++++..+...................+.|.|..++.+|.|.|.|.+.+..+.
T Consensus 25 ~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 25 ISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLP 101 (218)
T ss_dssp TTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCS
T ss_pred cCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCC
Confidence 68999999998887 33 789999999776543211111100111123467999999999999999999987654
No 206
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.28 E-value=1.4e-11 Score=61.64 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=51.7
Q ss_pred CCceEEEEeEeCccCCC---eEEEEeCCEEec-----------ccc----eEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRP---HITWTKDDIELT-----------FHK----YFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~---~~~w~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.|.+.+.+.+ .+.|++++.... ... ..+.............+|.|.+++.+|+|.
T Consensus 18 ~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 97 (226)
T 4f80_A 18 VGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGK 97 (226)
T ss_dssp TTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEE
T ss_pred cCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCee
Confidence 69999999998766544 689998653211 000 000000001111234679999999999999
Q ss_pred EEEEeeCCCcceeeEEEE
Q psy11826 64 YECVADNPFAIDRRGFRT 81 (83)
Q Consensus 64 y~C~~~~~~g~~~~~~~~ 81 (83)
|.|.+.|..+.....+.+
T Consensus 98 Y~C~a~n~~~~~~~~v~~ 115 (226)
T 4f80_A 98 YLCYFQDGDFYEKALVEL 115 (226)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred EEEEEECCCcEEEEEEEE
Confidence 999999988876655543
No 207
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.28 E-value=2e-11 Score=60.82 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=55.1
Q ss_pred CCceE-EEEeEeC-ccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKI-TFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~-~~~C~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+ .+.|.+. +.|.|.+.|++++....... .............+.|.|..+...|.|.|.|.+.|..+.....+
T Consensus 129 ~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~ 206 (221)
T 3eow_R 129 TGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTS--QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLL 206 (221)
T ss_dssp CSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCE--EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEE
T ss_pred CCceEEEEEEECCCccCCCeeEEEeCCCCCCccc--eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEE
Confidence 46667 5999976 88999999998643332211 10011112233456799999999999999999999988777776
Q ss_pred EEeC
Q psy11826 80 RTDY 83 (83)
Q Consensus 80 ~~~~ 83 (83)
.+.|
T Consensus 207 ~v~~ 210 (221)
T 3eow_R 207 TVSL 210 (221)
T ss_dssp EECC
T ss_pred EEEE
Confidence 6653
No 208
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.28 E-value=5.1e-11 Score=57.17 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=49.5
Q ss_pred CCceEEEEeEeCccC-CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.| .+.+.|++++..+..... .+.+..++.+|.|.|.|.+.+........+.
T Consensus 18 ~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~---------------~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~ 82 (170)
T 3ry4_A 18 QEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ---------------PSYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82 (170)
T ss_dssp TTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS---------------SEEEEECCGGGCEEEEEEETTSBCCCCEEEE
T ss_pred CCCcEEEEEEecCCCCcceEEEEECCeEcccCcc---------------ceEEEecccccCeEEEEEEeCCCceEeEEEE
Confidence 588999999988886 578999999988765421 2445678999999999999986655444443
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 83 v 83 (170)
T 3ry4_A 83 V 83 (170)
T ss_dssp E
T ss_pred E
Confidence 3
No 209
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.27 E-value=3.7e-11 Score=59.01 Aligned_cols=67 Identities=18% Similarity=0.413 Sum_probs=48.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+ +.+.+.|++++..+.......... .......|.|.+++.+|+|.|.|.+.|..+
T Consensus 113 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 113 SGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHG----AQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp TTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEE----EEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CCCeEEEEEecCC-CCCEEEEEeCCCcccceeeccccc----ccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 5889999999876 456899999987665432111100 011245799999999999999999999876
No 210
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.27 E-value=1.5e-12 Score=68.18 Aligned_cols=76 Identities=24% Similarity=0.435 Sum_probs=56.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+......... ........|.|..++.+|.|.|.|.+.|..|.....+.|
T Consensus 137 ~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~----~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 137 AANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGI----KLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp TTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCC----CCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEccCCCCCeEEEEECCEECcccccccce----ecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEE
Confidence 4788999999999999999999998876543221000 000112369999999999999999999988876655544
No 211
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.27 E-value=1.5e-12 Score=64.11 Aligned_cols=74 Identities=24% Similarity=0.413 Sum_probs=52.7
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEecccceEEEEE--EecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHE--WFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+ .+.|.|.+.|++++..+.......... .........+.|.|..++.+|.|.|.|.+.|..|..
T Consensus 121 ~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 121 IGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp TTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred cCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 57889999996 899999999999988765432110000 000000012479999999999999999999999877
No 212
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.27 E-value=1.4e-11 Score=61.08 Aligned_cols=73 Identities=23% Similarity=0.355 Sum_probs=52.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.......... ..........+.|..++.+|.|.|.|.+.|..|..
T Consensus 23 ~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~-~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~ 95 (217)
T 2vr9_A 23 KNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRV-QFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQA 95 (217)
T ss_dssp TTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEE-ECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeE-EecCCceEEEEEeccCCcccCceEEEEEecCCCcc
Confidence 68999999999999999999999998876532100000 01122222334678899999999999999887754
No 213
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.26 E-value=4.6e-11 Score=54.09 Aligned_cols=59 Identities=20% Similarity=0.287 Sum_probs=42.3
Q ss_pred CCceEEEEeEeCccCCC-----eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRP-----HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.++|.|...+.+.. .+.|++++..+.... ....|.|..++.+|+|.|.|.+.+..+
T Consensus 21 ~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~~~-------------~~~~l~i~~v~~~dsG~Y~C~~~~~~~ 84 (108)
T 4hwn_A 21 AGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQSRG-------------LSSEFQIPTASEDHSGSYWCEAATEDN 84 (108)
T ss_dssp TTCCEEEEEEC---------CCEEEEEETTEEEEEEE-------------SCCEEEESSCCGGGCEEEEEEEECTTS
T ss_pred CCCcEEEEEcccCCCCCcCcceEEEEEECCcCccCCC-------------cccEEEeCccCcccCeEEEEEEEeCCC
Confidence 58999999997655443 389999998664210 024699999999999999999998654
No 214
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.26 E-value=9e-11 Score=52.94 Aligned_cols=66 Identities=20% Similarity=0.349 Sum_probs=46.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 89 (108)
T 1jhl_L 15 PGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG-----SGTDFTLTISSLEPEDFAMYICQ 89 (108)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----SSSEEEEEECSCCTTCCSEEEEE
T ss_pred CCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe-----cCCEEEEEECCCCHHHCEEEEEE
Confidence 6899999999999888999999843 1 1110 11121110 11235799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.|..
T Consensus 90 ~~n~~ 94 (108)
T 1jhl_L 90 QHNEY 94 (108)
T ss_dssp ECSSS
T ss_pred EccCC
Confidence 98863
No 215
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.26 E-value=3.6e-11 Score=63.36 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=49.5
Q ss_pred CCceEEEEeEe-----CccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMA-----EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~-----~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.. .+.|.|.+.|++++..+......... ...|.|.+++.+|.|.|.|.+.|..
T Consensus 134 ~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 134 EYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPE---------GMNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp TCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEE---------TTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred cCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeec---------CCEEEEeeeeecCCcEEEEEEEEee
Confidence 57889999974 67889999999999887654322211 1369999999999999999999976
No 216
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.26 E-value=5.2e-11 Score=59.65 Aligned_cols=69 Identities=20% Similarity=0.234 Sum_probs=51.1
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+ +.|.| .+.|.+.+..+ ...... .....|.|.+++.+|.|.|.|.+.|..+......
T Consensus 21 ~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~-------~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 21 LGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSD-------TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp TTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEE-------SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEec-------CCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 58999999999 88888 99999854332 111100 1135799999999999999999999887765555
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.|
T Consensus 90 ~l 91 (210)
T 1gsm_A 90 QL 91 (210)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 217
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.26 E-value=5.6e-12 Score=62.44 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=54.5
Q ss_pred CceEEEEeEeCccC--CCeEEEEeCCEEecccceEE-EEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 3 GRKITFFCMAEGFP--RPHITWTKDDIELTFHKYFQ-VHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 3 g~~~~~~C~~~~~~--~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
|+.+.|.|.+.+.+ .+.+.|+++|..+....... ............+.|.|..+...|.|.|.|.+.|..+.....+
T Consensus 126 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 126 ANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp TTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 78899999988853 47899999998876421111 0111112223346799999888899999999999887766554
Q ss_pred E
Q psy11826 80 R 80 (83)
Q Consensus 80 ~ 80 (83)
.
T Consensus 206 ~ 206 (211)
T 3tv3_L 206 A 206 (211)
T ss_dssp C
T ss_pred c
Confidence 3
No 218
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.26 E-value=4.5e-11 Score=59.68 Aligned_cols=75 Identities=19% Similarity=0.374 Sum_probs=52.4
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+.... ..... ..+.....+.|.|..+...| |.|.|.+.|..+......
T Consensus 141 ~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~-~~~~~-~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 141 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT-FPAVL-QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp CSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE-EEEEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CCCcEEEEEEEccEECCCCEEEEecCCeEcceEe-ccccc-cCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 57889999999885 888 999999886553221 11111 11122334578999988889 999999999988754433
No 219
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.26 E-value=4.2e-11 Score=53.58 Aligned_cols=72 Identities=22% Similarity=0.373 Sum_probs=52.8
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCC----EEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDD----IELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.+.|.+.+ .+.|.+.|-+-+ ..+.... +.+. ..+......|.+..+..+|+|.|+|.++...|..+
T Consensus 25 ~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~--q~w~--E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ie 100 (120)
T 2aw2_A 25 AGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQ--TSWK--EEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIE 100 (120)
T ss_dssp TTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSC--EEEE--ECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCeEEEEccEEeccCCCceEEEecCCceEEECcccc--ccce--ecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcEE
Confidence 6899999999988 589999998744 4444332 2222 12233345799999999999999999999888654
Q ss_pred e
Q psy11826 77 R 77 (83)
Q Consensus 77 ~ 77 (83)
+
T Consensus 101 S 101 (120)
T 2aw2_A 101 S 101 (120)
T ss_dssp C
T ss_pred e
Confidence 4
No 220
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.25 E-value=9.3e-12 Score=62.07 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=54.1
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEec--ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELT--FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+. |.| .+.|++++.... ...... . .......+.|.|..+...+ |.|.|.+.|..+....
T Consensus 139 ~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~--~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 213 (220)
T 1pz5_B 139 SGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVL--Q--SGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDL 213 (220)
T ss_dssp CSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEE--E--TTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred CCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcc--c--CCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEee
Confidence 57889999999887 888 999998775311 000000 0 0111234678998888766 9999999999998888
Q ss_pred EEEEeC
Q psy11826 78 GFRTDY 83 (83)
Q Consensus 78 ~~~~~~ 83 (83)
.+.+.|
T Consensus 214 ~~~~~~ 219 (220)
T 1pz5_B 214 IKEISG 219 (220)
T ss_dssp EEECCC
T ss_pred eecCCC
Confidence 877654
No 221
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.25 E-value=3.5e-11 Score=58.42 Aligned_cols=65 Identities=20% Similarity=0.395 Sum_probs=46.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccc--eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.... ..... . ...|.|..++.+|.|.|.|.+.+..+.
T Consensus 16 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 82 (189)
T 2v5t_A 16 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----A----NNNLQILNINKSDEGIYRCEGRVEARG 82 (189)
T ss_dssp TTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEEC----T----TSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred CCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEe----c----CCCEEEeeCCHhHCcEEEEEEEEcCCC
Confidence 58899999999899999999999887665322 12111 1 125999999999999999999887643
No 222
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.25 E-value=4.1e-11 Score=60.78 Aligned_cols=66 Identities=15% Similarity=0.314 Sum_probs=52.2
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.+.|.+ .+.|.+.+.|++++..+..... ...|.|..++.+|.|.|.|.+.|..+.....+.
T Consensus 96 ~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~-------------~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 162 (262)
T 3rjd_A 96 EGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHW-------------NSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS 162 (262)
T ss_dssp TTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEE-------------CCCEEESSCCGGGCEEEEEEEESSSEEEEECEE
T ss_pred cCCeEEEEEEccCCCCCceEEEEECCccccccCC-------------CCeEEEEECChhhCEEEEEEEeCCCCccccceE
Confidence 58899999998 6778889999999887643211 236899999999999999999998876555443
No 223
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.24 E-value=1.6e-11 Score=60.52 Aligned_cols=63 Identities=22% Similarity=0.401 Sum_probs=47.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.... ...|.|.+++.+|.|.|.|.+.
T Consensus 15 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~---------~~~L~i~~v~~~D~G~Y~C~~~ 85 (212)
T 1f97_A 15 ENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS---------SSGITFSSVTRKDNGEYTCMVS 85 (212)
T ss_dssp TTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE---------TTEEEESCCCGGGCEEEEEEEE
T ss_pred cCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee---------ceeEEEcccCcccCeEEEEEEE
Confidence 589999999998889999999986644210 1111111 1479999999999999999999
Q ss_pred CCCc
Q psy11826 70 NPFA 73 (83)
Q Consensus 70 ~~~g 73 (83)
+..|
T Consensus 86 ~~~g 89 (212)
T 1f97_A 86 EEGG 89 (212)
T ss_dssp ETTS
T ss_pred ccCC
Confidence 8766
No 224
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.24 E-value=7.1e-11 Score=55.39 Aligned_cols=78 Identities=12% Similarity=0.184 Sum_probs=49.5
Q ss_pred CCceEEEEeEeCccC---CCeEEEEeCCEE--ecc---------------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP---RPHITWTKDDIE--LTF---------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~---~~~~~w~~~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
.|+.+.|.|...+.+ .+.+.|++.+.. +.. ..+..... ........+|.|.+++.+|+
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~~~sL~I~~v~~~D~ 97 (139)
T 1pko_A 20 VGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLK--ESIGEGKVALRIQNVRFSDE 97 (139)
T ss_dssp TTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEEC--TTGGGTEEEEEESSCCGGGC
T ss_pred eCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEcc--ccccCCeEEEEEccCCHHHC
Confidence 589999999986544 368999987631 100 01111100 00011245799999999999
Q ss_pred eEEEEEeeCCCcceeeEEEE
Q psy11826 62 GYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 62 g~y~C~~~~~~g~~~~~~~~ 81 (83)
|.|.|.+.+..+.....+.|
T Consensus 98 G~Y~C~v~~~~~~~~~~~~L 117 (139)
T 1pko_A 98 GGYTCFFRDHSYQEEAAVEL 117 (139)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEcCCCceEEEEEE
Confidence 99999999887765555544
No 225
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.24 E-value=1.5e-11 Score=61.04 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=50.3
Q ss_pred CCCceEEEEeEeCccC---C-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 1 MLGRKITFFCMAEGFP---R-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~---~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.+|+.+.|.|.+.+.+ . +.+.|++++..+...................+.|.|.+++.+|.|.|.|.+.+..+.
T Consensus 16 ~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 16 TITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp STTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred ccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 3689999999998874 2 489999998765432110000000111123457999999999999999999998774
No 226
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.24 E-value=1.2e-11 Score=62.76 Aligned_cols=73 Identities=14% Similarity=0.248 Sum_probs=49.8
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEe--cCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWF--LGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
|+.+.|.|.+.+. |. +.+.|++++..+............ +......+.|.|..+..+|.|.|.|.+.|.....
T Consensus 169 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 169 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 6689999999885 43 359999999877654111100000 0112235689999999999999999999987653
No 227
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.24 E-value=3.3e-11 Score=65.39 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.+ .+.+.|++++..+...................+.|.|..+..+|.|.|.|.+.|..+..
T Consensus 254 ~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 254 ISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp TTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSS
T ss_pred cCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCC
Confidence 588999999998874 35899999998775432111111111122345689999999999999999999987755
No 228
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.24 E-value=1.8e-11 Score=65.06 Aligned_cols=69 Identities=32% Similarity=0.415 Sum_probs=53.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+.... ......|.|..++.+|.|.|.|.+.|..|.......|
T Consensus 221 ~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-----------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 289 (382)
T 1cs6_A 221 TGQMVTLECFAFGNPVPQIKWRKLDGSQTSKW-----------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289 (382)
T ss_dssp TTCCEEEECEEEEESCCEEEEEECCSCCSCCC-----------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCcccccEE-----------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 58889999999999999999999876554311 0112469999999999999999999988876555443
No 229
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.24 E-value=2.3e-12 Score=67.67 Aligned_cols=80 Identities=23% Similarity=0.365 Sum_probs=56.5
Q ss_pred CCceEEEEeEe---CccC-CCeEEEEeCCEEecccc---eEE----EEEEecCCCeEEEEEEEccCCCCCC-eEEEEEee
Q psy11826 2 LGRKITFFCMA---EGFP-RPHITWTKDDIELTFHK---YFQ----VHEWFLGNNTIKSKMEIDPATQKDA-GYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~---~~~~-~~~~~w~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~l~i~~~~~~~~-g~y~C~~~ 69 (83)
.|+.+.|.|.+ .+.| .+.+.|++++..+.... ... ............+.|.|..+..+|. |.|.|.+.
T Consensus 240 ~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 319 (339)
T 3o4o_C 240 LGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVH 319 (339)
T ss_dssp CCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEE
T ss_pred cCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEE
Confidence 58889999999 8999 78899999887654211 000 0000112223345799999999997 99999999
Q ss_pred CCCcceeeEEEE
Q psy11826 70 NPFAIDRRGFRT 81 (83)
Q Consensus 70 ~~~g~~~~~~~~ 81 (83)
|..|.....+.+
T Consensus 320 N~~G~~~~~~~~ 331 (339)
T 3o4o_C 320 NTLSFQTLRTTV 331 (339)
T ss_dssp ETTEEECCBCCC
T ss_pred eccCceEEEEEh
Confidence 999988766544
No 230
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.24 E-value=8.9e-13 Score=65.34 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=51.6
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
|+.+.|.|.+.+. |. |.+.|++++..+...................+.|.|..+..+|.|.|.|.+.|..+....
T Consensus 128 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 128 TNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp TTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred CCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 6789999999886 54 799999999887643211000000011222456899999999999999999998776443
No 231
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.23 E-value=1.2e-10 Score=58.17 Aligned_cols=70 Identities=17% Similarity=0.280 Sum_probs=47.9
Q ss_pred CCceE-EEEeEe-CccCCCeEEEEeCCEEecccc----eEEEEEEec----CCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKI-TFFCMA-EGFPRPHITWTKDDIELTFHK----YFQVHEWFL----GNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~-~~~C~~-~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+ .+.|.+ .+.|.|.+.|++++..+.... ...+..... ......+.|.+......|.|.|.|.+.|.
T Consensus 132 ~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 132 EDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 46666 999998 889999999999998876543 333222111 11222356887644444599999999994
No 232
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.23 E-value=2.8e-11 Score=60.71 Aligned_cols=73 Identities=12% Similarity=0.246 Sum_probs=50.4
Q ss_pred CceEEEEeEeCcc-C-CCeEEEEeCCEEecccc-eE-EEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 3 GRKITFFCMAEGF-P-RPHITWTKDDIELTFHK-YF-QVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 3 g~~~~~~C~~~~~-~-~~~~~w~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
|+.+.+.|.+.+. | .+.+.|++++..+.... .. .............+.|.+.....+|.|.|.|.+.|.....
T Consensus 150 g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 150 SGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp HTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 6679999998874 4 57999999998876432 10 0000001122335678999999999999999999987543
No 233
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.23 E-value=4.8e-11 Score=59.09 Aligned_cols=70 Identities=19% Similarity=0.321 Sum_probs=48.8
Q ss_pred CCceEEEEeEeCcc----CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc--e
Q psy11826 2 LGRKITFFCMAEGF----PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI--D 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~--~ 75 (83)
.|+.+.+.|.+.+. |.|.+.|++++....... ....+.|.|..+...|.|.|.|.+.|..+. .
T Consensus 137 ~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~-----------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~ 205 (214)
T 2zg1_A 137 SGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE-----------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTT 205 (214)
T ss_dssp TTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS-----------CCCSSEEEECCCTTCCSCEEEEEEECC----CC
T ss_pred CCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC-----------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcce
Confidence 58899999998764 789999999875432111 111347889999888999999999997644 4
Q ss_pred eeEEEEe
Q psy11826 76 RRGFRTD 82 (83)
Q Consensus 76 ~~~~~~~ 82 (83)
...+.|.
T Consensus 206 ~~~v~l~ 212 (214)
T 2zg1_A 206 ERTVQLN 212 (214)
T ss_dssp EEEEECC
T ss_pred EEEEEEE
Confidence 4455443
No 234
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.23 E-value=1.3e-10 Score=64.18 Aligned_cols=76 Identities=14% Similarity=0.326 Sum_probs=53.1
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+........ ....+.....+.|.|..+...| |.|.|.+.|..|......
T Consensus 233 ~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~-~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~ 310 (523)
T 2rcj_C 233 SGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 310 (523)
T ss_pred cCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcE-ecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEE
Confidence 58899999999886 777 7999999876432110000 0011122335689999999999 999999999988754443
No 235
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.23 E-value=2.1e-10 Score=56.45 Aligned_cols=61 Identities=13% Similarity=0.260 Sum_probs=44.8
Q ss_pred eEEEEeEeCcc-CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCC-CCCeEEEEEeeCCCcceeeEEEE
Q psy11826 5 KITFFCMAEGF-PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ-KDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 5 ~~~~~C~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.+.|.|.+.+. |.|.+.|++++..+.... .|.|..... +|.|.|.|.+.|..|.....+.+
T Consensus 126 ~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~----------------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~~ 188 (193)
T 2if7_A 126 ELHLTCSVEDADDNVSFRWEALGNTLSSQP----------------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVSA 188 (193)
T ss_dssp EEEEEEEEESCCTTCEEEEEETTEEEESSS----------------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEEH
T ss_pred eEEEEEEEecCCCceEEEEEeCCEEcCCCC----------------eEEEEeccCcCCCCcEEEEEECCCCcccccccc
Confidence 79999999885 578999999987653222 244433333 48999999999999987666543
No 236
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.22 E-value=9.9e-11 Score=61.30 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=50.3
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|+| .+.|++++..+...................+.|.|......|.|.|.|.+.|..+.
T Consensus 131 ~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 131 PQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp TTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred CCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 58899999999988776 89999999887654321110001112233456777766666679999999997665
No 237
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.22 E-value=1.9e-11 Score=62.08 Aligned_cols=73 Identities=12% Similarity=0.136 Sum_probs=50.9
Q ss_pred CCceEEEEeEeCcc---CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF---PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~---~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |.+ .+.|++++..+...................+.|.|..++.+|.|.|.|.+.+..+.
T Consensus 31 ~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 107 (239)
T 1i1c_A 31 GGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFP 107 (239)
T ss_dssp SSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSS
T ss_pred cCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCC
Confidence 68999999998877 766 89999988655432110000111112234567999999999999999999998774
No 238
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.22 E-value=3.4e-11 Score=64.08 Aligned_cols=71 Identities=25% Similarity=0.462 Sum_probs=52.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEec------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELT------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.|.+.|++++.... ....... ....|.|..++.+|.|.|.|.+.|..|..
T Consensus 226 ~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 296 (388)
T 2v5m_A 226 VAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ---------VSGTLIIKDAVVEDSGKYLCVVNNSVGGE 296 (388)
T ss_dssp TTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE---------ETTEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred eCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec---------ccCEEEECcCCHHHCeEEEEEEecCCCce
Confidence 47889999999999999999998643222 1111110 12379999999999999999999999876
Q ss_pred eeEEEE
Q psy11826 76 RRGFRT 81 (83)
Q Consensus 76 ~~~~~~ 81 (83)
.....|
T Consensus 297 ~~~~~l 302 (388)
T 2v5m_A 297 SVETVL 302 (388)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 655544
No 239
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.22 E-value=7.4e-11 Score=66.42 Aligned_cols=59 Identities=24% Similarity=0.425 Sum_probs=50.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+.|.|.+.|+++|..+... ..|.|..+..+|.|.|.|.+.|..|...
T Consensus 395 ~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~----------------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 453 (642)
T 1e07_A 395 PGVNLSLSCHAASNPPAQYSWLIDGNIQQHT----------------QELFISNITEKNSGLYTCQANNSASGHS 453 (642)
T ss_pred CCCcEEEEEEcCccCCCeEEEEECCEEcCCC----------------ceEEEccCChhhCeEEEEEEEcCCCCCc
Confidence 5888999999999999999999999766532 2588899999999999999999887543
No 240
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.22 E-value=3.5e-11 Score=59.91 Aligned_cols=76 Identities=18% Similarity=0.407 Sum_probs=49.4
Q ss_pred CCceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+ .|.| .+.|++++..+......... ........+.|.|.. ...|.|.|.|.+.|..+......
T Consensus 138 ~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~--~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 138 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp CSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE--SSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTEEEEE
T ss_pred cCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcc--cCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCccEEE
Confidence 5889999999988 8888 99999988654211100000 011122345788844 44466999999999888755444
Q ss_pred E
Q psy11826 80 R 80 (83)
Q Consensus 80 ~ 80 (83)
.
T Consensus 215 ~ 215 (219)
T 1c1e_H 215 K 215 (219)
T ss_dssp E
T ss_pred e
Confidence 3
No 241
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.21 E-value=4.3e-11 Score=58.39 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=45.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+ +.+.+.|++++..... . ...|.|.+++.+|+|.|.|.+.|..|
T Consensus 21 ~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~-----------~----~~~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 21 LEKPVTLRCQGPP-GVDLYRLEKLSSSRYQ-----------D----QAVLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp TTCCEEEEEECST-TCSEEEEEETTTCCEE-----------S----SSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCcEEEEEeCCC-CCCEEEEEECCccccC-----------c----ccEEEECcCChhhCceEEEEEEcCCC
Confidence 5899999999877 7789999998764100 0 23699999999999999999998665
No 242
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.21 E-value=2.1e-10 Score=66.08 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=57.0
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.|.|.+.+.+.| .+.|++++..+........... ....+.|.|..+..+|.|.|.|.+.|..|.......
T Consensus 633 ~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 708 (816)
T 3dmk_A 633 VGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRV----GRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTP 708 (816)
T ss_dssp SSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEE----TTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEc----CCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEE
Confidence 58899999998766554 8999999988765433322211 112457999999999999999999999988766554
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
|
T Consensus 709 l 709 (816)
T 3dmk_A 709 L 709 (816)
T ss_dssp E
T ss_pred E
Confidence 4
No 243
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.21 E-value=4.7e-11 Score=59.24 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=48.8
Q ss_pred CCceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |. +.+.|+++|..+............+......+.|.+......|.|.|.|.+.|....
T Consensus 123 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 123 AKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred cCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 37889999999885 44 389999999877542211111111122334556777777777899999999987643
No 244
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.21 E-value=1.5e-11 Score=62.79 Aligned_cols=63 Identities=22% Similarity=0.183 Sum_probs=48.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+.... .+ ..++.+|.|.|.|.+.|..|.....+.|
T Consensus 199 ~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g----------------~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 260 (265)
T 2oz4_A 199 ENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG----------------ES--VTVTRDLEGTYLCRARSTQGEVTREVTV 260 (265)
T ss_dssp TTCEECCCCCCEEESCCEEEEEETTTEECCTT----------------SC--EECCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEeECccCCCCeEEEEECCcccCCCC----------------cE--EEeehhhCeEEEEEEECCCCcEEEEEEE
Confidence 57889999999999999999999887222111 11 1377899999999999999988776655
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 261 ~ 261 (265)
T 2oz4_A 261 N 261 (265)
T ss_dssp E
T ss_pred E
Confidence 3
No 245
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.21 E-value=2.3e-11 Score=60.04 Aligned_cols=74 Identities=26% Similarity=0.360 Sum_probs=50.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceE--EEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYF--QVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+...... ........+......+.+.+++..|.|.|.|.+.+..|..
T Consensus 23 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 98 (212)
T 2v9r_A 23 KGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEA 98 (212)
T ss_dssp TTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCce
Confidence 6899999999999999999999999877643210 0000001111112235556778999999999999887754
No 246
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.21 E-value=6.1e-11 Score=58.73 Aligned_cols=68 Identities=18% Similarity=0.261 Sum_probs=49.0
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEEecccceEEEEEE--ecCCCeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEW--FLGNNTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
.|+.+.|.|.+.+ .|.|.+.|++++..+........... ........+.|.|..+...|.|.|.|.+.
T Consensus 128 ~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 128 ATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 4788999999988 89999999999987764220010000 01122334679999999999999999998
No 247
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.20 E-value=1.5e-11 Score=61.73 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=52.8
Q ss_pred CceEEEEeEeCccCC--CeEEEEeCCEEecccceEE-EEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 3 GRKITFFCMAEGFPR--PHITWTKDDIELTFHKYFQ-VHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 3 g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
|+.+.+.|.+.+.++ +.+.|++++..+....... ............+.|.|..+..+|.|.|.|.+.|..+.....+
T Consensus 150 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 150 ANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp TSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 678899999988644 3899999998876432100 0000011123346789999999999999999999887655544
No 248
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.20 E-value=3.8e-10 Score=56.54 Aligned_cols=77 Identities=13% Similarity=0.281 Sum_probs=51.4
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCC--CCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ--KDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+. |.| .+.|++ ++..+......... .........+.|.|..... .|.|.|.|.+.|..+...
T Consensus 140 ~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 140 PSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSV-LRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCE-EETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred CCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCcc-ccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 57889999999886 777 899999 88766531000000 0011122345688877765 778999999999988765
Q ss_pred eEE
Q psy11826 77 RGF 79 (83)
Q Consensus 77 ~~~ 79 (83)
...
T Consensus 219 ~~~ 221 (223)
T 1dee_B 219 KDV 221 (223)
T ss_dssp EEE
T ss_pred ccc
Confidence 543
No 249
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.20 E-value=5.3e-11 Score=58.50 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=48.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|. .+.|++++..+...... .........|.|.+++.+|+|.|.|.+.|..|
T Consensus 18 ~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (196)
T 2d3v_A 18 RGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQN------PLEPKNKARFSIPSMTEHHAGRYRCYYYSPAG 82 (196)
T ss_dssp TTCCEEEEEECCTTCC-EEEEEETTCSSCSEEEC------CCSSTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCeEEEEEeCCCCCc-EEEEEECCCCCCccccc------ccCCccccEEEeccCChhHCeEEEEEEeCCCC
Confidence 5899999999887765 89999998765432100 00111245799999999999999999988765
No 250
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.19 E-value=1.6e-11 Score=66.59 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=49.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.|.+.|.|.|.+.|++++..+..... .+ .++.+|+|.|.|.+.|..|.....+.|
T Consensus 384 ~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~---------------~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l 445 (450)
T 1z7z_I 384 ENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE---------------SV---TVTRDLEGTYLCRARSTQGEVTREVTV 445 (450)
T ss_dssp TTCEECCCCCCEEESCCEEEEEETTTEECCTTS---------------CE---ECCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEEecccCCCCcEEEEECCcccCCCCC---------------eE---eEehhhCeEEEEEEEeCCCceeEEEEE
Confidence 578899999999999999999999873332110 12 477899999999999999988777665
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 446 ~ 446 (450)
T 1z7z_I 446 N 446 (450)
T ss_dssp E
T ss_pred E
Confidence 3
No 251
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.19 E-value=5.8e-11 Score=53.94 Aligned_cols=80 Identities=18% Similarity=0.261 Sum_probs=48.1
Q ss_pred CCceEEEEeEe-CccCCCe----EEEEeCCEEecc-------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMA-EGFPRPH----ITWTKDDIELTF-------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~----~~w~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.. .+.+.+. +.|++.+..... ..+...............+|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (118)
T 3udw_C 14 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGN 93 (118)
T ss_dssp TTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGCEE
T ss_pred eCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHCeE
Confidence 58999999998 4454443 899987422110 00111000000000014579999999999999
Q ss_pred EEEEeeC-CCcceeeEEEE
Q psy11826 64 YECVADN-PFAIDRRGFRT 81 (83)
Q Consensus 64 y~C~~~~-~~g~~~~~~~~ 81 (83)
|.|.+.+ ..+.......|
T Consensus 94 Y~C~v~~~~~~~~~~~~~L 112 (118)
T 3udw_C 94 YTCLFVTFPQGSRSVDIWL 112 (118)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCCCCccceEEE
Confidence 9999988 66655544444
No 252
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.19 E-value=9.7e-12 Score=65.29 Aligned_cols=73 Identities=23% Similarity=0.358 Sum_probs=54.3
Q ss_pred CCceEEEEeEeC-------ccCCCeEEEEeCCEEe--cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAE-------GFPRPHITWTKDDIEL--TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~-------~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.+. +.|.+.+.|++++..+ ......++.. ....|.|.+++.+|.|.|.|.+.|..
T Consensus 32 ~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~n~~ 104 (339)
T 3o4o_C 32 EGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA-------QDGALWLLPALQEDSGTYVCTTRNAS 104 (339)
T ss_dssp TTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE-------ETTEEEESSBCTTCCEEEECCEEETT
T ss_pred CCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe-------eCCeEEECCCCcccCEEEEEEEECCc
Confidence 589999999987 8889999999988764 2221111111 02379999999999999999999988
Q ss_pred cceeeEEEE
Q psy11826 73 AIDRRGFRT 81 (83)
Q Consensus 73 g~~~~~~~~ 81 (83)
|.....+.|
T Consensus 105 g~~~~~~~l 113 (339)
T 3o4o_C 105 YCDKMSIEL 113 (339)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEEE
Confidence 766555544
No 253
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.19 E-value=3.7e-11 Score=63.74 Aligned_cols=61 Identities=10% Similarity=0.084 Sum_probs=48.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
.|+.+.|.|.+.+.|.|.+.|++++..+... ...|.|.+++.+|.|.|.|.+.+..+....
T Consensus 110 ~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---------------~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~ 170 (363)
T 1wio_A 110 QGQSLTLTLESPPGSSPSVQCRSPRGKNIQG---------------GKTLSVSQLELQDSGTWTCTVLQNQKKVEF 170 (363)
T ss_dssp SBSCEEEEEECCTTCCCCEEEECSSSCEEEE---------------SSEEEECSBCGGGCEECEEEEEETTEEEEE
T ss_pred cCCCEEEEEEcCCCCCCeEEEEcCCCccccc---------------ceEEEEeeCChhcCCEEEEEEecCCCeEEE
Confidence 5889999999989999999999987533111 247999999999999999999887655443
No 254
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.19 E-value=8.7e-11 Score=57.30 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=46.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.+ +.+.|++++..+...... ......|.|..++.+|.|.|.|.+.|..+
T Consensus 107 ~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~---------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 107 SGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPE---------RWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp CTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCC---------EEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CCCcEEEEEEcCCCC-cEEEEEECCCcCcceecC---------CCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 588999999976554 689999998766542111 11134688899999999999999999754
No 255
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.19 E-value=3.4e-10 Score=56.02 Aligned_cols=67 Identities=18% Similarity=0.292 Sum_probs=47.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++. +.... ...++.... ......|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 14 LGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-----SGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp TTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-----cCCEEEEEECCCChhhCEEEEEE
Confidence 689999999999999999999982 21110 011222111 11245799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 89 ~~~~~~ 94 (213)
T 3mj8_L 89 SWDGTN 94 (213)
T ss_dssp EEETTT
T ss_pred eccCCc
Confidence 998776
No 256
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.18 E-value=2.6e-10 Score=57.72 Aligned_cols=73 Identities=16% Similarity=0.379 Sum_probs=46.2
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEeccc------ce-EEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFH------KY-FQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+ .|.| .+.|++++..+... .. ..............+.|.+......|.|.|.|.+.|..+
T Consensus 133 ~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~ 212 (248)
T 3pv7_A 133 ENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASL 212 (248)
T ss_dssp ---CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTC
T ss_pred CCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCC
Confidence 566779999988 7888 99999988543321 10 111111112233456788888888899999999999877
Q ss_pred ce
Q psy11826 74 ID 75 (83)
Q Consensus 74 ~~ 75 (83)
..
T Consensus 213 ~~ 214 (248)
T 3pv7_A 213 HT 214 (248)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 257
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.18 E-value=5e-10 Score=50.80 Aligned_cols=66 Identities=18% Similarity=0.353 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeC--CE----EecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKD--DI----ELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|...+. +.+.+.|++. +. .+....++..... .......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 14 TGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVD---KGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEe---CCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 68999999998765 5678999974 22 1111222322111 111245799999999999999999987
No 258
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.18 E-value=5.2e-10 Score=55.36 Aligned_cols=68 Identities=16% Similarity=0.322 Sum_probs=47.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEe----------c--ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IEL----------T--FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~----------~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|+++. ..+ . ...++.... ......|.|.+++.+|.|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 15 PGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-----SGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-----CCCEEEEEECCCChhhCEEEEEe
Confidence 6899999999999988999998742 111 0 011222111 11134799999999999999999
Q ss_pred eeCCCcc
Q psy11826 68 ADNPFAI 74 (83)
Q Consensus 68 ~~~~~g~ 74 (83)
+.+..+.
T Consensus 90 ~~~~~~~ 96 (213)
T 3d9a_L 90 QSNSWPY 96 (213)
T ss_dssp ECSSSSC
T ss_pred eecCCcc
Confidence 9987654
No 259
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.18 E-value=2.3e-10 Score=51.53 Aligned_cols=62 Identities=15% Similarity=0.187 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|++++|.|...+. .+.+.|++++..+.... .........|.|..++.+|+|.|.|.+.+..
T Consensus 18 ~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~~--------~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 18 LGDTVTLRCHLPRM-AAWVQLWLNGTLRFDKE--------KDKEQDAAEFSFAVTNLEDAGTYQCRYQVSE 79 (105)
T ss_dssp TTCEEEEEEECCSS-CEEEEEEETTEEEEEEE--------ECTTCSEEEEEEECCSGGGCEEEEEEEEEET
T ss_pred cCCCEEEEEEcCCC-CcEEEEEECCccceeee--------ccCCCCEEEEEECCCCHHHCeEEEEEEEcCC
Confidence 58999999997654 35678999986543210 0112224579999999999999999998753
No 260
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.17 E-value=7.7e-11 Score=60.09 Aligned_cols=80 Identities=11% Similarity=0.137 Sum_probs=52.0
Q ss_pred CCceEEEEeEe---CccCCCeEEEEeC-CEEecccceEEEE-------EE-----------ecCCCeEEEEEEEccCCCC
Q psy11826 2 LGRKITFFCMA---EGFPRPHITWTKD-DIELTFHKYFQVH-------EW-----------FLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 2 ~g~~~~~~C~~---~~~~~~~~~w~~~-~~~~~~~~~~~~~-------~~-----------~~~~~~~~~~l~i~~~~~~ 59 (83)
.|+.+.|.|.+ .+.|.|.+.|+++ +............ .. ..........|.|..++.+
T Consensus 132 ~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~ 211 (268)
T 3mj6_A 132 VGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKES 211 (268)
T ss_dssp TTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGG
T ss_pred cCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChh
Confidence 58889999998 6779999999984 3211111000000 00 0000012347999999999
Q ss_pred CCeEEEEEeeCCCcceeeEEEE
Q psy11826 60 DAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 60 ~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
|.|.|.|.+.|..|.....+.|
T Consensus 212 D~G~Y~C~a~n~~g~~~~~~~l 233 (268)
T 3mj6_A 212 DQGIYTCSIYVGKLESRKTIVL 233 (268)
T ss_dssp GCEEEEEEEEETTEEEEEEEEE
T ss_pred hCeEEEEEEEcCCceEEEEEEE
Confidence 9999999999988877666554
No 261
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.17 E-value=1.1e-10 Score=60.67 Aligned_cols=65 Identities=22% Similarity=0.358 Sum_probs=51.3
Q ss_pred CCceEEEEeEe------CccCCCeEEEEeCCEEecccc-eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEee-CCCc
Q psy11826 2 LGRKITFFCMA------EGFPRPHITWTKDDIELTFHK-YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVAD-NPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~------~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~-~~~g 73 (83)
.|+.+.|.|.+ .+.|.|.+.|++++..+.... ..... ...|.|.+++.+|.|.|.|.+. |..|
T Consensus 117 ~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~~n~~g 187 (315)
T 1itb_B 117 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV---------KDRLIVMNVAEKHRGNYTCHASYTYLG 187 (315)
T ss_dssp TTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEE---------TTEEEESSCCGGGCEEEEEEEEEEETT
T ss_pred cCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeec---------CceEEEEeceehhCcEEEEEEEcCCCC
Confidence 47889999998 788999999999998875432 11110 2379999999999999999999 6777
Q ss_pred ce
Q psy11826 74 ID 75 (83)
Q Consensus 74 ~~ 75 (83)
..
T Consensus 188 ~~ 189 (315)
T 1itb_B 188 KQ 189 (315)
T ss_dssp EE
T ss_pred cE
Confidence 65
No 262
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.17 E-value=4.4e-11 Score=59.28 Aligned_cols=74 Identities=19% Similarity=0.396 Sum_probs=50.2
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ........+.|.|..+...+ |.|.|.+.|..+.....
T Consensus 132 ~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 132 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCcc--CCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 57889999999886 888 99999988653211100000 01112234578998888766 99999999998876443
No 263
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.17 E-value=3.6e-10 Score=56.83 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE-----Eec---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI-----ELT---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.|.+.|++++. .+. ...++.... ........|.|.+++.+|+|.|.|.
T Consensus 141 ~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~ 217 (238)
T 2p1y_A 141 EGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFF---NKREKKLSLHIADSQPGDSATYFCA 217 (238)
T ss_dssp TTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEE---ETTTTEEEEEETTCCGGGCEEEEEE
T ss_pred CCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEe---cCCCCeEEEEEcCCCHHHCEEEEEE
Confidence 58899999999999999999998531 110 011111110 0111235799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.|..
T Consensus 218 a~n~~ 222 (238)
T 2p1y_A 218 AIDTN 222 (238)
T ss_dssp EEETT
T ss_pred EeeCC
Confidence 99873
No 264
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.17 E-value=4.9e-11 Score=59.63 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=48.2
Q ss_pred CCceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.| .|.+ .+.|++++..+............+......+.|.+......|.|.|.|.+.|....
T Consensus 131 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 131 SRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp TSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred cCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 4788999999998 5665 89999999877532211111111122334456777666666789999999997654
No 265
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.17 E-value=2.7e-10 Score=61.79 Aligned_cols=65 Identities=12% Similarity=0.230 Sum_probs=51.1
Q ss_pred CCceEEEEeEeCccCCC---eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRP---HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.|++ .+.|++++..+..... ........|.|..+...|.|.|.|.+.|..|.
T Consensus 100 ~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~--------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 167 (450)
T 1z7z_I 100 VGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA--------VGEPAEVTTTVLVRRDHHGANFSCRTELDLRP 167 (450)
T ss_dssp TTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC--------CTTTEEEEEEEECCSSCSSCEEEEEEEEECGG
T ss_pred eCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccc--------cccccceEEEEEeeccccCceEEEEEEcccCC
Confidence 58999999999998888 8999999987653221 01122357999999999999999999988664
No 266
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.16 E-value=2.4e-10 Score=59.91 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=51.0
Q ss_pred ceEEEEeEeCcc-C-CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceee
Q psy11826 4 RKITFFCMAEGF-P-RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRR 77 (83)
Q Consensus 4 ~~~~~~C~~~~~-~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~ 77 (83)
+.+.|.|.+.+. | .+.+.|+++|..+...................+.|.|......|.|.|.|.+.|..+....
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 100 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED 100 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcce
Confidence 589999999886 4 4689999999888754321111111222233457888888778999999999988765543
No 267
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.16 E-value=7.9e-11 Score=58.33 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=49.3
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCCEEecccc-eEE-EEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDDIELTFHK-YFQ-VHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.++ +.+.|++++..+.... ... ............+.|.+......|.|.|.|.+.|....
T Consensus 126 ~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 126 GTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 3667999999988654 3799999998876531 110 00000112233457888888888999999999987644
No 268
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.16 E-value=2.9e-10 Score=58.46 Aligned_cols=68 Identities=28% Similarity=0.491 Sum_probs=51.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.|. .+.|++ ++..+....+...... . ..+.|.|.+++.+|.|.|.|.+.+..|..
T Consensus 18 ~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~--~---~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~ 86 (291)
T 2wim_A 18 VGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKE--G---VRSRLTIYNANIEDAGIYRCQATDAKGQT 86 (291)
T ss_dssp TTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEE--T---TEEEEEECSCCGGGCEEEEEEEECSSSCE
T ss_pred CCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecC--C---CEEEEEEccCCcccCEEEEEEEecccCce
Confidence 5889999999988775 899998 6666654444333221 1 13579999999999999999999988765
No 269
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.16 E-value=4.3e-10 Score=54.54 Aligned_cols=58 Identities=24% Similarity=0.379 Sum_probs=43.4
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
+|+.+.|.|.+.+.|.| .+.|++++..+....... ....|.+. +.+|.|.|.|.+.+.
T Consensus 12 ~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~----------~~~~l~i~--~~~d~G~Y~C~~~n~ 71 (184)
T 3b5h_A 12 LGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG----------QKTEFKVD--SDDQWGEYSCVFLPE 71 (184)
T ss_dssp ETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC----------SEEEEEEC--GGGCCEEEEEEEEST
T ss_pred cCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC----------CcEEEEEe--chhhCeEEEEEEECC
Confidence 58999999998887777 899999998776443111 12345555 588999999999973
No 270
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.16 E-value=2e-10 Score=52.18 Aligned_cols=68 Identities=18% Similarity=0.280 Sum_probs=45.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEec----------ccceEEEEEEecCC-CeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IELT----------FHKYFQVHEWFLGN-NTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~~----------~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.+.|.|.+.+.+ +.+.|++.. .... ...+.... ... .....+|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~---~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 90 (113)
T 1h5b_A 15 EGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSA---FDSERARYSTLHIRDAQLEDSGTYFCAA 90 (113)
T ss_dssp TTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEE---CCSSSSSEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEE---EccCCCCEEEEEECCCChhhCEEEEEEE
Confidence 589999999987654 689998743 1110 01111111 111 233557999999999999999999
Q ss_pred eCCCc
Q psy11826 69 DNPFA 73 (83)
Q Consensus 69 ~~~~g 73 (83)
.+..+
T Consensus 91 ~n~~~ 95 (113)
T 1h5b_A 91 EASSG 95 (113)
T ss_dssp ECSSS
T ss_pred ecCCC
Confidence 98654
No 271
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.15 E-value=3.1e-11 Score=59.05 Aligned_cols=69 Identities=16% Similarity=0.343 Sum_probs=49.7
Q ss_pred CCceEEEEeE-eCccCC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCM-AEGFPR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~-~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|. ..+.|. +.+.|++++..+.......... ... ...|.|.+++.+|.|.|.|.+.+..+..
T Consensus 22 ~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~--~~~---~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 22 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFV--SQT---NGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp TTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEE--CTT---TCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEE--EcC---CCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 5889999999 888898 9999999886654211100000 011 2369999999999999999999865543
No 272
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.15 E-value=5e-11 Score=63.11 Aligned_cols=73 Identities=14% Similarity=0.207 Sum_probs=54.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCe-EEEEEeeCCCcceeeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG-YYECVADNPFAIDRRGFR 80 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g-~y~C~~~~~~g~~~~~~~ 80 (83)
.|+.+.+.|.+.+.|.|.+.|++++..+..... .........|.|..++.+|.| .|.|.+.|..|.....+.
T Consensus 172 ~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~-------~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~ 244 (347)
T 2ifg_A 172 VGDDVLLRCQVEGRGLEQAGWILTELEQSATVM-------KSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQ 244 (347)
T ss_dssp TTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC-------CCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEEC
T ss_pred CCCcEEEEEEEecCCCCEEEEEcCCceeecccc-------cceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEE
Confidence 588999999999999999999998865432211 011122457999999999999 999999998877655443
Q ss_pred E
Q psy11826 81 T 81 (83)
Q Consensus 81 ~ 81 (83)
+
T Consensus 245 l 245 (347)
T 2ifg_A 245 V 245 (347)
T ss_dssp C
T ss_pred E
Confidence 3
No 273
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.15 E-value=5.3e-11 Score=59.66 Aligned_cols=61 Identities=16% Similarity=0.255 Sum_probs=46.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.++|.|...+.+.+.+.|+++|..+.... .. .. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 119 ~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~--~~----~~---~~~~L~I~~v~~~D~G~Y~C~a~n~ 179 (218)
T 1uct_A 119 PGENISLTCSSAHIPFDRFSLAKEGELSLPQH--QS----GE---HPANFSLGPVDLNVSGIYRCYGWYN 179 (218)
T ss_dssp TTCCCEEEEECSSSCCSEEEEEETTCSSCCSE--EE----CS---SSEEEECCSCCGGGCEEEEEEEECT
T ss_pred CCCCEEEEEeCCCCCCCEEEEEECCCcccccc--cC----CC---ccCEEEEccCCcccCEEEEEEEEcC
Confidence 58899999976777888999999987665421 00 01 1357999999999999999999875
No 274
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.14 E-value=1.6e-09 Score=54.76 Aligned_cols=67 Identities=16% Similarity=0.339 Sum_probs=46.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEe----------------CCEEeccc---ceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK----------------DDIELTFH---KYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~----------------~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
+|+.+.|.|.+.+.+.+.+.|++ ++...... .++.+... . ....+|.|.+++.+|+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~--~~~~~L~I~~v~~~D~G 90 (246)
T 4dzb_B 15 SGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA--S--LTLSTLTVTSAHPEDSS 90 (246)
T ss_dssp TTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEE--E--TTEEEEEECSCCGGGCE
T ss_pred CCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEec--C--CCEEEEEECCCCHHHCE
Confidence 58999999999999999999998 11111111 22222211 0 11357999999999999
Q ss_pred EEEEEeeCCC
Q psy11826 63 YYECVADNPF 72 (83)
Q Consensus 63 ~y~C~~~~~~ 72 (83)
.|.|.+.+..
T Consensus 91 ~Y~C~~~~~~ 100 (246)
T 4dzb_B 91 FYICSARTSG 100 (246)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEecCC
Confidence 9999998654
No 275
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.14 E-value=1.8e-10 Score=55.82 Aligned_cols=72 Identities=17% Similarity=0.208 Sum_probs=47.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCe-----EEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNT-----IKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.++|.|... .|.+.+.|++++..+................+ ...+|.|.+++.+|+|.|.|.+.+..+.
T Consensus 9 ~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~~ 85 (171)
T 1ccz_A 9 VYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDT 85 (171)
T ss_dssp TTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCSC
T ss_pred cCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCCc
Confidence 689999999974 48889999998764322110000000000000 1246999999999999999999988773
No 276
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.14 E-value=1.1e-10 Score=53.24 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=46.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc--------cceEEEEEE-ecCCC--eEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF--------HKYFQVHEW-FLGNN--TIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~--------~~~~~~~~~-~~~~~--~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|.......+.+.|++....... ......... ..+.. ..+.+|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Ytc~v~~ 93 (111)
T 2qsq_A 14 EGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFYTLHVIK 93 (111)
T ss_dssp TTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEEEEEEEe
Confidence 688999999843333456899986532210 000000000 00000 0123799999999999999999998
Q ss_pred CCc-ceeeEEEE
Q psy11826 71 PFA-IDRRGFRT 81 (83)
Q Consensus 71 ~~g-~~~~~~~~ 81 (83)
..+ .......|
T Consensus 94 ~~~~~~~~~~~L 105 (111)
T 2qsq_A 94 SDLVNEEATGQF 105 (111)
T ss_dssp TTSCCEEEEEEE
T ss_pred CCCcEEEEEEEE
Confidence 765 33434333
No 277
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.14 E-value=4.9e-11 Score=54.62 Aligned_cols=79 Identities=11% Similarity=0.192 Sum_probs=49.5
Q ss_pred CCceEEEEeEeCccCC----CeEEEEeCC-------EEecc-c-------------ceEEEEEEecCCCeEEEEEEEccC
Q psy11826 2 LGRKITFFCMAEGFPR----PHITWTKDD-------IELTF-H-------------KYFQVHEWFLGNNTIKSKMEIDPA 56 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~----~~~~w~~~~-------~~~~~-~-------------~~~~~~~~~~~~~~~~~~l~i~~~ 56 (83)
.|+.+.|.|...+.+. +.+.|++.+ ..+.. . .+..... ........+|.|.++
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~sL~I~~v 96 (126)
T 1eaj_A 19 KGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTS--NDLKSGDASINVTNL 96 (126)
T ss_dssp TTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECC--SCGGGTBCCEEECSC
T ss_pred eCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEc--ccccCCeEEEEECcC
Confidence 5889999999876554 459999753 22110 0 0111000 000011246999999
Q ss_pred CCCCCeEEEEEeeCCCcceeeEEEEe
Q psy11826 57 TQKDAGYYECVADNPFAIDRRGFRTD 82 (83)
Q Consensus 57 ~~~~~g~y~C~~~~~~g~~~~~~~~~ 82 (83)
+.+|+|.|.|.+.+..+.....+.|.
T Consensus 97 ~~~D~G~Y~C~v~~~~~~~~~~~~L~ 122 (126)
T 1eaj_A 97 QLSDIGTYQCKVKKAPGVANKKIHLV 122 (126)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ChHHCeEEEEEEEcCCccCCcEEEEE
Confidence 99999999999998877666555543
No 278
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.14 E-value=1.1e-09 Score=55.28 Aligned_cols=78 Identities=13% Similarity=0.265 Sum_probs=50.2
Q ss_pred CC-ceEEEEeEeCcc-CCC-eEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCC--CCCeEEEEEeeCCCcce
Q psy11826 2 LG-RKITFFCMAEGF-PRP-HITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ--KDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g-~~~~~~C~~~~~-~~~-~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~--~~~g~y~C~~~~~~g~~ 75 (83)
.| +.+.|.|.+.+. |.| .+.|++ ++..+.......... ........+.|.|..... .|.|.|.|.+.|..+..
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~ 217 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVL-RGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNK 217 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEE-ETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccc-cCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCc
Confidence 35 789999998876 776 899999 887765410000000 011122345788888776 78999999999998875
Q ss_pred eeEEE
Q psy11826 76 RRGFR 80 (83)
Q Consensus 76 ~~~~~ 80 (83)
.....
T Consensus 218 ~~~~~ 222 (232)
T 1dn0_B 218 EKNVP 222 (232)
T ss_dssp EEEEE
T ss_pred ceeEe
Confidence 44433
No 279
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.14 E-value=1.1e-09 Score=54.16 Aligned_cols=69 Identities=19% Similarity=0.295 Sum_probs=48.0
Q ss_pred CCCceEEEEeEeCccCCCeEEEEeC--CEEe---c---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 1 MLGRKITFFCMAEGFPRPHITWTKD--DIEL---T---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~~~~~~w~~~--~~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
..|+.+.|.|.+.+.|.+.+.|+++ +..+ . ...++.... ......|.|.+++.+|.|.|.|
T Consensus 13 ~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 13 SPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-----SGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp CTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEE
T ss_pred cCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-----cCCEEEEEECCCCHHHCeEEEE
Confidence 3689999999999988889999873 2211 0 011222111 0113479999999999999999
Q ss_pred EeeCCCcc
Q psy11826 67 VADNPFAI 74 (83)
Q Consensus 67 ~~~~~~g~ 74 (83)
.+.+..+.
T Consensus 88 ~~~~~~~~ 95 (210)
T 1lk3_L 88 QQSWNGPL 95 (210)
T ss_dssp EECSSSSC
T ss_pred EEEcCCCc
Confidence 99987653
No 280
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.14 E-value=7.5e-10 Score=54.80 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=47.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|++.. .. +.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3nl4_L 15 VGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG-----SGTDFTLTISDLECADAATYYCQ 89 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec-----CCCEEEEEECCCChHHCEEEEEe
Confidence 5899999999999999999999832 11 100 11222111 11134799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 90 ~~~~~~ 95 (213)
T 3nl4_L 90 STYENP 95 (213)
T ss_dssp ECCSST
T ss_pred cCCCCc
Confidence 998665
No 281
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.13 E-value=1.2e-10 Score=57.76 Aligned_cols=74 Identities=15% Similarity=0.213 Sum_probs=45.3
Q ss_pred CCceEEEEeEeCccCC----CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR----PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~----~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.++ +.+.|++++..+.............+.....+.|.|......|.|.|.|.+.|..+..
T Consensus 17 ~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 17 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp TTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred cCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 6899999999988753 4899999997665321100000001111223344444444445999999999987653
No 282
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.13 E-value=1.2e-10 Score=58.24 Aligned_cols=74 Identities=14% Similarity=0.259 Sum_probs=50.1
Q ss_pred CCceEEEEeEeCcc-CC--CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGF-PR--PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+. |. +.+.|++++..+.... ..............+.|.|......|.|.|.|.+.|..+...
T Consensus 136 ~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 136 SSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVN-FPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEE-CCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCCcEEEEEEEEeEECCCcEEEEEecCCEecceEe-cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 47889999998886 65 6899999886542100 000000111223345789988888899999999999887654
No 283
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.13 E-value=2.6e-10 Score=56.67 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=48.2
Q ss_pred CCceEEEEeEeCccCC-----CeEEEEeCCEEeccc---------------ceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFPR-----PHITWTKDDIELTFH---------------KYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-----~~~~w~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
.|+.+.|.|.+.+.|. +.+.|++++..+... .+..... ........+|.|.+++.+|.
T Consensus 15 ~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~--~~~~~~~~~L~I~~v~~~D~ 92 (222)
T 3sbw_C 15 YGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLK--DQLSLGNAALQITDVKLQDA 92 (222)
T ss_dssp TTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECH--HHHTTTEEEEEESSCCGGGC
T ss_pred cCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEcc--ccccCCEEEEEEcCcccccC
Confidence 5899999999876663 489999976332110 0111000 00011235799999999999
Q ss_pred eEEEEEeeCCCcceeeEEE
Q psy11826 62 GYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 62 g~y~C~~~~~~g~~~~~~~ 80 (83)
|.|.|.+.+ .+.....+.
T Consensus 93 G~Y~C~~~~-~~~~~~~~~ 110 (222)
T 3sbw_C 93 GVYRCMISY-GGADYKRIT 110 (222)
T ss_dssp EEEEEEEES-SSEEEEEEE
T ss_pred eEEEEEEEe-CCCceeEEE
Confidence 999999998 444444433
No 284
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.13 E-value=6.6e-11 Score=60.12 Aligned_cols=72 Identities=14% Similarity=0.264 Sum_probs=49.3
Q ss_pred CceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEE--ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEW--FLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
|+.+.+.|.+.+. |.+ .+.|++++..+........... .+......+.|.|..+..+|.|.|.|.+.|....
T Consensus 165 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 165 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp HTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 6789999999884 443 6999999987754311100000 0111234567999999999999999999997654
No 285
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.13 E-value=1.1e-10 Score=58.93 Aligned_cols=72 Identities=13% Similarity=0.279 Sum_probs=49.8
Q ss_pred CCceEEEEeEeCcc-CC-C-eEEEEeCCEEe-cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF-PR-P-HITWTKDDIEL-TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~-~-~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |. | .+.|+++|..+ ...... ............+.|.|..+..+|.|.|.|.+.+..+.
T Consensus 27 ~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~-~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 27 ISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMV-LQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELP 102 (231)
T ss_dssp TSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCE-EEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred cCCceEEEEEEeCccCCCCeEEEEEcCCeecccccccc-ceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCC
Confidence 58899999999885 63 5 99999988766 221111 11111112234567999999999999999999987654
No 286
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.13 E-value=1.3e-09 Score=56.13 Aligned_cols=63 Identities=16% Similarity=0.315 Sum_probs=44.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. +.|++++..+... .. ........+.|.|..++.+|+|.|.|.+.|..|.
T Consensus 14 ~G~~v~L~C~~~~~----v~W~~~~~~~~~~--~~----~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~ 76 (289)
T 3mjg_X 14 VSSTFVLTCSGSAP----VVWERMSQEPPQE--MA----KAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGL 76 (289)
T ss_dssp TTCCEEEEEEESSC----CEEEBTTBCCSEE--EE----ECTTSCEEEEEEECSCCGGGCEEEEEECCC----
T ss_pred CCCcEEEEEeccce----EEEECCCCCcccc--ee----ccCCCceeEEEEEccCChhhCEEEEEEEcccCCC
Confidence 58999999998764 8999998776321 11 1122223468999999999999999999998765
No 287
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.13 E-value=8.3e-10 Score=49.81 Aligned_cols=66 Identities=15% Similarity=0.312 Sum_probs=44.4
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EE----ecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IE----LTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|...+.+ .+.+.|++.. .. +....++..... .......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 14 TGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVD---EGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp TTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEc---CCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 689999999987653 5689999742 21 111222322111 111246799999999999999999976
No 288
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.13 E-value=6.4e-10 Score=56.24 Aligned_cols=66 Identities=17% Similarity=0.277 Sum_probs=47.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++ ++..+.. ..++... .......|.|.+++.+|+|.|.|.
T Consensus 149 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~L~I~~v~~~D~G~Y~C~ 223 (247)
T 2ghw_B 149 PGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGS-----GSGTDFTLTISRLEPEDFAVYYCQ 223 (247)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-----CSSSEEEEEECSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEe-----cCCCeEEEEECcCCHHHCEEEEEE
Confidence 58899999999999989999998 4433210 1111110 112245799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.+..
T Consensus 224 a~~~~ 228 (247)
T 2ghw_B 224 QRSNW 228 (247)
T ss_dssp ECSSS
T ss_pred EccCC
Confidence 98753
No 289
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.12 E-value=1.8e-09 Score=61.77 Aligned_cols=80 Identities=19% Similarity=0.280 Sum_probs=50.6
Q ss_pred CCceEEEEeEeCc--cCCCeEEEEeCCEEecccceEEEEEEec---CCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEG--FPRPHITWTKDDIELTFHKYFQVHEWFL---GNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~--~~~~~~~w~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+ .+.+.+.|++++..+............. ......+.|.|..++.+|.|.|.|.+.|..+...
T Consensus 238 ~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 317 (772)
T 3v2a_R 238 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 317 (772)
T ss_dssp TTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEE
T ss_pred cCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCccee
Confidence 5889999999877 4556899999887654422211100000 1223456899999999999999999999887655
Q ss_pred eEEEE
Q psy11826 77 RGFRT 81 (83)
Q Consensus 77 ~~~~~ 81 (83)
....|
T Consensus 318 ~~~~l 322 (772)
T 3v2a_R 318 NSTFV 322 (772)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54443
No 290
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.12 E-value=2.3e-10 Score=61.81 Aligned_cols=73 Identities=12% Similarity=0.257 Sum_probs=51.8
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEEec--CCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEWFL--GNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
|+.+.|.|.+.+ .|.| .+.|++++..+............. ......+.|.|..+..+|.|.|.|.+.|..+..
T Consensus 131 g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 131 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 207 (438)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC
Confidence 678999999877 6777 899999998876541111111001 112234689999999999999999999987763
No 291
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.12 E-value=9.9e-11 Score=58.03 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=46.8
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
|..+.|.|.+.|. |. +.+.|+++|..+............++.....+.|.+......|.|.|.|.+.|....
T Consensus 124 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 124 KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 5569999999885 44 389999999877632211111111122234456777766667789999999987543
No 292
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.12 E-value=1e-10 Score=58.59 Aligned_cols=65 Identities=14% Similarity=-0.014 Sum_probs=46.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEE--EEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKS--KMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.++|.|.+.+ +.+.+.|++++..+...... . ....... .|.|.+++.+|+|.|.|.+.|..+
T Consensus 22 ~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~-----~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 88 (218)
T 1uct_A 22 LDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-R-----LKFWNETDPEFVIDHMDANKAGRYQCQYRIGHY 88 (218)
T ss_dssp TTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-E-----CC----CCCEEEECSCCGGGCEEEEEEEEETTT
T ss_pred CCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-c-----CCCCcceeeEEEEcccccccCEEEEEEEEcCCC
Confidence 5899999999876 67899999987544321110 0 0001123 799999999999999999998754
No 293
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.12 E-value=4.4e-10 Score=51.82 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=48.7
Q ss_pred CCCceEEEEeEeCccCC---CeEEEEeCCEEeccc------------------ceEEEEEEecCCCeEEEEEEEccCCCC
Q psy11826 1 MLGRKITFFCMAEGFPR---PHITWTKDDIELTFH------------------KYFQVHEWFLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~~---~~~~w~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~i~~~~~~ 59 (83)
.+|+.+.|.|...+.+. ..+.|++........ .+.... .........+|.|.+++.+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~--~~~~~~~~~sL~I~~v~~~ 90 (123)
T 4gjt_B 13 VLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQP--PPPRNPLDGSVLLRNAVQA 90 (123)
T ss_dssp CTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECC--CSSCCTTBCCEEEESCCSS
T ss_pred EcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEe--cCCCcCCEEEEEECCCChH
Confidence 36999999999876544 357899853211100 000000 0001112346999999999
Q ss_pred CCeEEEEEeeC-CCcceeeEEEEe
Q psy11826 60 DAGYYECVADN-PFAIDRRGFRTD 82 (83)
Q Consensus 60 ~~g~y~C~~~~-~~g~~~~~~~~~ 82 (83)
|+|.|.|.+.+ ..|.......|.
T Consensus 91 DsG~Y~C~v~t~~~g~~~~~~~L~ 114 (123)
T 4gjt_B 91 DEGEYECRVSTFPAGSFQARLRLR 114 (123)
T ss_dssp SCSEEEEEEEESSSCEEEEEEEEE
T ss_pred HCEEEEEEEEECCCCeEEeEEEEE
Confidence 99999998764 566666665554
No 294
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.12 E-value=1.1e-09 Score=51.21 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=45.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEE---ec-ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIE---LT-FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~---~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+. +.+.|+++ +.. +. ...++.+.. .. ....|.|.+++.+|+|.|.|.+.|..|
T Consensus 31 ~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~--~~---~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 31 RSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQ--NG---SVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp TTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEE--ET---TEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred CCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEc--CC---CEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 68999999998876 88999985 321 11 122333221 11 135799999999999999999998764
No 295
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.12 E-value=1.8e-09 Score=48.64 Aligned_cols=65 Identities=18% Similarity=0.377 Sum_probs=45.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|...+.+.+.+.|++.. . .+.. ..++.. ........|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~-----~~~~~~~~L~I~~v~~~DsG~Y~C~ 89 (108)
T 1qfw_M 15 VGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTG-----SGSATDFTLTISSVQAEDFADYHCG 89 (108)
T ss_dssp TTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEEC-----CBCSSEEEEEESSCCTTCCSEEEEE
T ss_pred CCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEE-----EcCCCEEEEEECCCChhhCEEEEEE
Confidence 6899999999988777889999743 1 1110 011111 1112245799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 90 ~~~~ 93 (108)
T 1qfw_M 90 QTYN 93 (108)
T ss_dssp ECSS
T ss_pred EccC
Confidence 9875
No 296
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.12 E-value=2.9e-10 Score=51.06 Aligned_cols=78 Identities=15% Similarity=0.139 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCC---CeEEEEeCCEEe-------c--ccceEEE-----EEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFPR---PHITWTKDDIEL-------T--FHKYFQV-----HEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~---~~~~w~~~~~~~-------~--~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
.|+.+.|.|...+.+. ..+.|++..... . ....... ............+|.|.+++.+|+|.|
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y 87 (109)
T 2oyp_A 8 VGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDHGTY 87 (109)
T ss_dssp TTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGCEEE
T ss_pred cCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhCeEE
Confidence 6899999999766543 348999854211 0 0000000 000000011134799999999999999
Q ss_pred EEEeeCCCcceeeEE
Q psy11826 65 ECVADNPFAIDRRGF 79 (83)
Q Consensus 65 ~C~~~~~~g~~~~~~ 79 (83)
.|.+.+..+......
T Consensus 88 ~C~v~~~~~~~~~~~ 102 (109)
T 2oyp_A 88 CCRIQFPGLMNDKKL 102 (109)
T ss_dssp EEEECCSSTTCCEEE
T ss_pred EEEEEcCCcccceEE
Confidence 999998765544333
No 297
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.12 E-value=1.3e-10 Score=57.80 Aligned_cols=63 Identities=11% Similarity=0.056 Sum_probs=43.0
Q ss_pred CC--ceEEEEeEeCccCCCeEEEEeC---CEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LG--RKITFFCMAEGFPRPHITWTKD---DIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g--~~~~~~C~~~~~~~~~~~w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
+| +.+.|.|.+.+ |.+.+.|++. +..+......... . ...|.|..++.+|+|.|.|.+.|..+
T Consensus 21 eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~----~----~~~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 21 ENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWD----S----KKGFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp CSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEE----T----TTEEEEEGGGTTTCSEEEEEEC----
T ss_pred cCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCccccc----C----CccEEEccCChhcCceEEEEEEECCe
Confidence 47 99999999876 7789999874 5544433221111 1 12589999999999999999987544
No 298
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.11 E-value=5.8e-11 Score=58.42 Aligned_cols=72 Identities=17% Similarity=0.373 Sum_probs=47.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccce--EEEEEEecCC-CeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKY--FQVHEWFLGN-NTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.|.+.+.|++++..+..... .......... ......|.|.+++.+|.|.|.|.+.+..|
T Consensus 18 ~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 92 (209)
T 1nbq_A 18 ENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGG 92 (209)
T ss_dssp TTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTS
T ss_pred cCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCC
Confidence 588999999998889999999986643211000 0000000000 00114799999999999999999998755
No 299
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.11 E-value=1.2e-09 Score=54.13 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=46.6
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCC--EEe---cc--c-----------ceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDD--IEL---TF--H-----------KYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~--~~~---~~--~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+. |.+.+.|++.. ... .. . .++.... .....+|.|.+++.+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 14 LGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-----SGADRYLSISNIQPEDEA 88 (218)
T ss_dssp TTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-----ETTEEEEEESSCCGGGCE
T ss_pred CCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-----CCceEEEEEccCCcccCE
Confidence 58999999999988 89999999822 110 00 0 1111111 111357999999999999
Q ss_pred EEEEEeeCCCc
Q psy11826 63 YYECVADNPFA 73 (83)
Q Consensus 63 ~y~C~~~~~~g 73 (83)
.|.|.+.+..|
T Consensus 89 ~Y~C~~~~~~~ 99 (218)
T 3s96_B 89 IYICGVGDTIK 99 (218)
T ss_dssp EEEEEEEEEET
T ss_pred EEEEEEecCCC
Confidence 99999988765
No 300
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.11 E-value=1.5e-09 Score=53.76 Aligned_cols=67 Identities=19% Similarity=0.312 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEe---c---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IEL---T---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|++.. ... . ...++.... ......|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3r06_A 15 LGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG-----SGRDSSFTISSLESEDIGSYYCQ 89 (213)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec-----cCCEEEEEECCCCcccCEEEEEe
Confidence 6899999999999999999998732 110 0 011222110 11235799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 90 ~~~~~~ 95 (213)
T 3r06_A 90 QYYNYP 95 (213)
T ss_dssp ECSSSS
T ss_pred cccCCc
Confidence 988653
No 301
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.11 E-value=1.5e-09 Score=56.75 Aligned_cols=75 Identities=13% Similarity=0.206 Sum_probs=50.7
Q ss_pred ceEEEEeE-eCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 4 RKITFFCM-AEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 4 ~~~~~~C~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
+.+.+.|. ..+.|.|.+.|++++....... ............+.|.|..+...|.|.|.|.+.|..+.....+.|
T Consensus 151 ~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l 226 (331)
T 3u83_A 151 KVLVATCTSANGKPPSVVSWETRLKGEAEYQ---EIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTL 226 (331)
T ss_dssp CEEEEEEEEEEEBSCCEEEEEESSCCEEEEE---EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEEC
T ss_pred ceEEEEEEecCCcCCceEEEEcCCCCccccc---eeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEE
Confidence 67999997 7889999999998532111100 001011122334679999999999999999999988776555443
No 302
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.11 E-value=3e-10 Score=55.85 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEEecc----cce---EEEEEE-ecCCC--eEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIELTF----HKY---FQVHEW-FLGNN--TIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~~~~----~~~---~~~~~~-~~~~~--~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|...+ .+.+.+.|++++..+.. ... ...... ..... ....+|.|.+++.+|+|.|.|.+.+
T Consensus 12 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 91 (193)
T 2if7_A 12 LGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQIST 91 (193)
T ss_dssp TTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEEEEEEC
T ss_pred ecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEEEEEEe
Confidence 6899999999765 45578999998754321 000 000000 00000 0124699999999999999999999
Q ss_pred CCcceeeEEEE
Q psy11826 71 PFAIDRRGFRT 81 (83)
Q Consensus 71 ~~g~~~~~~~~ 81 (83)
..+.....+.|
T Consensus 92 ~~~~~~~~~~L 102 (193)
T 2if7_A 92 KTSAKLSSYTL 102 (193)
T ss_dssp SSCEEEEEEEE
T ss_pred cCCCeEEEEEE
Confidence 87765444433
No 303
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.11 E-value=3.7e-10 Score=58.84 Aligned_cols=80 Identities=18% Similarity=0.260 Sum_probs=49.2
Q ss_pred CCceEEEEeEeCccCCC-----eEEEEeCCEEecc-------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRP-----HITWTKDDIELTF-------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-----~~~w~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.|.+.+.+.+ .+.|++++..... ..+...............+|.|.+++.+|+|.
T Consensus 14 ~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 93 (313)
T 4fqp_A 14 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGN 93 (313)
T ss_dssp TTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEE
T ss_pred cCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEE
Confidence 69999999998776655 4899997753221 11111110000111123469999999999999
Q ss_pred EEEEee-CCCcceeeEEEE
Q psy11826 64 YECVAD-NPFAIDRRGFRT 81 (83)
Q Consensus 64 y~C~~~-~~~g~~~~~~~~ 81 (83)
|.|.+. +..+.......|
T Consensus 94 Y~C~v~~~~~~~~~~~~~l 112 (313)
T 4fqp_A 94 YTCLFVTFPQGSRSVDIWL 112 (313)
T ss_dssp EEEEEECSSSCEEEEEEEE
T ss_pred EEEEEeeccCcceeeeeee
Confidence 999875 444554444443
No 304
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.11 E-value=1.6e-10 Score=56.93 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=50.4
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCC----------------EEecc-----cceEEEEEEecCCCeEEEEEEEccC
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDD----------------IELTF-----HKYFQVHEWFLGNNTIKSKMEIDPA 56 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~----------------~~~~~-----~~~~~~~~~~~~~~~~~~~l~i~~~ 56 (83)
+|+.+.|.|.+.+.+ .+.+.|++.+ ..... ..+..... ........+|.|.++
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~~L~i~~v 91 (214)
T 3jz7_A 14 KGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTS--NDVKSGDASINVTNL 91 (214)
T ss_dssp TTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESC--SCGGGTBCCEEECSC
T ss_pred cCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEec--cCccCCcccEEEccC
Confidence 589999999988776 4689998732 22211 01111100 000011346999999
Q ss_pred CCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 57 TQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 57 ~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
+.+|.|.|.|.+.+..+.....+.|
T Consensus 92 ~~~D~G~Y~C~~~~~~~~~~~~~~l 116 (214)
T 3jz7_A 92 QLSDIGTYQCKVKKAPGVANKKFLL 116 (214)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ChhhCeEEEEEEEeCCCccccEEEE
Confidence 9999999999999988766555544
No 305
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.11 E-value=3.8e-09 Score=47.69 Aligned_cols=65 Identities=17% Similarity=0.320 Sum_probs=45.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E--E-ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I--E-LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~--~-~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|.+.+.+.+.+.|++.. . . +.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 17 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 91 (109)
T 2q20_A 17 VGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG-----SGTDFTFTISSLQPEDIATYYCQ 91 (109)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-----cCCEEEEEECCCChhhCEEEEEE
Confidence 6899999999988878899999743 1 1 110 11111110 01135799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 92 ~~~~ 95 (109)
T 2q20_A 92 QYDN 95 (109)
T ss_dssp ECSS
T ss_pred EeeC
Confidence 9874
No 306
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.10 E-value=1.5e-09 Score=60.53 Aligned_cols=77 Identities=12% Similarity=0.051 Sum_probs=51.5
Q ss_pred CCceEEEEeEeCccCCC---eEEEEeCCEEec-----cc---------ceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFPRP---HITWTKDDIELT-----FH---------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~---~~~w~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
.|+.+.|.|.+.+.+.+ .+.|++++.... .. .+..+. .........|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~---~~~~~g~~~L~I~~v~~~D~G~Y 90 (585)
T 2ocw_A 14 EGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLT---NFPENGTFVVNIAQLSQDDSGRY 90 (585)
T ss_pred cCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEE---ecCCCCEEEEEECCCCcccCEEE
Confidence 68999999998887654 789999875321 10 111111 00012235799999999999999
Q ss_pred EEEeeCCCcceeeEEEE
Q psy11826 65 ECVADNPFAIDRRGFRT 81 (83)
Q Consensus 65 ~C~~~~~~g~~~~~~~~ 81 (83)
.|.+.+..+.....+.|
T Consensus 91 ~C~~~n~~~~~~~~~~l 107 (585)
T 2ocw_A 91 KCGLGINSRGLSFDVSL 107 (585)
T ss_pred EEEcccCCCCceEEEEE
Confidence 99998877765544443
No 307
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=2.3e-10 Score=55.95 Aligned_cols=61 Identities=18% Similarity=0.457 Sum_probs=44.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.+.+ +.+.+.|++++..+.... . . ......|.|..++.+|+|.|.|.+.|..
T Consensus 112 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~--~----~---~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 112 SGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQR--G----Y---GKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp TTCEEEEEEECSS-SCSEEEEEEESSSCEEEE--E----E---CSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred cCCEEEEEEEcCC-CCCEEEEEECCccccccc--c----C---CCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 5889999999765 456899999886544210 0 0 0113579999999999999999998754
No 308
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.10 E-value=2.1e-11 Score=61.19 Aligned_cols=72 Identities=13% Similarity=0.214 Sum_probs=43.5
Q ss_pred CceEEEEeEeCccC-CC-eEEEEeCCEEecccceEEEEEE--ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGFP-RP-HITWTKDDIELTFHKYFQVHEW--FLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~~-~~-~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
|+.+.+.|.+.+.+ .+ .+.|++++..+........... .+......+.|.|.....+|.|.|.|.+.|....
T Consensus 149 g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 149 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 78899999998854 43 6999999887654311100000 0111234567899998889999999999986544
No 309
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.10 E-value=5.1e-10 Score=57.08 Aligned_cols=66 Identities=15% Similarity=0.230 Sum_probs=47.2
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++ ++..+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 153 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 227 (257)
T 1f3r_B 153 VGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG-----SGTDYTLTISSLQPEDVATYFCY 227 (257)
T ss_dssp TTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----EBTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEec-----CCCEEEEEECCCChhhCEEEEEE
Confidence 58899999999998888999998 4433210 11121110 01135799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.|..
T Consensus 228 a~n~~ 232 (257)
T 1f3r_B 228 QYNNG 232 (257)
T ss_dssp EESSS
T ss_pred EeCCC
Confidence 99864
No 310
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.10 E-value=1.3e-09 Score=55.56 Aligned_cols=69 Identities=13% Similarity=0.327 Sum_probs=46.4
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc----------------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.+.|.|.+.+.| .+.+.|++. +..+.. ..++.+... ......+|.|.+++.+|+
T Consensus 14 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 14 PSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRD---TSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp TTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEE---TTTTEEEEEEESCCTTCC
T ss_pred CCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEE---CCCCEEEEEECCCCcccC
Confidence 689999999998875 688999974 211100 111221110 011235799999999999
Q ss_pred eEEEEEeeCCCc
Q psy11826 62 GYYECVADNPFA 73 (83)
Q Consensus 62 g~y~C~~~~~~g 73 (83)
|.|.|.+.+..|
T Consensus 91 G~Y~C~a~n~~g 102 (257)
T 1f3r_B 91 GTYYCTRDLYGG 102 (257)
T ss_dssp EEEEEEEESSSS
T ss_pred EEEEEEEccccc
Confidence 999999998753
No 311
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.09 E-value=2.6e-10 Score=56.08 Aligned_cols=64 Identities=14% Similarity=0.211 Sum_probs=46.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.+.+.|. .+.|++++..+........ .......|.|.+++.+|+|.|.|.+.|..
T Consensus 18 ~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 18 QGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQ------ELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp TTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCH------HHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEEEEecCCCc-EEEEEECCccccccccccc------cCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 5899999999888765 6999999876632110000 00002369999999999999999998876
No 312
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.09 E-value=3.1e-09 Score=48.18 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=48.5
Q ss_pred CCceEEEEeEeCccCC-CeEEEEeCCE-----Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCMAEGFPR-PHITWTKDDI-----ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~~~~w~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
+|+.+.|.|...+... ..+.|++... .+.. ..++.... ........|.|.+++.+|+|.|.|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~---~~~~~~~sL~I~~~~~~DsG~Y~C 91 (113)
T 1zox_A 15 EQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRD---NQRDFIFTVTMEDLRMSDAGIYWC 91 (113)
T ss_dssp TTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEE---ETTTTEEEEEECSCCGGGCEEEEE
T ss_pred CCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEE---CCcCCEEEEEEccCCHHHCEEEEE
Confidence 5899999999876443 3599998542 1110 01111111 111224579999999999999999
Q ss_pred EeeCCCcceeeEEEE
Q psy11826 67 VADNPFAIDRRGFRT 81 (83)
Q Consensus 67 ~~~~~~g~~~~~~~~ 81 (83)
.+.+........+.|
T Consensus 92 ~v~~~~~~~~~~v~L 106 (113)
T 1zox_A 92 GITKGGLDPMFKVTV 106 (113)
T ss_dssp EECCSSSCCEEEEEE
T ss_pred eeEcCCCCccEEEEE
Confidence 998875444444444
No 313
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.09 E-value=1.2e-10 Score=58.44 Aligned_cols=73 Identities=15% Similarity=0.362 Sum_probs=48.7
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ..+......+.|.|..+...| |.|.|.+.|..+...
T Consensus 142 ~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 142 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVL-QSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEE-CTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCcee-CCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 57889999999886 766 89999988653211000000 011122345679999888888 999999999776543
No 314
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.08 E-value=4.4e-10 Score=56.44 Aligned_cols=75 Identities=20% Similarity=0.414 Sum_probs=50.0
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ........+.|.|..+...+ |.|.|.+.|..+......
T Consensus 144 ~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 144 TGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEE--ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCcee--CCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 57889999999886 777 89999987643211111111 11112234578888888755 999999999888765443
No 315
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=1.3e-09 Score=53.26 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=46.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.++|.|.+.+ +.+.+.|++++..+..... ..........|.|.+++.+|+|.|.|.+.+..+
T Consensus 17 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~------~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 17 KEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP------KPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTEEEEEECC------SSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCCEEEEEecCC-CCCEEEEEECCCccccccc------ccCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 5899999999765 3468899999876542100 000111245799999999999999999987543
No 316
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.08 E-value=2.1e-10 Score=56.76 Aligned_cols=74 Identities=14% Similarity=0.150 Sum_probs=47.5
Q ss_pred CCceEEEEeEeCccCCCe---EEEEeCCEEeccc----------------ceEEEEEE--ecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFPRPH---ITWTKDDIELTFH----------------KYFQVHEW--FLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~---~~w~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+.+.+. +.|++++..+... ........ .........+|.|.+++.+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 94 (225)
T 4fmk_A 15 LGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRVED 94 (225)
T ss_dssp TTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCGGG
T ss_pred cCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCHHH
Confidence 699999999998877664 7899876432110 00000000 00011123469999999999
Q ss_pred CeEEEEEeeCCCcce
Q psy11826 61 AGYYECVADNPFAID 75 (83)
Q Consensus 61 ~g~y~C~~~~~~g~~ 75 (83)
+|.|.|.+.+..+..
T Consensus 95 ~G~Y~C~~~~~~~~~ 109 (225)
T 4fmk_A 95 EGNYTCEFATFPNGT 109 (225)
T ss_dssp CEEEEEEEEEETTEE
T ss_pred CcceEEEEEeCCCcc
Confidence 999999998866543
No 317
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.08 E-value=1.4e-09 Score=53.76 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=45.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+. +.+.+.|++. +.... ...++.... .....+|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 14 PGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-----SGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp TTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEEESCCGGGCEEEEEE
T ss_pred CCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-----cCCEEEEEECCCChhHCEEEEEE
Confidence 689999999987 8889999983 22111 111222111 11135799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 87 ~~~~~~ 92 (211)
T 3tv3_L 87 SLVGNW 92 (211)
T ss_dssp EEETTT
T ss_pred EecCCC
Confidence 998766
No 318
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.08 E-value=3.7e-10 Score=52.22 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=49.1
Q ss_pred CCceEEEEeEeCccCCC----eEEEEeCCE----------------Eecc----cceEEEEEEecCC------CeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRP----HITWTKDDI----------------ELTF----HKYFQVHEWFLGN------NTIKSKM 51 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~----~~~w~~~~~----------------~~~~----~~~~~~~~~~~~~------~~~~~~l 51 (83)
+|+.+.|.|.....+.+ .+.|++... .... ..+.......... .....+|
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~sL 95 (128)
T 3r0n_A 16 LGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATL 95 (128)
T ss_dssp TTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBCCE
T ss_pred cCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCeEE
Confidence 68999999998776655 789998521 1111 0111110000000 0113479
Q ss_pred EEccCCCCCCeEEEEEeeC-CCcceeeEEEEe
Q psy11826 52 EIDPATQKDAGYYECVADN-PFAIDRRGFRTD 82 (83)
Q Consensus 52 ~i~~~~~~~~g~y~C~~~~-~~g~~~~~~~~~ 82 (83)
.|.+++.+|+|.|.|.+.. ..|.......|.
T Consensus 96 ~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~ 127 (128)
T 3r0n_A 96 ALHGLTVEDEGNYTCEFATFPKGSVRGMTWLR 127 (128)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEccCCchhCeEEEEEEEeCCCCCcccEEEEE
Confidence 9999999999999998754 557666666554
No 319
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.08 E-value=3.6e-09 Score=49.17 Aligned_cols=69 Identities=16% Similarity=0.248 Sum_probs=45.9
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeC--CEEe----cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKD--DIEL----TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|...+. +.+.+.|++. +... ....++..... .......|.|.+++.+|+|.|.|.+.+..+
T Consensus 14 ~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~---~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~ 90 (126)
T 3moq_A 14 TGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVN---KGSKSFSLRISDLRVEDSGTYKCQAFYVFF 90 (126)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEEEEEEEE
T ss_pred CCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEe---CCCCEEEEEECcCChHhCEEEEEEEEEcCC
Confidence 58999999998664 5678999973 3221 11222222211 111246799999999999999999987543
No 320
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.08 E-value=9.6e-10 Score=54.47 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=46.7
Q ss_pred CCceEEEEeEeCccCC---CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPR---PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.++ +.+.|++++..+........ ..........+.|.|......|.|.|.|.+.|..+.
T Consensus 105 ~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~-~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 105 AGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLED-ADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179 (202)
T ss_dssp TTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSC-CSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCC
T ss_pred CCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccc-cCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccC
Confidence 5889999999987543 36899999986643210000 000000122345678877777889999999998765
No 321
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.08 E-value=4.3e-11 Score=64.61 Aligned_cols=77 Identities=18% Similarity=0.377 Sum_probs=54.0
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ..+.....+.|.|..+..+| |.|.|.+.|..|......
T Consensus 357 ~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~ 433 (438)
T 1qgc_4 357 AASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 433 (438)
T ss_dssp CSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEE--ETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEE
T ss_pred cCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccc--cCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceee
Confidence 58899999999887 887 89999988765432110110 01122334578998888888 999999999998865554
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.+
T Consensus 434 ~i 435 (438)
T 1qgc_4 434 KI 435 (438)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 322
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.07 E-value=6.3e-09 Score=54.33 Aligned_cols=68 Identities=18% Similarity=0.310 Sum_probs=48.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+. .+.+.+.|++++..+........ .........|.|..++.+|+|.|.|.+.|..+.
T Consensus 132 ~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~----~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 132 SGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQ----IHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp TTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECE----EETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred CCCeEEEEEcCC-CCCcEEEEEECCCccccceeeee----ecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 588999999984 55678899998876643221110 011223457999999999999999999988763
No 323
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.07 E-value=3.8e-09 Score=52.09 Aligned_cols=63 Identities=17% Similarity=0.276 Sum_probs=44.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.++|.|.+.+ +.+.+.|++++..+........ .........|.|.+++ |+|.|.|.+.+.
T Consensus 121 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~----~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 121 AGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGP----KVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp TTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEE----EETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CCCeEEEEEeCCC-CCceEEEEECCcccCccccccc----ccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 6899999999876 5678999999876543211000 0111124578999998 999999999754
No 324
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.07 E-value=1.7e-10 Score=57.26 Aligned_cols=55 Identities=24% Similarity=0.439 Sum_probs=43.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+ |.+.+.|++++..+..... . ...|.|..++.+|+|.|.|.+.+.
T Consensus 17 ~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~~--------~----~~~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 17 EDGSVLLTCDA---EAKNITWFKDGKMIGFLTE--------D----KKKWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp SSSEEEEEECS---CSSEEEEEETTEEEEEEES--------S----CCCEEEEEGGGCCEEEEEEESSSS
T ss_pred CCCeEEEEEcC---CCCEEEEEECCEECCCCCC--------C----CCeEEeCCCCcCCCEEEEEEecCC
Confidence 58899999997 7889999999987653210 0 236889999999999999997653
No 325
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.07 E-value=1.1e-09 Score=62.83 Aligned_cols=68 Identities=21% Similarity=0.329 Sum_probs=51.8
Q ss_pred CCceEEEEeEeCccCCCeEE-EE--eCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRPHIT-WT--KDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~-w~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.|.|.|.+. |. +++..+..... .........+.|.|..+...|.|.|.|.+.|..|.
T Consensus 178 ~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~-----~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~ 248 (731)
T 2v5y_A 178 AGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEI-----KVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGV 248 (731)
T ss_dssp TTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEE-----EECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEE
T ss_pred CCCcEEEEEEeCCCCCCceeEEEecCCCccccccce-----EEeccccceEEEEEcccccccCeEEEEEEECCCCC
Confidence 58889999999999999887 77 56655543211 11222334568999999999999999999999986
No 326
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.07 E-value=3.4e-10 Score=59.34 Aligned_cols=72 Identities=15% Similarity=0.340 Sum_probs=48.0
Q ss_pred CCceEEEEeEeCcc-CCC---eEEEEeCC-EEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF-PRP---HITWTKDD-IELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~---~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+. |.| .+.|++++ ..+........ ..........+.|.|..+..+|.|.|.|.+.|..+.
T Consensus 127 ~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~-~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 203 (323)
T 2wqr_A 127 IRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEE-KQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLP 203 (323)
T ss_dssp TSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEE-ECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred cCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCc-cCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCC
Confidence 58889999998886 456 89999965 33322111110 000111223567999999999999999999987643
No 327
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.07 E-value=1.4e-09 Score=53.70 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=45.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.++|.|.+. .+.+.+.|++++..+....... . .........|.|.+++.+|+|.|.|.+.+.
T Consensus 21 ~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~--~--~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 21 SEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIG--E--HHDGVSKANFSISRMTQDLAGTYRCYGSVT 85 (201)
T ss_dssp TTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEEC--E--EETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred CCCcEEEEEecc-CCCCEEEEEECCCcCCcceeee--e--cCCCCceEEEEeccCCcccCeEEEEeEecC
Confidence 589999999986 4778999999886543211000 0 011122457999999999999999999653
No 328
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.07 E-value=2.9e-09 Score=53.36 Aligned_cols=67 Identities=15% Similarity=0.256 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEe---c---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IEL---T---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++.. ... . ...++.... .....+|.|.+++.+|+|.|.|.
T Consensus 38 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 112 (237)
T 3sob_L 38 VGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-----SGTDFTLTISSLQPEDFATYYCQ 112 (237)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc-----CCCEEEEEECCCChhhCeEEEEe
Confidence 5899999999998888999998832 110 0 011222110 11245799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 113 ~~~~~~ 118 (237)
T 3sob_L 113 QSYTTP 118 (237)
T ss_dssp ECSSSS
T ss_pred eccCCc
Confidence 987654
No 329
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.07 E-value=1.8e-09 Score=53.47 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCCceEEEEeEeCccC---CCeEEEEeCC--EEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 1 MLGRKITFFCMAEGFP---RPHITWTKDD--IELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~---~~~~~w~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
..|+.+.|.|.+.+.| .+.+.|++++ ..+. ...++.... ......|.|.+++.+|+|.
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 13 SPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-----IGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp CTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEE
T ss_pred cCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-----eCCEEEEEECCCCccCCEE
Confidence 3689999999998877 4789999742 2210 011121111 0113479999999999999
Q ss_pred EEEEeeCCCc
Q psy11826 64 YECVADNPFA 73 (83)
Q Consensus 64 y~C~~~~~~g 73 (83)
|.|.+.+..+
T Consensus 88 Y~C~~~~~~~ 97 (212)
T 1q0x_L 88 YFCALWSNNK 97 (212)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEecCch
Confidence 9999998765
No 330
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.07 E-value=2.4e-09 Score=48.20 Aligned_cols=65 Identities=20% Similarity=0.331 Sum_probs=45.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|...+.+.+.+.|++.. .. +.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 89 (107)
T 1i8k_A 15 TGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG-----TGTDFVFTIENTLSEDVGDYYCL 89 (107)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc-----cCCEEEEEECCCCHHHCEEEEEE
Confidence 6899999999988878899999742 11 110 11122110 11134799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 90 ~~~~ 93 (107)
T 1i8k_A 90 QSFN 93 (107)
T ss_dssp ECSS
T ss_pred EeeC
Confidence 9875
No 331
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.06 E-value=1.5e-10 Score=56.70 Aligned_cols=66 Identities=15% Similarity=0.253 Sum_probs=46.3
Q ss_pred CCceEEEEeEeC--ccCCCeEEEEe--CCEEecc----------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAE--GFPRPHITWTK--DDIELTF----------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~--~~~~~~~~w~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|... +.+.+.+.|++ ++..+.. ..+..+. . ..+|.|.+++.+|+|.|.|.
T Consensus 13 ~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~----~----ngsL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 13 LGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF----K----NGTLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp TTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC----T----TSCEEECSCCGGGCEEEEEE
T ss_pred cCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC----C----CCCEEECCCChhhCEEEEEE
Confidence 588899999532 24567899999 7765521 1111111 1 12699999999999999999
Q ss_pred eeCCCcce
Q psy11826 68 ADNPFAID 75 (83)
Q Consensus 68 ~~~~~g~~ 75 (83)
+.|..|..
T Consensus 85 ~~n~~g~~ 92 (182)
T 1hnf_A 85 IYDTKGKN 92 (182)
T ss_dssp EEETTSCE
T ss_pred EEeCCCce
Confidence 99887754
No 332
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.06 E-value=1.2e-09 Score=55.37 Aligned_cols=66 Identities=15% Similarity=0.335 Sum_probs=45.1
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEeccc-----------------ceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTFH-----------------KYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|+++ +..+... .++.+... ......+|.|.+++.+|
T Consensus 145 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 221 (250)
T 3esu_F 145 PGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTAD---KSSSTAYMQLSSLTSVD 221 (250)
T ss_dssp TTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEec---CCCCeEEEEECCCCccc
Confidence 588999999998876 789999986 3222110 11111110 11123469999999999
Q ss_pred CeEEEEEeeC
Q psy11826 61 AGYYECVADN 70 (83)
Q Consensus 61 ~g~y~C~~~~ 70 (83)
+|.|.|.+.+
T Consensus 222 sG~Y~C~~~~ 231 (250)
T 3esu_F 222 SAVYFCARSG 231 (250)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999986
No 333
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.06 E-value=1.9e-09 Score=56.95 Aligned_cols=70 Identities=20% Similarity=0.369 Sum_probs=46.4
Q ss_pred CCCceEEEEeEeCcc--CCCeEEEEeC--CEEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCC
Q psy11826 1 MLGRKITFFCMAEGF--PRPHITWTKD--DIELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~--~~~~~~w~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 59 (83)
..|+.+.|.|.+.+. +.+.+.|+++ +..+. ...++.+... .......|.|.+++.+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~ 89 (344)
T 1za6_B 13 KPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTAD---TSASTAYVELSSLRSE 89 (344)
T ss_dssp CTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEE---TTTTEEEEEECSCCGG
T ss_pred eCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEe---cCCCEEEEEECCCCcc
Confidence 368999999998876 3678999985 32211 0111221110 1112357999999999
Q ss_pred CCeEEEEEeeCCCc
Q psy11826 60 DAGYYECVADNPFA 73 (83)
Q Consensus 60 ~~g~y~C~~~~~~g 73 (83)
|+|.|.|.+.+..+
T Consensus 90 D~G~Y~C~~~n~~~ 103 (344)
T 1za6_B 90 DTAVYFCTRSLNMA 103 (344)
T ss_dssp GCEEEEEEETTTTC
T ss_pred cCEEEEEEEecCcc
Confidence 99999999988543
No 334
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.06 E-value=2.4e-09 Score=49.24 Aligned_cols=65 Identities=18% Similarity=0.347 Sum_probs=45.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++.. .. +.. ..++.... .....+|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 89 (120)
T 1mqk_L 15 VGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG-----SGTQFSLKINSLLPEDFGSYYCQ 89 (120)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec-----cCCEEEEEECCCCHHHCEEEEEE
Confidence 6899999999988878899999842 21 110 11222110 01135799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 90 ~~~~ 93 (120)
T 1mqk_L 90 HHYG 93 (120)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 9875
No 335
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.06 E-value=3.2e-10 Score=56.57 Aligned_cols=75 Identities=15% Similarity=0.296 Sum_probs=49.7
Q ss_pred CCceEEEEeEeCc-cCC-C-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEG-FPR-P-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~-~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+ .|. + .+.|++++..+...................+.|.|......|.|.|.|.+.+..+...
T Consensus 137 ~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 137 PDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp CTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 5788999999988 665 3 8999998865532110000000111223345799999999999999999998876543
No 336
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.06 E-value=4.4e-09 Score=47.84 Aligned_cols=66 Identities=15% Similarity=0.225 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEe----cccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIEL----TFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|...+.+ .+.+.|++. +... ....++..... .......|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 14 TGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVN---SGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp TTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred cCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEe---CCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 689999999987655 568999974 2211 11122322111 112245799999999999999999987
No 337
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.06 E-value=2.9e-09 Score=54.02 Aligned_cols=67 Identities=16% Similarity=0.320 Sum_probs=46.3
Q ss_pred CCceEEEEeEeCccC-----CCeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFP-----RPHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-----~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+.+ .+.+.|+++ +..+. ...++.... ......|.|.+++.+|.|
T Consensus 52 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G 126 (254)
T 2c1o_A 52 IGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG-----SGTDFTLKISRVEAEDLG 126 (254)
T ss_dssp TTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCS
T ss_pred CCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec-----CCCEEEEEECcCCcccCE
Confidence 689999999998887 488999973 22110 011222111 011347999999999999
Q ss_pred EEEEEeeCCCc
Q psy11826 63 YYECVADNPFA 73 (83)
Q Consensus 63 ~y~C~~~~~~g 73 (83)
.|.|.+.+..+
T Consensus 127 ~Y~C~a~n~~~ 137 (254)
T 2c1o_A 127 IYYCVQGSHFP 137 (254)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEEcCcc
Confidence 99999998754
No 338
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.06 E-value=9.6e-10 Score=54.87 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=49.1
Q ss_pred CCceEEEEeEeCccCC-CeEEEEeCCEE-----ecc----cceEEEEEEe----------cCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFPR-PHITWTKDDIE-----LTF----HKYFQVHEWF----------LGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~~~~w~~~~~~-----~~~----~~~~~~~~~~----------~~~~~~~~~l~i~~~~~~~~ 61 (83)
.|+.+.|.|.+.+.+. +.+.|++++.. +.. ...... ... ... ...|.|.+++.+|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~ 89 (231)
T 2pet_A 14 RGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQV-TMHDTRGRSPPYQLDS---QGRLVLAEAQVGDE 89 (231)
T ss_dssp TTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEE-EECCCSCCSSCCEECT---TCCEEESSCCGGGC
T ss_pred cCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCcccc-ccccccccccccccCC---CceEEEcccCcccC
Confidence 5889999999988885 88999975432 110 000100 000 011 12399999999999
Q ss_pred eEEEEEeeCCC-cceeeEEEE
Q psy11826 62 GYYECVADNPF-AIDRRGFRT 81 (83)
Q Consensus 62 g~y~C~~~~~~-g~~~~~~~~ 81 (83)
|.|.|.+.+.. +.....+.|
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~l 110 (231)
T 2pet_A 90 RDYVCVVRAGAAGTAEATARL 110 (231)
T ss_dssp EEEEEEEECGGGCEEEEEEEE
T ss_pred ceEEEEEEecCCCceEEEEEE
Confidence 99999999876 555444433
No 339
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.05 E-value=2e-09 Score=54.92 Aligned_cols=69 Identities=12% Similarity=0.138 Sum_probs=46.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEe---cc----------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IEL---TF----------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~---~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
+|+.+.|.|.+.+.+.+.+.|++.. ... .. ..++.... .......+|.|.+++.+|+|.|.|
T Consensus 17 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~sL~I~~v~~~DsG~Y~C 93 (256)
T 3tf7_C 17 EGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEF---SKSDSSFHLRKASVHRSDSAVYFC 93 (256)
T ss_dssp TTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEE---ETTTTEEEEEESSCCGGGCSEEEE
T ss_pred CCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEE---cCCCCEEEEEECCCCcccCEEEEE
Confidence 5899999999988899999999732 111 00 01111100 011124579999999999999999
Q ss_pred EeeCCCc
Q psy11826 67 VADNPFA 73 (83)
Q Consensus 67 ~~~~~~g 73 (83)
.+.+..+
T Consensus 94 ~~~~~~~ 100 (256)
T 3tf7_C 94 AVSAKGT 100 (256)
T ss_dssp EEECTTC
T ss_pred EEecCCC
Confidence 9988654
No 340
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.05 E-value=1.6e-09 Score=53.89 Aligned_cols=68 Identities=18% Similarity=0.379 Sum_probs=46.0
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|+++ +..+.. ..++..... ......+|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 14 PGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLE---TSATTAYLQINNLKNED 90 (219)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEe---cCCCEEEEEECCCCccc
Confidence 689999999988765 678999985 322110 011111110 01113579999999999
Q ss_pred CeEEEEEeeCCC
Q psy11826 61 AGYYECVADNPF 72 (83)
Q Consensus 61 ~g~y~C~~~~~~ 72 (83)
+|.|.|.+.+..
T Consensus 91 ~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 91 MATYFCARGTTI 102 (219)
T ss_dssp CEEEEEEEEETT
T ss_pred CEEEEEEEeccC
Confidence 999999998865
No 341
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.04 E-value=4.3e-09 Score=53.51 Aligned_cols=67 Identities=18% Similarity=0.395 Sum_probs=45.5
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|+++ +..+.. ..++.+... .......|.|.+++.+|
T Consensus 148 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 224 (256)
T 3ux9_B 148 PGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD---NSKNTLYLQMNSLRAED 224 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred CCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEec---CCCCEEEEEECCCChhh
Confidence 588999999998766 789999985 321110 012222111 11223469999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 225 sG~Y~C~~~~~ 235 (256)
T 3ux9_B 225 TAVYYCARYID 235 (256)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEcC
Confidence 99999999885
No 342
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.04 E-value=4.7e-10 Score=55.15 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=47.7
Q ss_pred CCceEEEEeEeC----ccCCCeEEEEeCCEEecccceEEEEEE--ecCC----CeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAE----GFPRPHITWTKDDIELTFHKYFQVHEW--FLGN----NTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~----~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+. +.|.+.+.|.+++..+........... .... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 87 (201)
T 1dr9_A 8 VKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKY 87 (201)
T ss_dssp TTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEEEEC
T ss_pred eCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEEEcC
Confidence 689999999974 446789999999876531100000000 0000 001247999999999999999999987
Q ss_pred Ccc
Q psy11826 72 FAI 74 (83)
Q Consensus 72 ~g~ 74 (83)
.|.
T Consensus 88 ~g~ 90 (201)
T 1dr9_A 88 EKD 90 (201)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 343
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.04 E-value=7.1e-10 Score=53.86 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecc--cceEEEEE-------EecCC---CeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTF--HKYFQVHE-------WFLGN---NTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~-------~~~~~---~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
.|+.+.|.|.+.+.|.+.+.|++++..... ........ ..... .....+|.|.+++.+|.|.|.|.+.
T Consensus 9 ~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 88 (184)
T 2ny1_B 9 KGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVE 88 (184)
T ss_dssp TTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEET
T ss_pred CCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEE
Confidence 689999999998889999999998753111 00000000 00000 1113459999999999999999998
Q ss_pred CCCc
Q psy11826 70 NPFA 73 (83)
Q Consensus 70 ~~~g 73 (83)
+..+
T Consensus 89 ~~~~ 92 (184)
T 2ny1_B 89 DQKE 92 (184)
T ss_dssp TEEE
T ss_pred cCCC
Confidence 8755
No 344
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.04 E-value=4.7e-10 Score=50.98 Aligned_cols=73 Identities=15% Similarity=0.271 Sum_probs=44.5
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeCCEE--------eccc-ceEEEE---EEec--CCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKDDIE--------LTFH-KYFQVH---EWFL--GNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~~~~--------~~~~-~~~~~~---~~~~--~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
.|+.+.|.|.... .....+.|++.... +... ...... .... .......+|.|.+++.+|+|.|.|
T Consensus 11 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 90 (116)
T 2or8_A 11 VGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCC 90 (116)
T ss_dssp TTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEE
T ss_pred eCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEEEEE
Confidence 6899999999765 34567999986521 0000 000000 0000 001123469999999999999999
Q ss_pred EeeCCCcc
Q psy11826 67 VADNPFAI 74 (83)
Q Consensus 67 ~~~~~~g~ 74 (83)
.+.+..+.
T Consensus 91 ~v~~~~~~ 98 (116)
T 2or8_A 91 RVEIPGWF 98 (116)
T ss_dssp EECCSSTT
T ss_pred EEEcCCcc
Confidence 99886543
No 345
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.04 E-value=1.3e-09 Score=55.72 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=47.7
Q ss_pred CCceEEEEeEeCc-cCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEc---cCCCCCCeE--EEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEG-FPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEID---PATQKDAGY--YECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~~~g~--y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+ .|.| .+.|++++..+.... .. ... .+.+. .++.+|.|. |.|.+.|..+
T Consensus 17 ~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~----~~---~~~----~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 17 VDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV----TY---GND----SFSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp TTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEE----EE---CSS----EEEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred cCCCEEEEEEccCCCCCcceEEEEEeCCEECCceE----ee---CCC----eEEEEeecccccccCCcceEEEEEecCCC
Confidence 5899999999988 7777 999999998776421 00 111 22222 346778775 9999999888
Q ss_pred ceeeEEEE
Q psy11826 74 IDRRGFRT 81 (83)
Q Consensus 74 ~~~~~~~~ 81 (83)
.......|
T Consensus 86 ~~~~~~~l 93 (265)
T 2oz4_A 86 SQETLQTV 93 (265)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 76555444
No 346
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.04 E-value=7e-09 Score=46.81 Aligned_cols=68 Identities=18% Similarity=0.341 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccC-CCeEEEEeCCEE--ec-----------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTKDDIE--LT-----------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.++|.|...... .+.+.|++.... .. ...++.... ........|.|.+++.+|+|.|.|.
T Consensus 10 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~---~~~~~~~~L~I~~~~~~DsG~Y~C~ 86 (110)
T 2q87_A 10 VGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRD---SPANLSFTVTLENLTEEDAGTYWCG 86 (110)
T ss_dssp TTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEE---EGGGTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEE---cCcCCEEEEEEccCCHHHCEEEEEE
Confidence 689999999976543 468999985321 10 001111111 0111245799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.+..
T Consensus 87 ~~~~~ 91 (110)
T 2q87_A 87 VDTPW 91 (110)
T ss_dssp EECTT
T ss_pred EecCc
Confidence 98874
No 347
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.03 E-value=1.2e-09 Score=50.24 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=45.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|.+.+.+.+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 17 ~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 91 (119)
T 2e27_L 17 LGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG-----SGRDYSFSISNLEPEDAATYYCL 91 (119)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-----cCCEEEEEECCCChHHCEEEEEE
Confidence 5899999999988888899999742 1 1110 11122110 11135799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 92 ~~~~ 95 (119)
T 2e27_L 92 QYDN 95 (119)
T ss_dssp ECGG
T ss_pred EccC
Confidence 9864
No 348
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.03 E-value=2.4e-09 Score=54.25 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE-----Eec---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI-----ELT---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|.+.+.|.+.+.|++... .+. ...++.... .....+|.|.+++.+|+|.|.|.
T Consensus 18 ~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 92 (250)
T 3esu_F 18 LGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG-----SGTDYSLTISNLEQEDIGTYFCQ 92 (250)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC-----CCCEEEEEEccCChhhCEEEEEE
Confidence 68999999999999999999998421 110 011111110 01134799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 93 ~~n~~~ 98 (250)
T 3esu_F 93 QGNTLP 98 (250)
T ss_dssp ECSSSS
T ss_pred EeeCCC
Confidence 988644
No 349
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.03 E-value=3.8e-10 Score=57.02 Aligned_cols=72 Identities=14% Similarity=0.230 Sum_probs=49.0
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEE------ecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEW------FLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+.+++ .+.|++++..+........... ........+.|.|......| .|.|.|.+.|...
T Consensus 140 g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 140 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 219 (246)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCC
Confidence 7889999999887654 7999999988765321110000 01122334568888888888 8999999998654
Q ss_pred c
Q psy11826 74 I 74 (83)
Q Consensus 74 ~ 74 (83)
.
T Consensus 220 ~ 220 (246)
T 4dzb_B 220 S 220 (246)
T ss_dssp C
T ss_pred C
Confidence 3
No 350
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.03 E-value=2.2e-09 Score=53.06 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=46.6
Q ss_pred CceEEEEeE-eCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 3 GRKITFFCM-AEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 3 g~~~~~~C~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
+..+.+.|. ..+.|++.+.|++++......... .....+.....+.|.|..+...|.|.|+|.+.|..+...
T Consensus 136 ~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~--~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~ 208 (225)
T 4fmk_A 136 QSVAVARCVSTGGRPPARITWISSLGGEAKDTQE--PGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEP 208 (225)
T ss_dssp SCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE--ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred eeeeeeeeeecCCCCCCEEEEEECCccccCCcce--EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeE
Confidence 445555565 456788899999876544322111 011112223356799999999999999999999877643
No 351
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.03 E-value=4.2e-10 Score=56.54 Aligned_cols=74 Identities=20% Similarity=0.430 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ........+.|.|..+...| |.|.|.+.|..+.....
T Consensus 135 ~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 210 (227)
T 1mju_H 135 SGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 210 (227)
T ss_dssp ---CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceE
Confidence 47889999999885 766 89999987654211000000 01112234679998888877 99999999977654433
No 352
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.03 E-value=7.7e-10 Score=54.48 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=46.4
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEE-----EEecC--CCe----EEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVH-----EWFLG--NNT----IKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~-----~~~~~--~~~----~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
.|+.+.|.|...+.+.+.+.|++++.......-.... ..... ..+ ...+|.|.+++.+|.|.|.|.+.+
T Consensus 13 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 92 (208)
T 3r4d_A 13 EDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTD 92 (208)
T ss_dssp TTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEEEEC
T ss_pred cCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEEEEc
Confidence 6899999999888888999999865422211100000 00000 000 012699999999999999999998
Q ss_pred CC
Q psy11826 71 PF 72 (83)
Q Consensus 71 ~~ 72 (83)
..
T Consensus 93 ~~ 94 (208)
T 3r4d_A 93 EN 94 (208)
T ss_dssp SS
T ss_pred cc
Confidence 75
No 353
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.03 E-value=1.8e-09 Score=56.07 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=50.7
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.+.|.. .+.|.|.+.|++++..+..... ..........+.|.|..+...|.|.|.|.+.|..+..
T Consensus 128 ~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~----~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 198 (308)
T 4fom_A 128 GNETVAAICIAATGKPVAHIDWEGDLGEMESTTT----SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEK 198 (308)
T ss_dssp CSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE----ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred CCceEEEEEEecCCcCCceEEEEECCcccccccc----eeeeecccccccceEEeeeecCCccEEEEEEccCCCC
Confidence 36788999974 6889999999998876643211 1111222334579999999999999999999977654
No 354
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.02 E-value=2.7e-10 Score=57.48 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=47.4
Q ss_pred CCceEEEEeEeCc---cCCCeEEEEeCCEEecccceEE------------------EEEEecCCCe------EEEEEEEc
Q psy11826 2 LGRKITFFCMAEG---FPRPHITWTKDDIELTFHKYFQ------------------VHEWFLGNNT------IKSKMEID 54 (83)
Q Consensus 2 ~g~~~~~~C~~~~---~~~~~~~w~~~~~~~~~~~~~~------------------~~~~~~~~~~------~~~~l~i~ 54 (83)
+|+.+.|.|.+.+ .+.+.+.|++++.......... .........+ ....|.|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~ 95 (250)
T 2fbo_J 16 AGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLT 95 (250)
T ss_dssp TTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEEEC
T ss_pred cCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEEEe
Confidence 6899999999877 7888999998764321000000 0000000000 12369999
Q ss_pred cCCCCCCeEEEEEeeCCCcc
Q psy11826 55 PATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 55 ~~~~~~~g~y~C~~~~~~g~ 74 (83)
+++.+|.|.|.|.+.+..+.
T Consensus 96 ~v~~~D~G~Y~C~~~~~~~~ 115 (250)
T 2fbo_J 96 HVHPQDGGRYWCQVAQWSIR 115 (250)
T ss_dssp SCCGGGCEEEEEEEECTTCC
T ss_pred eCChhhCeEEEEEeccCccC
Confidence 99999999999999987664
No 355
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.02 E-value=2.3e-09 Score=54.21 Aligned_cols=67 Identities=19% Similarity=0.444 Sum_probs=45.4
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEe--c---------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IEL--T---------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~--~---------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.| .+.+.|++.. ... . ...++.+... ......+|.|.+++.+|
T Consensus 16 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 16 PGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRD---NSKNTLYLQMNSLRAED 92 (247)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred cCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEe---CCCCEEEEEECcCCHHH
Confidence 689999999998877 6789999732 111 0 0112222111 11123579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 93 ~G~Y~C~~~n~ 103 (247)
T 2ghw_B 93 TAVYYCARDRS 103 (247)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEeeecc
Confidence 99999999886
No 356
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.02 E-value=7.3e-10 Score=53.69 Aligned_cols=59 Identities=12% Similarity=0.028 Sum_probs=43.6
Q ss_pred EEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 7 TFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 7 ~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|.|.+.+.|.|.+.|++++..+...... .+.+. ...|.|.|.|.+.|..+.......|
T Consensus 109 ~L~C~~~~~p~p~i~W~~~~~~l~~~~~~--------------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 109 TLTCEVLEGTDVELKLYQGKEHLRSLRQK--------------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEEEECSSCSSCEEEEEETTEEEEEESSS--------------EEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEEEeCCCCCcEEEEEECCEECcCCcce--------------EEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 58999988899999999999877633211 22222 3678899999999999887665543
No 357
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.02 E-value=6.4e-09 Score=52.84 Aligned_cols=67 Identities=15% Similarity=0.291 Sum_probs=46.2
Q ss_pred CCceEEEEeEeCccC-----CCeEEEEeCC--EEe---cc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFP-----RPHITWTKDD--IEL---TF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-----~~~~~w~~~~--~~~---~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+.+ .+.+.|++++ ... .. ..++.... ......|.|.+++.+|.|
T Consensus 48 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G 122 (252)
T 3bkj_L 48 LGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-----SGTDFTLRISRVEAEDLG 122 (252)
T ss_dssp TTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCE
T ss_pred CCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-----cCCEEEEEECCCCcccCE
Confidence 689999999998887 6889999843 111 00 11111111 011347999999999999
Q ss_pred EEEEEeeCCCc
Q psy11826 63 YYECVADNPFA 73 (83)
Q Consensus 63 ~y~C~~~~~~g 73 (83)
.|.|.+.+..+
T Consensus 123 ~Y~C~~~~~~~ 133 (252)
T 3bkj_L 123 VYYCFQASLVP 133 (252)
T ss_dssp EEEEEECSBSS
T ss_pred EEEEEEEcCCc
Confidence 99999988754
No 358
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.02 E-value=1.8e-09 Score=52.96 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=43.2
Q ss_pred eEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 5 KITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 5 ~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.+.|.|.+.+.|.|.+.|++++..+ .... ..+.+. ...+|.|.|.|.+.|..+......
T Consensus 117 ~v~L~C~~~~~p~~~~~W~~~g~~l-~~~~--------------~~i~~~-~~~~d~G~Y~C~a~N~~~~~~s~~ 175 (182)
T 1hnf_A 117 NTTLTCEVMNGTDPELNLYQDGKHL-KLSQ--------------RVITHK-WTTSLSAKFKCTAGNKVSKESSVE 175 (182)
T ss_dssp TTEEEEECSSCSSCEEEEEESSCEE-EEES--------------SCEEEE-CCSCEEEEEEEEEECSSCEEEEEE
T ss_pred cEEEEeEccCCCCCEEEEEECCEEC-CCCC--------------cEEEEe-cccCCCcEEEEEEEeCCCCcEEcc
Confidence 4678999999899999999999876 1110 112222 246889999999999999876544
No 359
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.01 E-value=5.4e-10 Score=56.99 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=41.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEecccceEE------EEEE--------ecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELTFHKYFQ------VHEW--------FLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~~~~~~~------~~~~--------~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
+|+.+.|.|.+.+.+.+.+.|++. +.......... .... .........+|.|.+++.+|+|.|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 95 (259)
T 3omz_A 16 TGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGVYY 95 (259)
T ss_dssp TTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEEEE
T ss_pred CCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEEEE
Confidence 589999999998888899999972 21110000000 0000 0001112346999999999999999
Q ss_pred EEeeCCCc
Q psy11826 66 CVADNPFA 73 (83)
Q Consensus 66 C~~~~~~g 73 (83)
|.+.+..+
T Consensus 96 C~~~~~~~ 103 (259)
T 3omz_A 96 CATWDQNY 103 (259)
T ss_dssp EEEECTTS
T ss_pred EEEeeCCc
Confidence 99988654
No 360
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.01 E-value=6.4e-09 Score=53.12 Aligned_cols=69 Identities=19% Similarity=0.387 Sum_probs=46.6
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.| .+.+.|++. +..+. ...++.+... ......+|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~D 90 (256)
T 1nqb_A 14 PGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVD---KPSSTAYMQLSSLTSED 90 (256)
T ss_dssp TTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEe---cCCCEEEEEECcCChhh
Confidence 689999999998875 678999983 22110 0111221110 01113579999999999
Q ss_pred CeEEEEEeeCCCc
Q psy11826 61 AGYYECVADNPFA 73 (83)
Q Consensus 61 ~g~y~C~~~~~~g 73 (83)
+|.|.|.+.+..|
T Consensus 91 sG~Y~C~~~n~~g 103 (256)
T 1nqb_A 91 SAVYYCARYDYYG 103 (256)
T ss_dssp CEEEEEEECCTTS
T ss_pred CEEEEEEEeeccC
Confidence 9999999998755
No 361
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.01 E-value=2.6e-10 Score=57.70 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=49.8
Q ss_pred CCceEEEEeEeCccCCCe-----EEEEeCCEEecccceE------EEEEEecCC-------CeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRPH-----ITWTKDDIELTFHKYF------QVHEWFLGN-------NTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-----~~w~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+.+.|.+. +.|++++......... ......... .....+|.|.+++.+|+|.
T Consensus 17 ~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 96 (248)
T 3pv7_A 17 LNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGE 96 (248)
T ss_dssp TTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEE
T ss_pred CCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCeE
Confidence 589999999998887765 9999853221110000 000000000 0112359999999999999
Q ss_pred EEEEeeCCCcceeeEEEE
Q psy11826 64 YECVADNPFAIDRRGFRT 81 (83)
Q Consensus 64 y~C~~~~~~g~~~~~~~~ 81 (83)
|.|.+.+..+.......|
T Consensus 97 Y~C~~~~~~~~~~~~~~L 114 (248)
T 3pv7_A 97 YRCEVVVTPLKAQGTVQL 114 (248)
T ss_dssp EEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeCCccceeEEEE
Confidence 999999877665544443
No 362
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.01 E-value=7.4e-09 Score=53.34 Aligned_cols=67 Identities=16% Similarity=0.295 Sum_probs=47.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE-----Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI-----ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|++++. .+.. ..++.... .....+|.|.+++.+|+|.|.|.
T Consensus 26 ~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 26 VGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-----SGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-----cCCeEEEEEccCChhhCEEEEEE
Confidence 68999999999999999999997431 1110 11121111 01134799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 101 ~~n~~~ 106 (276)
T 3auv_A 101 QHYTTP 106 (276)
T ss_dssp ECSSSS
T ss_pred EecCCc
Confidence 988644
No 363
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.01 E-value=2.8e-09 Score=48.05 Aligned_cols=75 Identities=11% Similarity=0.156 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCccCCC-----eEEEEeCCEE-e-cccceEEEEEEecC--CCe-----EEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-----HITWTKDDIE-L-TFHKYFQVHEWFLG--NNT-----IKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-----~~~w~~~~~~-~-~~~~~~~~~~~~~~--~~~-----~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|...+.|.+ .+.|++.+.. + .............. ..+ ...+|.|.+++.+|+|.|.|.
T Consensus 8 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G~Y~C~ 87 (110)
T 1ncn_A 8 FNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCI 87 (110)
T ss_dssp TTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCEEEEEE
T ss_pred eCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCEEEEEE
Confidence 58999999998655433 4899986531 1 00000000000000 000 024799999999999999999
Q ss_pred eeCCCccee
Q psy11826 68 ADNPFAIDR 76 (83)
Q Consensus 68 ~~~~~g~~~ 76 (83)
+.+..+...
T Consensus 88 v~~~~~~~~ 96 (110)
T 1ncn_A 88 IHHKKPTGM 96 (110)
T ss_dssp EEEECSSSE
T ss_pred EEcCCCCce
Confidence 988766543
No 364
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.00 E-value=3.6e-09 Score=52.39 Aligned_cols=68 Identities=12% Similarity=0.280 Sum_probs=45.1
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeC--CEEec----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKD--DIELT----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
..|+.+.|.|.+.+.+ .+.+.|+++ +.... ...++.+... ......+|.|.+++.+|
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 13 KPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRD---TSKNQYYLDLNSVTTED 89 (210)
T ss_dssp CTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred cCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEec---CCCCEEEEEECCCCccc
Confidence 3689999999988765 478999874 22111 0112221110 01113579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 90 ~G~Y~C~~~~~ 100 (210)
T 3d9a_H 90 TATYYCANWDG 100 (210)
T ss_dssp CEEEEEEETTS
T ss_pred CEEEEEEEecC
Confidence 99999999885
No 365
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.00 E-value=3.2e-09 Score=47.91 Aligned_cols=67 Identities=15% Similarity=0.284 Sum_probs=44.0
Q ss_pred CCceEEEEeE-eCccC-CCeEEEEeCCEEec---c---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCM-AEGFP-RPHITWTKDDIELT---F---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~-~~~~~-~~~~~w~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.+.|.|. ..+.+ .+.+.|++...... . ..++..... .......|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~DsG~Y~C~ 90 (109)
T 1pew_A 14 PGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSID---RSSNSASLTISGLKTEDEADYYCQ 90 (109)
T ss_dssp TTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEec---cCCCEEEEEECCCChhhCEEEEEE
Confidence 6899999999 76654 47899998652110 0 112222110 112245799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 91 ~~~~ 94 (109)
T 1pew_A 91 SYDA 94 (109)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9764
No 366
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.00 E-value=1.4e-08 Score=45.93 Aligned_cols=65 Identities=15% Similarity=0.305 Sum_probs=44.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.++|.|...+.+.+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 18 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 92 (111)
T 1i3g_L 18 VGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG-----SGTDFTLTISNVQSEDLADYFCQ 92 (111)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc-----CCCEEEEEECCCCHHHCEEEEEE
Confidence 6899999999888777889999743 1 1110 11111110 11135799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 93 ~~~~ 96 (111)
T 1i3g_L 93 QYSS 96 (111)
T ss_dssp ECSS
T ss_pred EecC
Confidence 9875
No 367
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.00 E-value=8.6e-10 Score=51.12 Aligned_cols=70 Identities=21% Similarity=0.309 Sum_probs=43.5
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEE----eccc-----ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIE----LTFH-----KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.++|.|...+. +.+.+.|++.+.. +... .+................|.|.+++.+|+|.|.|.+.+.
T Consensus 17 ~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (127)
T 2jju_A 17 AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRK 96 (127)
T ss_dssp TTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEEEcC
Confidence 58999999998765 5678999986511 1000 011110000000111347999999999999999998764
No 368
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.00 E-value=6.8e-09 Score=52.46 Aligned_cols=65 Identities=17% Similarity=0.388 Sum_probs=44.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEecc--------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELTF--------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
.|+.+.|.|.+.+.+.+.+.|++. +..... ..++..... .....+|.|.+++.+|+|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~----~~~~~sL~I~~v~~~D~G~Y~ 90 (245)
T 3nfj_J 15 VGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRP----QDRQFILSSKKLLLSDSGFYL 90 (245)
T ss_dssp TTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEE----ETTEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEec----CCCEEEEEECCCChhhCEEEE
Confidence 589999999998889999999982 211100 011111110 011357999999999999999
Q ss_pred EEeeC
Q psy11826 66 CVADN 70 (83)
Q Consensus 66 C~~~~ 70 (83)
|.+.+
T Consensus 91 C~~~~ 95 (245)
T 3nfj_J 91 CAWSV 95 (245)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 99988
No 369
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.00 E-value=7e-10 Score=56.32 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=46.8
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
|+.+.|.|.+.+. |. ..+.|+++|..+............+......+.|.+......+.|.|.|.+.|....
T Consensus 138 g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 138 QSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 6789999999885 44 379999999877543211111111122334456777666556789999999987643
No 370
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.00 E-value=2.5e-09 Score=54.45 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=46.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++. +..+. ...++.... ......|.|.+++.+|+|.|.|.
T Consensus 152 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 226 (256)
T 3umt_A 152 LGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSR-----SGSDYSLTISSLESEDFVDYYCL 226 (256)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEec-----CCCEEEEEECCCChhHCEEEEEE
Confidence 589999999999988889999983 22111 011111110 11134699999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.+..
T Consensus 227 ~~~~~ 231 (256)
T 3umt_A 227 QYASS 231 (256)
T ss_dssp ECSSS
T ss_pred EeeCC
Confidence 98854
No 371
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.00 E-value=3.7e-09 Score=54.00 Aligned_cols=66 Identities=15% Similarity=0.265 Sum_probs=46.0
Q ss_pred CCceEEEEeEeCccCCC-----eEEEEe--CCEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFPRP-----HITWTK--DDIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-----~~~w~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+.|.+ .+.|++ ++..+.. ..++.... ......|.|.+++.+|+|
T Consensus 135 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG 209 (256)
T 1nqb_A 135 LGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-----SGTDFTLKISRVEAEDLG 209 (256)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCE
T ss_pred cCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEc-----cCCEEEEEECCCChHHCE
Confidence 58899999999988765 899998 4543210 11121110 011357999999999999
Q ss_pred EEEEEeeCCC
Q psy11826 63 YYECVADNPF 72 (83)
Q Consensus 63 ~y~C~~~~~~ 72 (83)
.|.|.+.+..
T Consensus 210 ~Y~C~a~~~~ 219 (256)
T 1nqb_A 210 VYYCFQGSHV 219 (256)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEccCC
Confidence 9999998743
No 372
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.99 E-value=5.1e-09 Score=52.99 Aligned_cols=67 Identities=10% Similarity=0.267 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEec----------------ccceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELT----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
.|+.+.|.|.+.+.+ .+.+.|++. +..+. ...++.+.. ........|.|.+++.+|+
T Consensus 136 ~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~---~~~~~~~~L~I~~v~~~D~ 212 (242)
T 2znx_A 136 PSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITR---DTSKNQYYLDLNSVTTEDT 212 (242)
T ss_dssp TTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEE---ETTTTEEEEEECSCCGGGC
T ss_pred CCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEe---cCCCCEEEEEECCCCcCcC
Confidence 588999999998775 578999984 22110 011121111 0111235799999999999
Q ss_pred eEEEEEeeCC
Q psy11826 62 GYYECVADNP 71 (83)
Q Consensus 62 g~y~C~~~~~ 71 (83)
|.|.|.+.+.
T Consensus 213 G~Y~C~a~~~ 222 (242)
T 2znx_A 213 ATYYCANXDG 222 (242)
T ss_dssp EEEEEEETTS
T ss_pred EEEEEeccCC
Confidence 9999999873
No 373
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.99 E-value=9e-10 Score=50.44 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=47.3
Q ss_pred CCceEEEEeEeCc--cCCCeEEEEeCCEEeccc--ceEEEEEEecCCCeE----EEEEEEccCCCCCCeEEEEEeeC-CC
Q psy11826 2 LGRKITFFCMAEG--FPRPHITWTKDDIELTFH--KYFQVHEWFLGNNTI----KSKMEIDPATQKDAGYYECVADN-PF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~--~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~~-~~ 72 (83)
.|+.+.|.|...+ .+.+.+.|++.+..+... ....... .....+. ..+|.|.+++.+|.|.|.|.+.. ..
T Consensus 17 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~-~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~ 95 (117)
T 3q0h_A 17 KGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHIS-PSFKDRVAPGPGLGLTLQSLTVNDTGEYFCIYHTYPD 95 (117)
T ss_dssp TTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECC-GGGTTTEEECSTTCEEECSCCGGGCEEEEEEEEEETT
T ss_pred cCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeC-ccccCcEEeCCceEEEEeeCChhhCEEEEEEEEECCC
Confidence 6899999999766 233468999976533210 0000000 0000000 23699999999999999998754 45
Q ss_pred cceeeEEEE
Q psy11826 73 AIDRRGFRT 81 (83)
Q Consensus 73 g~~~~~~~~ 81 (83)
|.......|
T Consensus 96 g~~~~~~~L 104 (117)
T 3q0h_A 96 GTYTGRIFL 104 (117)
T ss_dssp CCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 655554443
No 374
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.99 E-value=2.6e-09 Score=58.61 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=47.1
Q ss_pred CCceEEEEeEeCccCC---CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR---PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+.++ +.+.| ++..+.............+.....+.|.|..+..+|.|.|.|.+.|..+..
T Consensus 261 ~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~ 335 (475)
T 1iga_A 261 LGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKT 335 (475)
T ss_pred cCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCC
Confidence 5889999999888754 58999 333332211100000001112245679999999999999999999988764
No 375
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.99 E-value=5.4e-09 Score=53.84 Aligned_cols=67 Identities=18% Similarity=0.339 Sum_probs=45.5
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|++++ .... ...++..... .......|.|.+++.+|
T Consensus 148 ~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 224 (276)
T 3auv_A 148 PGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISAD---TSKNTAYLQMNSLRAED 224 (276)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEec---CCCcEEEEEECCCChhH
Confidence 588999999998876 5899999853 1110 0111221110 01123479999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.|.
T Consensus 225 sG~Y~C~a~n~ 235 (276)
T 3auv_A 225 TAVYYCARFVF 235 (276)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEEcC
Confidence 99999999997
No 376
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.99 E-value=9.6e-10 Score=53.67 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=43.4
Q ss_pred ceEEEEeEe-CccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEE
Q psy11826 4 RKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80 (83)
Q Consensus 4 ~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~ 80 (83)
..+.|.|.+ .+ |.|.+.|++++..+.... ..+|.+.. ..|.|.|.|.+.|..+.......
T Consensus 116 ~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~~--------------~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 116 SNATLTCEVLEG-TDVELKLYQGKEHLRSLR--------------QKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp GGTEEEEECSSC-TTCEEEEEETTEEEEEES--------------SSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEEeCCC-CCCEEEEEECCeECcCCC--------------CCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 346899998 56 999999999998765111 12344422 67899999999999987765543
No 377
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.99 E-value=4.5e-09 Score=52.88 Aligned_cols=67 Identities=22% Similarity=0.358 Sum_probs=46.4
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+.+.| .+.+.|+++. .. +.. ..++.... .....+|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 15 LGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-----SRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEE
T ss_pred CCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-----cCCeEEEEEcCCChhhCEE
Confidence 689999999999887 7889999842 11 100 11111111 0113479999999999999
Q ss_pred EEEEeeCCCc
Q psy11826 64 YECVADNPFA 73 (83)
Q Consensus 64 y~C~~~~~~g 73 (83)
|.|.+.+..+
T Consensus 90 Y~C~~~n~~~ 99 (240)
T 1moe_A 90 YYCQQTNEDP 99 (240)
T ss_dssp EEEEECSSSS
T ss_pred EEEEEccCCc
Confidence 9999998754
No 378
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.99 E-value=8e-10 Score=56.78 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=47.9
Q ss_pred CCceEEEEeEeCccCCCe-EEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEee-CCCcce
Q psy11826 2 LGRKITFFCMAEGFPRPH-ITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVAD-NPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~-~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~-~~~g~~ 75 (83)
.|+.+.|.|.+.+.+.+. +.|++ ++..+.......... ...|.|..++.+|.|.|.|.+. +..+..
T Consensus 103 ~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~--------~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~ 171 (289)
T 3ejj_X 103 EGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSP--------WRGFIIRKAKVLDSNTYVCKTMVNGREST 171 (289)
T ss_dssp TTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEET--------TTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECC--------CCCEEEeecccccCEEEEEEEEeCCCccc
Confidence 588899999998877765 99986 666655444333211 1258999999999999999998 544443
No 379
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.99 E-value=4.4e-09 Score=58.38 Aligned_cols=73 Identities=19% Similarity=0.228 Sum_probs=50.7
Q ss_pred CCceEEEEeEeCccCCC--eEEEEeCCEEecccceEE-EEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQ-VHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.+++ .+.|++++..+....... .....+......+.|.|......|.|.|.|.+.|..+.
T Consensus 311 ~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 311 LRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred cCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 48899999999887443 799999998755211111 11111122344567999999999999999999987664
No 380
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.99 E-value=1.1e-09 Score=59.73 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=44.2
Q ss_pred CCceEEEEeEeCccCCC----eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPRP----HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.+++ .+.|++++..+...................+.|.|......|.|.|.|.+.|..+.
T Consensus 263 ~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~ 339 (457)
T 1hzh_H 263 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 339 (457)
T ss_dssp TTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSS
T ss_pred cCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCC
Confidence 58899999999887653 89999999877543221111111111122333433333333499999999976543
No 381
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.98 E-value=6.3e-10 Score=60.65 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=47.5
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
+..+.|.|.+.+.+++ .+.|+++|..+............+......+.|.+......|.|.|.|.+.|....
T Consensus 370 ~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 370 KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCcEEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 3348999999887554 89999999887643221111111122234456777776667899999999997543
No 382
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.98 E-value=2.5e-09 Score=55.97 Aligned_cols=69 Identities=20% Similarity=0.163 Sum_probs=49.5
Q ss_pred CCCceEEEEeEeCcc-----CCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 1 MLGRKITFFCMAEGF-----PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~-----~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
..|+.+.|.|.+.+. |.+.+.|.+++..+.... .. ........+.|.|.++...|.|.|.|.+.+..+.
T Consensus 13 ~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~-~~----~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 13 HLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGR-QQ----RLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp CTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCE-EC----CCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred cCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccc-eE----EEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 368999999998886 568899999998765321 10 0111111257999999999999999988765443
No 383
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.98 E-value=7.5e-09 Score=52.62 Aligned_cols=69 Identities=17% Similarity=0.353 Sum_probs=45.1
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+.+ .+.+.|++. +..+.. ..++.... .......+|.|.+++.+|
T Consensus 15 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~~L~I~~v~~~D 91 (253)
T 3uzq_A 15 PGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITA---DTSSNTAYLHLSSLTSGD 91 (253)
T ss_dssp TTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEE---ETTTTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEe---ecCCCeEEEEeCCCCccc
Confidence 689999999988754 678999982 211110 01111111 011113469999999999
Q ss_pred CeEEEEEeeCCCc
Q psy11826 61 AGYYECVADNPFA 73 (83)
Q Consensus 61 ~g~y~C~~~~~~g 73 (83)
+|.|.|.+.+..+
T Consensus 92 sG~Y~C~~~~~~~ 104 (253)
T 3uzq_A 92 TAVYYCSRGWEGF 104 (253)
T ss_dssp CEEEEEEECSSSC
T ss_pred CEEEEEEEeeCCc
Confidence 9999999988543
No 384
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.98 E-value=4.6e-09 Score=56.39 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=48.6
Q ss_pred CCceEEEEeEeCcc-CCC---eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGF-PRP---HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
+|+.+.|.|.+.+. |.| .+.|++++..+...................+.|.|..++.+|.|.|.|.+.+..+.
T Consensus 182 ~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 182 ITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCC
Confidence 57889999998887 333 69999988654322111000111122234557999999999999999999987653
No 385
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.97 E-value=1.2e-09 Score=55.69 Aligned_cols=75 Identities=20% Similarity=0.380 Sum_probs=49.2
Q ss_pred CCceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+.+ .|.+ .+.|++++........... .. .......+.|.|......| |.|.|.+.+..+......
T Consensus 138 ~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~-~~-~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~ 214 (253)
T 3liz_H 138 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV-LQ-SDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 214 (253)
T ss_dssp -CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE-EE-TTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCcc-cc-CCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEE
Confidence 4788999999988 6666 7999998763321100000 00 1112234679999999889 999999999887654443
No 386
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.97 E-value=5.6e-10 Score=56.90 Aligned_cols=73 Identities=12% Similarity=0.196 Sum_probs=46.1
Q ss_pred CCceEEEEeEeC---ccCCCeEEEEeCCEEecccceEE-------EE--------EEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAE---GFPRPHITWTKDDIELTFHKYFQ-------VH--------EWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~---~~~~~~~~w~~~~~~~~~~~~~~-------~~--------~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.|.+. +.+.+.+.|++.+.......... .. ...........+|.|.+++.+|+|.
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 98 (268)
T 3mj6_A 19 VGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGI 98 (268)
T ss_dssp TTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCEE
T ss_pred cCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCEE
Confidence 689999999987 67778899998543221110000 00 0000000112569999999999999
Q ss_pred EEEEeeCCCcc
Q psy11826 64 YECVADNPFAI 74 (83)
Q Consensus 64 y~C~~~~~~g~ 74 (83)
|.|.+.+..+.
T Consensus 99 Y~C~~~~~~~~ 109 (268)
T 3mj6_A 99 YTCEIRLKNES 109 (268)
T ss_dssp EEEEEEETTCC
T ss_pred EEEEEEecCCc
Confidence 99999876543
No 387
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.97 E-value=7.4e-09 Score=52.40 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|++.. . .+.. ..++.... .....+|.|.+++.+|+|.|.|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 89 (242)
T 2znx_A 15 PGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG-----SGTDFTLSINSVETEDFGMYFCQ 89 (242)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec-----CCCEEEEEECCCChHHCEEEEEe
Confidence 6899999999999988999999842 1 1110 11111111 01134799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 90 ~~n~~~ 95 (242)
T 2znx_A 90 QSNSXP 95 (242)
T ss_dssp ECSSSS
T ss_pred EecCCc
Confidence 988643
No 388
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.96 E-value=2.2e-08 Score=50.97 Aligned_cols=67 Identities=9% Similarity=0.239 Sum_probs=44.4
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--E--Eec--------------ccceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--I--ELT--------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~--~~~--------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.+.|.|.+.+. +.+.+.|++.. . ... ...++.+... ......+|.|.+++.+|+
T Consensus 22 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~Ds 98 (257)
T 3gkz_A 22 PSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRD---TSKNQVYLQLKSVSSEDT 98 (257)
T ss_dssp TTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEE---GGGTEEEEEECSCCGGGC
T ss_pred CCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEe---cCCceEEEEECCCChhhC
Confidence 68999999998874 57889999832 1 111 0011111110 011234799999999999
Q ss_pred eEEEEEeeCC
Q psy11826 62 GYYECVADNP 71 (83)
Q Consensus 62 g~y~C~~~~~ 71 (83)
|.|.|.+.+.
T Consensus 99 G~Y~C~~~n~ 108 (257)
T 3gkz_A 99 ATYYCSYFDS 108 (257)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEEEecC
Confidence 9999999886
No 389
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.96 E-value=2.1e-09 Score=54.65 Aligned_cols=66 Identities=20% Similarity=0.367 Sum_probs=45.4
Q ss_pred CCceEEEEeEeCccCCC----eEEEEeC--CEEec---c---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRP----HITWTKD--DIELT---F---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~----~~~w~~~--~~~~~---~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+.+.+.+ .+.|++. +.... . ..++.... ......|.|.+++.+|+|.
T Consensus 147 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~ 221 (253)
T 3uzq_A 147 LGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSG-----SRTDFTLTINPVEADDVAT 221 (253)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEE
T ss_pred CCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeC-----CCCEEEEEECCCCHHHCEE
Confidence 58999999999988876 8999984 22111 0 01111110 1113479999999999999
Q ss_pred EEEEeeCCC
Q psy11826 64 YECVADNPF 72 (83)
Q Consensus 64 y~C~~~~~~ 72 (83)
|.|.+.|..
T Consensus 222 Y~C~~~n~~ 230 (253)
T 3uzq_A 222 YFCQRSNEV 230 (253)
T ss_dssp EEEEECSSS
T ss_pred EEEEEccCC
Confidence 999998854
No 390
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.96 E-value=1.2e-09 Score=50.00 Aligned_cols=71 Identities=21% Similarity=0.254 Sum_probs=43.9
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEE---ec-ccc-----eEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIE---LT-FHK-----YFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~---~~-~~~-----~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
+|+.+.|.|...+. +.+.+.|++.+.. +. ... +................|.|.+++.+|+|.|.|.+.+.
T Consensus 21 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 21 AGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVKFQK 100 (120)
T ss_dssp TTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEEEEC
T ss_pred CCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEEEcC
Confidence 68999999998765 5678999997521 10 000 00000000000111246999999999999999998764
Q ss_pred C
Q psy11826 72 F 72 (83)
Q Consensus 72 ~ 72 (83)
.
T Consensus 101 ~ 101 (120)
T 2yz1_A 101 G 101 (120)
T ss_dssp C
T ss_pred C
Confidence 3
No 391
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.96 E-value=1.3e-08 Score=52.96 Aligned_cols=62 Identities=11% Similarity=0.200 Sum_probs=46.9
Q ss_pred CCceEEEEeEeCc-------cCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEG-------FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~-------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.+.|.|.+.+ .|.|.+.|.++|..+.... ..+. ... .+.|.|.++.+.+ |.|.|.+.+.
T Consensus 18 ~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~~-~~~~---~~~---~~~L~i~~~~~~~-g~Y~C~a~~~ 86 (303)
T 1i1r_A 18 LHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQ-YTII---NRT---ASSVTFTDIASLN-IQLTCNILTF 86 (303)
T ss_dssp TTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGGG-CEEE---ETT---EEEEEECSCCCSE-EEEEEEEEET
T ss_pred CCCCEEEEEEECCccccccCCChhheEEEECCEECChhh-eeee---CCc---EEEEEEcCcCCCc-eEEEEecccC
Confidence 5899999999985 4788999999998886542 2221 111 3579999998874 9999999774
No 392
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.96 E-value=1.5e-09 Score=54.70 Aligned_cols=72 Identities=19% Similarity=0.333 Sum_probs=49.7
Q ss_pred CceEEEEeEeCcc-C-CCeEEEEeCCEEecccceEEE--EEE--------ec-CCCeEEEEEEEccCCCCCCeEEEEEee
Q psy11826 3 GRKITFFCMAEGF-P-RPHITWTKDDIELTFHKYFQV--HEW--------FL-GNNTIKSKMEIDPATQKDAGYYECVAD 69 (83)
Q Consensus 3 g~~~~~~C~~~~~-~-~~~~~w~~~~~~~~~~~~~~~--~~~--------~~-~~~~~~~~l~i~~~~~~~~g~y~C~~~ 69 (83)
+..+.|.|.+.+. | .+.+.|+++|..+........ ... .+ ......+.|.|......|.|.|.|.+.
T Consensus 133 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~ 212 (231)
T 2w59_A 133 LSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAV 212 (231)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred cCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEE
Confidence 4568999999886 4 368999999998865431111 111 11 223345678888888888999999999
Q ss_pred CCCcc
Q psy11826 70 NPFAI 74 (83)
Q Consensus 70 ~~~g~ 74 (83)
|....
T Consensus 213 n~~l~ 217 (231)
T 2w59_A 213 HEALP 217 (231)
T ss_dssp CTTST
T ss_pred cCCCC
Confidence 87654
No 393
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=53.12 Aligned_cols=73 Identities=22% Similarity=0.314 Sum_probs=46.7
Q ss_pred CCceEEEEeEeCccCCCe---EEEEeCCEEecccce--------EEEEE--------EecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFPRPH---ITWTKDDIELTFHKY--------FQVHE--------WFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~---~~w~~~~~~~~~~~~--------~~~~~--------~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+.|.+. +.|++++........ ..... ..........+|.|.+++.+|.|
T Consensus 13 ~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 92 (218)
T 4frw_A 13 LGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEG 92 (218)
T ss_dssp TTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGGCE
T ss_pred cCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHHCC
Confidence 689999999998887764 799987643322110 00000 00000111246999999999999
Q ss_pred EEEEEeeCCCcc
Q psy11826 63 YYECVADNPFAI 74 (83)
Q Consensus 63 ~y~C~~~~~~g~ 74 (83)
.|.|.+.+..+.
T Consensus 93 ~Y~C~~~~~~~~ 104 (218)
T 4frw_A 93 EYECRVSTFPAG 104 (218)
T ss_dssp EEEEEEEEETTE
T ss_pred ceeEEEEeccCc
Confidence 999998875543
No 394
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.95 E-value=4.8e-09 Score=54.23 Aligned_cols=65 Identities=18% Similarity=0.329 Sum_probs=45.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+ +.+.|++ ++..+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 176 ~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~Y~C~ 249 (282)
T 1qok_A 176 PGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSG-----SGTSYSLTISRMEAEDAATYYCQ 249 (282)
T ss_dssp TTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEec-----CCCEEEEEEccCChhHCEEEEEE
Confidence 588999999999988 8999998 4543210 11121110 01134799999999999999999
Q ss_pred eeCCC
Q psy11826 68 ADNPF 72 (83)
Q Consensus 68 ~~~~~ 72 (83)
+.+..
T Consensus 250 a~~~~ 254 (282)
T 1qok_A 250 QRSSY 254 (282)
T ss_dssp ECSSS
T ss_pred EeeCC
Confidence 98743
No 395
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=98.95 E-value=3.2e-08 Score=44.14 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=42.8
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.|+.++ .+.|.++|..+............+......+.|.+ ..++.+.|.|.+.+..-
T Consensus 18 ~~~~~L~C~~~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l~v---~~~~~~~ytC~V~H~~l 87 (99)
T 1lk2_B 18 GKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEF---TPTETDTYACRVKHDSM 87 (99)
T ss_dssp TSCEEEEEEEEEEBSSCCEEEEEETTEECTTCEEEEEEECTTCCEEEEEEEEE---CCCSSCCEEEEEECTTS
T ss_pred CCCEEEEEEEEEEECCCcEEEEEECCEECCCceeCCeEECCCCcEEEEEEEEE---eCCCCCEEEEEEEcCCC
Confidence 5678999999997544 78999999887532212222211222233444544 45677889999987643
No 396
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.95 E-value=5.3e-10 Score=55.73 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=46.1
Q ss_pred CCceEEEEeEeCc-cCCCe----EEEEeCCEEeccc-------------ceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEG-FPRPH----ITWTKDDIELTFH-------------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~----~~w~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+.+ .+.+. +.|++++...... .+...............+|.|.+++.+|+|.
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~ 92 (221)
T 3eow_R 13 LGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGS 92 (221)
T ss_dssp CSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSC
T ss_pred eCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeE
Confidence 6899999999844 44433 8999986422110 1111100000001123479999999999999
Q ss_pred EEEEeeCCC-cceee
Q psy11826 64 YECVADNPF-AIDRR 77 (83)
Q Consensus 64 y~C~~~~~~-g~~~~ 77 (83)
|.|.+.+.. +....
T Consensus 93 Y~C~~~~~~~~~~~~ 107 (221)
T 3eow_R 93 YTCLFVTFPQGSRSV 107 (221)
T ss_dssp BEEEEEESSSCSCEE
T ss_pred EEEEEEeCCCCceEE
Confidence 999998765 44433
No 397
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.95 E-value=1.4e-09 Score=54.22 Aligned_cols=72 Identities=21% Similarity=0.426 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEE--EEEE---ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQ--VHEW---FLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.|. |. +.+.|+++|..+....... .... .+......+.|.+......+.+.|.|.+.|...
T Consensus 121 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 121 LNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp SSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred cCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 47789999999886 43 4899999998876542111 1111 112223445666665554557899999998654
No 398
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.95 E-value=6.7e-09 Score=52.88 Aligned_cols=67 Identities=16% Similarity=0.266 Sum_probs=45.6
Q ss_pred CCceEEEEeEeCccCC-CeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCMAEGFPR-PHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
.|+.+.|.|.+.+.+. +.+.|++. +.... ...++.... . .....|.|.+++.+|+|.|.|
T Consensus 163 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~---~~~~~L~I~~v~~~DsG~Y~C 237 (256)
T 3juy_B 163 PGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSG--S---GTDFTLTITRVEPEDFALYYC 237 (256)
T ss_dssp TTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--E---TTEEEEEESSCCGGGCSEEEE
T ss_pred CCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEc--c---CCEEEEEECCCCHhHCEEEEE
Confidence 5889999999988776 89999872 22111 011111111 0 113469999999999999999
Q ss_pred EeeCCCc
Q psy11826 67 VADNPFA 73 (83)
Q Consensus 67 ~~~~~~g 73 (83)
.+.+...
T Consensus 238 ~~~~~~~ 244 (256)
T 3juy_B 238 QVYGASS 244 (256)
T ss_dssp EECCSSC
T ss_pred EEeeCCC
Confidence 9988543
No 399
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.95 E-value=4.1e-09 Score=53.12 Aligned_cols=71 Identities=15% Similarity=0.270 Sum_probs=48.2
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEE--EEEEecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQ--VHEWFLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+ .|.+ .+.|+++|..+....... ............+.|.|......| .|.|.|.+.+...
T Consensus 137 g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 137 KQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 678999999988 5556 689999998876532211 011111222334568999888888 6799999987654
No 400
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.94 E-value=6.2e-10 Score=58.83 Aligned_cols=71 Identities=15% Similarity=0.268 Sum_probs=47.0
Q ss_pred CceEEEEeEeCcc-C-CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-P-RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|..+.|.|.+.|. | .+.+.|+++|..+............+......+.|.+......|.|.|.|.+.|...
T Consensus 257 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l 329 (344)
T 1za6_B 257 KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 329 (344)
T ss_dssp SSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTS
T ss_pred CCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCC
Confidence 5569999999885 3 358999999977654321111111112223445677777777789999999998654
No 401
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.94 E-value=5.9e-09 Score=53.90 Aligned_cols=69 Identities=19% Similarity=0.406 Sum_probs=46.3
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|++.+ ..+. ...++..... ......+|.|.+++.+|
T Consensus 40 ~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 40 SGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTD---TSSNTAYLQLSSLTSED 116 (282)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred CCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEe---cCCCeEEEEECcCChhh
Confidence 588999999988775 5789999843 1110 0011111110 01123579999999999
Q ss_pred CeEEEEEeeCCCc
Q psy11826 61 AGYYECVADNPFA 73 (83)
Q Consensus 61 ~g~y~C~~~~~~g 73 (83)
+|.|.|.+.+..|
T Consensus 117 sG~Y~C~~~n~~g 129 (282)
T 1qok_A 117 TAVYYCNEGTPTG 129 (282)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEeccCCC
Confidence 9999999998765
No 402
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.94 E-value=1.8e-09 Score=55.01 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=46.7
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.+ ...+.|+++|..+............+......+.|.|......|.+.|.|.+.+..+.
T Consensus 38 ~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~ 114 (240)
T 4acp_A 38 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 114 (240)
T ss_dssp SSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC---
T ss_pred cCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCC
Confidence 488899999998864 2379999999887543211101111122334467888777777789999999987763
No 403
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.94 E-value=2.3e-09 Score=49.79 Aligned_cols=81 Identities=7% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCceEEEEeEeCccCC-----CeEEEEeCCEEecc--cc-eEEEEE--------EecCCCeEEEEEEEccCCC-CCCeEE
Q psy11826 2 LGRKITFFCMAEGFPR-----PHITWTKDDIELTF--HK-YFQVHE--------WFLGNNTIKSKMEIDPATQ-KDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-----~~~~w~~~~~~~~~--~~-~~~~~~--------~~~~~~~~~~~l~i~~~~~-~~~g~y 64 (83)
.++++.+.|.....++ ..|.|.+++..+.. .. ...... ....-..+.++|.|..++. +|.|.|
T Consensus 15 ~n~~vtLpC~l~~~~~~~~~~m~V~W~~~~~~i~~~~G~~~~~~q~~~~~~a~l~~~~l~~GnaSL~i~~v~~~sD~G~Y 94 (127)
T 2jjs_C 15 GNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNY 94 (127)
T ss_dssp TCSEEEECCBBSSCCCSSGGGEEEEEEETTEEEEEEEGGGTEEECCGGGTTCBCCGGGGGGTBCCEEEEHHHHHTSCEEE
T ss_pred cCCCEEEEEEeCCcCCCCcceEEEEEEECCeEeEeeCCceeeccccccccceEechhhhccCcEEEEEcccccccCCcEE
Confidence 4788999999875443 36899998876543 11 110000 0000112236899999998 699999
Q ss_pred EEEeeCCCcceeeEEEEe
Q psy11826 65 ECVADNPFAIDRRGFRTD 82 (83)
Q Consensus 65 ~C~~~~~~g~~~~~~~~~ 82 (83)
+|.+........+.+.|+
T Consensus 95 tC~v~~~~~~~~~~i~Lk 112 (127)
T 2jjs_C 95 TCEVTELTREGETIIELK 112 (127)
T ss_dssp EEEEEETTEEEEEEEEEE
T ss_pred EEEEEeCCceEEEEEEEE
Confidence 999988776666666554
No 404
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.94 E-value=7.4e-09 Score=46.82 Aligned_cols=65 Identities=23% Similarity=0.399 Sum_probs=43.9
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCC--E--E-ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDD--I--E-LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~--~--~-~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.|...+.+ .+.+.|++.. . . +.. ..++.... ......|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG~ 89 (111)
T 1j05_L 15 LGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-----SRTDFTLIIDPVEADDVAT 89 (111)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEE
T ss_pred CCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc-----cCCEEEEEECCCCcccCEE
Confidence 689999999988766 4679999742 1 1 110 11121110 1113479999999999999
Q ss_pred EEEEeeCC
Q psy11826 64 YECVADNP 71 (83)
Q Consensus 64 y~C~~~~~ 71 (83)
|.|.+.+.
T Consensus 90 Y~C~~~~~ 97 (111)
T 1j05_L 90 YYCQQTNE 97 (111)
T ss_dssp EEEEECSS
T ss_pred EEEEEecC
Confidence 99999875
No 405
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.94 E-value=6.6e-09 Score=48.27 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=43.5
Q ss_pred CCceEEEEeEeC---ccCCCeEEEEeCCEEeccc---c---------------eEEEEEEec--CCC----eEEEEEEEc
Q psy11826 2 LGRKITFFCMAE---GFPRPHITWTKDDIELTFH---K---------------YFQVHEWFL--GNN----TIKSKMEID 54 (83)
Q Consensus 2 ~g~~~~~~C~~~---~~~~~~~~w~~~~~~~~~~---~---------------~~~~~~~~~--~~~----~~~~~l~i~ 54 (83)
.|+.+.|.|... ..+.+.+.|++.+...... . ......... ... ....+|.|.
T Consensus 18 ~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~sL~I~ 97 (135)
T 1xt5_A 18 AGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLRLT 97 (135)
T ss_dssp TTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTTSCCEEEC
T ss_pred CCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCCCCeEEEC
Confidence 588999999964 3577889999854321000 0 000000000 000 012469999
Q ss_pred cCCCCCCeEEEEEeeCCC
Q psy11826 55 PATQKDAGYYECVADNPF 72 (83)
Q Consensus 55 ~~~~~~~g~y~C~~~~~~ 72 (83)
+++.+|+|.|.|.+.+..
T Consensus 98 ~v~~~D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 98 HVHPQDGGRYWCQVAQWS 115 (135)
T ss_dssp SCCGGGCEEEEEEEECSS
T ss_pred CCChhhCcEEEEEEEcCC
Confidence 999999999999998853
No 406
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.94 E-value=4.6e-09 Score=56.39 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=49.4
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.+ .+.|.|++++..+............+......+.|.+......|.+.|.|.+.+...
T Consensus 288 ~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 288 AKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred cCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 367899999999863 357899999987754322111111122334556788888777789999999998654
No 407
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.93 E-value=9.5e-10 Score=56.67 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=48.0
Q ss_pred CCceEEEEeEeCccCC-CeEEEE-eCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCe-EEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPR-PHITWT-KDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG-YYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g-~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+ |. +.+.|+ +++..+.......... ...|.|..++.+|.| .|.|.+.|..+.
T Consensus 105 ~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~--------~~~L~i~~v~~~d~G~~Y~C~a~n~~~~ 171 (290)
T 2o26_X 105 EDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNP--------KAGITIKNVKRAYHRLCVRCAAQRDGTW 171 (290)
T ss_dssp TTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEET--------TTEEEEESCCGGGTTCEEEEEEEETTEE
T ss_pred cCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCC--------CCCEEEecccHHHCCCEEEEEEEECCce
Confidence 4888999999885 77 899995 6776665543322211 126899999999999 999999997555
No 408
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.93 E-value=3.9e-10 Score=62.96 Aligned_cols=72 Identities=15% Similarity=0.319 Sum_probs=51.2
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCCEEeccc------------ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDDIELTFH------------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.++|.|.+ .+.|.+.+.|++++..+... .+... .. ..+|.|.+++.+|.|.|.|.+
T Consensus 380 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~-----~~---~~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 380 IGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARV-----LP---NGSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp TTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEE-----CT---TSCEEESSCCGGGCEEEEEEE
T ss_pred cCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEE-----cC---CceEEEeccccccCeEEEEEE
Confidence 58999999998 78889999999876422111 01110 00 126999999999999999999
Q ss_pred eCCCcce-eeEEEE
Q psy11826 69 DNPFAID-RRGFRT 81 (83)
Q Consensus 69 ~~~~g~~-~~~~~~ 81 (83)
.+..+.. .....|
T Consensus 452 ~n~~~~~~~~~~~l 465 (581)
T 3o3u_N 452 MNRNGKETKSNYRV 465 (581)
T ss_dssp ECTTSCEEEEEEEE
T ss_pred EcCCCceeEEEEEE
Confidence 9988776 444443
No 409
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.93 E-value=3.2e-09 Score=53.42 Aligned_cols=66 Identities=18% Similarity=0.424 Sum_probs=43.9
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.| .+.+.|+++ +..+.. ..++.... ........|.|.+++.+|
T Consensus 133 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~~L~I~~v~~~D 209 (240)
T 1moe_A 133 PGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITA---DTSSNTAYLQLTSLTSED 209 (240)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEE---ETTTTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEE---cccCCEEEEEECcCCHHH
Confidence 588999999998876 468999985 221110 01111111 011123579999999999
Q ss_pred CeEEEEEeeC
Q psy11826 61 AGYYECVADN 70 (83)
Q Consensus 61 ~g~y~C~~~~ 70 (83)
+|.|.|.+.+
T Consensus 210 ~G~Y~C~a~~ 219 (240)
T 1moe_A 210 TAVYYCAPFG 219 (240)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEEe
Confidence 9999999984
No 410
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.93 E-value=2.2e-09 Score=58.30 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=46.9
Q ss_pred CceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
+..+.|.|.+.+. |.+ .+.|+++|..+............+......+.|.+......|.|.|.|.+.|...
T Consensus 361 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 361 KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred CCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 3459999999884 555 8999999987743211111111112223445678877777789999999998753
No 411
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.93 E-value=5.8e-09 Score=52.78 Aligned_cols=67 Identities=21% Similarity=0.370 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEec------c-----------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELT------F-----------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~------~-----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|++++ .... . ..++..... .......|.|.+++.+|
T Consensus 141 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 217 (247)
T 1svz_A 141 PGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLD---TSTSTAFLQINNLKNED 217 (247)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEe---cCCCEEEEEECCCChhH
Confidence 588999999988774 5689999853 1110 0 111111110 01123579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.|.
T Consensus 218 sG~Y~C~a~n~ 228 (247)
T 1svz_A 218 TATYFCVRDRH 228 (247)
T ss_dssp CEEEEEEEEEG
T ss_pred CEEEEEEEecc
Confidence 99999999884
No 412
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=98.93 E-value=3.7e-08 Score=45.35 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=42.9
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
|+.+++.|.+.|+.++ .+.|.++|..+.........+..+......+.|.+ ..++.+.|.|.+.+..
T Consensus 38 ~~~~tL~C~a~gFyP~~I~v~W~knG~~i~~~~~~~~~~n~dgty~~~s~L~v---~~~~~~~ytC~V~H~s 106 (119)
T 1bii_B 38 GKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEF---TPTETDTYACRVKHDS 106 (119)
T ss_dssp SSCEEEEEEEEEEBSSCCEEEEEETTEECSCCEEEEEEECTTSCEEEEEEEEE---CCCSSCCEEEEEECTT
T ss_pred CCCEEEEEEEEeecCCCeEEEEEECCEECCCEEecceEECCCCeEEEEEEEEE---ecCCCCEEEEEEEcCC
Confidence 5578999999997544 78999999887432222222222223334444544 4567788999998764
No 413
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.93 E-value=3.2e-09 Score=57.59 Aligned_cols=71 Identities=18% Similarity=0.413 Sum_probs=48.5
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+........ . ........+.|.|..+..+| |.|.|.+.|..+..
T Consensus 133 ~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~-~-~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 133 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV-L-QSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASST 205 (434)
T ss_dssp CTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCE-E-CSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTC
T ss_pred CCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCce-e-cCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCc
Confidence 58899999999886 766 8999998864321100000 0 00112234578999999888 99999999988764
No 414
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.93 E-value=6.6e-09 Score=54.74 Aligned_cols=59 Identities=15% Similarity=0.309 Sum_probs=42.8
Q ss_pred CCceEEEEeEeCccC-CCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+++.|.|.+.+.+ .+.+.|.+++..+.... ..... ..+.|.|..+...|+|.|.|..
T Consensus 20 ~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~-~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~ 79 (325)
T 1n26_A 20 PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHP-SRWAG-------MGRRLLLRSVQLHDSGNYSCYR 79 (325)
T ss_dssp TTCCEEEECTTSCTTCCSEEEEEEECSSSSCCC-EEEEE-------ESSEEEECSCCGGGCEEEEEES
T ss_pred CCCcEEEEeCCCCCCCCceEEEEECCccCCccc-ccccc-------ccceEEecccchhhCeEeEEEe
Confidence 689999999987654 78999998776542211 11111 1246999999999999999993
No 415
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.92 E-value=4e-09 Score=52.60 Aligned_cols=69 Identities=16% Similarity=0.325 Sum_probs=45.7
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EE---ec----c------------cceEEEEEEecCCCeEEEEEEEccCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IE---LT----F------------HKYFQVHEWFLGNNTIKSKMEIDPATQ 58 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~---~~----~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 58 (83)
.|+.+.|.|.+.+.+ .+.+.|++.. .. +. . ..++..... . ......|.|.+++.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~~L~I~~v~~ 90 (222)
T 1q9r_B 14 SGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRD--N-SQSILYLQMNTLRA 90 (222)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEE--T-TTTEEEEEECSCCG
T ss_pred CCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEE--C-CCCeEEEEECcCCc
Confidence 689999999988765 6789999742 11 10 0 011221110 0 11245799999999
Q ss_pred CCCeEEEEEeeCCCc
Q psy11826 59 KDAGYYECVADNPFA 73 (83)
Q Consensus 59 ~~~g~y~C~~~~~~g 73 (83)
+|+|.|.|.+.+..+
T Consensus 91 ~D~G~Y~C~~~~~~~ 105 (222)
T 1q9r_B 91 EDSATYYCARDHDGY 105 (222)
T ss_dssp GGCEEEEEEECCCSS
T ss_pred ccCeEEEEEEeccCC
Confidence 999999999988653
No 416
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.92 E-value=2.3e-09 Score=54.30 Aligned_cols=71 Identities=15% Similarity=0.207 Sum_probs=46.4
Q ss_pred CCceEEEEeEeCcc-CC-CeEEEEeCCE-EecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGF-PR-PHITWTKDDI-ELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~-~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.+.|.+.+. |. +.+.|++++. .+......... .........+.|.|..... + |.|.|.+.|..+..
T Consensus 146 ~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 146 LQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTM-KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKN 219 (242)
T ss_dssp SSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCE-ECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGG
T ss_pred cCCCceEEEEEeeEECCCeEEEEEcCCCEeecCcccccee-cCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCC
Confidence 37889999999886 54 6899999886 44322110011 1122233446788877664 4 99999999987754
No 417
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.92 E-value=1.2e-08 Score=51.10 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=46.1
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|++.. ..+. ...++..... .......|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~~D 90 (225)
T 1op3_H 14 AGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRD---DLEDFVYLQMHKMRVED 90 (225)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred CCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEec---CCCCEEEEEECCCChhh
Confidence 589999999988766 6789998742 2110 0011221110 01123579999999999
Q ss_pred CeEEEEEeeCCCc
Q psy11826 61 AGYYECVADNPFA 73 (83)
Q Consensus 61 ~g~y~C~~~~~~g 73 (83)
+|.|.|.+.+..+
T Consensus 91 ~G~Y~C~~~~~~~ 103 (225)
T 1op3_H 91 TAIYYCARKGSDR 103 (225)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998753
No 418
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.92 E-value=3.5e-09 Score=53.25 Aligned_cols=67 Identities=15% Similarity=0.277 Sum_probs=43.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEec---------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELT---------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
.|+.+.|.|. .+.|.+.+.|+++ +.... ...++.+.. ......+|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~~L~I~~v~~~DsG~Y 88 (238)
T 2p1y_A 14 TGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR----PSQENFSLILELATPSQTSVY 88 (238)
T ss_dssp TTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC----CSSSBCEEEESSCCGGGCEEE
T ss_pred CCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc----cCCceEEEEEecCCcccCeeE
Confidence 5899999999 6788899999984 21110 001111110 011134799999999999999
Q ss_pred EEEeeCCCc
Q psy11826 65 ECVADNPFA 73 (83)
Q Consensus 65 ~C~~~~~~g 73 (83)
.|.+.+..+
T Consensus 89 ~C~~~~~~g 97 (238)
T 2p1y_A 89 FCASGDLGQ 97 (238)
T ss_dssp EEEEEC---
T ss_pred EEEEEeCCC
Confidence 999998754
No 419
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.92 E-value=7.9e-09 Score=53.96 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=41.9
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+. .+.+.+.|++++..+....... ..........|.|..++ |+|.|.|.+.|..+
T Consensus 232 ~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~----~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~ 296 (316)
T 3vh8_G 232 AGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAV----RKVNRTFQADFPLGPAT--HGGTYRCFGSFRHS 296 (316)
T ss_dssp TTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECE----ECTTSCEEEEEECC-------CEEEEEEEBTTB
T ss_pred CCCcEEEEEECC-CCCcEEEEEECCCcCCCceece----eccCCceeEEEEcCCcC--CCEEEEEEeecCCC
Confidence 588999999986 4778999999987654321100 01122234679999988 99999999998655
No 420
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.91 E-value=1.3e-09 Score=55.83 Aligned_cols=71 Identities=14% Similarity=0.245 Sum_probs=47.5
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEE------EecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHE------WFLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.+.+++ .+.|+++|..+.......... .........+.|.+......| .|.|.|.+.+...
T Consensus 161 g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 161 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 6789999999886654 799999998775432110000 001122334568888887777 9999999987654
No 421
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.91 E-value=8.2e-09 Score=56.65 Aligned_cols=72 Identities=19% Similarity=0.369 Sum_probs=49.2
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCCEEecccceEEE--EEE---ecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDDIELTFHKYFQV--HEW---FLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
.|+.+.|.|.+.+.++ +.+.|+++|..+........ ... .+......+.|.+......|.|.|.|.+.|...
T Consensus 364 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l 442 (475)
T 1iga_A 364 LNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 442 (475)
T ss_pred cCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCC
Confidence 4777999999988643 48999999988765431111 111 011223456788888888889999999998754
No 422
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.91 E-value=2.7e-08 Score=50.26 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=43.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEe------------ccc----ceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIEL------------TFH----KYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~------------~~~----~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.| ..+.+.+.+.|++ .+... ... .++.... ......+|.|.+++.+|+|.
T Consensus 16 ~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~sL~I~~v~~~D~G~ 90 (245)
T 4ei6_B 16 MGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVER----PDGSYFTLKIQPTALEDSAV 90 (245)
T ss_dssp TTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEEC----CTTSCEEEEECSCCGGGCEE
T ss_pred CCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEe----ccCceEEEEECCCCHhHCEE
Confidence 689999999 6678888999997 11111 000 1111111 11224579999999999999
Q ss_pred EEEEeeC
Q psy11826 64 YECVADN 70 (83)
Q Consensus 64 y~C~~~~ 70 (83)
|.|.+.+
T Consensus 91 Y~C~~~~ 97 (245)
T 4ei6_B 91 YFCASSF 97 (245)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 9999985
No 423
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=1.8e-09 Score=53.46 Aligned_cols=64 Identities=17% Similarity=0.445 Sum_probs=44.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.|.+.+.|+++ +..+. ...++.... ......|.|.+++.+|+|.|.|.
T Consensus 13 ~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 13 VGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-----SGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp TTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-----ETTEEEEEETTCCGGGCSEEEEE
T ss_pred CCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-----eCCEEEEEECcCCcccCEEEEEE
Confidence 588999999988888888999873 32221 011222111 01134799999999999999999
Q ss_pred eeC
Q psy11826 68 ADN 70 (83)
Q Consensus 68 ~~~ 70 (83)
+.|
T Consensus 88 ~~n 90 (212)
T 1nfd_E 88 SSY 90 (212)
T ss_dssp EEE
T ss_pred EEc
Confidence 985
No 424
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=6.3e-09 Score=52.13 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=45.2
Q ss_pred CCceEEEEeEeCccCC-C-eEEEEeCC--EEe---c---------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGFPR-P-HITWTKDD--IEL---T---------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~-~-~~~w~~~~--~~~---~---------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
.|+.+.|.|.+.+.+. + .+.|++++ ..+ . ...++.... ......|.|.+++.+|+|.|.
T Consensus 33 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~ 107 (234)
T 2j6e_L 33 PGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-----SGTSASLAISGLRSEDEADYY 107 (234)
T ss_dssp TTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-----ETTEEEEEEESCCSTTCSEEE
T ss_pred CCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-----cCCeEEEEECCCCHHHCEEEE
Confidence 6899999999887543 4 69999753 211 0 011222111 011347999999999999999
Q ss_pred EEeeCCCc
Q psy11826 66 CVADNPFA 73 (83)
Q Consensus 66 C~~~~~~g 73 (83)
|.+.+..+
T Consensus 108 C~~~~~~~ 115 (234)
T 2j6e_L 108 CATWDDSL 115 (234)
T ss_dssp EEEEETTT
T ss_pred EEEEcCCc
Confidence 99998766
No 425
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.91 E-value=6.5e-10 Score=55.74 Aligned_cols=67 Identities=15% Similarity=0.302 Sum_probs=37.5
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEe---cc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IEL---TF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~---~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.+.|.|.+.+.+.+.+.|++++ ... .. ..++.. ........|.|.+++.+|+|.|.|.
T Consensus 37 ~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-----~~~~~~~~L~I~~v~~~D~G~Y~C~ 111 (233)
T 3bqu_C 37 IGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSS-----SGYGTDFVFTIENMLSEDVADYYCL 111 (233)
T ss_dssp ----CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCC-----CEEEEEEEEC-----CCCCSEEEEE
T ss_pred cCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEe-----eccCCEEEEEECCCCHHHCEEEEEE
Confidence 5888999999888888889998743 111 00 001000 0012234799999999999999999
Q ss_pred eeCCCc
Q psy11826 68 ADNPFA 73 (83)
Q Consensus 68 ~~~~~g 73 (83)
+.+..+
T Consensus 112 ~~~~~~ 117 (233)
T 3bqu_C 112 QSDNLP 117 (233)
T ss_dssp ECSSSS
T ss_pred EecCCc
Confidence 987654
No 426
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.91 E-value=1.8e-08 Score=51.32 Aligned_cols=67 Identities=18% Similarity=0.392 Sum_probs=44.3
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeC--CEEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKD--DIELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~--~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+.+ .+.+.|++. +..+.. ..++..... .......|.|.+++.+|
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 16 PGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVD---KSSSTAYLELRSLTSED 92 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEe---cCCCEEEEEECCCCccc
Confidence 689999999988765 678999872 211100 011111110 11123469999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 93 sG~Y~C~~~~~ 103 (256)
T 3umt_A 93 SAVYYCARDDR 103 (256)
T ss_dssp CEEEEEEECCS
T ss_pred CEEEEEEEccC
Confidence 99999999886
No 427
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.91 E-value=7.8e-09 Score=51.49 Aligned_cols=69 Identities=16% Similarity=0.405 Sum_probs=45.9
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeCC--EE---ecc----------------cceEEEEEEecCCCeEEEEEEEccCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKDD--IE---LTF----------------HKYFQVHEWFLGNNTIKSKMEIDPAT 57 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~~--~~---~~~----------------~~~~~~~~~~~~~~~~~~~l~i~~~~ 57 (83)
..|+.+.|.|.+.+.+ .+.+.|++.+ .. +.. ..++..... .......|.|.+++
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~ 89 (220)
T 1pz5_B 13 QPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRD---DSKSSVYLQMNNLR 89 (220)
T ss_dssp CTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEE---GGGTEEEEEECSCC
T ss_pred cCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEe---CCCCeEEEEEccCC
Confidence 3689999999988765 6889999742 11 100 011221110 01123479999999
Q ss_pred CCCCeEEEEEeeCCC
Q psy11826 58 QKDAGYYECVADNPF 72 (83)
Q Consensus 58 ~~~~g~y~C~~~~~~ 72 (83)
.+|+|.|.|.+.+..
T Consensus 90 ~~D~G~Y~C~~~~~~ 104 (220)
T 1pz5_B 90 AEDTGIYYCTRGGAV 104 (220)
T ss_dssp GGGCEEEEEEEECTT
T ss_pred HHHCEEEEEEEecCC
Confidence 999999999999864
No 428
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=1.5e-08 Score=51.59 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.++|.|.+.+ +.+.+.|++++..+..... ..........|.|.+++.+|+|.|.|.+.+..
T Consensus 20 ~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~------~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 20 KEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP------KPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEETTEEEEEECC------SSCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEEEeeCC-CCcEEEEEECCCccccccc------cccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 5899999999764 4567899999876542100 00011124579999999999999999997653
No 429
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=5.5e-09 Score=53.20 Aligned_cols=61 Identities=18% Similarity=0.443 Sum_probs=45.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.++|.|.+.+. .+.+.|++++..+.... . . ......|.|.+++.+|+|.|.|.+.+..
T Consensus 115 ~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~--~----~---~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 115 SGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQR--G----Y---GKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp TTCEEEEEEECTTS-CSEEEEEECSSSCEEEE--E----E---CSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred CCCcEEEEEecCCC-CCEEEEEECCCccCccc--c----C---CCceEEEEeCCCccccCEEEEEEEECCC
Confidence 58999999997654 45899999986554310 0 0 1114579999999999999999998753
No 430
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.91 E-value=1.4e-09 Score=46.66 Aligned_cols=61 Identities=13% Similarity=0.400 Sum_probs=38.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFRT 81 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 81 (83)
.|+.+.|.| .+.+.|++++..+..... .+|.|.+....+.|.|.|.+.+..+...+.+.|
T Consensus 8 ~g~~V~LtC------~~~i~W~k~~~~i~~~~~--------------~tL~L~~~~~d~sG~Y~C~~~~~~~~~~s~LqV 67 (79)
T 1xiw_B 8 LEDRVFVNC------NTSITWVEGTVGTLLSDI--------------TRLDLGKRILDPRGIYRCNGTDIYKDKESTVQV 67 (79)
T ss_dssp ETTEEEEEC------SSCEEEEEECCCEEEGGG--------------TEEEEEEGGGCCEEEEEEC--------CEEEEE
T ss_pred CCCEEEEEc------CCCEEEEECCcccccccC--------------CeEEeccCcCCCCeEEEecCCCCCCcccEEEEE
Confidence 478899999 566999998876543211 257777777778999999988887765555554
Q ss_pred e
Q psy11826 82 D 82 (83)
Q Consensus 82 ~ 82 (83)
.
T Consensus 68 ~ 68 (79)
T 1xiw_B 68 H 68 (79)
T ss_dssp E
T ss_pred E
Confidence 3
No 431
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.90 E-value=7.8e-10 Score=59.96 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=47.9
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
.|+.+.|.|.+.+.++ +.+.|+++|..+............++.....+.|.+......|.|.|.|.+.|....
T Consensus 350 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 350 AKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred cCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 4667999999988543 379999999876432111000011112234467888887778899999999987543
No 432
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.90 E-value=1e-08 Score=50.90 Aligned_cols=68 Identities=15% Similarity=0.213 Sum_probs=44.8
Q ss_pred CCCceEEEEeEeC-ccC-CCeEEEEeCC--EEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 1 MLGRKITFFCMAE-GFP-RPHITWTKDD--IELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 1 ~~g~~~~~~C~~~-~~~-~~~~~w~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
..|+.+.|.|.+. +.+ .+.+.|++++ ..+. ...++.... ......|.|.+++.+|+|.|
T Consensus 13 ~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 13 APGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-----SGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp CTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-----ETTEEEEEECSCCGGGCEEE
T ss_pred cCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-----cCCEEEEEECCCCcccCEEE
Confidence 3689999999954 332 5789999843 1110 011222111 11134799999999999999
Q ss_pred EEEeeCCCc
Q psy11826 65 ECVADNPFA 73 (83)
Q Consensus 65 ~C~~~~~~g 73 (83)
.|.+.+..+
T Consensus 88 ~C~~~~~~~ 96 (216)
T 2xzc_L 88 YCGTWDSSL 96 (216)
T ss_dssp EEEEECTTS
T ss_pred EEEEEeCCC
Confidence 999998765
No 433
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.43 E-value=1.5e-10 Score=52.44 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=44.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCE--Eeccc---ce----EEEEEEecCC--CeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDI--ELTFH---KY----FQVHEWFLGN--NTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~--~~~~~---~~----~~~~~~~~~~--~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|...+.+.+.+.|++... ..... .. .......... ......|.|.+++.+|+|.|.|.+.+
T Consensus 13 ~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 92 (110)
T 1u3h_A 13 EGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAASA 92 (110)
Confidence 58899999998777778899998532 11100 00 0000000010 22235799999999999999999886
Q ss_pred C
Q psy11826 71 P 71 (83)
Q Consensus 71 ~ 71 (83)
.
T Consensus 93 ~ 93 (110)
T 1u3h_A 93 N 93 (110)
Confidence 4
No 434
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.90 E-value=2.4e-08 Score=45.51 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=43.4
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCC--E--E-ec-----c-----cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDD--I--E-LT-----F-----HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~--~--~-~~-----~-----~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
+|+.+.|.|...+. +.+.+.|++.. . . +. . ..++.... ........|.|.+++.+|+|.|.
T Consensus 14 ~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~---~~~~~~~~L~I~~~~~~DsG~Y~ 90 (116)
T 1fo0_A 14 EKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNF---QKPKSSIGLIITATQIEDSAVYF 90 (116)
T ss_dssp TTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEE---EGGGTEEEEEECSCCGGGCEEEE
T ss_pred cCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEE---eCCCCEEEEEECCCChhhCEEEE
Confidence 58999999998766 55689998732 1 1 10 0 01111110 11122457999999999999999
Q ss_pred EEeeC
Q psy11826 66 CVADN 70 (83)
Q Consensus 66 C~~~~ 70 (83)
|.+.+
T Consensus 91 C~~~~ 95 (116)
T 1fo0_A 91 CAMRG 95 (116)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99986
No 435
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.90 E-value=2.1e-08 Score=49.91 Aligned_cols=69 Identities=13% Similarity=0.440 Sum_probs=45.6
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeCC--EEec----------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKDD--IELT----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
..|+.+.|.|.+.+.+ .+.+.|++.. .... ...++..... ......+|.|.+++.+|
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 13 QPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRD---TSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEE---TTTTEEEEEESSCCGGG
T ss_pred cCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEee---CCCceEEEEECCCCccc
Confidence 3689999999988764 5789999742 1110 0112222111 11124579999999999
Q ss_pred CeEEEEEeeCCC
Q psy11826 61 AGYYECVADNPF 72 (83)
Q Consensus 61 ~g~y~C~~~~~~ 72 (83)
+|.|.|.+.+..
T Consensus 90 ~G~Y~C~~~~~~ 101 (215)
T 1c5d_H 90 TAIYFCTREDGW 101 (215)
T ss_dssp CEEEEEEECCSS
T ss_pred CEEEEEEEecCC
Confidence 999999998763
No 436
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.89 E-value=6.6e-09 Score=52.89 Aligned_cols=67 Identities=16% Similarity=0.386 Sum_probs=44.3
Q ss_pred CCceEEEEeEeCc--cCCCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEG--FPRPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~--~~~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+ .+.+.+.|++.. ..... ..++.+.. .......+|.|.+++.+|
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~~~L~I~~v~~~D 96 (256)
T 3juy_B 20 PGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTA---DTSANTAYMELRSLRSAD 96 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEE---ETTTTEEEEEECSCCGGG
T ss_pred CCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEE---ecCCCEEEEEECCCCccc
Confidence 6899999999877 367889999632 11100 01121111 011123469999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 97 sG~Y~C~~~~~ 107 (256)
T 3juy_B 97 TAVYYCARVGE 107 (256)
T ss_dssp CEEEEEEECCC
T ss_pred CEEEEEeEEec
Confidence 99999999886
No 437
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.89 E-value=6e-09 Score=53.05 Aligned_cols=66 Identities=21% Similarity=0.349 Sum_probs=45.2
Q ss_pred CCceEEEEeEeCccCCC-eEEEEeC--CEEecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEE
Q psy11826 2 LGRKITFFCMAEGFPRP-HITWTKD--DIELTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~-~~~w~~~--~~~~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C 66 (83)
.|+.+.|.|.+.+.+.+ .+.|++. +..... ..++.... ......|.|.+++.+|+|.|.|
T Consensus 155 ~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C 229 (257)
T 3gkz_A 155 PGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSG-----SGTSYSLTISSMEAEDAASYFC 229 (257)
T ss_dssp TTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEec-----CCCEEEEEECCCChHHCEEEEE
Confidence 58899999999988877 8999973 221110 01111110 0113469999999999999999
Q ss_pred EeeCCC
Q psy11826 67 VADNPF 72 (83)
Q Consensus 67 ~~~~~~ 72 (83)
.+.+..
T Consensus 230 ~~~~~~ 235 (257)
T 3gkz_A 230 HQWSSF 235 (257)
T ss_dssp EECSSS
T ss_pred EEccCC
Confidence 998743
No 438
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=98.89 E-value=4.4e-08 Score=45.15 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=43.3
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EE----ecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IE----LTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADN 70 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~ 70 (83)
+|+.+.|.|...+. +.+.+.|++.. .. +....++..... .......|.|.+++.+|+|.|.|.+..
T Consensus 14 ~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (121)
T 2i24_N 14 TGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVN---RGSKSFSLRINDLTVKDSGTYRCKPES 87 (121)
T ss_dssp TTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEE---TTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEec---CCCCEEEEEECCCChhhCEEEEEEEec
Confidence 68999999998764 34679999742 21 111122222111 111246799999999999999999863
No 439
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.88 E-value=8.4e-08 Score=48.53 Aligned_cols=67 Identities=18% Similarity=0.379 Sum_probs=45.9
Q ss_pred CCceEEEEeEeCccC-----CCeEEEEeCC--E--E-ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFP-----RPHITWTKDD--I--E-LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-----~~~~~w~~~~--~--~-~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
.|+.+.|.|.+.+.+ .+.+.|++.. . . +.. ..++.... ......|.|.+++.+|+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~G 89 (247)
T 1svz_A 15 LGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-----SGTDFTLKISRVEAEDLG 89 (247)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCE
T ss_pred CCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-----CCCEEEEEECCCCHHHCE
Confidence 689999999998887 6889999732 1 1 100 11121110 011347999999999999
Q ss_pred EEEEEeeCCCc
Q psy11826 63 YYECVADNPFA 73 (83)
Q Consensus 63 ~y~C~~~~~~g 73 (83)
.|.|.+.+..+
T Consensus 90 ~Y~C~~~n~~~ 100 (247)
T 1svz_A 90 IYYCFQGSHFP 100 (247)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEccCCc
Confidence 99999988644
No 440
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.88 E-value=1.5e-08 Score=51.95 Aligned_cols=67 Identities=19% Similarity=0.384 Sum_probs=44.9
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCC--EE---ec----c----------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDD--IE---LT----F----------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~--~~---~~----~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+. +.+.|++.. .. +. . ..+..+.. ........|.|.+++.+|
T Consensus 152 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~~L~I~~v~~~D 228 (264)
T 2gjj_A 152 TGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTV---DTSSSTAFMQLNSLTSED 228 (264)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEE---ETTTTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEE---cCCCCEEEEEECcCCccc
Confidence 5889999999887764 789999853 21 10 0 01111111 011124579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.|.
T Consensus 229 sG~Y~C~a~n~ 239 (264)
T 2gjj_A 229 SADYYCVRSGN 239 (264)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEecC
Confidence 99999999885
No 441
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.88 E-value=2.5e-09 Score=54.81 Aligned_cols=71 Identities=14% Similarity=0.291 Sum_probs=47.9
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEE--E----EecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVH--E----WFLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+ .|.| .+.|+++|..+......... . .........+.|.+......| .|.|.|.+.+...
T Consensus 164 g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 164 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred CCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 678999999888 5666 78999999888653211000 0 001122334578888887777 8999999987654
No 442
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.88 E-value=4.7e-09 Score=52.87 Aligned_cols=69 Identities=13% Similarity=0.174 Sum_probs=45.1
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEe-CCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcc
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTK-DDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAI 74 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~ 74 (83)
|+.+.+.|.+.+. |. +.+.|++ ++..+......... ..+......+.|.|..... + |.|.|.+.+....
T Consensus 145 g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 145 HKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTL-KTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp HSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCE-EETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred CCcceEEEEEeeecCCCeEEEEEccCCeEccccccceee-cCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 5678999998876 65 5899999 77655432111111 1112223346788887775 4 8999999987664
No 443
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.88 E-value=4.1e-09 Score=54.15 Aligned_cols=71 Identities=21% Similarity=0.448 Sum_probs=47.0
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+......... ........+.|.|......| |.|.|.+.|.....
T Consensus 143 ~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 143 TGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEE--ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCcee--cCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 47889999998875 766 89999987654321100000 01112234679998888877 99999999866543
No 444
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.87 E-value=1.1e-08 Score=46.10 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=44.0
Q ss_pred CCceEEEEeEe-CccCCCeEEEEeCC-EEecc---cceEEEEEEec-CCCe---EEEEEEEccCCCCCCeEEEEEeeCCC
Q psy11826 2 LGRKITFFCMA-EGFPRPHITWTKDD-IELTF---HKYFQVHEWFL-GNNT---IKSKMEIDPATQKDAGYYECVADNPF 72 (83)
Q Consensus 2 ~g~~~~~~C~~-~~~~~~~~~w~~~~-~~~~~---~~~~~~~~~~~-~~~~---~~~~l~i~~~~~~~~g~y~C~~~~~~ 72 (83)
.|+.+.|.|.. .+.+.+.+.|++.. ..+.. ........... .... ...+|.|.+++.+|+|.|.|.+.+..
T Consensus 17 ~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~ 96 (110)
T 2ptt_A 17 TGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGTYYMRVLRET 96 (110)
T ss_dssp TTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEEEEEEEESSS
T ss_pred cCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeEEEEEEEcCC
Confidence 58999999997 66777899999832 21110 00000000000 0000 12469999999999999999998755
No 445
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.87 E-value=7.5e-10 Score=56.83 Aligned_cols=73 Identities=15% Similarity=0.358 Sum_probs=36.9
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCccee
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDR 76 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~ 76 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+........ ...+......+.|.|..+...| |.|.|.+.|......
T Consensus 147 ~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~-~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 147 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV-LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp ------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCE-ECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred CCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCe-EcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 46778999998885 777 8999998865322110000 0011122334568888777777 999999998765433
No 446
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.87 E-value=2.2e-08 Score=51.45 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|++++|.|.+.+ +.+.+.|++++..+..... .. ..........|.|.+++.+|+|.|.|.+.+.
T Consensus 20 ~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~---~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 84 (257)
T 1b6u_A 20 SEETVILQCWSDV-RFQHFLLHREGKFKDTLHL---IG-EHHDGVSKANFSIGPMMQDLAGTYRCYGSVT 84 (257)
T ss_dssp SSCCEEEEEEESS-CCSEEEEEEESTTCEEEEE---EC-BCCTTCEEEEEEECSCCTTTCEEEEEEEECS
T ss_pred CCCCEEEEEecCC-CCcEEEEEECCCCCCccee---ee-eccCCCceEEEEeecCCcccCEEEEEeEecc
Confidence 5899999999864 4678999998754321100 00 0011123467999999999999999998753
No 447
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.87 E-value=1.7e-08 Score=50.66 Aligned_cols=70 Identities=14% Similarity=0.311 Sum_probs=46.3
Q ss_pred CCCceEEEEeEeCccCC----CeEEEEeC--CEEec----------------ccceEEEEEEecCCCeEEEEEEEccCCC
Q psy11826 1 MLGRKITFFCMAEGFPR----PHITWTKD--DIELT----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQ 58 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~~----~~~~w~~~--~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 58 (83)
..|+.+.|.|.+.+.+. +.+.|++. +..+. ...++..... . ......|.|.+++.
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 13 KPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKD--T-SRDMVFMKITSVDT 89 (228)
T ss_dssp CTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEE--T-TTTEEEEEECSCCG
T ss_pred cCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEc--C-CCCeEEEEEcCCCc
Confidence 36899999999988764 78999873 22110 0112221110 0 11235799999999
Q ss_pred CCCeEEEEEeeCCCc
Q psy11826 59 KDAGYYECVADNPFA 73 (83)
Q Consensus 59 ~~~g~y~C~~~~~~g 73 (83)
+|+|.|.|.+.+..|
T Consensus 90 ~D~G~Y~C~~~~~~g 104 (228)
T 3bae_H 90 ADTATYYCARRGFYG 104 (228)
T ss_dssp GGCEEEEEEEEEEST
T ss_pred ccCEEEEEEEecCCC
Confidence 999999999987653
No 448
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.86 E-value=3.8e-09 Score=53.34 Aligned_cols=71 Identities=15% Similarity=0.292 Sum_probs=47.5
Q ss_pred CceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEE------ecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEW------FLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+. |.+ .+.|+++|..+........... ........+.|.|......| .|.|.|.+.+...
T Consensus 139 g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 139 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 6789999998884 444 7999999988765322110000 01122334568888888778 8999999987543
No 449
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.86 E-value=9.1e-10 Score=56.64 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=46.2
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeC-CEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcce
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKD-DIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAID 75 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~ 75 (83)
.|+.+.|.|.+.+ |. +.+.|+++ +..+......... . ...|.|.+++.+|.|.|.|.+.|..+..
T Consensus 103 ~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~----~----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 170 (292)
T 4dkd_C 103 EDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFS----P----WHGFTIHRAKFIQSQDYQCSALMGGRKV 170 (292)
T ss_dssp TTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECC----S----SSCCEETTCCGGGCSEEEEEECSTTSCE
T ss_pred CCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccccc----C----CceEEECCCCHHHCeEEEEEEEeCCCce
Confidence 5888999999887 44 78999986 4444333222110 0 1238999999999999999999876644
No 450
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.86 E-value=1.9e-08 Score=46.49 Aligned_cols=66 Identities=24% Similarity=0.391 Sum_probs=44.4
Q ss_pred CCceEEEEeEeCccC----CCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFP----RPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~----~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.++|.|...+.+ .+.+.|++.. .. +.. ..++.... ......|.|.+++.+|+|.
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~sL~I~~v~~~DsG~ 89 (126)
T 4ffy_L 15 LGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSG-----SETDFTLTIDSVETDDAAT 89 (126)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCEE
T ss_pred CCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec-----CCCEEEEEECCCCHHHCEE
Confidence 589999999988776 5679999732 11 110 11222110 1123579999999999999
Q ss_pred EEEEeeCCC
Q psy11826 64 YECVADNPF 72 (83)
Q Consensus 64 y~C~~~~~~ 72 (83)
|.|.+.+..
T Consensus 90 Y~C~~~~~~ 98 (126)
T 4ffy_L 90 YYCQQNNED 98 (126)
T ss_dssp EEEEECSSS
T ss_pred EEEEEecCC
Confidence 999998753
No 451
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.85 E-value=1.4e-08 Score=50.98 Aligned_cols=68 Identities=19% Similarity=0.361 Sum_probs=45.3
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 59 (83)
.+|+.+.|.|.+.+.+ .+.+.|++.. ..+.. ..++.... +. .....+|.|.+++.+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~--~~-~~~~~sL~I~~v~~~ 89 (227)
T 1mju_H 13 KPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTV--DT-SSSTAYMQLSSLTSD 89 (227)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEE--ET-TTTEEEEEECSCCGG
T ss_pred cCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEE--eC-CCCeEEEEECCCCcc
Confidence 3689999999988776 6789999743 21100 01111111 00 112457999999999
Q ss_pred CCeEEEEEeeCC
Q psy11826 60 DAGYYECVADNP 71 (83)
Q Consensus 60 ~~g~y~C~~~~~ 71 (83)
|+|.|.|.+.+.
T Consensus 90 D~G~Y~C~~~~~ 101 (227)
T 1mju_H 90 DSAVYYCANKLG 101 (227)
T ss_dssp GCEEEEEEEEET
T ss_pred cCEEEEEEECCC
Confidence 999999999875
No 452
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.85 E-value=3.5e-09 Score=54.64 Aligned_cols=66 Identities=18% Similarity=0.382 Sum_probs=45.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEec-----------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IELT-----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
+|+.+.|.|.+.+.+.+.+.|++.+ .... ...++.... . .....+|.|.+++.+|+|
T Consensus 38 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~-~~~~~sL~I~~v~~~D~G 113 (279)
T 2wbj_D 38 SGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINH---A-SLTLSTLTVTSAHPEDSS 113 (279)
T ss_dssp TTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEE---C-SSSEEEEEESSCCGGGCE
T ss_pred CCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEe---C-CCCEEEEEEccCCccCCE
Confidence 5889999999988888899999853 1100 001121111 0 122457999999999999
Q ss_pred EEEEEeeCC
Q psy11826 63 YYECVADNP 71 (83)
Q Consensus 63 ~y~C~~~~~ 71 (83)
.|.|.+.+.
T Consensus 114 ~Y~C~~~~~ 122 (279)
T 2wbj_D 114 FYICSARDL 122 (279)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEccc
Confidence 999999883
No 453
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.85 E-value=2.7e-08 Score=45.19 Aligned_cols=65 Identities=17% Similarity=0.316 Sum_probs=43.7
Q ss_pred CCceEEEEeEeCccC------CCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP------RPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~------~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.+.|.|...+.+ .+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~Ds 89 (114)
T 1eeq_A 15 LGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG-----SGTDFTLTISSLQAEDV 89 (114)
T ss_dssp TTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGC
T ss_pred CCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee-----cCCEEEEEECCCCcccC
Confidence 689999999987766 3679999742 1 1110 11121111 11134799999999999
Q ss_pred eEEEEEeeCC
Q psy11826 62 GYYECVADNP 71 (83)
Q Consensus 62 g~y~C~~~~~ 71 (83)
|.|.|.+.+.
T Consensus 90 G~Y~C~~~~~ 99 (114)
T 1eeq_A 90 AVYYCQQYYS 99 (114)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999875
No 454
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=98.85 E-value=2e-07 Score=42.20 Aligned_cols=69 Identities=13% Similarity=0.279 Sum_probs=42.7
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CE--E-ec---ccceEEE-----EEEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DI--E-LT---FHKYFQV-----HEWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~--~-~~---~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
+|+.++|.|.....+.+.+.|++. +. . +. ....... ..+........ .|.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~~~Dsg~Y~C~~ 93 (112)
T 1fo0_B 15 RGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVANMSQGRTLYCTC 93 (112)
T ss_dssp TTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEESCCSCEEEEEEE
T ss_pred cCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCCHhHCEEEEEEE
Confidence 689999999987666778999973 22 1 11 0000000 00000000011 6999999999999999998
Q ss_pred eCC
Q psy11826 69 DNP 71 (83)
Q Consensus 69 ~~~ 71 (83)
.+.
T Consensus 94 ~~~ 96 (112)
T 1fo0_B 94 SAD 96 (112)
T ss_dssp ESS
T ss_pred EcC
Confidence 764
No 455
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.85 E-value=2.9e-10 Score=56.54 Aligned_cols=71 Identities=13% Similarity=0.229 Sum_probs=44.7
Q ss_pred CCCceEEEEeEeCccCC-----CeEEEEeCCEEecc---cceEEEEEEecCC--------CeEEEEEEEccCCCCCCeEE
Q psy11826 1 MLGRKITFFCMAEGFPR-----PHITWTKDDIELTF---HKYFQVHEWFLGN--------NTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~~-----~~~~w~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~l~i~~~~~~~~g~y 64 (83)
.+|+.+.|.|.+.+.+. +.+.|++++..... ............. .....+|.|.+++.+|.|.|
T Consensus 8 ~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 87 (222)
T 4i0k_A 8 LVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSY 87 (222)
T ss_dssp CTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCE
T ss_pred ECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEE
Confidence 36899999999877654 68999987633210 0000000000000 01134699999999999999
Q ss_pred EEEeeCC
Q psy11826 65 ECVADNP 71 (83)
Q Consensus 65 ~C~~~~~ 71 (83)
.|.+.+.
T Consensus 88 ~C~~~~~ 94 (222)
T 4i0k_A 88 TCFVSIQ 94 (222)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999864
No 456
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=98.85 E-value=4.2e-08 Score=43.83 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=42.0
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.|+.++ .+.|.++|..+............+......+.|.+ ..++.+.|.|.+.+...
T Consensus 19 ~~~~~L~C~~~gFyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l~v---~~~~~~~ytC~V~H~~l 88 (100)
T 1k5n_B 19 GKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEF---TPTEKDEYACRVNHVTL 88 (100)
T ss_dssp TSCEEEEEEEEEEBSSCCEEEEEETTEECTTCEECCCEECTTSCEEEEEEEEE---CCCSSCCEEEEEECTTC
T ss_pred CCcEEEEEEEEeeECCceEEEEEECCEECCCcccCceEECCCCcEEEEEEEEE---cCCCCCEEEEEEEcCCC
Confidence 4578999999996544 78999999887432111111111222333445554 45667889999987643
No 457
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.84 E-value=4e-08 Score=46.71 Aligned_cols=65 Identities=18% Similarity=0.238 Sum_probs=44.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.++|.|...+.+.+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 30 ~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-----~~~~~sL~I~~v~~~DsG~Y~C~ 104 (146)
T 2yc1_B 30 PGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG-----SGTDFTLTISSLEPEDFAIYYCQ 104 (146)
T ss_dssp TTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGCSEEEEE
T ss_pred cCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec-----CCCEEEEEECCCCHHHCEEEEEE
Confidence 6899999999887777889999743 1 1110 01121110 01134799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 105 ~~~~ 108 (146)
T 2yc1_B 105 QYRY 108 (146)
T ss_dssp ECSS
T ss_pred EecC
Confidence 9764
No 458
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.84 E-value=1.1e-08 Score=52.05 Aligned_cols=66 Identities=14% Similarity=0.266 Sum_probs=45.2
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EEec------------ccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IELT------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
+|+.+.|.|.+.+. +.+.+.|++.. .... ...++.... ......|.|.+++.+|+|.|.
T Consensus 16 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 16 PGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK-----SGTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp TTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-----ETTEEEEEECSCCGGGCEEEE
T ss_pred CCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc-----cCCEEEEEECCCChhhCEEEE
Confidence 68999999998876 77899999732 1110 011222111 011347999999999999999
Q ss_pred EEeeCCC
Q psy11826 66 CVADNPF 72 (83)
Q Consensus 66 C~~~~~~ 72 (83)
|.+.+..
T Consensus 91 C~~~~~~ 97 (256)
T 3ux9_B 91 CQVRDNN 97 (256)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9998754
No 459
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.84 E-value=2.6e-08 Score=51.15 Aligned_cols=68 Identities=16% Similarity=0.314 Sum_probs=45.3
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+.+ .+.+.|++.. ..+.. ..++.+... . ......|.|.+++.+|
T Consensus 20 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~--~-~~~~~sL~I~~v~~~D 96 (261)
T 2xqy_G 20 PGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVD--K-SSSTVYIQLSSLTSED 96 (261)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEE--G-GGTEEEEEECSCCGGG
T ss_pred CCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEec--C-CCCEEEEEEcCCCccc
Confidence 689999999988766 6789999752 21100 011111110 0 1123579999999999
Q ss_pred CeEEEEEeeCCC
Q psy11826 61 AGYYECVADNPF 72 (83)
Q Consensus 61 ~g~y~C~~~~~~ 72 (83)
+|.|.|.+.+..
T Consensus 97 sG~Y~C~~~~~~ 108 (261)
T 2xqy_G 97 SAVYYCGRLGYV 108 (261)
T ss_dssp CEEEEEEEECTT
T ss_pred CeEEEEEEecCC
Confidence 999999998853
No 460
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.84 E-value=3.3e-08 Score=50.71 Aligned_cols=67 Identities=16% Similarity=0.416 Sum_probs=43.8
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeC--CEEec-------------------ccceEEEEEEecCCCeEEEEEEEccCCC
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKD--DIELT-------------------FHKYFQVHEWFLGNNTIKSKMEIDPATQ 58 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~--~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 58 (83)
.|+.+.|.|.+.+.+. +.+.|++. +..+. ...++..... .......|.|.+++.
T Consensus 165 ~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~I~~v~~ 241 (268)
T 1x9q_A 165 PGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRD---DSKSSVYLQMNNLRV 241 (268)
T ss_dssp TTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEE---GGGTEEEEEECSCCG
T ss_pred CCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEe---CCCCEEEEEECCCCH
Confidence 5889999999887653 78999874 22111 0111111110 011135799999999
Q ss_pred CCCeEEEEEeeCC
Q psy11826 59 KDAGYYECVADNP 71 (83)
Q Consensus 59 ~~~g~y~C~~~~~ 71 (83)
+|+|.|.|.+.+.
T Consensus 242 ~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 242 EDTGIYYCTGASY 254 (268)
T ss_dssp GGCEEEEEEEEET
T ss_pred HHCEEEEEEEccC
Confidence 9999999999764
No 461
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=3.2e-09 Score=49.63 Aligned_cols=71 Identities=23% Similarity=0.268 Sum_probs=44.0
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCCEE----ecccceEEEEEEec-----CCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDDIE----LTFHKYFQVHEWFL-----GNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~~~----~~~~~~~~~~~~~~-----~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
+|+.+.|.|...+. +.+.+.|++.+.. +............. ........|.|.+++.+|+|.|.|.+.+.
T Consensus 22 ~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 101 (136)
T 2d9c_A 22 AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRK 101 (136)
T ss_dssp TTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 58999999998765 5678999996511 10000000000000 00111457999999999999999998764
Q ss_pred C
Q psy11826 72 F 72 (83)
Q Consensus 72 ~ 72 (83)
.
T Consensus 102 ~ 102 (136)
T 2d9c_A 102 G 102 (136)
T ss_dssp C
T ss_pred C
Confidence 3
No 462
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.84 E-value=7.4e-09 Score=47.43 Aligned_cols=73 Identities=19% Similarity=0.310 Sum_probs=41.6
Q ss_pred CCceEEEEeEeCc----cCCCeEEEEeCCEE------ec-ccceEEEE----------EEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEG----FPRPHITWTKDDIE------LT-FHKYFQVH----------EWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~----~~~~~~~w~~~~~~------~~-~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.... .+.+.+.|++.+.. +. ........ ...........+|.|.+++.+|
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 92 (124)
T 1neu_A 13 VGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSD 92 (124)
T ss_dssp TTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGGG
T ss_pred eCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChhh
Confidence 5899999999743 24678999974320 10 00000000 0000000112479999999999
Q ss_pred CeEEEEEeeCCCcc
Q psy11826 61 AGYYECVADNPFAI 74 (83)
Q Consensus 61 ~g~y~C~~~~~~g~ 74 (83)
+|.|.|.+.+..+.
T Consensus 93 ~G~Y~C~v~~~~~~ 106 (124)
T 1neu_A 93 NGTFTCDVKNPPDI 106 (124)
T ss_dssp CEEEEEEEEC----
T ss_pred CEEEEEEEEcCCCC
Confidence 99999999987654
No 463
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.83 E-value=1.9e-08 Score=51.71 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=43.0
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
.|+.++|.|.+.+. .+.+.|++++..+........ .........|.|.+++ |.|.|.|.+.+.
T Consensus 120 ~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~----~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 120 AGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGP----KVNGTFQADFPLGPAT--HGGTYRCFGSFR 182 (257)
T ss_dssp TTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBC----CSSSCCBEEEEEEECC--SCEEEEEEEECS
T ss_pred CCCEEEEEEeCCCC-CcEEEEEECCcccCccccccc----ccCCceeEEEEecccc--cCEEEEEEEEcC
Confidence 58999999998765 468999999875543211000 0001113578888988 999999999864
No 464
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.83 E-value=2.2e-08 Score=45.55 Aligned_cols=67 Identities=18% Similarity=0.435 Sum_probs=43.1
Q ss_pred CCceEEEEeEeCcc-CCCeEEEEeCC--E--E-ecc------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGF-PRPHITWTKDD--I--E-LTF------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~~~~w~~~~--~--~-~~~------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
+|+.+.|.|..... +.+.+.|++.. . . +.. ..++..... .......|.|.+++.+|+|.
T Consensus 14 ~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~~~~~DsG~ 90 (116)
T 1tvd_A 14 SGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHI---LTQKAFHLVISPVRTEDSAT 90 (116)
T ss_dssp TTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEE---GGGTEEEEEESSCCGGGCEE
T ss_pred cCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEe---cCCCEEEEEEccCChHHCEE
Confidence 58999999997653 55679998732 1 1 110 111111110 01123579999999999999
Q ss_pred EEEEeeCC
Q psy11826 64 YECVADNP 71 (83)
Q Consensus 64 y~C~~~~~ 71 (83)
|.|.+.+.
T Consensus 91 Y~C~~~~~ 98 (116)
T 1tvd_A 91 YYCAFTLP 98 (116)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 99999873
No 465
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.82 E-value=1.1e-07 Score=47.66 Aligned_cols=69 Identities=16% Similarity=0.392 Sum_probs=45.2
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeCC--EE---ecc--------------cceEEEEEEecCCCeEEEEEEEccCCCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKDD--IE---LTF--------------HKYFQVHEWFLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~~--~~---~~~--------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 59 (83)
.+|+.+.|.|.+.+.+ .+.+.|++.. .. +.. ..++..... .......|.|.+++.+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 13 QPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRD---NSKNTLYLQMNSLRAE 89 (223)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEE---TTTTEEEEEECSCCGG
T ss_pred cCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEec---CCCCEEEEEECCCCHH
Confidence 3689999999987765 4789999742 11 100 011111110 0112357999999999
Q ss_pred CCeEEEEEeeCCC
Q psy11826 60 DAGYYECVADNPF 72 (83)
Q Consensus 60 ~~g~y~C~~~~~~ 72 (83)
|+|.|.|.+.+..
T Consensus 90 D~G~Y~C~~~~~~ 102 (223)
T 1dee_B 90 DTAVYYCAKVKFY 102 (223)
T ss_dssp GCEEEEEEEESSS
T ss_pred HCEEEEEEEeccc
Confidence 9999999998864
No 466
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.82 E-value=2.3e-08 Score=50.40 Aligned_cols=63 Identities=19% Similarity=0.424 Sum_probs=41.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEec------------c---cceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IELT------------F---HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~~------------~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
+|+.+.|.|.+.+ +.+.+.|++.. .... . ..++.... ......+|.|.+++.+|+|.|
T Consensus 16 ~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~sL~I~~v~~~D~G~Y 90 (240)
T 3q5y_A 16 KGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQ----FDDYHSEMNMSALELEDSAMY 90 (240)
T ss_dssp TTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEE----CTTSCEEEEECSCCGGGCEEE
T ss_pred CCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEe----CCCCEEEEEECcCChhHCEEE
Confidence 5899999999765 77899999821 1000 0 01111111 011245799999999999999
Q ss_pred EEEee
Q psy11826 65 ECVAD 69 (83)
Q Consensus 65 ~C~~~ 69 (83)
.|.+.
T Consensus 91 ~C~~~ 95 (240)
T 3q5y_A 91 FCASS 95 (240)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99997
No 467
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.82 E-value=3.4e-09 Score=54.05 Aligned_cols=67 Identities=15% Similarity=0.342 Sum_probs=44.1
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--EEecc---------------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--IELTF---------------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~~~~~---------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
.|+.+.|.|.+.+. .+.+.|++.. ..... ..++... ........|.|.+++.+|+|.|
T Consensus 151 ~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~~~~~~L~I~~v~~~DsG~Y 225 (256)
T 3tf7_C 151 TGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKAT----RTTQEDFFLTLESASPSQTSLY 225 (256)
T ss_dssp TTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEE----CCSSSBCEEEESSCCGGGCEEE
T ss_pred CCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEE----eCCCCeEEEEECCCCHHHCEEE
Confidence 58899999998876 7799999732 11100 0000000 0011234799999999999999
Q ss_pred EEEeeCCCc
Q psy11826 65 ECVADNPFA 73 (83)
Q Consensus 65 ~C~~~~~~g 73 (83)
.|.+.|..|
T Consensus 226 ~C~a~n~~g 234 (256)
T 3tf7_C 226 FCASSDAPG 234 (256)
T ss_dssp EEEEEEETT
T ss_pred EEEecCCCC
Confidence 999988654
No 468
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.82 E-value=3.3e-08 Score=45.93 Aligned_cols=70 Identities=23% Similarity=0.252 Sum_probs=45.2
Q ss_pred CCceEEEEeEeCccC-CCeEEEEeC--CEE---ecc--c--------ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGFP-RPHITWTKD--DIE---LTF--H--------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-~~~~~w~~~--~~~---~~~--~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
.|+.+.|.|...+.. ...+.|++. +.. +.. . .++... .........|.|.+++.+|+|.|.
T Consensus 15 ~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~---~~~~~~~~sL~I~~~~~~Dsg~Y~ 91 (129)
T 3rrq_A 15 EGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVT---QLPNGRDFHMSVVRARRNDSGTYL 91 (129)
T ss_dssp TTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEE---ECTTSSEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEE---EcCCCCEEEEEECCCChhHCEEEE
Confidence 589999999987654 457899862 211 110 0 111111 112223467999999999999999
Q ss_pred EEeeCCCcc
Q psy11826 66 CVADNPFAI 74 (83)
Q Consensus 66 C~~~~~~g~ 74 (83)
|.+.+..+.
T Consensus 92 C~~~~~~~~ 100 (129)
T 3rrq_A 92 CGAISLAPK 100 (129)
T ss_dssp EEEEECGGG
T ss_pred EEEEecCCC
Confidence 999876553
No 469
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.81 E-value=6.7e-08 Score=48.30 Aligned_cols=70 Identities=16% Similarity=0.382 Sum_probs=45.9
Q ss_pred CCCceEEEEeEeCccC--CCeEEEEeCC--EE---ecc--------------cceEEEEEEecCCCeEEEEEEEccCCCC
Q psy11826 1 MLGRKITFFCMAEGFP--RPHITWTKDD--IE---LTF--------------HKYFQVHEWFLGNNTIKSKMEIDPATQK 59 (83)
Q Consensus 1 ~~g~~~~~~C~~~~~~--~~~~~w~~~~--~~---~~~--------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 59 (83)
..|+.+.|.|.+.+.+ .+.+.|++.. .. +.. ..++.... ........|.|.+++.+
T Consensus 13 ~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~~~L~I~~v~~~ 89 (220)
T 2fbj_H 13 QPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISR---DNAKNSLYLQMSKVRSE 89 (220)
T ss_dssp CTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEE---CSSSCEEEEEECSCCGG
T ss_pred cCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEe---eCCCCEEEEEECCCChh
Confidence 3689999999987765 5789998742 11 100 01111111 01122457999999999
Q ss_pred CCeEEEEEeeCCCc
Q psy11826 60 DAGYYECVADNPFA 73 (83)
Q Consensus 60 ~~g~y~C~~~~~~g 73 (83)
|+|.|.|.+.+..+
T Consensus 90 DsG~Y~C~~~~~~~ 103 (220)
T 2fbj_H 90 DTALYYCARLHYYG 103 (220)
T ss_dssp GCEEEEEEEEETTT
T ss_pred hCEEEEEEEecccc
Confidence 99999999987643
No 470
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.81 E-value=6.8e-08 Score=43.77 Aligned_cols=65 Identities=17% Similarity=0.317 Sum_probs=43.3
Q ss_pred CCceEEEEeEeCccC-----CCeEEEEeCC--E---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFP-----RPHITWTKDD--I---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-----~~~~~w~~~~--~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
+|+.+.|.|...+.+ .+.+.|++.. . .+.. ..++.... ......|.|.+++.+|+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~DsG 89 (113)
T 1dlf_L 15 LGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-----SGTDFTLKISRVEAEDLG 89 (113)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEECSCCGGGCE
T ss_pred CCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc-----cCCEEEEEECCCChHHCE
Confidence 689999999987765 4789998732 1 1110 01111110 111347999999999999
Q ss_pred EEEEEeeCC
Q psy11826 63 YYECVADNP 71 (83)
Q Consensus 63 ~y~C~~~~~ 71 (83)
.|.|.+.+.
T Consensus 90 ~Y~C~~~~~ 98 (113)
T 1dlf_L 90 VYFCSQSTH 98 (113)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEecC
Confidence 999999865
No 471
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=98.81 E-value=8.3e-08 Score=42.81 Aligned_cols=68 Identities=21% Similarity=0.267 Sum_probs=42.1
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.++.++ .+.|.++|..+............+..+...+.|.+. .++.+.|.|.+.+...
T Consensus 18 ~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~~~~~~~~~~~~dgty~~~s~l~v~---~~~~~~ytC~V~H~~l 87 (99)
T 3p73_B 18 GTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFT---PSSGSTYACKVEHETL 87 (99)
T ss_dssp TSCEEEEEEEEEESSSCCEEEEEETTEECTTCEECCCEECTTSCEEEEEEEEEC---CCTTCCEEEEEECTTC
T ss_pred CCCEEEEEEEeeeECCCeEEEEEECCeeCCceeecceEECCCCCEEEEEEEEEE---CCCCCEEEEEEEeCCC
Confidence 5678999999987554 789999998773221111112112223334455543 4567889999987543
No 472
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.81 E-value=3.5e-09 Score=53.26 Aligned_cols=78 Identities=12% Similarity=0.218 Sum_probs=48.3
Q ss_pred CCceEEEEeEeCccCC--CeEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGFPR--PHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+.+.++ ..+.|++++..+...... ............+.|.|......| |.|.|.+.+..+......
T Consensus 146 ~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~ 223 (232)
T 3qhz_H 146 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 223 (232)
T ss_dssp --CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC-CEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEE
T ss_pred CCCcEEEEEEEeeEeCCCeEEEEEECCEecceeecc-ceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEE
Confidence 3778999999887544 357799987533211100 001111223344678898888888 999999999877655544
Q ss_pred EE
Q psy11826 80 RT 81 (83)
Q Consensus 80 ~~ 81 (83)
.+
T Consensus 224 ~l 225 (232)
T 3qhz_H 224 RV 225 (232)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 473
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.80 E-value=6.7e-08 Score=49.45 Aligned_cols=65 Identities=15% Similarity=0.269 Sum_probs=43.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEe--CCEEecc----c------------ceEEEEEEecCCCeEEEEEEEccCCCCCCeE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTK--DDIELTF----H------------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGY 63 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~--~~~~~~~----~------------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 63 (83)
.|+.+.|.|.+. .+.+.+.|++ .+..... . .++.... ......+|.|.+++.+|+|.
T Consensus 40 ~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~----~~~~~~sL~I~~v~~~D~G~ 114 (268)
T 3pl6_D 40 KGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVR----PEGSVSTLKIQRTERGDSAV 114 (268)
T ss_dssp TTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEEC----TTSSSEEEEECSCCGGGCEE
T ss_pred CCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEe----cCCCEEEEEECCCCcccCEE
Confidence 589999999975 5778999998 2221110 0 1111111 11224579999999999999
Q ss_pred EEEEeeCC
Q psy11826 64 YECVADNP 71 (83)
Q Consensus 64 y~C~~~~~ 71 (83)
|.|.+.+.
T Consensus 115 Y~C~~~~~ 122 (268)
T 3pl6_D 115 YLCATSAL 122 (268)
T ss_dssp EEEEEESS
T ss_pred EEEEEecC
Confidence 99999873
No 474
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.80 E-value=6.6e-08 Score=49.59 Aligned_cols=67 Identities=16% Similarity=0.331 Sum_probs=45.6
Q ss_pred CCceEEEEeEeCccC-----CCeEEEEeCC--EE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCe
Q psy11826 2 LGRKITFFCMAEGFP-----RPHITWTKDD--IE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~-----~~~~~w~~~~--~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g 62 (83)
+|+.+.|.|.+.+.+ .+.+.|++.. .. +.. ..++.... ......|.|.+++.+|+|
T Consensus 29 ~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~DsG 103 (268)
T 1x9q_A 29 LGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG-----SGTDFTLKINRVEAEDLG 103 (268)
T ss_dssp TTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGCE
T ss_pred CCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc-----CCCEEEEEECCCChhHCE
Confidence 689999999998876 4789999742 11 110 11122111 011347999999999999
Q ss_pred EEEEEeeCCCc
Q psy11826 63 YYECVADNPFA 73 (83)
Q Consensus 63 ~y~C~~~~~~g 73 (83)
.|.|.+.+..+
T Consensus 104 ~Y~C~~~~~~~ 114 (268)
T 1x9q_A 104 VYFCSQSTHVP 114 (268)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEecCCC
Confidence 99999988643
No 475
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.79 E-value=9.6e-08 Score=48.37 Aligned_cols=67 Identities=19% Similarity=0.366 Sum_probs=44.3
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EE---ec--------------ccceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IE---LT--------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~---~~--------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+. +.+.+.|++.. .. +. ...++..... .......|.|.+++.+|
T Consensus 15 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~D 91 (242)
T 1hxm_B 15 LSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRI---PETSTSTLTIHNVEKQD 91 (242)
T ss_dssp TTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEE---TTTTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEec---CCCcEEEEEECCCCccc
Confidence 58999999998775 66789999732 11 10 0111111110 11124579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 92 ~G~Y~C~~~~~ 102 (242)
T 1hxm_B 92 IATYYCALWEA 102 (242)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEeeecC
Confidence 99999999875
No 476
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.79 E-value=1.8e-08 Score=45.79 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=46.8
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC-------EEecc--cceEEEE---EE--ecCCCeEEEEEEEccCCCCCCeEEE
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD-------IELTF--HKYFQVH---EW--FLGNNTIKSKMEIDPATQKDAGYYE 65 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~-------~~~~~--~~~~~~~---~~--~~~~~~~~~~l~i~~~~~~~~g~y~ 65 (83)
.|+.++|.|..... ....+.|++.. ..+.. ....... .. .........+|.|.+++.+|+|.|.
T Consensus 11 ~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 90 (115)
T 2or7_A 11 AGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYC 90 (115)
T ss_dssp TTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEE
T ss_pred cCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCEEEE
Confidence 58999999997643 34679999864 11110 0000000 00 0000112347999999999999999
Q ss_pred EEeeCCCcceeeEEEE
Q psy11826 66 CVADNPFAIDRRGFRT 81 (83)
Q Consensus 66 C~~~~~~g~~~~~~~~ 81 (83)
|.+..........+.|
T Consensus 91 C~v~~~~~~~~~~v~L 106 (115)
T 2or7_A 91 CVVEIPGAFHFVDYML 106 (115)
T ss_dssp EEECCTTSCEEEEEEE
T ss_pred EEEECCCceeEEEEEE
Confidence 9998654433444433
No 477
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.79 E-value=1.2e-07 Score=53.16 Aligned_cols=70 Identities=23% Similarity=0.372 Sum_probs=48.4
Q ss_pred eEEEEeEeCc-cCCCeEEEEeCCEEecccc-eEEEEEE--e---cCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCcc
Q psy11826 5 KITFFCMAEG-FPRPHITWTKDDIELTFHK-YFQVHEW--F---LGNNTIKSKMEIDPATQKD-AGYYECVADNPFAI 74 (83)
Q Consensus 5 ~~~~~C~~~~-~~~~~~~w~~~~~~~~~~~-~~~~~~~--~---~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g~ 74 (83)
.+.+.|.+.+ .|.|.+.|++++..+.... ...+... . .+.....++|.|..++++| .+.|+|.+.|....
T Consensus 489 ~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 489 NKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred eeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 3456999887 6999999999999886432 2222111 1 1223455789999988555 78999999998643
No 478
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.78 E-value=9.5e-08 Score=49.08 Aligned_cols=69 Identities=17% Similarity=0.361 Sum_probs=45.5
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+.+ .+.+.|++.. ..+.. ..++..... .......|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~~D 90 (257)
T 3bn9_D 14 PGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRD---NSKNTLYLQMSSLRAED 90 (257)
T ss_dssp TTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEE---TTTTEEEEEEESCCGGG
T ss_pred CCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEec---CCCCEEEEEECCCChhh
Confidence 689999999988765 5789999742 11100 011111110 01123579999999999
Q ss_pred CeEEEEEeeCCCc
Q psy11826 61 AGYYECVADNPFA 73 (83)
Q Consensus 61 ~g~y~C~~~~~~g 73 (83)
+|.|.|.+.+..+
T Consensus 91 sG~Y~C~~~~~~g 103 (257)
T 3bn9_D 91 TAVYYCARPYLTY 103 (257)
T ss_dssp CEEEEEEEECCSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999988654
No 479
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.78 E-value=1.3e-08 Score=52.86 Aligned_cols=66 Identities=15% Similarity=0.259 Sum_probs=45.0
Q ss_pred CCceEEEEeEeCccCCC------eEEEEeCC--EEe---cc---------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFPRP------HITWTKDD--IEL---TF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~------~~~w~~~~--~~~---~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
.|+.+.|.|.+.+.+.+ .+.|+++. ... .. ..++.... ......|.|.+++.+|+
T Consensus 173 ~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~Ds 247 (291)
T 2gki_A 173 AGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSG-----SGTDFTLTISSVQAEDL 247 (291)
T ss_dssp TTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEESSCCGGGC
T ss_pred CCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEe-----cCCEEEEEECCCCHHHC
Confidence 58899999999888765 89999852 211 10 11111110 01134799999999999
Q ss_pred eEEEEEeeCCC
Q psy11826 62 GYYECVADNPF 72 (83)
Q Consensus 62 g~y~C~~~~~~ 72 (83)
|.|.|.+.+..
T Consensus 248 G~Y~C~a~~~~ 258 (291)
T 2gki_A 248 AVYYCKQSYYH 258 (291)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEccCC
Confidence 99999998743
No 480
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.78 E-value=1.4e-08 Score=51.35 Aligned_cols=77 Identities=14% Similarity=0.331 Sum_probs=48.7
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeEE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGF 79 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~~ 79 (83)
.|+.+.+.|.+.+. |.+ .+.|++++..+..... ......+......+.|.|......| |.|.|.+.+..+......
T Consensus 154 ~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 231 (239)
T 3tv3_H 154 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF-PAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 231 (239)
T ss_dssp -TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEC-CCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEE
T ss_pred cCCcEEEEEEEeeEeCCCeEEEEEECCccCceEec-CceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEE
Confidence 47889999998874 444 4789998754321110 0011112223345678898888888 999999999876654443
Q ss_pred E
Q psy11826 80 R 80 (83)
Q Consensus 80 ~ 80 (83)
.
T Consensus 232 ~ 232 (239)
T 3tv3_H 232 R 232 (239)
T ss_dssp E
T ss_pred E
Confidence 3
No 481
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.77 E-value=3.1e-09 Score=48.11 Aligned_cols=65 Identities=18% Similarity=0.298 Sum_probs=44.0
Q ss_pred CCceEEEEeEeC-ccCCCeEEEEeC--CE---Eec-----c----------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAE-GFPRPHITWTKD--DI---ELT-----F----------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~-~~~~~~~~w~~~--~~---~~~-----~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|... +.+.+.+.|++. +. .+. . ..++.... ......|.|.+++.+|
T Consensus 13 ~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~~~~~D 87 (111)
T 2qhl_A 13 RGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV-----NDQKFDLNIIGTREDD 87 (111)
T ss_dssp TTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE-----SSSBEEEEESSCCGGG
T ss_pred CCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEE-----cCCeEEEEECCCChhH
Confidence 689999999987 767778999873 21 111 0 01111110 1123579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 88 sG~Y~C~~~~~ 98 (111)
T 2qhl_A 88 GGEYFCGEVEG 98 (111)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEccC
Confidence 99999999764
No 482
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.77 E-value=1.4e-08 Score=50.60 Aligned_cols=72 Identities=21% Similarity=0.429 Sum_probs=43.9
Q ss_pred CCceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCcceeeE
Q psy11826 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRG 78 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g~~~~~ 78 (83)
.|+.+.|.|.+.+. |.| .+.|++++..+........ . ........+.|. .....+ |.|.|.+.|..+.....
T Consensus 136 ~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~-~-~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 136 TSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAV-L-QSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCCCE-E-ETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecCcc-c-CCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEE
Confidence 47889999999886 777 8999998764332110000 0 011111223344 444455 99999999988875443
No 483
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.77 E-value=1.3e-08 Score=49.65 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=43.1
Q ss_pred CCceEEEEeEeCc-cCCCeEEEEeC-CEEecc---cceEEEEEEec--CCC---eEEEEEEEccCCCCCCeEEEEEeeCC
Q psy11826 2 LGRKITFFCMAEG-FPRPHITWTKD-DIELTF---HKYFQVHEWFL--GNN---TIKSKMEIDPATQKDAGYYECVADNP 71 (83)
Q Consensus 2 ~g~~~~~~C~~~~-~~~~~~~w~~~-~~~~~~---~~~~~~~~~~~--~~~---~~~~~l~i~~~~~~~~g~y~C~~~~~ 71 (83)
+|+.+.|.|...+ .+.+.+.|++. +..+.. ........ .. ... ....+|.|.+++.+|+|.|.|.+.+.
T Consensus 13 ~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~-~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~ 91 (180)
T 2dru_A 13 TGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFE-SVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLHE 91 (180)
T ss_dssp TTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECS-STTTTTEEECTTTCCEEECSCCGGGCEEEEEEEESS
T ss_pred eCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcc-hhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEEEcC
Confidence 6899999998744 34678999984 322211 00000000 00 000 01236999999999999999998776
Q ss_pred C
Q psy11826 72 F 72 (83)
Q Consensus 72 ~ 72 (83)
.
T Consensus 92 ~ 92 (180)
T 2dru_A 92 T 92 (180)
T ss_dssp S
T ss_pred C
Confidence 5
No 484
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=98.77 E-value=9.7e-08 Score=42.44 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=41.6
Q ss_pred CceEEEEeEeCccCCC--eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGFPRP--HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.|+.++ .+.|.++|..+............+......+.|.+ ..++.+.|.|.+.+..-
T Consensus 18 ~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~~~~~~~~~~~~dgty~~~s~l~v---~~~~~~~ytC~V~H~~l 87 (97)
T 3gbl_A 18 GKENTLICYVSGFHPPDISIELLKNGEVIADAQQTDLAFEKGWQFHLTKSVSF---KPEKSDEYSCSVRHMSK 87 (97)
T ss_dssp TCCEEEEEEEECCBSSCEEEEEEETTEECTTCEECCCEEETTTEEEEEEEEEE---CCCTTCCEEEEEEETTE
T ss_pred CCcEEEEEEEcceeCCccEEEEEECCccCccccccccEeCCCCcEEEEEEEEE---eCCCCCEEEEEEEeCCC
Confidence 5678999999987444 68999999887532111111211112223344554 44567889999987543
No 485
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.77 E-value=3e-08 Score=51.54 Aligned_cols=68 Identities=19% Similarity=0.354 Sum_probs=44.7
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|.+.+.+ .+.+.|++.. ..... ..++..... ......+|.|.+++.+|
T Consensus 36 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~~D 112 (291)
T 2gki_A 36 PGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSD---KSSSTAYMELSSLTSED 112 (291)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEE---GGGTEEEEEECSCCGGG
T ss_pred CCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEe---CCCCEEEEEECcCCHHH
Confidence 689999999987766 5789999842 11100 011111100 01113579999999999
Q ss_pred CeEEEEEeeCCC
Q psy11826 61 AGYYECVADNPF 72 (83)
Q Consensus 61 ~g~y~C~~~~~~ 72 (83)
+|.|.|.+.+..
T Consensus 113 sG~Y~C~~~~~~ 124 (291)
T 2gki_A 113 SAVYYCARGAYK 124 (291)
T ss_dssp CEEEEEEEECGG
T ss_pred CEEEEEEEeccc
Confidence 999999998864
No 486
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.76 E-value=1.8e-08 Score=51.31 Aligned_cols=71 Identities=15% Similarity=0.276 Sum_probs=47.0
Q ss_pred CceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+. |.+ .+.|++++..+............+......+.|.+......+.+.|.|.+.+..-
T Consensus 145 g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 145 KNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 6789999999884 543 6999999987653221111111122334456778777666678999999998653
No 487
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.76 E-value=5.6e-08 Score=49.88 Aligned_cols=67 Identities=15% Similarity=0.297 Sum_probs=45.8
Q ss_pred CCceEEEEeEeCccC------CCeEEEEeC--CEEe---cc---------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP------RPHITWTKD--DIEL---TF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~------~~~~~w~~~--~~~~---~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.+.|.|.+.+.+ .+.+.|++. +..+ .. ..++.... ......|.|.+++.+|+
T Consensus 19 ~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~v~~~Ds 93 (264)
T 2gjj_A 19 VGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG-----SGTDFTLTIGSVKAEDL 93 (264)
T ss_dssp TTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEESSCCGGGC
T ss_pred CCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec-----CCCEEEEEECCCCHHHC
Confidence 589999999998877 678999974 2211 10 11222111 01134799999999999
Q ss_pred eEEEEEeeCCCc
Q psy11826 62 GYYECVADNPFA 73 (83)
Q Consensus 62 g~y~C~~~~~~g 73 (83)
|.|.|.+.+..+
T Consensus 94 G~Y~C~~~~~~~ 105 (264)
T 2gjj_A 94 AVYYCQQYSNYP 105 (264)
T ss_dssp EEEEEEECSSSS
T ss_pred EEEEEEEecCCc
Confidence 999999988643
No 488
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.76 E-value=2.7e-07 Score=45.80 Aligned_cols=67 Identities=21% Similarity=0.421 Sum_probs=44.4
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EEec----------------ccceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IELT----------------FHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.+.|.|.+.+. +.+.+.|++.. .... ...++.... ......|.|.+++.+|+
T Consensus 13 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 13 PGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-----TSTTVDLKITSPTTEDT 87 (215)
T ss_dssp TTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-----CSSEEEEEESSCCGGGC
T ss_pred CCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-----eCCEEEEEECCCCcccC
Confidence 68999999998663 46789998632 1100 011111111 12245699999999999
Q ss_pred eEEEEEeeCCCc
Q psy11826 62 GYYECVADNPFA 73 (83)
Q Consensus 62 g~y~C~~~~~~g 73 (83)
|.|.|.+.+..+
T Consensus 88 G~Y~C~~~~~~~ 99 (215)
T 3nl4_H 88 ATYFCVRKYGSE 99 (215)
T ss_dssp EEEEEEEECSSS
T ss_pred EEEEEEEecCCC
Confidence 999999988644
No 489
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.76 E-value=1.7e-08 Score=50.97 Aligned_cols=72 Identities=15% Similarity=0.280 Sum_probs=47.4
Q ss_pred CceEEEEeEeCcc-CCC-eEEEEeCCEEecccceEEEEEE------ecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEW------FLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~~-~~~w~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.|.|.+.+. |.+ .+.|+++|..+........... .+......+.|.|......| .|.|.|.+.+...
T Consensus 139 g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~ 218 (245)
T 3nfj_J 139 TQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred CCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCC
Confidence 6789999999885 444 6889999988765321110000 01222334578888887777 6799999987654
Q ss_pred c
Q psy11826 74 I 74 (83)
Q Consensus 74 ~ 74 (83)
.
T Consensus 219 ~ 219 (245)
T 3nfj_J 219 S 219 (245)
T ss_dssp C
T ss_pred C
Confidence 3
No 490
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.76 E-value=1.6e-07 Score=42.64 Aligned_cols=67 Identities=16% Similarity=0.230 Sum_probs=42.6
Q ss_pred CCceEEEEeEeCcc---CCCeEEEEeCC--E---Eecc-------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGF---PRPHITWTKDD--I---ELTF-------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~---~~~~~~w~~~~--~---~~~~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
+|+.+.|.|..... +...+.|++.. . .+.. ..++.... .......+|.|.+++.+|
T Consensus 12 ~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~~sL~I~~~~~~D 88 (116)
T 3bj9_1 12 LGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSK---DVARNRGYLSISELQPED 88 (116)
T ss_dssp TTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEE---EGGGTEEEEEECSCCGGG
T ss_pred CCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEe---cCCCceEEEEECCCChhH
Confidence 58999999998643 45679998732 1 1110 00111110 011123479999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 89 sG~Y~C~~~~~ 99 (116)
T 3bj9_1 89 EAMYYCAMGAR 99 (116)
T ss_dssp CEEEEEEECCS
T ss_pred CEEEEEEEeCC
Confidence 99999999865
No 491
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.75 E-value=9.6e-09 Score=50.80 Aligned_cols=68 Identities=16% Similarity=0.160 Sum_probs=44.7
Q ss_pred CCceEEEEeEeCcc-------CCCeEEEEeCCEEec----c-------------cceEEEEEEecCCCeEEEEEEEccCC
Q psy11826 2 LGRKITFFCMAEGF-------PRPHITWTKDDIELT----F-------------HKYFQVHEWFLGNNTIKSKMEIDPAT 57 (83)
Q Consensus 2 ~g~~~~~~C~~~~~-------~~~~~~w~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~ 57 (83)
.|+.+.|.|.+.+. +.+.+.|++++.... . ..+..... .......+|.|.+++
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 14 EGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLG---DVQKKNCSLSIGDAR 90 (214)
T ss_dssp TTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECS---CGGGTBCCEEECSCC
T ss_pred cCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEec---cCCCCeEEEEEccCC
Confidence 58999999997643 567899999764210 0 01111100 001113369999999
Q ss_pred CCCCeEEEEEeeCCC
Q psy11826 58 QKDAGYYECVADNPF 72 (83)
Q Consensus 58 ~~~~g~y~C~~~~~~ 72 (83)
.+|.|.|.|.+.+..
T Consensus 91 ~~D~G~Y~C~~~~~~ 105 (214)
T 2zg1_A 91 MEDTGSYFFRVERGR 105 (214)
T ss_dssp GGGCEEEEEEEEETT
T ss_pred HhhCceEEEEEEcCC
Confidence 999999999998765
No 492
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.74 E-value=4.1e-07 Score=43.07 Aligned_cols=65 Identities=17% Similarity=0.277 Sum_probs=44.3
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CE---Eecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DI---ELTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~---~~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
.|+.++|.|.....+...+.|++. +. .+.. ..++.... ......|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~-----~~~~~sL~I~~l~~~DsG~Y~C~ 88 (143)
T 3u6r_L 14 PGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG-----SGTDFTLTISNLEPEDFAVYYCQ 88 (143)
T ss_dssp TTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-----ETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEc-----cCCEEEEEEccCcccCCEEEEEE
Confidence 689999999988766778999973 21 1110 11222110 11245799999999999999999
Q ss_pred eeCC
Q psy11826 68 ADNP 71 (83)
Q Consensus 68 ~~~~ 71 (83)
+.+.
T Consensus 89 ~~~~ 92 (143)
T 3u6r_L 89 QRSD 92 (143)
T ss_dssp ECSS
T ss_pred EecC
Confidence 8764
No 493
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.74 E-value=2e-08 Score=51.14 Aligned_cols=70 Identities=14% Similarity=0.286 Sum_probs=46.3
Q ss_pred CceEEEEeEeCc-cCCC-eEEEEeCCEEecccceEEEEEE------ecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCC
Q psy11826 3 GRKITFFCMAEG-FPRP-HITWTKDDIELTFHKYFQVHEW------FLGNNTIKSKMEIDPATQKD-AGYYECVADNPF 72 (83)
Q Consensus 3 g~~~~~~C~~~~-~~~~-~~~w~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~ 72 (83)
|+.+.|.|.+.+ .|.+ .+.|+++|..+........... .+......+.|.+......| .+.|.|.+.+..
T Consensus 139 g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 139 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 478899999988 5666 7899999988765321110000 01222334578888877777 779999998754
No 494
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.74 E-value=1.7e-07 Score=47.74 Aligned_cols=70 Identities=13% Similarity=0.284 Sum_probs=42.8
Q ss_pred CCceEEEEeEeCccCCCeEEEEeC--CEEe--c----ccceEEEE-----EEecCCCeEEEEEEEccCCCCCCeEEEEEe
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKD--DIEL--T----FHKYFQVH-----EWFLGNNTIKSKMEIDPATQKDAGYYECVA 68 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~--~~~~--~----~~~~~~~~-----~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~ 68 (83)
.|+.+.|.|...+.+.+.+.|++. +... . ........ ........... |.|.+++.+|+|.|.|.+
T Consensus 15 ~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~Y~C~~ 93 (253)
T 3to4_D 15 RGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRTLYCTS 93 (253)
T ss_dssp SSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEEEEEEE
T ss_pred CCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeEEEEEE
Confidence 589999999988888889999872 2111 0 00000000 00000000011 999999999999999999
Q ss_pred eCCC
Q psy11826 69 DNPF 72 (83)
Q Consensus 69 ~~~~ 72 (83)
.+..
T Consensus 94 ~~~~ 97 (253)
T 3to4_D 94 SADH 97 (253)
T ss_dssp ECSC
T ss_pred ecCC
Confidence 7653
No 495
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.74 E-value=3.6e-08 Score=49.16 Aligned_cols=67 Identities=16% Similarity=0.405 Sum_probs=43.6
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EEec------c-------------cceEEEEEEecCCCeEEEEEEEccCCC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IELT------F-------------HKYFQVHEWFLGNNTIKSKMEIDPATQ 58 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~~~------~-------------~~~~~~~~~~~~~~~~~~~l~i~~~~~ 58 (83)
.|+.+.|.|.+.+. +.+.+.|++.. .... . ..++..... ......+|.|.+++.
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~I~~v~~ 90 (221)
T 3m8o_H 14 PGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRD---DSKNTAFLQMNSLKS 90 (221)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEE---GGGTEEEEEECSCCG
T ss_pred CCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEec---CCCCEEEEEECCCCH
Confidence 68999999998764 36789998632 1110 0 011221110 111244799999999
Q ss_pred CCCeEEEEEeeCC
Q psy11826 59 KDAGYYECVADNP 71 (83)
Q Consensus 59 ~~~g~y~C~~~~~ 71 (83)
+|+|.|.|.+.+.
T Consensus 91 ~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 91 DDTAMYYCVIRGD 103 (221)
T ss_dssp GGCEEEEEEEESC
T ss_pred HHCEEEEEEEECC
Confidence 9999999999875
No 496
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.74 E-value=2.7e-08 Score=51.46 Aligned_cols=67 Identities=15% Similarity=0.362 Sum_probs=44.1
Q ss_pred CCceEEEEeEeCcc--CCCeEEEEeCC--EEecc-----------------cceEEEEEEecCCCeEEEEEEEccCCCCC
Q psy11826 2 LGRKITFFCMAEGF--PRPHITWTKDD--IELTF-----------------HKYFQVHEWFLGNNTIKSKMEIDPATQKD 60 (83)
Q Consensus 2 ~g~~~~~~C~~~~~--~~~~~~w~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 60 (83)
.|+.+.|.|.+.+. +.+.+.|++.. ..... ..++.+.. .......+|.|.+++.+|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~~sL~I~~v~~~D 90 (280)
T 3fku_X 14 PGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITA---DQSTRTAYMDLRSLRSED 90 (280)
T ss_dssp TTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEE---ETTTTEEEEEECSCCSTT
T ss_pred CCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEE---eCCCCEEEEEECCCChhh
Confidence 68999999998775 56789998732 11110 01111110 011123579999999999
Q ss_pred CeEEEEEeeCC
Q psy11826 61 AGYYECVADNP 71 (83)
Q Consensus 61 ~g~y~C~~~~~ 71 (83)
+|.|.|.+.+.
T Consensus 91 sG~Y~C~~~~~ 101 (280)
T 3fku_X 91 TAVYYCARSPS 101 (280)
T ss_dssp CEECCEEECSS
T ss_pred CEEEEEEEecC
Confidence 99999999886
No 497
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.74 E-value=2.2e-07 Score=42.31 Aligned_cols=67 Identities=13% Similarity=0.326 Sum_probs=43.3
Q ss_pred CCceEEEEeEeCccC--CCeEEEEeCC--E---Eec---c----------cceEEEEEEecCCCeEEEEEEEccCCCCCC
Q psy11826 2 LGRKITFFCMAEGFP--RPHITWTKDD--I---ELT---F----------HKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~--~~~~~w~~~~--~---~~~---~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 61 (83)
+|+.++|.|...+.+ ...+.|++.. . .+. . ..++..... .......|.|.+++.+|+
T Consensus 14 ~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~~~~~Ds 90 (116)
T 1a2y_B 14 PSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKD---NSKSQVFLKMNSLHTDDT 90 (116)
T ss_dssp TTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEE---GGGTEEEEEECSCCGGGC
T ss_pred CCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEE---CCCCEEEEEECCCCHHHC
Confidence 689999999986543 4689998732 1 110 0 011221111 112245799999999999
Q ss_pred eEEEEEeeCC
Q psy11826 62 GYYECVADNP 71 (83)
Q Consensus 62 g~y~C~~~~~ 71 (83)
|.|.|.+.+.
T Consensus 91 g~Y~C~~~~~ 100 (116)
T 1a2y_B 91 ARYYCARERD 100 (116)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEEecC
Confidence 9999999865
No 498
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.74 E-value=1e-08 Score=52.87 Aligned_cols=72 Identities=15% Similarity=0.268 Sum_probs=46.6
Q ss_pred CceEEEEeEeCcc-CC-CeEEEEeCCEEecccceEEE--EE----EecCCCeEEEEEEEccCCCCC-CeEEEEEeeCCCc
Q psy11826 3 GRKITFFCMAEGF-PR-PHITWTKDDIELTFHKYFQV--HE----WFLGNNTIKSKMEIDPATQKD-AGYYECVADNPFA 73 (83)
Q Consensus 3 g~~~~~~C~~~~~-~~-~~~~w~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~~~~g 73 (83)
|+.+.+.|.+.+. |. +.+.|++++..+........ .. ..+......+.|.|......| .+.|+|.+.|...
T Consensus 165 g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~ 244 (279)
T 2wbj_D 165 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 244 (279)
T ss_dssp HSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCB
T ss_pred CCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCC
Confidence 6778999999886 43 68999999987764321100 00 001122344568887777665 6789999998654
Q ss_pred c
Q psy11826 74 I 74 (83)
Q Consensus 74 ~ 74 (83)
.
T Consensus 245 ~ 245 (279)
T 2wbj_D 245 S 245 (279)
T ss_dssp C
T ss_pred C
Confidence 3
No 499
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.73 E-value=2.7e-08 Score=45.03 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=42.6
Q ss_pred CCceEEEEeEeCccCCCeEEEEeCC--E---Eecc---c------ceEEEEEEecCCCeEEEEEEEccCCCCCCeEEEEE
Q psy11826 2 LGRKITFFCMAEGFPRPHITWTKDD--I---ELTF---H------KYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~~~~~~w~~~~--~---~~~~---~------~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 67 (83)
+|+.++|.|...+.+.+.+.|++.. . .+.. . .++... .........|.|.+++.+|+|.|.|.
T Consensus 14 ~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~---~~~~~~~~~L~I~~~~~~DsG~Y~C~ 90 (112)
T 2z35_A 14 EEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEAT---YNKEATSFHLQKASVQESDSAVYYCA 90 (112)
T ss_dssp TTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEE---CBTTTTBCCEEESSCCSTTCSEEEEE
T ss_pred CCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEE---EcCCCCEEEEEECCCChhhCEEEEEE
Confidence 5899999999877677789999732 1 1110 0 111110 01111234699999999999999999
Q ss_pred ee
Q psy11826 68 AD 69 (83)
Q Consensus 68 ~~ 69 (83)
+.
T Consensus 91 ~~ 92 (112)
T 2z35_A 91 LS 92 (112)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 500
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.73 E-value=1.6e-07 Score=43.03 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=43.4
Q ss_pred CCceEEEEeEeCccC---CCeEEEEeC--CEE---ecc---------cceEEEEEEecCCCeEEEEEEEccCCCCCCeEE
Q psy11826 2 LGRKITFFCMAEGFP---RPHITWTKD--DIE---LTF---------HKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYY 64 (83)
Q Consensus 2 ~g~~~~~~C~~~~~~---~~~~~w~~~--~~~---~~~---------~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 64 (83)
+|+.+.|.|...+.+ .+.+.|++. +.. +.. ..++.... ......|.|.+++.+|+|.|
T Consensus 14 ~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~-----~~~~~~L~I~~~~~~DsG~Y 88 (120)
T 1oaq_L 14 PGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-----IGNKAALTITGAQTEDEAIY 88 (120)
T ss_dssp TTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEE-----ETTEEEEEEESCCGGGCEEE
T ss_pred CCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEec-----CCCeEEEEECCCChhhCeEE
Confidence 689999999987765 567999873 211 110 11222111 01135799999999999999
Q ss_pred EEEeeCC
Q psy11826 65 ECVADNP 71 (83)
Q Consensus 65 ~C~~~~~ 71 (83)
.|.+.+.
T Consensus 89 ~C~~~~~ 95 (120)
T 1oaq_L 89 FCALWYS 95 (120)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 9998764
Done!