RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11826
(83 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 58.7 bits (141), Expect = 9e-14
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
+ F C A G P P + W K+ E ++ + ++ + D G
Sbjct: 20 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIME----SVVPSDKG 75
Query: 63 YYECVADNPF 72
Y CV +N +
Sbjct: 76 NYTCVVENEY 85
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 53.6 bits (128), Expect = 8e-12
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 10/70 (14%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G+ +T C G P P++ W+ + L+ + V + L I D G
Sbjct: 18 GQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRA-TVTDSGL---------VIKGVKNGDKG 67
Query: 63 YYECVADNPF 72
YY C A N
Sbjct: 68 YYGCRATNEH 77
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 51.9 bits (123), Expect = 4e-11
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G+ + C EG P I W KD + + + + + DAG
Sbjct: 11 GQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWI---GFLSLKSVERSDAG 67
Query: 63 YYECVADNPF 72
Y C ++
Sbjct: 68 RYWCQVEDGG 77
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 51.4 bits (122), Expect = 7e-11
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G + F G TW K ++ ++ +V G+ K+ I A Q+ G
Sbjct: 15 GESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGS-----KLTILAARQEHCG 69
Query: 63 YYECVADNPFAIDR 76
Y + +N +
Sbjct: 70 CYTLLVENKLGSRQ 83
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 50.6 bits (120), Expect = 1e-10
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
LG+ +T C A+GFP P ++WTKD + + F +++ + I + D
Sbjct: 19 LGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSE---LTIRNVDKNDE 75
Query: 62 GYYECVADNPF 72
Y C+A+N
Sbjct: 76 AEYVCIAENKA 86
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 50.8 bits (120), Expect = 1e-10
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 1 MLGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIK---SKMEIDPA 56
+G + C +G P +W KD I + + + + TI + DP
Sbjct: 15 TIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPV 74
Query: 57 TQKDAGYYECVADNPFAIDRR 77
T D+G Y C A N + R
Sbjct: 75 TAFDSGEYYCQAQNGYGTAMR 95
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 50.7 bits (120), Expect = 1e-10
Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 1 MLGRKITFFCMAEGFPRPHITWTKDDIEL--------TFHKYFQVHEWFLGNNTIKSKME 52
++G + F C +PHI W K + + + +
Sbjct: 18 VVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLY 77
Query: 53 IDPATQKDAGYYECVADNPF 72
I T +DAG Y C+A N
Sbjct: 78 IRNVTFEDAGEYTCLAGNSI 97
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 47.7 bits (112), Expect = 2e-09
Identities = 14/75 (18%), Positives = 26/75 (34%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
+G P+P + W + L KY + +++D T + G
Sbjct: 16 DHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG 75
Query: 63 YYECVADNPFAIDRR 77
Y +A N + D +
Sbjct: 76 DYTLIAKNEYGKDEK 90
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 47.2 bits (111), Expect = 4e-09
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELT--FHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
+G P P + W + L + + E + ++ T +
Sbjct: 15 MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVN 74
Query: 61 AGYYECVADNPFAIDRR 77
G Y +A NPF
Sbjct: 75 NGNYTLLAANPFGQASA 91
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 46.9 bits (110), Expect = 5e-09
Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 3 GRKITFFCMAEGFP-RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G C + RPH+TW K + + W N + +P D
Sbjct: 18 GDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDN 77
Query: 62 GYYECVADNP 71
G Y C A+
Sbjct: 78 GSYRCSANFQ 87
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 46.2 bits (108), Expect = 1e-08
Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 1 MLGRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLG--NNTIKSKMEIDPAT 57
+G + C +G P TW KD I + + N ++ DP +
Sbjct: 15 TIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLS 74
Query: 58 QKDAGYYECVADNPFAIDRR 77
D G Y C A N +
Sbjct: 75 ASDTGEYSCEARNGYGTPMT 94
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 44.8 bits (105), Expect = 2e-08
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G F C +G P P +TW + L+ QV KS EI D G
Sbjct: 14 GESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTK-----YKSTFEISSVQASDEG 68
Query: 63 YYECVADNPF 72
Y V +N
Sbjct: 69 NYSVVVENSE 78
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 44.8 bits (105), Expect = 2e-08
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 11/77 (14%)
Query: 1 MLGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
+ G+ +T C A G P P I W + + + I +D
Sbjct: 18 LTGQMVTLECFAFGNPVPQIKW-----------RKLDGSQTSKWLSSEPLLHIQNVDFED 66
Query: 61 AGYYECVADNPFAIDRR 77
G YEC A+N D
Sbjct: 67 EGTYECEAENIKGRDTY 83
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 44.1 bits (103), Expect = 4e-08
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G F G P P W K+ +++ + ++ I T +D+
Sbjct: 19 GSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYW----PEDNVCELVIRDVTGEDSA 74
Query: 63 YYECVADNPF 72
A N
Sbjct: 75 SIMVKAINIA 84
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 43.3 bits (101), Expect = 7e-08
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
+G + + C+A G PRP + W +D L +V L +D+
Sbjct: 15 IGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGEL---------RFSKLVLEDS 65
Query: 62 GYYECVADNPF 72
G Y+CVA+N
Sbjct: 66 GMYQCVAENKH 76
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 43.4 bits (101), Expect = 8e-08
Identities = 11/69 (15%), Positives = 18/69 (26%), Gaps = 6/69 (8%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G C P I W ++ K + + ++I + D G
Sbjct: 16 GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS------NNYLQIRGIKKTDEG 69
Query: 63 YYECVADNP 71
Y C
Sbjct: 70 TYRCEGRIL 78
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 43.3 bits (101), Expect = 1e-07
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G F C EG+P P + W KDD + ++FQ+ GN + I D
Sbjct: 23 GSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN----CSLTISEVCGDDDA 78
Query: 63 YYECVADNPF 72
Y C A N
Sbjct: 79 KYTCKAVNSL 88
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 43.4 bits (101), Expect = 1e-07
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G +CM P + + K+ ++ + ++ + ++ +D G
Sbjct: 18 GDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSG---KRLLFKTTLPEDEG 74
Query: 63 YYECVADNPF 72
Y C DN
Sbjct: 75 VYTCEVDNGV 84
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 43.3 bits (101), Expect = 1e-07
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G+ F+C P +TW KDD EL + + I+ D G
Sbjct: 16 GQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNG-----NDYGLTINRVKGDDKG 70
Query: 63 YYECVADNPF 72
Y A N +
Sbjct: 71 EYTVRAKNSY 80
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 43.5 bits (101), Expect = 1e-07
Identities = 15/102 (14%), Positives = 26/102 (25%), Gaps = 24/102 (23%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHE----------------------- 39
G K+ G P P + W K + +
Sbjct: 24 GNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEG 83
Query: 40 -WFLGNNTIKSKMEIDPATQKDAGYYECVADNPFAIDRRGFR 80
+ +S ++ A ++D G Y NP D+
Sbjct: 84 RVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLT 125
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 42.7 bits (99), Expect = 2e-07
Identities = 6/73 (8%), Positives = 17/73 (23%), Gaps = 6/73 (8%)
Query: 3 GRKITFFCMAEG---FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQK 59
G+ T C + + + L + + + + +
Sbjct: 17 GKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPA---PQEATATFNSTADRED 73
Query: 60 DAGYYECVADNPF 72
+ C+A
Sbjct: 74 GHRNFSCLAVLDL 86
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 41.0 bits (95), Expect = 6e-07
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
K+T C A P W + EL + + +P KDAG
Sbjct: 22 EEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVA------GDLVISNPVKAKDAG 75
Query: 63 YYECVADNPF 72
Y+CVA N
Sbjct: 76 SYQCVATNAR 85
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 40.8 bits (94), Expect = 8e-07
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G+ TF C A G I + + + T++DAG
Sbjct: 16 GQFATFQCSAIGRTVAGDRLWLQGI--DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAG 73
Query: 63 YYECVADNPF 72
Y C+
Sbjct: 74 KYRCMIRTEG 83
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 40.5 bits (93), Expect = 1e-06
Identities = 17/87 (19%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Query: 2 LGRKITFFCMAEGFPRPHITWTK-------DDIELTFHKYFQVHEWFLGNNTIKSKMEID 54
LG +I C G W DD L Y + +T+ + + I
Sbjct: 16 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 75
Query: 55 PATQKDAG-YYECVADNPFAIDRRGFR 80
+ + C A N ID +
Sbjct: 76 EIESRFYKHPFTCFAKNTHGIDAAYIQ 102
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 39.1 bits (90), Expect = 4e-06
Identities = 9/69 (13%), Positives = 15/69 (21%), Gaps = 9/69 (13%)
Query: 3 GRKITFFCMAEGFPRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G +T C + W H ++ + D+
Sbjct: 21 GDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMG--------RRLLLRSVQLHDS 72
Query: 62 GYYECVADN 70
G Y C
Sbjct: 73 GNYSCYRAG 81
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 39.0 bits (90), Expect = 4e-06
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 1 MLGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
G ++ C ++ W K+ E+ + G I + I+ AT+ D
Sbjct: 13 YCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHI---LIIEGATKAD 68
Query: 61 AGYYECVADN 70
A Y +
Sbjct: 69 AAEYSVMTTG 78
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 37.6 bits (86), Expect = 1e-05
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Query: 3 GRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G +TF C A+ P + WT+ + + + I DA
Sbjct: 17 GADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFN----------GILTIRNVQPSDA 66
Query: 62 GYYECVADNPFAIDRR 77
G Y C N FA+D+
Sbjct: 67 GTYVCTGSNMFAMDQG 82
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 37.5 bits (86), Expect = 2e-05
Identities = 9/71 (12%), Positives = 19/71 (26%), Gaps = 7/71 (9%)
Query: 3 GRKITFFCMAEG-FPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G+++T C EG PR +T ++ + +
Sbjct: 19 GKQLTLRCQVEGGAPRAQLTVV------LLRGEKELKREPAVGEPAEVTTTVLVRRDHHG 72
Query: 62 GYYECVADNPF 72
+ C +
Sbjct: 73 AQFSCRTELDL 83
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 37.2 bits (85), Expect = 2e-05
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 7 TFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66
+ G P P + W + L K V + G + + + + T + G Y
Sbjct: 21 CIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS-EGCLLFNKPTHYNNGNYTL 79
Query: 67 VADNPFAIDRRGFR 80
+A NP +
Sbjct: 80 IAKNPLGTANQTIN 93
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 36.8 bits (84), Expect = 3e-05
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 6/75 (8%)
Query: 1 MLGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIK-----SKMEIDP 55
++ +TF P + W K ++ + + + N + + I
Sbjct: 8 VVYGNVTFHV-PSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYN 66
Query: 56 ATQKDAGYYECVADN 70
T D YE + N
Sbjct: 67 LTSSDEDEYEMESPN 81
>d1ow0a1 b.1.1.2 (A:242-342) Immunoglobulin heavy chain alpha
constant domain 2, CH2-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 36.2 bits (83), Expect = 5e-05
Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 5/74 (6%)
Query: 1 MLGRKITFFCMAEGFPRP---HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPAT 57
+LG + C G TWT + + G ++ S +
Sbjct: 16 LLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPERDL--CGCYSVSSVLPGCAEP 73
Query: 58 QKDAGYYECVADNP 71
+ C A P
Sbjct: 74 WNHGKTFTCTAAYP 87
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 36.2 bits (83), Expect = 6e-05
Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Query: 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
I C+ G+ P ITW +D + + +S++ +
Sbjct: 21 PPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLS 80
Query: 61 AGYYECVADNP 71
Y C
Sbjct: 81 DRTYTCQVTYQ 91
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 35.4 bits (80), Expect = 1e-04
Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQV--HEWFLGNNTIKSKMEIDPATQKD 60
G C +E P + +F+ ++ +S++ I+ +
Sbjct: 17 GETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA 76
Query: 61 -AGYYECVADNPF 72
G Y C +
Sbjct: 77 DPGQYRCNGTSSK 89
>d1vcaa1 b.1.1.3 (A:91-199) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 35.7 bits (81), Expect = 1e-04
Identities = 11/71 (15%), Positives = 18/71 (25%), Gaps = 2/71 (2%)
Query: 3 GRKITFFCMAEG-FPRPHITWT-KDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
G+ IT C +P + L + F T ++ P +
Sbjct: 16 GKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDI 75
Query: 61 AGYYECVADNP 71
C A
Sbjct: 76 GKVLVCRAKLH 86
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 35.4 bits (80), Expect = 1e-04
Identities = 15/85 (17%), Positives = 20/85 (23%), Gaps = 7/85 (8%)
Query: 3 GRKITFFCMAEGFP---RPHITWTKDDIELTF----HKYFQVHEWFLGNNTIKSKMEIDP 55
G ITF G P + W K + + ++ I
Sbjct: 19 GGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITD 78
Query: 56 ATQKDAGYYECVADNPFAIDRRGFR 80
A G Y C D F
Sbjct: 79 AQPAFTGGYRCEVSTKDKFDCSNFN 103
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 35.2 bits (80), Expect = 1e-04
Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G KI + W K+ E+ + E T + I + D
Sbjct: 21 GHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKRT----LTISQCSLADDA 75
Query: 63 YYECVADN 70
Y+CV
Sbjct: 76 AYQCVVGG 83
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 35.0 bits (79), Expect = 2e-04
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 5/70 (7%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
C+ EG + K K + E + + D G
Sbjct: 17 NNPTVLECIIEGNDQGVKYSWKK-----DGKSYNWQEHNAALRKDEGSLVFLRPQASDEG 71
Query: 63 YYECVADNPF 72
+Y+C A+ P
Sbjct: 72 HYQCFAETPA 81
>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma
constant domain 3, CH3-gamma {Mouse (Mus musculus),
gamma2 [TaxId: 10090]}
Length = 102
Score = 34.6 bits (79), Expect = 2e-04
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 1 MLGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ 58
M +++T CM F P ++ WT + +K + G+ + SK+ ++
Sbjct: 17 MTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNW 76
Query: 59 KDAGYYECVA 68
+ Y C
Sbjct: 77 VERNSYSCSV 86
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 34.3 bits (77), Expect = 3e-04
Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 3/73 (4%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTI---KSKMEIDPATQK 59
I C GF P + W T + + + S + T+K
Sbjct: 16 NESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRK 75
Query: 60 DAGYYECVADNPF 72
D G Y C+
Sbjct: 76 DNGEYTCMVSEEG 88
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 34.3 bits (77), Expect = 4e-04
Identities = 15/82 (18%), Positives = 21/82 (25%), Gaps = 3/82 (3%)
Query: 2 LGRKITFFCMAEGFPRPHITWT-KDDIELTFHKYFQVHEWFLG-NNTIKSKMEIDPATQK 59
G K C P P + L + + + S + I +
Sbjct: 20 HGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 79
Query: 60 -DAGYYECVADNPFAIDRRGFR 80
Y C A N F D R
Sbjct: 80 DFQTIYNCTAWNSFGSDTEIIR 101
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 33.0 bits (74), Expect = 6e-04
Identities = 13/75 (17%), Positives = 16/75 (21%), Gaps = 18/75 (24%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
+ T C A G P P + KD G
Sbjct: 19 NSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD------------------LEG 60
Query: 63 YYECVADNPFAIDRR 77
Y C A + R
Sbjct: 61 TYLCRARSTQGEVTR 75
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 33.5 bits (75), Expect = 8e-04
Identities = 18/85 (21%), Positives = 25/85 (29%), Gaps = 7/85 (8%)
Query: 3 GRKITFFCMAEGFP---RPHITWTKDDIELTFHKYFQVHEWF----LGNNTIKSKMEIDP 55
G ITF + +P I W K K + + + +M+I
Sbjct: 15 GEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIK 74
Query: 56 ATQKDAGYYECVADNPFAIDRRGFR 80
A AG Y C D F
Sbjct: 75 AKDNFAGNYRCEVTYKDKFDSCSFD 99
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 33.0 bits (74), Expect = 8e-04
Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G G P P TWT E + + + + A + D+G
Sbjct: 17 GFTHNLEVDFIGAPDPTATWTVG-----DSGAALAPELLVDAKSSTTSIFFPSAKRADSG 71
Query: 63 YYECVADNPFAIDRRGFR 80
Y+ N D F
Sbjct: 72 NYKLKVKNELGEDEAIFE 89
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 32.8 bits (73), Expect = 0.001
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKS---KMEIDPATQK 59
+ C GF P + W D + T + + + + T++
Sbjct: 19 NNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTRE 78
Query: 60 DAGYYECVADNPF 72
D G Y C+
Sbjct: 79 DTGTYTCMVSEEG 91
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 32.7 bits (74), Expect = 0.001
Identities = 10/70 (14%), Positives = 20/70 (28%), Gaps = 5/70 (7%)
Query: 2 LGRKITFFCMAEGFPRPHI--TWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQK 59
G+ C GF I K+ + ++ + + + E P
Sbjct: 18 NGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTP---T 74
Query: 60 DAGYYECVAD 69
+ Y C +
Sbjct: 75 EKDEYACRVN 84
>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 32.3 bits (73), Expect = 0.001
Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 1 MLGRKITFFCMAEGFPRPHIT--WTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPA 56
+ K T C+ F +T W D + NN S + + P
Sbjct: 18 LQANKATLVCLISDFYPGAVTVAWKADSSPVK-AGVETTTPSKQSNNKYAASSYLSLTPE 76
Query: 57 TQKDAGYYECVA 68
K Y C
Sbjct: 77 QWKSHRSYSCQV 88
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 32.1 bits (72), Expect = 0.002
Identities = 12/68 (17%), Positives = 16/68 (23%), Gaps = 6/68 (8%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G F P H W LT ++ E K + + G
Sbjct: 16 GETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDG-----KKHILILHNCQLGMTG 69
Query: 63 YYECVADN 70
A N
Sbjct: 70 EVSFQAAN 77
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 32.0 bits (71), Expect = 0.002
Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 6/70 (8%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G + C EG W ++E + LG +++
Sbjct: 17 GDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNR------K 70
Query: 63 YYECVADNPF 72
C A+N
Sbjct: 71 NVTCWAENDV 80
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 31.9 bits (72), Expect = 0.002
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 2 LGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPAT 57
LG+ T C+ + P +ITW + +T + +++ S + P
Sbjct: 18 LGQPNTLICLVDNIFPPVVNITWLSNGQSVT-EGVSETSFLSKSDHSFFKISYLTFLP-- 74
Query: 58 QKDAGYYECV 67
Y+C
Sbjct: 75 -SADEIYDCK 83
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.7 bits (71), Expect = 0.003
Identities = 13/77 (16%), Positives = 20/77 (25%), Gaps = 14/77 (18%)
Query: 2 LGRKITFFC------MAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDP 55
+ C E P + W KD L K ++ +
Sbjct: 13 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV--------KDRLIVMN 64
Query: 56 ATQKDAGYYECVADNPF 72
+K G Y C A +
Sbjct: 65 VAEKHRGNYTCHASYTY 81
>d1t7va1 b.1.1.2 (A:184-277) Zinc-alpha-2-glycoprotein, ZAG,
alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 31.2 bits (70), Expect = 0.004
Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 5/69 (7%)
Query: 1 MLGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ 58
G K C+A F + + WT+ V G + + P
Sbjct: 13 APGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQSWVVVAVPP--- 69
Query: 59 KDAGYYECV 67
+D Y C
Sbjct: 70 QDTAPYSCH 78
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 31.0 bits (69), Expect = 0.004
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 14/70 (20%)
Query: 3 GRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G I C + P +T+ ++ F + A +
Sbjct: 15 GETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSI-------------PQANHSHS 61
Query: 62 GYYECVADNP 71
G Y C +
Sbjct: 62 GDYHCTGNIG 71
>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}
Length = 100
Score = 31.2 bits (70), Expect = 0.005
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%)
Query: 2 LGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPAT 57
LG+ T C + P +ITW ++ + ++ + + + S + P
Sbjct: 16 LGQPNTLICFVDNIFPPVINITWLRNSKSVA-DGVYETSFFVNRDYSFHKLSYLTFIP-- 72
Query: 58 QKDAGYYECVAD 69
D Y+C +
Sbjct: 73 -SDDDIYDCKVE 83
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 30.0 bits (66), Expect = 0.013
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 2 LGRKITFFCMAE-GFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
+G F C I+W + E ++ + N+ S + I A D
Sbjct: 14 VGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVW--NDDDSSTLTIYNANIDD 71
Query: 61 AGYYECVADNPF 72
AG Y+CV
Sbjct: 72 AGIYKCVVTAED 83
>d1mjuh2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma
constant domain 1, CH1-gamma {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 29.7 bits (66), Expect = 0.015
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 3 GRKITFFCMAEGFPRPHIT--WTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
G +T C+ +G+ +T W + H + V + T+ S + + ++
Sbjct: 20 GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQ--SDLYTLSSSVTV-TSSTWP 76
Query: 61 AGYYECVADNP 71
+ C +P
Sbjct: 77 SQSITCNVAHP 87
>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 97
Score = 29.6 bits (66), Expect = 0.016
Identities = 8/31 (25%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 2 LGRKITFFCMAEGFPRPHI--TWTKDDIELT 30
L C F I W ++D E T
Sbjct: 15 LNHHNLLVCSVTDFYPGQIKVRWFRNDQEET 45
>d1hyrc1 b.1.1.2 (C:181-274) Class I MHC homolog, alpha-3 domain
{Human (Homo sapiens), Mic-a [TaxId: 9606]}
Length = 94
Score = 29.2 bits (65), Expect = 0.020
Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 7/69 (10%)
Query: 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPATQ 58
IT C A GF P ++W +D + L+ GN T I
Sbjct: 15 EGNITVTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQ--- 71
Query: 59 KDAGYYECV 67
+ + C
Sbjct: 72 GEEQRFTCY 80
>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal
domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}
Length = 101
Score = 29.2 bits (65), Expect = 0.022
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Query: 2 LGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPAT 57
LG C + F P ++TW ++ +T + ++ + P
Sbjct: 18 LGEPNILICFIDKFSPPVVNVTWLRNGRPVT-EGVSETVFLPRDDHLFRKFHYLTFLP-- 74
Query: 58 QKDAGYYECV 67
+Y+C
Sbjct: 75 -STDDFYDCE 83
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 29.2 bits (64), Expect = 0.024
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 6/71 (8%)
Query: 3 GRKITFFCMA-EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
G + F C +P W + F + + + I D
Sbjct: 19 GWGVMFTCSPPPHYPALSYRWLLN-----EFPNFIPADGRRFVSQTTGNLYIAKTEASDL 73
Query: 62 GYYECVADNPF 72
G Y C A +
Sbjct: 74 GNYSCFATSHI 84
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 28.7 bits (63), Expect = 0.026
Identities = 10/68 (14%), Positives = 18/68 (26%), Gaps = 14/68 (20%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
+T C P + T + + + I + T D+G
Sbjct: 20 KDSVTLKCQGAYSPEDNSTQ--------WFHNESLISSQASSYFIDAA------TVNDSG 65
Query: 63 YYECVADN 70
Y C +
Sbjct: 66 EYRCQTNL 73
>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 29.2 bits (65), Expect = 0.026
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 7/69 (10%)
Query: 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPATQ 58
T C A + P+ + W KD + ++ G+ T + + P
Sbjct: 15 SSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPP--- 71
Query: 59 KDAGYYECV 67
+ Y C
Sbjct: 72 GEEQRYTCQ 80
>d1fp5a1 b.1.1.2 (A:336-438) Immunoglobulin heavy chain epsilon
constant domain 3, CH3-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 29.2 bits (65), Expect = 0.026
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Query: 1 MLGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPA 56
+ + T C+ + + T + E N T + S + +
Sbjct: 14 FIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTR 73
Query: 57 TQKDAGYYECVADNP 71
+ Y+C +P
Sbjct: 74 DWIEGETYQCRVTHP 88
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 29.3 bits (64), Expect = 0.026
Identities = 15/77 (19%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Query: 3 GRKITFFC-MAEGFPRPHITWTKDDIELTFHK--YFQVHEWFLGNNTIKSKMEIDPATQK 59
GR C + +P+P ITW K + G + +
Sbjct: 17 GRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVS 76
Query: 60 DAGYYECVADNPFAIDR 76
D Y C A N +
Sbjct: 77 DIYKYVCTAKNAAVDEE 93
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 29.2 bits (64), Expect = 0.031
Identities = 9/67 (13%), Positives = 16/67 (23%), Gaps = 1/67 (1%)
Query: 6 ITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKS-KMEIDPATQKDAGYY 64
+ ++ KD +Y E + + I D G Y
Sbjct: 37 VGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGY 96
Query: 65 ECVADNP 71
C +
Sbjct: 97 TCFFRDH 103
>d1pfca_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant
domain 3, CH3-gamma {Guinea pig (Cavia porcellus)
[TaxId: 10141]}
Length = 111
Score = 28.8 bits (64), Expect = 0.032
Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 1 MLGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPA 56
+ +K++ CM GF P ++ W + Y F + + + S++++D
Sbjct: 25 LSKKKVSLTCMITGFYPADINVEWDSSEPS----DYKNTPPVFDTDGSFFLYSRLKVDTD 80
Query: 57 TQKDAGYYECVADNP 71
+ + C +
Sbjct: 81 AWNNGESFTCSVMHE 95
>d3frua1 b.1.1.2 (A:179-269) Fc (IgG) receptor, alpha-3 domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 28.8 bits (64), Expect = 0.035
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 6/67 (8%)
Query: 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
C A F P + ++ + G+ S +E+ D
Sbjct: 15 SGSSVLTCAAFSFYPPELKFRFLRNGLASG-SGNCSTGPNGDGSFHAWSLLEVKR---GD 70
Query: 61 AGYYECV 67
+Y+C
Sbjct: 71 EHHYQCQ 77
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 28.9 bits (64), Expect = 0.035
Identities = 7/50 (14%), Positives = 15/50 (30%), Gaps = 4/50 (8%)
Query: 17 RPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYEC 66
+ + + + + E N ++ + T KD G Y
Sbjct: 43 KEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQ----MITMKDMGVYTL 88
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 89
Score = 28.4 bits (63), Expect = 0.036
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 3 GRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYF 35
K+T C A GF P +TW + EL
Sbjct: 15 EDKVTLRCWALGFYPADITLTWQLNGEELIQDMEL 49
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 28.4 bits (63), Expect = 0.038
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 9/74 (12%)
Query: 2 LGRKITFFCMAEGF--PRPHITWTKDDIELTFHKYFQVHEWFLGNNT--IKSKMEIDPAT 57
G+ C F P I K+ ++ + + F + + I + E P
Sbjct: 17 NGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDM--SFSKDWSFYILAHTEFTP-- 72
Query: 58 QKDAGYYECVADNP 71
+ Y C +
Sbjct: 73 -TETDTYACRVKHD 85
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 28.4 bits (62), Expect = 0.051
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 19 HITWTKDDIELTFHKYFQVHEWFLGNNTIKSK--MEIDPATQKDAGYYECVADNPFAIDR 76
I ++ D I ++ + F N+ + + D G Y+C +
Sbjct: 56 IILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVAN 115
Query: 77 RGFR 80
+
Sbjct: 116 KKIH 119
>d1hdma1 b.1.1.2 (A:94-196) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 103
Score = 28.4 bits (63), Expect = 0.054
Identities = 9/71 (12%), Positives = 19/71 (26%), Gaps = 5/71 (7%)
Query: 1 MLGRKITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQ 58
G+ T C P + W + + V + S + P
Sbjct: 16 EFGKPNTLVCFVSNLFPPMLTVNWHDHSVPVEGFGPTFVSAVDGLSFQAFSYLNFTP--- 72
Query: 59 KDAGYYECVAD 69
+ + + C+
Sbjct: 73 EPSDIFSCIVT 83
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 28.1 bits (62), Expect = 0.056
Identities = 4/43 (9%), Positives = 9/43 (20%), Gaps = 2/43 (4%)
Query: 1 MLGRKITFFCMAEGFPRPHI--TWTKDDIELTFHKYFQVHEWF 41
++ C+ + F I F +
Sbjct: 11 VMKNGTNVACLVKEFYPKDIRINLVSSKKITEFDPAIVISPSG 53
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 27.2 bits (59), Expect = 0.14
Identities = 11/64 (17%), Positives = 18/64 (28%), Gaps = 4/64 (6%)
Query: 8 FFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67
+ + +T D+ + + N +I I D G YECV
Sbjct: 28 TRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIV----ILALRPSDEGTYECV 83
Query: 68 ADNP 71
Sbjct: 84 VLKY 87
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 26.9 bits (58), Expect = 0.15
Identities = 5/73 (6%), Positives = 10/73 (13%), Gaps = 15/73 (20%)
Query: 1 MLGRKITF-FCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQK 59
I W + ++
Sbjct: 14 PPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNV--------------TGVT 59
Query: 60 DAGYYECVADNPF 72
+ + C A N
Sbjct: 60 QSTMFSCEAHNLK 72
>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 26.9 bits (59), Expect = 0.16
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 3 GRKITFFCMAEGFPRPHI--TWTKDDIELTFHKYF 35
+ T C A GF I TW +D + T
Sbjct: 15 DHEATLRCWALGFYPAEITLTWQRDGEDQTQDTEL 49
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 26.8 bits (58), Expect = 0.16
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 13 EGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECVADNPF 72
+ ITW KD K E + K K+ PA +D+G+Y CV N
Sbjct: 28 PNEHKGTITWYKD-----DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS 82
Query: 73 AIDRR 77
R
Sbjct: 83 YCLRI 87
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 26.9 bits (58), Expect = 0.17
Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 8/69 (11%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G C + F E + + I ++ D+G
Sbjct: 12 GGTAELKCSQKSNLARVFWK--------FQNGVLKAESPKYGLMGRKNLLIFNLSEGDSG 63
Query: 63 YYECVADNP 71
Y+C+++
Sbjct: 64 VYQCLSEER 72
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 26.9 bits (59), Expect = 0.18
Identities = 10/71 (14%), Positives = 19/71 (26%), Gaps = 5/71 (7%)
Query: 2 LGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDA 61
L + C A T+ + + +++ + ID A
Sbjct: 20 LDGSVKIQCQAI-REAYLTQLMIIK-NSTYREIGRRLKFWNETDPEFV---IDHMDANKA 74
Query: 62 GYYECVADNPF 72
G Y+C
Sbjct: 75 GRYQCQYRIGH 85
>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal
domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}
Length = 98
Score = 26.5 bits (58), Expect = 0.22
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 2/30 (6%)
Query: 2 LGRKITFFCMAEGF--PRPHITWTKDDIEL 29
+ C GF ITW K+ +
Sbjct: 16 TREPVMLACYVWGFYPAEVTITWRKNGKLV 45
>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144,
alpha-3 domain {Murine cytomegalovirus [TaxId: 10366]}
Length = 98
Score = 26.6 bits (58), Expect = 0.23
Identities = 11/72 (15%), Positives = 16/72 (22%), Gaps = 10/72 (13%)
Query: 5 KITFFCMAEGF-PRP-HITWTKDDIELTFHKYFQVHEWFLGNNTIK-----SKMEIDPAT 57
+ C A + P I W KDD + + +D
Sbjct: 16 GMRLRCFARDYYPADLEIRWWKDDGGGGALPQTSKQHHDPLPSGNGLYQKHIDVYVDGG- 74
Query: 58 QKDAGYYECVAD 69
Y C
Sbjct: 75 --LEHVYSCRVK 84
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 26.2 bits (57), Expect = 0.27
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 4/75 (5%)
Query: 1 MLGRKITFFC--MAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSK--MEIDPA 56
LG I + W + + K G I + ++I
Sbjct: 8 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNL 67
Query: 57 TQKDAGYYECVADNP 71
T+ D+G Y +
Sbjct: 68 TRDDSGTYNVTVYST 82
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 26.1 bits (56), Expect = 0.33
Identities = 10/69 (14%), Positives = 16/69 (23%), Gaps = 12/69 (17%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G+ + C + Y + I AT +D+G
Sbjct: 15 GQPLFLRCHGWRNWDVY----------KVIYYKDGEALK--YWYENHNISITNATVEDSG 62
Query: 63 YYECVADNP 71
Y C
Sbjct: 63 TYYCTGKVW 71
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 26.0 bits (56), Expect = 0.47
Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Query: 6 ITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKS-KMEIDPATQKDAGYY 64
+ + K + F+ ++G+ + K + I D G +
Sbjct: 37 WRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTF 96
Query: 65 ECVADNPFAIDRRGFRT 81
C NP I + +
Sbjct: 97 TCDVKNPPDIVGKTSQV 113
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 25.4 bits (55), Expect = 0.66
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
G +T C ++ I + + E Q H + ++ + P +
Sbjct: 18 GGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPH----ARGSSRAIFSVGPVSPSRRW 73
Query: 63 YYEC 66
+Y C
Sbjct: 74 WYRC 77
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 25.2 bits (54), Expect = 0.80
Identities = 8/59 (13%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 9 FCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAGYYECV 67
F + + + + + H + F ++ + + KD G Y+C+
Sbjct: 32 FWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDS---WTLRLHNLQIKDKGLYQCI 87
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 24.6 bits (52), Expect = 1.3
Identities = 9/70 (12%), Positives = 13/70 (18%), Gaps = 14/70 (20%)
Query: 1 MLGRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKD 60
+ +T C P + L A D
Sbjct: 17 LQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHT--------------QPSYRFKANNND 62
Query: 61 AGYYECVADN 70
+G Y C
Sbjct: 63 SGEYTCQTGQ 72
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 23.8 bits (51), Expect = 2.1
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Query: 3 GRKITFFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKSKMEIDPATQKDAG 62
+ C ++ H ++ + + H K+ I TQ AG
Sbjct: 16 EETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHD----GVSKANFSISRMTQDLAG 70
Query: 63 YYEC 66
Y C
Sbjct: 71 TYRC 74
>d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 104
Score = 23.8 bits (51), Expect = 2.7
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 17 RPHITWTK--DDIELTFHKYFQVH-EWFLGNNTIKSKMEIDPATQKDAGYYECVADNPFA 73
RP++TW K I + Q++ W + + P D G Y C +
Sbjct: 33 RPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ 92
Query: 74 I 74
+
Sbjct: 93 V 93
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 23.6 bits (50), Expect = 3.0
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 7/77 (9%)
Query: 8 FFCMAEGFPRPHITWTKDDIELTFHKYFQVHEWFLGNNTIKS-KMEIDPATQKDAGYYEC 66
++ A ++ + + LG+ K+ + I A DAG Y
Sbjct: 41 YWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFF 100
Query: 67 VADNPFAIDRRGFRTDY 83
+++ + +Y
Sbjct: 101 ------RMEKGNIKWNY 111
>d1au1a_ a.26.1.3 (A:) Interferon-beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 23.2 bits (50), Expect = 4.6
Identities = 5/27 (18%), Positives = 9/27 (33%)
Query: 10 CMAEGFPRPHITWTKDDIELTFHKYFQ 36
+ E + T K L +Y+
Sbjct: 101 VLEEKLEKEDFTRGKLMSSLHLKRYYG 127
>gi|114623914|ref|XP_001152006.1|(29-183:189) PREDICTED: similar to
Interferon alpha-16 precursor (Interferon alpha-WA) [Pan
troglodytes] E=4e-75 s/c=1.83 id=88% cov=101%
Length = 155
Score = 22.5 bits (48), Expect = 8.0
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 10 CMAEGFPRPHITWTKDDIELTFHKYFQ 36
C+ + +D L KYFQ
Sbjct: 94 CVIQEVGVEETPLMNEDSILAVRKYFQ 120
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.142 0.473
Gapped
Lambda K H
0.267 0.0569 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 346,628
Number of extensions: 13791
Number of successful extensions: 150
Number of sequences better than 10.0: 1
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 96
Length of query: 83
Length of database: 2,407,596
Length adjustment: 49
Effective length of query: 34
Effective length of database: 1,734,826
Effective search space: 58984084
Effective search space used: 58984084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.2 bits)